BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780954|ref|YP_003065367.1| hypothetical protein CLIBASIA_04265 [Candidatus Liberibacter asiaticus str. psy62] (380 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|254780954|ref|YP_003065367.1| hypothetical protein CLIBASIA_04265 [Candidatus Liberibacter asiaticus str. psy62] gi|254040631|gb|ACT57427.1| hypothetical protein CLIBASIA_04265 [Candidatus Liberibacter asiaticus str. psy62] Length = 380 Score = 297 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 380/380 (100%), Positives = 380/380 (100%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP Sbjct: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG Sbjct: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL Sbjct: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW Sbjct: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD Sbjct: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 Query: 301 EDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEE 360 EDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEE Sbjct: 301 EDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEE 360 Query: 361 KDNSHDKENQENFSGDKMIL 380 KDNSHDKENQENFSGDKMIL Sbjct: 361 KDNSHDKENQENFSGDKMIL 380 >gi|13471495|ref|NP_103061.1| hypothetical protein mll1482 [Mesorhizobium loti MAFF303099] gi|14022237|dbj|BAB48847.1| mll1482 [Mesorhizobium loti MAFF303099] Length = 1341 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 94/339 (27%), Positives = 161/339 (47%), Gaps = 23/339 (6%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 ML R+ + G LF +VL A VP F+DWT +R +FER+A+ I+G+K+ V+G +LP Sbjct: 1 MLARLFVIFGGLFVLVLCAALVVPYFVDWTGYRAEFEREASAILGRKVTVQGDATARLLP 60 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 FPSV F ++ + +G +E SM AE P L GE+ +FDM + P +++ G Sbjct: 61 FPSVTFSNVAVAGGPNGQPAMTVETFSMDAELAPFLRGEVLIFDMRLVHPKATIDIANDG 120 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 +W R S+ ++ + +EK+ V G+I++ + + S++N S + Sbjct: 121 TVDWAMRPSSPFDLNQISIEKLTVTEGQIELRHAAGGRSHIFSEIN-----------STI 169 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 S S+ G +GT D R+ + N + L+++ P AYP++I+ GN Sbjct: 170 SAKSLAGPWRLDGTLRLDGLRTTVAASTGKAEGNGQMRLRLKADPDAYPLVIETDGNAGI 229 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLEL--------SAKKS----RLSGNFKISDGNVRISRY 288 + +YSG F ++G L SA K RL+G F + + + + Sbjct: 230 VKGAAVYSGQFKISGADKNSAQLRGTDGETVKVSAGKPDPGFRLNGKFSLDHQKLGVDEF 289 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + ++ ++ D K V ++ NGA+ D Sbjct: 290 RFETGPLDNPYTADGKASVDLGQKPNFAIEANGAQVQFD 328 >gi|260462142|ref|ZP_05810386.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075] gi|259032002|gb|EEW33269.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075] Length = 1326 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 91/339 (26%), Positives = 158/339 (46%), Gaps = 23/339 (6%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 ML R+ + G LF +VL A VP FIDWT +R DFER+A+ I+G+K+ V+G +LP Sbjct: 1 MLARLFVIFGGLFVLVLCAALVVPYFIDWTGYRTDFEREASAILGRKVTVQGDATARLLP 60 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 FPSV F ++ + +G +E SM AE P L GE+ +FDM + +P ++ G Sbjct: 61 FPSVTFSNVAVAGGPNGEPAMTVETFSMDAELAPFLRGEVLIFDMRLVRPKATIDIARDG 120 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 +W R S+ + +EK+ V G+I++ + + S++N S + Sbjct: 121 TVDWAMRPSSPFNPSQISIEKLTVTEGQIELRHAAGGRSHIFSEIN-----------STI 169 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 S S+ G +GT D R+ + + + ++++ P AYP++I+ GN Sbjct: 170 SAKSLAGPWRLDGTLRLDGLRTTVAASTGKAEPSGQMRIRLKADPDAYPLVIETDGNAGI 229 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS------------RLSGNFKISDGNVRISRY 288 +YSG F ++G L + ++ RL+G F + + + + Sbjct: 230 VNGAAVYSGQFKISGADKNSAELRGTDGETVKVSTGKPDPGFRLNGKFSLDHQKLGVDEF 289 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + ++ ++ D K V ++ NGA+ D Sbjct: 290 RFETGPLDNPYTADGKASVDLGQKPSFAIEANGAQVQFD 328 >gi|319782902|ref|YP_004142378.1| hypothetical protein Mesci_3204 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168790|gb|ADV12328.1| hypothetical protein Mesci_3204 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 1319 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 95/339 (28%), Positives = 158/339 (46%), Gaps = 23/339 (6%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 ML R+ + G LF +VL A VP FIDWT +R DFER+A+ I+G+K+ V+G +LP Sbjct: 1 MLARLFVIFGGLFVLVLCAALVVPYFIDWTGYRADFEREASAILGRKVTVQGDATARLLP 60 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 FPSV F ++ + +G +E SM AE P L GE+ +FDM + +P +++ G Sbjct: 61 FPSVTFSNVAVAGGTNGQPAMTVETFSMDAELAPFLRGEVLIFDMRLVRPKATIDIANDG 120 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 +W R S+ + +EK+ V G+I++ + + S++N S + Sbjct: 121 TVDWAIRPSSPFDPSQISIEKLTVTEGQIEVRHAAGGRSHLFSEIN-----------STV 169 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 S S+ G +GT D R+A + + + +++ P AYP++I+ GN Sbjct: 170 SAKSLAGPWRMDGTLRLDGLRTAVTASTGKAEGSGQMRFRLKADPDAYPLVIETDGNAGI 229 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLEL--------SAKKS----RLSGNFKISDGNVRISRY 288 +YSG F ++G L SA K RL+G F + + + + Sbjct: 230 VNGAAVYSGQFKISGADKNSAELRGTDGETVKVSAGKPDPGFRLNGKFSLDHQKLGVDEF 289 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + ++ ++ D K V + NGA+ D Sbjct: 290 RFETGPLDNPYTADGKASVDLGLKPSFAIEANGAQVQFD 328 >gi|110634334|ref|YP_674542.1| AsmA [Mesorhizobium sp. BNC1] gi|110285318|gb|ABG63377.1| AsmA [Chelativorans sp. BNC1] Length = 1273 Score = 234 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 88/330 (26%), Positives = 151/330 (45%), Gaps = 16/330 (4%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67 +G L +VL A P FIDWT +R FER+A+ I+G+++ V+G + +LPFPSV F Sbjct: 2 IIGGLVVLVLTAALVAPYFIDWTSYRAAFEREASRILGREVRVEGTARARLLPFPSVTFT 61 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127 D+ + E G ++ SM AE P L GE+ +FDM + +P + ++S G +W R Sbjct: 62 DVVVAGAEPGDPAMTVDEFSMDAELAPFLRGELLIFDMRLVRPSASIEIASTGQVDWAVR 121 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187 S+ + LE + V G I ++ S + LS++N S +S S+ G Sbjct: 122 PSSPFDPSQIRLEGVTVSAGTITVLQHASGRTVTLSNIN-----------SEISARSLAG 170 Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 GT + + A + A+ ++I P YP++I+ G +++Q Y Sbjct: 171 PWRVTGTLQVNGLPVTLTASTGT-ASDGAMRVRISAQPRDYPVLIETDGEARLDQEQGRY 229 Query: 248 SGVFSVAGDFSKLLNLELSAKK----SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 SG F E SA +R++G F + + I ++ Q+ ++ D Sbjct: 230 SGTFRFVNANPSEEAQEASAAAVNPGNRVAGRFSLDHQRLAIDEFRFQTGPEDAPYTADG 289 Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDF 333 V + + +GA+ D ++ + Sbjct: 290 TAAVDFGANPSFSVTADGAQIRLDESQAEA 319 >gi|153009099|ref|YP_001370314.1| AsmA family protein [Ochrobactrum anthropi ATCC 49188] gi|151560987|gb|ABS14485.1| AsmA family protein [Ochrobactrum anthropi ATCC 49188] Length = 1278 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 84/352 (23%), Positives = 161/352 (45%), Gaps = 20/352 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G LF ++L A VP F+DW+ +R DFER+A+ ++G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLFVLLLTAALVVPPFVDWSGYRADFEREASRVLGRPVKVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +D+P + L G Sbjct: 61 PSVAFSDVRV-GPDAAHPVMTVDTFSMDAELMPFLRGQLLIFDMRVDRPQVTISLDKSGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + LE++ V G I + ++ S + + ++L+ ISA Sbjct: 120 VDWAIRPSTPLDPTKIRLERLSVSDGTITLREEASGRSHTATELDAVISA---------- 169 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +T+ + ++ ++ ++ P A P + G++ Sbjct: 170 -NSLAGPWQANGSLVLQGEKLAIDLTSGEAKPDGSLRVRARISPKAIPATFETDGDVTVT 228 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKK--------SRLSGNFKISDGNVRISRYKLQSI 293 E + Y+G FS+ + R++G FK S ++++ Sbjct: 229 EGRLDYAGDFSLRSSDMVAKTTKDQKTPTETPFFSGVRVTGQFKADRNRFDASEFRMEQG 288 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ + K + ++ S +G + NE E+ D Sbjct: 289 PADNPYVVNGKAFIDYGDKPRFEVSADGQQLFWGPNEAASEEQSGSVMPVAD 340 >gi|254702130|ref|ZP_05163958.1| hypothetical protein Bsuib55_14899 [Brucella suis bv. 5 str. 513] Length = 658 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338 >gi|86358407|ref|YP_470299.1| hypothetical protein RHE_CH02803 [Rhizobium etli CFN 42] gi|86282509|gb|ABC91572.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 1236 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 101/327 (30%), Positives = 164/327 (50%), Gaps = 12/327 (3%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M+ R L+ LG + VVL A PLFIDWTDFR++FE QA+ I+GKK+ V G + +LP Sbjct: 1 MVGRFLVFLGGVIVVVLFVALLAPLFIDWTDFRKNFEDQASRIIGKKVTVHGTVDARLLP 60 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 FPSV D+R+ Q+ DG+ K+E SM AE P LSGE +FDM + P + L G Sbjct: 61 FPSVTLHDVRVGQEADGTPIVKVEQFSMDAELAPFLSGEALIFDMRVVNPKVRLRLLKDG 120 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 +W + V+LE +HV GG I +D +S + ++ LN ++SA+ Sbjct: 121 TLDWMRGSRAEIPAKTVVLENVHVSGGEIDFLDDQSGRARRITGLNAEMSAK-------- 172 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 S+ G EG D + F I+++ P + + ++ +L P +P+ IDL G L Sbjct: 173 ---SLAGPWRVEGDAALDGEHGNFSISSSQPDEKGVLRMRTKLSPDKHPVSIDLDGELKL 229 Query: 241 NEKQPIYSGVFSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 +++P Y G S A + + + + RL G F++++ +RI Y+++ + Sbjct: 230 VDRKPNYQGQLSAAIESGNSARSANKNEQPPRLKGRFELTNERIRIPEYRMEIGPTDDPY 289 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMH 326 + + + +G + Sbjct: 290 VITGEATLDTGNAPEFLLTADGQQIDV 316 >gi|116253003|ref|YP_768841.1| hypothetical protein RL3260 [Rhizobium leguminosarum bv. viciae 3841] gi|115257651|emb|CAK08748.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 1238 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 99/327 (30%), Positives = 162/327 (49%), Gaps = 12/327 (3%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M+ R L+ LG + VVL A PLFIDWTDFR++FE QA+ I+GKK+ V G + +LP Sbjct: 1 MVGRFLVFLGGVIVVVLFVALLAPLFIDWTDFRKNFEDQASRIIGKKVTVYGTVDARLLP 60 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 FPSV D+R+ Q+ DG+ K+E SM AE P LSGE +FDM + P + L G Sbjct: 61 FPSVTLHDVRVGQEADGTPIVKVEQFSMDAELAPFLSGEALIFDMRVVNPKVRLRLLKDG 120 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 +W + V+LE +HV GG ++ ID +S + ++ LN ++SA+ Sbjct: 121 TLDWMRGSRAEIPARTVVLENVHVSGGEVEFIDDQSGRSRRITGLNAEMSAK-------- 172 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 S+ G EG D + F I+++ P + + ++ +L P +P+ +DL G L Sbjct: 173 ---SLAGPWRIEGDAALDGEHGGFSISSSQPDEKGVLRMRTRLSPDKHPVSVDLDGELKL 229 Query: 241 NEKQPIYSGVFSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 + +P Y G S A + + R+ G F++++ +RI Y+++ + Sbjct: 230 VDSKPNYQGQLSAAVEIRNSAKPANKKEQPPRVKGRFELTNERIRIPEYRMEIGPTDDPY 289 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMH 326 + + + +G + Sbjct: 290 VITGEATLDTGNSPEFLLTADGQQIDV 316 >gi|241205510|ref|YP_002976606.1| hypothetical protein Rleg_2806 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859400|gb|ACS57067.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 1238 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 12/327 (3%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M+ R L+ LG + VVL A PLFIDWTDFR++FE QA+ I+GKK+ V G + +LP Sbjct: 1 MVGRFLVFLGGVIVVVLFVALLAPLFIDWTDFRKNFEDQASRIIGKKVTVYGTVDARLLP 60 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 FPSV D+R+ Q+ DG+ K+E SM AE P LSGE +FDM I P + L G Sbjct: 61 FPSVTLHDVRVGQEADGTPIVKVEQFSMDAELAPFLSGEALIFDMRIVNPKVRLRLLKDG 120 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 +W + V+LE +HV GG ++ ID +S + ++ LN ++SA+ Sbjct: 121 TLDWMRGSRAEIPARTVVLENVHVSGGEVEFIDDQSGRSRRITGLNAEMSAK-------- 172 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 S+ G EG D + F I+++ P + + ++ +L P +P+ +DL G L Sbjct: 173 ---SLAGPWRIEGDAALDGEHGGFSISSSQPDEKGVLRMRTRLSPDKHPVSVDLDGELKL 229 Query: 241 NEKQPIYSGVFSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 + +P Y G S A + + R+ G F++++ +RI Y+++ + Sbjct: 230 VDSKPNYQGQLSAAIEIRNSAKPANKKEQPPRVKGRFELTNERIRIPEYRMEIGPTDDPY 289 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMH 326 + + + +G + Sbjct: 290 VITGEATLDTGNAPEFLLTADGQQIDV 316 >gi|209550129|ref|YP_002282046.1| hypothetical protein Rleg2_2547 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535885|gb|ACI55820.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 1234 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 105/351 (29%), Positives = 172/351 (49%), Gaps = 14/351 (3%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M+ R L+ LG + VVL A PLFIDWTDFR++FE QA+ I+GKK+ V G + +LP Sbjct: 1 MVGRFLVFLGGVIVVVLFVALLAPLFIDWTDFRKNFEDQASRIIGKKVTVYGTVDARLLP 60 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 FPSV D+R+ Q+ DG+ K+E SM AE P LSGE +FDM + P + L G Sbjct: 61 FPSVTLHDVRVGQEADGTPIVKVEQFSMDAELAPFLSGEALIFDMRVVNPKVRLRLLKDG 120 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 +W + NV+LE +HV GG ++ ID +S + ++ LN ++SA+ Sbjct: 121 TLDWMRGSRAEIPAKNVVLENVHVNGGEVEFIDDQSGRSRRITGLNAEMSAK-------- 172 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 S+ G EG D + +F I+++ P + + ++ +L P +P+ IDL G L Sbjct: 173 ---SLAGPWRIEGNAALDGEHGSFLISSSQPDEKGVLRMRTKLSPDKHPVSIDLDGELKL 229 Query: 241 NEKQPIYSGVFSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 + +P Y G S A + + R+ G F++++ +RI Y+++ + Sbjct: 230 VDSKPNYQGQLSAAIESGNSAKPANKKEQPPRVKGRFELTNERIRIPEYRMEIGPTDDPY 289 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350 + + + +G + D+N E K ++ + Sbjct: 290 VITGEATLDTGNAPEFLLTADGQQI--DVNRIGNQGEAGKTTRDPAVSARQ 338 >gi|190892532|ref|YP_001979074.1| hypothetical protein RHECIAT_CH0002947 [Rhizobium etli CIAT 652] gi|190697811|gb|ACE91896.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 1234 Score = 227 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 98/327 (29%), Positives = 164/327 (50%), Gaps = 12/327 (3%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M+ R L+ LG + V L A PLFIDWTDFR++FE QA+ I+GKK+ V G + +LP Sbjct: 1 MVGRFLVFLGGVIVVALFVALLAPLFIDWTDFRKNFEDQASRIIGKKVTVHGTVDARLLP 60 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 FPSV D+R+ Q+ DG+ ++E SM AE P LSGE +FDM + P + L G Sbjct: 61 FPSVTLHDVRVGQEADGTPIVRVEQFSMDAELAPFLSGEALIFDMRVVNPKVRLRLLKDG 120 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 +W + V+LE +HV GG ++ ID +S + ++ LN ++SA+ Sbjct: 121 TLDWMRGSRAEIPAKTVVLENVHVSGGEVEFIDDQSGRGRRITGLNAEMSAK-------- 172 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 S+ G EG D + F I+++ P + + ++ +L P +P+ IDL G L Sbjct: 173 ---SLAGPWRIEGDAALDGEHGNFSISSSQPDEKGVLHMRTKLSPDKHPVNIDLDGELKL 229 Query: 241 NEKQPIYSGVFSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 +++P Y G S A + + + + R+ G F++++ +RI Y+++ + Sbjct: 230 VDRKPNYQGQLSAAIEHRNSAKSANKNEQPPRVKGRFELTNERIRIPEYRMEIGPTDDPY 289 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMH 326 + + + +G + Sbjct: 290 VITGEATLDTGNAPEFLLTADGQQIDV 316 >gi|227822606|ref|YP_002826578.1| hypothetical protein NGR_c20620 [Sinorhizobium fredii NGR234] gi|227341607|gb|ACP25825.1| hypothetical protein NGR_c20620 [Sinorhizobium fredii NGR234] Length = 1247 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 91/347 (26%), Positives = 168/347 (48%), Gaps = 13/347 (3%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 ML R+ + +G L + L A PLFI+WTDFR DFER+A+ I+GK + V G + ++P Sbjct: 1 MLARIFVIIGGLLVIALFVALIAPLFINWTDFRTDFEREASRIMGKPVVVHGSVDARLIP 60 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 FP+V D+R+ + G ++ SM AE P LSGE +FDM +D+P L G Sbjct: 61 FPTVTLNDVRVGAEAGGEPLIQVAQFSMSAELAPFLSGEALIFDMRLDRPKAKLRLQPDG 120 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 +W + + V+LE + + G I+ +D+++ + +S+L+ +SAR Sbjct: 121 TLDWARGPRAAIPANTVVLENVEIADGEIEFVDEQTGRTRRVSELSADVSAR-------- 172 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 S+ G +G+ D + +F T+N + A+SL+ +L P P ++L G L Sbjct: 173 ---SLAGPWKVDGSAALDGEAGSFSFTSNTVDEEGALSLRARLTPDERPFGVELDGELKV 229 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 + +P+Y+G F++ + A R++G F++++ ++R+ Y ++ P+ Sbjct: 230 VDFRPVYAGRFTLTENRPAEEVRSGGA--LRINGQFQLTNESIRVPEYHFEAGPPDDPYI 287 Query: 301 EDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347 + + ++ +G + + +N L+ Sbjct: 288 ITGEATLDTGKDQKFLLIADGQQIDVSRIGNSGRGGKTGRNPTVSLR 334 >gi|150397231|ref|YP_001327698.1| hypothetical protein Smed_2030 [Sinorhizobium medicae WSM419] gi|150028746|gb|ABR60863.1| conserved hypothetical protein [Sinorhizobium medicae WSM419] Length = 1246 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 98/347 (28%), Positives = 170/347 (48%), Gaps = 13/347 (3%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 ML R+L+ LG L V L A PLFIDWT FR DFER+A+ I+GK + V G + ++P Sbjct: 1 MLARILVTLGGLLVVALFAALIAPLFIDWTSFRNDFEREASRIMGKPVVVHGSVDARLIP 60 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 FP+V D+R+ + G ++ SM AE P LSGE +FDM +D+P L G Sbjct: 61 FPTVTLNDVRVGSSDGGPPLIQVAQFSMSAELAPFLSGEALIFDMRLDRPKARIRLQPDG 120 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 +W + T H VILEK+ + G I+ +D+++ + +SDL+ + L Sbjct: 121 TLDWARGSRTAIPAHTVILEKVEIADGEIEFVDEQTGRTRRVSDLS-----------ADL 169 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 S ++ G AEG D + +F T+N + A+SL+ +L P P ++L G+L Sbjct: 170 SARTLAGPWRAEGRAALDGEVGSFSFTSNAVDETGALSLRARLVPDERPFGVELDGSLKV 229 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 + +P+Y+G F++ + N + R++G F++++ ++R+ Y + P+ Sbjct: 230 VDFRPVYAGRFTLTENRP--ANEVKADGALRINGEFQLTNESIRVPEYHFEIGPPDDPYI 287 Query: 301 EDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347 + + ++ +G + + ++ L+ Sbjct: 288 VTGEATLDTGKDQRFLLIADGQQIDVSRIGNSGSSGKTGRDPAISLR 334 >gi|15889338|ref|NP_355019.1| hypothetical protein Atu2052 [Agrobacterium tumefaciens str. C58] gi|15157178|gb|AAK87804.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 1234 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 101/361 (27%), Positives = 176/361 (48%), Gaps = 16/361 (4%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 ML R+L+ LG L ++VL A +P F+DWTDFR DFE QA+ I+GKK+ V G ++ +LP Sbjct: 1 MLGRILVFLGGLLALVLFSALLIPYFVDWTDFRRDFEDQASRILGKKVVVHGRVEARLLP 60 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 FPSV D+R DGS ++ SM AE P LSGE R+FDM I++P L G Sbjct: 61 FPSVTLHDVRAGTDADGSPLIQVARFSMDAELAPFLSGEARIFDMRIEEPKAKIRLLKDG 120 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 +W + V+LE + ++GG+I+ ID++S + ++ LN + + Sbjct: 121 TLDWMRGSRAEIPARTVVLESVQIEGGQIEFIDEQSGRNRVVTGLN-----------ADM 169 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFP-AKNKAISLKIQLFPLAYPIIIDLFGNLF 239 S +S+ G AEG D +F ++++ P N + L+++L P +P+ +DL G + Sbjct: 170 SANSLAGPWKAEGRAAVDGHPGSFSLSSSEPDYANGRMGLRLRLVPDEHPVEVDLDGAIA 229 Query: 240 WNEKQPIYSGVFSVA---GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 +P YSG FS + + K + R G+F++++ +VRI Y+++ Sbjct: 230 ATAGKPAYSGSFSFSFREDEKQKQQAGQSLFSSPRTRGSFELTNESVRIPSYRMELGASE 289 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEE-EKKNKNDDLKKDDIQYSV 355 + + + + + +G + + + +++ ++ Sbjct: 290 NPYIVTGEATLDTGAKPEFLLTADGQQIDVARFAPPVVQTGKTSRQPTVSVRQRVEAFAA 349 Query: 356 N 356 Sbjct: 350 M 350 >gi|325293421|ref|YP_004279285.1| hypothetical protein AGROH133_07317 [Agrobacterium sp. H13-3] gi|325061274|gb|ADY64965.1| hypothetical protein AGROH133_07317 [Agrobacterium sp. H13-3] Length = 1243 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 101/346 (29%), Positives = 172/346 (49%), Gaps = 15/346 (4%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 ML R+L+ LG L +VVL A +P F+DWTDFR DFE QA+ I+GKK+ V G ++ +LP Sbjct: 1 MLGRILVFLGGLLAVVLFSALLIPYFVDWTDFRRDFEDQASRILGKKVVVHGRVEARLLP 60 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 FPSV D+R DGS ++ SM AE P LSGE R+FDM I++P L G Sbjct: 61 FPSVTLHDVRAGTDADGSPLIQVARFSMDAELAPFLSGEARIFDMRIEEPKAKIRLLKDG 120 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 +W + V+LE + ++GG+I+ ID++S + ++ LN + + Sbjct: 121 TLDWMRGSRAEIPARTVVLESVQIEGGQIEFIDEQSGRNRVVTGLN-----------ADM 169 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFP-AKNKAISLKIQLFPLAYPIIIDLFGNLF 239 S +S+ G AEG D +F ++++ P N + L+I++ P +P+ +DL G + Sbjct: 170 SANSLAGPWKAEGRAAVDGHPGSFSLSSSEPDYANGRMGLRIRVVPDEHPVEVDLDGAIA 229 Query: 240 WNEKQPIYSGVFSVA---GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 +P YSG F+ + K + R G+F++++ +VRI Y+++ Sbjct: 230 ATAGKPAYSGSFAFSFREDQKQKQQAGQSLFSSPRTRGSFELTNESVRIPSYRMELGGNE 289 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342 + + + + + +G + + + + + Sbjct: 290 NPYVVTGEATLDTGAKPEFLLTADGQQIDVNRFAPPVVQTGKTSRQ 335 >gi|306839218|ref|ZP_07472035.1| AsmA family protein [Brucella sp. NF 2653] gi|306405765|gb|EFM62027.1| AsmA family protein [Brucella sp. NF 2653] Length = 1247 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 81/350 (23%), Positives = 159/350 (45%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R S + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSMPLDPTKIRVERLSINDGAVTLREEASGRSDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P + G++ Sbjct: 169 ANSLAGPWQANGSFMLRGEKFAIDVSSGEAKPDGVLRVRARVSPDGFPATFETDGDVTMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ + + + S +G + NET E+ D Sbjct: 289 DNPYVVNGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338 >gi|254719441|ref|ZP_05181252.1| hypothetical protein Bru83_07838 [Brucella sp. 83/13] Length = 1247 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 81/350 (23%), Positives = 159/350 (45%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R S + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSMPLDPTKIRVERLSINDGAVTLREEASGRSDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P + G++ Sbjct: 169 ANSLAGPWQANGSFMLRGEKFAIDVSSGEAKPDGVLRVRARVSPDGFPATFETDGDVTMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ + + + S +G + NET E+ D Sbjct: 289 DNPYVVNGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338 >gi|256045039|ref|ZP_05447940.1| hypothetical protein Bmelb1R_11154 [Brucella melitensis bv. 1 str. Rev.1] Length = 1247 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G I +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDISARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338 >gi|326409432|gb|ADZ66497.1| AsmA family protein [Brucella melitensis M28] gi|326539138|gb|ADZ87353.1| AsmA family protein [Brucella melitensis M5-90] Length = 1247 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338 >gi|23502279|ref|NP_698406.1| hypothetical protein BR1408 [Brucella suis 1330] gi|23348253|gb|AAN30321.1| conserved hypothetical protein [Brucella suis 1330] Length = 1247 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 83/350 (23%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + + +G + NET E+ D Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVNADGQQLFWGPNETAGEEQSVSAMPIAD 338 >gi|254710451|ref|ZP_05172262.1| hypothetical protein BpinB_09332 [Brucella pinnipedialis B2/94] gi|254714444|ref|ZP_05176255.1| hypothetical protein BcetM6_14113 [Brucella ceti M644/93/1] gi|254717342|ref|ZP_05179153.1| hypothetical protein BcetM_13242 [Brucella ceti M13/05/1] gi|256031945|ref|ZP_05445559.1| hypothetical protein BpinM2_15104 [Brucella pinnipedialis M292/94/1] gi|256160143|ref|ZP_05457837.1| hypothetical protein BcetM4_14114 [Brucella ceti M490/95/1] gi|256255349|ref|ZP_05460885.1| hypothetical protein BcetB_13884 [Brucella ceti B1/94] Length = 1247 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338 >gi|163843663|ref|YP_001628067.1| AsmA family protein [Brucella suis ATCC 23445] gi|163674386|gb|ABY38497.1| AsmA family protein [Brucella suis ATCC 23445] Length = 1247 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338 >gi|260169081|ref|ZP_05755892.1| AsmA family protein, involved in outer membrane biogenesis [Brucella sp. F5/99] Length = 1247 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338 >gi|256061466|ref|ZP_05451610.1| hypothetical protein Bneo5_14020 [Brucella neotomae 5K33] Length = 1247 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338 >gi|256369824|ref|YP_003107335.1| AsmA family protein, involved in outer membrane biogenesis [Brucella microti CCM 4915] gi|255999987|gb|ACU48386.1| AsmA family protein, involved in outer membrane biogenesis [Brucella microti CCM 4915] Length = 1247 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338 >gi|294852735|ref|ZP_06793408.1| hypothetical protein BAZG_01667 [Brucella sp. NVSL 07-0026] gi|294821324|gb|EFG38323.1| hypothetical protein BAZG_01667 [Brucella sp. NVSL 07-0026] Length = 1247 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRFDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338 >gi|254708081|ref|ZP_05169909.1| Alpha-isopropylmalate/homocitrate synthase [Brucella pinnipedialis M163/99/10] Length = 1247 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338 >gi|306844307|ref|ZP_07476899.1| Alpha-isopropylmalate/homocitrate synthase [Brucella sp. BO1] gi|306275379|gb|EFM57120.1| Alpha-isopropylmalate/homocitrate synthase [Brucella sp. BO1] Length = 1247 Score = 212 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 82/350 (23%), Positives = 159/350 (45%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGHPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSTPLDPTKIRVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P + G++ Sbjct: 169 ANSLAGPWQANGSFMLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPATFETDGDVTMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ + + + S +G + NET E+ D Sbjct: 289 DNPYVVNGSALIDYGTKPHFEVSADGQQLFWGPNETAGEEQSVSTMPIAD 338 >gi|254704666|ref|ZP_05166494.1| AsmA family protein [Brucella suis bv. 3 str. 686] Length = 1247 Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 83/350 (23%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRNDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + + +G + NET E+ D Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVNADGQQLFWGPNETAGEEQSVSAMPIAD 338 >gi|265984445|ref|ZP_06097180.1| AsmA family protein [Brucella sp. 83/13] gi|264663037|gb|EEZ33298.1| AsmA family protein [Brucella sp. 83/13] Length = 1254 Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 82/350 (23%), Positives = 159/350 (45%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 8 LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 68 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R S + +E++ + G + + ++ S + S LN LS Sbjct: 127 VDWAIRPSMPLDPTKIRVERLSINDGAVTLREEASGRSDTASALNAV-----------LS 175 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P + G++ Sbjct: 176 ANSLAGPWQANGSFMLRGEKFAIDVSSGEAKPDGVLRVRARVSPDGFPATFETDGDVTMT 235 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ + + + S +G + NET E+ D Sbjct: 296 DNPYVVNGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 345 >gi|161619356|ref|YP_001593243.1| AsmA family protein [Brucella canis ATCC 23365] gi|161336167|gb|ABX62472.1| AsmA family protein [Brucella canis ATCC 23365] Length = 1247 Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 83/350 (23%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRNDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + + +G + NET E+ D Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVNADGQQLFWGPNETAGEEQSVSAMPIAD 338 >gi|225852890|ref|YP_002733123.1| AsmA family protein [Brucella melitensis ATCC 23457] gi|225641255|gb|ACO01169.1| AsmA family protein [Brucella melitensis ATCC 23457] Length = 1247 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 162/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK + +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADREHFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338 >gi|256113962|ref|ZP_05454745.1| hypothetical protein Bmelb3E_14355 [Brucella melitensis bv. 3 str. Ether] Length = 1247 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 83/350 (23%), Positives = 160/350 (45%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM E +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDTELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEEKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338 >gi|62290301|ref|YP_222094.1| hypothetical protein BruAb1_1403 [Brucella abortus bv. 1 str. 9-941] gi|82700225|ref|YP_414799.1| alpha-isopropylmalate/homocitrate synthase AsmA [Brucella melitensis biovar Abortus 2308] gi|189024535|ref|YP_001935303.1| Alpha-isopropylmalate/homocitrate synthase [Brucella abortus S19] gi|254689603|ref|ZP_05152857.1| Alpha-isopropylmalate/homocitrate synthase [Brucella abortus bv. 6 str. 870] gi|254697745|ref|ZP_05159573.1| Alpha-isopropylmalate/homocitrate synthase [Brucella abortus bv. 2 str. 86/8/59] gi|254730634|ref|ZP_05189212.1| Alpha-isopropylmalate/homocitrate synthase [Brucella abortus bv. 4 str. 292] gi|256257852|ref|ZP_05463388.1| Alpha-isopropylmalate/homocitrate synthase [Brucella abortus bv. 9 str. C68] gi|297248689|ref|ZP_06932407.1| alpha-isopropylmalate/homocitrate synthase:AsmA [Brucella abortus bv. 5 str. B3196] gi|62196433|gb|AAX74733.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941] gi|82616326|emb|CAJ11383.1| Alpha-isopropylmalate/homocitrate synthase:AsmA [Brucella melitensis biovar Abortus 2308] gi|189020107|gb|ACD72829.1| Alpha-isopropylmalate/homocitrate synthase [Brucella abortus S19] gi|297175858|gb|EFH35205.1| alpha-isopropylmalate/homocitrate synthase:AsmA [Brucella abortus bv. 5 str. B3196] Length = 1247 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQFVSAMPIAD 338 >gi|254694093|ref|ZP_05155921.1| Alpha-isopropylmalate/homocitrate synthase [Brucella abortus bv. 3 str. Tulya] Length = 1247 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSTPLDPIKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQFVSAMPIAD 338 >gi|260565362|ref|ZP_05835846.1| alpha-isopropylmalate/homocitrate synthase [Brucella melitensis bv. 1 str. 16M] gi|265991466|ref|ZP_06104023.1| AsmA family protein [Brucella melitensis bv. 1 str. Rev.1] gi|260151430|gb|EEW86524.1| alpha-isopropylmalate/homocitrate synthase [Brucella melitensis bv. 1 str. 16M] gi|263002250|gb|EEZ14825.1| AsmA family protein [Brucella melitensis bv. 1 str. Rev.1] Length = 1254 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 86/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G I +LPF Sbjct: 8 LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDISARLLPF 67 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 68 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 175 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 345 >gi|148559250|ref|YP_001259303.1| hypothetical protein BOV_1365 [Brucella ovis ATCC 25840] gi|148370507|gb|ABQ60486.1| conserved hypothetical protein [Brucella ovis ATCC 25840] Length = 1247 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 1 MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 61 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLGKDGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAINLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338 >gi|17986883|ref|NP_539517.1| hypothetical protein BMEI0600 [Brucella melitensis bv. 1 str. 16M] gi|17982523|gb|AAL51781.1| hypothetical membrane spanning protein [Brucella melitensis bv. 1 str. 16M] Length = 1226 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 79/329 (24%), Positives = 150/329 (45%), Gaps = 18/329 (5%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82 +P F+DW+ +R DFER+A+ I+G+ + V G I +LPFPSV F D+R+ + Sbjct: 1 MPPFVDWSGYRADFEREASRILGRPVTVAGDISARLLPFPSVTFSDVRV-GADAAHPVMT 59 Query: 83 IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKI 142 ++ SM AE +P L G++ +FDM +++P + L G +W R ST + +E++ Sbjct: 60 VDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGKVDWAIRPSTPLDPTKIGVERL 119 Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202 + G + + ++ S + S LN LS +S+ G A G+ ++ Sbjct: 120 SINDGVVTLREEASGRSDTASALNAV-----------LSANSLAGPWQANGSFVLRGEKF 168 Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS-KLL 261 A +++ + + ++ ++ P +P I + G++ + + Y+G FS+ Sbjct: 169 AIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMTDGRLDYAGDFSLRSSDMVATA 228 Query: 262 NLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN 316 L+ A+K R+SG FK +S ++++ ++ D + + Sbjct: 229 GLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPADNPYVVDGSALIDYGAKPHFE 288 Query: 317 FSENGAESMHDLNETDFFEEEEKKNKNDD 345 S +G + NET E+ D Sbjct: 289 VSADGQQLFWGPNETAGEEQSVSAMPIAD 317 >gi|261219171|ref|ZP_05933452.1| AsmA family protein [Brucella ceti M13/05/1] gi|261222551|ref|ZP_05936832.1| AsmA family protein [Brucella ceti B1/94] gi|261318021|ref|ZP_05957218.1| AsmA family protein [Brucella pinnipedialis B2/94] gi|261322232|ref|ZP_05961429.1| AsmA family protein [Brucella ceti M644/93/1] gi|265989052|ref|ZP_06101609.1| AsmA family protein [Brucella pinnipedialis M292/94/1] gi|265998516|ref|ZP_06111073.1| AsmA family protein [Brucella ceti M490/95/1] gi|260921135|gb|EEX87788.1| AsmA family protein [Brucella ceti B1/94] gi|260924260|gb|EEX90828.1| AsmA family protein [Brucella ceti M13/05/1] gi|261294922|gb|EEX98418.1| AsmA family protein [Brucella ceti M644/93/1] gi|261297244|gb|EEY00741.1| AsmA family protein [Brucella pinnipedialis B2/94] gi|262553140|gb|EEZ08974.1| AsmA family protein [Brucella ceti M490/95/1] gi|264661249|gb|EEZ31510.1| AsmA family protein [Brucella pinnipedialis M292/94/1] Length = 1254 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 8 LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 68 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 175 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 345 >gi|225627860|ref|ZP_03785897.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|261758587|ref|ZP_06002296.1| alpha-isopropylmalate/homocitrate synthase [Brucella sp. F5/99] gi|225617865|gb|EEH14910.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|261738571|gb|EEY26567.1| alpha-isopropylmalate/homocitrate synthase [Brucella sp. F5/99] Length = 1254 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 8 LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 68 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 175 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 345 >gi|261325473|ref|ZP_05964670.1| AsmA family protein [Brucella neotomae 5K33] gi|261301453|gb|EEY04950.1| AsmA family protein [Brucella neotomae 5K33] Length = 1254 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 8 LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 68 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 175 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 345 >gi|261315582|ref|ZP_05954779.1| AsmA family protein [Brucella pinnipedialis M163/99/10] gi|261304608|gb|EEY08105.1| AsmA family protein [Brucella pinnipedialis M163/99/10] Length = 1254 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 8 LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 68 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 175 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 345 >gi|261755360|ref|ZP_05999069.1| AsmA family protein [Brucella suis bv. 3 str. 686] gi|261745113|gb|EEY33039.1| AsmA family protein [Brucella suis bv. 3 str. 686] Length = 1254 Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 8 LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 68 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRNDTASALNAV-----------LS 175 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + + +G + NET E+ D Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVNADGQQLFWGPNETAGEEQSVSAMPIAD 345 >gi|260566086|ref|ZP_05836556.1| alpha-isopropylmalate/homocitrate synthase [Brucella suis bv. 4 str. 40] gi|260155604|gb|EEW90684.1| alpha-isopropylmalate/homocitrate synthase [Brucella suis bv. 4 str. 40] Length = 1254 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 8 LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 68 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRNDTASALNAV-----------LS 175 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + + +G + NET E+ D Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVNADGQQLFWGPNETAGEEQSVSAMPIAD 345 >gi|265999398|ref|ZP_05466160.2| alpha-isopropylmalate/homocitrate synthase [Brucella melitensis bv. 2 str. 63/9] gi|263093679|gb|EEZ17684.1| alpha-isopropylmalate/homocitrate synthase [Brucella melitensis bv. 2 str. 63/9] Length = 1254 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 162/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 8 LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 68 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 175 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK + +S ++++ Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADREHFDVSEFRMEQGPA 295 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 345 >gi|265995304|ref|ZP_06107861.1| AsmA family protein [Brucella melitensis bv. 3 str. Ether] gi|262766417|gb|EEZ12206.1| AsmA family protein [Brucella melitensis bv. 3 str. Ether] Length = 1254 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 160/350 (45%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 8 LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM E +P L G++ +FDM +++P + L G Sbjct: 68 PSVTFSDVRV-GADAAHPVMTVDRFSMDTELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 175 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEEKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 345 >gi|237815808|ref|ZP_04594805.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|260546844|ref|ZP_05822583.1| alpha-isopropylmalate/homocitrate synthase [Brucella abortus NCTC 8038] gi|260755131|ref|ZP_05867479.1| AsmA family protein [Brucella abortus bv. 6 str. 870] gi|260758350|ref|ZP_05870698.1| AsmA family protein [Brucella abortus bv. 4 str. 292] gi|260762176|ref|ZP_05874519.1| AsmA family protein [Brucella abortus bv. 2 str. 86/8/59] gi|260884143|ref|ZP_05895757.1| AsmA family protein [Brucella abortus bv. 9 str. C68] gi|237789106|gb|EEP63317.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|260095894|gb|EEW79771.1| alpha-isopropylmalate/homocitrate synthase [Brucella abortus NCTC 8038] gi|260668668|gb|EEX55608.1| AsmA family protein [Brucella abortus bv. 4 str. 292] gi|260672608|gb|EEX59429.1| AsmA family protein [Brucella abortus bv. 2 str. 86/8/59] gi|260675239|gb|EEX62060.1| AsmA family protein [Brucella abortus bv. 6 str. 870] gi|260873671|gb|EEX80740.1| AsmA family protein [Brucella abortus bv. 9 str. C68] Length = 1254 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 8 LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 68 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 175 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQFVSAMPIAD 345 >gi|307319667|ref|ZP_07599092.1| conserved hypothetical protein [Sinorhizobium meliloti AK83] gi|306894598|gb|EFN25359.1| conserved hypothetical protein [Sinorhizobium meliloti AK83] Length = 1234 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 87/334 (26%), Positives = 160/334 (47%), Gaps = 13/334 (3%) Query: 14 SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73 V L A PLFIDWT FR DFER+A+ I+GK + V G + ++PFP+V D+R+ Sbjct: 2 VVALFAALIAPLFIDWTSFRNDFEREASRIMGKPVVVHGSVDARLIPFPTVTLNDVRVGA 61 Query: 74 KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM 133 + G+ ++ SM AE P LSGE +FDM +D+P L G +W + Sbjct: 62 SDGGAPLIQVAQFSMSAELAPFLSGEALIFDMRLDRPKARLRLQPDGTLDWARGSRAAIP 121 Query: 134 IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193 H VILEK+ + G I+ +D+++ + +SDL+ + LS ++ G EG Sbjct: 122 AHTVILEKVEIADGEIEFVDEQTGRTRRVSDLS-----------ADLSARTLAGPWRVEG 170 Query: 194 TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253 D + +F +++N + A+SL+ +L P P ++L G+L + +P+Y+G F++ Sbjct: 171 RATLDGEAGSFSLSSNTVDETGALSLRARLVPDERPFGVELDGDLKIVDFRPVYAGRFTL 230 Query: 254 AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313 + + R++G F++++ ++R+ Y + P+ + + ++ Sbjct: 231 TENRPASE--VKADGALRINGEFQLTNESIRVPEYHFEIGPPDDPYIVTGEATLDTGKDQ 288 Query: 314 LLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347 +G + + ++ L+ Sbjct: 289 RFLLIADGQQIDVSRIGNSGSSGKTGRDPAISLR 322 >gi|261214392|ref|ZP_05928673.1| AsmA family protein [Brucella abortus bv. 3 str. Tulya] gi|260915999|gb|EEX82860.1| AsmA family protein [Brucella abortus bv. 3 str. Tulya] Length = 1254 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 8 LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +++P + L G Sbjct: 68 PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + +E++ + G + + ++ S + S LN LS Sbjct: 127 VDWAIRPSTPLDPIKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 175 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ ++ A +++ + + ++ ++ P +P I + G++ Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235 Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + + Y+G FS+ L+ A+K R+SG FK +S ++++ Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ D + + S +G + NET E+ D Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQFVSAMPIAD 345 >gi|15965890|ref|NP_386243.1| hypothetical protein SMc01454 [Sinorhizobium meliloti 1021] gi|307308200|ref|ZP_07587909.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C] gi|15075159|emb|CAC46716.1| Hypothetical protein SMc01454 [Sinorhizobium meliloti 1021] gi|306901198|gb|EFN31804.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C] Length = 1234 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 86/334 (25%), Positives = 159/334 (47%), Gaps = 13/334 (3%) Query: 14 SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73 V L A PLFIDWT FR DFER+A+ I+GK + V G + ++PFP+V D+R+ Sbjct: 2 VVALFAALIAPLFIDWTSFRNDFEREASRIMGKPVVVHGSVDARLIPFPTVTLNDVRVGA 61 Query: 74 KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM 133 + G+ ++ SM AE P LSGE +FDM +D+P L G +W + Sbjct: 62 SDGGAPLIQVAQFSMSAELAPFLSGEALIFDMRLDRPKARLRLQPDGTLDWARGSRAAIP 121 Query: 134 IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193 H VILEK+ + G I+ +D+++ + +SDL+ + LS ++ G EG Sbjct: 122 AHTVILEKVEIADGEIEFVDEQTGRTRRVSDLS-----------ADLSARTLAGPWRVEG 170 Query: 194 TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253 D + +F +++N + A+SL+ +L P P ++L G+L + + +Y+G F++ Sbjct: 171 RATLDGEAGSFSLSSNTVDETGALSLRARLVPDERPFGVELDGDLKIVDFRAVYAGRFTL 230 Query: 254 AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313 + + R++G F++++ ++R+ Y + P+ + + ++ Sbjct: 231 TENRPASE--VKADGALRINGEFQLTNESIRVPEYHFEIGPPDDPYIVTGEATLDTGKDQ 288 Query: 314 LLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347 +G + + ++ L+ Sbjct: 289 RFLLIADGQQIDVSRIGNSGSSGKTGRDPAISLR 322 >gi|239832285|ref|ZP_04680614.1| Translation initiation factor IF-2 [Ochrobactrum intermedium LMG 3301] gi|239824552|gb|EEQ96120.1| Translation initiation factor IF-2 [Ochrobactrum intermedium LMG 3301] Length = 1284 Score = 207 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 90/352 (25%), Positives = 160/352 (45%), Gaps = 20/352 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L R+ + +G L ++L A VP F+DW+ +R DFER+A+ I+G+ + V G + +LPF Sbjct: 7 LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVKVAGDVSARLLPF 66 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PSV F D+R+ + ++ SM AE +P L G++ +FDM +D+P L G Sbjct: 67 PSVAFSDVRV-GADAAQPVMTVDTFSMDAELMPFLRGQLLIFDMRVDRPRATISLDRDGK 125 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W R ST + LE++ VK G I + ++ S + + ++LN ISA Sbjct: 126 VDWAIRPSTPLDPAKIKLERLSVKDGTITLREEASGRSHTATELNAVISA---------- 175 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S+ G A G+ +R A +T+ + ++ ++ ++ P A P + G++ Sbjct: 176 -NSLAGPWQANGSLVLRGERLAIDLTSGEAKPDGSLRVRARISPDAIPATFETDGDVTVT 234 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKK--------SRLSGNFKISDGNVRISRYKLQSI 293 E + Y+G FS+ + R++G FK S ++++ Sbjct: 235 EGRLDYAGDFSLRSSDMVAKTGKDQKAPAETPFFSGVRVTGKFKADRSRFDASEFRMEQG 294 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ + K + EE S +G + NE E+ D Sbjct: 295 PADNPYVVNGKAFIDYGEEPRFEVSADGQQLYWGPNEAASEEQTGSDMPIAD 346 >gi|222086401|ref|YP_002544935.1| hypothetical protein Arad_2939 [Agrobacterium radiobacter K84] gi|221723849|gb|ACM27005.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 1234 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 93/323 (28%), Positives = 163/323 (50%), Gaps = 12/323 (3%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI 83 PLFIDWTDFR++FE QA+ I+GKK+ V G + +LPFPSV D+R+ Q+ DG+ +I Sbjct: 24 PLFIDWTDFRKNFEDQASRIIGKKVTVHGTVDARLLPFPSVTLHDVRVGQEADGTPLVQI 83 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIH 143 SM AE P LSGE +FDM + +P + L G +W + +V+LE +H Sbjct: 84 AQFSMDAELAPFLSGEALIFDMRVSEPKVRLRLLKDGTLDWMRGSQPEMPAKSVVLESVH 143 Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203 V GG I+ ID++S + ++ N ++SA+ S+ G EG D + + Sbjct: 144 VDGGDIQFIDEQSGRTRHITGFNAEMSAK-----------SLAGPWRIEGDAALDGEHGS 192 Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL 263 F I+++ P + + ++ +L P +P+I+DL G L +++P Y G+F+ + + Sbjct: 193 FTISSSQPDDSGVLRVRTRLNPDRHPLIVDLDGELKLVDRKPDYLGLFTAGIEDKQARKA 252 Query: 264 ELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 + R+ G F++++ +RI Y+L+ + + + + + +G + Sbjct: 253 ADEQAQPRVKGRFELTNERIRIPEYRLEVGAADDPYVVTGEATLDTGTKPEFLLTADGQQ 312 Query: 324 SMHD-LNETDFFEEEEKKNKNDD 345 + L T + +N Sbjct: 313 IDVNRLGNTQGSNGKTNRNPAIS 335 >gi|222149089|ref|YP_002550046.1| hypothetical protein Avi_2828 [Agrobacterium vitis S4] gi|221736074|gb|ACM37037.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 1230 Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 99/347 (28%), Positives = 164/347 (47%), Gaps = 17/347 (4%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 ML R+ I G L V L A PLF++WTDFR+DFE QA+ ++GKK+ V G ++ ILP Sbjct: 1 MLGRLFIAFGGLVVVALFAALLAPLFVNWTDFRKDFEDQASRLLGKKVVVHGAVEARILP 60 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 FPS+ D+ + DG + + SM AE P LSGE R+F M I+QP++ L G Sbjct: 61 FPSITMNDVTVGPGTDGKTLAHVARFSMDAELAPFLSGEARIFAMRIEQPNVRLRLLPDG 120 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 +W Q NV+LEK+ V G + ++DQ++ + ++ LN ++AR Sbjct: 121 SLDWLQGSQPSLPGRNVVLEKVTVVDGAVTLVDQQTGRTRQINGLNADMTAR-------- 172 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPA-KNKAISLKIQLFPLAYPIIIDLFGNLF 239 S+ G G G D + F +++ P A+ +KI + P A P+ IDL G+L Sbjct: 173 ---SLAGPWTVLGQGALDGQSGNFSLSSLQPDPAKGAVPVKIHIAPDATPVDIDLSGDLA 229 Query: 240 WNEKQPIYSGVF-SVAGDFSKLLNLELSAK----KSRLSGNFKISDGNVRISRYKLQSIL 294 +K+P G F + ++ + R+ G F++++ VRI Y+++ Sbjct: 230 LVDKRPTLQGSFLAALRANAEDGQVSAPMGNPVLPPRIKGKFELANDRVRIPEYRMEIGA 289 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341 + + + + + G + D + + + Sbjct: 290 SDQPYIITGEATLDSGKAPEFLLTAEGQQIDVDKLTPSLPKGKTGRQ 336 >gi|163758985|ref|ZP_02166071.1| hypothetical protein HPDFL43_04455 [Hoeflea phototrophica DFL-43] gi|162283389|gb|EDQ33674.1| hypothetical protein HPDFL43_04455 [Hoeflea phototrophica DFL-43] Length = 1281 Score = 197 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 76/349 (21%), Positives = 151/349 (43%), Gaps = 19/349 (5%) Query: 14 SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73 + L A P FIDWT +R FE +A+ IVG+++ V+G +LPFPSV F D+ + Sbjct: 2 VLALFSALIAPYFIDWTSYRTAFEAEASRIVGQQVKVRGEADARLLPFPSVTFSDVVVG- 60 Query: 74 KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM 133 +DG I SM AE P LSGE+R+ DM ++ P + + G +W ++ Sbjct: 61 -DDGEPAMTISRFSMDAELAPFLSGEVRIIDMRVENPDVAVRILEDGSLDWALKRKPTTP 119 Query: 134 IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193 V+LE + V I I+D+++ + + + D+N ++ A S+ G + E Sbjct: 120 GDTVVLENVTVNNANITIVDEQNGRTHQIRDINARVKA-----------GSLSGPWVIEA 168 Query: 194 TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253 G +R I+ + +I +++++ P +P+ ++ G + +P+Y G+F+ Sbjct: 169 EGAIAGQRGGVSISTGLARDDGSIRMRMRVAPDQWPVFLETEGEARIADSKPLYDGLFNF 228 Query: 254 AGDFSKLLNLELSAKKSRL--SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE 311 + F S + + G+F ++ + I ++ + L + + + Sbjct: 229 S-AFPDDNGAGTSPVRPLIVAKGDFAATNERLSIEEWRAEIGLSDDPYIVTGQATIDTGP 287 Query: 312 ENLLNFSENGAESMHDL---NETDFFEEEEKKNKNDDLKKDDIQYSVNK 357 +G + D ++ + + +++V Sbjct: 288 NPDFLLIADGQQINMDRLGADQAQGDTQSAAADATVAPVSLAERFAVFN 336 >gi|118590868|ref|ZP_01548268.1| hypothetical protein SIAM614_19446 [Stappia aggregata IAM 12614] gi|118436390|gb|EAV43031.1| hypothetical protein SIAM614_19446 [Stappia aggregata IAM 12614] Length = 1276 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 74/323 (22%), Positives = 125/323 (38%), Gaps = 22/323 (6%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDI 69 G +VLV A P FIDWT +R FE A +G K+ V G + +LP PS+ F D+ Sbjct: 2 GVTVILVLVAALVGPFFIDWTVYRSTFESYAERALGHKVTVLGEADLRLLPAPSISFSDV 61 Query: 70 RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKS 129 R+ ED + MR E LL GEIRV DM +D+PHL L G +W + Sbjct: 62 RVGGAED--PLLVVSRFDMRIELPSLLKGEIRVLDMELDRPHLALSLDEAGRLDWLTAMT 119 Query: 130 TMD-----MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 + ++ E + ++ G + I+D S + + + NL +SAR S Sbjct: 120 SNGAIAKLAPDDLTFENVTIRDGALTIVDARSGDINRIDNGNLVVSAR-----------S 168 Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 + G A G+ + + ++ + +K + P P+ G L + Sbjct: 169 LAGPFRAAGSLTLNGAPYTVSLATGRAQEDAGLRVKGDVTPTNRPVSFAFDGQLQVADAA 228 Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 P + G F++A + + + G F V + ++ + + Sbjct: 229 PEFDGRFTIASVALEENDPN----MWQAEGQFTADIAEVAVPEFEFRYGPEDRRLSMTGN 284 Query: 305 TKVSQDEENLLNFSENGAESMHD 327 + + + D Sbjct: 285 ADLVYAGDKRFEIRARSKQVDLD 307 >gi|289664280|ref|ZP_06485861.1| hypothetical protein XcampvN_14743 [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 661 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 55/388 (14%), Positives = 126/388 (32%), Gaps = 32/388 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR +G VLV F + DW R ER + G++ + G + + + Sbjct: 27 RRRRWWIGIGIVAVLVAIFML--LFDWNWLRGPVERAVSAKTGREFHL-GHLDVDLGRTI 83 Query: 63 SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 +V + + + +++ + E PLL G++++ ++ ++ P L + Sbjct: 84 TVRGERLSLGNASWSKRGAMAELNAAEIDVELWPLLRGKLQLPEIRLEHPTLLLEAGNDS 143 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + + L ++ V GR++ ID S + +N ++P Sbjct: 144 HPGNWVFDQSDSDGSMPRLGRLLVNNGRLQYIDDASRSDVDV----------VINSLAPP 193 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNL 238 S D + +G G + + K P + +I L A + G L Sbjct: 194 SSDQRAAPIGIDGKGRWKGYPFSLKGNTASPLELSQSEHPFRIDLRGSAGATRTHVRGTL 253 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSI 293 + ++ +++G + L + +L G + R ++ + Sbjct: 254 TNPFQFRVFDLQMALSGQDMEELYPLIGVAMPSTPPYKLDGRLRRDGDVWRYEKFTGTAG 313 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKK 348 + ++ + + A D ++ F + ++ N + KK Sbjct: 314 DSD----LSGTAEIDLRNKRPF-LRADLASKRLDFDDLAGFVGAPPKTGANESANAEQKK 368 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGD 376 Q + + + +D Sbjct: 369 QAAQLAASARVLPTTPYDLSKLRAMDAQ 396 >gi|254505123|ref|ZP_05117274.1| AsmA family [Labrenzia alexandrii DFL-11] gi|222441194|gb|EEE47873.1| AsmA family [Labrenzia alexandrii DFL-11] Length = 1276 Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats. Identities = 73/319 (22%), Positives = 129/319 (40%), Gaps = 22/319 (6%) Query: 14 SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73 +VLV A P F+DWT +R FE A+ ++G ++ V G + +LP P + F D+R+ + Sbjct: 2 VLVLVTALVGPFFVDWTIYRSTFETYASRVLGHRVTVLGEADLRLLPAPYIRFSDVRVGE 61 Query: 74 KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-----FQRK 128 ED + MR E PLL GE RV DM +++PHL L G +W Sbjct: 62 AED--PLLVVSRFDMRVELPPLLKGEFRVVDMALERPHLTLSLDEAGRLDWLTAVTADGA 119 Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188 +V LEK+ ++ G I +ID + + + L + NL +SAR ++ G Sbjct: 120 LADLPPEDVALEKVTIRDGAISVIDARTGETHSLDNGNLSVSAR-----------TLAGP 168 Query: 189 VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248 A+G+ + + + + N+++ LK + P P+ G L + P + Sbjct: 169 FRADGSLTLNGSAYSVSLASGRIRDNESLRLKGDVTPTDLPVTFSFDGALSETDAAPRFD 228 Query: 249 GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308 G F + + + G F V + ++ + + + + Sbjct: 229 GAFDITSVALDESDTN----TWSVDGQFSADIAEVAVPEFEFRFGPDDKRLSMTGEADLV 284 Query: 309 QDEENLLNFSENGAESMHD 327 + + D Sbjct: 285 YSGDRRFEVRAQSKQVDLD 303 >gi|294667434|ref|ZP_06732651.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602767|gb|EFF46201.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 648 Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 58/388 (14%), Positives = 130/388 (33%), Gaps = 34/388 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR IGLG + ++V L DW R ER + G++ + G + + + Sbjct: 16 RRWWIGLGIVAALVA----IFVLLFDWNWLRGPVERAVSAKTGREFHL-GHLDVDLGRIT 70 Query: 63 SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 +V + + + +++ + EF PLL G++R+ ++ ++ P L + Sbjct: 71 TVRGERLSLGNASWSKRGAMAELNAAEIDVEFWPLLRGKLRLPEIRLEHPTLLLEAGNDS 130 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + + L ++ V GR++ ID S + +N ++P Sbjct: 131 HPGNWVFDQSDGDGSMPRLGRLLVTNGRLQYIDDASRSDVDV----------AINSLAPP 180 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNL 238 S D + +G G + + K P + +I L A + G L Sbjct: 181 SSDQRAAPIGIDGKGRWKGYPFSLKGNTASPLELSQSEHPFRIDLRGSAGATRTHVRGTL 240 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSI 293 + ++ +++G + L + +L G + R ++ + Sbjct: 241 TNPFQFRVFDLQMALSGQDMEDLYPLIGVAMPSTPPYKLDGRLRRDGDVWRYEKFTGTAG 300 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKK 348 + ++ + + A D ++ F + ++ N + KK Sbjct: 301 DSD----LSGTAEIDLRNKRPF-LRADLASKRLDFDDLAGFVGAPPKTGTNESANAEQKK 355 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGD 376 Q + + + +D + Sbjct: 356 QAAQLAASARVLPTTPYDLSKLRSMDAQ 383 >gi|294627295|ref|ZP_06705881.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598377|gb|EFF42528.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 648 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 58/388 (14%), Positives = 130/388 (33%), Gaps = 34/388 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR IGLG + ++V L DW R ER + G++ + G + + + Sbjct: 16 RRWWIGLGIVAALV----TIFVLLFDWNWLRGPVERAVSAKTGREFHL-GHLDVDLGRIT 70 Query: 63 SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 +V + + + +++ + EF PLL G++R+ ++ ++ P L + Sbjct: 71 TVRGERLSLGNASWSKRGAMAELNAAEIDVEFWPLLRGKLRLPEIRLEHPTLLLEAGNDS 130 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + + L ++ V GR++ ID S + +N ++P Sbjct: 131 HPGNWVFDQSGGDGSMPRLGRLLVTNGRLQYIDDASRSDVDV----------AINSLAPP 180 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNL 238 S D + +G G + + K P + +I L A + G L Sbjct: 181 SSDQRAAPIGIDGKGRWKGYPFSLKGNTASPLELSQSEHPFRIDLRGSAGATRTHVRGTL 240 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSI 293 + ++ +++G + L + +L G + R ++ + Sbjct: 241 TNPFQFRVFDLQMALSGQDMEDLYPLIGVAMPSTPPYKLDGRLRRDGDVWRYEKFTGTAG 300 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKK 348 + ++ + + A D ++ F + ++ N + KK Sbjct: 301 DSD----LSGTAEIDLRNKRPF-LRADLASKRLDFDDLAGFVGAPPKTGTNESANAEQKK 355 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGD 376 Q + + + +D + Sbjct: 356 QAAQLAASARVLPTTPYDLSKLRSMDAQ 383 >gi|21243771|ref|NP_643353.1| hypothetical protein XAC3044 [Xanthomonas axonopodis pv. citri str. 306] gi|21109360|gb|AAM37889.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 648 Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 57/388 (14%), Positives = 129/388 (33%), Gaps = 34/388 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR IGLG + ++V L DW R ER + G++ + G + + + Sbjct: 16 RRWWIGLGIVAALVA----IFVLLFDWNWLRGPVERAVSAKTGREFHL-GHLDVDLGRIT 70 Query: 63 SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 +V + + + +++ + EF PLL G++R+ ++ ++ P L + Sbjct: 71 TVRGERLSLGNASWSKRGAMAELNAAEIDVEFWPLLRGKLRLPEIRLEHPTLLLEAGNDS 130 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + + L ++ V GR++ ID + + +N ++P Sbjct: 131 HPGNWVFDQSDGDGSMPRLGRLLVTNGRLQYIDDATRSDVDV----------AINSLAPP 180 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNL 238 S D + +G G + + K P + +I L A + G L Sbjct: 181 SSDQRAAPIGIDGEGRWKGYPFSLKGNTASPLELSQSEHPFRIDLRGSAGATRTHVRGTL 240 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSI 293 + ++ +++G + L + +L G + R ++ + Sbjct: 241 TNPFQFRVFDLQMALSGQDMEDLYPLIGVAMPSTPPYKLDGRLRRDGDVWRYEKFTGTAG 300 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKK 348 + ++ + + A D ++ F + ++ N + KK Sbjct: 301 DSD----LSGTAEIDLRNKRPF-LRADLASKRLDFDDLAGFVGAPPKTGNNESANAEQKK 355 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGD 376 Q + + + +D Sbjct: 356 QAAQLATSARVLPTTPYDLSKLRAMDAQ 383 >gi|289667404|ref|ZP_06488479.1| hypothetical protein XcampmN_02512 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 651 Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 55/388 (14%), Positives = 127/388 (32%), Gaps = 32/388 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR +G VLV F + DW R ER + G++ + G + + + Sbjct: 17 RRRRWWIGIGIVAVLVAIFML--LFDWNWLRGPVERAVSAKTGREFHL-GHLDVDLGRTI 73 Query: 63 SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 +V + + + +++ + E PLL G++++ ++ ++ P L + Sbjct: 74 TVRGERLSLGNASWSKRGAMAELNAAEIDVELWPLLRGKLQLPEIRLEHPTLLLEAGNDS 133 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + + L ++ V GR++ ID S + +N ++P Sbjct: 134 HPGNWVFDQSDSDGSMPPLGRLLVNNGRLQYIDDASRSDVDV----------VINSLAPP 183 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNL 238 S D + +G G + + K P + +I L A + G L Sbjct: 184 SSDQRAAPIGIDGKGRWKGYPFSLKGNTASPLELSQSEHPFRIDLRGSAGATRTHVRGTL 243 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSI 293 + ++ +++G + L + +L G + R ++ + Sbjct: 244 TNPFQFRVFDLQMALSGQDMEELYPLIGVAMPSTPPYKLDGRLRRDGDVWRYEKFTGTAG 303 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKK 348 + ++ + + + A D ++ F + ++ N + KK Sbjct: 304 DSD----LSGTAEIDLRNKRPI-LRADLASKRLDFDDLAGFVGAPPKTGANESANAEQKK 358 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGD 376 Q + + + +D Sbjct: 359 QAAQLAASARVLPTTPYDLSKLRAMDAQ 386 >gi|78048737|ref|YP_364912.1| AsmA family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037167|emb|CAJ24912.1| AsmA family membrane protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 648 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 56/388 (14%), Positives = 127/388 (32%), Gaps = 34/388 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR IGLG + ++ L DW R ER + G++ + G + + + Sbjct: 16 RRWWIGLGIVAVLI----TIFVLLFDWNWLRGPVERAVSAKTGREFHL-GHLDVDLGRIT 70 Query: 63 SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 +V + + + +++ + EF PLL G +R+ ++ ++ P L + Sbjct: 71 TVRGERLSLGNAPWSKRGAMAEMNAAEIDVEFWPLLRGSLRLPEIRLEHPTLLLEAGNDS 130 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + + L ++ V GR++ ID S + +N ++P Sbjct: 131 HPGNWVFDQSDGDGSMPRLGRLLVNNGRLQYIDDASRSDVDV----------AINSLAPP 180 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI--SLKIQLFPLAYPIIIDLFGNL 238 S D + +G G + + K P + +I L A + G L Sbjct: 181 SSDQRAAPIGIDGKGRWKGYPFSLKGNTASPLELSQTEHPFRIDLRGSAGATRTHVRGTL 240 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSI 293 + ++ +++G + L + +L G + R ++ + Sbjct: 241 TNTFQFRVFDLQMALSGQDMEDLYPLIGVAMPSTPPYKLDGRLRRDGDVWRYEKFTGTAG 300 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKK 348 + ++ + + A D ++ F + ++ N + K+ Sbjct: 301 DSD----LSGTAEIDLRNKRPF-LRADLASKRLDFDDLAGFVGAPPKTGTNESANAEQKR 355 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGD 376 Q + + + +D Sbjct: 356 QAAQLAASHRVLPATPYDLSKLRAMDAQ 383 >gi|92118246|ref|YP_577975.1| hypothetical protein Nham_2736 [Nitrobacter hamburgensis X14] gi|91801140|gb|ABE63515.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 1275 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 70/329 (21%), Positives = 133/329 (40%), Gaps = 17/329 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ L+GL F V L+ A P FIDW FR FE +A ++G + V GG+ +LP Sbjct: 1 MQTTLLGLAITFIVALIAALIGPYFIDWNRFRPQFEAEAARVIGAPVRVDGGLDARLLPS 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PS+ + + + D + + L++ L+ GE R ++ I+ L+ L S G Sbjct: 61 PSLQLRSVVVGGPNDSGK-VRADNLAVEFSLGSLMRGEWRATELTINGVALDLGLDSGGR 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W + + ++++++ GR+ + D S L+D+ Sbjct: 120 IDWPLSS-RSLDVASFSIDRLNLT-GRVALHDAASRSTLELNDV-----------AFSGD 166 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + S SV +G R F+I++ A + + + P IDL G L ++ Sbjct: 167 VRSSGASVRGDGNFELSGTRYPFRISSGQAGDGDASRVHVAIDPGTRAAFIDLDGILSFD 226 Query: 242 EKQPIYSGVFSVAG---DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 E+ P + G ++AG K + + S + R+S K R+ + + +++ Sbjct: 227 ERAPHFDGALTLAGAAEADGKNFSSDPSQRPWRVSAKVKADPKGARLEQVEASYGAGDAA 286 Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHD 327 V ++ + D Sbjct: 287 LRLAGVGDVRFGASPRIHAELFARQLDAD 315 >gi|188990689|ref|YP_001902699.1| AsmA family membrane protein [Xanthomonas campestris pv. campestris str. B100] gi|167732449|emb|CAP50643.1| AsmA family membrane protein [Xanthomonas campestris pv. campestris] Length = 651 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 52/386 (13%), Positives = 128/386 (33%), Gaps = 34/386 (8%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64 LIG G + +++++ DW R ER + G++ + G + + + +V Sbjct: 21 WLIGTGIVLALIVILVLV----FDWNWLRGPVERAVSAKTGREFHL-GHLDVDLGRIVTV 75 Query: 65 FFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + + + +++ + EF PLL G++R+ ++ ++ + Sbjct: 76 RGEQLSLGNAAWSKRGPMAQMRSAEIDVEFWPLLRGKVRLPEIRLEHTKVVLEAGDDTHP 135 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + +++ L ++ V+ GR++ ID + + +N ++P Sbjct: 136 GNWVFETSGGDGTLPRLGRLLVQDGRLQYIDAANKSDVDV----------AINSLAPPRS 185 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI--SLKIQLFPLAYPIIIDLFGNLFW 240 D + +G G + K P + +I L A + G L Sbjct: 186 DQRAAPIGIDGKGRWKGYPFTLKGNTASPLELSQTEHPFRIDLRGSAGATRTHVRGTLTN 245 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYKLQSILP 295 + ++ +++G + L L G+ + + R + ++ Sbjct: 246 PFQFQVFDLQMALSGQDMEDLYPLTGVAIPSTPPYTLDGHLRRNGDIWRYEDFTGKAGDS 305 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKKDD 350 + +V + + A D ++ F + ++ N + KK Sbjct: 306 D----LSGTAEVDLRNKRPF-LRADLASKRLDFDDLAGFVGAPPKTGANESANAEQKKRA 360 Query: 351 IQYSVNKKEEKDNSHDKENQENFSGD 376 Q + + + D +D Sbjct: 361 AQLAADTRVLPDTPYDLSKLRAMDAQ 386 >gi|325914101|ref|ZP_08176454.1| hypothetical protein involved in outer membrane biogenesis [Xanthomonas vesicatoria ATCC 35937] gi|325539604|gb|EGD11247.1| hypothetical protein involved in outer membrane biogenesis [Xanthomonas vesicatoria ATCC 35937] Length = 665 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 63/388 (16%), Positives = 132/388 (34%), Gaps = 34/388 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR LIGLG + ++++V L DW R ER + G+ + G + + + Sbjct: 33 RRWLIGLGSVAAILVV----FVLLFDWNWLRGPVERIVSAKTGRDFHL-GHLHVDLGRTT 87 Query: 63 SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 +V + +++ +++ + E PLL G++R+ ++ ++QP + + Sbjct: 88 TVRGERLQLGNATWSKRGAMAEMNAAEIDVELWPLLRGKVRLPEIRLEQPSVLLEAGNDT 147 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + L ++ V GR++ ID S SD+++ I N ++P Sbjct: 148 HPGNWVFDDRNSDGSMPRLGRLLVTKGRLQYIDDASR-----SDIDVAI-----NSLAPP 197 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNL 238 D + +G G + K P + +I L A + G L Sbjct: 198 RSDQRAAPIGIDGKGRWKGYPFTLKGDTASPLELSQSEHPFRIDLRGSAGATRTHVRGTL 257 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYKLQSI 293 + ++ +++G + L L G + R R+ + Sbjct: 258 TNPFQFRVFDLQMALSGQDMEDLYPLTGVAMPSTPPYTLDGRLRRDGDVWRYERFTGTAG 317 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKK 348 + +V + L + A D ++ F + ++ N + KK Sbjct: 318 DSD----LSGTAEVDLRNKRPL-LRADLASKRLDFDDLAGFVGAPPKTGTDESANAEQKK 372 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGD 376 Q + + + +D Sbjct: 373 QAAQLAASARILPTTPYDLSKLRAMDAQ 400 >gi|21232292|ref|NP_638209.1| hypothetical protein XCC2861 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767574|ref|YP_242336.1| hypothetical protein XC_1247 [Xanthomonas campestris pv. campestris str. 8004] gi|21114058|gb|AAM42133.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572906|gb|AAY48316.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 651 Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 52/386 (13%), Positives = 128/386 (33%), Gaps = 34/386 (8%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64 LIG G + +++++ DW R ER + G++ + G + + + +V Sbjct: 21 WLIGTGIVLALIVILVLV----FDWNWLRGPVERAVSAKTGREFHL-GHLDVDLGRIVTV 75 Query: 65 FFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + + + +++ + EF PLL G++R+ ++ ++ + Sbjct: 76 RGEQLSLGNAAWSKRGPMAQMRSAEIDVEFWPLLRGKVRLPEIRLEHTKVVLEAGDDTHP 135 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + +++ L ++ V+ GR++ ID + + +N ++P Sbjct: 136 GNWVFETSGGDGTLPRLGRLLVQDGRLQYIDAANKSDVDV----------AINSLAPPRS 185 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI--SLKIQLFPLAYPIIIDLFGNLFW 240 D + +G G + K P + +I L A + G L Sbjct: 186 DQRAAPIGIDGKGRWKAYPFTLKGNTASPLELSQTEHPFRIDLRGSAGATRTHVRGTLTN 245 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYKLQSILP 295 + ++ +++G + L L G+ + + R + ++ Sbjct: 246 PFQFQVFDLQMALSGQDMEDLYPLTGVAIPSTPPYTLDGHLRRNGDIWRYEDFTGKAGDS 305 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKKDD 350 + +V + + A D ++ F + ++ N + KK Sbjct: 306 D----LSGTAEVDLRNKRPF-LRADLASKRLDFDDLAGFVGAPPKTGANESANAEQKKRA 360 Query: 351 IQYSVNKKEEKDNSHDKENQENFSGD 376 Q + + + D +D Sbjct: 361 AQLAADTRVLPDTPYDLSKLRAMDAQ 386 >gi|328542986|ref|YP_004303095.1| AsmA family [polymorphum gilvum SL003B-26A1] gi|326412732|gb|ADZ69795.1| AsmA family [Polymorphum gilvum SL003B-26A1] Length = 1324 Score = 179 bits (453), Expect = 7e-43, Method: Composition-based stats. Identities = 80/321 (24%), Positives = 129/321 (40%), Gaps = 22/321 (6%) Query: 12 LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71 + LV A PLF+DWT +R FER A +G ++ V G I +LP P+V F D+R+ Sbjct: 2 AVILALVAALVGPLFVDWTAYRSTFERYAQEALGHRVTVLGKADISLLPAPTVTFTDVRV 61 Query: 72 DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM 131 + ED + MR E PLL GEI+V +M +++PHL L G +W +S Sbjct: 62 GEAED--PLLVVSRFEMRVELPPLLKGEIQVTEMRLERPHLRLSLDEAGRLDWLTSRSAS 119 Query: 132 D-----MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186 D V+ E I + G + ++D V+ L NL ISAR S+ Sbjct: 120 DVLSGRDPKTVMFEHIEIDDGIVALVDARDGSVHRLEKANLLISAR-----------SLN 168 Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 G +GT + K + ++ + I +K + P P+ + + GNL P Sbjct: 169 GPYKIDGTVSHLQKPYSLRVATGERLADGKIRVKADVVPSTTPMELTIDGNLSQEAGAPA 228 Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++G FSVA R G ++ + ++ + + + Sbjct: 229 FTGRFSVASVT----AATEPDIAWRAEGEVELGISRLSFPAFEFRYGPEDRLVTLSGQGH 284 Query: 307 VSQDEENLLNFSENGAESMHD 327 + + D Sbjct: 285 ADLIGARRFEIRASAKQIDLD 305 >gi|27381647|ref|NP_773176.1| hypothetical protein bll6536 [Bradyrhizobium japonicum USDA 110] gi|27354815|dbj|BAC51801.1| bll6536 [Bradyrhizobium japonicum USDA 110] Length = 1206 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 68/327 (20%), Positives = 131/327 (40%), Gaps = 14/327 (4%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ L+GL F + L+ A P FIDW FR FE +A I+G + V G + +LP Sbjct: 1 MQTTLLGLAIAFIIALLAALIGPYFIDWNQFRPQFEAEAGRIIGVPVRVAGELDARLLPA 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P++ + + D + + L + L+ GE R ++ ++ ++ L ++G Sbjct: 61 PTLRLRSVTFGGNND-LGRLRADKLDVEFSLSALMRGEWRATELTVNGMAVDLGLDARGR 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + S + ++ +E++++ GRI + D S LSD+ Sbjct: 120 VDLPSTASGTFNLASLAIERLNLT-GRIALHDAASRSTLELSDI-----------AFSGD 167 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + S+ GSV +G R F+I++ A A L + + P I+ DL G L ++ Sbjct: 168 VRSLAGSVRGDGRFTASGTRYPFRISSGPSADGSATRLHLNIDPGERAILADLEGVLAFD 227 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 + P + G ++A +K E +L+ K + + +++ Sbjct: 228 NRLPKFDGALTLAVPAAKKAG-EAGPTPWKLTAKLKADPAGAKFDQIDASFGAEDNALKV 286 Query: 302 DNKTKVSQDEENLLNFSENGAESMHDL 328 + LL + + D Sbjct: 287 GGVGDLRFGASPLLRAVLSARQIDADK 313 >gi|325925785|ref|ZP_08187158.1| hypothetical protein involved in outer membrane biogenesis [Xanthomonas perforans 91-118] gi|325543842|gb|EGD15252.1| hypothetical protein involved in outer membrane biogenesis [Xanthomonas perforans 91-118] Length = 651 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 56/388 (14%), Positives = 127/388 (32%), Gaps = 34/388 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR IGLG + ++ L DW R ER + G++ + G + + + Sbjct: 19 RRWWIGLGIVAVLI----TIFVLLFDWNWLRGPVERAVSAKTGREFHL-GHLDVDLGRIT 73 Query: 63 SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 +V + + + +++ + EF PLL G +R+ ++ ++ P L + Sbjct: 74 TVRGERLSLGNALWSKRGAMAEMNAAEIDVEFWPLLRGSLRLPEIRLEHPTLLLEAGNDS 133 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + + L ++ V GR++ ID S + +N ++P Sbjct: 134 HPGNWVFDQSDGDGSMPRLGRLLVNNGRLQYIDDASRSDVDV----------AINSLAPP 183 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI--SLKIQLFPLAYPIIIDLFGNL 238 S D + +G G + + K P + +I L A + G L Sbjct: 184 SSDQRAAPIGIDGKGRWKGYPFSLKGNTASPLELSQTEHPFRIDLRGSAGATRTHVRGTL 243 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSI 293 + ++ +++G + L + +L G + R ++ + Sbjct: 244 TNPFQFRVFDLQMALSGQDMEDLYPLIGVAMPSTPPYKLDGRLRRDGDVWRYEKFTGTAG 303 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKK 348 + ++ + + A D ++ F + ++ N + K+ Sbjct: 304 DSD----LSGTAEIDLRNKRPF-LRADLASKRLDFDDLAGFVGAPPKTGTNESANAEQKR 358 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGD 376 Q + + + +D Sbjct: 359 QAAQLAASPRVLPATPYDLSKLRAMDAQ 386 >gi|154245368|ref|YP_001416326.1| AsmA family protein [Xanthobacter autotrophicus Py2] gi|154159453|gb|ABS66669.1| AsmA family protein [Xanthobacter autotrophicus Py2] Length = 1331 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 75/381 (19%), Positives = 135/381 (35%), Gaps = 24/381 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ +LI L + + GAF P +DW +R FE Q + +G + ++G I ILP Sbjct: 1 MQGILISLATAVILAIGGAFAAPFVVDWNAWRGTFETQISQALGVPVVIRGPIDAEILPA 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P + +D+ + ++ L LL G++ + +D+P + + S G Sbjct: 61 PRILLRDVTLGDVVSTGG--TVKALRAELSLGALLRGDMEATGVSLDRPQIRLVIDSAGR 118 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + + + VK G + I+D+ SD+ L LNL+ AR Sbjct: 119 L---ALPTGAQRPAALSIARFEVKDGTLDILDRASDRTQTLDGLNLKGEAR--------- 166 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 S+ G +G R A + T + L++ L P +DL G L + Sbjct: 167 --SLAGPFRLDGEVEAQGARFAIRSTLGKIGDDGTGRLRLVLDGRNRPYALDLDGGLAFA 224 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 +P + G ++ + + +LSG K S V L + Sbjct: 225 GAKPKFEGRAILSRHGGE------GLEAWQLSGTLKASPDAVLADSLDLALGGAQTPAQL 278 Query: 302 DNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359 +++ L+ N D TD K D Sbjct: 279 SGSARLALGRAVGLDAVLNARSLDLDALRAATDGTPNTAKDKATADQNPAAALARFLSGV 338 Query: 360 EKDNSHDKENQENFSGDKMIL 380 S D ++ S ++++L Sbjct: 339 AALPSPDIASRVGLSVEQLML 359 >gi|85714695|ref|ZP_01045682.1| hypothetical protein NB311A_20971 [Nitrobacter sp. Nb-311A] gi|85698580|gb|EAQ36450.1| hypothetical protein NB311A_20971 [Nitrobacter sp. Nb-311A] Length = 1201 Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 70/383 (18%), Positives = 135/383 (35%), Gaps = 24/383 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ L+GL V L+ A P FIDW FR FE +A ++G + V GGI +LP Sbjct: 1 MQTTLLGLAITLIVALIAALIGPHFIDWNHFRSQFETEAARVIGAPVRVAGGIDARMLPS 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PS+ + + + D + + L++ L+ GE R ++ I+ L+ L+ +G Sbjct: 61 PSLRLESVLVGSPND-PGKVHADVLAVEFSLGSLMRGEWRATELTINGVALDLGLNERGQ 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 W ++ ++++++ GR+ D S L+D+ R Sbjct: 120 LEWPL----SFNFGSLSVDQLNLT-GRVAFHDAASRSTLELNDVAFSGGVRPSG------ 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 SV +G R F+I+ A + + + P + + G L ++ Sbjct: 169 -----ASVRGDGNFVLSGTRYPFQISFAQAGVGNASRVHVAIDPGTHAEFTGVDGMLSFD 223 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKK---SRLSGNFKISDGNVRISRYKLQSILPNSS 298 E+ P + G +AG R+S K R+ + + +S+ Sbjct: 224 EQTPRFDGTVKLAGAGEPANKNPSGFPAQRPWRVSAKVKADPKGARLGQIDVSYGKDDSA 283 Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD---LKKDDIQYSV 355 + + L + + + D K + K + + Sbjct: 284 LRLTGEGDIRFGSLPRLRATLSAPQLDADRLRAKDRNPPAKLLQALQRYLTKIPKPRLAA 343 Query: 356 N-KKEEKDNSHDKENQENFSGDK 377 + K ++F D Sbjct: 344 DIKIGVDRIMLGDRPIQDFGADL 366 >gi|325920409|ref|ZP_08182339.1| hypothetical protein involved in outer membrane biogenesis [Xanthomonas gardneri ATCC 19865] gi|325549119|gb|EGD20043.1| hypothetical protein involved in outer membrane biogenesis [Xanthomonas gardneri ATCC 19865] Length = 630 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 49/382 (12%), Positives = 122/382 (31%), Gaps = 32/382 (8%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68 +G + +V F + +W R ER + G++ + G + + + ++ Sbjct: 2 IGLGIVLAIVAIFVL--LFEWNWLRGPVERAVSAKTGREFHL-GYLDVKLGRTTTIRGNR 58 Query: 69 IRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126 + + +++ + E PLL G +R+ ++ +D P + + Sbjct: 59 LSLANAPWSKRGPMAELNSAEIDVEVWPLLRGNVRLPEIRLDHPKVLLEAGDDTHPGNWV 118 Query: 127 RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186 L ++ V GR++ ID + + +N ++P S D Sbjct: 119 FDQDDGDGTMPRLGRLLVDDGRLQYIDAANRSDVDV----------AINSLAPPSSDQRA 168 Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 + +G G + K + P + +I L A + G L + Sbjct: 169 APIGIDGKGRWKGYPFTLKGSTASPLELSQSEHPFRIDLRGSAGATRTHVRGTLTNPFQF 228 Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSST 299 ++ +++G + L +L G+ + + R + + + Sbjct: 229 QVFDLQMALSGQDMQDLYPLTGVAMPSTPPYKLDGHLRRNGKIWRYETFTGTAGDSD--- 285 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKKDDIQYS 354 +V + + A D ++ F + ++ N + KK + + Sbjct: 286 -LAGTAEVDLRNKRPF-LRADLASKRLDFDDLAGFVGAPPKTGANESANAEQKKQAAKLA 343 Query: 355 VNKKEEKDNSHDKENQENFSGD 376 +++ + +D Sbjct: 344 ASERVLPNTPYDLSKLRAMDAQ 365 >gi|90419197|ref|ZP_01227107.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90336134|gb|EAS49875.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 1286 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 73/347 (21%), Positives = 136/347 (39%), Gaps = 36/347 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82 P FIDWT +R DFERQA+ I+G+K+ V+G + +LPFPSV F D+ + +DG Sbjct: 3 APYFIDWTAYRTDFERQASQILGRKVVVEGEAEARLLPFPSVTFGDVTVLG-DDGEALLT 61 Query: 83 IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKI 142 I M AE P LSGEIR++ M +D P + + + G +W + + V+LE + Sbjct: 62 IARFRMDAELAPYLSGEIRIYSMTVDTPDIRVPVLADGTIDWVVERPAIPRGATVVLENV 121 Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202 V+ G + + + + + + L DLN + LS S+ G V G+ + Sbjct: 122 AVENGTVTVENGLTGRTHRLEDLN-----------ATLSAGSLAGPVDGRGSIVVGGEVI 170 Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL-- 260 AF + + + ++I+ + L G+ + +P ++G +V Sbjct: 171 AFSVGIGTLQEGGDLPVRIETANETLATSLTLDGSASLKDGRPGFAGSIAVTRPLPPASV 230 Query: 261 ----------------------LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 + + + G +S +S ++Q+ Sbjct: 231 TAEELAAPDPFAAAAPEAAGEAASERPAVMPVKAVGAIVLSPTAAEVSDIRVQAGEATRP 290 Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 + + + + G + D + + + + Sbjct: 291 YLLTGEGRFDFAGIPKFHLTLEGEQIDVDRIAAEENGDASQVLGLAE 337 >gi|115524154|ref|YP_781065.1| hypothetical protein RPE_2141 [Rhodopseudomonas palustris BisA53] gi|115518101|gb|ABJ06085.1| AsmA family protein [Rhodopseudomonas palustris BisA53] Length = 1188 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 126/326 (38%), Gaps = 14/326 (4%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ L+G+ + L+ A P FIDW FR FE +A +G + V G + +LP Sbjct: 1 MQATLLGIATAAILALIAALVGPYFIDWNQFRPRFEAEAARAIGAPVRVAGELDARLLPT 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P++ + + + D + + L + L+ GE+ ++ I L+ L ++G Sbjct: 61 PTLRLRQVVVGGAND-PGRVRADRLDVEFSLGSLMRGEVHASELTIGGFALDLGLDAQGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W + + + ++++++ GRI + D L+D+ Sbjct: 120 LDWPAA-TAFTSLGALAIDRLNLT-GRIALHDARRRSTLELNDI-----------AFSGE 166 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + ++ G++ +G D R F++ +N N L+ L + DL G Sbjct: 167 VKALAGAIRGDGNFLVDGTRYPFRLWSNRAGDNAGSRLRFALESSERGWMADLEGLFSVE 226 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 + P + G ++A ++ + RL+G K R + + S+ Sbjct: 227 ARTPRFDGALTLASVAARTPAEPTPSTPWRLTGKLKADPAGARFDQVEASFGAEASALRF 286 Query: 302 DNKTKVSQDEENLLNFSENGAESMHD 327 + + L+ S + + D Sbjct: 287 AGQAEARFGAAPELSASLSARQLDLD 312 >gi|163796970|ref|ZP_02190926.1| AsmA [alpha proteobacterium BAL199] gi|159177717|gb|EDP62268.1| AsmA [alpha proteobacterium BAL199] Length = 1223 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 57/374 (15%), Positives = 120/374 (32%), Gaps = 47/374 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR++LIGL ++ VP F+DW ++ + + A G+ + ++G I + ILP Sbjct: 5 LRKLLIGLAITVVALIAAVLVVPSFVDWNGYKPEIQNAAKKATGRDLRLEGDIGLSILPS 64 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 PS+ + + E G +++ L + LPLLSG++ V + + +P + + Sbjct: 65 PSLSVEKVAFANIEGGSEPQMVRLDSLRVHVALLPLLSGKVHVTSVTLIKPTIVLEKMAD 124 Query: 120 GVSNWFQR--------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 G NW + L+ ++ G + D + + L Sbjct: 125 GRVNWEFPVDGDAGAPASGGSGSGGAGSAPAIALDSAKIEDGTLLFRDAAGGTEHRIEAL 184 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 N+ ++ ++G +GT + + +A + +K + Sbjct: 185 NV-----------TVAAGGLQGPFDVDGTFKYQGMPMTLQASAGRLDTQRPNPVKAVISA 233 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS---------------KLLNLELSAKKS 270 + + G+L P + G SV + + ++ Sbjct: 234 AENALTATVSGSLDMT-GGPAFKGDASVDAPDLGKAVERLTAALGGAGPAVAPIGAGQRL 292 Query: 271 RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330 + + S V +S + V+ ++ G D Sbjct: 293 SVKSSVDGSPKAVNLSDLVVTLGES----RLQGNIAVALAGGPSVDAKLTGNRLDLDALL 348 Query: 331 TDFFEEEEKKNKND 344 + K Sbjct: 349 PSAKASDTAPPKTT 362 >gi|254229866|ref|ZP_04923271.1| AsmA protein [Vibrio sp. Ex25] gi|262393757|ref|YP_003285611.1| AsmA protein [Vibrio sp. Ex25] gi|151937635|gb|EDN56488.1| AsmA protein [Vibrio sp. Ex25] gi|262337351|gb|ACY51146.1| AsmA protein [Vibrio sp. Ex25] Length = 695 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 55/431 (12%), Positives = 133/431 (30%), Gaps = 62/431 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L+ L V+LV + +F++ F+ QA G ++ ++G I P Sbjct: 1 MKKLLLILAIPIVVILVAILALTIFVNPNQFKPLIVEQAQKQTGLELVIEGDISWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K++ + + +PL S ++ + ++ +D Sbjct: 61 IGFELGHTELRNPQGFSKPNLFKVDTVGVDISVMPLFSQQLEIGNVTLDGAEFYIETKKD 120 Query: 120 GVSNWFQ---------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 G N ++ L + V G +++ D+++ Sbjct: 121 GSKNIDALTKAQTQQAEQASDTAPTQNGETQPAGSDWSINLAGVTVSNGSLEMQDKQAGS 180 Query: 159 VYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------------ 202 L D++L +S + + + A+G +F ++ Sbjct: 181 YTKLYDISLNLSEFAFDNWTTADFGVKGEMNDQKFTAKGQADFKLEKGLANYALKNINFD 240 Query: 203 -----------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 + I + +K +L + A + +D+ G + + I Sbjct: 241 ATYSDPANKIESATIGLDTFEFDKVNNLTYAMKGDAGGMKLDMQGAGQLSVDKAISKVQL 300 Query: 252 SVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 S L S K + + +S + L+ + N+ D K V+ Sbjct: 301 DKLTLKSTFEGDALPQSPMKVDMVSDLSFDLTKNHLS-FVLEKLTANA-IALDGKADVTL 358 Query: 310 DEENLLNFSENGAESMHDL------NETDFFEE--EEKKNKNDDLKKDDIQYSVNKKEEK 361 + + F+ + D +++ + + + D+ + Sbjct: 359 GDIPKVRFALHSPNIDLDEFLGLDQQDSEGNKPASGGESAPAGSEVEPDLSALKTLDVKG 418 Query: 362 DNSHDKENQEN 372 D + DK N Sbjct: 419 DITIDKFKAAN 429 >gi|304392197|ref|ZP_07374139.1| putative AsmA [Ahrensia sp. R2A130] gi|303296426|gb|EFL90784.1| putative AsmA [Ahrensia sp. R2A130] Length = 1253 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 71/330 (21%), Positives = 131/330 (39%), Gaps = 24/330 (7%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI 83 P F+DW F++ FE +A+ ++G+ + V G K +LP PSV F ++ + +G+ + Sbjct: 22 PPFVDWGQFKDRFEAEASRVIGQPVRVSGRTKAKLLPLPSVTFTEVSVG--PEGAPLLRA 79 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF---QRKSTMDMIHNVILE 140 + E PLL G++R+ DM +D P L+ L+ +G W V +E Sbjct: 80 STFHVNVELAPLLKGDVRIVDMAMDGPQLDIALNEEGRLVWPEGSDNPRVPLRAEEVAVE 139 Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200 I + G++++ D S +V L++++ SA D++ G EG D Sbjct: 140 TITITNGQLRLSDSRSGRVIELAEVDAIASA-----------DTLIGPWRGEGKFTRDGI 188 Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL 260 R+ F ++ I+LK+ L P P L G + ++ P + G+ V + Sbjct: 189 RNRFSASSGQWKSAGRITLKLDLEPQDQPYDYALDGTFRFQKRVPAFDGIARVKRAGNPS 248 Query: 261 LNLELS--------AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312 +S A +L + +I+ G +KL + + Sbjct: 249 DADRISFPRVDRATALPVQLEADVQIATGGATFPAFKLDIGSAIDPYTVTGTAQAVFAQR 308 Query: 313 NLLNFSENGAESMHDLNETDFFEEEEKKNK 342 G + E + E + + Sbjct: 309 LNYRVEAEGQQINLARLEAASPQSEGQSAQ 338 >gi|254470183|ref|ZP_05083587.1| conserved hypothetical protein [Pseudovibrio sp. JE062] gi|211960494|gb|EEA95690.1| conserved hypothetical protein [Pseudovibrio sp. JE062] Length = 1349 Score = 170 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 77/331 (23%), Positives = 125/331 (37%), Gaps = 22/331 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + V I +G + LV A PL IDW+ +R FE I+G ++ + G + +LP Sbjct: 1 MNSVYITVGGTLILALVIALVGPLVIDWSAYRSLFESYGEKILGHQVTILGETDVQLLPA 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P V D+R+ ED I+G R E LL GE+ V +M +++P LN L G Sbjct: 61 PYVKLSDVRVGAVED--PLMTIKGFEGRIELPSLLRGEVHVTEMKLNEPELNLSLDEGGR 118 Query: 122 SNWFQRKSTMD-----MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 + Q S ++ILE + V+ G I + D + +V + NL++ A Sbjct: 119 LDVLQTNSRRSVISEIDPTSLILEDVSVRNGSIVLTDARTGEVRRAGNANLELYA----- 173 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 ++G AEG ++ KI + +N I +K Q+ P G Sbjct: 174 ------GGLQGPFKAEGAMLYEGVPYTLKIGSGRLERNGQIRVKTQVSPANVAAQFSTDG 227 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 L Y G V S+ + A K F + + ++ L+ + Sbjct: 228 FLRHQNGVVSYYGDAEVQSVTSEGSDDLEWAGK----SKFNLDGERLELTESTLRLGSED 283 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + S E + D Sbjct: 284 RPITAEGGGVYSFGPEPEFQAVAQFKQVDLD 314 >gi|269967342|ref|ZP_06181403.1| AsmA protein [Vibrio alginolyticus 40B] gi|269828050|gb|EEZ82323.1| AsmA protein [Vibrio alginolyticus 40B] Length = 695 Score = 169 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 56/431 (12%), Positives = 132/431 (30%), Gaps = 62/431 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L+ L V+LV + +F++ F+ QA G ++ ++G I P Sbjct: 1 MKKLLLILAIPIVVILVAILALTIFVNPNQFKPLIVEQAQKQTGLELVIEGDISWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K++ + + +PL S ++ + ++ +D Sbjct: 61 IGFELGHTELRNPQGFSKPNLFKVDTVGVDISVMPLFSQQLEIGNVTLDGAEFYIETKKD 120 Query: 120 GVSNWFQ---------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 G N T ++ L + V G +++ D+++ Sbjct: 121 GSKNIDALTKAQTQQAEQESNAAPTQNGETQTSGSDWSINLAGVTVSNGSLEMQDKQAGS 180 Query: 159 VYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------------ 202 L D++L +S + + A+G +F ++ Sbjct: 181 YTKLYDISLNLSEFAFDNWTTADFGAKGEMNDQKFTAKGQADFKLEKGLANYALKNINFD 240 Query: 203 -----------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 + I + +K +L + +A + +D+ G + + I Sbjct: 241 ATYSDPANKIESATIGLDTFEFDKVNNLTYAIKGVAGGMKLDMQGAGQLSVDKAISKVQL 300 Query: 252 SVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 S L S K + + +S + L+ + N+ D K V+ Sbjct: 301 DKLTLKSTFEGDALPQSPMKVDMVSDLSFDLTKNHLS-FVLEKLTANA-IALDGKADVTL 358 Query: 310 DEENLLNFSENGAESM------HDLNETDFFEE--EEKKNKNDDLKKDDIQYSVNKKEEK 361 + + F+ + D + + + + D+ + Sbjct: 359 GDIPKVRFALHSPNIDLDEFLGLDKQAAEGNKPASGGESAPAGPEVEPDLSALKTLDVKG 418 Query: 362 DNSHDKENQEN 372 D + DK N Sbjct: 419 DITIDKFKAAN 429 >gi|307944870|ref|ZP_07660207.1| conserved hypothetical protein [Roseibium sp. TrichSKD4] gi|307771794|gb|EFO31018.1| conserved hypothetical protein [Roseibium sp. TrichSKD4] Length = 1353 Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 70/316 (22%), Positives = 125/316 (39%), Gaps = 22/316 (6%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED 76 L+ A P F+DWT +R FER A ++G + V G + +LP PS+ F D+R+ E+ Sbjct: 2 LMTALVGPYFVDWTLYRSTFERYAERVLGHPVTVLGEADMRLLPAPSITFSDVRVGAAEN 61 Query: 77 GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST-----M 131 + M+ E PL+ GE++V D+ +D+PHL L G +W Sbjct: 62 --PLLVVSRFQMQVELPPLMKGEVKVRDLQLDRPHLQLSLDESGRLDWLTAMPETGVLAS 119 Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA 191 +V E + + G + ++D + + + NL +SAR S++G Sbjct: 120 LNADDVAFENVAITNGALSVVDARTGETFRFEGGNLSLSAR-----------SLEGPFKL 168 Query: 192 EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 +GT D + + + +N +I LK Q+ P +P+ + L G L P + G F Sbjct: 169 DGTIALDQEPYSISMATGRQQENGSIRLKGQVTPTRFPVDLGLDGLLSHENASPQFEGAF 228 Query: 252 SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE 311 +++ E LSG + + + ++ + + Sbjct: 229 NLSSIQ----APEDVDTAWTLSGQVEADMAELEVPEFEYRFGPQERQLSMTGTADLVYSG 284 Query: 312 ENLLNFSENGAESMHD 327 + D Sbjct: 285 ARRFEVRTRSKQIDLD 300 >gi|269962052|ref|ZP_06176406.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833136|gb|EEZ87241.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 695 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 58/431 (13%), Positives = 130/431 (30%), Gaps = 62/431 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L+ + +L + +F++ F+ QA G ++ ++G I P Sbjct: 1 MKKLLLIIAIPIVAILAVILGLVIFVNPNQFKPLIVEQAQKQTGLELVIEGDISWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + PLLS ++ + ++ +D Sbjct: 61 IGFELGRTELRNPQGFSQPNLFKVETVGVDVSVTPLLSKQLEIGNVTLDGAEFYLETLKD 120 Query: 120 GVSNW---------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 G N + + L + + G ++I D+++ Sbjct: 121 GTKNIDALTKAQTQQAEQTTDAAPEQAADSQSAASDWTINLAGVSISNGYVEIQDKQAGS 180 Query: 159 VYFLSDLNLQISA----RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK--------- 205 LSD++L +S + + + + + A+G +F + Sbjct: 181 YTKLSDISLNLSQFAFDNWTTAGFGVKGEMNEQTFTAQGKADFKLAKGLASYALKNINFD 240 Query: 206 --------------ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 I +K +L L A + +D+ G + I Sbjct: 241 ATYSDATNKIESATIGLETFEFDKVNNLSYALKGEAGGMKLDMQGGGELTVDKAISKVQL 300 Query: 252 SVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + S L S K ++ + +S + L+ + N+ D K V+ Sbjct: 301 NKLTLNSTFEGDALPQSPMKVDMASDLSFDLTKSHLS-FVLEKLTANA-IALDGKADVTL 358 Query: 310 DEENLLNFSENGAESMHDL-----NETDF---FEEEEKKNKNDDLKKDDIQYSVNKKEEK 361 + + F+ + D N+ K + D+ + Sbjct: 359 GDIPKVRFAVHSPNIDLDEFLGLNNQASGGDKPASSGSKAPAGPEVEPDLSALKTLDVKG 418 Query: 362 DNSHDKENQEN 372 D + DK N Sbjct: 419 DITIDKFKAAN 429 >gi|91227379|ref|ZP_01261768.1| AsmA protein [Vibrio alginolyticus 12G01] gi|91188643|gb|EAS74933.1| AsmA protein [Vibrio alginolyticus 12G01] Length = 695 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 55/431 (12%), Positives = 131/431 (30%), Gaps = 62/431 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L+ L V+LV + +F++ F+ QA G ++ ++G I P Sbjct: 1 MKKLLLILAIPIVVILVAILALTIFVNPNQFKPLIVEQAQKQTGLELVIEGDISWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K++ + + +PL S ++ + ++ +D Sbjct: 61 IGFELGHTELRNPQGFSKPNLFKVDTVGVDISVMPLFSQQLEIGNVTLDGAEFYIETKKD 120 Query: 120 GVSNWFQ---------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 G N T ++ L + V G +++ D+++ Sbjct: 121 GSKNIDALTKAQTQQAEQENNAAPTQNGETQTSGSDWSINLAGVTVSNGSLEMQDKQAGS 180 Query: 159 VYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------------ 202 L D++L +S + + + A+G +F ++ Sbjct: 181 YTKLYDISLNLSEFAFDNWTTADFGVKGEMNDQKFTAKGQADFKLEKGLANYALKNINFD 240 Query: 203 -----------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 + I + + +L + A + +D+ G + + I Sbjct: 241 ATYSDPANKIESATIGLDTFEFDTVNNLTYAIKGDAGGMKLDMQGAGQLSVDKAISKVQL 300 Query: 252 SVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 S L S K + + +S + L+ + N+ D K V+ Sbjct: 301 DKLTLKSTFEGDALPQSPMKVDMVSDLSFDLTKNHLS-FVLEKLTANA-IALDGKADVTL 358 Query: 310 DEENLLNFSENGAESM------HDLNETDFFEE--EEKKNKNDDLKKDDIQYSVNKKEEK 361 + + F+ + D + + + + D+ + Sbjct: 359 GDIPKVRFALHSPNIDLDEFLGLDKQAAEGNKPASGGESAPAGPEVEPDLSALKTLDVKG 418 Query: 362 DNSHDKENQEN 372 D + DK N Sbjct: 419 DITIDKFKAAN 429 >gi|153835352|ref|ZP_01988019.1| AsmA protein [Vibrio harveyi HY01] gi|148868123|gb|EDL67285.1| AsmA protein [Vibrio harveyi HY01] Length = 695 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 60/431 (13%), Positives = 131/431 (30%), Gaps = 62/431 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L+ + +L + +F++ F+ QA G ++ + G I P Sbjct: 1 MKKLLLIIAIPIVAILAVILGLVIFVNPNQFKPLIVEQAQKQTGLELVIDGDISWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + PL S ++ + ++ +D Sbjct: 61 IGFELGRTELRNPQGFSQPNLFKVETVGVDVSVTPLFSKQLEIGNVTLDGAEFYLETLKD 120 Query: 120 GVSNW---------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 G N + + L + + G ++I D+++ Sbjct: 121 GSKNIDALTKAQTQQAEKNTEATPEQAADSQSTASDWTINLAGVTISNGYVEIQDKQAGS 180 Query: 159 VYFLSDLNLQISAR----FLNIISPLSIDSIKGSVIAEGTGNFDNKRS------------ 202 LSD++L +S + + + + A+G +F + Sbjct: 181 YTKLSDISLNLSQFAFDSWTTADFGVKGEMNDQTFTAQGKADFKLAKGLTSYALKNINFD 240 Query: 203 -----------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 + I +KA +L L A + +D+ G N + I Sbjct: 241 ATYRDPANKIESATIGLETFEFDKANNLSYALKGEAGGMKLDMQGGGKLNVDKAISKVQL 300 Query: 252 SVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + S L S K ++ + +S + L+ + N+ D K V+ Sbjct: 301 NKLTLNSTFEGDALPQSPMKVDMASDLSFDLTKSHLS-FVLEKLTANA-IALDGKADVTL 358 Query: 310 DEENLLNFSENGAESMHD----LNETDFFEE----EEKKNKNDDLKKDDIQYSVNKKEEK 361 E + F+ + D LN+ + + D+ + Sbjct: 359 GEIPKVRFAVHSPNIDLDEFLGLNKQAQAGDQPASGGNSAPAGPEVEPDLSALKTLDVKG 418 Query: 362 DNSHDKENQEN 372 D + DK N Sbjct: 419 DITIDKFKAAN 429 >gi|238897288|ref|YP_002922965.1| suppressor of ompF assembly mutants [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465043|gb|ACQ66817.1| suppressor of ompF assembly mutants [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 609 Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 43/380 (11%), Positives = 115/380 (30%), Gaps = 34/380 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++++ + ++ G + + ++ DFR +Q G ++A++G ++ H+ P Sbjct: 1 MKKLMTVFIIVLVLLAGGMTALVVLLNPNDFRGYLAQQIEKRSGYQLALEGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 SV + + + + + E PLLS +++V + + +N Sbjct: 61 LSVIAGQMSLTAPGAKKSIISAQNMRLDVELWPLLSHQLKVKQVSLKGARINLI------ 114 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + T + V E++ S+ + + L S Sbjct: 115 --PESQPKTPKNLPTVSKEEVDSDHAS------TSNWKLGIDKVQLMDSLLIWQKEDEAQ 166 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 I+ ++ + + N ++ +SLK + YP D Sbjct: 167 INVRNVNLDL-VQNENKQVKISLLSQINRDQRDLTVSLKAAVDLHQYPQKWDADIQ---- 221 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 + + G + ++ + L + + ++ + ++ Sbjct: 222 ------QLSYQLQGADLPVNGIKGTM---TLQAQYDKPSEKLTFNQLNFSA----NNNHF 268 Query: 302 DNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359 + D L T ++ K + + Sbjct: 269 IGNAEAILSSIPTYLIRLRAQNINLDEILGWTPLKKDNTKNQSTSAVTVPTPVIATTTDN 328 Query: 360 EKDNSHDKENQENFSGDKMI 379 +D S + + +F+ D ++ Sbjct: 329 NEDLSQNLQVLRDFNTDFLL 348 >gi|328474601|gb|EGF45406.1| AsmA protein [Vibrio parahaemolyticus 10329] Length = 695 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 60/431 (13%), Positives = 130/431 (30%), Gaps = 62/431 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L+ L V + + +F++ F+ QA G ++ ++G I P Sbjct: 1 MKKLLLVLAIPVVVFVAAILALTIFVNPNQFKPLIVEQAQKQTGLELVIEGDISWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K++ + + PL S ++ + ++ +D Sbjct: 61 IGFELGRTELRNPQGFSQPNLFKVDTVGVDVSVTPLFSKQLEIGNITLDGAEFYVETKKD 120 Query: 120 GVSNWFQ---------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 G N + ++ L + V G ++I D+++ Sbjct: 121 GSKNIDAFTKAQTQQAEQPKDTAPEPSGESQSAGSDWSINLAGVTVSNGSLEIQDKQAGN 180 Query: 159 VYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------------ 202 L D++L +S R+ + + AEG +F + Sbjct: 181 YTKLYDVSLNLSEFAFDRWTTADFGMKGEMNDQKFTAEGKADFKLAKGLASYALKNINVD 240 Query: 203 -----------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 + KI + +K +L L A + +D+ G Q I + Sbjct: 241 ATYTDPNNTIESAKIGLDTFEFDKVNNLSYALKGSAAGMKLDMQGGGQLTVDQAISKVLL 300 Query: 252 SVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + S L S K + + +S + L+ + N+ D K V+ Sbjct: 301 NKLTLKSSFEGDALPQSPMKVDMVSDLSFDLNKSHLS-FILEKLTANA-IALDGKADVTL 358 Query: 310 DEENLLNFSENGAESMHDLN--------ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361 + + F + D ++ K + D+ + Sbjct: 359 GDIPKIRFDLHSPNIDLDEFLGLDKQAPASEKPASGGKSASAGPEVEPDLSALKTLDVKG 418 Query: 362 DNSHDKENQEN 372 D + DK N Sbjct: 419 DITIDKFKAAN 429 >gi|156975196|ref|YP_001446103.1| hypothetical protein VIBHAR_02923 [Vibrio harveyi ATCC BAA-1116] gi|156526790|gb|ABU71876.1| hypothetical protein VIBHAR_02923 [Vibrio harveyi ATCC BAA-1116] Length = 695 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 60/431 (13%), Positives = 129/431 (29%), Gaps = 62/431 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L+ + +L + +F++ F+ QA G ++ + G I P Sbjct: 1 MKKLLLIIAIPIVAILAVILGLVIFVNPNQFKPLIVEQAQKQTGLELVIDGDISWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + PL S ++ + ++ +D Sbjct: 61 IGFELGRTELRNPQGFSQPNLFKVETVGVDVSVTPLFSKQLEIGNVTLDGAEFYLETLKD 120 Query: 120 GVSNW---------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 G N + + L + + G ++I D+++ Sbjct: 121 GTKNIDALTKAQTQQAEKNTEATPEQAADSQSTASDWTINLAGVTISNGYVEIQDKQAGS 180 Query: 159 VYFLSDLNLQISA----RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK--------- 205 LSD++L +S + + + + A+G +F + Sbjct: 181 DTKLSDISLNLSQFAFDNWATADFGVKGEMNDQTFTAQGKADFKLAKGLASYALKNINFD 240 Query: 206 --------------ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 I +KA +L L A + +D+ G N + I Sbjct: 241 ATYRDPANKIESATIGLETFEFDKANNLSYALKGEAGGMKLDMQGGGELNVDKAISKVQL 300 Query: 252 SVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + S L S K ++ + +S + L+ + N+ D K V+ Sbjct: 301 NKLTLNSTFEGDALPQSPMKVDMASDLSFDLTKSHLS-FVLEKLTANA-IALDGKADVTL 358 Query: 310 DEENLLNFSENGAESMHD----LNETDFFEE----EEKKNKNDDLKKDDIQYSVNKKEEK 361 E + F+ + D LN+ + + D+ + Sbjct: 359 GEIPKVRFAVHSPNIDLDEFLGLNQQASAGGKSASDGNSAPAGPEVEPDLSALKTLDVKG 418 Query: 362 DNSHDKENQEN 372 D DK N Sbjct: 419 DIKIDKFKAAN 429 >gi|163802871|ref|ZP_02196760.1| uridine kinase [Vibrio sp. AND4] gi|159173411|gb|EDP58234.1| uridine kinase [Vibrio sp. AND4] Length = 697 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 58/429 (13%), Positives = 131/429 (30%), Gaps = 56/429 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L+ + +L + +F++ F+ QA G ++ + G I P Sbjct: 1 MKKLLLIIAIPIVAILAVILGLVIFVNPNQFKPLIVEQAQKQTGLELVIDGDISWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + PLLS ++ + ++ +D Sbjct: 61 IGFELGRTELRNPQGFSQPNLFKVETVGVDVSVAPLLSKQLEIGNVTLDGAEFYLETLKD 120 Query: 120 GVSNW---------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 G N + + L + + G ++I D+++ Sbjct: 121 GTKNIDALTKAQTQQAEKTTEATPERAADSKSAASDWTINLAGVTISNGYVEIQDKQASS 180 Query: 159 VYFLSDLNLQISAR----FLNIISPLSIDSIKGSVIAEGTGNFDNKRS------------ 202 LSD++L +S + + + + A+G +F + Sbjct: 181 YTKLSDISLNLSQFAFDSWTTADFGMKGEMNDQTFTAQGKADFKLAKGLTSYALKNVNFD 240 Query: 203 -----------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 + I +K +L L A + +D+ G N + I Sbjct: 241 ATYRDPANKIESATIGLETFEFDKVNNLSYALKGDAGGMKLDMQGGGELNVDKAISKVQL 300 Query: 252 SVAGDFSKL--LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + S L S K ++ + +S + L+ + N+ D K V+ Sbjct: 301 NKLTLNSTFEGEALPQSPMKVDMASDLSFDLTKSHLS-FVLEKLTANA-IALDGKADVTL 358 Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD-DIQYSVNKKEEKDNSHDKE 368 E + F+ + D ++ N N + + + + + Sbjct: 359 GEIPKVRFAVHSPNIDLDEF-LGLNQQAPAGNGNKPVSGGKNESVGQEVEPDLSVLKTLD 417 Query: 369 NQENFSGDK 377 Q + DK Sbjct: 418 LQGDIGIDK 426 >gi|300021794|ref|YP_003754405.1| AsmA family protein [Hyphomicrobium denitrificans ATCC 51888] gi|299523615|gb|ADJ22084.1| AsmA family protein [Hyphomicrobium denitrificans ATCC 51888] Length = 1335 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 63/376 (16%), Positives = 121/376 (32%), Gaps = 24/376 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + L+ L +VL F VP F+DW +R FE +A+ ++G+ + V G + + LP Sbjct: 1 MNNGLLFFAGLLVLVLSALFAVPSFVDWNGYRGVFEEEASKVLGRDVRVGGAVNLRFLPA 60 Query: 62 PSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 P V F +RI G + + M LL G + ++ + +P L Sbjct: 61 PYVQFDKVRIANVTGQTGEPFVRADSFKMWLSASALLRGVLEASEIELSKPVLTLVADKA 120 Query: 120 GVSNWFQ----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 G NW + + L+ + + G + + + +++V + D+N Sbjct: 121 GGGNWSNITLRSADLPFVPRELALKSVRLSEGTVSLYNATAERVAHVEDIN--------- 171 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 LS + + G +G ++ PA++ +I LKI P + L Sbjct: 172 --GELSAEGLTGPFRFKGNASWLGAAHGVAFATEAPARDGSIGLKISARSTGSPDVYLLN 229 Query: 236 GNLFWNEKQPIYSGVFS------VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 G++ P + G ++ V ++ + A L + Sbjct: 230 GHVSDLANNPSFKGEWTGTVTMPVYEASARADASKDDATLLDLKAEVSGDLSAAQFDNIT 289 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349 L + L+ D + K +L Sbjct: 290 LSLNAGAEPQMITGSAVATWASPARLDLKLASKWLDIDRL-AGAGQGSASFAKLKELGIG 348 Query: 350 DIQYSVNKKEEKDNSH 365 +Q + Sbjct: 349 LMQSVAGDSTASTKIN 364 >gi|260903214|ref|ZP_05911609.1| AsmA family protein [Vibrio parahaemolyticus AQ4037] gi|308106553|gb|EFO44093.1| AsmA family protein [Vibrio parahaemolyticus AQ4037] Length = 608 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 59/431 (13%), Positives = 130/431 (30%), Gaps = 62/431 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L+ L V + + +F++ F+ QA G ++ ++G I P Sbjct: 1 MKKLLLVLAIPVVVFVAAILALTIFVNPNQFKPLIVEQAQKQTGLELVIEGDISWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K++ + + PL S ++ + ++ +D Sbjct: 61 IGFELGRTELRNPQGFSQPNLFKVDTVGVDVSVTPLFSKQLEIGNITLDGAEFYVETKKD 120 Query: 120 GVSNWFQ---------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 G N + ++ L + V G ++I D+++ Sbjct: 121 GSKNIDALTKAQTQQAEQPNDTAPDQSGESQSAGSDWSINLAGVTVSNGSLEIQDKQAGN 180 Query: 159 VYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------------ 202 L D++L +S + + + AEG +F + Sbjct: 181 YTKLYDVSLNLSEFAFDSWTTADFGMKGEMNDQKFTAEGKADFKLAKGLASYALKNINVD 240 Query: 203 -----------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 + KI + +K +L L A + +D+ G Q I + Sbjct: 241 ATYTDPNNTIESAKIGLDTFEFDKVNNLSYALQGSAAGMKLDMQGGGQLTVDQAISKVLL 300 Query: 252 SVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + S L S K + + +S + L+ + N+ D K V+ Sbjct: 301 NKLTLKSSFEGDALPQSPMKVDMVSDLSFDLNKSHLS-FILEKLTANA-IALDGKADVTL 358 Query: 310 DEENLLNFSENGAESMHDLN--------ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361 + + F+ + D ++ K + D+ + Sbjct: 359 GDIPKIRFALHSPNIDLDEFLGLDKQAPASEKPASGGKSASAGPEVEPDLSALKALDVKG 418 Query: 362 DNSHDKENQEN 372 D + DK N Sbjct: 419 DITIDKFKAAN 429 >gi|323498219|ref|ZP_08103221.1| AsmA protein [Vibrio sinaloensis DSM 21326] gi|323316647|gb|EGA69656.1| AsmA protein [Vibrio sinaloensis DSM 21326] Length = 706 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 65/424 (15%), Positives = 134/424 (31%), Gaps = 65/424 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ + + +L + L ++ F+ QA L G +A++G I P Sbjct: 1 MKKLFLFVAIPIVAILGAILALVLLVNPNQFKPMIVEQAKLQTGLDLAIEGDIGWKFFPS 60 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + E S K++ + PL S ++ + ++ +D ++ Sbjct: 61 IGFELGQTELRNPEGFSQLNMLKVDSAMIEVSVTPLFSKQLEIGNIVLDGAQVSIETLKD 120 Query: 120 GVSNWFQR---------------------------KSTMDMIHNVILEKIHVKGGRIKII 152 G N S+ + L + + + + Sbjct: 121 GRKNIDALTKAQSAQAEQPQAQQETAPANSEPKADDSSPAAEWTIHLAGVSISNAAVDVQ 180 Query: 153 DQESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------ 202 D ++ L D+NL +S R+++ + + +G F+ + Sbjct: 181 DLQAGSFTKLYDVNLSLSEFEFNRWVSADFGAKGELNQQKFATQGHAEFNLAKGFAEFAL 240 Query: 203 -----------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 + K++ + +KA L L A + ID+ G+ + Sbjct: 241 RNIELDSSFSDPSTQMDSIKLSLDTFEFDKANQLSYALKGKAAELAIDMKGSASLTVDKV 300 Query: 246 IYSGVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 I S + L L S K ++ + +S + LQS+ N+ D Sbjct: 301 ISKLEMSALTLDANLEGDSLPQSPMKVDMASDLTFDLTKSHLS-FVLQSLTANA-LAFDG 358 Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ---YSVNKKEE 360 K ++ + + FS + D E ++ K D SV K+ E Sbjct: 359 KADITLADIPKVRFSLHSPNIDLD--EFLGLKQASAKPAESDQTAPQESSKPASVEKEVE 416 Query: 361 KDNS 364 D S Sbjct: 417 PDLS 420 >gi|28898840|ref|NP_798445.1| AsmA protein [Vibrio parahaemolyticus RIMD 2210633] gi|153839835|ref|ZP_01992502.1| AsmA protein [Vibrio parahaemolyticus AQ3810] gi|260364841|ref|ZP_05777419.1| AsmA family protein [Vibrio parahaemolyticus K5030] gi|260879486|ref|ZP_05891841.1| AsmA protein [Vibrio parahaemolyticus AN-5034] gi|260898215|ref|ZP_05906711.1| AsmA protein [Vibrio parahaemolyticus Peru-466] gi|28807059|dbj|BAC60329.1| AsmA protein [Vibrio parahaemolyticus RIMD 2210633] gi|149746642|gb|EDM57630.1| AsmA protein [Vibrio parahaemolyticus AQ3810] gi|308088393|gb|EFO38088.1| AsmA protein [Vibrio parahaemolyticus Peru-466] gi|308093507|gb|EFO43202.1| AsmA protein [Vibrio parahaemolyticus AN-5034] gi|308113952|gb|EFO51492.1| AsmA family protein [Vibrio parahaemolyticus K5030] Length = 695 Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 59/431 (13%), Positives = 130/431 (30%), Gaps = 62/431 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L+ L V + + +F++ F+ QA G ++ ++G I P Sbjct: 1 MKKLLLVLAIPVVVFVAAILALTIFVNPNQFKPLIVEQAQKQTGLELVIEGDISWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K++ + + PL S ++ + ++ +D Sbjct: 61 IGFELGRTELRNPQGFSQPNLFKVDTVGVDVSVTPLFSKQLEIGNITLDGAEFYVETKKD 120 Query: 120 GVSNWFQ---------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 G N + ++ L + V G ++I D+++ Sbjct: 121 GSKNIDALTKAQTQQAEQPNDTAPDQSGESQSAGSDWSINLAGVTVSNGSLEIQDKQAGN 180 Query: 159 VYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------------ 202 L D++L +S + + + AEG +F + Sbjct: 181 YTKLYDVSLNLSEFAFDSWTTADFGMKGEMNDQKFTAEGKADFKLAKGLASYALKNINVD 240 Query: 203 -----------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 + KI + +K +L L A + +D+ G Q I + Sbjct: 241 ATYTDPNNTIESAKIGLDTFEFDKVNNLSYALQGSAAGMKLDMQGGGQLTVDQAISKVLL 300 Query: 252 SVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + S L S K + + +S + L+ + N+ D K V+ Sbjct: 301 NKLTLKSSFEGDALPQSPMKVDMVSDLSFDLNKSHLS-FILEKLTANA-IALDGKADVTL 358 Query: 310 DEENLLNFSENGAESMHDLN--------ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361 + + F+ + D ++ K + D+ + Sbjct: 359 GDIPKIRFALHSPNIDLDEFLGLDKQAPASEKPASGGKSASAGPEVEPDLSALKALDVKG 418 Query: 362 DNSHDKENQEN 372 D + DK N Sbjct: 419 DITIDKFKAAN 429 >gi|85058953|ref|YP_454655.1| putative assembly protein [Sodalis glossinidius str. 'morsitans'] gi|84779473|dbj|BAE74250.1| outer membrane assembly protein [Sodalis glossinidius str. 'morsitans'] Length = 601 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 59/389 (15%), Positives = 117/389 (30%), Gaps = 52/389 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+L L L VV+ G + I+ DFR Q G +A++G ++ H P Sbjct: 1 MRRLLTTLFILLVVVVAGLTAMVALINPNDFRSYMIMQVEQRSGYHLALEGDLRWHAWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ ++I E + + PLLS ++ V + + + S Sbjct: 61 LSILAGRMKITAPGATVPLVSAENMRLDVALWPLLSHQLLVKQVMLKGAVITLTPDSAAR 120 Query: 122 S-------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + + + + V + I +++++ L DLNLQ+ Sbjct: 121 RPENAPIAPVGTPEPVEGNGWSWNIGSLQVAD-SLLIWQRDANEQLNLRDLNLQMKQDDA 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 S F N ++ A+SL L YP + Sbjct: 180 RKAS-----------------------IEFSGRLNHDQRDLAVSLNGSLDLSQYPRQVSA 216 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 + + + + +E + ++ + + + + Sbjct: 217 YMD----------KFNYRLRASGLLEQGIEGGG---AFNADYSAVNQTLTLGGLTFSA-- 261 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKKDD 350 + ++ + E+ + D L E +N+N + Sbjct: 262 --NDSELSGQISARLGEQPVYQLDLAAKTLNLDTLLGLQPLTDDNEARAQNQNAGSGRPV 319 Query: 351 IQYSVNKKEEKDNSHDKENQENFSGDKMI 379 I S N +D Q N S +I Sbjct: 320 IANSALTDNALSNLNDFNGQLNLSAQNVI 348 >gi|320156801|ref|YP_004189180.1| AsmA protein [Vibrio vulnificus MO6-24/O] gi|319932113|gb|ADV86977.1| AsmA protein [Vibrio vulnificus MO6-24/O] Length = 702 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 56/419 (13%), Positives = 126/419 (30%), Gaps = 59/419 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ + L +VV++ A + ++ F+ Q G ++ ++G I+ P Sbjct: 1 MKKLFLILAAPIAVVVMAAIALVTLVNPNQFKPLITEQVAKQTGLELVIEGDIEWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL +++ D+ +D + Sbjct: 61 IGFSLGKTELKNPQGFSQENLFKVENVGIDISVMPLLDKVLQIGDVRLDGAEFHLETRKD 120 Query: 120 GVSNW-------------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQ 154 G N +++ + L I V ++ D+ Sbjct: 121 GQKNIDALTQQQKAQQETAQQEVRSEPTTDAPQQAGAAAEWRIELAGISVSNAKLVNQDR 180 Query: 155 ESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKR--------- 201 ++ L D+N +S ++ + + A G F + Sbjct: 181 QAGTSLELYDVNFSLSEFAFEQWTKAEFSAKGKNNQQQFSANGKLEFQLAQDFSSYALRN 240 Query: 202 --------------SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 K+ + +K +L ++ A + + G+ + I Sbjct: 241 IELNSQFSDPATKMDNIKLVLDTFEFDKDNALTFEIKGQASGMDLSANGSAQLHVDAAIS 300 Query: 248 SGVFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 + + +L S K +S +S L + N+ D K Sbjct: 301 TVMVKAFQLESQLNGESLPQSPMKVAMSSEVTFDVPRSHLS-LVLNKLTANA-IALDGKA 358 Query: 306 KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364 V+ E + FS + E D + ++ + D N + E D S Sbjct: 359 DVTLAEIPQVRFSLHSPEIDLDEF-LGLTQPSQETASTNSSNDKDAHPEANNEVEPDLS 416 >gi|326424120|ref|NP_761822.2| AsmA protein [Vibrio vulnificus CMCP6] gi|319999502|gb|AAO11349.2| AsmA protein [Vibrio vulnificus CMCP6] Length = 702 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 56/419 (13%), Positives = 126/419 (30%), Gaps = 59/419 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ + L +VV++ A + ++ F+ Q G ++ ++G I+ P Sbjct: 1 MKKLFLILAAPIAVVVMAAIALVTLVNPNQFKPLITEQVAKQTGLELVIEGDIEWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL +++ D+ +D + Sbjct: 61 IGFSLGKTELKNPQGFSQENLFKVESVGIDISVMPLLDKVLQIGDVRLDGAEFHLETRKD 120 Query: 120 GVSNW-------------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQ 154 G N +++ + L I V ++ D+ Sbjct: 121 GQKNIDALTQQQKVQQETAQQEVSSEPTTDAPQQAGAAADWRMELAGITVSNAKLVNQDR 180 Query: 155 ESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKR--------- 201 ++ L D+N +S ++ + + A G F + Sbjct: 181 QAGTSLELYDVNFSLSEFAFKQWTKAEFSAKGKNNQQQFSANGKLEFQLAQDFSSYALRN 240 Query: 202 --------------SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 K+ + +K +L ++ A + + G+ + I Sbjct: 241 IELNSQFSDPATKMDNIKLVLDTFEFDKDNALTFEIKGQASGMDLSANGSAQLHVDAAIS 300 Query: 248 SGVFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 + + +L S K +S +S L + N+ D K Sbjct: 301 TVMVKAFQLESQLNGESLPQSPMKVAMSSEVTFDVPRSHLS-LVLNKLTANA-IALDGKA 358 Query: 306 KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364 V+ E + FS + E D + ++ + D N + E D S Sbjct: 359 DVTLAEIPKVRFSLHSPEIDLDEF-LGLTQPSQETASTNSSNDKDAHPEANNEVEPDLS 416 >gi|261253530|ref|ZP_05946103.1| AsmA protein [Vibrio orientalis CIP 102891] gi|260936921|gb|EEX92910.1| AsmA protein [Vibrio orientalis CIP 102891] Length = 715 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 52/422 (12%), Positives = 127/422 (30%), Gaps = 61/422 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ + + +L + + ++ F+ QA G + ++G I P Sbjct: 1 MKKLFLFIAIPIVAILGAVIALVVLVNPNQFKPLIVEQAKTHTGLDLVIEGDISWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K++ + + +PL S ++ + ++ +D + Sbjct: 61 IGFELGQTELRNPQGFEQLNMFKVDTVGIDVSVMPLFSQQLEIGNITLDGAAFSLETLKD 120 Query: 120 GVSNWFQR----------------------------KSTMDMIHNVILEKIHVKGGRIKI 151 G N + + + L + V ++I Sbjct: 121 GSKNIDALTQAQTAAAESAPVDAESTSAAQTQTESTQQSAAPAWTINLAGVTVSNASVEI 180 Query: 152 IDQESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS----- 202 D+++ L D++L +S + + ++ + A+G F + Sbjct: 181 QDKQAGSFTKLYDVSLNLSEFAVDTWTKVDFAAKGEANQQKFSAQGDAEFKLAKGFKEYA 240 Query: 203 ------------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 + KI +KA +L + A + ID+ G N + Sbjct: 241 LRNINLDASFSDAATQIESAKIGLETFEFDKANALTYAVVGKAAGLDIDMKGAASLNVDK 300 Query: 245 PIYSGVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 I + + + L S K ++ + +S + L+ + N+ D Sbjct: 301 AITKVMMNQLTLDATFEGDSLPQSPMKVDMASDLSFDLTKNHLS-FVLEKLTANA-LAFD 358 Query: 303 NKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKD 362 K ++ + + FS + D +E K ++ + S K Sbjct: 359 GKADITLADIPKVRFSLHSPNIDLDEFLGLGQTQESKASETNSETAPANSESKTAKTSPK 418 Query: 363 NS 364 Sbjct: 419 KP 420 >gi|307130144|ref|YP_003882160.1| putative assembly protein [Dickeya dadantii 3937] gi|306527673|gb|ADM97603.1| predicted assembly protein [Dickeya dadantii 3937] Length = 604 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 104/333 (31%), Gaps = 48/333 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+ L L V+ G + + I+ DFR RQ G ++ + G ++ H+ P Sbjct: 1 MRRLFTTLVILLVVLAAGMTALVVLINPNDFRAYMVRQVETRTGYRLNLDGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ ++ + + E + + + PLLS ++ V + + + S+ Sbjct: 61 LSILSGNLSVSAPGAATPVISAENMRLDVKLWPLLSHQLEVKQVMLKGAVIRLTSDSEAR 120 Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + + ++ V + + + V + D+NL + + Sbjct: 121 VAGPVPIAPGGTSSPEPETPWRFDINRVEVADSLLVF-QRGNAPVLNVRDINLTMESDSA 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 R + N ++ + SL L YP I Sbjct: 180 R-----------------------QVRVSLSSRFNRDQRDLSFSLNAMLDMQNYPQQIGA 216 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 + S + + G + K L G+++ + IS++ L + Sbjct: 217 D----------VGSVSYQLQGAGLPTEGIS---GKGTLRGSYQRQPEKLTISQFALSA-- 261 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 +S+ + + + D Sbjct: 262 --NSSQLNGSLSTTFGVTPEYVLDLQSEKLDLD 292 >gi|37679446|ref|NP_934055.1| putative AsmA protein [Vibrio vulnificus YJ016] gi|37198190|dbj|BAC94026.1| putative AsmA protein [Vibrio vulnificus YJ016] Length = 718 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 56/419 (13%), Positives = 125/419 (29%), Gaps = 59/419 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ + L +VV++ A + ++ F+ Q G ++ ++G I+ P Sbjct: 17 MKKLFLILAAPIAVVVMAAIALVTLVNPNQFKPLITEQVAKQTGLELVIEGDIEWQFFPS 76 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL +++ D+ +D Sbjct: 77 IGFSLGKTELKNPQGFSQENLFKVENVGIDISVMPLLDKVLQIGDVRLDGAEFYLETRKD 136 Query: 120 GVSNW-------------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQ 154 G N ++ + L I V ++ D+ Sbjct: 137 GQKNIDALTQQQKAQQETAQQEVSSEPTTDAPQQPGAAADWRMELAGITVSNAKLVNQDR 196 Query: 155 ESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKR--------- 201 ++ L D+N +S ++ + + A G F + Sbjct: 197 QAGTSLELYDVNFSLSEFAFDQWTKAEFSAKGKNNQQQFSANGKLEFQLAQDFSSYALRN 256 Query: 202 --------------SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 K+ + +K +L ++ A + + G+ + I Sbjct: 257 IELNSQFSDPATKMDNIKLVLDTFEFDKDNALTFEIKGQASGMDLSANGSAQLHVDAAIS 316 Query: 248 SGVFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 + + +L S K +S + +S L + N+ D K Sbjct: 317 TVMVKAFQLESQLNGKSLPQSPMKVAMSSEVTFDVPSSHLS-LVLNKLTANA-IALDGKA 374 Query: 306 KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364 V+ E + FS + E D + ++ + D N + E D S Sbjct: 375 DVTLAEIPKVRFSLHSPEIDLDEF-LGLTQPSQETASTNSSNDKDAHPEANNEVEPDLS 432 >gi|315122504|ref|YP_004062993.1| hypothetical protein CKC_03780 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495906|gb|ADR52505.1| hypothetical protein CKC_03780 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 336 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 153/295 (51%), Positives = 208/295 (70%), Gaps = 11/295 (3%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70 FL SV+L+GAF++P FI WTDF+E ERQA+L +GKKI V+G I++ ILPFP++ F+DI Sbjct: 27 FLLSVLLLGAFSIPFFISWTDFQEKIERQASLFIGKKIVVRG-IEVSILPFPAIVFRDIG 85 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK----------G 120 IDQ+++GSFES+I+ +S+ F PLL GEIRV DM+ID+P++ FYL Sbjct: 86 IDQRDNGSFESRIKKISINVHFFPLLFGEIRVCDMHIDRPYVTFYLPKNKGMFNVSKESN 145 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 N S M MIHN++LEK H+ GRI+IIDQESD+ YF+S LNL+ISA L+I SPL Sbjct: 146 KVNSSHENSIMAMIHNIVLEKSHIDEGRIQIIDQESDKSYFISGLNLEISANILDISSPL 205 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 SI+SIKG + EG G +++ +S+FKI A PA+N + LK+Q+ L Y I+ D GN FW Sbjct: 206 SINSIKGFIGVEGRGKYEDNKSSFKIMATLPAQNNSFPLKVQIASLDYSIVFDFNGNFFW 265 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 ++K PIY+GVFS G SKLL L++ + S++SG+F SD ++RI YKLQS Sbjct: 266 DQKNPIYTGVFSAYGHISKLLPLKIPIEWSKVSGDFDFSDWHMRIEHYKLQSGSL 320 >gi|74318272|ref|YP_316012.1| hypothetical protein Tbd_2254 [Thiobacillus denitrificans ATCC 25259] gi|74057767|gb|AAZ98207.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 632 Score = 160 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 108/338 (31%), Gaps = 27/338 (7%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M RR L F+VV+ + +W R+ ER G+++ + G +K+ + Sbjct: 1 MARRALKWFAISFAVVVAAVLILFALPNWNALRDPIERLVAEKTGRELRIGGDLKVRLAW 60 Query: 61 FPSVFFK--DIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 P++ D+ I ++ E +PLL G++ D+ +D+ ++ Sbjct: 61 PPAIRIGAADVSFANPSWAAQKNMLDIGQVAFHVELVPLLGGDLVFADVRLDRAEVDLEK 120 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 S+ G NW + D V+++ + V GR+ D ++ ++ A Sbjct: 121 SADGRKNWLLDREQRDEEARVVVKHVSVSDGRVAYSDPAAETSLRARVATVRPDAGET-- 178 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP--AKNKAISLKIQLFPLAYPIIIDL 234 G + + G + + + + + + ++ + Sbjct: 179 ---------TGGLRFDVEGRYKGEPIVARGSGESVLGLREQQEPYRLAVAGRVGQTRASA 229 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYK 289 G + K VAG L + R +G R ++ Sbjct: 230 AGRITNLLKPSAVDLQIKVAGASLGHLYPLIGTVFPRTPPYETAGRLIHRGSLWRYENFR 289 Query: 290 LQSILPNSSTDEDNKTKVSQ-DEENLLNFSENGAESMH 326 + + +V + E +L + + Sbjct: 290 GRVGKSD----VAGTLQVDRAGERPVLAATLRSDKLDL 323 >gi|319786360|ref|YP_004145835.1| AsmA family protein [Pseudoxanthomonas suwonensis 11-1] gi|317464872|gb|ADV26604.1| AsmA family protein [Pseudoxanthomonas suwonensis 11-1] Length = 667 Score = 160 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 52/332 (15%), Positives = 105/332 (31%), Gaps = 29/332 (8%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68 LG+ + + + + LF DW F+ ER G++ + G + + + +V Sbjct: 34 LGWTLAALGIAILLLVLFFDWNWFKGPLERAVGSATGREFRIGGDLDVDLGRTITVSADQ 93 Query: 69 IRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV-SNWF 125 + + E E + + PLL+ +R+ ++ + + + G NW Sbjct: 94 LTLSNAEWSKEPRMGAAERVEIDIAAWPLLALRLRMKEIRAVRTDIWLETNPDGEGGNWE 153 Query: 126 QRKST--MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 D LE++ + GR++ + +D++L +++ S Sbjct: 154 FGDDHSDPDEDPRWRLERLWIDDGRLRFTNASER-----TDIDLALASIEGGDRST---- 204 Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWN 241 V +G G++ + A P + + +I L A G L Sbjct: 205 ---APVAVKGNGHWRGAAFRMEGQAASPLELADTDTPYRIDLDARAGRTRASATGTLTNP 261 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPN 296 + + +AG + L L L G + + R +K + Sbjct: 262 FRFQTFDLQMKLAGADLEELYPLLGLALPASPPYALDGRLRRNGDVWRYEGFKGTVGDSD 321 Query: 297 SSTDEDNKTKVS-QDEENLLNFSENGAESMHD 327 KV E L + D Sbjct: 322 ----LSGDVKVDVSGERPLFVAQLLSRKLDLD 349 >gi|218459405|ref|ZP_03499496.1| hypothetical protein RetlK5_07897 [Rhizobium etli Kim 5] Length = 372 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 114/253 (45%), Gaps = 12/253 (4%) Query: 75 EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134 DG+ ++E SM AE P LSGE +FDM + P + L G +W + Sbjct: 1 ADGTPIVRVEQFSMDAELAPFLSGEALIFDMRVVNPKVRLRLLKDGTLDWMRGSRAEIPA 60 Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 V+LE +HV GG ++ ID +S + ++ LN ++SA+ S+ G EG Sbjct: 61 KTVVLENVHVSGGEVEFIDDQSGRGRRITGLNAEMSAK-----------SLAGPWRIEGD 109 Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254 D + F I+++ P + + ++ +L P P+ +DL G L +++P Y G S A Sbjct: 110 AALDGEHGNFSISSSQPDEKGVLRMRTKLSPDKQPVSVDLDGELKLVDRKPNYQGQLSAA 169 Query: 255 -GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313 + + + + + R+ G F++++ +RI Y+++ + + + Sbjct: 170 IENRNSAKSANKNEQPPRVKGRFELTNERIRIPEYRMEIGPTDDPYVITGEATLDTGNAP 229 Query: 314 LLNFSENGAESMH 326 + +G + Sbjct: 230 EFLLTADGQQIDV 242 >gi|323493152|ref|ZP_08098283.1| AsmA protein [Vibrio brasiliensis LMG 20546] gi|323312623|gb|EGA65756.1| AsmA protein [Vibrio brasiliensis LMG 20546] Length = 713 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 51/407 (12%), Positives = 125/407 (30%), Gaps = 63/407 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L+ + +L + ++ F+ QA G + + G I P Sbjct: 1 MKKLLLIIAIPVIAILGAIIALVTLVNPNQFKPLIVEQAKTQTGLDLVIDGDISWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K++ + + +PL S ++ + ++ +D Sbjct: 61 VGFELGQTELRNPKGFEQLNMFKVDTVGIDVSVMPLFSQQLEIGNITLDGAAFALETLKD 120 Query: 120 GVSNWFQ--------------------------RKSTMDMIHNVILEKIHVKGGRIKIID 153 G N T + L + + + + D Sbjct: 121 GTRNIDALTQAQTAQAETPTATDAPAAQTTESSEAPTAASAWTINLAGVTISNASVDVQD 180 Query: 154 QESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------- 202 +++ L D++L +S ++ + ++ + A+G F + Sbjct: 181 KQAGSFTKLYDVSLNLSEFAVEKWTKVAFSAKGENNQQKFSAQGDAEFKLAKGFKEYALR 240 Query: 203 ----------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 + KI +KA +L + A + ID+ G+ + I Sbjct: 241 NINLDASMSDPATNIESAKIGLETFEFDKANALTYSVAGNAAGLDIDMKGSASLTVDKAI 300 Query: 247 YSGVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 + + +K L S K ++ + +S + L+ + N+ D K Sbjct: 301 SKVLMNQLVLDAKFEGDSLPQSPMKVDMASDLSFDLAKSHLS-FVLEKLTANA-LQFDGK 358 Query: 305 TKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLK 347 V+ + + F+ + + D L ++ E+ + K Sbjct: 359 ADVTLADIPKVRFALHSPDIDLDEFLGLQQSASEEKPSASAPESEQK 405 >gi|90424765|ref|YP_533135.1| AsmA [Rhodopseudomonas palustris BisB18] gi|90106779|gb|ABD88816.1| AsmA [Rhodopseudomonas palustris BisB18] Length = 1239 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 63/331 (19%), Positives = 129/331 (38%), Gaps = 18/331 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ L+GL + L+ A PLFIDW FR FE +A +VG + V G + +LP Sbjct: 1 MQTTLLGLAMALIIALIAALVGPLFIDWNQFRPRFEAEAARVVGAPVRVAGALDARLLPT 60 Query: 62 PSVFFKDIRIDQK---EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 P++ + + + + + + L + L+ GE+R ++ + L+ L Sbjct: 61 PTLRLRSVVVGKAGALGQEKGLVRADKLDVEFSLGALMRGEVRATELTVGGLALDLALDP 120 Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 +G +W + + ++++++ GRI + D S + L+D+ Sbjct: 121 QGRLDWPAAS-AFASLGALSIDRLNLT-GRIVLHDAASHRTLELNDI-----------AF 167 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 + GS+ +G +R F+++A P + L + L A +DL G L Sbjct: 168 SGEVRGAAGSLRGDGNFMLAGERMPFRLSAGRPVQGSGTRLHLTLESSARAASLDLEGLL 227 Query: 239 FWNEKQPIYSGVFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 + P + GV ++ A + + RL+ K R + + Sbjct: 228 NVEARVPQFDGVVTLASAAAMAAANADAAAPMPWRLAAKLKADPAAARFDQLEASYGAEA 287 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 ++ ++ L+ + + + D Sbjct: 288 AALRLAGSAELRLGASPQLHVALSARQLDAD 318 >gi|82702310|ref|YP_411876.1| AsmA [Nitrosospira multiformis ATCC 25196] gi|82410375|gb|ABB74484.1| AsmA [Nitrosospira multiformis ATCC 25196] Length = 667 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 111/341 (32%), Gaps = 29/341 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 +++L G ++++ L+ DW + ERQ T G++ ++G + +++ P Sbjct: 6 KQILSISGVALLLLVIAFV---LWFDWNMLKPYIERQVTERTGREFTIRGDLDVNLSLNP 62 Query: 63 SVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 V + + + E G ++ +++R LLSG+I + ++ I +P + S G Sbjct: 63 LVSVEGLSLANAEWGTEQPMVAVDKVAVRISLWDLLSGDIVLPELSITRPRVLLEKSMDG 122 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 NW +K + + + + G++ D ++ + + Sbjct: 123 KRNWDLKKEEKKKMELPQIGQFTLDQGKVLFRDPKTKTDIAAD------------VFTDP 170 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANF--PAKNKAISLKIQLFPLAYPIIIDLFGNL 238 ++D+ + + G F + + + +K I I+ G + Sbjct: 171 AVDAGELPLHVAAEGKFTDLKFTAQAQGGKIMSLADKTIPYPIKASAEMGTTRASADGTI 230 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSA-----KKSRLSGNFKISDGNVRISRYKLQSI 293 + + G+ L +SG D + + Sbjct: 231 KGLAEMAEVDLKLDLHGEDLSALYPVTGIVIFPSPPYHISGRILHHDTEWSMKGFSGNVG 290 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334 + E L + + DL++ F Sbjct: 291 NSD----LGGDIVFDTGGERPL-LRGDVVSKVLDLSDLQGF 326 >gi|148977652|ref|ZP_01814228.1| AsmA protein [Vibrionales bacterium SWAT-3] gi|145963167|gb|EDK28435.1| AsmA protein [Vibrionales bacterium SWAT-3] Length = 711 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 51/383 (13%), Positives = 115/383 (30%), Gaps = 59/383 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++LI + +V+ + L ++ F+ QA G ++ ++G I P Sbjct: 1 MKKLLIFIAVPVFIVVAAILALVLLVNPNQFKPLIVEQAQKHTGLELVIEGDISWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + E K++ + + PL S ++ + ++ +D Sbjct: 61 IGFELGQTELRNPEGFTQPNLFKVDTVGVDVSVTPLFSNQLEIGNITLDGAEFYLETLKD 120 Query: 120 GVSNWFQ--------------------------RKSTMDMIHNVILEKIHVKGGRIKIID 153 G N + ++ + L + + ++ D Sbjct: 121 GRKNIDALTQASASDASAPAAETTSEPAQAPQEQSASEASGWTINLAGVTISNALFEMDD 180 Query: 154 QESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------- 202 +++ L D++L +S + S ++ + A G+ F Sbjct: 181 KQAGSFTKLYDVSLNLSEFAVDTWTTATFAASGENNQQKFSANGSAEFKLAEGFASYALR 240 Query: 203 ----------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 + KI + +K L + A + +DL G + I Sbjct: 241 NIDLNAKFNDPATSIESAKIGLDTFEFDKVNQLTYAVVGKAAGLDLDLKGGGELTVDKAI 300 Query: 247 YSGVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 + S L S K + + +S + L+ + +S D K Sbjct: 301 SKVTLNKLTLDSTFKGDTLPQSPMKVDMLSDLSFDLTKSHLS-FVLEKLQA-NSIALDGK 358 Query: 305 TKVSQDEENLLNFSENGAESMHD 327 V+ + + FS + D Sbjct: 359 ADVTLSDIPKVRFSLHSPNIDLD 381 >gi|306843245|ref|ZP_07475855.1| Alpha-isopropylmalate/homocitrate synthase [Brucella sp. BO2] gi|306286568|gb|EFM58147.1| Alpha-isopropylmalate/homocitrate synthase [Brucella sp. BO2] Length = 1180 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 113/279 (40%), Gaps = 17/279 (6%) Query: 73 QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMD 132 + ++ SM AE +P L G++ +FDM +++P + L G +W R ST Sbjct: 4 GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGKVDWAIRPSTPL 63 Query: 133 MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE 192 + +E++ + G + + ++ S + S LN LS +S+ G A Sbjct: 64 DPTKIRVERLSINDGVVTLREEASGRSDTASALNAV-----------LSANSLAGPWQAN 112 Query: 193 GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS 252 G+ ++ A +++ + + ++ ++ P +P + G++ + + Y+G FS Sbjct: 113 GSFMLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPATFETDGDVTMTDGRLDYAGDFS 172 Query: 253 VAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 + L+ A+K R+SG FK +S ++++ ++ + Sbjct: 173 LRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPADNPYVVNGSAL 232 Query: 307 VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 + + S +G + NET E+ D Sbjct: 233 IDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 271 >gi|4262670|gb|AAD14778.1| AsmA [Escherichia coli] gi|1582055|prf||2117401A asmA gene Length = 379 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 121/391 (30%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF------Y 115 S+ + + + + + + + LPLLS ++ V + + + Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 116 LSSKGV---SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 S + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|299067668|emb|CBJ38877.1| putative outer membrane biogenesis protein, AsmA family [Ralstonia solanacearum CMR15] Length = 737 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 62/420 (14%), Positives = 120/420 (28%), Gaps = 51/420 (12%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58 RV++GLG V++ A L DW + + +G+ A+ G + + Sbjct: 6 RVILGLGITPVVIVATAIVFVLTFDWNRAKPYLNDHVSQAIGRPFAINGDLALTWKKPEG 65 Query: 59 -------LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P + DI I + + ++ L+ E LPLL+ I + + +D Sbjct: 66 ESGWRAYVPWPRLIASDIAIGNPDWARQPHVATVQRLTFVLEALPLLAHRIVIPSVTLDT 125 Query: 110 PHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVKGGRIKIIDQ------------ 154 P + S+ +NW + + + L +I G +++ D+ Sbjct: 126 PMVALERDSQNRNNWTFHFGAQDSQPSDWKLELREIAFSKGSVQLDDEIKRIHLAATLDT 185 Query: 155 ---------ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK 205 S ++ ++ +P + +GT N R + K Sbjct: 186 VDNQALYTAASGTAIRGNEPAAPSASGAAAPAAPDPQQPYGIAWTVKGTYNNAAIRGSGK 245 Query: 206 ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 ++ +Q IDL G L ++G L Sbjct: 246 AGGVLRLQDARRPYPLQADVTVGKTRIDLAGTLTNPSSLTALDLRLHLSGASMAHLYPLT 305 Query: 266 SAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN 316 RL G + + R ++ + + + E Sbjct: 306 GVVLPDTPPFDTRGRLIGELRRQGSSWRYEQFTGRVGGSD----LGGTLTFAMRPEPGQR 361 Query: 317 FSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376 G H L D + ++DD K + D Sbjct: 362 PQLTGELVSHQLLFADLAPIIGADSNASKQRRDDPVRQPADKVLPVEPFRTDRWNAIDAD 421 >gi|226942401|ref|YP_002797474.1| AsmA family protein [Azotobacter vinelandii DJ] gi|226717328|gb|ACO76499.1| AsmA family protein [Azotobacter vinelandii DJ] Length = 677 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 42/373 (11%), Positives = 110/373 (29%), Gaps = 34/373 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 ++L+ + ++ + DW + Q + + + A++G + ++ Sbjct: 6 KILVWALGGLAALIAILVVLVATFDWNRLKPRINAQVSEALKRPFAIEGDLAVNWRRPAE 65 Query: 58 ---ILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112 LP+P + + +R+ + G +E + + L LL +R+ + + P Sbjct: 66 ESGWLPWPRISAEALRLGNPDWAEGERFVSLERVELSLSPLALLGRTVRIPQITLGGPEA 125 Query: 113 NFYLSSKGVSNWFQRK-----STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 + + G +NW + + + + +++ D+ + L Sbjct: 126 SLQRLADGRANWTFEQGDEAEDKKPSPWTLDIGTVQFDRALVRLDDRVLKADLQVEVTPL 185 Query: 168 QISARFLNIISPLSIDSIKG--------SVIAEGTGNFDNKRSAFKITAN--FPAKNKAI 217 F I+ + + G + + + + ++ + Sbjct: 186 GAPIPFEQIVGEAQAGRAARGGGRPQDYAFAWKAQGRYQGQPLSGEGKVGGLLALQDSEL 245 Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RL 272 +Q+ A + G L + ++GD L+ + Sbjct: 246 PFPVQVDLRAGKSRLRAEGTLVSPRTLSVLDLRLRLSGDSLADLHPLIGVTLPDTAAYST 305 Query: 273 SGNFKISDGNVRISRYKLQ--SILPNSSTDEDNKTKVSQDEENLLNFSENGAE-SMHDLN 329 G + Y+ + S S N V+ L+ + DL Sbjct: 306 EGRLSADLRAADGAEYRYRDFSGKIGDSDIHGNLAYVAGKPRPKLSGELTSNQLLFRDLG 365 Query: 330 ETDFFEEEEKKNK 342 + K+ + Sbjct: 366 PLIGADTGTKREE 378 >gi|149188168|ref|ZP_01866463.1| AsmA protein [Vibrio shilonii AK1] gi|148838156|gb|EDL55098.1| AsmA protein [Vibrio shilonii AK1] Length = 702 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 56/435 (12%), Positives = 129/435 (29%), Gaps = 61/435 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L+ L +++V + +F++ F+ Q G ++ + G I P Sbjct: 1 MKKLLLILAIPIVLIVVAIAALVMFVNPNQFKPMITEQVQAQTGLELEISGDISWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + + + +PLL + + + +D ++ Sbjct: 61 LGFELGQTNLKNPQGFKNPNLFSVSQVGVSVGVMPLLDKTLEIGSVTLDGAQVHLETLKD 120 Query: 120 GVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQE 155 G SN ++ ++ L + V ++I ++E Sbjct: 121 GTSNLDALTAASKEAESATAADKAATEPETTSSASAAQGWSISLSGVTVSNALLEISNEE 180 Query: 156 SDQVYFLSDLNLQISA----RFLNIISPLSIDSIKGSVIAEGTGNFDNKR---------- 201 + L D+ L +S ++ L + S A+GT +F + Sbjct: 181 TGSFTKLYDVGLNVSQFAADQWTTADFDLKGQNNDQSFTAKGTADFKLSKDFAEYALKNI 240 Query: 202 -------------SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248 ++T +K S++ + + D G + + + Sbjct: 241 KFDATYQDTVNNVEQAQLTVATFEFDKPNSIEFAVKGKTPDLSFDAKGGTSFEIDKAMTM 300 Query: 249 GVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 S S L L S K +S + + LQ + + + D K Sbjct: 301 LKLSALTLDSTLEGKPLPQSPMKVGMSSDLSFDLKK-NFLNFVLQKLSL-NKMELDGKAT 358 Query: 307 VSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKD 362 V + + FS + D LN+T + + + Sbjct: 359 VQLADIPKVRFSLHSPNIDLDEFLGLNQTQTGNKTANSGGQPTASSGKSAPVKEVEPDLS 418 Query: 363 NSHDKENQENFSGDK 377 + + + + DK Sbjct: 419 ALKGLDVKGSVTIDK 433 >gi|22126523|ref|NP_669946.1| putative assembly protein [Yersinia pestis KIM 10] gi|51595875|ref|YP_070066.1| assembly protein [Yersinia pseudotuberculosis IP 32953] gi|108806817|ref|YP_650733.1| putative assembly protein [Yersinia pestis Antiqua] gi|108812615|ref|YP_648382.1| putative assembly protein [Yersinia pestis Nepal516] gi|145598734|ref|YP_001162810.1| putative assembly protein [Yersinia pestis Pestoides F] gi|149366447|ref|ZP_01888481.1| putative exported protein [Yersinia pestis CA88-4125] gi|153949099|ref|YP_001401420.1| assembly protein [Yersinia pseudotuberculosis IP 31758] gi|162421655|ref|YP_001607549.1| putative assembly protein [Yersinia pestis Angola] gi|165924646|ref|ZP_02220478.1| AsmA protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939600|ref|ZP_02228145.1| AsmA protein [Yersinia pestis biovar Orientalis str. IP275] gi|166009233|ref|ZP_02230131.1| AsmA protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166211557|ref|ZP_02237592.1| AsmA protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167400350|ref|ZP_02305863.1| AsmA protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421840|ref|ZP_02313593.1| AsmA protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423938|ref|ZP_02315691.1| AsmA protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467522|ref|ZP_02332226.1| AsmA protein [Yersinia pestis FV-1] gi|170024775|ref|YP_001721280.1| putative assembly protein [Yersinia pseudotuberculosis YPIII] gi|186894962|ref|YP_001872074.1| putative assembly protein [Yersinia pseudotuberculosis PB1/+] gi|218928667|ref|YP_002346542.1| putative assembly protein [Yersinia pestis CO92] gi|229841507|ref|ZP_04461666.1| predicted assembly protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843618|ref|ZP_04463761.1| predicted assembly protein [Yersinia pestis biovar Orientalis str. India 195] gi|229894280|ref|ZP_04509463.1| predicted assembly protein [Yersinia pestis Pestoides A] gi|229903010|ref|ZP_04518126.1| predicted assembly protein [Yersinia pestis Nepal516] gi|21959522|gb|AAM86197.1|AE013866_7 suppressor of ompF assembly mutants [Yersinia pestis KIM 10] gi|51589157|emb|CAH20777.1| putative exported protein [Yersinia pseudotuberculosis IP 32953] gi|108776263|gb|ABG18782.1| hypothetical protein YPN_2454 [Yersinia pestis Nepal516] gi|108778730|gb|ABG12788.1| hypothetical protein YPA_0820 [Yersinia pestis Antiqua] gi|115347278|emb|CAL20172.1| putative exported protein [Yersinia pestis CO92] gi|145210430|gb|ABP39837.1| hypothetical protein YPDSF_1450 [Yersinia pestis Pestoides F] gi|149290821|gb|EDM40896.1| putative exported protein [Yersinia pestis CA88-4125] gi|152960594|gb|ABS48055.1| AsmA protein [Yersinia pseudotuberculosis IP 31758] gi|162354470|gb|ABX88418.1| AsmA protein [Yersinia pestis Angola] gi|165912516|gb|EDR31148.1| AsmA protein [Yersinia pestis biovar Orientalis str. IP275] gi|165923706|gb|EDR40838.1| AsmA protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165991788|gb|EDR44089.1| AsmA protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166207328|gb|EDR51808.1| AsmA protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960325|gb|EDR56346.1| AsmA protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050299|gb|EDR61707.1| AsmA protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056787|gb|EDR66550.1| AsmA protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751309|gb|ACA68827.1| AsmA family protein [Yersinia pseudotuberculosis YPIII] gi|186697988|gb|ACC88617.1| AsmA family protein [Yersinia pseudotuberculosis PB1/+] gi|229679920|gb|EEO76020.1| predicted assembly protein [Yersinia pestis Nepal516] gi|229689226|gb|EEO81289.1| predicted assembly protein [Yersinia pestis biovar Orientalis str. India 195] gi|229697873|gb|EEO87920.1| predicted assembly protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229703678|gb|EEO90694.1| predicted assembly protein [Yersinia pestis Pestoides A] gi|320015603|gb|ADV99174.1| putative assembly protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 618 Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 44/392 (11%), Positives = 116/392 (29%), Gaps = 58/392 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+L L L V++ G + L ++ DFR +Q G + ++G ++ H+ P Sbjct: 1 MRRLLTMLVILLIVLVAGMSALVLLVNPNDFRAYMVKQVEKKSGYHLQLEGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + E + + + PLLS ++ V + + + S+ Sbjct: 61 LSIIAGRMALTAPGALEPVVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLTPDSEAQ 120 Query: 122 SNWFQR----------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 + + + + ++ + + ++DQ + D+NL++ Sbjct: 121 QQIDAPVAPIAPAGSTPVSDNRGWTLDINRLQIADSLLIWQRSDNDQ-INVRDINLELK- 178 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 G + N ++ S+ I YP Sbjct: 179 ----------------------QGGQRQVQVTLASRVNRNQRDLTFSMVIDADMHQYPRQ 216 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 I + + G + L +++ + +++ Sbjct: 217 FSAN----------ISQFTYKLEGADIPAGGISGGG---ALEASYQSDIQQLLLNQLNFT 263 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 + ++ K + + + D F + K + + Sbjct: 264 A----NNNQLAGSVKATFGDVPDYVVNLTSDNLNLD----AIFGWQPKSSTASTDEAKQP 315 Query: 352 QYSV---NKKEEKDNSHDKENQENFSGDKMIL 380 + + + D + + +F+ ++ Sbjct: 316 VTTAPVIAIQIDDDVGQNLQALRDFTAQTTVV 347 >gi|254507745|ref|ZP_05119876.1| AsmA protein [Vibrio parahaemolyticus 16] gi|219549270|gb|EED26264.1| AsmA protein [Vibrio parahaemolyticus 16] Length = 708 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 55/422 (13%), Positives = 132/422 (31%), Gaps = 61/422 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ + + +L + L ++ F+ QA G ++ + G I P Sbjct: 3 MKKLFLFVAIPIIAILGAILALVLLVNPNQFKPMIIEQAKTQTGLELVIDGDISWQFFPS 62 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + S K++ + + PL + ++ + ++ +D ++ Sbjct: 63 IGLELGQTELRNPQGFSKLNMFKVDSVVIDVSVTPLFNKQLEIGNVVLDGAQVSLETLKD 122 Query: 120 GVSNWFQ----------------------------RKSTMDMIHNVILEKIHVKGGRIKI 151 G N + ++ L + + ++I Sbjct: 123 GRKNIDALTKAQSTQAQTAESSTQEAPSTTEPRATETTPATSDWSIQLAGVTISNAGVEI 182 Query: 152 IDQESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS----- 202 D ++ L D+NL +S ++ ++ + A G F + Sbjct: 183 QDLQAGSFTKLYDVNLSLSEFAFDEWVKADFGAKGETNQQKFAASGHAEFQLAKGFAKYA 242 Query: 203 ------------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 K++ + + A SL ++ A + ID+ G + Sbjct: 243 LRNIKLESSFSDATTKMDTIKLSLDTFEFDAANSLSYEVKGKAADLSIDMTGAATLTVDE 302 Query: 245 PIYSGVFSVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 I V + L S K ++ + +S + L+S+ N+ D Sbjct: 303 AISKVVLDKMSLDASFEGDALPQSPMKVAMASDLTFDLNKSHLS-FVLESLTANA-LAFD 360 Query: 303 NKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKD 362 K +V+ E + F+ + D ++K+ D + +++ E D Sbjct: 361 GKAEVTLAEIPKVRFALHSPNIDLDEFLGLGQAPQDKEQAPSSGSGDSKPATPSEEVEPD 420 Query: 363 NS 364 S Sbjct: 421 LS 422 >gi|331663558|ref|ZP_08364468.1| protein AsmA [Escherichia coli TA143] gi|331059357|gb|EGI31334.1| protein AsmA [Escherichia coli TA143] Length = 617 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 121/391 (30%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF------Y 115 S+ + + + + + + + LPLLS ++ V + + + Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 116 LSSKG---VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 S + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAQRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|227113137|ref|ZP_03826793.1| putative assembly protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 611 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 48/381 (12%), Positives = 116/381 (30%), Gaps = 53/381 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L VV+ G + + ++ DFR +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLAILLVVVVAGMTALVVLVNPNDFRAYMVKQVEERSGYRLQLDGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + E + + + PLLS ++ V + + + S+ Sbjct: 61 LSILSGGMSLSAPGSSAPIVSAENMRLDVQLWPLLSHKLAVKQVMLKGAIIRLTPESEAK 120 Query: 122 S--NWFQRKSTMDMI-----HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 N + + ++KI V + I+ + +++ + D+NL + Sbjct: 121 QSNNAPIAPAGSQTPSEERHWRLDIDKIKVAD-SLLILQRSNNEQINVRDINLAMEQNSD 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 N ++ A SL + L +P ++ Sbjct: 180 R-----------------------QVSIELSSRINRDQRDIAFSLAADVDLLHFPQQVNA 216 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 + + G + + + +++ + S+ L Sbjct: 217 NIT----------KLDYQLQGAGIPANGISGTG---SVQASYQQQPEKITFSQLSLN--- 260 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354 +++ V+ + + D + +E K S Sbjct: 261 -TNNSQLSGAGSVTLGDIPHYELELLSEKLDLD-SLLGIASVKENNAAVVPAKSSAPVIS 318 Query: 355 VNKKEEKDNSHDKENQENFSG 375 E + ++ + F+ Sbjct: 319 ----NESGLAKPEDGLQTFTA 335 >gi|17545492|ref|NP_518894.1| hypothetical protein RSc0773 [Ralstonia solanacearum GMI1000] gi|17427785|emb|CAD14475.1| putative involved in outer membrane biogenesis transmembrane protein [Ralstonia solanacearum GMI1000] Length = 740 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 63/423 (14%), Positives = 120/423 (28%), Gaps = 54/423 (12%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58 RV++GLG V++ A L DW + + VG+ A+ G + + Sbjct: 6 RVILGLGITPIVIVAAAIVFVLTFDWNRAKPYLNDHVSQAVGRPFAINGDLALTWKKPEG 65 Query: 59 -------LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P + DI I + + ++ L+ E LPLL+ I + + +D Sbjct: 66 ESGWRAYVPWPRLIASDIAIGNPDWARQPHVATVQRLTFVLEALPLLAHRIVIPSVTLDT 125 Query: 110 PHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVKGGRIKIIDQE-----SDQVYF 161 P + S+ +NW + + + L +I G +++ D+ + + Sbjct: 126 PMIALERDSQNRNNWTFHFGAQDSQPSDWKLELREIAFSKGSVQLDDEVKRIHLAATLDT 185 Query: 162 LSDLNLQISARFLNIISPLSIDSI-------------------KGSVIAEGTGNFDNKRS 202 + + L +A I + +GT N R Sbjct: 186 VDNQALYTAASGTAIRGSEPAAPSASGAAASTAPAAPDPQQPYGIAWTVKGTYNNAAIRG 245 Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262 + K ++ +Q IDL G L ++G L Sbjct: 246 SGKAGGVLRLQDARRPYPLQADVTVGKTRIDLAGTLTNPSSLTALDLRLHLSGASMAHLY 305 Query: 263 LELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313 RL G + + R ++ + + + E Sbjct: 306 PLTGVVLPDTPPFDTRGRLIGELRRQGSSWRYEQFTGRVGGSD----LGGTLTFAMRPEP 361 Query: 314 LLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENF 373 G H L D + ++D K + Sbjct: 362 GQRPQLTGELVSHQLLFADLAPIIGADSNASKQRRDAPVRQPADKVLPVEPFRTDRWNAI 421 Query: 374 SGD 376 D Sbjct: 422 DAD 424 >gi|254524681|ref|ZP_05136736.1| AsmA family membrane protein [Stenotrophomonas sp. SKA14] gi|219722272|gb|EED40797.1| AsmA family membrane protein [Stenotrophomonas sp. SKA14] Length = 657 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 104/365 (28%), Gaps = 32/365 (8%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIE 84 DW F+ ER G+ + + G + + + +V I + + Sbjct: 45 WDWNWFKGPVERAVQARTGRVLHI-GHLDVDLGRTSTVRADAITFANASWAKQPDMATAD 103 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS-KGVSNWFQRKSTMDMIHNVILEKIH 143 + + PLL G +++ ++ + +P + + KG + L+++ Sbjct: 104 RVEIDVRVWPLLRGSVQLPEVRLTRPDVLLETAPRKGEPGNWDFLGDSAGGPGPQLKRLR 163 Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203 + GR++ +D L ++ +G G + Sbjct: 164 IDDGRLQFLDALGRTDIRLD-----------VRSGQPKQADAAPPLLVQGKGRWQGNPFT 212 Query: 204 FKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261 + P + + +I L A G L + ++ F+++G L Sbjct: 213 LRGGTESPLQLTDSDHPFRIHLDGHAGATHAVASGTLTNPFQLRVFDLQFALSGQDLADL 272 Query: 262 NLELSAKKSR-----LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN 316 L L+G K R ++ + + + Sbjct: 273 YPLLGIAIPSSPPYALNGRLKRDHDTWRYEQFTGKVGDSD----LGGNLQFDVGGARP-R 327 Query: 317 FSENGAESMHDLNETDFF-----EEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371 + D ++ F + + N + K + + + + D ++ Sbjct: 328 LTATLESRRLDFDDLAGFVGAPPKTGSGETANAEQKAEAARIAARARVLPDTPYNLGKLR 387 Query: 372 NFSGD 376 D Sbjct: 388 AMDAD 392 >gi|242238644|ref|YP_002986825.1| assembly protein [Dickeya dadantii Ech703] gi|242130701|gb|ACS85003.1| AsmA family protein [Dickeya dadantii Ech703] Length = 599 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 55/386 (14%), Positives = 120/386 (31%), Gaps = 50/386 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+ L L V+ G + L I+ DFR+ RQ G ++ + G ++ H+ P Sbjct: 1 MRRLFTALIILLVVLAAGMSALVLLINPNDFRDYMVRQVEARTGYRLTLSGELRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + E + + + PLLS ++ + + + + S+ Sbjct: 61 LSILSGGMSLSAPGAAVPVVSAENMRLDVKLWPLLSHQLEIRQVMLKDAVVRLTTESEAR 120 Query: 122 SNWF-------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + D + L ++ + + +S + D+NL + + Sbjct: 121 KAASVPIAPAGSPEPETDSRWHFDLGRVEIVDSLLVFQRGDS-PPINVRDINLTMESVGQ 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 ++AF N + + ++K +L AYP + + Sbjct: 180 R-----------------------QVQAAFSSRINRDQRELSFAMKARLDMQAYPQQVAM 216 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 I S + + G E + + N++ +V I + L + Sbjct: 217 N----------IASLDYQLQGAGVP---PEGIRGQGSMQVNYQRQPESVTIGSFSLTA-- 261 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354 +++ + D ++ + D S Sbjct: 262 --NNSALVGSASAVLGAVPDYQLTLKSERLDVDTL-LGLTQKADGDAGKADKTTAAPVIS 318 Query: 355 VNKKEEKDN-SHDKENQENFSGDKMI 379 + E D D + + DK+I Sbjct: 319 REQTTEPDQALRDFRARVAVAADKLI 344 >gi|50120352|ref|YP_049519.1| putative assembly protein [Pectobacterium atrosepticum SCRI1043] gi|49610878|emb|CAG74323.1| putative outer membrane assembly protein [Pectobacterium atrosepticum SCRI1043] Length = 611 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 45/367 (12%), Positives = 111/367 (30%), Gaps = 49/367 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + + ++ DFR +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLAILLVVLVAGMTALVVLVNPNDFRAYMVKQVEERSGYRLQLDGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + E + + + PLLS ++ V + + + S+ Sbjct: 61 LSILSGGMSLSAPGSSAPIVSAENMRLDVQLWPLLSHKLAVKQVMLKGAIIRLTPESEAK 120 Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + + + + ++KI V + I+ + +++ + D+NL + Sbjct: 121 QSNTAPIAPMGSQAPSEERRWRLDIDKIKVAD-SLLILQRSNNEQINVRDINLAMEQSSD 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 N ++ A SL + L +P ++ Sbjct: 180 R-----------------------QISIELSSRINRDQRDIAFSLAADVDLLHFPQQVNA 216 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 + + G + + +++ + S+ L Sbjct: 217 NIT----------KLDYQLQGAGIPANGIS---GTGSVQASYQQQPEKITFSQLSLN--- 260 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354 +++ V+ + + D + +E +K S Sbjct: 261 -TNNSQLSGVGSVTLGDVPHYELDLLSEKLDLD-SLLGIASVKENNAPTVAVKPSAPVIS 318 Query: 355 VNKKEEK 361 K Sbjct: 319 NESGTAK 325 >gi|260779286|ref|ZP_05888178.1| AsmA protein [Vibrio coralliilyticus ATCC BAA-450] gi|260605450|gb|EEX31745.1| AsmA protein [Vibrio coralliilyticus ATCC BAA-450] Length = 721 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 53/439 (12%), Positives = 131/439 (29%), Gaps = 66/439 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ + + +++ + L ++ F+ QA G ++ ++G I P Sbjct: 1 MKKLFLFIAIPLVIIIGALLALVLLVNPNQFKPLIVEQAQKQTGLELVIEGDISWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PL S ++ + ++ +D Sbjct: 61 IGFELGKTELRNPQGFSQPNMFKVETVGVDVSVMPLFSQQLEIGNITLDGAEFYLETLKD 120 Query: 120 GVSNWFQ-----------------------------RKSTMDMIHNVILEKIHVKGGRIK 150 G N + + L + V ++ Sbjct: 121 GRKNIDALTQAQNTHTEAVTTDAPNTEAPADAAPTESSPSPASAWTINLAGVTVSNAAVE 180 Query: 151 IIDQESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS---- 202 I D+++ L D++L +S + ++ + + A+G+ F + Sbjct: 181 IQDKQAGSYTKLYDVSLNLSEFAVDTWTKADFAAKGENNQQNFTAQGSAEFKLAKGFAEY 240 Query: 203 -------------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243 + K+ +KA +L + A + ID+ G Sbjct: 241 ALRNIDLNASFSDPATEMDSIKLGLETFEFDKANALTYSVAGQAAGLDIDMKGAGALTVD 300 Query: 244 QPIYSGVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 + I V + + L S K ++ + +S + L+ + N+ Sbjct: 301 KAISKVVMNKLTLDATFKGDSLPQSPMKVDMASDLTFDLTKSHLS-FVLEKLTANA-LAF 358 Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361 D K V+ + + F+ + D +F + Q + + Sbjct: 359 DGKADVTLGDIPKVRFALHSPNIDLD----EFLGLNKPAENTSASGTAGTQNTGSTSSSS 414 Query: 362 DNSHDKENQENFSGDKMIL 380 ++ + Q D L Sbjct: 415 ASASASKPQAEVEPDLSAL 433 >gi|227326679|ref|ZP_03830703.1| putative assembly protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 611 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 48/381 (12%), Positives = 118/381 (30%), Gaps = 53/381 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + + ++ DFR +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLAILLVVLVAGMTALVVLVNPNDFRAYMVKQVEERSGYRLQLDGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + E + + + PLLS ++ V + + + S+ Sbjct: 61 LSILSGGMSLSAPGSSAPIVSAENMRLDVQLWPLLSHKLAVKQVMLKGAIIRLTPESEAK 120 Query: 122 S--NWFQRKSTMDMI-----HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 N + + ++KI V + I+ + +++ + D+NL + Sbjct: 121 QANNAPIAPAGSQTPSEERHWRLDIDKIKVAD-SLLILQRSNNEQINVRDINLAMEQNSD 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 N ++ A SL + L +P ++ Sbjct: 180 R-----------------------QVNIELSSRINRDQRDIAFSLAADVDLLHFPQQVNA 216 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 + + G + + + +++ G + S+ L Sbjct: 217 NIT----------KLDYQLQGAGIPANGISGTG---SVQASYQQQPGKITFSQLSLN--- 260 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354 +++ V+ + + D + +E K S Sbjct: 261 -TNNSQLSGAGSVTLGDIPHYELDLLSEKLDLD-SLLGIASVKENNASVVPAKSSAPVIS 318 Query: 355 VNKKEEKDNSHDKENQENFSG 375 E + +++ + F+ Sbjct: 319 ----NESGLTKPEDSLQTFTA 335 >gi|89898901|ref|YP_521372.1| AsmA [Rhodoferax ferrireducens T118] gi|89343638|gb|ABD67841.1| AsmA [Rhodoferax ferrireducens T118] Length = 669 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 39/341 (11%), Positives = 104/341 (30%), Gaps = 25/341 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60 L R L + +V A W R ER A G+ +A+ G +++ + P Sbjct: 12 LPRSLKWIAGAVIAPVVLALLFIAIFGWNWLRAPIERMALEKTGRVLAINGDLRVTLGWP 71 Query: 61 FPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 P + + + + + + LL ++ ++ +++P + + Sbjct: 72 RPRLRANAVTFANPLWTQEKQMLAADAVEITLDLSQLLGRKLVFPELRLERPVVFLEQGT 131 Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 +G +W + D + ++++ + G + D +L + Sbjct: 132 EGRKSWLLDQQQQDPGARIQIDRLTLDQGTLGYDDAVQKTSIRAELASL----------T 181 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANF--PAKNKAISLKIQLFPLAYPIIIDLFG 236 P + + + G + + + ++++ + + + G Sbjct: 182 PPAGSTADTGLTFSAHGRYKGQALTAQGNGGPVLALRDESTPYPLTIDASVGHTRVRAEG 241 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-----GNFKISDGNVRISRYKLQ 291 ++ K +++GD L L G+ S + R ++ + Sbjct: 242 SVTSLLKFTAVDLALALSGDNLAQLYPLLGITFPATRSYVTAGHLLHSGNSWRYEKFSGR 301 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETD 332 + +V + + S+ DL + Sbjct: 302 IGTSD----IAGSLQVKTGGQRP-ALTAELTSSVLDLADLG 337 >gi|253687684|ref|YP_003016874.1| AsmA family protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754262|gb|ACT12338.1| AsmA family protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 611 Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 44/363 (12%), Positives = 110/363 (30%), Gaps = 49/363 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + + ++ DFR +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLAILLVVLVAGMTALVVLVNPNDFRAYMVKQVEERSGYRLQLDGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + E + + + PLLS ++ V + + + S+ Sbjct: 61 LSILSGGMSLSAPGSSAPIVSAENMRLDVQLWPLLSHKLAVKQVMLKGAIIRLTPESEAK 120 Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + + + ++KI V + I+ + +++ + D+NL + Sbjct: 121 QANNAPIAPAGSQAPSEERRWRLDIDKIKVAD-SLLILQRSNNEQINVRDINLAMEQNSD 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 N ++ A SL + L +P ++ Sbjct: 180 R-----------------------QVNIELSSRINRDQRDIAFSLAADVDLLRFPQQVNA 216 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 F + G + + + +++ + S+ L Sbjct: 217 NIT----------KLDFQLQGAEIPPGGISGTG---SVQASYQQQPEKITFSQLSLN--- 260 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354 +++ V+ + + + D + + +K S Sbjct: 261 -TNNSQLSGAGSVTLGDIPHYDLDLLSEKLDLD-SLLGIEVVKGNSTSKAPVKSSTPVIS 318 Query: 355 VNK 357 Sbjct: 319 NES 321 >gi|194436197|ref|ZP_03068299.1| AsmA protein [Escherichia coli 101-1] gi|253773004|ref|YP_003035835.1| assembly protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162056|ref|YP_003045164.1| putative assembly protein [Escherichia coli B str. REL606] gi|297518931|ref|ZP_06937317.1| putative assembly protein [Escherichia coli OP50] gi|300899779|ref|ZP_07117999.1| AsmA family protein [Escherichia coli MS 198-1] gi|300928188|ref|ZP_07143729.1| AsmA family protein [Escherichia coli MS 187-1] gi|301026347|ref|ZP_07189797.1| AsmA family protein [Escherichia coli MS 196-1] gi|194424925|gb|EDX40910.1| AsmA protein [Escherichia coli 101-1] gi|242377715|emb|CAQ32476.1| predicted assembly protein AsmA [Escherichia coli BL21(DE3)] gi|253324048|gb|ACT28650.1| AsmA family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973957|gb|ACT39628.1| predicted assembly protein [Escherichia coli B str. REL606] gi|253978151|gb|ACT43821.1| predicted assembly protein [Escherichia coli BL21(DE3)] gi|299879738|gb|EFI87949.1| AsmA family protein [Escherichia coli MS 196-1] gi|300356658|gb|EFJ72528.1| AsmA family protein [Escherichia coli MS 198-1] gi|300463783|gb|EFK27276.1| AsmA family protein [Escherichia coli MS 187-1] gi|323961753|gb|EGB57355.1| AsmA family protein [Escherichia coli H489] gi|323972786|gb|EGB67985.1| AsmA family protein [Escherichia coli TA007] Length = 617 Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|315618157|gb|EFU98748.1| protein asmA [Escherichia coli 3431] Length = 617 Score = 153 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|300921732|ref|ZP_07137898.1| AsmA family protein [Escherichia coli MS 182-1] gi|301329932|ref|ZP_07222653.1| AsmA family protein [Escherichia coli MS 78-1] gi|300421870|gb|EFK05181.1| AsmA family protein [Escherichia coli MS 182-1] gi|300844031|gb|EFK71791.1| AsmA family protein [Escherichia coli MS 78-1] Length = 617 Score = 153 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|74312589|ref|YP_311008.1| putative assembly protein [Shigella sonnei Ss046] gi|73856066|gb|AAZ88773.1| suppressor of ompF assembly mutants [Shigella sonnei Ss046] Length = 621 Score = 153 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSVLVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|187732274|ref|YP_001879815.1| putative assembly protein [Shigella boydii CDC 3083-94] gi|331683748|ref|ZP_08384344.1| protein AsmA [Escherichia coli H299] gi|187429266|gb|ACD08540.1| AsmA protein [Shigella boydii CDC 3083-94] gi|331078700|gb|EGI49902.1| protein AsmA [Escherichia coli H299] Length = 617 Score = 153 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|291283306|ref|YP_003500124.1| putative assembly protein AsmA [Escherichia coli O55:H7 str. CB9615] gi|312967298|ref|ZP_07781514.1| protein asmA [Escherichia coli 2362-75] gi|168986332|dbj|BAG11872.1| predicted assembly protein [Escherichia coli O55:H7] gi|168986448|dbj|BAG11986.1| predicted assembly protein AsmA [Escherichia coli O55:H6] gi|290763179|gb|ADD57140.1| Predicted assembly protein AsmA [Escherichia coli O55:H7 str. CB9615] gi|312288106|gb|EFR16010.1| protein asmA [Escherichia coli 2362-75] gi|320657487|gb|EFX25285.1| putative assembly protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663303|gb|EFX30608.1| putative assembly protein [Escherichia coli O55:H7 str. USDA 5905] Length = 617 Score = 153 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|193069267|ref|ZP_03050223.1| AsmA protein [Escherichia coli E110019] gi|194428760|ref|ZP_03061296.1| AsmA protein [Escherichia coli B171] gi|192957400|gb|EDV87847.1| AsmA protein [Escherichia coli E110019] gi|194413207|gb|EDX29493.1| AsmA protein [Escherichia coli B171] Length = 617 Score = 153 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 124/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 +++ + +V+ E+ + D LNET E + Sbjct: 264 ----NNSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|251790449|ref|YP_003005170.1| putative assembly protein [Dickeya zeae Ech1591] gi|247539070|gb|ACT07691.1| AsmA family protein [Dickeya zeae Ech1591] Length = 604 Score = 153 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 106/327 (32%), Gaps = 48/327 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+L L L V+ G + + I+ DFR R+ G ++ + G ++ H+ P Sbjct: 1 MRRLLTALVILLVVLAAGMTALVVLINPNDFRAYMVRKVEARTGYRLNLDGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ ++ + + E + + + PLLS ++ V + + + S+ Sbjct: 61 LSILSGNLSVSAPGAAAPVISAENMRLDVKLWPLLSHQLEVKQVMLKGAVIRLTPDSEAK 120 Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 S + + ++ V + + + V + D+NL++ + Sbjct: 121 VAGPAPIAPAGSSVSEPETPWRFDVNRVEVADSVLVF-QRGNAPVLNVRDINLKMESDDT 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 R + N ++ + SL L YP I Sbjct: 180 R-----------------------QVRVSLSSRFNRDQRDLSFSLDALLDMQNYPQQIGA 216 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 I S + + G + K + G+++ + ++++ L + Sbjct: 217 D----------IGSVNYQLQGAGLPTEGIS---GKGAIRGSYQRQPEKLTVNQFTLSA-- 261 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENG 321 +++ + + + Sbjct: 262 --NNSQLNGSLSATFGTTPEYVLALQS 286 >gi|293410428|ref|ZP_06654004.1| asmA [Escherichia coli B354] gi|291470896|gb|EFF13380.1| asmA [Escherichia coli B354] Length = 617 Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|218690122|ref|YP_002398334.1| putative assembly protein [Escherichia coli ED1a] gi|218427686|emb|CAR08594.2| putative inner membrane protein involved in outer membrane protein assembly [Escherichia coli ED1a] gi|332343845|gb|AEE57179.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 617 Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|193062919|ref|ZP_03044012.1| AsmA protein [Escherichia coli E22] gi|260844675|ref|YP_003222453.1| putative assembly protein AsmA [Escherichia coli O103:H2 str. 12009] gi|192931562|gb|EDV84163.1| AsmA protein [Escherichia coli E22] gi|257759822|dbj|BAI31319.1| predicted assembly protein AsmA [Escherichia coli O103:H2 str. 12009] Length = 617 Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|16130004|ref|NP_416568.1| predicted assembly protein [Escherichia coli str. K-12 substr. MG1655] gi|89108884|ref|AP_002664.1| predicted assembly protein [Escherichia coli str. K-12 substr. W3110] gi|157155494|ref|YP_001463417.1| putative assembly protein [Escherichia coli E24377A] gi|170019609|ref|YP_001724563.1| putative assembly protein [Escherichia coli ATCC 8739] gi|170081694|ref|YP_001731014.1| assembly protein [Escherichia coli str. K-12 substr. DH10B] gi|188491815|ref|ZP_02999085.1| AsmA protein [Escherichia coli 53638] gi|215487287|ref|YP_002329718.1| putative assembly protein [Escherichia coli O127:H6 str. E2348/69] gi|238901254|ref|YP_002927050.1| putative assembly protein [Escherichia coli BW2952] gi|256017764|ref|ZP_05431629.1| putative assembly protein [Shigella sp. D9] gi|260856047|ref|YP_003229938.1| putative assembly protein AsmA [Escherichia coli O26:H11 str. 11368] gi|293446420|ref|ZP_06662842.1| asmA [Escherichia coli B088] gi|300816691|ref|ZP_07096912.1| AsmA family protein [Escherichia coli MS 107-1] gi|309792944|ref|ZP_07687372.1| AsmA family protein [Escherichia coli MS 145-7] gi|312973688|ref|ZP_07787860.1| protein asmA [Escherichia coli 1827-70] gi|331653492|ref|ZP_08354493.1| protein AsmA [Escherichia coli M718] gi|331668760|ref|ZP_08369608.1| protein AsmA [Escherichia coli TA271] gi|332278782|ref|ZP_08391195.1| AsmA protein [Shigella sp. D9] gi|2506899|sp|P28249|ASMA_ECOLI RecName: Full=Protein AsmA; Flags: Precursor gi|1736768|dbj|BAA15917.1| predicted assembly protein [Escherichia coli str. K12 substr. W3110] gi|1788378|gb|AAC75125.1| predicted assembly protein [Escherichia coli str. K-12 substr. MG1655] gi|157077524|gb|ABV17232.1| AsmA protein [Escherichia coli E24377A] gi|168986389|dbj|BAG11928.1| predicted assembly protein AsmA [Escherichia coli O55:H7] gi|169754537|gb|ACA77236.1| AsmA family protein [Escherichia coli ATCC 8739] gi|169889529|gb|ACB03236.1| predicted assembly protein [Escherichia coli str. K-12 substr. DH10B] gi|188487014|gb|EDU62117.1| AsmA protein [Escherichia coli 53638] gi|215265359|emb|CAS09754.1| predicted assembly protein [Escherichia coli O127:H6 str. E2348/69] gi|238862170|gb|ACR64168.1| predicted assembly protein [Escherichia coli BW2952] gi|257754696|dbj|BAI26198.1| predicted assembly protein AsmA [Escherichia coli O26:H11 str. 11368] gi|260448836|gb|ACX39258.1| AsmA family protein [Escherichia coli DH1] gi|291323250|gb|EFE62678.1| asmA [Escherichia coli B088] gi|300530921|gb|EFK51983.1| AsmA family protein [Escherichia coli MS 107-1] gi|308123230|gb|EFO60492.1| AsmA family protein [Escherichia coli MS 145-7] gi|309702388|emb|CBJ01710.1| putative outer membrane assembly protein [Escherichia coli ETEC H10407] gi|310332283|gb|EFP99518.1| protein asmA [Escherichia coli 1827-70] gi|315136698|dbj|BAJ43857.1| putative assembly protein [Escherichia coli DH1] gi|323152455|gb|EFZ38743.1| protein asmA [Escherichia coli EPECa14] gi|323161873|gb|EFZ47749.1| protein asmA [Escherichia coli E128010] gi|323168814|gb|EFZ54494.1| protein asmA [Shigella sonnei 53G] gi|323172652|gb|EFZ58286.1| protein asmA [Escherichia coli LT-68] gi|323183846|gb|EFZ69237.1| protein asmA [Escherichia coli 1357] gi|323936869|gb|EGB33153.1| AsmA family protein [Escherichia coli E1520] gi|323948422|gb|EGB44405.1| AsmA family protein [Escherichia coli H120] gi|324019218|gb|EGB88437.1| AsmA family protein [Escherichia coli MS 117-3] gi|324119093|gb|EGC12982.1| AsmA family protein [Escherichia coli E1167] gi|331048341|gb|EGI20417.1| protein AsmA [Escherichia coli M718] gi|331063954|gb|EGI35865.1| protein AsmA [Escherichia coli TA271] gi|332101134|gb|EGJ04480.1| AsmA protein [Shigella sp. D9] Length = 617 Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|331677974|ref|ZP_08378649.1| protein AsmA [Escherichia coli H591] gi|331074434|gb|EGI45754.1| protein AsmA [Escherichia coli H591] Length = 617 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 124/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 +++ + +V+ E+ + D LNET E + Sbjct: 264 ----NNSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|218705599|ref|YP_002413118.1| putative assembly protein [Escherichia coli UMN026] gi|293405539|ref|ZP_06649531.1| asmA [Escherichia coli FVEC1412] gi|298381223|ref|ZP_06990822.1| AsmA protein [Escherichia coli FVEC1302] gi|218432696|emb|CAR13590.1| putative inner membrane protein involved in outer membrane protein assembly [Escherichia coli UMN026] gi|291427747|gb|EFF00774.1| asmA [Escherichia coli FVEC1412] gi|298278665|gb|EFI20179.1| AsmA protein [Escherichia coli FVEC1302] Length = 617 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQVNWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|209919529|ref|YP_002293613.1| putative assembly protein [Escherichia coli SE11] gi|218554632|ref|YP_002387545.1| putative assembly protein [Escherichia coli IAI1] gi|218695687|ref|YP_002403354.1| putative assembly protein [Escherichia coli 55989] gi|209912788|dbj|BAG77862.1| suppressor of ompF assembly mutants [Escherichia coli SE11] gi|218352419|emb|CAU98193.1| putative inner membrane protein involved in outer membrane protein assembly [Escherichia coli 55989] gi|218361400|emb|CAQ98987.1| putative inner membrane protein involved in outer membrane protein assembly [Escherichia coli IAI1] gi|320198756|gb|EFW73356.1| AsmA protein [Escherichia coli EC4100B] Length = 617 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|170681043|ref|YP_001743075.1| putative assembly protein [Escherichia coli SMS-3-5] gi|170518761|gb|ACB16939.1| AsmA protein [Escherichia coli SMS-3-5] gi|315299474|gb|EFU58725.1| AsmA family protein [Escherichia coli MS 16-3] Length = 617 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|316933217|ref|YP_004108199.1| AsmA family protein [Rhodopseudomonas palustris DX-1] gi|315600931|gb|ADU43466.1| AsmA family protein [Rhodopseudomonas palustris DX-1] Length = 1277 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 55/306 (17%), Positives = 117/306 (38%), Gaps = 17/306 (5%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81 P IDW FR FE +AT ++G ++ V G + +LP PS+ + + + D Sbjct: 21 VGPFLIDWNQFRGPFEAEATRVLGAQVRVAGPLDARLLPTPSLRLQRVTVGGANDAG-RV 79 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEK 141 L + L+ GE+R ++ I+ L+ L +G +W + + +++ Sbjct: 80 GAAKLDVEFSLGSLMRGELRADELSINGLSLDLGLDPQGRLDWPAAGL--SNLAALTVDR 137 Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201 +++ GRI + D S LSD+ + + ++ +G +R Sbjct: 138 LNLT-GRIALHDAASRSNLELSDI-----------AFSGELRAQAAALRGDGNFLLGGQR 185 Query: 202 SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261 F+++ A AI L+ + A I DL G + +++ +P + G +A + Sbjct: 186 YPFRLSTGRAADGAAIRLRAGINQGAGGIAADLDGLVRFDQGRPRFDGTALLAALAAVAG 245 Query: 262 NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321 E R++ + ++ ++ + + + L+ + Sbjct: 246 --ETPRTPWRIAAKIEADPVRAQLDEVEVSWGAEDRALKLAGSGEARFGAVPRLDAKLSA 303 Query: 322 AESMHD 327 + D Sbjct: 304 RQLDAD 309 >gi|320172671|gb|EFW47906.1| AsmA protein [Shigella dysenteriae CDC 74-1112] Length = 617 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|261822286|ref|YP_003260392.1| assembly protein [Pectobacterium wasabiae WPP163] gi|261606299|gb|ACX88785.1| AsmA family protein [Pectobacterium wasabiae WPP163] Length = 611 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 45/386 (11%), Positives = 115/386 (29%), Gaps = 49/386 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + + ++ DFR +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLAILLVVLVAGMAALVVLVNPNDFRAYMVKQVEERSGYRLQLDGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + E + + + PLLS ++ V + + + S+ Sbjct: 61 LSILSGGMSLSAPGSSAPIVSAENMRLDVQLWPLLSHKLAVKQVMLKGAIIRLTPESEAR 120 Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + + + ++KI V + I+ + +++ + D+NL + Sbjct: 121 QANNAPIAPVGSQAPSEERRWRLDIDKIKVAD-SLLILQRSNNEQINVRDINLAMEQNSD 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 N ++ A SL + L +P ++ Sbjct: 180 R-----------------------QINIELSSRINRDQRDIAFSLAADVDLLRFPEQVNA 216 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 + + G + + +++ + ++ L Sbjct: 217 TIT----------KLDYQLQGAGIPTTGIS---GTGSVQVSYQQQPEKITFNQLVLN--- 260 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-LNETDFFEEEEKKNKNDDLKKDDIQY 353 +++ V+ + + D L +E I Sbjct: 261 -TNNSQLSGAGSVTLGDIPHYELDLLSEKLDLDSLLGVAAVKENNAPTVAVKPSAPVISN 319 Query: 354 SVNKKEEKDNSHDKENQENFSGDKMI 379 + +D+ + + +I Sbjct: 320 EAEASKPEDSLQRFTARLSLQAASLI 345 >gi|24113448|ref|NP_707958.1| putative assembly protein [Shigella flexneri 2a str. 301] gi|30063513|ref|NP_837684.1| putative assembly protein [Shigella flexneri 2a str. 2457T] gi|24052476|gb|AAN43665.1| suppressor of ompF assembly mutants [Shigella flexneri 2a str. 301] gi|30041766|gb|AAP17493.1| suppressor of ompF assembly mutants [Shigella flexneri 2a str. 2457T] gi|281601518|gb|ADA74502.1| Suppressor of ompF assembly mutants [Shigella flexneri 2002017] gi|332756791|gb|EGJ87136.1| protein asmA [Shigella flexneri 2747-71] gi|333002422|gb|EGK21984.1| protein asmA [Shigella flexneri K-218] gi|333002570|gb|EGK22131.1| protein asmA [Shigella flexneri VA-6] gi|333017152|gb|EGK36473.1| protein asmA [Shigella flexneri K-304] Length = 617 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQSQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|256022244|ref|ZP_05436109.1| putative assembly protein [Escherichia sp. 4_1_40B] Length = 617 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRINRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQVNWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEQPEWQLRLQFPQLNLDNLIPLNETANGENGTAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|300821830|ref|ZP_07101975.1| AsmA family protein [Escherichia coli MS 119-7] gi|300525672|gb|EFK46741.1| AsmA family protein [Escherichia coli MS 119-7] Length = 617 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRINRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQVNWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEQPEWQLRLQFPQLNLDNLIPLNETANGENGTAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|260868774|ref|YP_003235176.1| putative assembly protein AsmA [Escherichia coli O111:H- str. 11128] gi|257765130|dbj|BAI36625.1| predicted assembly protein AsmA [Escherichia coli O111:H- str. 11128] gi|323177038|gb|EFZ62628.1| protein asmA [Escherichia coli 1180] Length = 617 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDITSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|194431564|ref|ZP_03063856.1| AsmA protein [Shigella dysenteriae 1012] gi|194420389|gb|EDX36466.1| AsmA protein [Shigella dysenteriae 1012] gi|332091788|gb|EGI96867.1| protein asmA [Shigella dysenteriae 155-74] Length = 617 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP + Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGMVDASDYPHDL 216 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 I + + G ++ + ++ S + ++ L + Sbjct: 217 S----------AAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|110642274|ref|YP_670004.1| putative assembly protein [Escherichia coli 536] gi|191170191|ref|ZP_03031745.1| AsmA protein [Escherichia coli F11] gi|300981677|ref|ZP_07175663.1| AsmA family protein [Escherichia coli MS 200-1] gi|110343866|gb|ABG70103.1| protein AsmA precursor [Escherichia coli 536] gi|190909707|gb|EDV69292.1| AsmA protein [Escherichia coli F11] gi|300307478|gb|EFJ61998.1| AsmA family protein [Escherichia coli MS 200-1] gi|324013887|gb|EGB83106.1| AsmA family protein [Escherichia coli MS 60-1] Length = 617 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 53/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ +SL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTLSLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQVQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANDENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|323977776|gb|EGB72862.1| AsmA family protein [Escherichia coli TW10509] Length = 617 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 50/387 (12%), Positives = 122/387 (31%), Gaps = 51/387 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 + + + +V+ E+ + D N E +N + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLD-NLIPLKETANGENGAAQQGQSQST 318 Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379 + + + + F+ D ++ Sbjct: 319 LPRPVISSRIDEPAYQGLKGFAADILL 345 >gi|82543440|ref|YP_407387.1| assembly protein [Shigella boydii Sb227] gi|81244851|gb|ABB65559.1| suppressor of ompF assembly mutants [Shigella boydii Sb227] gi|320183704|gb|EFW58542.1| AsmA protein [Shigella flexneri CDC 796-83] gi|332097205|gb|EGJ02188.1| protein asmA [Shigella boydii 3594-74] Length = 617 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 119/391 (30%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRNYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF------Y 115 S+ + + + + + + + LPLLS ++ V + + + Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEVV 120 Query: 116 LSSK---GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 S + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G + + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIH---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|238753412|ref|ZP_04614775.1| hypothetical protein yruck0001_19390 [Yersinia ruckeri ATCC 29473] gi|238708365|gb|EEQ00720.1| hypothetical protein yruck0001_19390 [Yersinia ruckeri ATCC 29473] Length = 617 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 50/382 (13%), Positives = 123/382 (32%), Gaps = 49/382 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R+L L L V++ G + L ++ DFR +Q +++++G ++ H+ P Sbjct: 1 MKRLLTTLAILLVVLIAGMSALVLLVNPNDFRAYMVKQVEKKYSYQLSLEGDMRWHVWPR 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + E + + + PLLS ++ V + + + S+ Sbjct: 61 LSIISGRMSLIAPGATTPVVSAENMRLDVKLWPLLSHQLAVKQVMLKGAVVRLTPDSEAQ 120 Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + S+ ++ + K+ V + I + +D + D+NL + Sbjct: 121 ALADAPVAPAGNTPSSERASWSLDIGKVQVVD-SLLIWQRANDDQINVRDINLLME---- 175 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 G + N ++ +SL + YP I Sbjct: 176 -------------------QGPQHQVSVSLSSRVNRDQRDLTLSLAADVDMQRYPQQIMA 216 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 I + + G + + + L+ +++ D + I + + + Sbjct: 217 N----------ISQFSYKLEGADVPVGGI---VGQGALTASYQKEDARISIDKINISA-- 261 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-LNETDFFEEEEKKNKNDDLKKDDIQY 353 + + S + D L + ++ + Sbjct: 262 --NDNVLTGSLQASLGDLPDYRVDLQSDNLNLDKLFGWQAKMGNTDSSSPPSSRQQVVAA 319 Query: 354 SVNKKEEKDNSHDKENQENFSG 375 V ++ D D ++ +F+G Sbjct: 320 PVIANQDVDVGRDLQSLRDFTG 341 >gi|110806033|ref|YP_689553.1| putative assembly protein [Shigella flexneri 5 str. 8401] gi|110615581|gb|ABF04248.1| suppressor of ompF assembly mutants [Shigella flexneri 5 str. 8401] Length = 617 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQSQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|332092441|gb|EGI97514.1| protein asmA [Shigella boydii 5216-82] Length = 617 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP + Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGMVDASDYPHDL 216 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 I + + G ++ + ++ S + ++ L + Sbjct: 217 S----------AAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|293415353|ref|ZP_06657996.1| asmA protein [Escherichia coli B185] gi|291433001|gb|EFF05980.1| asmA protein [Escherichia coli B185] Length = 617 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 53/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPL+S ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLVSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|157267361|ref|NP_288572.2| putative assembly protein [Escherichia coli O157:H7 str. EDL933] gi|169822937|gb|AAG57126.2|AE005432_7 suppressor of ompF assembly mutants [Escherichia coli O157:H7 str. EDL933] Length = 617 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 53/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESRKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D JNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPJNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|300917105|ref|ZP_07133795.1| AsmA family protein [Escherichia coli MS 115-1] gi|300415624|gb|EFJ98934.1| AsmA family protein [Escherichia coli MS 115-1] Length = 617 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 122/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMGKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 ---------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G + + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIH---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|91977829|ref|YP_570488.1| AsmA [Rhodopseudomonas palustris BisB5] gi|91684285|gb|ABE40587.1| AsmA [Rhodopseudomonas palustris BisB5] Length = 1308 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 58/306 (18%), Positives = 112/306 (36%), Gaps = 18/306 (5%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81 P IDW FR+ FE +AT G + V G + +LP P++ +D+ I D Sbjct: 21 VGPYVIDWNQFRDQFEAEATRRAGAPVRVAGELDARLLPTPTLRLRDVTIGGAND-PGRI 79 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEK 141 + L + L+ GE R + ++ L+ L SKG +W + + + +++ Sbjct: 80 RAAKLDVEFSLGALMRGEWRADVLTVNGFALDLGLDSKGRLDWPAS--GLSNLAALSIDR 137 Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201 +++ GRI + D S L D+ + + GS+ +G D+ R Sbjct: 138 LNLT-GRIALHDAASRSTIELGDI-----------AFAGDLRAQGGSLRGDGNFLLDSTR 185 Query: 202 SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261 F+++A L I + + DL G L ++++ P + G ++ Sbjct: 186 YPFRLSAGRATDGDGTRLHITIDQAGRGMSADLDGLLAFDDRSPRFDGTAVLSASAVATN 245 Query: 262 NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321 R+S K + + + + + + LL + Sbjct: 246 PARTP---WRISAKVKAGPALAALDQLEASWGAEDRALRLAGSGDLRFGASPLLTAKLSA 302 Query: 322 AESMHD 327 + D Sbjct: 303 RQLDGD 308 >gi|26248439|ref|NP_754479.1| putative assembly protein [Escherichia coli CFT073] gi|300978931|ref|ZP_07174444.1| AsmA family protein [Escherichia coli MS 45-1] gi|301048791|ref|ZP_07195789.1| AsmA family protein [Escherichia coli MS 185-1] gi|26108844|gb|AAN81047.1|AE016763_6 Protein asmA precursor [Escherichia coli CFT073] gi|300299376|gb|EFJ55761.1| AsmA family protein [Escherichia coli MS 185-1] gi|300409564|gb|EFJ93102.1| AsmA family protein [Escherichia coli MS 45-1] gi|315294414|gb|EFU53762.1| AsmA family protein [Escherichia coli MS 153-1] Length = 617 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 53/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ +SL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTLSLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQVQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|320193352|gb|EFW67990.1| AsmA protein [Escherichia coli WV_060327] Length = 617 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLMAAIEQINWQLQGADLPKQGIQ---GQGSFQVQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|331658144|ref|ZP_08359106.1| protein AsmA [Escherichia coli TA206] gi|222033830|emb|CAP76571.1| Protein asmA [Escherichia coli LF82] gi|312946687|gb|ADR27514.1| putative assembly protein [Escherichia coli O83:H1 str. NRG 857C] gi|331056392|gb|EGI28401.1| protein AsmA [Escherichia coli TA206] Length = 617 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 53/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ +SL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTLSLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQVQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|158426106|ref|YP_001527398.1| hypothetical protein AZC_4482 [Azorhizobium caulinodans ORS 571] gi|158332995|dbj|BAF90480.1| putative uncharacterized protein [Azorhizobium caulinodans ORS 571] Length = 1258 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 65/323 (20%), Positives = 121/323 (37%), Gaps = 22/323 (6%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64 +LIGL +V+ AF P +DWT FR FE QA+ ++G ++++GGI+ ILP P + Sbjct: 12 LLIGLASAVILVISAAFAAPFVVDWTMFRATFEAQASRVIGLPVSIRGGIEADILPAPHL 71 Query: 65 FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124 D+ + ED + + + L LL GE+ ++ + +P + L KG Sbjct: 72 VLHDVVVGG-EDRTSSASMRTLKADLSLGALLRGEVEAPNVTLVRPLFSLVLDPKGR--- 127 Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 + + + ++ G + ++D+ +D+ L+DLNL+ AR S Sbjct: 128 -LAAPAGGVAAGASVGQFIIEQGTLALVDRGADRTVQLTDLNLKGEAR-----------S 175 Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 + G +G ++R + + L++ P +DL G L Sbjct: 176 VSGPFRLDGDLKAGSERYQLRANLAKFGEEGG-KLRLIAEGRTQPFALDLDGTLRLVGDV 234 Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 P + G +++ + + S + +L Sbjct: 235 PRFEGKGTLSRKGEAGAAEAWRLAAA-----VRASPEAIVADTLELTMAEDTRPAQLTGS 289 Query: 305 TKVSQDEENLLNFSENGAESMHD 327 + S L+ N D Sbjct: 290 ARFSLGRAIGLDAVLNARNLDLD 312 >gi|331673593|ref|ZP_08374356.1| protein AsmA [Escherichia coli TA280] gi|331068866|gb|EGI40258.1| protein AsmA [Escherichia coli TA280] Length = 617 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 115/366 (31%), Gaps = 54/366 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQVNWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEQPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYS 354 S Sbjct: 320 PRPVIS 325 >gi|323968198|gb|EGB63607.1| AsmA family protein [Escherichia coli M863] gi|327253196|gb|EGE64850.1| protein asmA [Escherichia coli STEC_7v] Length = 617 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 50/387 (12%), Positives = 122/387 (31%), Gaps = 51/387 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 + + + +V+ E+ + D N E +N + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLD-NLIPLKETANGENGAAQQGQSQST 318 Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379 + + + + F+ D ++ Sbjct: 319 LPRPVISSRIDEPAYQGLQGFTADILL 345 >gi|331647716|ref|ZP_08348808.1| protein AsmA [Escherichia coli M605] gi|281179163|dbj|BAI55493.1| suppressor of ompF assembly mutants [Escherichia coli SE15] gi|330911901|gb|EGH40411.1| AsmA protein [Escherichia coli AA86] gi|331043440|gb|EGI15578.1| protein AsmA [Escherichia coli M605] Length = 617 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQVQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|307138720|ref|ZP_07498076.1| putative assembly protein [Escherichia coli H736] gi|331642680|ref|ZP_08343815.1| protein AsmA [Escherichia coli H736] gi|331039478|gb|EGI11698.1| protein AsmA [Escherichia coli H736] Length = 617 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQVNWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEQPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGLSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTTDILL 345 >gi|190575498|ref|YP_001973343.1| putative outer membrane protein assembly protein [Stenotrophomonas maltophilia K279a] gi|190013420|emb|CAQ47055.1| putative outer membrane protein assembly protein, AsmA family [Stenotrophomonas maltophilia K279a] Length = 657 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 41/365 (11%), Positives = 104/365 (28%), Gaps = 32/365 (8%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIE 84 DW F+ ER G+ + + G + + + ++ I + + Sbjct: 45 WDWNWFKGPVERAVQARTGRVLHI-GNLDVDLGRTSTIRADAITFANASWAKQPEMASAD 103 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS-KGVSNWFQRKSTMDMIHNVILEKIH 143 + + PLL G +++ ++ + +P + + KG + + L+++ Sbjct: 104 RVEIDVRVWPLLRGSVQLPEVRLTRPDVLLETAPRKGEPGNWDFLGDSAGGTSPQLKRLR 163 Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203 + GR++ ID + ++ +G G++ Sbjct: 164 IDDGRLQFIDALGRTDIRV-----------GVRSGQPKQADASPPLLVQGKGHWQGNPFT 212 Query: 204 FKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261 + P + + +I L G L + ++ F+++G L Sbjct: 213 LRGGTESPLELTDSDHPFRIHLDGRVGATHAVASGTLTNPFQLRVFDLQFALSGQDLSDL 272 Query: 262 NLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN 316 L L G K R + + + + + Sbjct: 273 YPLLGIAIPPSPPYALDGRLKRDHNVWRYDSFTGKVGDSD----LAGNLQFEVGRDRP-R 327 Query: 317 FSENGAESMHDLNETDFF-----EEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371 + D ++ F + + N + K + + + + D ++ Sbjct: 328 LTATLESRRLDFDDLAGFVGAPPKTGGGETANAEQKAQAARIAASSRVLPDTPYNLGKLR 387 Query: 372 NFSGD 376 D Sbjct: 388 AMDAD 392 >gi|168750423|ref|ZP_02775445.1| AsmA protein [Escherichia coli O157:H7 str. EC4113] gi|168757966|ref|ZP_02782973.1| AsmA protein [Escherichia coli O157:H7 str. EC4401] gi|168769821|ref|ZP_02794828.1| AsmA protein [Escherichia coli O157:H7 str. EC4486] gi|168775483|ref|ZP_02800490.1| AsmA protein [Escherichia coli O157:H7 str. EC4196] gi|168782352|ref|ZP_02807359.1| AsmA protein [Escherichia coli O157:H7 str. EC4076] gi|168799050|ref|ZP_02824057.1| AsmA protein [Escherichia coli O157:H7 str. EC508] gi|208808009|ref|ZP_03250346.1| AsmA protein [Escherichia coli O157:H7 str. EC4206] gi|208817215|ref|ZP_03258307.1| AsmA protein [Escherichia coli O157:H7 str. EC4045] gi|208819146|ref|ZP_03259466.1| AsmA protein [Escherichia coli O157:H7 str. EC4042] gi|209395947|ref|YP_002271309.1| AsmA protein [Escherichia coli O157:H7 str. EC4115] gi|254793850|ref|YP_003078687.1| putative assembly protein [Escherichia coli O157:H7 str. TW14359] gi|187768968|gb|EDU32812.1| AsmA protein [Escherichia coli O157:H7 str. EC4196] gi|188015404|gb|EDU53526.1| AsmA protein [Escherichia coli O157:H7 str. EC4113] gi|189000197|gb|EDU69183.1| AsmA protein [Escherichia coli O157:H7 str. EC4076] gi|189355118|gb|EDU73537.1| AsmA protein [Escherichia coli O157:H7 str. EC4401] gi|189361201|gb|EDU79620.1| AsmA protein [Escherichia coli O157:H7 str. EC4486] gi|189378507|gb|EDU96923.1| AsmA protein [Escherichia coli O157:H7 str. EC508] gi|208727810|gb|EDZ77411.1| AsmA protein [Escherichia coli O157:H7 str. EC4206] gi|208730834|gb|EDZ79524.1| AsmA protein [Escherichia coli O157:H7 str. EC4045] gi|208739269|gb|EDZ86951.1| AsmA protein [Escherichia coli O157:H7 str. EC4042] gi|209157347|gb|ACI34780.1| AsmA protein [Escherichia coli O157:H7 str. EC4115] gi|209748016|gb|ACI72315.1| suppressor of ompF assembly mutants [Escherichia coli] gi|209748018|gb|ACI72316.1| suppressor of ompF assembly mutants [Escherichia coli] gi|254593250|gb|ACT72611.1| predicted assembly protein [Escherichia coli O157:H7 str. TW14359] gi|326347054|gb|EGD70787.1| AsmA protein [Escherichia coli O157:H7 str. 1125] Length = 617 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESRKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|15832125|ref|NP_310898.1| assembly protein [Escherichia coli O157:H7 str. Sakai] gi|168761810|ref|ZP_02786817.1| AsmA protein [Escherichia coli O157:H7 str. EC4501] gi|168788737|ref|ZP_02813744.1| AsmA protein [Escherichia coli O157:H7 str. EC869] gi|217329631|ref|ZP_03445710.1| AsmA protein [Escherichia coli O157:H7 str. TW14588] gi|261225087|ref|ZP_05939368.1| putative assembly protein [Escherichia coli O157:H7 str. FRIK2000] gi|261257567|ref|ZP_05950100.1| putative assembly protein [Escherichia coli O157:H7 str. FRIK966] gi|13362340|dbj|BAB36294.1| suppressor of ompF assembly mutants [Escherichia coli O157:H7 str. Sakai] gi|189367820|gb|EDU86236.1| AsmA protein [Escherichia coli O157:H7 str. EC4501] gi|189371540|gb|EDU89956.1| AsmA protein [Escherichia coli O157:H7 str. EC869] gi|209748014|gb|ACI72314.1| suppressor of ompF assembly mutants [Escherichia coli] gi|217317399|gb|EEC25828.1| AsmA protein [Escherichia coli O157:H7 str. TW14588] gi|320191767|gb|EFW66415.1| AsmA protein [Escherichia coli O157:H7 str. EC1212] gi|320641362|gb|EFX10817.1| putative assembly protein [Escherichia coli O157:H7 str. G5101] gi|320668092|gb|EFX34971.1| putative assembly protein [Escherichia coli O157:H7 str. LSU-61] gi|326338423|gb|EGD62251.1| AsmA protein [Escherichia coli O157:H7 str. 1044] Length = 617 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESRKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|306814812|ref|ZP_07448974.1| putative assembly protein [Escherichia coli NC101] gi|305852206|gb|EFM52658.1| putative assembly protein [Escherichia coli NC101] gi|324006457|gb|EGB75676.1| AsmA family protein [Escherichia coli MS 57-2] Length = 617 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLMAAIEQINWQLQGADLPKQGIQ---GQGSFQVQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|56478298|ref|YP_159887.1| hypothetical protein ebA5035 [Aromatoleum aromaticum EbN1] gi|56314341|emb|CAI08986.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 662 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 47/372 (12%), Positives = 105/372 (28%), Gaps = 26/372 (6%) Query: 2 LR--RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI- 58 ++ RVL G+G ++ L D R RQ T G+++ + G + I Sbjct: 1 MKSGRVLKGIGVTVLGLIALIVLAALLFDPNWLRGPIMRQTTEKTGRELVINGDLSIDWG 60 Query: 59 LPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 P + + E E +S+ L + + ++ +D+ Sbjct: 61 WPVTRLGAAGVTFANPEWAEEPQMFTAENISVGVSLPQLFRRVVMLPEITLDRVDAFLEQ 120 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 G NW + D V + ++ + GRI+ D + S + Sbjct: 121 HPDGRKNWLLDREQKDEGARVGIGRLALHDGRIRYADPAQKTRIDATLSTTGGSGERGSD 180 Query: 177 ISP--------LSIDSIKGSVIAEGTGNFDNKRSAFKITANF--PAKNKAISLKIQLFPL 226 + + + E G + + + T +++ + + Sbjct: 181 SAADPKPEADVPPATEAESGIRFEAKGQYKGRPMNARGTGGPVLALRDEETPYPLDVQAQ 240 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDG 281 + GN+ K + + G L + R +G+ + Sbjct: 241 FGDTAVKADGNITSLLKLSAINLDVDLRGASIADLYRLIGIALPETPPYRTAGHLIRNGT 300 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEE-NLLNFSENGAESMH-DLNETDFFEEEEK 339 R + + +V+ E L+ + DL +E Sbjct: 301 VWRYENFSGAIGKSD----VAGTLQVATGGERPSLHGDLSFKLLDFADLGPLVGAKEAPV 356 Query: 340 KNKNDDLKKDDI 351 ++++ Sbjct: 357 ESEDAAPDAPAP 368 >gi|323187792|gb|EFZ73090.1| protein asmA [Escherichia coli RN587/1] Length = 617 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 49/387 (12%), Positives = 122/387 (31%), Gaps = 51/387 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQVNWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 + + + +++ E+ + D N E +N + Sbjct: 264 ----NDSTLSGQAQITLTEKPEWQLRLQFPQLNLD-NLIPLKETANGENGAAQQGQSQST 318 Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379 + + + + F+ D ++ Sbjct: 319 LPRPVISSRIDEPAYQGLQGFTADILL 345 >gi|300947788|ref|ZP_07161945.1| AsmA family protein [Escherichia coli MS 116-1] gi|300452634|gb|EFK16254.1| AsmA family protein [Escherichia coli MS 116-1] Length = 617 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLMAAIEQINWQLQGADLPKQGIQ---GQGSFQVQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGLSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|300902294|ref|ZP_07120290.1| AsmA family protein [Escherichia coli MS 84-1] gi|301304500|ref|ZP_07210611.1| AsmA family protein [Escherichia coli MS 124-1] gi|301647991|ref|ZP_07247764.1| AsmA family protein [Escherichia coli MS 146-1] gi|300405603|gb|EFJ89141.1| AsmA family protein [Escherichia coli MS 84-1] gi|300840226|gb|EFK67986.1| AsmA family protein [Escherichia coli MS 124-1] gi|301073892|gb|EFK88698.1| AsmA family protein [Escherichia coli MS 146-1] gi|315255426|gb|EFU35394.1| AsmA family protein [Escherichia coli MS 85-1] gi|323940866|gb|EGB37054.1| AsmA family protein [Escherichia coli E482] Length = 617 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLMAAIEQINWQLQGADLPKQGIQ---GQGSFQVQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGLSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|333003407|gb|EGK22951.1| protein asmA [Shigella flexneri K-272] gi|333017237|gb|EGK36557.1| protein asmA [Shigella flexneri K-227] Length = 617 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 122/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 ---------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQSQWQESHKRLSFNQISL-- 261 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 262 --IANDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|320646732|gb|EFX15619.1| putative assembly protein [Escherichia coli O157:H- str. 493-89] gi|320652009|gb|EFX20362.1| putative assembly protein [Escherichia coli O157:H- str. H 2687] Length = 617 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESRKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|157161555|ref|YP_001458873.1| putative assembly protein [Escherichia coli HS] gi|157067235|gb|ABV06490.1| AsmA protein [Escherichia coli HS] Length = 617 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLMAAIEQINWQLQGADLPKQGIQ---GQGSFQVQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLISLNETANGENGAAQQGLSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|284922059|emb|CBG35137.1| putative outer membrane assembly protein [Escherichia coli 042] Length = 617 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVTGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQVNWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEQPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|300692202|ref|YP_003753197.1| outer membrane biogenesis protein, AsmA family [Ralstonia solanacearum PSI07] gi|299079262|emb|CBJ51934.1| putative outer membrane biogenesis protein, AsmA family [Ralstonia solanacearum PSI07] Length = 750 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 58/429 (13%), Positives = 117/429 (27%), Gaps = 60/429 (13%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58 RV +GL V++ A L DW+ + + +G+ A+ G + + Sbjct: 6 RVTLGLVITPVVIVAAAIVFVLTFDWSRAKPYLNDHVSQAIGRPFAINGDLVLTWKTPEG 65 Query: 59 -------LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P + DI I + ++ L+ E LPLL+ I + + +D Sbjct: 66 ESGWRAYVPWPRLIASDITIGNPGWTRQPHVATVQRLTFVLEALPLLAHRIVIPSVTLDT 125 Query: 110 PHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVKGGRIKIIDQE-----SDQVYF 161 P + + +NW + + L +I G +++ D+ + + Sbjct: 126 PVVALERDPQNRNNWTFNFGAPDSKPSDWKLELREIAFSKGSVQVDDEVKRVHLAATIDT 185 Query: 162 LSDLNLQISARFLNIISP-----------------------LSIDSIKGSVIAEGTGNFD 198 + + L +A I + + G ++ Sbjct: 186 VDNQTLYTAANGTAIRGSEQPPVVPTASGAAASGATAKAPLAADPQQPYGITWTVKGTYN 245 Query: 199 NKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGD 256 N A + + +Q IDL G L ++G Sbjct: 246 NAAIHGSGKAGGVLRLQDAHRPYPLQADVTVGKTRIDLAGTLTNPASLTALDLRLHLSGA 305 Query: 257 FSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 L RL G + + R ++ + + Sbjct: 306 SMAHLYPLTGVVLPDTPPFDTRGRLIGELRRQGSSWRYEKFTGRVGSSD----LGGTLTF 361 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + E +G H L D + ++D+ K Sbjct: 362 AMRPEPGQRPQLSGELVSHQLLFADLAPIIGADSNASKQRRDEPVRQPADKVLPVEPFRT 421 Query: 368 ENQENFSGD 376 + D Sbjct: 422 DRWNAIDAD 430 >gi|301021263|ref|ZP_07185294.1| AsmA family protein [Escherichia coli MS 69-1] gi|300398189|gb|EFJ81727.1| AsmA family protein [Escherichia coli MS 69-1] Length = 617 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 49/387 (12%), Positives = 122/387 (31%), Gaps = 51/387 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + + + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKMADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 + + + +V+ E+ + D N E +N + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLD-NLIPLKETANGENGAAQQGQSQST 318 Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379 + + + + F+ D ++ Sbjct: 319 LPRPVISSRIDEPAYQGLQGFTADILL 345 >gi|238785444|ref|ZP_04629429.1| hypothetical protein yberc0001_16760 [Yersinia bercovieri ATCC 43970] gi|238713649|gb|EEQ05676.1| hypothetical protein yberc0001_16760 [Yersinia bercovieri ATCC 43970] Length = 612 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 43/387 (11%), Positives = 113/387 (29%), Gaps = 53/387 (13%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64 +L L L V++ G + L ++ DFR +Q G + ++G ++ H+ P S+ Sbjct: 1 MLTTLIILLVVIVAGMSALVLLVNPNDFRAYMVKQVEKKSGYHLQLEGDLRWHVWPQLSI 60 Query: 65 FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124 + + E + + + PLLS ++ V + + + S+ Sbjct: 61 IVGRTALTAPGATAPIVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLTPDSEAQQQP 120 Query: 125 FQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 + + K+ + + ++DQ + DLNL++ Sbjct: 121 GAPVAPSGSAPLNEHRAWKLDINKVQIADSLLIWQRTDNDQ-VNVRDLNLELKQDDQR-- 177 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 N ++ S+ YP Sbjct: 178 ---------------------QVHITLSSRVNRNQRDVTFSMVADADMRHYPQQFSAN-- 214 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297 I + + G + + + L +++ + +++ + + Sbjct: 215 --------ISQFAYKLEGADIPVGGVS---GEGTLQASYQSDIQQLLLNQLSFSA----N 259 Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHD-----LNETDFFEEEEKKNKNDDLKKDDIQ 352 + K + + + D +++ ++ K IQ Sbjct: 260 NNQLTGSAKATLGDIPDYTINLAADNLNLDTIFGWESKSAAVSKDAGKQSTVTAPVIAIQ 319 Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379 + ++ + D Q + + + ++ Sbjct: 320 ADEDVGQDLQSLRDFNAQISLTANNLV 346 >gi|260769033|ref|ZP_05877967.1| AsmA protein [Vibrio furnissii CIP 102972] gi|260617063|gb|EEX42248.1| AsmA protein [Vibrio furnissii CIP 102972] Length = 704 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 57/440 (12%), Positives = 128/440 (29%), Gaps = 71/440 (16%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ + + L VVL + + ++ F+ Q G + ++G I P Sbjct: 1 MKKLFLFVAALLIVVLGAIAALVILVNPNQFKPLLVEQTKKQTGLDLVIEGDIGWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + K++ + + +PL ++++ ++ +D ++ Sbjct: 61 IGFELGKTELKNPSGFSSPNLFKVDSVGIDVSVMPLFDKQLQIGNIRLDGAEVHLETLKD 120 Query: 120 GVSNWFQR--------------------------KSTMDMIHNVILEKIHVKGGRIKIID 153 G SN ++ ++ L + + ++I D Sbjct: 121 GRSNLDSLTKAQASTQSNDAKETAPAAETPTANDSASAAQDWSINLAGVSINNALLEIQD 180 Query: 154 QESDQVYFLSDLNLQISAR----FLNIISPLSIDSIKGSVIAEGTGNFDNKR-------- 201 +++ L D+ LQ+S + + + + A G + Sbjct: 181 RKAGTQTKLYDVQLQVSEFAADAWTRVDFAAKGSNNQQQFGASGNAEIKLSKDFKQYALR 240 Query: 202 ---------------SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 + K+T +KA +L A + +D G+ Q I Sbjct: 241 NITLDANFSDPSTRIDSAKLTLATFEFDKANALTFSAKGTASQMKLDANGSASVTVDQAI 300 Query: 247 YSGVFSVAG--DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 L S K + + +S L + N+ D K Sbjct: 301 SHVSVEKLDLTANLDGAALPQSPMKVTMQSSVAFDMTKNALS-VVLDKLTANA-LQFDGK 358 Query: 305 TKVSQDEENLLNFSENGAESMHD----LNETDFFEEE--------EKKNKNDDLKKDDIQ 352 V + + F+ + + D LN++ E K + + + D+ Sbjct: 359 ANVVLGDIPKVRFNLHSPDIDLDEFLGLNQSTATAESKPAAGGSAGKSSSDKAEVEPDLS 418 Query: 353 YSVNKKEEKDNSHDKENQEN 372 D + DK N Sbjct: 419 ALKTLDVAGDIAIDKFKASN 438 >gi|191168859|ref|ZP_03030632.1| AsmA protein [Escherichia coli B7A] gi|190901098|gb|EDV60874.1| AsmA protein [Escherichia coli B7A] Length = 617 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFFGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|82777425|ref|YP_403774.1| putative assembly protein [Shigella dysenteriae Sd197] gi|81241573|gb|ABB62283.1| suppressor of ompF assembly mutants [Shigella dysenteriae Sd197] Length = 617 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 53/391 (13%), Positives = 122/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGWVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQELHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|323698506|ref|ZP_08110418.1| AsmA family protein [Desulfovibrio sp. ND132] gi|323458438|gb|EGB14303.1| AsmA family protein [Desulfovibrio desulfuricans ND132] Length = 719 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 62/404 (15%), Positives = 118/404 (29%), Gaps = 66/404 (16%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ LIGLG + ++ A D D++ + G+ + G I + P Sbjct: 5 LKFGLIGLGVCLVLFVISAVIFAAVFDPNDYKGRISQAVLKETGRTLTFDGDISLTFFPG 64 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V + + E + + + + LPLL G++R + +D P LN K Sbjct: 65 LGVTLGGLSLSNAEGFGPAPMASVRSARVTVRLLPLLMGKVRFNRLELDGPVLNLGRDEK 124 Query: 120 GVSNWFQRKSTMDM--------------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 G +NW ++ + + V+ G + D++SD + L L Sbjct: 125 GGANWDDLVGREPDKADKADQDEDAGSGTFDLDVAGVAVRNGSLSWDDRKSDTRFLLRGL 184 Query: 166 NLQISARFLNIISPLSIDSI--------KGSVIAEGTGNFD---------NKRSAFKIT- 207 ++ A + P+ + KG++ EG + D + + K T Sbjct: 185 DVTTGAISKGGLFPVKLSVNFDCSKPDAKGALTLEGKSSIDLASRQYGHMDVHATVKATG 244 Query: 208 ANFPAKNKAISLKIQLFPLA---------------YPIIIDLFGNLF-WNEKQPIYSGVF 251 A P L Q L Y + G + + + Sbjct: 245 AAIPGGVLDGKLNFQFLALDFNKETAQVTGLECTAYGATLLADGTIRGLTDGLKAATASL 304 Query: 252 SVAGDFSKLLNLELSAKKSRL-----------SGNFKISDGNVRISRYKLQSILPNSSTD 300 ++ + + L A + G + + +L Sbjct: 305 TLQPADLRTVFAALGAPAPNTADPKALTEVGGTAKVNFKTGRLALDDVELSV----DGCR 360 Query: 301 EDNKTKVSQDEE-NLLNFSENGAESMHDLNETDFFEEEEKKNKN 343 K V + + + E D E E + Sbjct: 361 IVGKGTVERGRAWPRITAQVDAGEVDLDRYLPPKHGENEGAAQE 404 >gi|227887120|ref|ZP_04004925.1| assembly protein [Escherichia coli 83972] gi|227835470|gb|EEJ45936.1| assembly protein [Escherichia coli 83972] gi|307554138|gb|ADN46913.1| suppressor of OmpF assembly mutants [Escherichia coli ABU 83972] Length = 617 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 49/387 (12%), Positives = 121/387 (31%), Gaps = 51/387 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + + + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKMADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 + + + +V+ E+ + D N E +N + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLD-NLIPLKETANGENGAAQQGQSQST 318 Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379 + + + F+ D ++ Sbjct: 319 LPRPVISSRIDEPAYQGLHGFTADILL 345 >gi|91211353|ref|YP_541339.1| putative assembly protein [Escherichia coli UTI89] gi|117624261|ref|YP_853174.1| putative assembly protein [Escherichia coli APEC O1] gi|218558945|ref|YP_002391858.1| assembly protein [Escherichia coli S88] gi|237704521|ref|ZP_04535002.1| AsmA protein [Escherichia sp. 3_2_53FAA] gi|91072927|gb|ABE07808.1| AsmA suppressor of OmpF assembly mutants [Escherichia coli UTI89] gi|115513385|gb|ABJ01460.1| AsmA suppressor of OmpF assembly mutants [Escherichia coli APEC O1] gi|218365714|emb|CAR03450.1| putative inner membrane protein involved in outer membrane protein assembly [Escherichia coli S88] gi|226900887|gb|EEH87146.1| AsmA protein [Escherichia sp. 3_2_53FAA] gi|294491130|gb|ADE89886.1| AsmA protein [Escherichia coli IHE3034] gi|307626389|gb|ADN70693.1| putative assembly protein [Escherichia coli UM146] gi|315285660|gb|EFU45102.1| AsmA family protein [Escherichia coli MS 110-3] gi|323951818|gb|EGB47692.1| AsmA family protein [Escherichia coli H252] gi|323956100|gb|EGB51852.1| AsmA family protein [Escherichia coli H263] Length = 617 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 49/387 (12%), Positives = 121/387 (31%), Gaps = 51/387 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + + + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKMADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 + + + +V+ E+ + D N E +N + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLD-NLIPLKETANGENGAAQQGQSQST 318 Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379 + + + F+ D ++ Sbjct: 319 LPRPVISSRIDEPAYQGLHGFTADILL 345 >gi|307312371|ref|ZP_07592005.1| AsmA family protein [Escherichia coli W] gi|306907542|gb|EFN38045.1| AsmA family protein [Escherichia coli W] gi|315061339|gb|ADT75666.1| putative assembly protein [Escherichia coli W] gi|323378081|gb|ADX50349.1| AsmA family protein [Escherichia coli KO11] Length = 617 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESYKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEQPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|300936630|ref|ZP_07151534.1| AsmA family protein [Escherichia coli MS 21-1] gi|300458211|gb|EFK21704.1| AsmA family protein [Escherichia coli MS 21-1] Length = 617 Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 49/387 (12%), Positives = 121/387 (31%), Gaps = 51/387 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + + + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKMADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 + + + +V+ E+ + D N E +N + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLD-NLIPLKETANGENGAAQQGQSQST 318 Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379 + + + F+ D ++ Sbjct: 319 LPRPVISSRIDEPAYQGLHGFTADILL 345 >gi|271499797|ref|YP_003332822.1| AsmA family protein [Dickeya dadantii Ech586] gi|270343352|gb|ACZ76117.1| AsmA family protein [Dickeya dadantii Ech586] Length = 604 Score = 150 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 41/327 (12%), Positives = 105/327 (32%), Gaps = 48/327 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+ L L V+ G + + I+ DFR RQ + G ++ + G ++ H+ P Sbjct: 1 MRRLFTTLVILLVVLAAGMTALVVLINPNDFRAYMVRQVEMRTGYRLNLDGELRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ ++ + + E + + + PLLS ++ V + + + S+ Sbjct: 61 LSILSGNLSVSAPGAATPVINAENMRLDVKLWPLLSHKLEVKQVMLKGAVIRLTPDSEAR 120 Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 D + + ++ V + + + + D+NL + + Sbjct: 121 QASPAPIAPAGPSAPEADTPWHFDINQVEVADSVLVF-QRGNAPALNVRDINLTMRSDAS 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 + + N ++ + SL L YP + Sbjct: 180 R-----------------------QVQVSLSSRFNRDQRDLSFSLDAVLDMQNYPQQVAA 216 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 I S + + G + + K + G+++ + ++++ L + Sbjct: 217 D----------ISSVSYQLQGAGLP---ADGISGKGTIRGSYQRQPEKLTVNQFALSA-- 261 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENG 321 +++ + + + Sbjct: 262 --NNSQLNGALSATFGTVPEYVLTLQS 286 >gi|218699342|ref|YP_002406971.1| putative assembly protein [Escherichia coli IAI39] gi|218369328|emb|CAR17086.1| putative inner membrane protein involved in outer membrane protein assembly [Escherichia coli IAI39] Length = 617 Score = 150 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 49/387 (12%), Positives = 121/387 (31%), Gaps = 51/387 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + + + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKMADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 + + + +V+ E+ + D N E +N + Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLD-NLIPLKETANGENGAAQQGQSQST 318 Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379 + + + F+ D ++ Sbjct: 319 LPRPVISLRIDEPAYQGLHGFTADILL 345 >gi|218549481|ref|YP_002383272.1| assembly protein [Escherichia fergusonii ATCC 35469] gi|218357022|emb|CAQ89653.1| putative inner membrane protein involved in outer membrane protein assembly [Escherichia fergusonii ATCC 35469] gi|324114263|gb|EGC08235.1| AsmA family protein [Escherichia fergusonii B253] Length = 617 Score = 150 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 48/387 (12%), Positives = 123/387 (31%), Gaps = 51/387 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRTILTAQGASQPLVRADNMRLDVALWPLLSHQLSVKQVMLKGAVIQLTPETEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + D+ LQ+ Sbjct: 121 RSEDAPVAPKDNTLPDNAEDRGWSFDIASLRVSDSVLVF-QHEDDEQVTVRDIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ++SLK + YP + Sbjct: 180 SQHRGS-----------------------FEFSGRVNRDQRDLSLSLKGTVDASDYPHDL 216 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + + G ++ + ++ + + + L + Sbjct: 217 TADIQ----------QIDWQLQGADLPKQGIQGHG---QFRAQWQEAQKRLSFEQINLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 + ++ + +V+ E+ A+ D N + +N ++ Sbjct: 264 ----NDSNLTGQAQVALLEKPEWLLRLQFAQLNLD-NLLPMNDVMTTQNGVAQQGQNQPT 318 Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379 + + + + F+ D ++ Sbjct: 319 LPRPVISSRIDEPAYQGLKGFAADILL 345 >gi|315180772|gb|ADT87686.1| asmA protein [Vibrio furnissii NCTC 11218] Length = 704 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 56/440 (12%), Positives = 127/440 (28%), Gaps = 71/440 (16%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ + + L VVL + + ++ F+ Q G + ++G I P Sbjct: 1 MKKLFLFVAALLIVVLGAIAALVVLVNPNQFKPLLVEQTKKQTGLDLVIEGDIGWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + K++ + + +PL ++++ ++ +D ++ Sbjct: 61 IGFELGKTELKNPSGFSSPNLFKVDSVGIDVSVMPLFDKQLQIGNIRLDGAEVHLETLRD 120 Query: 120 GVSNWFQR--------------------------KSTMDMIHNVILEKIHVKGGRIKIID 153 G SN ++ ++ L + + ++I D Sbjct: 121 GRSNLDSLTKAQTSTPSNDAKETAPAAETPTANDSASAAQDWSINLAGVSINNALLEIQD 180 Query: 154 QESDQVYFLSDLNLQISAR----FLNIISPLSIDSIKGSVIAEGTGNFDNKR-------- 201 +++ L D+ LQ+S + + + + A G + Sbjct: 181 RKAGTQTKLYDVQLQVSEFAADAWTRVDFAAKGSNNQQQFGASGNAEIKLSKDFKQYALR 240 Query: 202 ---------------SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 + K+ +KA +L A + +D G+ Q I Sbjct: 241 NITLDANFSDPSTRIDSAKLALATFEFDKANALTFSAKGTASQMKLDANGSASVTVDQAI 300 Query: 247 YSGVFSVAG--DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 L S K + + +S L + N+ D K Sbjct: 301 SHVSVEKLDLTANLDGAALPQSPMKVTMQSSVAFDMTKNALS-VVLDKLTANA-LQFDGK 358 Query: 305 TKVSQDEENLLNFSENGAESMHD----LNETDFFEEE--------EKKNKNDDLKKDDIQ 352 V + + F+ + + D LN++ E K + + + D+ Sbjct: 359 ANVVLGDIPKVRFNLHSPDIDLDEFLGLNQSTATAESKPAAGGSAGKSSSDKAEVEPDLS 418 Query: 353 YSVNKKEEKDNSHDKENQEN 372 D + DK N Sbjct: 419 ALKTLDVAGDIAIDKFKASN 438 >gi|239817230|ref|YP_002946140.1| AsmA family protein [Variovorax paradoxus S110] gi|239803807|gb|ACS20874.1| AsmA family protein [Variovorax paradoxus S110] Length = 669 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 56/382 (14%), Positives = 115/382 (30%), Gaps = 43/382 (11%) Query: 21 FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKD 68 V L DW R ++ + G+ A++G + + +P+P + +D Sbjct: 25 IAVLLSFDWNRARPWINQRVSEATGRPFAIRGDLALQWSSPEAETGWRRWVPWPRLSAQD 84 Query: 69 IRIDQKEDGSF---ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW- 124 I + + G ++I L+ LPLL+ IR+ + + P L+ +++G +NW Sbjct: 85 ITLGNADWGKTGPHLAEIRQLTFSLNPLPLLNHTIRIPTLELAGPVLSLERTAEGKNNWT 144 Query: 125 -FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + L+++ + G +K+ D + + ++ + S + Sbjct: 145 LAAGGGAEPSSWKLDLQRLVLSQGTVKLADATARLDLKVD----------IDSLPAESAE 194 Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243 GT + + K A + +Q ID+ G L + Sbjct: 195 GYGIGWKLGGTFRQTPVQGSGKAGAVLSLQQDTKPYPLQAGVQVGATRIDIAGTLTKPDA 254 Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFKISDGNVRISRYKLQSIL 294 ++G L L G + G +K + Sbjct: 255 LAALDLRLKLSGASMAHLYPITGITLPNTPPFSTEGHLVGKLDKAGGRWLYENFKGRVGA 314 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354 + + + VSQ LL + + D + K+ Sbjct: 315 SDIAGTLE---YVSQQPRPLLRGQVQSNQLRLE----DLAPLIGADSNASKAKRGAPAVQ 367 Query: 355 VNKKEEKDNSHDKENQENFSGD 376 K D + + D Sbjct: 368 PAGKVLPVEKFDTASWGSIDAD 389 >gi|325497885|gb|EGC95744.1| putative assembly protein [Escherichia fergusonii ECD227] Length = 617 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 124/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESYKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + + Sbjct: 264 ----NDSTLSGQAQVTLTEQPEWQLRLQFPQLNLDNLIPLNETANGENDAAQQGQSQSTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|229523174|ref|ZP_04412581.1| AsmA protein [Vibrio cholerae TM 11079-80] gi|229339537|gb|EEO04552.1| AsmA protein [Vibrio cholerae TM 11079-80] Length = 749 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 58/432 (13%), Positives = 128/432 (29%), Gaps = 56/432 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ I L L +++ + L ++ F+ QA G + ++G I P Sbjct: 47 MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 106 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL ++++ ++ +D + Sbjct: 107 IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 166 Query: 120 GVSNWF-----------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQES 156 G SN S ++ L + V ++I D+++ Sbjct: 167 GRSNLDALTQAQSKPASTPATTEPAPASQPSSSEPTAAWSIELGGVSVSNAVLEITDKKA 226 Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197 L D+ L + + D + A+G Sbjct: 227 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 286 Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 N+ + K+ + +KA +L + A + ++ G+ Q I Sbjct: 287 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAAEMKLNAQGSASLMVNQAISKV 346 Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + L S K L +S L + N+ D K V Sbjct: 347 GLDALKLQAELEGTALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 404 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + + + F+ + + D +E + + + N E + Sbjct: 405 TLADIPKVRFNLHSPDIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSA 464 Query: 368 ENQENFSGDKMI 379 N + +G+ I Sbjct: 465 LNALDVAGEISI 476 >gi|302381772|ref|YP_003817595.1| AsmA family protein [Brevundimonas subvibrioides ATCC 15264] gi|302192400|gb|ADK99971.1| AsmA family protein [Brevundimonas subvibrioides ATCC 15264] Length = 686 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 109/361 (30%), Gaps = 30/361 (8%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65 + V++ L DW R R A+ +++A++G + + + + PSV Sbjct: 51 KIAASVVLVLIAAIVIFLLLFDWNWLRGPIGRWASAKYDREVALQGDLDVRLFSWTPSVI 110 Query: 66 FKDIRIDQKEDGSFE--SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 D++ + + +E + + L G++ + + I +P + + G + Sbjct: 111 VNDLKFGGPSWATEADTANVERIEAQFRLRKLFVGQVEMPLLSITRPRVVLIATEDGRQS 170 Query: 124 WFQRKSTMDMIHNVI---LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 W D + ++ + GR+ + +Q +L + A + Sbjct: 171 WDLEPDKPDDGEGAKLPLINRLVITDGRLSVDEQRR---------DLTLEAAVTAQEAAS 221 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLF 239 D G + EG G+ + KI + + + G + Sbjct: 222 DADGQSG-FVLEGEGSINGSPLTLKIEGGPFINIRRNRPYGFKATLAGAGSRLVADGAIT 280 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSIL 294 ++ S+ G L L RL+G D + + + Sbjct: 281 RPFDLGQFTSTLSLQGQNLNDLYLLTGVTLPNTPAYRLAGALTRDDNIWTFNDFSGRVGA 340 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354 + + +V ++ + + D D + + + D S Sbjct: 341 SD----LEGDVRVQGGGRLKVDATLSSQRLDID----DLTTILGGRAQTNAAGTDTTTIS 392 Query: 355 V 355 Sbjct: 393 T 393 >gi|170769724|ref|ZP_02904177.1| AsmA protein [Escherichia albertii TW07627] gi|170121338|gb|EDS90269.1| AsmA protein [Escherichia albertii TW07627] Length = 617 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 51/391 (13%), Positives = 121/391 (30%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF------Y 115 S+ + + + + + + +PLLS ++ V + + + Sbjct: 61 LSILSGRMSLTAPGASQPLVRADNMRLDVALMPLLSHQLNVQQVMLKGAVIQLTPQTKEV 120 Query: 116 LSSK---GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + +++LQ+ Sbjct: 121 RDENAPIAPRDNTLPDLSEDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIHLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ++SLK + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLSLSLKGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + + + V G ++ + + + + ++ L + Sbjct: 214 -------HDLTAVVEQITWQVQGADLPKQGIQ---GQGSFQAQWLEASKRLSFNQINLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET + + Sbjct: 264 ----NDSTFGGQAQVTLTEQPEWQLKLQFPQLNLDNLIALNETANNNNGAVQQGQNQSML 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + FS D ++ Sbjct: 320 PRPVISSRIHEPPY-----QGLKGFSADILL 345 >gi|194366827|ref|YP_002029437.1| AsmA family protein [Stenotrophomonas maltophilia R551-3] gi|194349631|gb|ACF52754.1| AsmA family protein [Stenotrophomonas maltophilia R551-3] Length = 657 Score = 149 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 42/366 (11%), Positives = 102/366 (27%), Gaps = 34/366 (9%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIE 84 DW F+ ER G+ + + G + + + +V I + + Sbjct: 45 WDWNWFKGPVERAVQARTGRVLHI-GHLDVDLGRTSTVRADAITFANASWSKQPEMATAD 103 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL--SSKGVSNWFQRKSTMDMIHNVILEKI 142 + + PLL G +++ ++ + +P + NW L+++ Sbjct: 104 RIEIDVRVWPLLRGSVQLPEVRLTRPDVLLETAPRKDEPGNWDFLGDRSGGTS-PQLKRL 162 Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202 + GR++ +D + ++ +G G + Sbjct: 163 RIDDGRLQFLDALGRTDIRVD-----------VRSGQPKQADAAPPLLVQGKGRWRGNPF 211 Query: 203 AFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL 260 + P + + +I L A G L + ++ F+++G Sbjct: 212 TLRGGTESPLQLTDSDHPFRIHLDGRAGATHAVATGTLTNPFQLRMFDLQFALSGQDLAD 271 Query: 261 LNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315 L L L+G K R ++ + + + Sbjct: 272 LYPLLGIAIPPSPPYALNGRLKRDHNVWRYEQFTGKVGDSD----LGGNLQFEVGGARP- 326 Query: 316 NFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQ 370 + D ++ F + + N K + + + + + D ++ Sbjct: 327 RLTATLESKRLDFDDLAGFVGAPPKTGGGETANAQQKAEAARVAASARVLPDTPYNLGKL 386 Query: 371 ENFSGD 376 D Sbjct: 387 RAMDAD 392 >gi|114706927|ref|ZP_01439826.1| hypothetical protein FP2506_02709 [Fulvimarina pelagi HTCC2506] gi|114537477|gb|EAU40602.1| hypothetical protein FP2506_02709 [Fulvimarina pelagi HTCC2506] Length = 1255 Score = 149 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 78/346 (22%), Positives = 136/346 (39%), Gaps = 48/346 (13%) Query: 15 VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74 + L A PLFIDW+ +R DFER+A+ I+G+++ V+G +LPFPSV F+D+ + Sbjct: 2 LALFAALMAPLFIDWSVYRSDFEREASRILGREVRVEGEATARLLPFPSVTFQDLSVAGD 61 Query: 75 EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134 ++ + +E M AE P LSGEIR+F M ++ P L G K ++ Sbjct: 62 DEDAPFLTVEEFRMNAELAPYLSGEIRIFAMALNNPVLRI-----GKDGVALPKPSIPRS 116 Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 ++LE + + G I D+ SD+ +R I S DS+ G G Sbjct: 117 AEIVLEDVVISNGTILFPDE--------SDVVDAGVSRLTGIEGNFSADSLSGPFEGSGG 168 Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF--- 251 + F+I A + + L++ Y IDL G + ++ + G Sbjct: 169 FRLAGREVGFEIDAGKSDETGSAPLRMSFLSERYSAAIDLDGRIVTGDEIAHFDGRLAYR 228 Query: 252 ------------------SVAGDFSKLLNLE-----------LSAKKSRLSGNFKISDGN 282 ++ GD ++ +++ +A R SG+ I+ Sbjct: 229 QPLATQISDTEETESVFATLQGDNNEEQSIDGSRSSSGQSGRGNAPSVRASGSISITADR 288 Query: 283 VRISRYKLQSILPNSSTDEDNKTKV-SQDEENLLNFSENGAESMHD 327 +++ ++ ++ N S G D Sbjct: 289 AVSDALRVEIGET--PYVLTGSGEIFVRNGALGFNVSLEGESFDVD 332 >gi|86749150|ref|YP_485646.1| AsmA [Rhodopseudomonas palustris HaA2] gi|86572178|gb|ABD06735.1| AsmA [Rhodopseudomonas palustris HaA2] Length = 1273 Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 63/334 (18%), Positives = 121/334 (36%), Gaps = 27/334 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ L+GL V L+ A P +DW FR+ FE +AT + G + V G + +LP Sbjct: 1 MQTTLLGLAIALIVALLAALVGPFVVDWNQFRDQFETEATRLAGAPVRVAGDLDARLLPT 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P++ +D+ I D + L + L+ GE R ++ ++ L+ L + G Sbjct: 61 PTLRLRDVTIGGAND-PGRIRAAKLDVEFSLGALMRGEWRADELSVNGFALDLGLDADGR 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +W + + + ++++++ GRI + D S LSD+ Sbjct: 120 LDWPAS--GLSDLAALSIDRLNLT-GRIALHDAASRSTLELSDI-----------AFAGD 165 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--------NKAISLKIQLFPLAYPIIID 233 + + S+ +G R F+++A A N L + + + D Sbjct: 166 LRAQGTSLRGDGNFLMHGTRYPFRLSAGRAAASQGTSQATNDGTRLHLTVDQAGRGVTAD 225 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 L G L + + P + G ++ + S R+S K + + + Sbjct: 226 LDGVLAFAGRSPRFEGTAMLS----ATAAPDGSRTPWRISAKVKADPALAALDQLDVSWG 281 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + V LL + D Sbjct: 282 AEERALKLAGSGDVRFGAAPLLTARLAARQLDGD 315 >gi|207728225|ref|YP_002256619.1| protein involved in outer membrane biogenesis [Ralstonia solanacearum MolK2] gi|206591470|emb|CAQ57082.1| protein involved in outer membrane biogenesis [Ralstonia solanacearum MolK2] Length = 749 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 60/429 (13%), Positives = 119/429 (27%), Gaps = 60/429 (13%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58 RV++GL V++ A L DW+ + + +G+ A+ G + + Sbjct: 6 RVILGLVITPVVIMAAAVVFVLTFDWSRAKPYLNDHVSQAIGRPFAINGDLSLTWKKPEG 65 Query: 59 -------LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P + DI I + + ++ L+ E LPLL+ I + + +D Sbjct: 66 ESGWRAYVPWPRLIANDITIGNPDWTRRPHAATVQRLTFVLEALPLLAHRIVIPSVTLDT 125 Query: 110 PHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVKGGRIKIIDQE-----SDQVYF 161 P + ++ +NW + + + L +I G +++ D + V Sbjct: 126 PVVALERDNQNRNNWTFHLGTQDSKPSDWKLELREIAFSKGSVQLDDDIKRIHLAATVDT 185 Query: 162 LSDLNLQISARFLNIISPLSIDSIKG-------------------------SVIAEGTGN 196 + + L +A I + + +GT N Sbjct: 186 VDNQTLYTAANGTAISGSEQPPVVPTASGAAASGAAAKAPVAADPQQPYGLAWTVKGTYN 245 Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGD 256 K ++ +Q IDL G L ++G Sbjct: 246 NAAIHGGGKAGGVLRLQDAHRPYPLQADVTIGKTRIDLAGTLTNPASLTALDLRLHLSGA 305 Query: 257 FSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 L RL G + + R ++ + + Sbjct: 306 SMAHLYPMTGVVLPDTPPFDTRGRLIGELRRQGSSWRYEKFTGRVGGSD----LGGTLTF 361 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + E G H L D + ++D+ K Sbjct: 362 AMRPEPGQRPQLTGELVSHQLLFADLAPIIGADSNASKQRRDEPVRQPADKVLPVEPFRT 421 Query: 368 ENQENFSGD 376 + D Sbjct: 422 DRWNAIDAD 430 >gi|156933341|ref|YP_001437257.1| putative assembly protein [Cronobacter sakazakii ATCC BAA-894] gi|156531595|gb|ABU76421.1| hypothetical protein ESA_01154 [Cronobacter sakazakii ATCC BAA-894] Length = 613 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 44/387 (11%), Positives = 107/387 (27%), Gaps = 55/387 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RRVL L L V G + + ++ DFR Q G ++ + G ++ H+ P Sbjct: 1 MRRVLTTLMILLVVFFAGLSALVMLVNPNDFRSYMISQVERRSGYQLRLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + PLLS ++ V + + + S+ Sbjct: 61 LSILSGRMSLTAPGASQPLVSADNMRLDVALFPLLSHQLSVRQVMLKGAVVQLTPQSEAR 120 Query: 122 SNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 + + ++ V + + D+ + ++NLQ+ Sbjct: 121 HEPGAPVGPKNSAPPVEDSHGWSFDIARLKVADSVLVF-QHKDDEQITVRNINLQMEQNE 179 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 + + + + ++ +SL L YP + Sbjct: 180 HH-----------------------DAQLELSGKVSRDQRDLTLSLSAALNAADYPQTLS 216 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 + + + G + L + D + S L++ Sbjct: 217 AT----------VSQLSWELRGADLP---RDGIVGNGTLQARWLEGDKRLEFSALNLKA- 262 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDDLKKDDIQ 352 + + + V+ + + + + L D + + Sbjct: 263 ---NDSQLAGQGSVTLGDTPGWDLDLHFSALDLEKLLAPDAATTTAVAQQGQQNARPRPV 319 Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379 + +E F+ I Sbjct: 320 IANEVEEAPYT-----GLRGFNASATI 341 >gi|296103724|ref|YP_003613870.1| AsmA family protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058183|gb|ADF62921.1| AsmA family protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 616 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 50/387 (12%), Positives = 121/387 (31%), Gaps = 51/387 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RRVL L L V++ G + L ++ DFR RQ G ++ + G ++ H+ P Sbjct: 1 MRRVLTTLMILLVVLVAGLSALVLLVNPNDFRAYMVRQVEARSGYQLKLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + +PL S +++V + + + ++ V Sbjct: 61 LSILSGRMSLTAPGAAQPLVSADNMRLDVALVPLFSHQLQVNQVMLKGAVIQLTQQTEAV 120 Query: 122 SNWFQ---------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 N D + + K+ V + E D+ + ++NL++ Sbjct: 121 RNADAPVAPRENTLPDEPSDTGWSFDIGKLKVADSVLVF-QHEDDEQVTVRNINLKMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 ++ S F N ++ +SL + YP + Sbjct: 180 EHHLAS-----------------------LEFSGRVNRDQRDLTLSLNASVNASDYPHQL 216 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + + G + A + + ++ + ++ LQ+ Sbjct: 217 TADIQ----------QLNWQLTGADLPAQGI---AGQGTMQAVWREELKQLEMNNLNLQA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 + + + V + + + + + N N L ++ + Sbjct: 264 ----NDSSLKGQASVILEAKPKWVLNLQFDKLNLE-NLLPPPPASATDNDPAQLGQNQGK 318 Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379 + + D F+ D ++ Sbjct: 319 QTRPVISSNLDQPDYNGLRGFTADILL 345 >gi|320177894|gb|EFW52878.1| AsmA protein [Shigella boydii ATCC 9905] Length = 617 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 51/391 (13%), Positives = 121/391 (30%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF------Y 115 S+ + + + + + + +PLLS ++ V + + + Sbjct: 61 LSILSGRMSLTAPGASQPLVRADNMRLDVALMPLLSHQLNVQQVMLKGAVIQLTPQTKEV 120 Query: 116 LSSK---GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + +++LQ+ Sbjct: 121 RDENAPIAPRDNTLSDLSEDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIHLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ++SLK + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLSLSLKGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + + + V G ++ + + + + ++ L + Sbjct: 214 -------HDLTAVVEQITWQVQGADLPKQGIQ---GQGSFQAQWLEASKRLSFNQINLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET + + Sbjct: 264 ----NDSTFGGQAQVTLTEQPEWQLKLQFPQLNLDNLIALNETANNNNGAVQQGQNQSML 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + FS D ++ Sbjct: 320 PRPVISSRIHEPPY-----QGLKGFSADILL 345 >gi|292488726|ref|YP_003531613.1| protein AsmA [Erwinia amylovora CFBP1430] gi|292899882|ref|YP_003539251.1| exported protein [Erwinia amylovora ATCC 49946] gi|291199730|emb|CBJ46850.1| putative exported protein [Erwinia amylovora ATCC 49946] gi|291554160|emb|CBA21363.1| Protein asmA precursor [Erwinia amylovora CFBP1430] Length = 615 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 46/390 (11%), Positives = 110/390 (28%), Gaps = 54/390 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R + L L VV+ G + + ++ DFR RQ G +A+ G ++ H+ P Sbjct: 1 MKRFITTLAILLVVVVAGMTALVVLVNPNDFRAYMVRQVEQRSGYHLALNGELRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + LPL S ++ V + + + SK + Sbjct: 61 LSILSGPVTVTAPGAQQPVVSAANMRLDVDLLPLFSHQLSVKQVMLKGAVIRLTPDSKSL 120 Query: 122 SNWFQ-----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + + + + G + Q + + + DLNL + Sbjct: 121 PPADAPIGPAGSRTFSPSDDVARGWKFDISHLRIADGLLVW-QQSNGEQINVRDLNLALD 179 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + + + L +L YP Sbjct: 180 QTQPR-----------------------QVHIEISSRVHRDQRELQVDLSSELDITDYPR 216 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 ++ I + + G + K+++ ++ G + L Sbjct: 217 RVN----------AIIQQLDYQLKGADLPPAGI---LGKAQMKASWDSLTGRFSLDEINL 263 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKK 348 + + + + L + + D L + E++ + Sbjct: 264 NA----NDSQLRGTLSGTLGPHPELLANLHADSIDLDSLLGLSGAIEQDASAAEPRSGHA 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKM 378 I + + Q + D++ Sbjct: 320 PVIASVPVTDNVHSVLNALDGQLTLAVDRL 349 >gi|83593544|ref|YP_427296.1| AsmA [Rhodospirillum rubrum ATCC 11170] gi|83576458|gb|ABC23009.1| AsmA [Rhodospirillum rubrum ATCC 11170] Length = 1077 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 128/378 (33%), Gaps = 50/378 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R +L G L ++++ VP F+DW +R+ + I G+ + V+G + +H+LP Sbjct: 1 MRTLLFGTVVLIALMVGTVLAVPSFVDWNLYRDRLSAEIQRITGRALVVEGDLSLHLLPT 60 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 P++ + + + GS ++++ + ++ + LPLL GE+ V + I +P + + Sbjct: 61 PALAAQGVSLANAPGGSDPVMARVDSVQVKVDLLPLLHGEVVVRSVEIIRPVIVLERLAD 120 Query: 120 GVSNWF-----------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 G NW V + + G ++ D +++V Sbjct: 121 GRGNWEMRAGQGGGDEVDGRLPGAPPVESADPLEVAFNHVEIVDGVVRYRDGGTERVIDN 180 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 D+ L D + G +G + + +A + I+ Sbjct: 181 LDVTLV-------------ADRLNGPFSLQGRATALGLPVSLQAMIGAIDAGRATQVGIK 227 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK-------------- 268 L P + +L G + P G +A D L A Sbjct: 228 LGLENQPSVFELTGLVSGLSTGPTLRGSMGLAVDDPAAALDRLGAAMGRDLGLSAGPMKL 287 Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328 R++ ++S + +Q + + ++ + + + Sbjct: 288 PLRVNSRIELSSAAAKFDDMVVQL----AGNEVKGGASAVFGAVPRIDAAFVASRIDLEA 343 Query: 329 NETDFFEEEEKKNKNDDL 346 +T + ++ + Sbjct: 344 WKTAWSDQPGGSPAALAV 361 >gi|312172878|emb|CBX81134.1| Protein asmA precursor [Erwinia amylovora ATCC BAA-2158] Length = 615 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 46/390 (11%), Positives = 110/390 (28%), Gaps = 54/390 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R + L L VV+ G + + ++ DFR RQ G +A+ G ++ H+ P Sbjct: 1 MKRFITTLAILLVVVVAGMTALVVLVNPNDFRAYMVRQVEQRSGYHLALNGELRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + LPL S ++ V + + + SK + Sbjct: 61 LSILSGPVTVTAPGAQQPVVSAANMRLDVDLLPLFSHQLSVKQVMLKGAVIRLTPDSKSL 120 Query: 122 SNWFQ-----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + + + + G + Q + + + DLNL + Sbjct: 121 PPADAPIGPAGSRTFSPSDDVARGWKFDISHLRIADGLLVW-QQSNGEQINVRDLNLALD 179 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + + + L +L YP Sbjct: 180 QTQPR-----------------------QVHIEISSRVHRDQRELQVDLSSELDITDYPR 216 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 ++ I + + G + K+++ ++ G + L Sbjct: 217 RVN----------AIIQQLDYQLKGADLPPAGI---LGKAQMKASWDSLTGRFSLDEINL 263 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKK 348 + + + + L + + D L + E++ + Sbjct: 264 NA----NDSQLRGTLSGTLGPHPELLANLHADSIDLDSLLGLSGAIEQDASAAEPRSGHA 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKM 378 I + + Q + D++ Sbjct: 320 PVIASVPVTDNVHSVLNALDGQLTLAVDRL 349 >gi|154253731|ref|YP_001414555.1| AsmA family protein [Parvibaculum lavamentivorans DS-1] gi|154157681|gb|ABS64898.1| AsmA family protein [Parvibaculum lavamentivorans DS-1] Length = 656 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 56/363 (15%), Positives = 116/363 (31%), Gaps = 31/363 (8%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70 +F+V+ V A + +F DW FR E + + G+++ + G + + P D+ Sbjct: 10 AVFAVLAVIAVVLFIFWDWNWFRPMVEARVSAAAGREVRI-GHFDVDLSFTPRAVLDDVT 68 Query: 71 IDQKEDG---SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127 I+ IE LS+ P L G I + ++ + +P N +S+GV NW Sbjct: 69 IENPSGFGEEEPLGSIERLSVSLRAGPALRGRIVIPEIRLVKPVGNLRSNSEGVRNWDFG 128 Query: 128 KSTM-DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186 S+ + + ++ ++ G ++ D E + + + Sbjct: 129 TSSSGEGGAMPEIGELIIEEGSVRFADPELQADFT--------------TLIHTEEADGE 174 Query: 187 GSVIAEGTGNFDNKRSAFKITANFP--AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 ++A G ++ + + + L I L G L + Sbjct: 175 AMLVATTEGTYNGAPVEARFRGGALLTLRETERPYPVHLQAKNGDTHISLEGTLVNPLEF 234 Query: 245 PIYSGVFSVAGDFSKLLNLEL-----SAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 + G L + S RL G ++G +R + + + + Sbjct: 235 AGAQLALELEGKSLDHLEPIILIPLVSTPPYRLEGRLDYAEGRIRFNDFSGRVGQSD--- 291 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359 V EE + + L + F + + Q + + + Sbjct: 292 -LSGDFAVDPGEERP-QITADLRSKRVLLADLGGFIGAAPGEVSQQPDMSEEQQAEHARS 349 Query: 360 EKD 362 E Sbjct: 350 EAS 352 >gi|83749006|ref|ZP_00946014.1| probable transmembrane [Ralstonia solanacearum UW551] gi|83724344|gb|EAP71514.1| probable transmembrane [Ralstonia solanacearum UW551] Length = 749 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 60/434 (13%), Positives = 133/434 (30%), Gaps = 58/434 (13%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58 RV++GL V++ A L DW+ + + +G+ A+ G + + Sbjct: 6 RVILGLVITPVVIMAAAVVFVLTFDWSRAKPYLNDHVSQAIGRPFAINGDLSLTWKKPEG 65 Query: 59 -------LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P + DI I + + ++ L+ E LPLL+ I + + +D Sbjct: 66 ESGWRAYVPWPRLIANDITIGNPDWTRRPHAATVQRLTFVLEALPLLAHRIVIPSVTLDT 125 Query: 110 PHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVKGGRIKIIDQE-----SDQVYF 161 P + ++ +NW + + + L +I G +++ D + V Sbjct: 126 PVVALERDNQNRNNWTFHLGTQDSKPSDWKLELREIAFSKGSVQLDDDIKRIHLAATVDT 185 Query: 162 LSDLNLQISARFLNIISPLSIDSIKG-------------------------SVIAEGTGN 196 + + L +A I + + +GT N Sbjct: 186 VDNQTLYTAANGTAIGGSEQPPMVPTASGAAASGAAAKAPVAADPQQPYGLAWTVKGTYN 245 Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGD 256 K ++ +Q IDL G L ++G Sbjct: 246 NAAIHGGGKAGGVLRLQDAHRPYPLQADVTIGKTRIDLAGTLTNPASLTALDLRLHLSGA 305 Query: 257 FSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 L RL G + + R ++ + + S + Sbjct: 306 SMAHLYPLTGVVLPDTPPFDTRGRLIGELRRQGSSWRYEKFTGRVGGSDLSGTLTFAMRP 365 Query: 308 SQDEENLLNFSE-NGAESMHDLNE-TDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSH 365 + + L + DL K+ +++ +++ + + D + Sbjct: 366 TPGQRPQLTGELVSRQLLFADLAPIIGADSNASKQRRDEPVRQPADKVLPVEPFRTDRWN 425 Query: 366 DKENQENFSGDKMI 379 + F+G++++ Sbjct: 426 AIDADVKFTGERIV 439 >gi|163855041|ref|YP_001629339.1| hypothetical protein Bpet0736 [Bordetella petrii DSM 12804] gi|163258769|emb|CAP41068.1| conserved exported protein [Bordetella petrii] Length = 704 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 51/387 (13%), Positives = 103/387 (26%), Gaps = 48/387 (12%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 ++VLIGLG ++L V DW + + + +G+ AV G + + Sbjct: 5 KKVLIGLGGAIVLLLAALVLVIALFDWNQLKPTINERVSAALGRPFAVNGDLTVQWRRPV 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P+P + D+ I + + ++ LPLLS + + + + Sbjct: 65 DEPGWRGWVPWPHISMDDVSIGNPDWAEEPAMATLQRAEFSLSPLPLLSHHVVIRQIQLT 124 Query: 109 QPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 +P + G +NW + + +++I G+++ D+ Sbjct: 125 RPAASLLRLKDGRANWVFTLPDTGEPSPWVMDIDEIGFDQGQVQFRDETLRADIEAQIDP 184 Query: 167 LQISARFLNIISPLSIDSIKGS--------------VIAEGTGNFDNKRSAFKITAN--F 210 L F I + + G + Sbjct: 185 LGKPVPFAAIAGQAPASQADEAPPQQAQAAAAPEYVFGWKVKGRYKGLPLRGDGKIGGML 244 Query: 211 PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270 ++ + +Q I L G L ++G L + Sbjct: 245 AVRDASRPFPLQADVSVGDTRIALAGTLTDPANLGALDLRLELSGATMSDLYPLIGVTLP 304 Query: 271 ---------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDE-ENLLNFSE 319 RLS + G V + + + + E L + Sbjct: 305 DTPRYSTDGRLSARLREPGGAVFHYRDFNGKVGASD----LHGDLTFTAGEPRPKLAGNL 360 Query: 320 NGAESMH-DLNETDFFEEEEKKNKNDD 345 N DL + Sbjct: 361 NSRLLRMRDLGPLVGVPPAGQAKSASK 387 >gi|207744040|ref|YP_002260432.1| protein involved in outer membrane biogenesis [Ralstonia solanacearum IPO1609] gi|206595442|emb|CAQ62369.1| protein involved in outer membrane biogenesis [Ralstonia solanacearum IPO1609] Length = 712 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 60/434 (13%), Positives = 133/434 (30%), Gaps = 58/434 (13%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58 RV++GL V++ A L DW+ + + +G+ A+ G + + Sbjct: 6 RVILGLVITPVVIMAAAVVFVLTFDWSRAKPYLNDHVSQAIGRPFAINGDLSLTWKKPEG 65 Query: 59 -------LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P + DI I + + ++ L+ E LPLL+ I + + +D Sbjct: 66 ESGWRAYVPWPRLIANDITIGNPDWTRRPHAATVQRLTFVLEALPLLAHRIVIPSVTLDT 125 Query: 110 PHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVKGGRIKIIDQE-----SDQVYF 161 P + ++ +NW + + + L +I G +++ D + V Sbjct: 126 PVVALERDNQNRNNWTFHLGTQDSKPSDWKLELREIAFSKGSVQLDDDIKRIHLAATVDT 185 Query: 162 LSDLNLQISARFLNIISPLSIDSIKG-------------------------SVIAEGTGN 196 + + L +A I + + +GT N Sbjct: 186 VDNQTLYTAANGTAIGGSEQPPMVPTASGAAASGAAAKAPVAADPQQPYGLAWTVKGTYN 245 Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGD 256 K ++ +Q IDL G L ++G Sbjct: 246 NAAIHGGGKAGGVLRLQDAHRPYPLQADVTIGKTRIDLAGTLTNPASLTALDLRLHLSGA 305 Query: 257 FSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 L RL G + + R ++ + + S + Sbjct: 306 SMAHLYPLTGVVLPDTPPFDTRGRLIGELRRQGSSWRYEKFTGRVGGSDLSGTLTFAMRP 365 Query: 308 SQDEENLLNFSE-NGAESMHDLNE-TDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSH 365 + + L + DL K+ +++ +++ + + D + Sbjct: 366 TPGQRPQLTGELVSRQLLFADLAPIIGADSNASKQRRDEPVRQPADKVLPVEPFRTDRWN 425 Query: 366 DKENQENFSGDKMI 379 + F+G++++ Sbjct: 426 AIDADVKFTGERIV 439 >gi|39936564|ref|NP_948840.1| hypothetical protein RPA3502 [Rhodopseudomonas palustris CGA009] gi|39650420|emb|CAE28943.1| unknown protein [Rhodopseudomonas palustris CGA009] Length = 1271 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 56/306 (18%), Positives = 122/306 (39%), Gaps = 17/306 (5%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81 P IDW FR FE +AT ++G ++ V G + +LP PS+ + + + D Sbjct: 21 VGPYLIDWNQFRTPFEAEATRLLGAQVRVAGPLDARLLPTPSLRLQRVTVGGANDAG-RV 79 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEK 141 L + L+ GE+R ++ I+ L+ L +G +W + + + +++ Sbjct: 80 AAAKLDVEFSLGSLMRGELRADELSINGLSLDLGLDPQGRLDWPAA--GLSNLAALTVDR 137 Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201 +++ GRI + D S LSD+ + + ++ +G +R Sbjct: 138 LNLT-GRIALHDAASRSNLELSDI-----------AFSGELRAQAAALRGDGNLLLGGQR 185 Query: 202 SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261 F+++ + A + AI L+ + A I DL G + + + +P + G S+A + Sbjct: 186 YPFRLSTSRAADSDAIRLRAGINQGAGGIAADLDGLVRFEQSRPRFDGTASLAALAAATG 245 Query: 262 NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321 + + RL+ + ++ + ++ + + + L+ + Sbjct: 246 EMPRT--PWRLAAKVEADPALAKLDQVEVSWGADDRALKLTGSGEARFGAAPRLDAKLSA 303 Query: 322 AESMHD 327 + D Sbjct: 304 RQLDAD 309 >gi|253701956|ref|YP_003023145.1| AsmA family protein [Geobacter sp. M21] gi|251776806|gb|ACT19387.1| AsmA family protein [Geobacter sp. M21] Length = 1061 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 54/369 (14%), Positives = 120/369 (32%), Gaps = 31/369 (8%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK-GGIKIHILPFP 62 +L L + +V+++ A +P +D ++E+ Q + + + + G + + P Sbjct: 9 WLLPVLATILTVIVLAATLLPRLLDLDTYKEEILAQVKGALKRDLQYQTGAFSLRL--TP 66 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + F + + +K+ S + L++R LPLL +I + +++++P L +G Sbjct: 67 AFTFTGVTVKEKDGSSDFITADRLTVRIAILPLLRKKIVLSRLHLERPVLKIVRDRQGTF 126 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIID---QESDQVYFLSDLNLQISARFLNIISP 179 N + + + +K G I+ D + V LSD +L +S Sbjct: 127 NVGDLLTPSTGREAPGIRGLELKKGHIRFTDFAFSDKPVVTELSDADLFLSRLVRGKSCN 186 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 + + GS + A P ++ K+ PL + Sbjct: 187 FKLAAALGSPKGPVPVSLSGSAKI--PEAGAPFSGMEVNGKVGTGPLDAG---HFWPYYS 241 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 +G ++ G +++ + + Sbjct: 242 KWVPFKSLAGELALDAS---------------FKGRLNAFKSKA---EFRITRLNLDYPQ 283 Query: 300 DEDNKTKVSQ-DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358 ++ L + N + H + D F+ + DL D++ + N Sbjct: 284 VFHSRLTPRLFKGSCALTLTANQLDIDHVKVDLDGFKVNGGV-RLSDLHSGDLRITANAS 342 Query: 359 EEKDNSHDK 367 N D Sbjct: 343 SNSFNLRDF 351 Score = 39.1 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 25/237 (10%), Positives = 70/237 (29%), Gaps = 16/237 (6%) Query: 140 EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP-LSIDSIKGSVIAEGTGNFD 198 ++ D + V + L+ ++ L+ ++ A +D Sbjct: 513 GDANLTATTYAFRDIVAKPVSRPNALSFAMNFDKEQFRITALNYQLPPAALSATAVSRYD 572 Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY-SGVFSVAGDF 257 F I +N + + + + L + + + ++ SG +++ Sbjct: 573 G-PVNFDIRSNQFQSGEVGYMVPMVRDYRPAGPVQLQLHAAGPDMERLFWSGNAALSNVS 631 Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317 K + ++GN +I+ + ++ L+ K V+ + Sbjct: 632 VKAGDKVRPVS--GVTGNVRINGESFESTQLSLRVGGS----SISGKGTVTGLDHPSFLI 685 Query: 318 SENGAESMHDLNETDFFEEEEK-----KNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369 S + DL++ + +KD++Q + + + Sbjct: 686 SFSSPS--LDLSDLGLVPAKSPVRVDRVQGTLAYQKDNLQIAALSGTLGKSHLSLKG 740 >gi|56412979|ref|YP_150054.1| assembly protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361908|ref|YP_002141545.1| assembly protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127236|gb|AAV76742.1| putative outer membrane assembly protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093385|emb|CAR58836.1| putative outer membrane assembly protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 618 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 44/335 (13%), Positives = 105/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V G + E+D + D+ L + Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADGVLLF-QHENDDQVTVRDIRLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G +E + +L ++ + + + L + Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + +V+ E+ ++ D Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLQSSKLNLD 294 >gi|121728175|ref|ZP_01681210.1| asmA protein [Vibrio cholerae V52] gi|147674400|ref|YP_001216507.1| asmA protein [Vibrio cholerae O395] gi|121629572|gb|EAX61995.1| asmA protein [Vibrio cholerae V52] gi|146316283|gb|ABQ20822.1| asmA protein [Vibrio cholerae O395] gi|227012855|gb|ACP09065.1| asmA protein [Vibrio cholerae O395] Length = 703 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 57/432 (13%), Positives = 126/432 (29%), Gaps = 56/432 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ I L L +++ + L ++ F+ QA G + ++G I P Sbjct: 1 MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL ++++ ++ +D + Sbjct: 61 IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120 Query: 120 GVSNWFQRKS-----------------------TMDMIHNVILEKIHVKGGRIKIIDQES 156 G SN ++ L + V ++I D+++ Sbjct: 121 GRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKA 180 Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197 L D+ L + + D + A+G Sbjct: 181 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRDIK 240 Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 N+ + K+ + +KA +L + A + ++ G+ Q + Sbjct: 241 LDASFSDPSNQIDSVKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAMSKV 300 Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + L S K L +S L + N+ D K V Sbjct: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 358 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + + + F+ + E D +E + + N E + Sbjct: 359 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSASAPVTNAPAEVEPDLSA 418 Query: 368 ENQENFSGDKMI 379 N + +G+ I Sbjct: 419 LNALDVAGEISI 430 >gi|146312321|ref|YP_001177395.1| putative assembly protein [Enterobacter sp. 638] gi|145319197|gb|ABP61344.1| AsmA family protein [Enterobacter sp. 638] Length = 615 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 47/384 (12%), Positives = 118/384 (30%), Gaps = 52/384 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RRVL L L V++ G + L ++ DFR RQ G ++ + G ++ H+ P Sbjct: 1 MRRVLTTLMILLVVLVAGLSALVLLVNPNDFRSYMVRQVEARSGYELKLDGSLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + +PLLS +++V + + + ++ V Sbjct: 61 LSILSGRMSLTAPGASAPLVSADNMRLDVALIPLLSHQLQVEQVMLKGAVIQLTPQTEAV 120 Query: 122 SNWFQR---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 D + + + V + E ++ L ++NL++ Sbjct: 121 RKGDAPVAPRENSLPDVPDDAGWSFDIGSLRVVDSVLVF-QHEDEEQITLRNINLKMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 ++ + F N ++ +S+ + YP + Sbjct: 180 QHHVAT-----------------------VDFSGRINRNQRDLTLSMNANVNASDYPHQL 216 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + ++G + + L G ++ + ++ LQ+ Sbjct: 217 TADIT----------QLNWQLSGVDLPAQGIT---GQGSLQGIWREEQKQLELNNLNLQA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 + + + V E+ + + + +K ++ Sbjct: 264 ----NDSTLKGRASVVLSEQPKWVVDLQFDKLNLE--NLLVSQTVVTDDKTVQQGQNQPT 317 Query: 353 YSVNKKEEKDNSHDKENQENFSGD 376 + D +F+ D Sbjct: 318 QTRPVIASNVEQPDYNGLRSFTAD 341 >gi|260598553|ref|YP_003211124.1| putative assembly protein [Cronobacter turicensis z3032] gi|260217730|emb|CBA32126.1| Protein asmA [Cronobacter turicensis z3032] Length = 613 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 39/369 (10%), Positives = 101/369 (27%), Gaps = 50/369 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RRVL L L V G + + ++ DFR Q G ++ + G ++ H+ P Sbjct: 1 MRRVLTTLMILLVVFFAGLSALVMLVNPNDFRSYMISQVERRSGYQLKLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + PLLS ++ V + + + S+ Sbjct: 61 LSILSGRMSLTAPGASQPLVSADNMRLDVALFPLLSHQLSVRQVMLKGAVVQLTPQSEAR 120 Query: 122 SNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 + + ++ V + + D+ + ++NLQ+ Sbjct: 121 HEPGAPVGPKSSAPLVEDTRGWSFDIARLKVADSVLVF-QHKDDEQVTVRNINLQMEQNE 179 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 + + + + ++ +SL L YP + Sbjct: 180 HH-----------------------DAQLELSGKISRDQRDLTLSLTAALNAADYPQTLS 216 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 + + + G + + + D + S L++ Sbjct: 217 AT----------VSQLSWQLHGADLP---RDGITGEGTFQARWLEGDKRLEFSALNLKA- 262 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK-KDDIQ 352 + + + V+ + + + + D + Sbjct: 263 ---NDSQLAGQGSVTLGDTPAWDLDLHFSALDLDKLLAPDPATTTAVAQQGQQSALPRPV 319 Query: 353 YSVNKKEEK 361 + + Sbjct: 320 IAAEVDQAP 328 >gi|327483750|gb|AEA78157.1| AsmA protein [Vibrio cholerae LMA3894-4] Length = 703 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 60/432 (13%), Positives = 129/432 (29%), Gaps = 56/432 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ I L L +++ + L ++ F+ QA G + ++G I P Sbjct: 1 MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL ++++ ++ +D + Sbjct: 61 IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120 Query: 120 GVSNWF-----------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQES 156 G SN R S ++ L + V ++I D+++ Sbjct: 121 GRSNLDALTQAQSKPASAPATTDSAPASQPRSSEPAAAWSIELGGVSVSNTVLEITDKKA 180 Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197 L D+ L + + D + A+G Sbjct: 181 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKNQQKFAAQGEAEVRLSADFKQYALRNIN 240 Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 N+ + K+ + +KA +L + A + ++ G+ Q I Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMQLNAQGSASLMVNQAISKV 300 Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + L S K L +S L + N+ D K V Sbjct: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 358 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + + + F+ + E D +E + + + N E + Sbjct: 359 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSSPATNAPAEVEPDLSA 418 Query: 368 ENQENFSGDKMI 379 N + +G+ I Sbjct: 419 LNALDVAGEISI 430 >gi|229529871|ref|ZP_04419261.1| AsmA protein [Vibrio cholerae 12129(1)] gi|229333645|gb|EEN99131.1| AsmA protein [Vibrio cholerae 12129(1)] Length = 749 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 58/432 (13%), Positives = 127/432 (29%), Gaps = 56/432 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ I L L +++ + L ++ F+ QA G + ++G I P Sbjct: 47 MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 106 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL ++++ ++ +D + Sbjct: 107 IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 166 Query: 120 GVSNWFQRKS-----------------------TMDMIHNVILEKIHVKGGRIKIIDQES 156 G SN ++ L + V ++I D+++ Sbjct: 167 GRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPTAAWSIELGGVSVSNAVLEITDKKA 226 Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197 L D+ L + + D + A+G Sbjct: 227 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 286 Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 N+ + K+ + +KA +L + A + ++ G+ Q I Sbjct: 287 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLVVNQAISKA 346 Query: 250 VFSVA--GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + L S K L +S L + N+ D K V Sbjct: 347 GLDALKVQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 404 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + + + F+ + E D +E + + + N E + Sbjct: 405 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSA 464 Query: 368 ENQENFSGDKMI 379 N + +G+ I Sbjct: 465 LNALDVAGEISI 476 >gi|168466220|ref|ZP_02700090.1| protein AsmA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194442823|ref|YP_002041390.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194401486|gb|ACF61708.1| protein AsmA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195631151|gb|EDX49711.1| protein AsmA [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 618 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 105/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E+D + D+ L + Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G +E + +L ++ + + + L + Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + + +V+ E+ ++ D Sbjct: 264 ----NDSSLTGQVQVTLAEQPEWQIDLQSSKLNLD 294 >gi|297578643|ref|ZP_06940571.1| asmA protein [Vibrio cholerae RC385] gi|297536237|gb|EFH75070.1| asmA protein [Vibrio cholerae RC385] Length = 703 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 58/432 (13%), Positives = 127/432 (29%), Gaps = 56/432 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ I L L +++ + L ++ F+ QA G + ++G I P Sbjct: 1 MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL ++++ ++ +D + Sbjct: 61 IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120 Query: 120 GVSNWF-----------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQES 156 G SN S ++ L + V ++I D+++ Sbjct: 121 GRSNLDALTQAQSKPASTPATTEPAPASQPSSSEPTAAWSIELGGVSVSNAVLEITDKKA 180 Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197 L D+ L + + D + A+G Sbjct: 181 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 240 Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 N+ + K+ + +KA +L + A + ++ G+ Q I Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMQLNAQGSASLMVNQAISKV 300 Query: 250 VFSVA--GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + L S K L +S L + N+ D K V Sbjct: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 358 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + + + F+ + E D +E + + + N E + Sbjct: 359 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSLSAPATNAPAEVEPDLSA 418 Query: 368 ENQENFSGDKMI 379 + +G+ I Sbjct: 419 LKALDVAGEISI 430 >gi|77361725|ref|YP_341300.1| AsmA protein [Pseudoalteromonas haloplanktis TAC125] gi|76876636|emb|CAI87858.1| putative AsmA protein [Pseudoalteromonas haloplanktis TAC125] Length = 649 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 57/372 (15%), Positives = 133/372 (35%), Gaps = 36/372 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + +G + + + P I Q G+ + +KG + + P Sbjct: 1 MKTLFKIIGVILLLCIALIVAAPFLIPTDAIFNKVSEQVEQTTGRTLTIKGDKTLSVFPA 60 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + D+ + GS + ++ L++ +L LL GE ++ I++P + Sbjct: 61 LKLELNDVHFANMKSGSRADMASMQQLAVHIPWLSLLDGEFKLDKFVINEPDILLETDKN 120 Query: 120 GVSNWFQRKSTMDMI---------------HNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 G +NW + + ++ L ++ + GG +D ++ +SD Sbjct: 121 GKANWQLFDAVAEQPKEQTGSAEAIKLPENFDIELGEVAIYGGTFTYLDGKTGVKQQISD 180 Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 L L I + S++ ++ +G + +R + + PAK + + Sbjct: 181 LELAI-----------LLPSLRKTLEVKGAITYMQERFELDVKLDTPAKAIEGT-TFNIQ 228 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS--DGN 282 ++DL ++ G +++GD K + + + F +G Sbjct: 229 QSLDSRLVDLTFEGTIAKQGQDIKGQLALSGDSVKNIAKWQGVELNAKDNAFNAFSVNGK 288 Query: 283 VRI--SRYKLQSILPN-SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339 + + ++KL+ ++ + K++++ + L N M DLN +K Sbjct: 289 MHLVGEQFKLEELIATLDALQIKGKSELNLGK--RLAVMANIDLGMLDLNPYLPETVAKK 346 Query: 340 KNKNDDLKKDDI 351 + D K Sbjct: 347 EQPTTDETKPAE 358 >gi|192292383|ref|YP_001992988.1| AsmA family protein [Rhodopseudomonas palustris TIE-1] gi|192286132|gb|ACF02513.1| AsmA family protein [Rhodopseudomonas palustris TIE-1] Length = 1274 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 57/306 (18%), Positives = 122/306 (39%), Gaps = 17/306 (5%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81 P IDW FR FE +AT ++G ++ V G + +LP PS+ + + + D + Sbjct: 21 VGPYLIDWNQFRTPFEAEATRLLGAQVRVAGALDARLLPTPSLRLQRVTVGGANDAGRFA 80 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEK 141 + L + L+ GE+R ++ I+ L+ L +G +W + + +++ Sbjct: 81 AAK-LDVEFSLGSLMRGELRADELSINGLSLDLGLDPQGRLDWPA--VGFSNLAALTVDR 137 Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201 +++ GRI + D S LSD+ + + ++ +G +R Sbjct: 138 LNLT-GRIALHDAASRSNLELSDI-----------AFSGELRAQAAALRGDGNFLLGGQR 185 Query: 202 SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261 F+++ + A AI L+ + A I DL G + + + +P++ G S+A + Sbjct: 186 YPFRLSTSRAADGDAIRLRAGINQGAGGIAADLDGLVRFGQSRPLFDGTASLAALAAATG 245 Query: 262 NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321 E RL+ + ++ + ++ + + + L+ + Sbjct: 246 --ETPRTPWRLAAKVEADPALAKLDQVEVSWGADDRALKLTGSGEARFGAAPRLDAKLSA 303 Query: 322 AESMHD 327 + D Sbjct: 304 RQLDAD 309 >gi|229525648|ref|ZP_04415053.1| AsmA protein [Vibrio cholerae bv. albensis VL426] gi|229339229|gb|EEO04246.1| AsmA protein [Vibrio cholerae bv. albensis VL426] Length = 701 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 58/430 (13%), Positives = 127/430 (29%), Gaps = 54/430 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ I L L +++ + L ++ F+ QA G + ++G I P Sbjct: 1 MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL ++++ ++ +D + Sbjct: 61 IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120 Query: 120 GVSNWF---------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 G SN S ++ L + V ++I D+++ Sbjct: 121 GRSNLDALTQAQSKPAPATTDSVPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKAGS 180 Query: 159 VYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF----------------- 197 L D+ L + + D + A+G Sbjct: 181 HTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNINLD 240 Query: 198 ------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 N+ + K+ + +KA +L + A + ++ G+ Q I Sbjct: 241 ASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMQLNAQGSASLVVNQAISKVGL 300 Query: 252 SV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + L S K L +S L + N+ D K V+ Sbjct: 301 DALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADVTL 358 Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369 + + F+ + E D +E + + + N E + Sbjct: 359 ADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSALK 418 Query: 370 QENFSGDKMI 379 + +G+ I Sbjct: 419 ALDVAGEISI 428 >gi|16765450|ref|NP_461065.1| assembly protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167991037|ref|ZP_02572136.1| protein AsmA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|16420654|gb|AAL21024.1| suppressor of ompF assembly mutants [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205330474|gb|EDZ17238.1| protein AsmA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261247335|emb|CBG25160.1| putative outer membrane assembly protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994176|gb|ACY89061.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158681|emb|CBW18193.1| putative outer membrane assembly protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913111|dbj|BAJ37085.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224769|gb|EFX49832.1| AsmA protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130443|gb|ADX17873.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989055|gb|AEF08038.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 618 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 105/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E+D + D+ L + Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G +E + +L ++ + + + L + Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + + +V+ E+ ++ D Sbjct: 264 ----NDSSLTGQVQVTLAEQPEWQIDLQSSKLNLD 294 >gi|269102247|ref|ZP_06154944.1| AsmA protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268162145|gb|EEZ40641.1| AsmA protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 706 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 50/441 (11%), Positives = 119/441 (26%), Gaps = 68/441 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++ + L ++ +G + ++ F+ Q G+ + + G I P Sbjct: 1 MKKFFYVVVALLLIIALGIGALLTLVNPNQFKPLISEQVKKATGRDLVIDGDISWRFFPT 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + K + +PL S ++ + + ++ H+ Sbjct: 61 LGLTVGKTAFRNPNGFTEPDLMKFTDAELSVSVMPLFSHQLEIGKVILNGAHIFIETRKD 120 Query: 120 GVSNWF------------------------QRKSTMDMIHNVILEKIHVKGGRIKI---- 151 GVSN + + + L I V I Sbjct: 121 GVSNLDGLGEASQSPSESSAHSEKSTKTQNDSATKSEQPWAISLAGIEVTNASATINNDQ 180 Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS--------- 202 D + +L+ I ++ + L ++ A+G +F+ + Sbjct: 181 TDSATLLTNLNLNLDRFIPGQWSAMNFDLDGNTNGIGFSAKGKTSFNLSSNYKHIALKDV 240 Query: 203 --------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248 ++ + + ++K Q + G L N + + Sbjct: 241 DFTASAESKTFHIPQLSLSLDHFDFGQWATIKYQTQGSIPNLKFASQGALRLNLDKALTK 300 Query: 249 GVFS--VAGDFSKLLNLELSAKKSRLSGNFK--ISDGNVRISRYKLQSILPNSSTDEDNK 304 F L K L+G+ + +++ +S KL + Sbjct: 301 AEFEQIALTADLSGAMLPRPEMKIALNGDAQYLVAEKLASLSNLKLVV----DEVTATGQ 356 Query: 305 TKVSQDEENLLNFSENGAESMHD-------LNETDFFEEEEKKNKNDDLKKDDIQYSVNK 357 + L F + + D + E K ++ D+ K + + Sbjct: 357 LSYQTSTKPKLQFDLHSPDINVDKWLGMSSKQNATIAQTESKSSQASDVAKGSVSQTKVT 416 Query: 358 KEEKDNSHDKENQENFSGDKM 378 + + + DK+ Sbjct: 417 EPNLSALKSFDLNGQLAVDKL 437 >gi|16761049|ref|NP_456666.1| assembly protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141254|ref|NP_804596.1| assembly protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052468|ref|ZP_03345346.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213423926|ref|ZP_03356906.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213425527|ref|ZP_03358277.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213584640|ref|ZP_03366466.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213647022|ref|ZP_03377075.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213864733|ref|ZP_03386852.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289825333|ref|ZP_06544582.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25364849|pir||AE0770 probable outer membrane assembly protein STY2333 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503347|emb|CAD02483.1| putative outer membrane assembly protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29136880|gb|AAO68445.1| putative outer membrane assembly protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 618 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 44/335 (13%), Positives = 106/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V G + + E+D + D+ L + Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVA-GSVLVFQHENDDQVTVRDIRLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G +E + +L ++ + + + L + Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + +V+ E+ ++ D Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLRSSKLNLD 294 >gi|167551068|ref|ZP_02344823.1| protein AsmA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205324040|gb|EDZ11879.1| protein AsmA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 618 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 45/387 (11%), Positives = 121/387 (31%), Gaps = 51/387 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E+D + D+ L + Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G +E + +L ++ + + + L + Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 + + +V+ E+ ++ D N + ++ + Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLRSSKLNLD-NLLPHHSAVAQTGGAVSQGQNTLP 318 Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379 + + ++ + ++F+ + ++ Sbjct: 319 LTRPVIASRVSAPPYQGLQSFTAEIVL 345 >gi|317048806|ref|YP_004116454.1| AsmA family protein [Pantoea sp. At-9b] gi|316950423|gb|ADU69898.1| AsmA family protein [Pantoea sp. At-9b] Length = 599 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 59/386 (15%), Positives = 120/386 (31%), Gaps = 49/386 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR++ L L VV+ G + L ++ DFR +Q G ++ V G ++ H+ P Sbjct: 1 MRRLITTLAILLVVVVAGMTALVLLVNPNDFRTYMVQQVEQRSGYRLQVNGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + E + + PLLS ++ V + + + S Sbjct: 61 LSILAGRMSLTAPGASQPVITAENMRLDVNLWPLLSHQLSVSQVMLKNAIIRVTPESDAQ 120 Query: 122 S-------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + + + K+ + + Q D+ Y DLNL ++ Sbjct: 121 KPSGSPVGPRDAEPTASSNGWSFDIGKLRLADSLLIWQQQGGDE-YNFRDLNLSLNQDAS 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 + +N +SLK QL YP ++ Sbjct: 180 -----------------------KQASIDLSTRISRNQRNLTVSLKGQLDAAQYPHRLNG 216 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 + +++ G + K LSG+ + ++ + + KLQ Sbjct: 217 RIDA----------LDYTLDGANLPTQGI-----KGTLSGDGEWNNDRQQFALNKLQL-- 259 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-LNETDFFEEEEKKNKNDDLKKDDIQY 353 + + D + S LN + A D L + + ++ I Sbjct: 260 SANDSALDGSAEGSLLLPQQLNLKLHAAALNLDNLMASAPVSDSSAPQHASVIRTPVIAE 319 Query: 354 SVNKKEEKDNSHDKENQENFSGDKMI 379 + + N + D+ + Sbjct: 320 PRERDNSDSPLTMMDLTLNLTADQAV 345 >gi|198245281|ref|YP_002216207.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197939797|gb|ACH77130.1| protein AsmA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 618 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 41/335 (12%), Positives = 103/335 (30%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E+D + D+ L + Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP + Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYPHNL 216 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + + G +E + +L ++ + + + L + Sbjct: 217 TASIE----------QLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + +V+ E+ ++ D Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLQSSKLNLD 294 >gi|300704818|ref|YP_003746421.1| outer membrane biogenesis protein, asma family [Ralstonia solanacearum CFBP2957] gi|299072482|emb|CBJ43832.1| putative outer membrane biogenesis protein, AsmA family [Ralstonia solanacearum CFBP2957] Length = 749 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 61/429 (14%), Positives = 120/429 (27%), Gaps = 60/429 (13%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58 RV++GL V++ A L DW+ + + +G+ A+ G + + Sbjct: 6 RVILGLVITPVVIMASAAVFVLTFDWSRAKPYLNDHVSQAIGRPFAINGDLSLTWKKPEG 65 Query: 59 -------LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P + DI I + + ++ L+ E LPLL+ I + + +D Sbjct: 66 ESGWRAYVPWPRLIANDITIGNPDWTRRPHVATVQRLTFVLEALPLLAHRIVIPSVTLDT 125 Query: 110 PHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVKGGRIKIIDQE-----SDQVYF 161 P + ++ +NW + + + L +I G +++ D + V Sbjct: 126 PVVALERDNQNRNNWTFHLGTQDSKPSDWKLELREIAFSKGSVQLDDDIKRIHLAATVDT 185 Query: 162 LSDLNLQISARFLNIISPLSIDSIKG-------------------------SVIAEGTGN 196 + + L +A I + + +GT N Sbjct: 186 VDNQTLYTAANGTAISGSEQPPVVPTASGAAASGAAAKAPVAADPQQPYGLAWTVKGTYN 245 Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGD 256 R K ++ +Q IDL G L ++G Sbjct: 246 NAAIRGGGKAGGVLRLQDAHRPYPLQADVTVGKTRIDLAGTLTNPASLTALDLRLHLSGA 305 Query: 257 FSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 L RL G + + R ++ + + Sbjct: 306 SMAHLYPLTGVVLPDTPPFDTRGRLIGELRRQGSSWRYEKFTGRVGGSD----LGGTLTF 361 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + E G H L D + ++D+ K Sbjct: 362 AMRPEPGQRPQLTGELVSHQLLFADLAPIIGADSNASKQRRDEPVRQPADKVLPVEPFRT 421 Query: 368 ENQENFSGD 376 + D Sbjct: 422 DRWNAIDAD 430 >gi|168259575|ref|ZP_02681548.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205351130|gb|EDZ37761.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 618 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E+D + D+ L + Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G +E + +L ++ + + + L + Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + +V+ E+ ++ D Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLRSSKLNLD 294 >gi|254226389|ref|ZP_04919977.1| asmA protein [Vibrio cholerae V51] gi|125621078|gb|EAZ49424.1| asmA protein [Vibrio cholerae V51] Length = 701 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 58/430 (13%), Positives = 128/430 (29%), Gaps = 54/430 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ I L L +++ + L ++ F+ QA G + ++G I P Sbjct: 1 MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL ++++ ++ +D + Sbjct: 61 IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120 Query: 120 GVSNWFQRKS---------------------TMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 G SN ++ L + V ++I D+++ Sbjct: 121 GRSNLDALTQAQSKPAPATTDSAPASQSSSSEPTAAWSIELGGVSVSNAVLEITDKKAGS 180 Query: 159 VYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF----------------- 197 L D+ L + + D + A+G Sbjct: 181 HTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNINLD 240 Query: 198 ------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 N+ + K+ + +KA +L + A + +++ G+ Q I Sbjct: 241 ASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAAEMKLNVQGSASLMVNQAISKVGL 300 Query: 252 SV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + L S K L +S L + N+ D K V+ Sbjct: 301 DALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADVTL 358 Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369 + + F+ + E D +E + + + N E + N Sbjct: 359 ADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPAANVPAEVEPDLSALN 418 Query: 370 QENFSGDKMI 379 + +G+ I Sbjct: 419 ALDVAGEISI 428 >gi|153215070|ref|ZP_01949787.1| asmA protein [Vibrio cholerae 1587] gi|124114933|gb|EAY33753.1| asmA protein [Vibrio cholerae 1587] Length = 703 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 58/432 (13%), Positives = 127/432 (29%), Gaps = 56/432 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ I L L +++ + L ++ F+ QA G + ++G I P Sbjct: 1 MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL ++++ ++ +D + Sbjct: 61 IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120 Query: 120 GVSNWF-----------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQES 156 G SN S ++ L + V ++I D+++ Sbjct: 121 GRSNLDALTQAQSKPASTPATTEPAPASQPSSSEPTAAWSIELGGVSVSNAVLEITDKKA 180 Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197 L D+ L + + D + A+G Sbjct: 181 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 240 Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 N+ + K+ + +KA +L + A + ++ G+ Q I Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAISKV 300 Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + L S K L +S L + N+ D K V Sbjct: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 358 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + + + F+ + E D +E + + + N E + Sbjct: 359 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSA 418 Query: 368 ENQENFSGDKMI 379 + +G+ I Sbjct: 419 LKALDVAGEISI 430 >gi|288934424|ref|YP_003438483.1| AsmA family protein [Klebsiella variicola At-22] gi|288889153|gb|ADC57471.1| AsmA family protein [Klebsiella variicola At-22] Length = 615 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 47/385 (12%), Positives = 120/385 (31%), Gaps = 56/385 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+L L L +V++ G ++ L ++ DFR + G ++ + G ++ H+ P Sbjct: 1 MRRILTTLMILLAVIVAGLTSLVLLVNPNDFRAYMVHEVAERSGYQLELDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS +++V + + + ++ V Sbjct: 61 LSILSGRMTLTARGAEEPVIRADNMRLDVALLPLLSHQLQVKQVMLKGAVIQLTPKTEAV 120 Query: 122 SNWFQ---------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + ++ D + + ++ V + E+ + + D+ LQ+ Sbjct: 121 RDSAAPVVPHDNTLPQAPEDRGWSYDVRQLQVAD-SVLFFQHENGEQVTVRDIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP + Sbjct: 180 ENHRAT-----------------------VDFSGRINRDQRDLALSFSATVQGGDYPHSL 216 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + + + G + + L +++ +R L Sbjct: 217 KADFS----------QLSWQLRGAELP---PDGINGQGSLQASWQEDGKTLRFDNLNL-- 261 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDD 350 S + V + + + D L + + + + Sbjct: 262 --MASGSTLTGNGSVVLGDRPDWSLDLHATTLNLDSLLAPSSPATDSSASQQGQSQTRPL 319 Query: 351 IQYSVNKKEEKDNSHDKENQENFSG 375 + E D ++ F+G Sbjct: 320 RPVIADSDER----EDYQSLRGFNG 340 >gi|238761093|ref|ZP_04622070.1| hypothetical protein ykris0001_34380 [Yersinia kristensenii ATCC 33638] gi|238761346|ref|ZP_04622322.1| hypothetical protein ykris0001_20790 [Yersinia kristensenii ATCC 33638] gi|238700320|gb|EEP93061.1| hypothetical protein ykris0001_20790 [Yersinia kristensenii ATCC 33638] gi|238700573|gb|EEP93313.1| hypothetical protein ykris0001_34380 [Yersinia kristensenii ATCC 33638] Length = 608 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 46/379 (12%), Positives = 105/379 (27%), Gaps = 55/379 (14%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70 L V++ G + L ++ DFR +Q G + + G ++ H+ P S+ Sbjct: 3 ILLVVLVAGMSALVLLVNPNDFRAYMVKQVERKSGYHLQLDGDLRWHVWPQLSIIVGRTA 62 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--- 127 + + E + + + PLLS ++ V + + + S+ Sbjct: 63 LTAPGAAAPVVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLTPDSEAQQEPGAPVAP 122 Query: 128 ----KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + K+ V + ++DQ + D+NL++S Sbjct: 123 AGNAPLDEHRAWKLDINKVQVADSLLIWQRSDNDQ-VNVRDINLELSQDPQR-------- 173 Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243 N ++ SL YP Sbjct: 174 ---------------QVHITLDSRVNRNQRDLTFSLVADADMRHYPQQFS---------- 208 Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 I + + G + + + L +++ + +++ + ++ Sbjct: 209 ASISQFTYKLEGADIPVGGVS---GQGTLQASYQRDIQQLLLNQLSFTA----NNNQLTG 261 Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS---VNKKEE 360 K + + D F E K + + + + + Sbjct: 262 SAKATLGPVPEYVINLAADNLNLD----SIFGWEPKSTASAKATAKVATVTSPVIAAQID 317 Query: 361 KDNSHDKENQENFSGDKMI 379 D D E +FS + Sbjct: 318 DDVGQDLEALRDFSAQMTL 336 >gi|168242195|ref|ZP_02667127.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194447724|ref|YP_002046170.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194406028|gb|ACF66247.1| protein AsmA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205338325|gb|EDZ25089.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 618 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E+D + D+ L + Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G +E + +L ++ + + + L + Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + +V+ E+ ++ D Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLRSSKLNLD 294 >gi|290508628|ref|ZP_06547999.1| AsmA protein [Klebsiella sp. 1_1_55] gi|289778022|gb|EFD86019.1| AsmA protein [Klebsiella sp. 1_1_55] Length = 615 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 47/385 (12%), Positives = 120/385 (31%), Gaps = 56/385 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+L L L +V++ G ++ L ++ DFR + G ++ + G ++ H+ P Sbjct: 1 MRRILTTLMILLAVIVAGLTSLVLLVNPNDFRAYMVHEVAERSGYQLELDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS +++V + + + ++ V Sbjct: 61 LSILSGRMTLTARGAEEPVIRADNMRLDVALLPLLSHQLQVKQVMLKGAVIQLTPKTEAV 120 Query: 122 SNWFQ---------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + ++ D + + ++ V + E+ + + D+ LQ+ Sbjct: 121 RDSAAPVVPHDNTLPQAPEDRGWSYDVRQLQVAD-SVLFFQHENGEQVTVRDIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP + Sbjct: 180 ENHRAT-----------------------VDFSGRINRDQRDLALSFSATVQGGDYPHSL 216 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + + + G + + L +++ +R L Sbjct: 217 KADFS----------QLSWQLRGAELP---PDGINGQGSLQASWQEDGKTLRFDNLNL-- 261 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDD 350 S + V + + + D L + + + + Sbjct: 262 --MASGSTLTGNGSVVLGDRPDWSLDLHATTLNLDSLLAPSSPATDSSASQQGQSQTRPL 319 Query: 351 IQYSVNKKEEKDNSHDKENQENFSG 375 + E D ++ F+G Sbjct: 320 RPVIADSDER----EDYQSLRGFNG 340 >gi|298293074|ref|YP_003695013.1| AsmA family protein [Starkeya novella DSM 506] gi|296929585|gb|ADH90394.1| AsmA family protein [Starkeya novella DSM 506] Length = 1205 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 59/340 (17%), Positives = 128/340 (37%), Gaps = 23/340 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ +L+ + + + AF P +DWT +R FE QA ++G + ++G I ILP Sbjct: 1 MQNLLLTIASAIILAVAAAFAAPFVVDWTQWRPQFEAQAARVIGAPVVIRGPIDAQILPT 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P + +D+ I + G ++ R L+ G++ + I +P + + + G Sbjct: 61 PRIVLRDVSI-GVDGGGTGLAAAEVNGRLSLNALMRGQVVADRLDIQRPRMRLVVDATGK 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + ++ + G ++++D+ +D+ + + D+++ Sbjct: 120 L---ALPTGAVRPAGFTIAELGITDGSLELVDRANDRTFKVDDIDV-----------TGD 165 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 I G EG D R +++ A + L++ L + P+ ID G L Sbjct: 166 IAGALGPARLEGEVETDGVRRKLRVSLAAFAPDGTGKLRLGLQNVGSPLSIDADGVLSLA 225 Query: 242 EKQPIYSGVFSVAGDFSKLLN-------LELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 +P ++G ++A + L K L+G ++ + +S L Sbjct: 226 GGKPSFNGRAALAKAATPALRDADGTTPPADPLKGWSLAGTADVTAQAIAVSDLSLTLEA 285 Query: 295 PNSSTDEDNKTKVSQDEE-NLLNFSENGAESMHDLNETDF 333 + +++ + A DLN Sbjct: 286 AERPVELTGTARLTSATKAQPSRLEMKLAARQIDLNAATG 325 >gi|237732116|ref|ZP_04562597.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226907655|gb|EEH93573.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 617 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 46/386 (11%), Positives = 117/386 (30%), Gaps = 55/386 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF------Y 115 S+ + + + + + + + PLLS ++ V + + + Sbjct: 61 LSILSGRVVLTAEGASEPLIRADNMRLDVALWPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 116 LSSK---GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + ++ V + E D+ + D+ L++ Sbjct: 121 RGKDAPVAPKDNMLPDLAEDKGWSFDIARLRVADSVLVF-QHEDDEQVTVRDIRLEMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP + Sbjct: 180 SQHRGT-----------------------FDFSGRVNRDQRDLALSFNGTVDASDYPHNL 216 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + + G + + L + + S+ L + Sbjct: 217 SANIE----------QLSWQLQGADLP---PQGINGQGHLQAQWLEEKKQLSFSQINLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 + + + V+ E+ + D + + D+++ Q Sbjct: 264 ----NDSSFSGQAHVALLEKPEWAVDLKFGQLNLD---NLLVQHDAAATAKGDVQQGQSQ 316 Query: 353 YSVNK--KEEKDNSHDKENQENFSGD 376 ++ + + ++ + + FS D Sbjct: 317 STLARPVIASQVDAVSYQGLKGFSAD 342 >gi|312958698|ref|ZP_07773218.1| hypothetical protein PFWH6_0596 [Pseudomonas fluorescens WH6] gi|311287241|gb|EFQ65802.1| hypothetical protein PFWH6_0596 [Pseudomonas fluorescens WH6] Length = 689 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 47/380 (12%), Positives = 107/380 (28%), Gaps = 43/380 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56 R+++ + F +++ A +F DW + + + + + A+ G + + Sbjct: 5 RKIVAWICASFVLLIAVAVLFLVFFDWNRIKPPLNAKVSEELHRPFAINGDLAVVWRREP 64 Query: 57 ------HILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P+P V +D+ + + ++ + +R L LL + + + + Sbjct: 65 DEGGWRAWVPWPHVIAEDLSLGNPDWSKKPQMVTLKKVELRISPLALLVQRVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQR-----KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 +P + G +NW + V + I G + + DQ + Sbjct: 125 EPSAELQRLADGRANWTFKFDPKDPDAEPSNWVVDIGAIGFDKGHVTLDDQTLKTQLDVI 184 Query: 164 DLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAFKITAN--FPAK 213 L F I+ + + G + ++ + Sbjct: 185 VDPLGKPIPFGEIVGDADAKKALEKGAAPQDYAFGLKVKGQYHGQKLDGAGKIGGLLALQ 244 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + A +Q I L G L +AG L Sbjct: 245 DAAKPFPLQAQVNIADTRIALAGTLTDPRNLGALDLRLKLAGASLGNLYPLTGVTLPDSP 304 Query: 271 --RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE-NGA 322 G+ + + R + + + N V+ L+ + + Sbjct: 305 AYSTDGHLIAKLHEADGASFRYENFNGKIGNSD---IHGNLAYVASQPRPKLSGALVSNQ 361 Query: 323 ESMHDLNETDFFEEEEKKNK 342 M DL + K+ Sbjct: 362 LLMADLAPLIGADSNAKQKA 381 >gi|188533461|ref|YP_001907258.1| putative assembly protein [Erwinia tasmaniensis Et1/99] gi|188028503|emb|CAO96365.1| AsmA suppressor of OmpF assembly mutants [Erwinia tasmaniensis Et1/99] Length = 614 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 48/390 (12%), Positives = 107/390 (27%), Gaps = 54/390 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R + L L VV+ G + + ++ DFR Q G ++A G ++ H+ P Sbjct: 1 MKRFITTLAILLVVVVSGMTALVMLVNPNDFRAYMVHQVEQRSGYRLAFNGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ I + + + + LPLLS ++ V + + + S+ Sbjct: 61 LSILSGPITVTAPGAQQPVVSASNMRLDVDLLPLLSHQLSVKQVMLKGAVIRLTQDSESQ 120 Query: 122 SNWFQ-----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + + + + + Q + + + DLNL + Sbjct: 121 RAADAPVGPAGSSAFSPADDVARGWKFDISHLRIADSLLVW-QQANGEQLNVRDLNLTLD 179 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 F N + +S+ L YP Sbjct: 180 QNQPR-----------------------QVHVEFSSRVNRDQRELHLSVSSDLDISNYPQ 216 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 I+ S + + +E A +++ + I ++ L Sbjct: 217 RINASIQ----------SLDYQLKAVDLPPAGIEGKA---QMTARWDILTQRFSLNDILL 263 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKK 348 + + + + L + D L T+ + Sbjct: 264 NA----NDSQLSGTLSGTFGGRPELLADLHANHLDLDSLLGLTEVADGATNAAVQPGGHA 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKM 378 I + + + Q + D++ Sbjct: 320 PVIARMPVTDNAHNVLNALDGQLTLAVDRL 349 >gi|205353263|ref|YP_002227064.1| assembly protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273044|emb|CAR37992.1| putative outer membrane assembly protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628350|gb|EGE34693.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 618 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E+D + D+ L + Sbjct: 121 RSDDAPVAPRDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G +E + +L ++ + + + L + Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + +V+ E+ ++ D Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLQSSKLNLD 294 >gi|197264768|ref|ZP_03164842.1| protein AsmA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200387201|ref|ZP_03213813.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207857556|ref|YP_002244207.1| assembly protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|197243023|gb|EDY25643.1| protein AsmA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|199604299|gb|EDZ02844.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|206709359|emb|CAR33699.1| putative outer membrane assembly protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 618 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E+D + D+ L + Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G +E + +L ++ + + + L + Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + +V+ E+ ++ D Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLQSSKLNLD 294 >gi|229505366|ref|ZP_04394876.1| AsmA protein [Vibrio cholerae BX 330286] gi|229510964|ref|ZP_04400443.1| AsmA protein [Vibrio cholerae B33] gi|229518085|ref|ZP_04407529.1| AsmA protein [Vibrio cholerae RC9] gi|229608385|ref|YP_002879033.1| AsmA protein [Vibrio cholerae MJ-1236] gi|229344800|gb|EEO09774.1| AsmA protein [Vibrio cholerae RC9] gi|229350929|gb|EEO15870.1| AsmA protein [Vibrio cholerae B33] gi|229357589|gb|EEO22506.1| AsmA protein [Vibrio cholerae BX 330286] gi|229371040|gb|ACQ61463.1| AsmA protein [Vibrio cholerae MJ-1236] Length = 749 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 57/432 (13%), Positives = 126/432 (29%), Gaps = 56/432 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ I L L +++ + L ++ F+ QA G + ++G I P Sbjct: 47 MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 106 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL ++++ ++ +D + Sbjct: 107 IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 166 Query: 120 GVSNWFQRKS-----------------------TMDMIHNVILEKIHVKGGRIKIIDQES 156 G SN ++ L + V ++I D+++ Sbjct: 167 GRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKA 226 Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197 L D+ L + + D + A+G Sbjct: 227 GSHTKLYDVQLSVAEFVPDNWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 286 Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 N+ + K+ + +KA +L + A + ++ G+ Q I Sbjct: 287 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAISKV 346 Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + L S K L +S L + N+ D K V Sbjct: 347 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 404 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + + + F+ + E D +E + + + N E + Sbjct: 405 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSA 464 Query: 368 ENQENFSGDKMI 379 + +G+ I Sbjct: 465 LKALDVAGEISI 476 >gi|238912549|ref|ZP_04656386.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 618 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E+D + D+ L + Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G +E + +L ++ + + + L + Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + +V+ E+ ++ D Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLRSSKLNLD 294 >gi|258626235|ref|ZP_05721082.1| asmA protein [Vibrio mimicus VM603] gi|258581287|gb|EEW06189.1| asmA protein [Vibrio mimicus VM603] Length = 704 Score = 146 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 50/380 (13%), Positives = 115/380 (30%), Gaps = 56/380 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ + L L V++ + L ++ F+ QA G + ++G I P Sbjct: 1 MKKLFLSLLGLVVVIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PL ++++ ++++D + Sbjct: 61 IGFELGKTELKNPQGFQSANLFKVESVGIDVSVMPLFDKQLKIGNIHLDGAEFHLETLKD 120 Query: 120 GVSNWFQR-----------------------KSTMDMIHNVILEKIHVKGGRIKIIDQES 156 G SN S ++ L + V ++I+D ++ Sbjct: 121 GRSNLDALTQAQSKQAALPAATESMPTPETTSSEPTAAWSIELGGVSVSNAVLEIVDHKA 180 Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197 L D+ L + + I + + A+G Sbjct: 181 GTQTKLYDVQLSVSEFMPDSWTKAIFAAKGNKDQQKFAAQGDAEVRLSADFKQYALRNIN 240 Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 N+ + K+ + +KA +L + A + ++ G+ + I Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAKGSASLMVDKAISKV 300 Query: 250 VFS--VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + L S K L ++ L + N+ D K V Sbjct: 301 GLEGLKLEADLEGAALPQSPMKIGLDSQISFDLTKSHLNVL-LNKLTANA-LSFDGKADV 358 Query: 308 SQDEENLLNFSENGAESMHD 327 + + + F+ + E D Sbjct: 359 TLADIPKVRFNVHSPEIDLD 378 >gi|168818189|ref|ZP_02830189.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205345048|gb|EDZ31812.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086551|emb|CBY96322.1| Protein asmA Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 618 Score = 146 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E+D + D+ L + Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G +E + +L ++ + + + L + Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + +V+ E+ ++ D Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLQSSKLNLD 294 >gi|204929213|ref|ZP_03220356.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321757|gb|EDZ06956.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 618 Score = 146 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E+D + D+ L + Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G +E + +L ++ + + + L + Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + +V+ E+ ++ D Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLQSSKLNLD 294 >gi|322615149|gb|EFY12071.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617741|gb|EFY14637.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624665|gb|EFY21496.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626884|gb|EFY23680.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634070|gb|EFY30806.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635739|gb|EFY32449.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640257|gb|EFY36920.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646326|gb|EFY42839.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649419|gb|EFY45855.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656540|gb|EFY52829.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661515|gb|EFY57739.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665597|gb|EFY61781.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667121|gb|EFY63288.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671127|gb|EFY67255.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675232|gb|EFY71309.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680841|gb|EFY76876.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687016|gb|EFY82993.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192780|gb|EFZ78007.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198789|gb|EFZ83888.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204920|gb|EFZ89911.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208245|gb|EFZ93189.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210946|gb|EFZ95807.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215730|gb|EGA00473.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221850|gb|EGA06252.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223918|gb|EGA08215.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231175|gb|EGA15290.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233610|gb|EGA17702.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237680|gb|EGA21740.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245663|gb|EGA29657.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247740|gb|EGA31682.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252956|gb|EGA36789.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256758|gb|EGA40483.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260023|gb|EGA43650.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323268247|gb|EGA51722.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272192|gb|EGA55605.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 618 Score = 146 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E+D + D+ L + Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G +E + +L ++ + + + L + Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + +V+ E+ ++ D Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLQSSKLNLD 294 >gi|197249077|ref|YP_002147079.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197212780|gb|ACH50177.1| protein AsmA [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 618 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E+D + D+ L + Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G +E + +L ++ + + + L + Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + +V+ E+ ++ D Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLQSSKLNLD 294 >gi|168236280|ref|ZP_02661338.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194735691|ref|YP_002115209.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194711193|gb|ACF90414.1| protein AsmA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290452|gb|EDY29807.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 618 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E+D + D+ L + Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G +E + +L ++ + + + L + Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + +V+ E+ ++ D Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLQSSKLNLD 294 >gi|161502726|ref|YP_001569838.1| putative assembly protein [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864073|gb|ABX20696.1| hypothetical protein SARI_00776 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 618 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTAQGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E+D+ + D++L + Sbjct: 121 RSDDAPIAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDEQVTVRDIHLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ ++S + YP Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLSLSFNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G +E + + ++ + + + L + Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQFQAQWQEAQKRLSFNYLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + +V+ E A D Sbjct: 264 ----NDSSLTGHVQVTMAERPEWQIDLQSARLNLD 294 >gi|261211927|ref|ZP_05926213.1| AsmA protein [Vibrio sp. RC341] gi|260838535|gb|EEX65186.1| AsmA protein [Vibrio sp. RC341] Length = 703 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 53/380 (13%), Positives = 114/380 (30%), Gaps = 56/380 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ I L L +++ + L ++ F+ QA G + ++G I P Sbjct: 1 MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL ++++ ++ +D + Sbjct: 61 IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120 Query: 120 GVSNWF-----------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQES 156 G SN S ++ L + V ++I D+++ Sbjct: 121 GRSNLDALTQAQSKPASTPATTEPVPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKA 180 Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197 L D+ L + + D + A+G Sbjct: 181 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 240 Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 N+ + K+ + +KA +L + A + ++ G+ Q I Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAISKV 300 Query: 250 VFS--VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + L S K L +S L + N+ D K V Sbjct: 301 GLDELKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 358 Query: 308 SQDEENLLNFSENGAESMHD 327 + + + F+ + E D Sbjct: 359 TLADIPKVRFNLHSPEIDLD 378 >gi|224583391|ref|YP_002637189.1| assembly protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224467918|gb|ACN45748.1| putative outer membrane assembly protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 618 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E+D + D+ L + Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G +E + +L ++ + + + L + Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + +V+ ++ ++ D Sbjct: 264 ----NDSSLTGHVQVTLADQPEWQIDLRSSKLNLD 294 >gi|148257369|ref|YP_001241954.1| hypothetical protein BBta_6121 [Bradyrhizobium sp. BTAi1] gi|146409542|gb|ABQ38048.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 1258 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 57/405 (14%), Positives = 148/405 (36%), Gaps = 44/405 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ L+GL F + L+ A P F+DW FR FE +A+ I+G + V G + +LP Sbjct: 1 MQTTLLGLAIAFILALLAALIGPFFVDWNQFRPQFEAEASKIIGVPVRVAGALDARLLPT 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P++ + + + + L + L+ GE + ++ I + L +KG Sbjct: 61 PTLRLRQVTFGGANHLGK-LRADKLDVEFSLGDLMRGEWKANELTIGGMAADLGLDAKGQ 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + + +++ ++ GR+ + D S L+D+ + Sbjct: 120 VDLPAASGR-FNLAALAIDRFNLT-GRVALHDAASRSTLELTDI-----------VFSGD 166 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + S+ GS+ +G + R F+++++ ++ + + + + P +I D+ G + + Sbjct: 167 VRSLAGSLRGDGAVSIRGARFPFRVSSSQDKESGGLRVHLNIDPGERAVIADVEGLISFP 226 Query: 242 EKQPIYSGVFSVAG--------------------------DFSKLLNLELSAKKSRLSGN 275 + P + G +++ + A R++ Sbjct: 227 NRSPRFEGALTLSSPPKEQGDGKDKLAAGDPAKPQSANPPSAKSSPAVAAGATPWRIAAK 286 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335 ++ + ++ + S V +L + + + D + + Sbjct: 287 VGGDQAAAKLDQIEVTFGEEDRSLKFTGSGDVRFGAAPMLRATLSARQLDADKLLSGGGD 346 Query: 336 EEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMIL 380 +++ ++ + + + + FS ++++L Sbjct: 347 VRDRRAMAPARVLPALRNWIAQLPTLPLPANVQ----FSTEQIML 387 Score = 37.9 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 39/327 (11%), Positives = 85/327 (25%), Gaps = 21/327 (6%) Query: 43 IVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRV 102 + + ++G I + V ++ + GS + +I ++ A L ++ Sbjct: 463 RTQRPLRLRGDISVAPD---RVAIDSLK-ADIDGGSVDGRIALITKAAGAGSRLETALKG 518 Query: 103 FDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI--------IDQ 154 + +D + W S I + + + +DQ Sbjct: 519 DRLDLDAALAVARSLAGASGEWPTEASVALDIGRAKISGQELSPLATRFSYDPKTIALDQ 578 Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214 + L + S+ GS+ + + Sbjct: 579 LKFGQSGGVSSEGSGRFDRADATGRLVLTSMAGSLKEITSLVQPIAPRIAARFDALSIPS 638 Query: 215 KAISLKIQLFPLAYPIIID-LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-- 271 A LK+ L P ++ + P G ++ S Sbjct: 639 GAARLKLTLDLAKDPTNLERSQAKAVLDLDAPQLKGSATLTAKPSAAALRSFEVDAIDRT 698 Query: 272 ---LSGNFKISDGNVRISRYKLQSILP--NSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + G++ ++ L N + S +N +GA Sbjct: 699 ELGIESRLSSEQGHLVLALLGLDRFAAVGNGPAQFEASVSGSWRAPLRVNAKLSGAGLDG 758 Query: 327 DLNET-DFFEEEEKKNKNDDLKKDDIQ 352 D T + + E K N L+ ++ Sbjct: 759 DAQGTIEPWGEFTKATANLRLRSANLA 785 >gi|62180692|ref|YP_217109.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161613198|ref|YP_001587163.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|62128325|gb|AAX66028.1| suppressor of ompF assembly mutants [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161362562|gb|ABX66330.1| hypothetical protein SPAB_00908 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|322715166|gb|EFZ06737.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 618 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E+D + D+ L + Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G +E + +L ++ + + + L + Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + +V+ ++ ++ D Sbjct: 264 ----NDSSLTGHVQVTLADQPEWQIDLRSSKLNLD 294 >gi|168229444|ref|ZP_02654502.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472951|ref|ZP_03078935.1| protein AsmA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194459315|gb|EDX48154.1| protein AsmA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205335755|gb|EDZ22519.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 618 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E+D + D+ L + Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G +E + +L ++ + + + L + Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + +V+ ++ ++ D Sbjct: 264 ----NDSSLTGHVQVTLADQPEWQIDLRSSKLNLD 294 >gi|153828173|ref|ZP_01980840.1| asmA protein [Vibrio cholerae 623-39] gi|148876415|gb|EDL74550.1| asmA protein [Vibrio cholerae 623-39] Length = 703 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 57/432 (13%), Positives = 127/432 (29%), Gaps = 56/432 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ I L L +++ + L ++ F+ QA G + ++G I P Sbjct: 1 MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL ++++ ++ +D + Sbjct: 61 IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120 Query: 120 GVSNWFQRKS-----------------------TMDMIHNVILEKIHVKGGRIKIIDQES 156 G SN ++ L + V ++I D+++ Sbjct: 121 GRSNLDALTQAQSKPASAPATTDSAPASQPSLSEPTAAWSIELGGVSVSNAVLEITDKKA 180 Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197 L D+ L + + D + A+G Sbjct: 181 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 240 Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 N+ + K+ + +KA +L + A + ++ G+ Q I Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAISKV 300 Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + L S K L +S L + N+ + D K V Sbjct: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANAQS-FDGKADV 358 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + + + F+ + E D +E + + + N E + Sbjct: 359 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSA 418 Query: 368 ENQENFSGDKMI 379 + +G+ I Sbjct: 419 LKALDVAGEISI 430 >gi|119472048|ref|ZP_01614306.1| putative AsmA protein [Alteromonadales bacterium TW-7] gi|119445183|gb|EAW26475.1| putative AsmA protein [Alteromonadales bacterium TW-7] Length = 660 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 60/404 (14%), Positives = 138/404 (34%), Gaps = 45/404 (11%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ +L G + + + P I + G+ + + G + + P Sbjct: 1 MKTLLKIFGVILLLCIALIVAAPFLIPTDTIFNKVSEEVQKTTGRTLTINGDKTLSVFPA 60 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + D+ + GS + ++ L++ + L GE ++ I++P + Sbjct: 61 LKLELNDVHFANMQTGSRADMASMQQLAVHIPWFSLFGGEFKLDKFVINEPDILLETDKN 120 Query: 120 GVSNWFQRKSTMDMI-------------------HNVILEKIHVKGGRIKIIDQESDQVY 160 G +NW + + ++ L ++ + GG +D ++ Sbjct: 121 GKANWQLFDAVAEQPTEQPTEQTEPGEAIKLPASFDIKLGEVAIYGGTFTYLDGQTGAKQ 180 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 +SDL L I + S++ ++ +G + +R + + PAK + Sbjct: 181 QISDLELAI-----------LLPSLRKTLEVKGGVTYMQERFELDVKLDTPAKAIEGA-T 228 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS- 279 ++ ++DL N + G +++GD K L + F Sbjct: 229 FEVTQSLDSRLVDLTFNGSIARQGKDIKGELALSGDSVKELATWQGVDLNAKENAFNAFS 288 Query: 280 -DGNVRI--SRYKLQSILPN-SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335 +G + + ++ L+ + K+++S N L+ + N M DLN + Sbjct: 289 VNGKMHLLGEKFNLEELTATLDELQIKGKSEISLG--NRLDINANVDLGMLDLNP--YLP 344 Query: 336 EEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 E K + ++ + D D F+ + +I Sbjct: 345 EAVAKQQAPQNEEPK---AAQPIVWDDTKIDLSALNAFNANVVI 385 >gi|206576558|ref|YP_002237500.1| AsmA protein [Klebsiella pneumoniae 342] gi|206565616|gb|ACI07392.1| AsmA protein [Klebsiella pneumoniae 342] Length = 615 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 47/385 (12%), Positives = 120/385 (31%), Gaps = 56/385 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+L L L +V++ G ++ L ++ DFR + G ++ + G ++ H+ P Sbjct: 1 MRRILTTLMILLAVIVAGLTSLVLLVNPNDFRAYMVHEVAERSGYQLELDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS +++V + + + ++ V Sbjct: 61 LSILSGRMTLTARGAEEPVIRADNMRLDVALLPLLSHQLQVKQVMLKGAVIQLTPKTEAV 120 Query: 122 SNWFQ---------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + ++ D + + ++ V + E+ + + D+ LQ+ Sbjct: 121 RDSAAPVVPHDNTLPQAPEDRGWSYDVRQLQVAD-SVLFFQHENGEQVTVRDIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP + Sbjct: 180 ENHRAT-----------------------VDFSGRINRDQRDLALSFSATVQGGDYPHAL 216 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + + + G + + L +++ +R L Sbjct: 217 KADFS----------QLSWQLRGAELP---PDGINGQGSLQASWQEDGKTLRFDNLNL-- 261 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDD 350 S + V + + + D L + + + + Sbjct: 262 --MASGSTLTGNGSVVLGDRPDWSLDLHATTLNLDSLLAPSSPATDSSASQQGQSQTRPL 319 Query: 351 IQYSVNKKEEKDNSHDKENQENFSG 375 + E D ++ F+G Sbjct: 320 RPVIADSDER----EDYQSLRGFNG 340 >gi|153800930|ref|ZP_01955516.1| asmA protein [Vibrio cholerae MZO-3] gi|124123521|gb|EAY42264.1| asmA protein [Vibrio cholerae MZO-3] Length = 703 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 57/432 (13%), Positives = 126/432 (29%), Gaps = 56/432 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ I L L +++ + L ++ F+ QA G + ++G I P Sbjct: 1 MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL ++++ ++ +D + Sbjct: 61 IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120 Query: 120 GVSNWFQRKS-----------------------TMDMIHNVILEKIHVKGGRIKIIDQES 156 G SN ++ L + V ++I D+++ Sbjct: 121 GRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKA 180 Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197 L D+ L + + D + A+G Sbjct: 181 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 240 Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 N+ + K+ + +KA +L + A + ++ G+ Q I Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAAEMKLNAQGSASLMVNQAISKV 300 Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + L S K L +S L + N+ D K V Sbjct: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 358 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + + + F+ + E D +E + + + N E + Sbjct: 359 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSA 418 Query: 368 ENQENFSGDKMI 379 + +G+ I Sbjct: 419 LKALDVAGEISI 430 >gi|224371323|ref|YP_002605487.1| AsmA [Desulfobacterium autotrophicum HRM2] gi|223694040|gb|ACN17323.1| AsmA [Desulfobacterium autotrophicum HRM2] Length = 675 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 110/360 (30%), Gaps = 47/360 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ LI G +++L+ VP +D +R E Q + G+ + G + + + P+ Sbjct: 5 LKWSLIASGTFVALILLAILIVPRVVDVNSYRPQIEHQVSKATGRPFVLGGELDLSVFPW 64 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + ++ + E I+ +R + LPL S I+V +D P + ++ Sbjct: 65 MGLTLSNLTLGSPEGFDQKEFITIKRFEVRVKVLPLFSRTIQVKKFVVDTPQIFLVKNTT 124 Query: 120 GVSNWFQRKSTMDMIHN--------------------VILEKIHVKGGRIKIIDQESDQV 159 G +NW ++ + +++ ++ GRI D Sbjct: 125 GGTNWDMGQAQPPTPKQQPADKNTPAGEKAGALPFKALFVDEFAIQNGRIHYRDLGLKVT 184 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 +S++ L + L + +I G I L Sbjct: 185 KEISNVTLTLEDLNLEDPIKIKFSAIADGHPLSLNG--------LVGPIGKEPGRGMIPL 236 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN---- 275 I L L I + + G + P + ++ + L L L+ + Sbjct: 237 DITLKALDE-ITMKVKGGINDPITTPGFDLDLELSDFSPRKLLTALGNSTPILTADPRVL 295 Query: 276 --------FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 K G V +S L + + + L + D Sbjct: 296 EHLQLNLHLKGDPGAVTVSNGTL----ILDDSTLTFSARAKDFSKPDLGVDMVVDKINLD 351 >gi|15641052|ref|NP_230684.1| asmA protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587376|ref|ZP_01677146.1| asmA protein [Vibrio cholerae 2740-80] gi|153819382|ref|ZP_01972049.1| asmA protein [Vibrio cholerae NCTC 8457] gi|153822379|ref|ZP_01975046.1| asmA protein [Vibrio cholerae B33] gi|227081212|ref|YP_002809763.1| asmA protein [Vibrio cholerae M66-2] gi|254848168|ref|ZP_05237518.1| asmA protein [Vibrio cholerae MO10] gi|298498852|ref|ZP_07008659.1| asmA protein [Vibrio cholerae MAK 757] gi|9655503|gb|AAF94198.1| asmA protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548379|gb|EAX58441.1| asmA protein [Vibrio cholerae 2740-80] gi|126510063|gb|EAZ72657.1| asmA protein [Vibrio cholerae NCTC 8457] gi|126520086|gb|EAZ77309.1| asmA protein [Vibrio cholerae B33] gi|227009100|gb|ACP05312.1| asmA protein [Vibrio cholerae M66-2] gi|254843873|gb|EET22287.1| asmA protein [Vibrio cholerae MO10] gi|297543185|gb|EFH79235.1| asmA protein [Vibrio cholerae MAK 757] Length = 703 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 57/432 (13%), Positives = 126/432 (29%), Gaps = 56/432 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ I L L +++ + L ++ F+ QA G + ++G I P Sbjct: 1 MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL ++++ ++ +D + Sbjct: 61 IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120 Query: 120 GVSNWFQRKS-----------------------TMDMIHNVILEKIHVKGGRIKIIDQES 156 G SN ++ L + V ++I D+++ Sbjct: 121 GRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKA 180 Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197 L D+ L + + D + A+G Sbjct: 181 GSHTKLYDVQLSVAEFVPDNWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 240 Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 N+ + K+ + +KA +L + A + ++ G+ Q I Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAISKV 300 Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + L S K L +S L + N+ D K V Sbjct: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 358 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + + + F+ + E D +E + + + N E + Sbjct: 359 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSA 418 Query: 368 ENQENFSGDKMI 379 + +G+ I Sbjct: 419 LKALDVAGEISI 430 >gi|294635544|ref|ZP_06714024.1| protein AsmA [Edwardsiella tarda ATCC 23685] gi|291091113|gb|EFE23674.1| protein AsmA [Edwardsiella tarda ATCC 23685] Length = 600 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 51/382 (13%), Positives = 115/382 (30%), Gaps = 51/382 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+L L L VV G + L I+ DFR +Q G + + G ++ + P Sbjct: 1 MRRLLTTLMILLVVVTAGLSALLLLINPNDFRAYMVKQVQQRTGYTLTLDGDLRWRVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + PLLS ++ V + + + S+ Sbjct: 61 LSILTDHMSLRADGALQPLISADNMRLDVRLWPLLSHQLDVRQVMLKGAVIRLSPDSEPQ 120 Query: 122 SNWFQRKST-------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 S DM + ++K+ V+ + I + L D+ L + Sbjct: 121 QVASAPSSPVARSEAISDMAWRLNIQKVKVED-SLVIWQPPEGEPINLRDIQLSLDQNAQ 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 +F N ++ ++L+ + YP Sbjct: 180 R-----------------------QVALSFSSRINRDQRDLLVNLEASVDLRHYPQQY-- 214 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 + I + +G + A + S +++ + V +S L + Sbjct: 215 --------QAQISHFDYRYSGAGLPAAGI---AGQGSTSLSYQAAPATVTLSGLMLSA-- 261 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE-EEEKKNKNDDLKKDDIQY 353 + + + + + + D ++ + K D L Sbjct: 262 --NDSQLQGEIAATLGAHPDYRVTLRADKLNWD--ALSGWQGVDVAAAKEDALTSPPPSP 317 Query: 354 SVNKKEEKDNSHDKENQENFSG 375 +++ ++ +FS Sbjct: 318 VISQVSAPIADNNLPFLRDFSA 339 >gi|258621819|ref|ZP_05716850.1| asmA protein [Vibrio mimicus VM573] gi|258586050|gb|EEW10768.1| asmA protein [Vibrio mimicus VM573] Length = 704 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 49/380 (12%), Positives = 115/380 (30%), Gaps = 56/380 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ + L L V++ + L ++ F+ QA G + ++G I P Sbjct: 1 MKKLFLSLLGLVVVIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL ++++ ++++D + Sbjct: 61 IGFELGKTELKNPQGFQSANLFKVESVGIDVSVMPLLDKQLKIGNIHLDGAEFHLETLKD 120 Query: 120 GVSNWFQR-----------------------KSTMDMIHNVILEKIHVKGGRIKIIDQES 156 G SN S ++ L + V ++++D ++ Sbjct: 121 GRSNLDALTQAQSKQAAAPAATESTPTPEATSSEPTAAWSIELGGVSVSNAVLEMVDHKA 180 Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197 L D+ L + + + + A+G Sbjct: 181 GTQTKLYDVQLSVSEFMPDSWTKATFAAKGNKDQQKFAAQGDAEVRLSADFKQYALRNIN 240 Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 N+ + K+ + +KA +L + A + ++ G+ + I Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAKGSASLMVDKAISKV 300 Query: 250 VFS--VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + L S K L ++ L + N+ D K V Sbjct: 301 GLDGLKLEADLEGAALPQSPMKIGLDSQISFDLTKNHLNVL-LNKLTANA-LSFDGKADV 358 Query: 308 SQDEENLLNFSENGAESMHD 327 + + + F+ + E D Sbjct: 359 TLADIPKVRFNMHSPEIDLD 378 >gi|294503501|ref|YP_003567563.1| hypothetical protein YPZ3_1391 [Yersinia pestis Z176003] gi|262361544|gb|ACY58265.1| hypothetical protein YPD4_1357 [Yersinia pestis D106004] gi|262365717|gb|ACY62274.1| hypothetical protein YPD8_1591 [Yersinia pestis D182038] gi|294353960|gb|ADE64301.1| hypothetical protein YPZ3_1391 [Yersinia pestis Z176003] Length = 612 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 41/385 (10%), Positives = 111/385 (28%), Gaps = 58/385 (15%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68 L L V++ G + L ++ DFR +Q G + ++G ++ H+ P S+ Sbjct: 2 LVILLIVLVAGMSALVLLVNPNDFRAYMVKQVEKKSGYHLQLEGDLRWHVWPQLSIIAGR 61 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR- 127 + + E + + + PLLS ++ V + + + S+ Sbjct: 62 MALTAPGALEPVVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLTPDSEAQQQIDAPV 121 Query: 128 ---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + + + + ++ + + ++DQ + D+NL++ Sbjct: 122 APIAPAGSTPVSDNRGWTLDINRLQIADSLLIWQRSDNDQ-INVRDINLELK-------- 172 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 G + N ++ S+ I YP Sbjct: 173 ---------------QGGQRQVQVTLASRVNRNQRDLTFSMVIDADMHQYPRQFSAN--- 214 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 I + + G + L +++ + +++ + ++ Sbjct: 215 -------ISQFTYKLEGADIPAGGISGGG---ALEASYQSDIQQLLLNQLNFTA----NN 260 Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV--- 355 K + + + D F + K + + + Sbjct: 261 NQLAGSVKATFGDVPDYVVNLTSDNLNLD----AIFGWQPKSSTASTDEAKQPVTTAPVI 316 Query: 356 NKKEEKDNSHDKENQENFSGDKMIL 380 + + D + + +F+ ++ Sbjct: 317 AIQIDDDVGQNLQALRDFTAQTTVV 341 >gi|229515421|ref|ZP_04404880.1| AsmA protein [Vibrio cholerae TMA 21] gi|229347190|gb|EEO12150.1| AsmA protein [Vibrio cholerae TMA 21] Length = 749 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 59/432 (13%), Positives = 128/432 (29%), Gaps = 56/432 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ I L L +++ + L ++ F+ QA G + ++G I P Sbjct: 47 MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 106 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL ++++ ++ +D + Sbjct: 107 IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 166 Query: 120 GVSNWFQRKS-----------------------TMDMIHNVILEKIHVKGGRIKIIDQES 156 G SN ++ L + V ++I D+++ Sbjct: 167 GRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPTAAWSIELGGVSVSNAVLEITDKKA 226 Query: 157 DQVYFLSDLNLQI----SARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197 L D+ L + R+ D + A+G Sbjct: 227 GSHTKLYDVQLSVAEFAPDRWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 286 Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 N+ + K+ + +KA +L + A + ++ G+ Q I Sbjct: 287 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVSGKAADMKLNAQGSASLMVNQAISKV 346 Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + L S K L +S L + N+ D K V Sbjct: 347 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 404 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + + + F+ + E D +E + + + N E + Sbjct: 405 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPALAKEAAASSSSAPAANAPAEVEPDLSA 464 Query: 368 ENQENFSGDKMI 379 N + +G+ I Sbjct: 465 LNALDVAGEINI 476 >gi|157372979|ref|YP_001480968.1| AsmA family protein [Serratia proteamaculans 568] gi|157324743|gb|ABV43840.1| AsmA family protein [Serratia proteamaculans 568] Length = 678 Score = 145 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 41/408 (10%), Positives = 116/408 (28%), Gaps = 43/408 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 + +G + +++ L DW + + + + + A++G + + Sbjct: 6 KAFTWVGGIVLLIIAALVVFVLTFDWNRLKPTINDKVSAELHRPFAIRGDLGVDWSRDDK 65 Query: 57 ------HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P+P + +D+ + + G +++ + L LL ++ + +++ Sbjct: 66 DIGGWRAWVPWPRIHAEDVVLGNPKNIPGDSMVQLQRVEASISPLALLGKQLLIPRIWLK 125 Query: 109 QPHLNFYLSSKGVSNWFQ----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 QP+ + + G +NW + +V + I G+I D + + Sbjct: 126 QPNASLQRLANGENNWTFNLAGDPNQPPSAWSVNIHDIVFDRGQIAFKDATLKADFRA-E 184 Query: 165 LNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKNKAIS 218 ++ + ++ + G ++ + + +N + Sbjct: 185 IDPLGKPLPFSEVTGKKDAGTTIPQDYIFGWKVKGKYNGEPLSGSGKIGGMLSLQNAEVP 244 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR------- 271 +Q + + + G L +GD L Sbjct: 245 FPLQADVRSGSTRVVVAGTLSDPMNLGGLDLRLKFSGDSLGNLYALTGVLLPNTPPYSTD 304 Query: 272 --LSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328 L+ G V + ++ + + D V+ L+ + Sbjct: 305 GHLTARLHEKGGAVFQYQKFDGKIGDSDIHGDLK---YVAGKPRPTLSGEVLSKQLRF-- 359 Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376 D + + + K D ++ + + D Sbjct: 360 --ADLAPLIGADSNTQKAGRGEKSRQPAGKVLPVEKFDTKSWKVMNAD 405 >gi|254419932|ref|ZP_05033656.1| AsmA family [Brevundimonas sp. BAL3] gi|196186109|gb|EDX81085.1| AsmA family [Brevundimonas sp. BAL3] Length = 643 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 41/338 (12%), Positives = 98/338 (28%), Gaps = 31/338 (9%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66 G + +++ + DW R R A+ + IA++G + +H+ + PS Sbjct: 14 WAGGVGLLLIGIVVLALILFDWNMVRGPIGRWASAAYDRDIALQGDLDVHLFSWTPSAVV 73 Query: 67 KDIRIDQKEDGSFE--SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124 + ++I E + ++ + L +G+I + + +P L G ++W Sbjct: 74 RGLKIGGPEWARDRDTADVDEIRASVRLRKLFAGQIEMPLLSFTRPRLVLITDKDGRNSW 133 Query: 125 FQRKSTMDMIHNVI---LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 D + ++++ + GR+ ++ + + Sbjct: 134 DLNPEKPDTGEGMKLPVIQQLVITDGRLVFDERRRGLKLEAT-------------VDARE 180 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240 + +G G + ++ + + + G + Sbjct: 181 GQGDDAGFVLDGEGEVNGSPLTLRVRGGPFINIRRDRPYDFEASVSGAGSSLTAKGAVTR 240 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + S+ G L L RL G K ++ S + + Sbjct: 241 PFDLGRFDATLSLQGRDLSDLYLLTGVALPNTPPYRLKGALKRNENIWTFSDFDGRVGAS 300 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 + S V D L D+++ Sbjct: 301 DLS------GDVRVDAAKRLRVDAELTSRRLDIDDLAA 332 >gi|238895636|ref|YP_002920371.1| putative assembly protein [Klebsiella pneumoniae NTUH-K2044] gi|57753908|dbj|BAD86763.1| srppressor of ompF assembly mutants [Klebsiella pneumoniae] gi|238547953|dbj|BAH64304.1| suppressor of ompF assembly mutants [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 615 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 41/335 (12%), Positives = 107/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+L L L +V++ G ++ L ++ DFR + G ++ + G ++ H+ P Sbjct: 1 MRRILTTLMILLAVIVAGLTSLVLLVNPNDFRAYMVHEVAERSGYQLDLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS +++V ++ + + ++ V Sbjct: 61 LSILSGRMTLTARGAEEPVIRADNMRLDVALLPLLSHQLQVKEVMLKGAVIQLTPKTEAV 120 Query: 122 ---------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + ++ V + E+ + + D+ LQ+ Sbjct: 121 RDSSAPVVPHDNTLPLAPEDRGWSYDVRQLQVAD-SVLFFQHENGEQVTVRDIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A++ + YP + Sbjct: 180 ENHRAT-----------------------VDFSGRVNRDQRDLALNFSATVQGGDYPHSL 216 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + + G + + L +++ D +R L Sbjct: 217 KADFT----------QLSWQLRGAELP---PDGINGQGSLQASWQEDDKTLRFDNLNL-- 261 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + V + + + D Sbjct: 262 --MANRSTVTGSGSVVLGDRPDWSLDLHATTLDLD 294 >gi|71736320|ref|YP_276610.1| AsmA family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556873|gb|AAZ36084.1| AsmA family protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 723 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 47/381 (12%), Positives = 101/381 (26%), Gaps = 45/381 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G VVL V + DW + + + + + A+ G + + Sbjct: 40 RKIFAWTGATLLVVLAILVIVLVTFDWNRIKPTLNEKVSEALHRPFAINGDLDVRWTREP 99 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + E ++ + R LPLL+ ++ + + + Sbjct: 100 ELGGWRAWVPSPHFVADDLTLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 159 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + V + I G + DQ + + Sbjct: 160 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVVDIGAIKFDKGLVSFNDQTLNANLDVV 219 Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212 ++L + I + TG + ++ + Sbjct: 220 -IDLLGKPIPFSEIVGSKEAQKAQEKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLAL 278 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270 K+ + +Q + G L + ++G L Sbjct: 279 KDASQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 338 Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321 G + N R + + + D V+ L+ + Sbjct: 339 PAYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSN 395 Query: 322 AESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 396 QLLFSDLAPLIGADSNAAQKK 416 >gi|310768044|gb|ADP12994.1| putative assembly protein [Erwinia sp. Ejp617] Length = 615 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 47/390 (12%), Positives = 112/390 (28%), Gaps = 54/390 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R + L L VV+ G + + ++ DFR RQ G +A+ G ++ H+ P Sbjct: 1 MKRFITTLAILLVVVVAGMTALVMLVNPNDFRAYMVRQVEQRSGYHLALNGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + LPL S ++ V + + + SK + Sbjct: 61 LSILSGPVTLTAPGARQPVVSAANMRLDVNLLPLFSHQLSVKQVMLKGAVIRLTPDSKSL 120 Query: 122 S-----------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + F + + + + G + Q + + + DL+L + Sbjct: 121 PPVNAPIGPAGSSTFSPTDDVARGWKFDISHLRIADGLLVW-QQSTGEQLNVRDLSLALD 179 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 N + + L +L YP Sbjct: 180 QNQPR-----------------------QVHIEISSRINRDQRELQLDLSSELDITDYPQ 216 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 + + + + G L ++ A ++ N++ G + L Sbjct: 217 RVK----------AIVQQLDYQLKGADLLLAGIQGKA---QMKANWESLTGRFSLEDIHL 263 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKK 348 + + + + L + + D L + +++ + Sbjct: 264 SA----NDSQLSGTLSGTLGAHPELLANLHIGSIDLDSLLGLSGAMDQDALATEPRSGHA 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKM 378 I + + Q + D++ Sbjct: 320 PVIASVPVTDNVHSVLNALDGQLTLAVDQL 349 >gi|153824948|ref|ZP_01977615.1| asmA protein [Vibrio cholerae MZO-2] gi|149741460|gb|EDM55490.1| asmA protein [Vibrio cholerae MZO-2] Length = 703 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 58/432 (13%), Positives = 128/432 (29%), Gaps = 56/432 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ + L L V++ + L ++ F+ QA G + ++G I P Sbjct: 1 MKKLFLSLLGLVVVIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K++ + + +PL ++++ ++ +D + Sbjct: 61 IGFELGKTELKNPQGFASPNLFKVDSVGIDVSVMPLFDKQLKIGNIRLDGAEFHLETLKD 120 Query: 120 GVSNWF-----------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQES 156 G SN S ++ L + V ++I D+++ Sbjct: 121 GRSNLDALTQVQSKPAATPAATESAPTSQPGSSEPAAAWSIELGGVSVSNAVLEITDKKA 180 Query: 157 DQVYFLSDLNLQISAR----FLNIISPLSIDSIKGSVIAEGTGNF--------------- 197 L D+ L +S + D + A+G Sbjct: 181 GSHTKLYDVQLSVSEFAPESWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 240 Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 N+ + K+ + +KA +L + A + ++ G+ Q I Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMQLNAQGSASLMVNQAISKV 300 Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + L S K L +S L + N+ D K V Sbjct: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 358 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + + + F+ + E D +E + + + N E + Sbjct: 359 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPAANAPAEVEPDLSA 418 Query: 368 ENQENFSGDKMI 379 N + +G+ I Sbjct: 419 LNALDVAGEISI 430 >gi|218662192|ref|ZP_03518122.1| hypothetical protein RetlI_23310 [Rhizobium etli IE4771] Length = 187 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 106/197 (53%), Gaps = 11/197 (5%) Query: 13 FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID 72 V L A PLFIDWTDFR++FE QA+ I+GKK+ V G + +LPFPSV D+R+ Sbjct: 2 IVVALFVALLAPLFIDWTDFRKNFEDQASRIIGKKVTVHGTVDARLLPFPSVTLHDVRVG 61 Query: 73 QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMD 132 Q+ DG+ K+E SM AE P LSGE +FDM + P + L G +W + Sbjct: 62 QEADGTPIVKVEQFSMDAELAPFLSGEALIFDMRVVNPKVRLRLLKDGTLDWMRGSRAEI 121 Query: 133 MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE 192 V+LE +HV GG ++ ID +S + ++ LN ++SA+ S+ G E Sbjct: 122 PAKTVVLENVHVSGGEVEFIDDQSGRARRITGLNAEMSAK-----------SLAGPWRIE 170 Query: 193 GTGNFDNKRSAFKITAN 209 G D + F I+++ Sbjct: 171 GDAALDGEHGNFSISSS 187 >gi|154252885|ref|YP_001413709.1| AsmA family protein [Parvibaculum lavamentivorans DS-1] gi|154156835|gb|ABS64052.1| AsmA family protein [Parvibaculum lavamentivorans DS-1] Length = 1146 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 113/339 (33%), Gaps = 28/339 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + +L + L V+L A P +DW FR + E QA+ + +++ G I+ ILP Sbjct: 1 MNSILTYIAGLLVVLLFAALVGPSLVDWNQFRTEIETQASQAAARPVSIDGDIRFRILPA 60 Query: 62 PSVFFKDIRIDQKEDG------SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 P + I+I D + E + PLLSG+I++ + I +P +N Sbjct: 61 PHLTLGKIKIGNDPDASSLPSDPHFATFEEIDAEMALAPLLSGDIQITSVRIVRPQINLE 120 Query: 116 LSSKGVSNW-------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 + G NW K M + ++ LEK + G + ++ + + + + Sbjct: 121 VLPDGSVNWRGLNVASRIPKEGMFSLASISLEKASFENGTVNYRNRVNGRRWKAQQVQ-- 178 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 + S+ G + +E + AF+I A +KA + ++ L + Sbjct: 179 ---------GSVIATSLLGPLRSEFEATIGDVPLAFRIGMGNFAGDKAFRVTTEMRTLDH 229 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 P+ G G + R+ ++ + Sbjct: 230 PVKFLFSGVATDFSLAARLDGNGRLEVGAETDREDGTKTSPIRVDAGMVLNARRASLRNL 289 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + + ++ + D Sbjct: 290 SVVA----DGAALRGSAEARWEQRPSMTLRLTAESFSLD 324 >gi|270486800|ref|ZP_06203874.1| AsmA family protein [Yersinia pestis KIM D27] gi|270335304|gb|EFA46081.1| AsmA family protein [Yersinia pestis KIM D27] Length = 450 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 40/385 (10%), Positives = 110/385 (28%), Gaps = 58/385 (15%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68 L L V++ G + L ++ DFR +Q G + ++G ++ H+ P S+ Sbjct: 2 LVILLIVLVAGMSALVLLVNPNDFRAYMVKQVEKKSGYHLQLEGDLRWHVWPQLSIIAGR 61 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR- 127 + + E + + + PLLS ++ V + + + S+ Sbjct: 62 MALTAPGALEPVVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLTPDSEAQQQIDAPV 121 Query: 128 ---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + + + + ++ + + ++DQ + D+NL++ Sbjct: 122 APIAPAGSTPVSDNRGWTLDINRLQIADSLLIWQRSDNDQ-INVRDINLELKQGGQR--- 177 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 + N ++ S+ I YP Sbjct: 178 --------------------QVQVTLASRVNRNQRDLTFSMVIDADMHQYPRQFSAN--- 214 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 I + + G + L +++ + +++ + ++ Sbjct: 215 -------ISQFTYKLEGADIPAGGISGGG---ALEASYQSDIQQLLLNQLNFTA----NN 260 Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV--- 355 K + + + D F + K + + + Sbjct: 261 NQLAGSVKATFGDVPDYVVNLTSDNLNLD----AIFGWQPKSSTASTDEAKQPVTTAPVI 316 Query: 356 NKKEEKDNSHDKENQENFSGDKMIL 380 + + D + + +F+ ++ Sbjct: 317 AIQIDDDVGQNLQALRDFTAQTTVV 341 >gi|134096570|ref|YP_001101645.1| putative signal peptide [Herminiimonas arsenicoxydans] gi|133740473|emb|CAL63524.1| protein involved in outer membrane biogenesis asmA [Herminiimonas arsenicoxydans] Length = 673 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 98/324 (30%), Gaps = 36/324 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 +++++ S +L L DW R + G+ A+ G + + Sbjct: 5 KKIMLWSAIGSSALLFACVIFLLAFDWNHARPWINTHVSAATGRDFAINGDLALTWQRPQ 64 Query: 58 --------ILPFPSVFFKDIRIDQKED---GSFESKIEGLSMRAEFLPLLSGEIRVFDMY 106 +P P + D+ + + G ++ ++ LPLL+ I + + Sbjct: 65 VSTGTWRDWVPVPRLSAHDVSLSNPDWSRSGPNMVEVGHITFSVNPLPLLNKTIVIPTLQ 124 Query: 107 IDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 +D P + G +NW ++ + L+ + G + + D+ + Sbjct: 125 LDDPIVKLERLRDGRNNWTFTQNAP-SAWTLDLQGLLFYKGEVSLKDE----------IK 173 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 + ++ + P + + GT N K A K+ +Q Sbjct: 174 HIDAKASIDTLQPSAANDFVMDWKLSGTFNGARISGDGKAGALLALKSVDKPFPLQARLN 233 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFK 277 I + G++ + ++G L + L+G Sbjct: 234 VGKTSIRVKGSVTKPQDLAAIDMQLHLSGASMADLYPLTGITLPKTPEFSTEGHLTGTTN 293 Query: 278 ISDGNVRISRYKLQSILPNSSTDE 301 G +++ + + S Sbjct: 294 ALGGKWTYDKFRGKVGESDISGTL 317 >gi|262171950|ref|ZP_06039628.1| AsmA protein [Vibrio mimicus MB-451] gi|261893026|gb|EEY39012.1| AsmA protein [Vibrio mimicus MB-451] Length = 704 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 49/380 (12%), Positives = 114/380 (30%), Gaps = 56/380 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ + L L V++ + L ++ F+ QA G + ++G I P Sbjct: 1 MKKLFLSLLGLVVVIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL ++++ ++++D + Sbjct: 61 IGFELGKTELKNPQGFQSANLFKVESVGIDVSVMPLLDKQLKIGNIHLDGAEFHLETLKD 120 Query: 120 GVSNWFQRKSTMD-----------------------MIHNVILEKIHVKGGRIKIIDQES 156 G SN ++ L + V ++I+D ++ Sbjct: 121 GRSNLDALTQAQSKQAAAPAATESTPTPETTSSEPTAAWSIELGGVSVSNAVLEIVDHKA 180 Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197 L D+ L + + + + A+G Sbjct: 181 GTQTKLYDVQLSVSEFMPDSWTKATFAAKGNKDQQKFAAQGDAEVRLSADFKQYALRNIN 240 Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 N+ + K+ + +KA +L + A + ++ G+ + I Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAKGSASLMVDKAISKV 300 Query: 250 VFS--VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + L S K L ++ L + N+ D K V Sbjct: 301 GLEGLKLEADLEGAALPQSPMKIGLDSQISFDLTKSHLNVL-LNKLTANA-LSFDGKADV 358 Query: 308 SQDEENLLNFSENGAESMHD 327 + + + F+ + E D Sbjct: 359 TLADIPKVRFNVHSPEIDLD 378 >gi|332533205|ref|ZP_08409072.1| protein AsmA [Pseudoalteromonas haloplanktis ANT/505] gi|332037284|gb|EGI73739.1| protein AsmA [Pseudoalteromonas haloplanktis ANT/505] Length = 656 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 56/352 (15%), Positives = 134/352 (38%), Gaps = 38/352 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ +L +G + + + P I Q G+ + +KG + + P Sbjct: 1 MKTLLKIVGVILLLCIALIVAAPFLIPTDTIFNKVSEQVEQTTGRTLTIKGDKTLSVFPA 60 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + D+ E GS + ++ L++ + L GE ++ I++P++ Sbjct: 61 LKLELNDVHFANMESGSRADMASMKQLAVHIPWFSLFGGEFKLDKFVINEPNILLETDKN 120 Query: 120 GVSNWFQRKSTMDMI---------------HNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 G +NW + + ++ L ++ + GG +D ++ +SD Sbjct: 121 GKANWQLFDAVAEQPKEQSQPGEAIKLPDNFDIELGEVAIYGGTFTYLDGQTGAKQQVSD 180 Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 L L I + S++ ++ +G + +R I + PAK + + Sbjct: 181 LELAI-----------LLPSLRKTLEVKGGITYMQERFDLDIKLDTPAKAIEGA-TFNVK 228 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS----KLLNLELSAKKSRLSGNFKISD 280 ++DL ++ G +++G+ K +EL AK + +G F ++ Sbjct: 229 QTLDSRLVDLTFEGSIAKQGQDIKGQLALSGESVKSIAKWQGVELDAKDNAFNG-FSVNG 287 Query: 281 G-NVRISRYKLQSILPN-SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330 ++ ++ L+ ++ + + K++++ + L + + M DLN Sbjct: 288 KMHLLGEKFNLEDLVATLDALEIKGKSELNLGK--RLAVNADIDLGMLDLNP 337 >gi|152972383|ref|YP_001337529.1| hypothetical protein KPN_03875 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150957232|gb|ABR79262.1| hypothetical protein KPN_03875 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 683 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 49/406 (12%), Positives = 108/406 (26%), Gaps = 45/406 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56 R+ L+ + +++V F V DW + ++ + + + A++G + + Sbjct: 5 RKTLVIITGTILLLIVLFFIVLATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQP 64 Query: 57 ------HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P+P V +DI + + + L LLS + + + ++ Sbjct: 65 DERGWRSWIPWPHVHAEDIVLGNPPAIPQVTMIHLPRVEATLAPLALLSKTVYLPWIKLE 124 Query: 109 QPHLNFYLSSKGVSNWFQR--------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 QP + ++ +NW + + + L+ I G I I D+ + Sbjct: 125 QPDVRLIRLAEDNNNWTFQLAGDKRTSGDSAPSSWSFRLDNILFDRGTIAIDDKITRSDI 184 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKN 214 + L F + S G + + ++ Sbjct: 185 TILVDPLGKPLPFSEVTGTKDRHSAAKPGDYVFGLSLKGRYKGQPVTGNGKIGGMLALRS 244 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270 + +Q + + G + AGD + L Sbjct: 245 ASAPFPLQGDFHSGNTRVAFSGTVSDPLNVGGIDLRLKFAGDSLRDLYDLTGVLLPETPS 304 Query: 271 -----RLSGNFKISDG-NVRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAE 323 RL +F + + + + + L+ + Sbjct: 305 FSTDGRLRADFTQKNRMRFNYQNFNGRIGDSD----IHGSLTYTTGKPRPKLSGDMESKQ 360 Query: 324 SMH-DLNET-DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 DL + K D Q + DK Sbjct: 361 LRLADLGPLIGVDSGKGTKKSASRQAGDRPQPAGKVLPADRFETDK 406 >gi|330001968|ref|ZP_08304140.1| AsmA family protein [Klebsiella sp. MS 92-3] gi|328537517|gb|EGF63746.1| AsmA family protein [Klebsiella sp. MS 92-3] Length = 615 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 41/335 (12%), Positives = 106/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+L L L +V++ G ++ L ++ DFR + G ++ + G ++ H+ P Sbjct: 1 MRRILTTLMILLAVIVAGLTSLVLLVNPNDFRAYMVHEVAERSGYQLDLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS +++V + + + ++ V Sbjct: 61 LSILSGRMTLTARGAEEPVIRADNMRLDVALLPLLSHQLQVKQVMLKGAVIQLTPKTEAV 120 Query: 122 ---------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + ++ V + E+ + + D+ LQ+ Sbjct: 121 RDSSAPVVPHDNTLPLAQEDRGWSYDVRQLQVAD-SVLFFQHENGEQVTVRDIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A++ + YP + Sbjct: 180 ENHRAT-----------------------VDFSGRVNRDQRDLALNFSATVQGGDYPHSL 216 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + + G + + L +++ D +R L Sbjct: 217 KADFT----------QLSWQLRGAELP---PDGINGQGSLQASWQEDDKTLRFDNLNL-- 261 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + V + + + D Sbjct: 262 --MANRSTVTGSGSVVLGDRPDWSLDLHATTLDLD 294 >gi|197104603|ref|YP_002129980.1| AsmA family membrane protein [Phenylobacterium zucineum HLK1] gi|196478023|gb|ACG77551.1| AsmA family membrane protein [Phenylobacterium zucineum HLK1] Length = 634 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 45/316 (14%), Positives = 90/316 (28%), Gaps = 27/316 (8%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDG--SF 79 + DW FR ER A+ + +++++ G + + + + P + +RI Sbjct: 2 LVAIWDWNWFRGPVERIASARLNREVSIAGDLDVRLWSWQPRATVEGVRIANAPWAGRDP 61 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV-I 138 E ++++ +PLL G + + + D+P L Y ++G NW + Sbjct: 62 LGTFEKITVQIRLVPLLWGNVDLRLLRFDRPELRLYADARGRRNWDFSDGRKKEPMRLPP 121 Query: 139 LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD 198 + V GR+ +D + DL + + + S G G + Sbjct: 122 IRSFIVADGRMSYLDVK-------RDLRFEGTINAAETLGDRSRG-----FELVGQGTIN 169 Query: 199 NKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257 + ++T + A I G + + + G Sbjct: 170 RQPFRMEVTGGPLVNIERDRPYPFNAEIRAGRTYITANGAVPKPFDLGRFHMFTTARGPD 229 Query: 258 SKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD-E 311 L L G + RI + + KV Sbjct: 230 LSDLYPLTGVALPNTPPYSLRGRLSRDELVWRIDNLGGRVGDSD----LAGDIKVETGRT 285 Query: 312 ENLLNFSENGAESMHD 327 + D Sbjct: 286 RPMFEADLRSRSLDFD 301 >gi|114799535|ref|YP_760141.1| AsmA family protein [Hyphomonas neptunium ATCC 15444] gi|114739709|gb|ABI77834.1| AsmA family protein [Hyphomonas neptunium ATCC 15444] Length = 947 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 63/346 (18%), Positives = 118/346 (34%), Gaps = 35/346 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R + G + +++LVG TVP + +R ER AT + ++I + G +KI I P Sbjct: 3 IKRAGLIAGGIVALLLVGLVTVPFLVPKEVYRAQIERAATQALQRQITLTGDVKISIFPS 62 Query: 62 PSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + E G + + L +PLLS + V ++ ++ + Sbjct: 63 IAASVGGVTVANPEGFDGPYMVEAGELRGSVRLMPLLSRRVEVKELAFVDARVSLQKLAN 122 Query: 120 GVSNWFQRKSTMDMIHNVI-----------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 G +NW + +E+ ++ + D E+ + Y L DL+L Sbjct: 123 GQTNWVFTPAEPTQPAPTRPAGEQKGFNGGVEQARLENASLTYRDGETGEYYELRDLDLL 182 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF-PAKNKAISLKIQLFPLA 227 S+ S + G F T + A K + I+ Sbjct: 183 -----------ASMASTDEPFRLKAKGFFQAHAFEINSTVDTIDALTKELPADIKADLDT 231 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA---------KKSRLSGNFKI 278 + G++ P+ SG F + D L A K L G+ + Sbjct: 232 TFGKVHYAGSVKL-GTIPVISGQFRASSDSLPQLAALTGADVPFDLSKLGKINLEGSLEG 290 Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 +R+ KL + T + +S+ S + Sbjct: 291 PANALRVDIEKLTQTSDLARTSFAGQLNLSETPTISGELSLDAPSL 336 >gi|238896973|ref|YP_002921718.1| hypothetical protein KP1_5215 [Klebsiella pneumoniae NTUH-K2044] gi|238549300|dbj|BAH65651.1| hypothetical protein KP1_5215 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 683 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 49/406 (12%), Positives = 108/406 (26%), Gaps = 45/406 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56 R+ L+ + +++V F V DW + ++ + + + A++G + + Sbjct: 5 RKTLVIITGTILLLIVLFFIVLATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQP 64 Query: 57 ------HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P+P V +DI + + + L LLS + + + ++ Sbjct: 65 DERGWRSWIPWPHVHAEDIVLGNPPAIPQVTMIHLPRVEATLAPLALLSKTVYLPWIKLE 124 Query: 109 QPHLNFYLSSKGVSNWFQR--------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 QP + ++ +NW + + + L+ I G I I D+ + Sbjct: 125 QPDVRLIRLAEDNNNWTFQLAGDKRASGDSAPSSWSFRLDNILFDRGTIAIDDKITRSDI 184 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKN 214 + L F + S G + + ++ Sbjct: 185 TILVDPLGKPLPFSEVTGTKDRHSAAKPGDYVFGLSLKGRYKGQPVTGNGKIGGMLALRS 244 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270 + +Q + + G + AGD + L Sbjct: 245 ASAPFPLQGDFHSGNTRVAFSGTVSDPLNVGGIDLRLKFAGDSLRDLYDLTGVLLPETPS 304 Query: 271 -----RLSGNFKISDG-NVRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAE 323 RL +F + + + + + L+ + Sbjct: 305 FSTDGRLRADFTQKNRMRFNYQNFNGRIGDSD----IHGSLTYTTGKPRPKLSGDMESKQ 360 Query: 324 SMH-DLNET-DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 DL + K D Q + DK Sbjct: 361 LRLADLGPLIGVDSGKGTKKSASRQAGDRPQPAGKVLPADRFETDK 406 >gi|330892480|gb|EGH25141.1| AsmA family protein [Pseudomonas syringae pv. mori str. 301020] Length = 451 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 102/381 (26%), Gaps = 45/381 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G VVL V + DW + +A+ + + A+ G + + Sbjct: 5 RKIFAWTGATLLVVLAILVIVLVTFDWNRIKPTLNEKASEALHRPFAINGDLDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + E ++ + R LPLL+ ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLTLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + V + I G + DQ + + Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVVDIGAIKFDKGLVSFNDQTLNANLDVV 184 Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212 ++L + I + TG + ++ + Sbjct: 185 -IDLLGKPIPFSEIVGSKEAQKAQEKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLAL 243 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270 K+ + +Q + G L + ++G L Sbjct: 244 KDASQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303 Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321 G + N R + + + D VS L+ + Sbjct: 304 PAYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYVSSQPRPKLSGVLVSN 360 Query: 322 AESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381 >gi|329999260|ref|ZP_08303391.1| AsmA family protein [Klebsiella sp. MS 92-3] gi|328538362|gb|EGF64495.1| AsmA family protein [Klebsiella sp. MS 92-3] Length = 643 Score = 143 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 49/406 (12%), Positives = 108/406 (26%), Gaps = 45/406 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56 R+ L+ + +++V F V DW + ++ + + + A++G + + Sbjct: 5 RKTLVIITGTILLLIVLFFIVLATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQP 64 Query: 57 ------HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P+P V +DI + + + L LLS + + + ++ Sbjct: 65 DERGWRSWIPWPHVHAEDIVLGNPPAIPQVTMIHLPRVEATLAPLALLSKTVYLPWIKLE 124 Query: 109 QPHLNFYLSSKGVSNWFQR--------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 QP + ++ +NW + + + L+ I G I I D+ + Sbjct: 125 QPDVRLIRLAEDNNNWTFQLAGDKRTSGDSAPSSWSFRLDNILFDRGTIAIDDKITRSDI 184 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKN 214 + L F + S G + + ++ Sbjct: 185 TILVDPLGKPLPFSEVTGTKDRHSAAKPGDYVFGLSLKGRYKGQPVTGNGKIGGMLALRS 244 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270 + +Q + + G + AGD + L Sbjct: 245 ASAPFPLQGDFHSGNTRVAFSGTVSDPLNVGGIDLRLKFAGDSLRDLYDLTGVLLPETPS 304 Query: 271 -----RLSGNFKISDG-NVRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAE 323 RL +F + + + + + L+ + Sbjct: 305 FSTDGRLRADFTQKNRMRFNYQNFNGRIGDSD----IHGSLSYTTGKPRPKLSGDMESKQ 360 Query: 324 SMH-DLNET-DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 DL + K D Q + DK Sbjct: 361 LRLADLGPLIGVDSGKGTKKSASRQAGDRPQPAGKVLPADRFETDK 406 >gi|302189363|ref|ZP_07266036.1| AsmA [Pseudomonas syringae pv. syringae 642] Length = 688 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 46/381 (12%), Positives = 103/381 (27%), Gaps = 45/381 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G VVL V + DW + + + + + A+ G + + Sbjct: 5 RKIFAWTGATLLVVLAILVIVIVTFDWNRIKPTLNEKVSEALHRPFAINGDLDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + E ++ + R LPLL+ ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLSLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + + + I G + DQ+ + + Sbjct: 125 GPEARLERLADGRANWVFDLPKSDPNAEPSKWVMDIGAIKFDKGLVSFNDQKLNANLDVV 184 Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212 ++L + I+ + TG + ++ + Sbjct: 185 -IDLLGKPIPFSEIAGSKEAKKAQDKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLAL 243 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270 K+ + +Q + G L + ++G L Sbjct: 244 KDSSQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303 Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321 G + N R + + + D V+ L+ + Sbjct: 304 PAYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GFVASQPRPKLSGVLVSN 360 Query: 322 AESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381 >gi|291618061|ref|YP_003520803.1| AsmA [Pantoea ananatis LMG 20103] gi|291153091|gb|ADD77675.1| AsmA [Pantoea ananatis LMG 20103] Length = 608 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 99/333 (29%), Gaps = 47/333 (14%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M+RRV+ L L VV+ G + + ++ DFR +Q G ++ + G ++ H+ P Sbjct: 1 MMRRVITTLAILLVVVVAGLTALVMLVNPNDFRSYMVQQVEQRSGYQLTINGDLRWHVWP 60 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 S+ + + + + + LPLLS ++ V + + + S Sbjct: 61 KLSILAGRMSLTAPGAAQPVVSADNMRLDVNLLPLLSHQLSVSQVMLKNAVVRVTPDSTA 120 Query: 121 VSNWFQR------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + + + K+ + + +LNL + Sbjct: 121 QVPQNAPRGPHNSEPASSDRWSFDIGKLQLMDSLFIWQQP-GGDAFTFRNLNLNMEQDQS 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 ++ + + + I+LK Q YP + Sbjct: 180 SLAT-----------------------INLSTSLTRNQRTAMINLKGQFDKSQYPHQLSG 216 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 ++++G ++ + GN+ V +S KL + Sbjct: 217 QLE----------QLDYALSGASLPPQGIKGTL---SFQGNWNGDRNTVALSDLKLNA-- 261 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + + L+ + D Sbjct: 262 --NDSVLSGSAQGDLTAPQKLSLDLHATSLNMD 292 >gi|283785884|ref|YP_003365749.1| outer membrane assembly protein [Citrobacter rodentium ICC168] gi|282949338|emb|CBG88949.1| putative outer membrane assembly protein [Citrobacter rodentium ICC168] Length = 616 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 40/335 (11%), Positives = 99/335 (29%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRSYMVQQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ Sbjct: 61 LSILSGRMALTAEGASEPLVRADNMRLDVALWPLLSHQLSVKQVMLKGAVIQLTPQTEAA 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E D+ + D+ L++ Sbjct: 121 RGEDAPVAPKDNNLPDVAEDRGWSFDIASLRVADSVLVF-QHEDDEQVTVRDIRLKMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ ++ + YP + Sbjct: 180 KQHRGT-----------------------FEFSGRINRDQRDLNLAFSGTVDASDYPHNL 216 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 I + + G ++ + + S+ L + Sbjct: 217 S----------AAISQLSWQLQGADLPKQGIQGQGQLQAQWQE---EQKTLSFSQLNLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + +V+ E+ N D Sbjct: 264 ----NDSTLTGSAQVALAEQPTWRIDLNFPRLNLD 294 >gi|323700177|ref|ZP_08112089.1| AsmA family protein [Desulfovibrio sp. ND132] gi|323460109|gb|EGB15974.1| AsmA family protein [Desulfovibrio desulfuricans ND132] Length = 686 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 123/359 (34%), Gaps = 44/359 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ LI +G L ++ + + L +D D++ + G+++ +G I + P+ Sbjct: 5 LKISLIVVGALAALFVTACIVLVLVVDPNDYKVQISQAVKDRTGRELKFEGDIGFNFFPW 64 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + + +I LPLLSG++ V + +D LN + + Sbjct: 65 LGLKVGPMALGNAPGFAPDEMVRINRAEASIRLLPLLSGDVAVGTVVLDGLTLNLARNKQ 124 Query: 120 GVSNWFQ-------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 G +NW + ++ +E + + G I D+++ Sbjct: 125 GATNWDDLAKGGEAGKAEAETATGSESPAESGSAPSLSVEGVEITGANIVYDDRQAGTRT 184 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 ++DL+L I A I + D+ + + A+ + Sbjct: 185 TVNDLSLIIGAVGDKIRF---------PFELKFRLKLDSPKVDTRPVLIGFARFDQEAGS 235 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQP---IYSGVFSVAGDFSKLLNLELSAKKS------- 270 I++ + + ++ L + + + +S +A + L +L Sbjct: 236 IEVDDMEFSLLNLKLTGLLFAKSKADDTSFSAELKLAPASVRELMKQLGLTPPETADPKV 295 Query: 271 --RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 LS + K++ + + + L T + V ++ + + N + D Sbjct: 296 LENLSADLKVNGSDTQATLESLTV--KLDQTLLTAEGAVKNFKKPAVTLNANVDDIDAD 352 >gi|66047676|ref|YP_237517.1| AsmA [Pseudomonas syringae pv. syringae B728a] gi|63258383|gb|AAY39479.1| AsmA [Pseudomonas syringae pv. syringae B728a] gi|330969728|gb|EGH69794.1| AsmA [Pseudomonas syringae pv. aceris str. M302273PT] Length = 688 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 45/381 (11%), Positives = 102/381 (26%), Gaps = 45/381 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G VVL V + DW + + + + + A+ G + + Sbjct: 5 RKIFAWTGATLLVVLAILVIVIVTFDWNRIKPTLNAKVSEALHRPFAINGDLDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + E ++ + R LPLL+ ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLSLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + + + I G + DQ+ + + Sbjct: 125 GPEARLERLADGRANWVFDLPKSDPNAEPSKWVMDIGAIKFDKGLVSFNDQKLNANLDVV 184 Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212 ++L + I + TG + ++ + Sbjct: 185 -IDLLGKPVPFSEIVGSKEAQKAQEKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLAL 243 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270 K+ + +Q + G L + ++G L Sbjct: 244 KDASQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303 Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321 G + + R + + + D V+ L+ + Sbjct: 304 PAYSTDGRLIAKLHDPAGASFRYEGFNGKIGNSDIHGDL---GFVASQPRPKLSGVLVSN 360 Query: 322 AESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381 >gi|330988208|gb|EGH86311.1| AsmA family protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 688 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 47/381 (12%), Positives = 101/381 (26%), Gaps = 45/381 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G VVL V + DW + + + + + A+ G + + Sbjct: 5 RKIFAWTGATLLVVLAILVIVLVTFDWNRIKPTLNEKVSEALHRPFAINGDLDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + E ++ + R LPLL+ ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLTLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + V + I G + DQ + + Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVVDIGAIKFDKGLVSFNDQTLNANLDVV 184 Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212 ++L + I + TG + ++ + Sbjct: 185 -IDLLGKPIPFSEIVGSKEAQKAQEKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLAL 243 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270 K+ + +Q + G L + ++G L Sbjct: 244 KDASQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303 Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321 G + N R + + + D V+ L+ + Sbjct: 304 PAYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSN 360 Query: 322 AESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381 >gi|298488902|ref|ZP_07006926.1| exported protein, conserved [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156577|gb|EFH97673.1| exported protein, conserved [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 688 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 47/381 (12%), Positives = 100/381 (26%), Gaps = 45/381 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G VVL V + DW + + + + + A+ G + + Sbjct: 5 RKIFAWTGATLLVVLAILVIVLVTFDWNRIKPTLNEKVSEALHRPFAINGDLDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + E ++ + R LPLL+ ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLTLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + V + I G + DQ + + Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVVDIGAIKFDKGLVSFNDQTLNANLDVV 184 Query: 164 DLNLQISARFLNIISPLSIDSIKGS---------VIAEGTGNFDNKRSAFKITAN--FPA 212 ++L + I TG + ++ + Sbjct: 185 -IDLLGKPIPFSEIVGSKEAQKAQKKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLAL 243 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270 K+ + +Q + G L + ++G L Sbjct: 244 KDASQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303 Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321 G + N R + + + D V+ L+ + Sbjct: 304 PAYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSN 360 Query: 322 AESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381 >gi|300717521|ref|YP_003742324.1| AsmA suppressor of OmpF assembly mutants [Erwinia billingiae Eb661] gi|299063357|emb|CAX60477.1| AsmA suppressor of OmpF assembly mutants [Erwinia billingiae Eb661] Length = 614 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 44/334 (13%), Positives = 93/334 (27%), Gaps = 49/334 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR + L L V++ G + L ++ DFR +Q G ++A+ G ++ H+ P Sbjct: 1 MRRFITTLAILLVVIVAGMTALVLLVNPNDFRGYMAQQVEQRSGYRLALNGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + LPL+S ++ V + + N S+ Sbjct: 61 LSILSGQMTLTAPGAKQPVVSASNMRLDVSLLPLISHQLSVKQVMLKGAVFNLTPDSEAQ 120 Query: 122 SNWFQRKSTMDM--------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 + ++ + + + + L DLNLQ+S Sbjct: 121 RPANAPVGPAGNNPDEGVTHGWKFDIAELRIADSLLIWQQD-NGEQLNLRDLNLQLSQDS 179 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 N + ++L L YP + Sbjct: 180 KR-----------------------QAHIELSSRINRDQRELLLNLNSDLDVSRYPQHLT 216 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 N + + G L+ ++ + + + L + Sbjct: 217 AAIN----------QLDYQMTGADLPKDGLKGQM---KMQAEWAGDNQAFSLKNLSLTA- 262 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + D LN + D Sbjct: 263 ---NDSQLDGSASGMLGARPQLNVDLHSPLLNMD 293 >gi|289629154|ref|ZP_06462108.1| AsmA family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647777|ref|ZP_06479120.1| AsmA family protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330869921|gb|EGH04630.1| AsmA family protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 688 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 47/381 (12%), Positives = 101/381 (26%), Gaps = 45/381 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G VVL V + DW + + + + + A+ G + + Sbjct: 5 RKIFAWTGATLLVVLAILVIVLVTFDWNRIKPTLNEKVSEALHRPFAINGDVDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + E ++ + R LPLL+ ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLTLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + V + I G + DQ + + Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVVDIGAIKFDKGLVSFNDQTLNANLDVV 184 Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212 ++L + I + TG + ++ + Sbjct: 185 -IDLLGKPIPFSEIVGSKEAQKAQEKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLAL 243 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270 K+ + +Q + G L + ++G L Sbjct: 244 KDASQPFPVQADVKVGDTHALIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303 Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321 G + N R + + + D V+ L+ + Sbjct: 304 PAYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSN 360 Query: 322 AESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381 >gi|283832513|ref|ZP_06352254.1| protein AsmA [Citrobacter youngae ATCC 29220] gi|291072179|gb|EFE10288.1| protein AsmA [Citrobacter youngae ATCC 29220] Length = 617 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 106/335 (31%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q + G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVKQVAVRSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + PLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMVLTAEGASEPLIRADNMRLDVALWPLLSHQLSVKQVMLKGAVIQLTPETEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + ++ V + E D+ + D++L++ Sbjct: 121 RGKDAPVAPKDNTLPDLAEDRGWSFDIARLRVADSVLVF-QHEDDEQVTVRDIHLEMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ A+S + YP + Sbjct: 180 NQHRGT-----------------------FDFSGRMNRDQRDLALSFNGTVDASDYPHNL 216 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + + G + + +L + + S+ L + Sbjct: 217 SANIE----------QLSWQLQGADLP---PQGIKGQGQLQAQWLEEKKQLAFSQIHLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + + +VS ++ + D Sbjct: 264 ----NDSSLAGQARVSLLDKPEWVADLKFGQLNLD 294 >gi|84394343|ref|ZP_00993065.1| AsmA protein [Vibrio splendidus 12B01] gi|84375036|gb|EAP91961.1| AsmA protein [Vibrio splendidus 12B01] Length = 708 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 56/383 (14%), Positives = 114/383 (29%), Gaps = 59/383 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++LI + VV+ + L ++ F+ QA G ++ ++G I P Sbjct: 1 MKKLLIFIAVPVFVVVAAILALVLLVNPNQFKPLIVEQAQKHTGLELVIEGDISWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + E K++ + + PL S ++ + ++ +D Sbjct: 61 IGFELGQTELRNPEGFTQPNLFKVDTVGVDVSVTPLFSNQLEIGNITLDGAEFYLETLKD 120 Query: 120 GVSNWFQ--------------------------RKSTMDMIHNVILEKIHVKGGRIKIID 153 G N + +T + L + V ++ D Sbjct: 121 GRKNIDALTQASAPQESEPVAGASSESTPAPQEQSATDASGWTINLAGVTVSNALFEMDD 180 Query: 154 QESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------- 202 +++ L D++L +S + S ++ + A G+ F Sbjct: 181 KQAGSFTKLYDVSLNLSEFAVDTWTTATFAASGENNQQKFSANGSAEFKLAEGFASYALR 240 Query: 203 ----------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 + KI N +K L + A + +DL G I Sbjct: 241 NIDLNAKFNDPATSIESAKIGLNTFEFDKVNQLTYAVIGNAAGLDLDLKGGGELTVDSAI 300 Query: 247 YSGVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 + S L S K + + +S + L+ + N+ D K Sbjct: 301 SKVTLNKLTLDSTFKGDTLPQSPMKVDMLSDLSFDLNKSHLS-FVLEKLQANA-IALDGK 358 Query: 305 TKVSQDEENLLNFSENGAESMHD 327 V+ E + FS + D Sbjct: 359 ADVTLSEIPKVRFSLHSPNIDLD 381 >gi|330943574|gb|EGH45911.1| AsmA [Pseudomonas syringae pv. pisi str. 1704B] Length = 688 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 44/380 (11%), Positives = 100/380 (26%), Gaps = 43/380 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G VVL V + DW + + + + + A+ G + + Sbjct: 5 RKIFAWTGATLLVVLAILVIVIVTFDWNRIKPTLNAKVSEALHRPFAINGDLDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + E ++ + R LPLL+ ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLSLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + + + I G + DQ+ + + Sbjct: 125 GPEARLERLADGRANWVFDLPKSDPNAEPSKWVMDIGAIKFDKGLVSFNDQKLNANLDVV 184 Query: 164 --------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAK 213 + + ++ + TG + ++ + K Sbjct: 185 IDLLGKPIPFSEIVGSKEAKKAQDKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLALK 244 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + +Q + G L + ++G L Sbjct: 245 DANQPFPVQADVKVGDTHALIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDSP 304 Query: 271 --RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENGA 322 G + N R + + + D V+ L+ + Sbjct: 305 AYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GFVASQPRPKLSGVLVSNQ 361 Query: 323 ESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 362 LLFSDLAPLIGADSNAAQKK 381 >gi|292491042|ref|YP_003526481.1| AsmA family protein [Nitrosococcus halophilus Nc4] gi|291579637|gb|ADE14094.1| AsmA family protein [Nitrosococcus halophilus Nc4] Length = 807 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 47/329 (14%), Positives = 105/329 (31%), Gaps = 22/329 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ + + ++++ A +P ID DF+ Q + G+++ + G I + + P+ Sbjct: 5 LKFLFSTFLVVILLIVIAAAVLPFIIDPNDFKPQITSQVKKVTGRELTLGGDIDLSLFPW 64 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V KD+ + +K + +R + LPL + + + + LN +++ Sbjct: 65 LGVALKDVSLSNPPSFEKASFAKAADMEVRVKLLPLFEKRVVMDTVVLRDLDLNLARNAQ 124 Query: 120 GVSNWFQRKSTMDM-----------------IHNVILEKIHVKGGRIKIIDQESDQVYFL 162 G +NW + I + + + ++ RI D+ D Y + Sbjct: 125 GKTNWEDLLAEKPQEAPPEAKPPEEEGTPPPIAGIAIAGLKIEAARIHWRDEVKDVRYTI 184 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 LNL + + G+ D + + LK+ Sbjct: 185 EQLNLATDPLVPGEPIQMELAFDFDLSEPAVHGHLDFGGEVMADLETNHYRLQDTDLKLT 244 Query: 223 LFPLAYP---IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 A P + + L N+ + + K + L G+ Sbjct: 245 AAGPALPIEQLALQLDANVDALLAKQQLTVSDLKLTSQVKGPQEAQLTLNTSLEGDLAAQ 304 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVS 308 + + + Q P + + + Sbjct: 305 RYRFQGLQLETQVKTPQFPEPLNARLATT 333 >gi|309780909|ref|ZP_07675648.1| AsmA family protein [Ralstonia sp. 5_7_47FAA] gi|308920212|gb|EFP65870.1| AsmA family protein [Ralstonia sp. 5_7_47FAA] Length = 761 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 58/409 (14%), Positives = 108/409 (26%), Gaps = 66/409 (16%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58 ++ +GL V++ A L DW R + + +G+ A+ G + + Sbjct: 6 KLALGLVITPVVIVAAAVIFVLTFDWNRARPYLNDRVSQAIGRPFAINGDLVLTWKKPEG 65 Query: 59 -------LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P DI + + + I L+ E LPLL+ I + + +D Sbjct: 66 ESGWRAYVPWPRFIANDITVGNPDWAKQPNVATIRQLTFVLEALPLLAHRIVIPSVTLDT 125 Query: 110 PHLNFYLSSKGVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQE-----SDQ 158 P + + +NW + + L +I G + + D + Sbjct: 126 PAIALERDKQNRNNWTFDLTRGEGNNKKPSDWKLDLREIAFSRGSLALDDDIKRIHLTAT 185 Query: 159 VYFLSDLNLQISARFLNIISP-----------------------LSIDSIKGSVIAEGTG 195 V + + L +A I S + G Sbjct: 186 VDTIDNQTLYTAANGTAIKSADQPAKEPAASGAAASATAAQTPAAPDPQQPYGIAWTVKG 245 Query: 196 NFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253 ++N A + + +Q IDL G L + Sbjct: 246 TYNNAAITGSGKAGGVLRLQDAQRPYPLQADVTVGKTRIDLAGTLTNPASLTAIDLRLHL 305 Query: 254 AGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 +G L RL G + R ++ + + Sbjct: 306 SGASMAQLYPLTGVVLPDTPPFDTRGRLIGELRKRGSTWRYEKFTGRVGGSD----LGGT 361 Query: 305 TKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353 + E G H L D + K+ D Sbjct: 362 LAYTMREPRP---QLTGELVSHQLLFADLAPIIGADSNASKAKRADPST 407 >gi|322418330|ref|YP_004197553.1| AsmA family protein [Geobacter sp. M18] gi|320124717|gb|ADW12277.1| AsmA family protein [Geobacter sp. M18] Length = 1059 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 58/370 (15%), Positives = 124/370 (33%), Gaps = 36/370 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK-GGIKIHILPFP 62 +L + ++ ++G+ +P +D ++ + Q + + + + G + + P Sbjct: 9 WLLPIAATILTLAVLGSSLLPRLLDLDTYKAEILAQVKSALKRDLQYQSGEFTMRL--TP 66 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + F D+ I +K+ + + + L++R LPLL E+ + + +++P L + +GV Sbjct: 67 AFSFTDVTIKEKDGATDFATADRLTVRIAILPLLRRELVLSRIQLERPSLKLWRDRQGVF 126 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL---NLQISARFLNIISP 179 N T+ + + +K I+ D + ++DL +L +S Sbjct: 127 NISDL-LTISGGEAPGIHGVELKKAHIRFTDYAFSEKPVVTDLSETDLLLSRITRGKDCN 185 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI-SLKIQLFPLAYPIII-DLFGN 237 + S A T PA I S+ I PI + + Sbjct: 186 FRLSGQLASGRAR-------VPINLSGTVGIPAAGAPIWSMPIHGKVKTGPIDVGHFWPY 238 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297 SG + L G+ G + ++ + + Sbjct: 239 YSRFVPFKSLSGQLELDAS---------------LKGHLNAFKGK---TEFRFTRLNLDY 280 Query: 298 STDEDNKTK-VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356 + S L ++ + H + D F+ K K DL D++ + + Sbjct: 281 PQVFHARLTPKSFKGSCSLELTDRDLDIDHVKADLDGFKVNGKV-KLSDLHSGDLRITAH 339 Query: 357 KKEEKDNSHD 366 N D Sbjct: 340 ATTNSFNLRD 349 >gi|254291740|ref|ZP_04962526.1| asmA protein [Vibrio cholerae AM-19226] gi|150422333|gb|EDN14294.1| asmA protein [Vibrio cholerae AM-19226] Length = 703 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 57/432 (13%), Positives = 126/432 (29%), Gaps = 56/432 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ I L L +++ + L ++ F+ QA G + ++G I P Sbjct: 1 MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + K+E + + +PLL ++++ ++ +D + Sbjct: 61 IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120 Query: 120 GVSNWFQRKS-----------------------TMDMIHNVILEKIHVKGGRIKIIDQES 156 G SN ++ L + V ++I D+++ Sbjct: 121 GRSNLDALTQAQSKPASAPATTDSAPASQPSLSEPTAAWSIELGGVSVSNAVLEITDKKA 180 Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197 L D+ L + + D + A+G Sbjct: 181 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKRYALRNIN 240 Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 N+ + K+ + +KA +L + A + ++ G+ Q I Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAISKV 300 Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + L S K L +S L + N+ D K V Sbjct: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 358 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + + + F+ + E D +E + + + N E + Sbjct: 359 TLADILKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSA 418 Query: 368 ENQENFSGDKMI 379 + +G+ I Sbjct: 419 LKALDVAGEISI 430 >gi|121997931|ref|YP_001002718.1| AsmA family protein [Halorhodospira halophila SL1] gi|121589336|gb|ABM61916.1| AsmA family protein [Halorhodospira halophila SL1] Length = 732 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 51/365 (13%), Positives = 110/365 (30%), Gaps = 38/365 (10%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +L+ +L + LF++++V A V + D D+R+D G+++ ++G I++ P Sbjct: 4 ILKWLLFAVVGLFALLVVAATLVSVVFDPNDYRDDIAAAVEAETGRELTIEGDIRLSFFP 63 Query: 61 FPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 + + + + +E ++E LPLL G++ + I+ P ++ Sbjct: 64 WLGLEVGRVTLADREGFHEDPFLEVEQADAAVRLLPLLWGQLETRLLSIEAPVARLMVNE 123 Query: 119 KGVSNW--------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 +G NW M+ + + V+ G++ D+ D Sbjct: 124 EGEGNWEDLVARLVDDEAPPADPEEEAPAGELPPMLRDAAFGGLQVRRGQLLWEDRSIDD 183 Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIA---EGTGNFDNKRSAFKITANFPAKNK 215 + +L + A L L + +G + Sbjct: 184 RKEVERFDLDVEALRLGQPVALQASWLGHGAELPRIDGQLRLQATLDQAMEQLDLDGLEM 243 Query: 216 AISLKIQLFPLAYP-IIIDLFGNLFWNEKQPIYSGVFSVAGDFS-----KLLNLELSAKK 269 + + P + + G + I V G L L+ + Sbjct: 244 LVDAQGDQVPGRQQRLGVTGNGRIGLGAPLRIEWPELEVTGAGIALEAAADLELDGTGAH 303 Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDED---NKTKVSQDEE----NLLNFSENGA 322 +L + +SR + P T + D + + Sbjct: 304 GQLDWQLPAFNLRTALSRLDIGLPTPADPTAMTRVGGAGLIEFDGQRLLLPEFGLDLDDT 363 Query: 323 ESMHD 327 D Sbjct: 364 RIDLD 368 >gi|330899653|gb|EGH31072.1| AsmA [Pseudomonas syringae pv. japonica str. M301072PT] Length = 688 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 43/377 (11%), Positives = 101/377 (26%), Gaps = 37/377 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G VVL V + DW + + + + + A+ G + + Sbjct: 5 RKIFAWTGATLLVVLAILVIVIVTFDWNRIKPTLNAKVSEALHRPFAINGDLDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + E ++ + R LPLL+ ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLSLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + + + I G + DQ+ + + Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVMDIGAIKFDKGLVSFNDQKLNANLDVV 184 Query: 164 --------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAK 213 + + ++ + TG + ++ + K Sbjct: 185 IDLLGKPIPFSEIVGSKEAKKAQDKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLALK 244 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + +Q + G L + ++G L Sbjct: 245 DANQPFPVQADVKVGDTHALIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDSP 304 Query: 271 --RLSGNFKISDGNVRISRYKLQS--ILPNSSTDEDNKTKVSQDEENLLN-FSENGAESM 325 G + S ++ + +S + V+ L+ + Sbjct: 305 AYSTDGRLIAKLHDPAGSNFRYEGFNGKIGNSDIHGDLGFVASQPRPKLSGVLVSNQLLF 364 Query: 326 HDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 365 SDLAPLIGADSNAAQKK 381 >gi|330888040|gb|EGH20701.1| AsmA family protein [Pseudomonas syringae pv. mori str. 301020] Length = 347 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 42/334 (12%), Positives = 91/334 (27%), Gaps = 41/334 (12%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G VVL V + DW + +A+ + + A+ G + + Sbjct: 5 RKIFAWTGATLLVVLAILVIVLVTFDWNRIKPTLNEKASEALHRPFAINGDLDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + E ++ + R LPLL+ ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLTLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + V + I G + DQ + + Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVVDIGAIKFDKGLVSFNDQTLNANLDVV 184 Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212 ++L + I + TG + ++ + Sbjct: 185 -IDLLGKPIPFSEIVGSKEAQKAQEKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLAL 243 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270 K+ + +Q + G L + ++G L Sbjct: 244 KDASQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303 Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPN 296 G + N R + + + Sbjct: 304 PAYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSD 337 >gi|330953112|gb|EGH53372.1| AsmA [Pseudomonas syringae Cit 7] Length = 688 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 44/380 (11%), Positives = 100/380 (26%), Gaps = 43/380 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G VVL V + DW + + + + + A+ G + + Sbjct: 5 RKIFAWTGATLLVVLAILVIVIVTFDWNRIKPTLNAKVSEALHRPFAINGDLDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + E ++ + R LPLL+ ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLSLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + + + I G + DQ+ + + Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVMDIGAIKFDKGLVSFNDQKLNANLDVV 184 Query: 164 --------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAK 213 + + ++ + TG + ++ + K Sbjct: 185 IDLLGKPIPFSEIVGSKEAKKAQDKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLALK 244 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + +Q + G L + ++G L Sbjct: 245 DANQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDSP 304 Query: 271 --RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENGA 322 G + N R + + + D V+ L+ + Sbjct: 305 AYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GFVASQPRPKLSGVLVSNQ 361 Query: 323 ESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 362 LLFSDLAPLIGADSNAAQKK 381 >gi|238757200|ref|ZP_04618387.1| hypothetical protein yaldo0001_10990 [Yersinia aldovae ATCC 35236] gi|238704578|gb|EEP97108.1| hypothetical protein yaldo0001_10990 [Yersinia aldovae ATCC 35236] Length = 615 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 50/385 (12%), Positives = 109/385 (28%), Gaps = 55/385 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+L L L V++ G + L ++ DFR +Q G + ++G ++ H+ P Sbjct: 1 MRRLLTTLVILLVVLVAGMSALVLLVNPNDFRAYMVKQVEKKSGYHLQLEGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + S E + + + PLLS ++ V + + + S+ Sbjct: 61 LSIIAGRTALTAPGANSPVISAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLTPDSEAQ 120 Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + + K+ + + ++DQ + D+NL++ Sbjct: 121 QQPDAPVAPSGSAPINAHKAWKLDINKVQIADSLLIWQRSDNDQ-VNVRDINLELKQDAQ 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 N ++ A SL I YP Sbjct: 180 R-----------------------QVHVTLASRVNRNQRDIAFSLVIDADMRHYPQQFSA 216 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 I + + G + + + L +++ + +++ + Sbjct: 217 N----------ISQFTYKMEGAGIPVGGVS---GEGALQASYQSDVQQLLLNQLSFTA-- 261 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354 + K + + + D F E K + Sbjct: 262 --NHNQLTGSAKATLGKVPDYIVNLATDNLNLD----TIFGWEPKNASASKETAKQPAIT 315 Query: 355 V---NKKEEKDNSHDKENQENFSGD 376 E D D + +F+ Sbjct: 316 APVIATAAEDDVGQDLQVLRDFTAQ 340 >gi|212712124|ref|ZP_03320252.1| hypothetical protein PROVALCAL_03206 [Providencia alcalifaciens DSM 30120] gi|212685171|gb|EEB44699.1| hypothetical protein PROVALCAL_03206 [Providencia alcalifaciens DSM 30120] Length = 620 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 55/399 (13%), Positives = 118/399 (29%), Gaps = 62/399 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R L L L VV+ G + + ++ DFR +Q G ++ KG ++ H+ P Sbjct: 1 MKRFLTTLIILLVVVVAGLTALVMLVNPNDFRSYLVQQVEKKSGYQLDFKGDMRWHVWPT 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ----------PH 111 S+ I + + + + + PL+S + V + ID P Sbjct: 61 LSIITGPISVTAPNASQPVLSADNMRLDVDLWPLISHRLSVEQIVIDGAVIRKTPESEPV 120 Query: 112 LNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 + ++ + + KI + + + Y L ++NL + Sbjct: 121 ATVNTPVAPGGSQVPADTSDKSKWLLDISKIDITNSLVIWQTPKD--EYNLRNINLSLK- 177 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 D + ++ G N + + F I ++ + + Sbjct: 178 ---------KSDDKQVALKFSGNLNKNQQEFNFDIKSDIDLSKLSQQVS----------- 217 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 I + ++G + L + G + + +Q Sbjct: 218 ------------GKITQFDYQLSGVDLPENGISGKIISDFLYTK--SNSGAISLDNIFIQ 263 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL-----------NETDFFEEEEKK 340 + + ++ + + +N + + D N E Sbjct: 264 A----NESELTGTISANLTDIPDVNVNLSSPSLNLDRLIGQAPAAGKSNTASAASENTVI 319 Query: 341 NKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 N K I S +K + + Q N S D +I Sbjct: 320 NNERVGVKPVISGSNMQKYDLTGLNGFTAQFNVSMDTLI 358 >gi|257483280|ref|ZP_05637321.1| AsmA family protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331012503|gb|EGH92559.1| AsmA family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 688 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 46/381 (12%), Positives = 101/381 (26%), Gaps = 45/381 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G +VL V + DW + + + + + A+ G + + Sbjct: 5 RKIFAWTGATLLMVLTILVIVLVTFDWNRIKPTLNEKVSEALHRPFAINGDLDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + E ++ + R LPLL+ ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLTLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + V + I G + DQ + + Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVVDIGAIKFDKGLVSFNDQTLNANLDVV 184 Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212 ++L + I + TG + ++ + Sbjct: 185 -IDLLGKPIPFSEIVGSKEAQKAQEKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLAL 243 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270 K+ + +Q + G L + ++G L Sbjct: 244 KDASQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303 Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321 G + N R + + + D V+ L+ + Sbjct: 304 PAYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSN 360 Query: 322 AESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381 >gi|330976735|gb|EGH76776.1| AsmA [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 676 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 44/380 (11%), Positives = 100/380 (26%), Gaps = 43/380 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G VVL V + DW + + + + + A+ G + + Sbjct: 5 RKIFAWTGATLLVVLAILVIVIVTFDWNRIKPTLNAKVSEALHRPFAINGDLDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + E ++ + R LPLL+ ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLSLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + + + I G + DQ+ + + Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVMDIGAIKFDKGLVSFNDQKLNANLDVV 184 Query: 164 --------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAK 213 + + ++ + TG + ++ + K Sbjct: 185 IDLLGKPIPFSEIVGSKEAKKAQDKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLALK 244 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + +Q + G L + ++G L Sbjct: 245 DANQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDSP 304 Query: 271 --RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENGA 322 G + N R + + + D V+ L+ + Sbjct: 305 AYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GFVASQPRPKLSGVLVSNQ 361 Query: 323 ESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 362 LLFSDLAPLIGADSNAAQKK 381 >gi|241662404|ref|YP_002980764.1| AsmA family protein [Ralstonia pickettii 12D] gi|240864431|gb|ACS62092.1| AsmA family protein [Ralstonia pickettii 12D] Length = 765 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 99/358 (27%), Gaps = 59/358 (16%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58 ++ +GL V++ A L DW + + + +G+ A+ G + + Sbjct: 6 KLALGLVITPVVIVAAAVIFVLTFDWNRAKPYLNDRISQAIGRPFAINGDLILTWKKPQG 65 Query: 59 -------LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P + DI + E + I L+ E LPLL+ I + + +D Sbjct: 66 ESGWRAYVPWPRLIANDITVGNPEWAKQPNVATIHQLTFVLEALPLLAHRIVIPSVTLDT 125 Query: 110 PHLNFYLSSKGVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIID---------- 153 P + + +NW + L +I G + + D Sbjct: 126 PAIALERDKQHRNNWTFNLAGSEGDDKKPSDWKLDLREIAFSKGSLALDDDIKRIHLTAT 185 Query: 154 -----------QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS-------VIAEGTG 195 + V +D ++ A S + + + G Sbjct: 186 IDTVDNQALYTAANGTVVKSADQPAKVPAASGAAASDTAAQTPVAPDPQQPYGIAWTVKG 245 Query: 196 NFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253 ++N A + + +Q IDL G L + Sbjct: 246 TYNNATITGTGKAGGVLRLQDAQRPYPLQADVTVGKTRIDLAGTLTNPASLTALDLRLHL 305 Query: 254 AGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 +G L RL G + R ++ + + Sbjct: 306 SGASMAQLYPLTGVVLPDTPPFDTRGRLIGELRKQGSTWRYEKFTGRVGGSDLGGTLT 363 >gi|289675600|ref|ZP_06496490.1| AsmA [Pseudomonas syringae pv. syringae FF5] Length = 441 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 44/380 (11%), Positives = 100/380 (26%), Gaps = 43/380 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G VVL V + DW + + + + + A+ G + + Sbjct: 5 RKIFAWTGATLLVVLAILVIVIVTFDWNRIKPTLNAKVSEALHRPFAINGDLDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + E ++ + R LPLL+ ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLSLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + + + I G + DQ+ + + Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVMDIGAIKFDKGLVSFNDQKLNANLDVV 184 Query: 164 --------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAK 213 + + ++ + TG + ++ + K Sbjct: 185 IDLLGKPIPFSEIVGSKEAKKAQDKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLALK 244 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + +Q + G L + ++G L Sbjct: 245 DANQPFPVQADVKVGDTHALIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDSP 304 Query: 271 --RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENGA 322 G + N R + + + D V+ L+ + Sbjct: 305 AYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GFVASQPRPKLSGVLVSNQ 361 Query: 323 ESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 362 LLFSDLAPLIGADSNAAQKK 381 >gi|86147928|ref|ZP_01066232.1| AsmA protein [Vibrio sp. MED222] gi|85834253|gb|EAQ52407.1| AsmA protein [Vibrio sp. MED222] Length = 727 Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 59/401 (14%), Positives = 116/401 (28%), Gaps = 59/401 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++LI + VV+ + L ++ F+ QA G ++ ++G I P Sbjct: 1 MKKLLIFIAVPVFVVVAAILALVLLVNPNQFKPLIVEQAQKHTGLELVIEGDISWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + E K++ + + PL S ++ + ++ +D Sbjct: 61 IGFELGQTELRNPEGFTQPNLFKVDTVGVDVSVTPLFSNQLEIGNITLDGAEFYLETLKD 120 Query: 120 GVSNWFQ--------------------------RKSTMDMIHNVILEKIHVKGGRIKIID 153 G N + ST + L + V ++ D Sbjct: 121 GRKNIDALTQVSAPKESEPAADTSSEATPAPQEQTSTDTSGWTINLAGVTVSNALFEMDD 180 Query: 154 QESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------- 202 +++ L D++L +S + S ++ + A G+ F Sbjct: 181 KQAGSFTKLYDVSLSLSEFAVDTWTTATFAASGENNQQKFSANGSAEFKLAEGFASYALR 240 Query: 203 ----------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 + KI N +K L + A + +DL G I Sbjct: 241 NIDLNAKFNDPATSIESAKIGLNTFEFDKVNQLTYAVIGNAAGLDLDLKGGGDLTVDSAI 300 Query: 247 YSGVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 + S L S K + + +S + L + N+ D K Sbjct: 301 SKVTLNKLTLDSTFKGETLPQSPMKVDMLSDLSFDLTKSHLS-FVLAKLQANA-IALDGK 358 Query: 305 TKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ E + FS + D EE D Sbjct: 359 ADITLSEIPKVRFSLHSPNIDLDEFLGLGNTEETASAAPSD 399 >gi|218709006|ref|YP_002416627.1| AsmA protein [Vibrio splendidus LGP32] gi|218322025|emb|CAV18063.1| AsmA protein [Vibrio splendidus LGP32] Length = 727 Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 59/401 (14%), Positives = 116/401 (28%), Gaps = 59/401 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++LI + VV+ + L ++ F+ QA G ++ ++G I P Sbjct: 1 MKKLLIFIAVPVFVVVAAILALVLLVNPNQFKPLIVEQAQKHTGLELVIEGDISWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + E K++ + + PL S ++ + ++ +D Sbjct: 61 IGFELGQTELRNPEGFTQPNLFKVDTVGVDVSVTPLFSNQLEIGNITLDGAEFYLETLKD 120 Query: 120 GVSNWFQ--------------------------RKSTMDMIHNVILEKIHVKGGRIKIID 153 G N + ST + L + V ++ D Sbjct: 121 GRKNIDALTQVSAPKESEPAADTSSEATPAPQEQTSTDTSGWTINLAGVTVSNALFEMDD 180 Query: 154 QESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------- 202 +++ L D++L +S + S ++ + A G+ F Sbjct: 181 KQAGSFTKLYDVSLSLSEFAVDTWTTATFAASGENNQQKFSANGSAEFKLAEGFASYALR 240 Query: 203 ----------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 + KI N +K L + A + +DL G I Sbjct: 241 NIDLNAKFNDPATSIESAKIGLNTFEFDKVNQLTYAVIGNAAGLDLDLKGGGDLTVDSAI 300 Query: 247 YSGVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 + S L S K + + +S + L + N+ D K Sbjct: 301 SKVTLNKLTLDSTFKGETLPQSPMKVDMLSDLSFDLTKSHLS-FVLAKLQANA-IALDGK 358 Query: 305 TKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ E + FS + D EE D Sbjct: 359 ADITLSEIPKVRFSLHSPNIDLDEFLGLGNTEETASAAPSD 399 >gi|217976783|ref|YP_002360930.1| AsmA family protein [Methylocella silvestris BL2] gi|217502159|gb|ACK49568.1| AsmA family protein [Methylocella silvestris BL2] Length = 1186 Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 56/328 (17%), Positives = 106/328 (32%), Gaps = 26/328 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR L +VL A P +DW+ R + + + +G++ + G I + +LP Sbjct: 40 LRDSLTVFAIGVILVLTAALVGPYLVDWSAERGLIQSRLSAAIGRQTEIAGPIDLKLLPT 99 Query: 62 PSVFFKDIRIDQKEDGSFE-SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 P DI + E + + + + F PLL GE+ + I+ P L L G Sbjct: 100 PYFVVGDISVKGPEGPASWRASASKMRLEIAFAPLLRGEVEFVEAAIENPRLEVSLGPDG 159 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + NV ++I GG + I D ++ + L L+L Sbjct: 160 A--PALTLKDSPLARNVRFQRIKATGGSLLIDDPTRNRRFELGGLDL-----------EA 206 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 S+ G G+ + R +F+ A+ + LK+ + + G L Sbjct: 207 EAGSLYGPFKGHGSAPLPDGRFSFQF-LTGAAEAGEMKLKLSAEAPSRGA-LSFEGGLTL 264 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 + +G + L L ++ + +S Sbjct: 265 TPEAQKLAGALRLQSADPALRTLS----------QLTLTPQRAAFDEIEATLGEEPNSAT 314 Query: 301 EDNKTKVSQDEENLLNFSENGAESMHDL 328 ++ + + + DL Sbjct: 315 AKGVGELDFSGAPKASLTLSSDRVDVDL 342 >gi|90413233|ref|ZP_01221228.1| Hypothetical AsmA protein [Photobacterium profundum 3TCK] gi|90325785|gb|EAS42243.1| Hypothetical AsmA protein [Photobacterium profundum 3TCK] Length = 713 Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 56/422 (13%), Positives = 113/422 (26%), Gaps = 61/422 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L L + V++VG + +D F+ Q G+ + + G I P Sbjct: 1 MKKLLYVLLAIVLVIVVGIGALLALVDPNQFKPLLSEQVKKATGRDLVINGDISWRFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + K+ + +PL S + + + ++ + Sbjct: 61 IGFSLGETEFKNPQGFAEADLVKLGSAELSVSVMPLFSQHLEIGSISLNDARVFIQTRKD 120 Query: 120 GVSNWF------------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQE 155 GVSN +S + L + V ++ D + Sbjct: 121 GVSNLDGLGEQAAVEGTVTENTNSEPVTQLPVESEATQPWTISLAGVEVMNASAELRDDK 180 Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD-----------NKRSAF 204 + + LN ++ + + D + T D + A Sbjct: 181 AGTATTIDSLNFKLDTFSPGEWTQANFDITGKNAELSFTAKGDSQLLIATDYKGGELKAL 240 Query: 205 KITAN-FPAKNKAISLKIQLFPLAYP--IIIDLFGNLFWNEKQPIYSGVFSVA------- 254 +TA+ + N SL + + L I E SG Sbjct: 241 NLTASAKDSINNIESLTLGVDHLKVGDWANITFTAKGQIPELAFDASGATRFKISTDYNM 300 Query: 255 --------GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 K L K L+ + + + + D K Sbjct: 301 AELDKLTLSSDLKGSTLPRPEMKVGLNADATYDVAKGLATLSRFE--TSIDELLLDGKGS 358 Query: 307 VSQDEENLLNFSENGAESMHDLN----ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKD 362 ++ F N D + ++ K+ +V+K EE D Sbjct: 359 FKSATIPVIRFDVNSDNIDLDAFLGTASSASNKDTTKEETGSVPSAGGETSTVSKSEEPD 418 Query: 363 NS 364 S Sbjct: 419 LS 420 >gi|259908043|ref|YP_002648399.1| putative assembly protein [Erwinia pyrifoliae Ep1/96] gi|224963665|emb|CAX55162.1| Wzc (similar to AsmA) suppressor of OmpF assembly mutants [Erwinia pyrifoliae Ep1/96] gi|283477940|emb|CAY73856.1| Protein asmA precursor [Erwinia pyrifoliae DSM 12163] Length = 615 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 43/330 (13%), Positives = 97/330 (29%), Gaps = 52/330 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R + L L VV+ G + + ++ DFR RQ G +A+ G ++ H+ P Sbjct: 1 MKRFITTLAILLVVVVAGMTALVMLVNPNDFRAYMVRQVEQRSGYHLALNGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + LPL S ++ V + + + SK + Sbjct: 61 LSILSGPVTLTAPGARQPVVSAANMRLDVNLLPLFSHQLSVKQVMLKGAVIRLTPDSKSL 120 Query: 122 S-----------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + F + + + + G + Q + + + DLNL + Sbjct: 121 PPVNAPIGPAGSSTFSPTDDVARGWKFDISHLRIADGLLVW-QQSNGEQLNVRDLNLALD 179 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 N + + L +L YP Sbjct: 180 QNQPR-----------------------QVHIEISSRINRDQRELQLDLSSELDITDYPQ 216 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 + + + + G L ++ A ++ N++ G + L Sbjct: 217 RVK----------AIVQQSDYQLKGVDLPLAGIQGKA---QMKANWESLTGRFSLEDIHL 263 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSEN 320 + + + + L + + Sbjct: 264 NA----NDSQLSGTLSGTLGAHPELLANLH 289 >gi|157144986|ref|YP_001452305.1| putative assembly protein [Citrobacter koseri ATCC BAA-895] gi|157082191|gb|ABV11869.1| hypothetical protein CKO_00717 [Citrobacter koseri ATCC BAA-895] Length = 617 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 41/335 (12%), Positives = 101/335 (30%), Gaps = 50/335 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + + ++ DFR +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVMLVNPNDFRAYMVQQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY------ 115 S+ + + + + + + + PLLS +++V + + + Sbjct: 61 LSILSGRMALTAEGASEPLVRADNMRLDVALWPLLSHQLKVEQVMLKGAVIQLTPQTEAA 120 Query: 116 LSSK---GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + + + V + E D+ + D+ LQ+ Sbjct: 121 RREDAPVAPKDNTLPDVPEDRGWSFDISSLRVADSVLVF-QHEDDEQITVRDIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + F N ++ ++S + YP Sbjct: 180 EQHRGT-----------------------FDFSGRVNRDQRDLSLSFNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 N I + + G ++ + + + S+ L + Sbjct: 214 -------HNLTAGIEQLNWQLQGADLPKQGIQGQGQLQAQWQEGQ---KRLSFSQLSLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + + +V+ +E + D Sbjct: 264 ----NDSTLTGQAQVTLSDEPEWAIDLQFGKLNLD 294 >gi|144897494|emb|CAM74358.1| AsmA protein [Magnetospirillum gryphiswaldense MSR-1] Length = 673 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 52/393 (13%), Positives = 118/393 (30%), Gaps = 53/393 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++VL +G + + + +P+ + +E+ Q G+ + ++G + + P Sbjct: 1 MKKVLAIIGVIVVLAIGALVALPMLVPADRIKEEVVAQVKAATGRDLTIQGKVSVSAFPS 60 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V +I + S ++ L ++ + LP+LSG + V + P + + K Sbjct: 61 LGVEVANIALANPAGFSTKDLVRLGALDVKLKLLPILSGRVEVDSFVLVDPVITLEVDRK 120 Query: 120 GVSNWFQ--------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159 G +NW + +++L + + G++ ID + Sbjct: 121 GKANWVFDTPAAAPAAADKTKPSEKSAGGGASAGLGDLVLGDVRISNGKLTYIDGPAGTK 180 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF-----KITANFPAKN 214 + +NL +S+ S+ + +G N+ K K A K+ Sbjct: 181 EEVDGINL-----------TVSLKSLDDPLAVKGALNWRAKAIELGLNVAKPRALIDGKS 229 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFW-NEKQPIYSG----VFSVAGDFSKLLNLELSAKK 269 A + I P+ + G + S + L Sbjct: 230 SAADITISSEPVKLAFKGEANGGATAGAKGNIDLSVPSIRTLAQWATGKPLAMEGSGLGP 289 Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 L+G + + +++ K+ + + V + D+ Sbjct: 290 FSLTGQLAAAGSKLSLTQAKI----AIDAIKANGDFNVDTGGARP------ALKGKLDVE 339 Query: 330 ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKD 362 D K + D Sbjct: 340 ALDLNPYLPADKPASGATTSAPAAGGGSKGKSD 372 >gi|268590243|ref|ZP_06124464.1| protein AsmA [Providencia rettgeri DSM 1131] gi|291314527|gb|EFE54980.1| protein AsmA [Providencia rettgeri DSM 1131] Length = 612 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 51/387 (13%), Positives = 124/387 (32%), Gaps = 58/387 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R L L L V++ G T+ + ++ DFR Q G ++ G ++ H+ P Sbjct: 1 MKRFLTTLIILLVVIVAGLTTLVMLVNPNDFRHYIVEQVEKKSGYQLEFNGDMRWHVWPT 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + E PL+S ++ V + ID + S+ Sbjct: 61 LSIITGPVSLTAPNAAKPILSADNMRLDVELWPLISHKLSVEQIVIDGAVIRKTPDSEIQ 120 Query: 122 SNWFQR----------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 ++ + +EKI++ + Q S + L +++L + Sbjct: 121 THRNAPVAPGGVPTSSPLPEKNSWLLDIEKINISNSLVIW--QTSKDEFNLRNIDLSLK- 177 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 D + +V G N + + F + A+ + + +L Sbjct: 178 ---------KSDKKQVAVKFSGNLNKNQQEFVFNLRADIDLSDINQKISGKL-------- 220 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 + ++G +E +++ +F + G V + Sbjct: 221 ---------------TQFDYKLSGVDLPESGIEG-----QIASDFLYTKGKVESASLS-H 259 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKD 349 ++ + + + + + + + D L E + N+ + Sbjct: 260 LVITANESALSGDASIQLADTPKIMVNLVAEKLDLDNLLGTVPSSTHIESEVNNNRVGVK 319 Query: 350 DIQYSVNKKEEKDNSHDKENQENFSGD 376 + N + +D + FS + Sbjct: 320 PVISGANPQ-----QYDLSGLQAFSAN 341 >gi|148549937|ref|YP_001270039.1| AsmA family protein [Pseudomonas putida F1] gi|148513995|gb|ABQ80855.1| AsmA family protein [Pseudomonas putida F1] Length = 688 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 102/356 (28%), Gaps = 32/356 (8%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 R+L+ VL V DW + + + + + A+ G + +H Sbjct: 6 RILVWTLASLLTVLAILVVVIATFDWNRVKPLLNEKVSEALHRPFAINGNLAVHWRTEPE 65 Query: 58 ------ILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P +D+ + E +E + R LPL+ +I + + + + Sbjct: 66 EGGWRAWVPWPHFIAEDLTLGNPEWLKEPKMVGLERVEFRLAPLPLVFQQISIPRINLTK 125 Query: 110 PHLNFYLSSKGVSNW-----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 P + + G +NW + ++ + + I G + DQ + Sbjct: 126 PTASLTRLADGRANWVFDFGPKDENAEPSKWQLDIGAIGFDQGNVSFDDQTLKTSMKVQI 185 Query: 165 LNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITAN--FPAKNKAIS 218 L F I+ S + G + + G + + + ++ + Sbjct: 186 DPLGKPIPFSEIVGKASAEKAGGAQDYAFALKAQGRYKGQPVSGTGKIGGLLALQDASQP 245 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLS 273 +Q + L G L ++G L Sbjct: 246 FPLQADVRIADTHVVLAGTLTDPRNLGALDLRLRLSGASLGNLYPLTGVTLPDTPAYSTD 305 Query: 274 GNFKISDGNVRISRYKLQS--ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 G + + + + Q S + V+ L+ + + + Sbjct: 306 GRLSANLQAAQGASFNYQGFNGKIGDSDIHGDLAFVASQPRPRLSGNLVSNQLLFK 361 >gi|308187487|ref|YP_003931618.1| Protein asmA precursor [Pantoea vagans C9-1] gi|308057997|gb|ADO10169.1| Protein asmA precursor [Pantoea vagans C9-1] Length = 607 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 50/386 (12%), Positives = 113/386 (29%), Gaps = 49/386 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++RV+ L L VV+ G + L ++ DFR +Q G ++ V ++ H+ P Sbjct: 1 MKRVITTLAILLVVVVTGMSALVLLVNPNDFRAYMVQQVEQRSGYRLEVSSDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + E + + + PLLS ++ V + + + S Sbjct: 61 LSILAGRMSLTAPGASQPLVSAENMRLDVDLWPLLSHQLSVSQVLLKNAIVRVTPESSAQ 120 Query: 122 S-------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + + + K+ V + D+ Y DLN+ + Sbjct: 121 RAKNAPQGPRDAEPAPASSGWSFDIAKLRVADSLLIWQQPGGDE-YNFRDLNINMDQDAN 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 + + + + +N ++LK QL YP + Sbjct: 180 KLAT-----------------------LSLSTSLMRNQRNATLNLKGQLDASQYPHRLS- 215 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 + ++++G + ++ S L G + S +L + Sbjct: 216 ---------GQLQQLDYTLSGADVPVQGIKGSL---SLQGEWDGDRQQFSFSNLQLTA-- 261 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-LNETDFFEEEEKKNKNDDLKKDDIQY 353 + + + + L + D L + E + I Sbjct: 262 --NDSTLTGQGRGQVTPPQQLALDLKASTLNLDNLLTSTPVSETPGVQHATVARSPVIAA 319 Query: 354 SVNKKEEKDNSHDKENQENFSGDKMI 379 + ++ D ++ Sbjct: 320 PRERSNADSPLNELNLALKLQADSVV 345 >gi|288933110|ref|YP_003437169.1| AsmA family protein [Klebsiella variicola At-22] gi|288887839|gb|ADC56157.1| AsmA family protein [Klebsiella variicola At-22] Length = 683 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 51/406 (12%), Positives = 113/406 (27%), Gaps = 45/406 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56 R+ L+ + +++V F V DW + ++ + + + A++G + + Sbjct: 5 RKTLVIITGTILLLIVLFFIVLATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQP 64 Query: 57 ------HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P+P V +DI + + + L LLS + + + ++ Sbjct: 65 DERGWRSWIPWPHVHAEDIVLGNPPAIPQVTMIHLPRVEATLAPLALLSKTVYLPWIKLE 124 Query: 109 QPHLNFYLSSKGVSNWFQR--------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 QP + ++ +NW + + + L+ I G I I D+ + Sbjct: 125 QPDVRLIRLAEDNNNWTFQLAGDQRTSGDSAPSSWSFRLDNILFDRGTIAIDDKITRSDI 184 Query: 161 FL------SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214 + L + S + + +G KI ++ Sbjct: 185 TILVDPLGKPLPFSEVTGTKDQHSAAKVGDYVFGLSLKGRYKDQPVTGNGKIGGMLALRS 244 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270 + +Q + + G + AGD + L Sbjct: 245 ASTPFPLQGDFHSGNTRVAFSGTVSDPLNVGGIDLRLKFAGDSLRDLYDLTGVLLPETPS 304 Query: 271 -----RLSGNFKISDG-NVRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAE 323 RL +FK + + + + + L+ + Sbjct: 305 FSTDGRLRADFKQKNRMRFDYQDFNGRIGDSD----IHGSLTYTTGKPRPKLSGDMESKQ 360 Query: 324 SMH-DLNETDFFEEEEKKNKNDDLKKDD-IQYSVNKKEEKDNSHDK 367 DL + + K + D Q + DK Sbjct: 361 LRLADLGPLIGVDSGKGTKKGAARQAGDRPQPAGKVLPADRFETDK 406 >gi|288549838|ref|ZP_05968369.2| protein AsmA [Enterobacter cancerogenus ATCC 35316] gi|288317605|gb|EFC56543.1| protein AsmA [Enterobacter cancerogenus ATCC 35316] Length = 616 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 49/391 (12%), Positives = 108/391 (27%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RRVL L L V++ G + L ++ DFR RQ G ++ + G ++ H+ P Sbjct: 1 MRRVLTTLMILLVVLVAGLSALVLLVNPNDFRAYMVRQVEARSGYELKLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + +PL S +++V + + + S+ V Sbjct: 61 LSILSGRMSLTAPGASQPLVAADNMRLDVALIPLFSHQLQVDRVMLKGAVIQLTPQSEAV 120 Query: 122 SNWFQ---------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 D + + + + + E D+ + +++L + Sbjct: 121 RQPDAPVAPHENTLPDVPSDAGWSFDIANLKIADSVLVF-QHEDDEQVTVRNISLTMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 +I + AF N ++ +S+ + YP + Sbjct: 180 ANHIAT-----------------------MAFSGRINRDQRDLTLSMDANVNASDYPHQL 216 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + + G + G + Sbjct: 217 TADIR----------QLNWQLTGADLPTKGITG-------QGTLQAIWQEEHKQLQLNNL 259 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 L + + + V+ EE + + +N K Sbjct: 260 NLQANDSSMKGQASVTLAEEPKWVLDLQFDTLNLENLLPTQPASTADAGAAQNGQSQAMK 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S N D F+ D ++ Sbjct: 320 PRPVISSNLD-----QPDYNGLRGFTADILL 345 >gi|315127947|ref|YP_004069950.1| AsmA protein [Pseudoalteromonas sp. SM9913] gi|315016461|gb|ADT69799.1| AsmA protein [Pseudoalteromonas sp. SM9913] Length = 645 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 56/372 (15%), Positives = 128/372 (34%), Gaps = 36/372 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + +G + + + P I Q G+ + +KG + + P Sbjct: 1 MKTLFKVIGVILLLCIALIVAAPFLIPTDTIFNKVSEQVEKTTGRTLTIKGDKTLSVFPA 60 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + D+ GS + ++ L++ +L LL GE+++ I++P + Sbjct: 61 LKLELNDVHFANMPSGSRADMASMQQLAVHIPWLSLLGGELKLEKFVINEPDILLETDKS 120 Query: 120 GVSNWFQRKSTMDMIHN---------------VILEKIHVKGGRIKIIDQESDQVYFLSD 164 G +NW + + L ++ + GG +D ++ +SD Sbjct: 121 GKANWQLFDAVAKQPEQQTQAGEAVKLPENFDIQLGEVAIYGGSFTYLDGQTGAKQQISD 180 Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 L L I + S++ + G + +R + N PAK + + Sbjct: 181 LELAI-----------LLPSLRKQLEVTGAITYMQERFELDVKLNTPAKAIEGA-TFNVK 228 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI----SD 280 ++DL + ++ G+ ++ GD K + + + F ++ Sbjct: 229 QTLNSRLVDLMFDGSIAKQGQDIKGLLTLNGDSVKNIANWQGVDLNAKNNAFNAFSINAE 288 Query: 281 GNVRISRYKLQSILPN-SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339 ++ + L ++ + + K+K++ L + + M DLN +K Sbjct: 289 MHLLGEEFNLTELVATLDALEIKGKSKLNLGS--RLAVNADIDLGMLDLNPYLPETVAKK 346 Query: 340 KNKNDDLKKDDI 351 + D K Sbjct: 347 EVPAKDDSKPAE 358 >gi|83312506|ref|YP_422770.1| hypothetical protein amb3407 [Magnetospirillum magneticum AMB-1] gi|82947347|dbj|BAE52211.1| Uncharacterized protein involved in outer membrane biogenesis [Magnetospirillum magneticum AMB-1] Length = 686 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 50/363 (13%), Positives = 123/363 (33%), Gaps = 51/363 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++VLI +G + +++ +P I + + G+ ++++G + + P Sbjct: 19 MKKVLIAVGVVVILIIGALVALPALIPAERIQSEIVAGVKSATGRDLSIQGKLSVSAFPS 78 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 SV ++ + + ++ + +R + +PLL G++ V + P + + Sbjct: 79 LSVQVGNVALANPPGFTTKDLIRLGAVDVRLKLMPLLGGKVEVDSFVLVDPVIVLETDRQ 138 Query: 120 GVSNWFQRKST----------------------MDMIHNVILEKIHVKGGRIKIIDQESD 157 G NW T ++++ L + + G++ ID ++ Sbjct: 139 GKGNWVFDSPTAPAPAAAKPADKPADKAASAASTGGLNDIRLGDVRITNGKLIQIDGKTG 198 Query: 158 QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217 +SD+NL +++ S+ + A+G+ ++ K+ + Sbjct: 199 AKQEVSDINL-----------QVALKSLTDPLSAKGSLVWNAKKIELALGVTSLKALMDG 247 Query: 218 SLK-IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE---------LSA 267 +++ + P+ + L GN P G + + L Sbjct: 248 QSSALEVSVASEPVKLGLKGNAK-GGAAPGVDGTLELTVPSIRNLAAWAGSPITMAGNGL 306 Query: 268 KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 ++G G V ++ + + D T + + + M D Sbjct: 307 GPLSINGKLAAGPGQVAFTQAAIAIDAIKAKGDVTVNTS---GAKPAIKGRLDVD--MLD 361 Query: 328 LNE 330 LN Sbjct: 362 LNP 364 >gi|260599817|ref|YP_003212388.1| hypothetical protein CTU_40250 [Cronobacter turicensis z3032] gi|260218994|emb|CBA34349.1| Uncharacterized protein yhjG [Cronobacter turicensis z3032] Length = 685 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 50/388 (12%), Positives = 111/388 (28%), Gaps = 45/388 (11%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 +++ + +F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KIISVVAGVFLLLVVVAIIIIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERNKE 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +D+ + D + + L LL+ + + + + Sbjct: 66 EPGWRSWVPWPHVHAEDVVLGNPPDIPQVTMIHLPRVEATLAPLALLTKTVYLPWIKFQK 125 Query: 110 PHLNFYLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 P S+ +NW ++ + L+ I GR+++ D S + Sbjct: 126 PDAQLIRLSEKTNNWTFDMKQSEGEEAQPPSSWSFRLDNILFDQGRLRVDDNVSRADVEI 185 Query: 163 SDLNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITAN--FPAKNKA 216 L F + + G ++N+ K+K Sbjct: 186 LIDPLGKPLPFNEVTGEKGKKGNDKVGDYVFGLKARGTYNNQPLRGDGKIGGMLALKSKG 245 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS------ 270 +Q + + G + AG+ L Sbjct: 246 TPFPVQADLRSGDTRVAFAGTVNDPMNMGGVDLQLKFAGNSLGDLYELTGVLLPDTPPFE 305 Query: 271 ---RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESM 325 RL G+V + + + SQ L + Sbjct: 306 TDGRLVAKINSDKGSVYDYRGFNGRIGESD----IHGSLTYSQGKPRPKLEGDLESRQLR 361 Query: 326 H-DLNETDFFEEEEK--KNKNDDLKKDD 350 DL + K+KN + KK + Sbjct: 362 LADLGPLIGVDSGAGAEKSKNSEQKKGE 389 >gi|227356727|ref|ZP_03841113.1| outer membrane assembly protein [Proteus mirabilis ATCC 29906] gi|227163235|gb|EEI48166.1| outer membrane assembly protein [Proteus mirabilis ATCC 29906] Length = 643 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 103/356 (28%), Gaps = 51/356 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R L L L V+L G T+ L I+ DFR + G K+ ++ ++ H+ P Sbjct: 1 MKRFLTTLAILLVVILAGLTTLVLLINPNDFRGYLVERVEKQSGYKLTLQDDMRWHVWPK 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + E PLLS ++ V ++ + + SK + Sbjct: 61 LSIISGKMSLTAPGAEQPLITADNMRLDVELWPLLSHQLEVKEVMLKGAVVRQTPESKAI 120 Query: 122 SNWFQRKSTMDMI-----------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + + + K+ + I + + L D+NL + Sbjct: 121 PKITPPSVANEDSTRPIIEPKTNRWQLNIAKVRISDSLIIW-QTKGGEQLNLRDINLLLK 179 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 N + +++ YP Sbjct: 180 TDDK-----------------------KQINLEMSTKINRDRRELMLNVVANADMSGYPY 216 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 I I ++++G + L+ +F I + +V + Sbjct: 217 QISGN----------IAQLDYALSGIGLPAQGISG-----NLTSDFNIKNDSVNVIALN- 260 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346 + + + ++N G + + + + + L Sbjct: 261 NLNMTANESQLQGSITAELAKKNRYQVELTGDTLNLNTLLPELAQPNSSETASLTL 316 >gi|167648599|ref|YP_001686262.1| AsmA family protein [Caulobacter sp. K31] gi|167351029|gb|ABZ73764.1| AsmA family protein [Caulobacter sp. K31] Length = 649 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 107/328 (32%), Gaps = 36/328 (10%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKED------- 76 + DW FR R A+ + +++ + G +++H F P V +RI Q + Sbjct: 1 MVFDWNWFRGPVGRMASARLNRQVVITGDLRVHPWSFSPKVEAYGVRIAQPDWAAKADPK 60 Query: 77 ----GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--QRKST 130 GS +K++ ++++ LPLL GE+ + + ID+P + + G +NW + Sbjct: 61 GSAAGSQMAKVDRIAVQIRILPLLKGEVILPLLAIDRPDVRLLRDASGRANWTFGDPNAP 120 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + ++ + G+++ DQ+ D + + N + +G + Sbjct: 121 KTPLKLPAIQHFIINDGQLRYEDQQRDV--------FFLGSVSSNEHATTDG---RGKFV 169 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAI-SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 EG G + +T A + G++ + Sbjct: 170 LEGKGQLNRAPFTALVTGGPLLNISPNRPYPFDAQIDAGSTHVTAKGDITKPFDLGRFET 229 Query: 250 VFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 SV+G L ++SG+ ++ + + Sbjct: 230 QVSVSGTDLNRLYALTGLALPNTPPYKISGHLSRKGERFDFNKLTGRVGDSD----VSGD 285 Query: 305 TKVSQDEENLLNFSENGAESMHDLNETD 332 V + + D ++ Sbjct: 286 LFVLMGKARPY-LEADLQSQRLDFDDLG 312 >gi|26991537|ref|NP_746962.1| AsmA family protein [Pseudomonas putida KT2440] gi|24986621|gb|AAN70426.1|AE016684_5 conserved hypothetical protein [Pseudomonas putida KT2440] Length = 688 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 104/356 (29%), Gaps = 32/356 (8%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 R+L+ VL V DW + + + + + A+ G + +H Sbjct: 6 RILVWTLASLLTVLAILVVVIATFDWNRVKPLLNEKVSEALHRPFAINGNLAVHWRTEPE 65 Query: 58 ------ILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P +D+ + E +E + R LPL+ +I + + + + Sbjct: 66 EGGWRAWVPWPHFIAEDLTLGNPEWLKEPKMVGLERVEFRLAPLPLMFQQISIPRINLTK 125 Query: 110 PHLNFYLSSKGVSNW-----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 P + + G +NW + ++ + + I G + DQ + Sbjct: 126 PTASLTRLADGRANWVFDFGPKDENAEPSKWQLDIGAIGFDQGNVSFDDQTLKTSMKVQI 185 Query: 165 LNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITAN--FPAKNKAIS 218 L F I+ S + G + + G + + + ++ + Sbjct: 186 DPLGKPIPFSEIVGKASAEKAGGAQDYAFGLKAQGRYKGQPVSGTGKIGGLLALQDASQP 245 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLS 273 +Q + L G L ++G L Sbjct: 246 FPLQADVRIADTHVVLAGTLTDPRNLGALDLRLRLSGASLGNLYPLTGVTLPDTPAYSTD 305 Query: 274 GNFKISDGNVRISRYKLQS--ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 G+ + + + + + Q S + V+ L+ + + + Sbjct: 306 GHLRANLQAAQGASFNYQGFNGKIGDSDIHGDLAFVASQPRPKLSGNLVSNQLLFK 361 >gi|295098202|emb|CBK87292.1| Uncharacterized protein involved in outer membrane biogenesis [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 608 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 43/378 (11%), Positives = 110/378 (29%), Gaps = 51/378 (13%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70 L V++ G + L ++ DFR RQ G ++ + G ++ H+ P S+ + Sbjct: 2 ILLVVLVAGLSALVLLVNPNDFRAYMVRQVEARSGYELKLDGPLRWHVWPQLSILSGRMS 61 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---- 126 + + + + +PLLS +++V + + + ++ V Sbjct: 62 LIAPGAAQPLVTADNMRLDVALIPLLSHQLQVEQVMLKGAVIQLTPQTEAVRQADAPVAP 121 Query: 127 -----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 D + + + V + E D+ + ++NL++ + Sbjct: 122 RENTLPDVPSDTGWSFDIGNLKVADSVLVF-QHEDDEQITVRNINLRMEQDANH------ 174 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 F N ++ +S+ + YP + Sbjct: 175 -----------------QATMEFSGRINRNQRDLNLSMNANVNASDYPHQLTADVQ---- 213 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 + + G + A + + + + ++ LQ+ + + Sbjct: 214 ------QLNWQLTGADLPAKGI---AGQGTMQAVWHEERKQLELNALNLQA----NDSAL 260 Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361 + V+ DE+ + + N + + + S Sbjct: 261 KGQASVTLDEKPKWVLDLQFDKLNLE-NLLPPQPVNATDEGATQVGQSQVTQSRPVISSN 319 Query: 362 DNSHDKENQENFSGDKMI 379 + D F+ D ++ Sbjct: 320 LDQPDYNGLRGFTADILL 337 >gi|325982615|ref|YP_004295017.1| AsmA family protein [Nitrosomonas sp. AL212] gi|325532134|gb|ADZ26855.1| AsmA family protein [Nitrosomonas sp. AL212] Length = 654 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 47/370 (12%), Positives = 114/370 (30%), Gaps = 36/370 (9%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIEG 85 +W R +Q + + + G + + P + + I+++ ++ Sbjct: 26 NWNWARAIVAQQISDFTDRDFTINGNLTVDWSLTPHIRLEQIQLENAAWSKQPNMLELAA 85 Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI---LEKI 142 L +R + + L+ G + ++ + +PH+ S +G +NW T + +E++ Sbjct: 86 LDVRIDLIELIKGRMLFPEIILTRPHIILQKSPQGEANWEFTADTGNPESKTDIPLIERL 145 Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV-IAEGTGNFDNKR 201 + GR+ D + + ++ + + + G Sbjct: 146 RITEGRLVYQD-------------FSVDTEIITTLATIKEATHEEEFTELYAEGKLKGHP 192 Query: 202 SAFKITANF--PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259 + A + I + L + + G + + F++ G + Sbjct: 193 LQINLKAGPLVALREADIPYPLILSLQTGKTRVKVKGTVIQPLQLKGLDLQFAIQGPNPE 252 Query: 260 LLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314 LL+ L RL G+ +IS Q + V E Sbjct: 253 LLSPVLGLPMPSLPPYRLEGDLSHHGHTWQISNLNGQVGDSD----LAGTISVKLSETIP 308 Query: 315 LNFSENGAESMHDLNETD-----FFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369 + DL++ + + + KK + + + D+S D + Sbjct: 309 F-IQADLRSKTIDLDDIGPLIGLAPDTGAGETASSAQKKKAKEETESPFVLPDDSIDFKE 367 Query: 370 QENFSGDKMI 379 + + D + Sbjct: 368 LQTINADITL 377 >gi|313500839|gb|ADR62205.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 688 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 42/356 (11%), Positives = 102/356 (28%), Gaps = 32/356 (8%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 R+L+ VL V DW + + + + + A+ G + +H Sbjct: 6 RILVWTLASLLTVLAILVVVIATFDWNRVKPLLNEKVSEALHRPFAINGNLAVHWRTEPE 65 Query: 58 ------ILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P +D+ + E +E + R LPL+ +I + + + + Sbjct: 66 EGGWRAWVPWPHFIAEDLTLGNPEWLKEPKMVGLERVEFRLAPLPLVFQQISIPRINLTK 125 Query: 110 PHLNFYLSSKGVSNW-----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 P + + G +NW + ++ + + I G + DQ + Sbjct: 126 PTASLTRLADGRANWVFDFGPKDENAEPSNWQLDIGAIGFDQGNVSFDDQTLKTSMKVQI 185 Query: 165 LNLQ----ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAIS 218 L S + + + + + G + + + ++ + Sbjct: 186 DPLGKPIPFSEIVGKTSAEKAGGAQDYAFALKAQGRYKGQPVSGTGKIGGLLALQDASQP 245 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLS 273 +Q + L G L ++G L Sbjct: 246 FPLQADVRIADTHVVLAGTLTDPRNLGALDLRLRLSGASLGNLYPLTGVTLPDTPAYSTD 305 Query: 274 GNFKISDGNVRISRYKLQS--ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 G+ + + + + + Q S + V+ L+ + + + Sbjct: 306 GHLRANLQAAQGASFNYQGFNGKIGDSDIHGDLAFVASQPRPRLSGNLVSNQLLFK 361 >gi|197284547|ref|YP_002150419.1| assembly protein [Proteus mirabilis HI4320] gi|194682034|emb|CAR41532.1| putative outer membrane assembly protein [Proteus mirabilis HI4320] Length = 643 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 103/356 (28%), Gaps = 51/356 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R L L L V+L G T+ L I+ DFR + G K+ ++ ++ H+ P Sbjct: 1 MKRFLTTLAILLVVILAGLTTLVLLINPNDFRGYLVERVEKQSGYKLTLQDDMRWHVWPK 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + E PLLS ++ V ++ + + SK + Sbjct: 61 LSIISGKMSLTAPGAEQPLITADNMRLDVELWPLLSHQLEVKEVMLKGAVVRQTPESKAI 120 Query: 122 SNWFQRKSTMDMI-----------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + + + K+ + I + + L D+NL + Sbjct: 121 PKITPPSVANEDSTRPIIEPKTNRWQLNIAKVRISDSLIIW-QTKGGEQLNLRDINLLLK 179 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 N + +++ YP Sbjct: 180 TDDK-----------------------KQINLEMSTKINRDRRELMLNVVANADMSGYPY 216 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 I I ++++G + L+ +F I + +V + Sbjct: 217 QISGN----------IAQLDYALSGIGLPAQGISG-----NLTSDFNIKNDSVNVIALN- 260 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346 + + + ++N G + + + + + L Sbjct: 261 NLNMTANESQLQGSITAELAKKNRYQVELTGDTLNLNTLLPELAQPNSSETASLTL 316 >gi|288961565|ref|YP_003451875.1| hypothetical protein AZL_c00380 [Azospirillum sp. B510] gi|288913845|dbj|BAI75331.1| hypothetical protein AZL_c00380 [Azospirillum sp. B510] Length = 678 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 102/344 (29%), Gaps = 39/344 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R L + ++ G + DW D R R+A+ + +++A+ G +++ + Sbjct: 10 RWTGYALLGVAGLIAAGIAAMLALFDWNDARGVIARRASAALNREVAIDGDLRVRLGDPI 69 Query: 63 SVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + +R+ + ++I L PLL G+ + ++ I P L + KG Sbjct: 70 RIHLEGLRVANADWARDGSMAEIRALDATLRPWPLLRGDWELPEVNIQGPTLILEKNGKG 129 Query: 121 VSNWFQRKS------------TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 +NW D ++ ++ + GR++ D S D++ Sbjct: 130 EANWEFGPPTLEKEVAKRAATPDDRGDIPVIGRLAIAEGRLRYRDPTSGI-----DIDNA 184 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP--AKNKAISLKIQLFPL 226 I + V G G+F + ++ +++ Sbjct: 185 IDTATGGDGGDV--------VRLTGKGSFAGRPFTLAAEGGSLLYLRDDPKPYPLKVEAA 236 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDG 281 + G++ K + GD + L + +SG+ Sbjct: 237 VGATRGHIEGSVAEPVKLEGVDLSVRLGGDDMAEIFPILGIPAPKTRPYSISGHLGREGT 296 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES 324 + + V + +L Sbjct: 297 VWSFRGMNGKVGESD----LSGDLLVDTGADRPMLRADLTSNRL 336 >gi|295687639|ref|YP_003591332.1| AsmA family protein [Caulobacter segnis ATCC 21756] gi|295429542|gb|ADG08714.1| AsmA family protein [Caulobacter segnis ATCC 21756] Length = 669 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 111/345 (32%), Gaps = 33/345 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61 RR LIG+G + + + DW R R A+ + +++A+ G +++H F Sbjct: 6 RRALIGIGSALA-LAAAVIAFLVIFDWNWLRGPIGRYASAQMQREVAITGDLRVHPWSFS 64 Query: 62 PSVFFKDIRIDQKEDGSF-------ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 P +RI Q + ++++ ++++ + LPLL G++ + + +D+P + Sbjct: 65 PKAEAYGVRIGQPAWAAKVDPEAGQMAQVQRIALQIKILPLLRGDVILPFLALDKPDVRL 124 Query: 115 YLSSKGVSNWFQRKSTMDMIHNV-ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 G +NW D + +++ + G+++ D++ ++ Sbjct: 125 LRDKDGKANWTFGARKSDKPLKLPAVQRFVINEGKLRFDDRQRGTLFV------------ 172 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI-SLKIQLFPLAYPIII 232 ++ + G + EG G + +I+ A I Sbjct: 173 GSVNAQERAGDRGGRFVLEGNGTLNRSAFVAEISGGPLLNISPSRPYPFDAQVRAGATRI 232 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISR 287 G + + +V+G L+ R+SG + Sbjct: 233 VAHGQITRPFDLGRFETDLTVSGADLNRLHDLTGLTLPNTPPYRVSGRMVRKGPRYDFQK 292 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETD 332 Q + V E D ++ Sbjct: 293 LTGQIGDSD----IAGDLFVLTGRERPY-LEAELRSKRLDFDDLG 332 >gi|332766411|gb|EGJ96620.1| asmA family protein [Shigella flexneri 2930-71] Length = 606 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 49/379 (12%), Positives = 117/379 (30%), Gaps = 59/379 (15%) Query: 14 SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73 V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P S+ + + Sbjct: 2 VVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQLSILSGRMSLTA 61 Query: 74 KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS---------NW 124 + + + + + LPLLS ++ V + + + ++ V + Sbjct: 62 QGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAVRSEDAPVAPRDN 121 Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 + D + + + V + E D+ + ++ LQ+ + S Sbjct: 122 TLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQDPQHRGS------ 174 Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 F N ++ ISL + YP + Sbjct: 175 -----------------FEFSGRVNRDQRDLTISLNGTVDASDYP----------HDLTA 207 Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 I + + G ++ + ++ S + ++ L + + + + Sbjct: 208 AIEQINWQLQGADLPKQGIQ---GQGSFQSQWQESHKRLSFNQISLTA----NDSTLSGQ 260 Query: 305 TKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEE 360 +V+ E+ + D LNET E + S E Sbjct: 261 AQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLPRPVISSRIDEP 320 Query: 361 KDNSHDKENQENFSGDKMI 379 + + F+ D ++ Sbjct: 321 AY-----QGLQGFTADILL 334 >gi|167035903|ref|YP_001671134.1| AsmA family protein [Pseudomonas putida GB-1] gi|166862391|gb|ABZ00799.1| AsmA family protein [Pseudomonas putida GB-1] Length = 688 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 41/356 (11%), Positives = 98/356 (27%), Gaps = 32/356 (8%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 R+L+ +L V DW + + + + + A+ G + +H Sbjct: 6 RILVWTLTSLFTLLAILVVVIATFDWNRVKPLLNEKVSEALHRPFAINGNLAVHWRTEPE 65 Query: 58 ------ILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P +D+ + E + + R LPL+ +I + + + + Sbjct: 66 EGGWRAWVPWPHFIAEDLTLGNPEWLKEPDMVGLARVEFRLAPLPLVFQQISIPRINLTK 125 Query: 110 PHLNFYLSSKGVSNW-----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 P N + G +NW + ++ + + I G + DQ + Sbjct: 126 PTANLTRLADGRANWVFDFGPKDENAEPSKWQLDIGAIGFDQGNVSFDDQTLKTSMKVQI 185 Query: 165 LNLQ----ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAIS 218 L S + + + + + G + + + ++ + Sbjct: 186 DPLGKPIPFSDIVGKASAEKAGAAQDYAFGLKAQGRYKGQPVSGTGKIGGLLALQDASQP 245 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLS 273 +Q + L G L ++G L Sbjct: 246 FPLQADVRIADTHVVLAGTLTDPRNLGALDLRLRLSGASLGNLYPLTGVTLPDTPAYSTD 305 Query: 274 GNFKISDGNVRISRYKLQS--ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 G + + + + Q S + V+ L+ + + Sbjct: 306 GRLSANLHAAQGASFNYQGFNGKIGDSDIHGDLAFVASQPRPKLSGKLVSNQLLFK 361 >gi|327394460|dbj|BAK11882.1| protein AsmA precursor [Pantoea ananatis AJ13355] Length = 607 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 43/332 (12%), Positives = 98/332 (29%), Gaps = 47/332 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RRV+ L L VV+ G + + ++ DFR +Q G ++ + G ++ H+ P Sbjct: 1 MRRVITTLAILLVVVVAGLTALVMLVNPNDFRSYMVQQVEQRSGYQLTINGDLRWHVWPK 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + LPLLS ++ V + + + S Sbjct: 61 LSILAGRMSLTAPGAAQPVVSADNMRLDVNLLPLLSHQLSVSQVMLKNAVVRVTPESTAQ 120 Query: 122 SNWFQR------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 + + + K+ + + +LNL + + Sbjct: 121 VPQNAPRGPHNSEPASSDRWSFDIGKLQLMDSLFIWQQP-GGDAFTFRNLNLNMEQDQSS 179 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 + + + + I+LK Q YP + Sbjct: 180 LAT-----------------------INLSTSLTRNQRTAMINLKGQFDKSQYPHQLSGQ 216 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 ++++G ++ + GN+ V +S KL + Sbjct: 217 LE----------QLDYALSGASLPPQGIKGTL---SFQGNWNGDRNTVALSDLKLNA--- 260 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + + L+ + D Sbjct: 261 -NDSVLSGSAQGDLTAPQKLSLDLHATSLDMD 291 >gi|209544790|ref|YP_002277019.1| AsmA family protein [Gluconacetobacter diazotrophicus PAl 5] gi|209532467|gb|ACI52404.1| AsmA family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 674 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 52/396 (13%), Positives = 109/396 (27%), Gaps = 46/396 (11%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR LIGLG L ++++V W F + +A+ + ++ + + + + Sbjct: 16 LRPWLIGLGSLVALIVVLILV----WSWDWFIPLVDSRASAALHRRTTIA-HLHVRLGRI 70 Query: 62 PSVFFKDIRIDQKEDG----SFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYL 116 +V D+ IDQ + ++ + L G + + + +D P + Sbjct: 71 VTVTADDLTIDQPAGFEDEKQPFATARHATVAIDAWDWLRHGTLSLPLIALDGPRADIVR 130 Query: 117 SSKGVSNWFQRKSTMDMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 G N +TM + ++ + G +++ D Sbjct: 131 RKDGPGNATTSNTTMGPPAQPGAPATKWPTIGELRITDGALRVADAPLRAEM-------- 182 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPL 226 A L+ P + +G ++ + TG + + + A + + Sbjct: 183 --AATLHTTPPNPAEGDRGRIVVDATGRYAAQPMTLHAVGGALLGLMDPAHPYPLDVTVR 240 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDG 281 P L G + G LL L+G S Sbjct: 241 NGPTTAALAGTIDDPFHFAGARLTLHFNGPDMSLLYPLTGIPIPVTPAYDLTGRLDYSRR 300 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341 +R + + + + V + DL + F +K Sbjct: 301 MIRFTDLRGRLGSSD----IGGAISVDPHQAVPF-VDATLHSHRVDLVDLGGFIGARRKG 355 Query: 342 KNDDLKKDDIQYSVNKKEE--KDNSHDKENQENFSG 375 Q + K D + + Sbjct: 356 AKT----PAEQAAEAKDPNVLPDTPVNIPKLRAINA 387 >gi|262040089|ref|ZP_06013346.1| AsmA suppressor of OmpF assembly mutants [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042561|gb|EEW43575.1| AsmA suppressor of OmpF assembly mutants [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 612 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 107/335 (31%), Gaps = 53/335 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+L L L +V++ G ++ L ++ DFR + G ++ + G ++ H+ P Sbjct: 1 MRRILTTLMILLAVIVAGLTSLVLLVNPNDFRAYMVHEVAERSGYQLDLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS +++V + + + ++ V Sbjct: 61 LSILSGRMTLTARGAEEPVIRADNMRLDVALLPLLSHQLQVKQVMLKGAVIQLTPKTEAV 120 Query: 122 ---------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + ++ V + E+ + + D+ LQ+ Sbjct: 121 RDSSAPVVPHDNTLPLAPEDRGWSYDVRQLQVAD-SVLFFQHENGEQVTVRDIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + +V G N ++ A+S + YP + Sbjct: 180 ENHR----------ATVDFSGRVN----------------RDLALSFSATVQGGDYPHSL 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + + G + + L +++ D +R L Sbjct: 214 KADFT----------QLSWQLRGAELP---PDGINGQGSLQASWQEDDKTLRFDNLNL-- 258 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + V + + + D Sbjct: 259 --MANRSTVTGSGSVVLGDRPDWSLDLHATTLDLD 291 >gi|54308365|ref|YP_129385.1| AsmA protein [Photobacterium profundum SS9] gi|46912793|emb|CAG19583.1| Hypothetical AsmA protein [Photobacterium profundum SS9] Length = 589 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 46/424 (10%), Positives = 108/424 (25%), Gaps = 63/424 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L L + V++VG + +D F+ Q G+ + + G I P Sbjct: 1 MKKLLYVLLAIVLVIVVGIGALLALVDPNQFKPLLSEQVKKATGRDLVINGDISWRFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + K+ + +PL S + + ++ ++ + Sbjct: 61 VGFSLGETEFKNPQGFAEADLVKLGSAELSVSVMPLFSQHLEIGNISLNDARVFIQTRKD 120 Query: 120 GVSNWF----------------------------QRKSTMDMIHNVILEKIHVKGGRIKI 151 GVSN + + L + V ++ Sbjct: 121 GVSNLDGLGEQAAVEGTVTEDTNGTSSEPAIDQPSVEDEPMQPWTISLAGVEVVNASAEV 180 Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS--------- 202 D ++ + LN ++ + + D + T D++ Sbjct: 181 RDDKAGTATIIDSLNFKLDTFSPGEWTQANFDITGKNTELSFTAKGDSQLLIATDYKSGE 240 Query: 203 ------------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN--LFWNE 242 + + + ++ + D G + Sbjct: 241 LKALNVTASAKDSVNDIQSLVLGVDHFKVGDWANITFAAKGQIPDLAFDANGATRFKISA 300 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 + K L K L+ + + + + + Sbjct: 301 DYNLAELDKLTLSSDLKGSTLPRPEMKVGLNADATYDVAKGLATLSRFE--TSIDELVLN 358 Query: 303 NKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEE 360 K ++ F N D L ++ K+ +V+K EE Sbjct: 359 GKGSFKNAIIPVIRFDVNSDNIDLDAFLGTASSAKDNAKEEIGSAPSTGGETSTVSKSEE 418 Query: 361 KDNS 364 D S Sbjct: 419 PDLS 422 >gi|218781545|ref|YP_002432863.1| AsmA family protein [Desulfatibacillum alkenivorans AK-01] gi|218762929|gb|ACL05395.1| AsmA family protein [Desulfatibacillum alkenivorans AK-01] Length = 714 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 57/412 (13%), Positives = 126/412 (30%), Gaps = 49/412 (11%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + + L + + G V +D F+ D E G+K+ + G +++ I Sbjct: 7 IKWTIGIIAALVVLCVGGIAYVLSTLDLNQFKADIETNVQNATGRKLNLAGDVELKIGFS 66 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 P++ + + E G + I+ L ++ LPLLSG +++ + + +P + + Sbjct: 67 PALTVESVSFANAEWGSQPNLASIDRLEVQVAVLPLLSGAVKIKRLILIKPEILIETNKD 126 Query: 120 GVSNWF--------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159 G SN N+ +E+ ++ R+ D +S Sbjct: 127 GKSNLDFGDSEKTAASSESSPKEATEPSSGQTGSGLNIDVEEFVLQDARLTYKDGQSGSS 186 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAI 217 L + + + +G ++ + A N Sbjct: 187 QEL------------ALSLVKASLDSANKLTLSVSGAYNGQPFEVNGETGGLEDAMNPKA 234 Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RL 272 + + A ++ + G + + F+ G LN A L Sbjct: 235 DWPLNITAKAGGAVVTVKGAIQDLNGPAGIALAFNAEGKSLADLNALSGASLPDLGKYAL 294 Query: 273 SGNF-KISDGNVRISRYKLQSILPNSSTDEDNKTKVS-QDEENLLNFSENGAESMHDLNE 330 SG + +I+ K Q + + + + + S Sbjct: 295 SGKLADAGSKSYKITGLKGQLGESD----ISGEAALDMSGKRPNIVLSLTSKALDLRPFL 350 Query: 331 TDFFE--EEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMIL 380 D + E+ K + KK + N D + + + + + L Sbjct: 351 PDKSQEVEKPKSKPAAEPKKKSDRVLPNDPLPTDLLLLADAKGDIKVETVQL 402 >gi|304397438|ref|ZP_07379316.1| AsmA family protein [Pantoea sp. aB] gi|304355056|gb|EFM19425.1| AsmA family protein [Pantoea sp. aB] Length = 607 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 52/386 (13%), Positives = 112/386 (29%), Gaps = 49/386 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++RV+ L L VV+ G + L ++ DFR +Q G ++ V ++ H+ P Sbjct: 1 MKRVITTLAILLVVVVTGLSALVLLVNPNDFRAYMVQQVEQRSGYRLEVSNDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + E + + + PLLS ++ V + + + S Sbjct: 61 LSILAGRMSLTAPGATQPLVSAENMRLDVDLWPLLSHQLSVSQVLLKNAIVRVTPDSSAQ 120 Query: 122 S-------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 ++ + + K+ V + D+ Y DLN+ + Sbjct: 121 PARNAPQGPRDAEPASPSTGWSFDIAKLRVADSLLIWQQPGGDE-YNFRDLNITMDQDAN 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 + + + T +N ++LK QL YP + Sbjct: 180 KLAT-----------------------LSLSTTLMRNQRNATLNLKGQLDAAQYPHRL-- 214 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 + +S++G ++ S L G + S +L + Sbjct: 215 --------TGQLQQLDYSLSGADIPSQGIKGSL---SLQGEWNGDRQQFSFSGLQLTA-- 261 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-LNETDFFEEEEKKNKNDDLKKDDIQY 353 + + + L + D L + E + I Sbjct: 262 --NDSTLTGQGSGHVLPPQQLALDLKASNLNLDNLLTSAPVSEAPGAQHATVARSPVIAA 319 Query: 354 SVNKKEEKDNSHDKENQENFSGDKMI 379 + +D + + + Sbjct: 320 PRERTNADSPLNDMDLALKLQANNAV 345 >gi|104783840|ref|YP_610338.1| hypothetical protein PSEEN4906 [Pseudomonas entomophila L48] gi|95112827|emb|CAK17555.1| conserved hypothetical protein, AsmA family [Pseudomonas entomophila L48] Length = 686 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 40/359 (11%), Positives = 99/359 (27%), Gaps = 38/359 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58 R+L+ + +L V DW + + + + + A+ G + ++ Sbjct: 6 RILLWTFATLATLLAILVVVIATFDWNRVKPLLNEKVSEALHRPFAINGNLAVNWRTEPE 65 Query: 59 -------LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P +D+ + + +E + R LPL+ I + + + + Sbjct: 66 ERGWRAFVPWPHFIAEDLTLGNPDWLKEPRMVGLERVEFRLSPLPLIVQRISIPRIDLVK 125 Query: 110 PHLNFYLSSKGVSNW-----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 P + + G +NW + ++ + + I G + DQ + Sbjct: 126 PSASLVRLADGRANWVFDFGPKDENAPPSKWELDIGAIGFDQGNVSFDDQTLKTSMKVQV 185 Query: 165 LNLQ----ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAIS 218 L S + + + + G + + A ++ + Sbjct: 186 DPLGKPIPFSDIVGKERAEKVGKAQDYAFGFKAQGRYKGQAVAATGKIGGLLALQDASQP 245 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLS 273 +Q + L G L +++G L Sbjct: 246 FPLQADARIGDTRVVLAGTLTDPRNLGALDLRLALSGSSLGNLYPLTGVTLPDTPAYSTD 305 Query: 274 GNFKIS-----DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 G+ + R + + + D V+ L+ + + Sbjct: 306 GHLTANLHDPAGAQFRYEGFNGKIGDSDIHGDL---AFVASQPRPKLSGKLVSNQLLFK 361 >gi|114327461|ref|YP_744618.1| asmA family protein [Granulibacter bethesdensis CGDNIH1] gi|114315635|gb|ABI61695.1| asmA family protein [Granulibacter bethesdensis CGDNIH1] Length = 665 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 52/395 (13%), Positives = 117/395 (29%), Gaps = 57/395 (14%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 ++ LI F V GA + L DW FR Q + +G+ +++ +H Sbjct: 8 KKWLISTAF----VCGGAVALILLWDWNWFRPLVASQLSQALGRNVSLT-HFNLHPGRIT 62 Query: 63 SVFFKDIRIDQKEDGS-----------------FESKIEGLSMRAEFLPLLSGE-IRVFD 104 SV + +R+ Q + ++IE L + + L L I + Sbjct: 63 SVELEGVRVAQPDGFPMPPSSDGKQSGQQNTENEFARIEHLEIEVDVLRYLQEHLIAIPR 122 Query: 105 MYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI--------LEKIHVKGGRIKIIDQES 156 + + +P + + +NW + + + +H++GG I D Sbjct: 123 IALTKPAFHLIRTEDNRNNWTFPSGKNEDKSDADTHKRASPEIGTLHIEGGSILFQDAPL 182 Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKN 214 ++ ++ S + K ++IAE G++ + + A + Sbjct: 183 KADVSIT-------------LATGSDSTGKNALIAEAKGSYAGQPMTGGLVAGDVLTLRQ 229 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR--- 271 + L P L G + ++ G L + Sbjct: 230 DHTVYPLSLHLENGPTKGSLRGTIADPLHFAGADLTLTLKGADMAALYPLTGIPIPQTPP 289 Query: 272 --LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 + G+ ++ +R + + + V+ + + + DL+ Sbjct: 290 YDIEGHMTYAEQRIRFENFTGHVGSSD----LNGSIIVAPSGARPV-VTADLHSRKVDLD 344 Query: 330 ETDFFEEEE-KKNKNDDLKKDDIQYSVNKKEEKDN 363 + F K + + + Sbjct: 345 DLGGFIGSTPGKTTTPGQTLEQKREVAKAEASPQL 379 >gi|187927817|ref|YP_001898304.1| AsmA family protein [Ralstonia pickettii 12J] gi|187724707|gb|ACD25872.1| AsmA family protein [Ralstonia pickettii 12J] Length = 765 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 99/358 (27%), Gaps = 59/358 (16%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58 ++ +GL V++ A L DW + + + +G+ A+ G + + Sbjct: 6 KLALGLVITPVVIVAAAVFFVLTFDWNRAKPYLNDRISQAIGRPFAINGDLILTWKKPQG 65 Query: 59 -------LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P + DI + E + I L+ E LPLL+ I + + +D Sbjct: 66 ESGWRAYVPWPRLIANDITVGNPEWAKQPNVATIHQLTFVLEALPLLAHRIVIPSVTLDT 125 Query: 110 PHLNFYLSSKGVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQE-----SDQ 158 P + + +NW + L +I G + + D + Sbjct: 126 PAIALERDKQHRNNWTFNLAGSEGDDKKPSDWKLDLREIAFSKGSLALDDDIKRIHLAAT 185 Query: 159 VYFLSDLNLQISARFLNII-------------------------SPLSIDSIKGSVIAEG 193 + + + L +A I +P + +G Sbjct: 186 IDTVDNQALYSAASGAAIKSADQPTTAPTASGASASESAAQTPAAPDPQQPYGIAWTLKG 245 Query: 194 TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253 T N K ++ +Q IDL G L + Sbjct: 246 TYNNATINGTGKAGGVLRLQDAQRPYPLQADVTVGKTRIDLAGTLTNPASLTALDLRLHL 305 Query: 254 AGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 +G L RL G + R ++ + + Sbjct: 306 SGASMAQLYPLTGVVLPDTPPFDTRGRLIGELRRQGSTWRYEKFTGRVGGSDLGGTLT 363 >gi|292490054|ref|YP_003532948.1| hypothetical protein EAMY_3595 [Erwinia amylovora CFBP1430] gi|292901066|ref|YP_003540435.1| exported protein [Erwinia amylovora ATCC 49946] gi|291200914|emb|CBJ48051.1| putative exported protein [Erwinia amylovora ATCC 49946] gi|291555495|emb|CBA24006.1| Uncharacterized protein yhjG [Erwinia amylovora CFBP1430] Length = 685 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 109/381 (28%), Gaps = 40/381 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 +V+ +G +F +++V T DW + R+ + + + A++G + + Sbjct: 6 KVISWIGGIFLLLVVVTVTAIALFDWNRLKPTINRKVSAEINRPFAIRGDLGVSWQRNRG 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D ++ + L LLS +I + + + Q Sbjct: 66 EPGWRSWVPWPQVHAQDIMLGNPPDIPDVTMVHLQRVEATLSPLALLSRQIYLPWISLQQ 125 Query: 110 PHLNFYLSSKGVSNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P ++ G +NW Q+ + L+ I G + D + Sbjct: 126 PQARLVQTANGKNNWTFNLAGSDDQQAGKGSSAWSFRLDNIAFDRGTVSYRDAINQADVQ 185 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVI--AEGTGNFDNKRSAFKITAN--FPAKNKAI 217 + L + + + +G + N++ + + +++ Sbjct: 186 VMVDPLGKPVPYGQLAGGDDKQKGAADFVFGWRASGTYHNEKLSGEGKTGGMLSLRSQNT 245 Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS------- 270 I + + G + +GD L Sbjct: 246 PFPIAADVRNGTTRVRIAGTVRDPLNMGAVDIRLRFSGDTLANLYGLTGVLLPETPPYET 305 Query: 271 --RLSGNFKISDGN-VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES-MH 326 L+ F+ +G R + + L + + M Sbjct: 306 DGHLTARFQQPNGAEFRYQNFNGHIGDSDIRGSL---AYRQGKPRPELTGTLESLQLRMA 362 Query: 327 DLNETDFFEEEEKKNKNDDLK 347 DL + K K Sbjct: 363 DLGPLIGVNSGKDSAKTARAK 383 >gi|123442996|ref|YP_001006971.1| putative assembly protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089957|emb|CAL12814.1| putative exported protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 615 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 43/388 (11%), Positives = 108/388 (27%), Gaps = 55/388 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+L L L V++ G + L ++ DFR +Q G + ++G ++ H+ P Sbjct: 1 MRRLLTTLIILLVVLVAGMSALVLLVNPNDFRAYMVKQVERKSGYHLQLEGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + E + + + PLLS ++ V + + + S+ Sbjct: 61 LSIIAGRMALTAPGAATPVVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLTPDSEAQ 120 Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + + K+ V + ++DQ + D+NL++ Sbjct: 121 QQPGAPVAPTGNAPVDEQRAWKLDINKVQVADSLLIWQRTDNDQ-VNVRDINLELQQDAQ 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 N ++ S+ + YP Sbjct: 180 R-----------------------QIHVTLASRINRNQRDVTFSMVADVDMSHYPQQF-- 214 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 I + + G + + + L +++ + ++ + Sbjct: 215 --------GANISQFSYKLEGADIPVGGVS---GEGVLQASYQHDIQQLLLNELSFTA-- 261 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKND-DLKKDDI 351 ++ K + + D + + + I Sbjct: 262 --NNNQLTGSAKATFGPVPEYVINLAADNLNLDAIFGWKPQNTVSTEDSAKPATVTAPVI 319 Query: 352 QYSVNKKEEKDNSHDKENQENFSGDKMI 379 + D + +F+ + Sbjct: 320 AIQADDDVG----QDLQALRDFTAQVTL 343 >gi|332704295|ref|ZP_08424383.1| AsmA family protein [Desulfovibrio africanus str. Walvis Bay] gi|332554444|gb|EGJ51488.1| AsmA family protein [Desulfovibrio africanus str. Walvis Bay] Length = 930 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 52/392 (13%), Positives = 124/392 (31%), Gaps = 39/392 (9%) Query: 6 LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65 LI G L ++V+V A +P+ +D ++ ++ G++ AV+G I + + P+ V Sbjct: 9 LIIFGVLVALVIVAALVLPMVVDPNQYKGRIAQEVQKATGREFAVEGDIDLSVFPWLGVE 68 Query: 66 FKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 + + E +E +R + LPLLS E+ V + I P + +G +N Sbjct: 69 IGRMHMANAEGFGDEPMIAVENAEVRVKLLPLLSRELIVDTVVIQNPVIRLAKDEQGRTN 128 Query: 124 W-------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 W ++ + V L + V+ G + D ++ Y + + Sbjct: 129 WQDILDHMERQAAEKPAEPEQPQEPGASPLQKVELAGLEVENGLLVWSDMQAKASYEVRE 188 Query: 165 LNLQISARFLNII---SPLSIDSIKGSVIAEGTGNFD-------NKRSAFKITANFPAKN 214 LN+ + + ++ + A G + ++++A N Sbjct: 189 LNVDVGELSMEAQPFPVSVNCAFVASQPQASGNLELNSVITLMLDQKTARAERTNLKLNI 248 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274 + + + + + + N + Q + + +LE +++ R + Sbjct: 249 DKLVQQAEGSTQSVTGRLAVAANAVADWGQGVADIQGLKLTSDLR-ADLESASQGGRATQ 307 Query: 275 NFKISDG-------NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 ++ + + + ++ + Sbjct: 308 KISAQSTVAADAVVRWVEGLARINGLALTTDYTVNMADSAAKAAGPQSIAGHVELVGNTE 367 Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359 N T + + N D + Sbjct: 368 ANWTKSVAQVDGLKVNTTFTLDQPASQAGSQP 399 >gi|330501812|ref|YP_004378681.1| AsmA family protein [Pseudomonas mendocina NK-01] gi|328916098|gb|AEB56929.1| AsmA family protein [Pseudomonas mendocina NK-01] Length = 685 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 48/406 (11%), Positives = 120/406 (29%), Gaps = 46/406 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R+++ L +F +++ + DW R Q + + + A++G +++ Sbjct: 5 RKLMGALFAIFLLLVAALMLFLVLFDWNRARPLINEQVSAALNRPFAIEGDLRVTWQREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P+P + +R+ + G ++ + +R LPLL + + + + Sbjct: 65 GQQGLSAWVPWPHFAAEHLRLGNPDWAQGDTFVSLDRVRLRLSPLPLLWKTVSIPSIELG 124 Query: 109 QPHLNFYLSSKGVSNW-------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P + + G +NW S + + I G++K+ D+ S+ V Sbjct: 125 APAADLQRLADGRANWVFDLGREQTDGSEEPSAWTLDIGTIAFDKGQVKLDDKLSNTVLE 184 Query: 162 LSDLNL--------QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213 L + ++ + + + + G+F + Sbjct: 185 ALIEPLGEPIPFAEIVGKSTAERLAESDVSAQDYAFAWQTKGSFRGQSLTGNGKVGGLLA 244 Query: 214 --NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS- 270 + + +Q I + G+L + +AG L Sbjct: 245 LHDASQPFPLQADVRIGSTRIRVAGSLTDPQNLGALDLRLQLAGASLGHLYPLTGVTLPD 304 Query: 271 --------RLSGNF-KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321 RL + R + + + D V++ L+ Sbjct: 305 TPPYSTDGRLQADLRDADGATFRYLGFNGRIGDSDIHGDLT---FVARQPRPKLSGRLTS 361 Query: 322 AESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + ++ + + + D Q + + D+ Sbjct: 362 NQ--LLFSDLAPLIGADSSADKRERGERDTQPANKALPISEFRTDR 405 >gi|162149552|ref|YP_001604013.1| outer membrane biogenesis protein [Gluconacetobacter diazotrophicus PAl 5] gi|161788129|emb|CAP57733.1| putative outer membrane biogenesis protein [Gluconacetobacter diazotrophicus PAl 5] Length = 674 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 52/396 (13%), Positives = 110/396 (27%), Gaps = 46/396 (11%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR LIGLG L ++++V W F + +A+ + ++ + + + + Sbjct: 16 LRPWLIGLGSLVALIVVLILV----WSWDWFIPLVDSRASAALHRRTTIA-HLHVRLGRI 70 Query: 62 PSVFFKDIRIDQKEDG----SFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYL 116 +V D+ IDQ + ++ + L G + + + +D P + Sbjct: 71 VTVTADDLTIDQPAGFEDEKQPFATARHATVAIDAWDWLRHGTLSLPLIALDGPRADIVR 130 Query: 117 SSKGVSNWFQRKSTMDMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 G N +TM + ++ + G +++ D Sbjct: 131 RKDGPGNATTSNTTMGPPAQPGAPATKWPTIGELRITDGALRVADAPLRAEM-------- 182 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPL 226 A L+ P + +G ++ + TG + + + A + + Sbjct: 183 --AATLHTTPPNPAEGDRGRIVVDATGRYAAQPMTLHAVGGALLGLMDPAHPYPLDVTVR 240 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDG 281 P L G + G LL L+G S Sbjct: 241 NGPTTAALAGTIDDPFHFAGARLTLHFNGPDMSLLYPLTGIPIPVTPAYDLTGRLDYSRR 300 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341 +R + + + + V+ + DL + F +K Sbjct: 301 MIRFTDLRGRLGSSD----IGGAISVNPHQAVPF-VDATLHSHRVDLVDLGGFIGARRKG 355 Query: 342 KNDDLKKDDIQYSVNKKEE--KDNSHDKENQENFSG 375 Q + K D + + Sbjct: 356 AKT----PAEQAAEAKDPNVLPDTPVNIPKLRAINA 387 >gi|238793468|ref|ZP_04637093.1| hypothetical protein yinte0001_23740 [Yersinia intermedia ATCC 29909] gi|238727241|gb|EEQ18770.1| hypothetical protein yinte0001_23740 [Yersinia intermedia ATCC 29909] Length = 615 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 44/385 (11%), Positives = 110/385 (28%), Gaps = 55/385 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+L L L V++ G + L ++ DFR +Q G ++ ++G ++ H+ P Sbjct: 1 MRRLLTTLIILLVVLVAGMSALVLLVNPNDFRAYMVKQVEKKSGYQLQLEGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + E + + + PLLS ++ V + + + S+ Sbjct: 61 LSIIAGRTALTAPGAAAPVISAENMRLDVKLWPLLSHQLEVKQVMLKGAVIRLTPESEAQ 120 Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + + K+ V + ++DQ + D+NL++ Sbjct: 121 QQPDAPVAPSGNAPLNEQRAWKLDINKVQVADSLLIWQRTDNDQ-VNVRDINLELQQDAQ 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 + N ++ S+ YP Sbjct: 180 R-----------------------QVHISLSSRVNRNQRDVTFSMVADADMRHYPQQFSA 216 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 I + + G + + + L +++ + +++ + Sbjct: 217 N----------ISQFSYKLEGADIPVGGVS---GEGTLQASYQHDIQQLLLNQLSFSA-- 261 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKK-NKNDDLKKDDI 351 ++ + + E + D K+ + + I Sbjct: 262 --NNNQLTGTARATLGEVPDYVINLAADNLNLDTIFGWEPKSTVASKETPRQSAVTAPVI 319 Query: 352 QYSVNKKEEKDNSHDKENQENFSGD 376 + D + +F+ Sbjct: 320 AIQADDDVG----QDLQALRDFTAQ 340 >gi|146342441|ref|YP_001207489.1| hypothetical protein BRADO5600 [Bradyrhizobium sp. ORS278] gi|146195247|emb|CAL79272.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278] Length = 1275 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 60/421 (14%), Positives = 149/421 (35%), Gaps = 61/421 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ L+GL F + L+ A P F+DW FR FE +A I+G + V G + +LP Sbjct: 1 MQTTLLGLAIAFILALLAALIGPYFVDWNQFRPQFEAEAGKIIGVPVRVAGALDARLLPT 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P++ + + + + L + L+ GE + ++ I + L +KG Sbjct: 61 PTLRLRQVTFGGANHLGK-LRADKLDVEFSLGDLMRGEWKANELTIGGMAADLGLDAKGQ 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + + +++ ++ GR+ + D S L+D+ + Sbjct: 120 VDLPSASGR-FNLAALAIDRFNLT-GRVALHDAASRSTLELTDI-----------VFSGD 166 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + S+ GS+ +G + R F+++++ ++ + + + + P P++ D+ G + + Sbjct: 167 VRSLAGSLRGDGALSIRGGRYPFRLSSSQDKESNGLRVHLNIDPGERPVVADVEGLISFP 226 Query: 242 EKQPIYSGVFSV----------------AGDFSKLLNLEL-------------------- 265 + P + G ++ +G +L Sbjct: 227 NRSPKFEGALTLSSPPKEQVADKPAKDPSGKDPSGKDLSGKDQASRDQPSNDQPGRQAKS 286 Query: 266 ------SAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319 S R++ + + + ++ + S +L S Sbjct: 287 APATAPSGTPWRITTKIVGDQASAKFDQIEVSFGQEDRSLKFAGSGDAKFGAAPVLKASL 346 Query: 320 NGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 + D E ++++ L ++ + + + + F+ ++++ Sbjct: 347 AARQLDADKL-LAGDEVKDRRAIAPALVLPALRNWIAQLPTLPLPANVQ----FTTEQIM 401 Query: 380 L 380 L Sbjct: 402 L 402 Score = 36.8 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 31/259 (11%), Positives = 66/259 (25%), Gaps = 30/259 (11%) Query: 41 TLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEI 100 + + + ++G + + V ++ + GS + ++ ++ A + Sbjct: 476 SYRTQRPLRIRGDLNVAP---ERVAIDGLK-ADIDGGSVDGRVALINRPAGAGSRFEAAL 531 Query: 101 RVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 + + +D W S + L Sbjct: 532 KGDRLDLDAAMAMTRSLVGVTGEWPAEASVALDVGRAKLSG------------------Q 573 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 L L ++S I G V EG G FD + ++T A + + Sbjct: 574 ELRPLTARVSYDPKTIAVDQIKFGQSGGVTTEGVGRFDRADATGRLTLTSMAGSLK-EIT 632 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV----AGDFSKLLNLELSAKKSRLSGN- 275 + P A I L + A L +L G Sbjct: 633 ALVQPFAPQITARFDA-LATPAGAARLKLTLDLAKDPANADRSQAKAVLDLDAPQLKGQA 691 Query: 276 -FKISDGNVRISRYKLQSI 293 + +++ +I Sbjct: 692 TLTAKPSAAALRSFEVDAI 710 >gi|238795769|ref|ZP_04639283.1| hypothetical protein ymoll0001_16280 [Yersinia mollaretii ATCC 43969] gi|238720495|gb|EEQ12297.1| hypothetical protein ymoll0001_16280 [Yersinia mollaretii ATCC 43969] Length = 615 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 48/388 (12%), Positives = 114/388 (29%), Gaps = 61/388 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+L L L V++ G + L ++ DFR +Q G + ++G ++ H+ P Sbjct: 1 MRRLLTTLIILLVVIVAGMSALVLLVNPNDFRAYMVKQVEKKSGYHLQLEGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + E + + + PLLS ++ V + + + S+ Sbjct: 61 LSIIVGRTALTAPGATAPIVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVVRLTPDSEAQ 120 Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + + K+ + + ++DQ + DLNL++ Sbjct: 121 QQPGAPVAPSGSAPINEHRAWKLDINKVQIADSLLIWQRTDNDQ-VNVRDLNLELKQDDQ 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 N ++ S+ YP Sbjct: 180 R-----------------------QVHITLSSRVNRNQRDVTFSMVADADMRHYPQQYSA 216 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 I + + G + + + L +++ + +++ + Sbjct: 217 N----------ISQFTYKLEGADVPVGGVS---GEGTLQASYQSDIQQLLLNQLSFSA-- 261 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354 ++ K + + + D + KN + KD + S Sbjct: 262 --NNNQLTGSAKATLGDVPDYAINLAADNLNLD-------TIFGWQPKNAAVSKDASKQS 312 Query: 355 VNK------KEEKDNSHDKENQENFSGD 376 + ++D D + +F+ Sbjct: 313 AVTAPVIAIQADEDVGQDLQALRDFTAQ 340 >gi|318605000|emb|CBY26498.1| Asma protein [Yersinia enterocolitica subsp. palearctica Y11] Length = 615 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 47/390 (12%), Positives = 112/390 (28%), Gaps = 53/390 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+L L L V++ G + L ++ DFR +Q G + ++G ++ H+ P Sbjct: 1 MRRLLTTLIILLVVLVAGMSALVLLVNPNDFRAYMVKQVERKSGYHLQLEGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + E + + + PLLS ++ V + + + S+ Sbjct: 61 LSIIAGRMALTAPGAATPVVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLIPDSEAQ 120 Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + + K+ V + ++DQ + D+NL++ Sbjct: 121 QQPGAPVAPTGNAPVDEQRAWKLDINKVQVADSLLIWQRTDNDQ-VNVRDINLELQQDAQ 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 N ++ S+ + YP Sbjct: 180 R-----------------------QIHVTLASRINRNQRDVTFSMVADVDMSHYPQQF-- 214 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 I + + G + + + L +++ + ++ + Sbjct: 215 --------GANISQFSYKLEGADIPVGGVS---GEGLLQASYQHDIQQLLLNELSFTA-- 261 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-----LNETDFFEEEEKKNKNDDLKKD 349 ++ K + + D + E+ K Sbjct: 262 --NNNQLTGSAKATFGPVPEYVINLAADNLNLDAIFGWKRQNTVSTEDTTKPATVTAPVI 319 Query: 350 DIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 IQ + ++ D Q + + +I Sbjct: 320 AIQADDDVGQDLQALRDFTAQVTLTANNLI 349 >gi|317492493|ref|ZP_07950921.1| AsmA family protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919485|gb|EFV40816.1| AsmA family protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 622 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 49/392 (12%), Positives = 115/392 (29%), Gaps = 53/392 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L + L V+ VG + L ++ DFR ++ G ++ + G ++ H+ P Sbjct: 1 MRRFLTTIVILLVVLAVGMTALVLLVNPNDFRSYMTKEVQQRTGYELQLDGSLRWHVWPR 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + E + + PLLS ++ V + + + S Sbjct: 61 LSILSGRMSLTAPGAAQPVISAENMRLDVGLWPLLSHQLDVKQVMLKGAVIRLTPGSDAQ 120 Query: 122 S-------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 R+ + D+ + ++K+ V+ + + DQ + D+NL I Sbjct: 121 KPENSPIAPSGSRELSSDVAWKLNIKKVQVRDSLLIWQQDKDDQ-INMRDINLSIDQDSA 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 N ++ L + +YP Sbjct: 180 R-----------------------QASIELSSRINRNQRDLNFKLAANVDLSSYPQRYS- 215 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 + + + ++G + A + +++ + IS + + Sbjct: 216 ---------AVVSNFDYQLSGVGLPTSGI---AGMGSATVSYQQQPQQIDISNLLVTANQ 263 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-----LNETDFFEEEEKKNKNDDLKKD 349 + ++ + A D T+ + + L+ Sbjct: 264 SQLQGRIQG--AMQENGTSAYKVDLQSAALNLDNLFGWTPPTEGADGSANTAEQATLRSP 321 Query: 350 DIQ--YSVNKKEEKDNSHDKENQENFSGDKMI 379 S + E D + +++I Sbjct: 322 VTSNPESTAQVGEMAFLRDFTAELKIQANEVI 353 >gi|156936313|ref|YP_001440229.1| hypothetical protein ESA_04213 [Cronobacter sakazakii ATCC BAA-894] gi|156534567|gb|ABU79393.1| hypothetical protein ESA_04213 [Cronobacter sakazakii ATCC BAA-894] Length = 685 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 48/388 (12%), Positives = 110/388 (28%), Gaps = 45/388 (11%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 +++ + +F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KIISVVAGVFLLLVVVAIIIIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERNKD 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +D+ + D + + L LL+ + + + + Sbjct: 66 EPGWRSWVPWPHVHAEDVVLGNPPDIPQVTMIHLPRVEATLAPLALLTKTVYLPWIKFQK 125 Query: 110 PHLNFYLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 P S+ +NW + + L+ I GR+++ D S + Sbjct: 126 PDAQLIRLSEKTNNWTFDMKQSEGEAAQQPSSWSFRLDNILFDQGRVRVDDNVSRADVEI 185 Query: 163 SDLNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITAN--FPAKNKA 216 L F + + G ++++ K++ Sbjct: 186 LIDPLGKPLPFNEVTGDKDKKGNDKVGDYVFGLKARGTYNDQPLRGSGKIGGMLALKSEG 245 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS------ 270 +Q + + G + AG+ L Sbjct: 246 TPFPVQADLRSGDTRVAFVGTVNDPMNMGGVDLQLKFAGNSLGDLYELTGVLLPDTPPFE 305 Query: 271 ---RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQ-DEENLLNFSENGAESM 325 RL G+V + + + SQ L + Sbjct: 306 TDGRLVAKINSDKGSVYDYRGFNGRIGESD----IHGSLTYSQRKPRPKLEGDLESRQLR 361 Query: 326 H-DLNETDFFEEEEK--KNKNDDLKKDD 350 DL + K+KN + KK + Sbjct: 362 LADLGPLIGVDSGAGAEKSKNSEQKKGE 389 >gi|312114604|ref|YP_004012200.1| AsmA family protein [Rhodomicrobium vannielii ATCC 17100] gi|311219733|gb|ADP71101.1| AsmA family protein [Rhodomicrobium vannielii ATCC 17100] Length = 1213 Score = 136 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 61/326 (18%), Positives = 113/326 (34%), Gaps = 17/326 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R+L L +++ AFTVP F+DW R D E A+ + G+KI + G I I +LP Sbjct: 1 MGRLLATFATLLVLLIGAAFTVPAFLDWNALRPDIEEAASTLFGQKIRIVGDIDIALLPE 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P V I D E L + L+ G + + + +P + + +G Sbjct: 61 PHVRAAKIATDPAPGDKLALSAEALDLSLSLQGLIGGHVEASRLKLVRPVVIVQAARRGA 120 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + + + + + V+GGR + E LS ++ ++ Sbjct: 121 NRAGASAAGLALPFTADVRSLEVEGGRFTFV-PEHGAPLTLSGID-----------GKVT 168 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + A FD++R ++ A + I L L+ ++ G L + Sbjct: 169 APTRGAPYRANVKATFDDRRFDLRLMAQLAQDSG-IKLSGSATDLSSKTVLHADGVLRAS 227 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 P + G ++ + L L + S K+ + +S L N Sbjct: 228 F-APTFEGALTLNAPKTAGLGAPLDVQA---SARAKVDLDSAALSDLVLTLDGANRPQIL 283 Query: 302 DNKTKVSQDEENLLNFSENGAESMHD 327 + + S D Sbjct: 284 AGRATIPFTGNAPAEISLQAKSLDAD 309 >gi|332161119|ref|YP_004297696.1| putative assembly protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665349|gb|ADZ41993.1| putative assembly protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859362|emb|CBX69708.1| protein asmA [Yersinia enterocolitica W22703] Length = 615 Score = 136 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 47/390 (12%), Positives = 112/390 (28%), Gaps = 53/390 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+L L L V++ G + L ++ DFR +Q G + ++G ++ H+ P Sbjct: 1 MRRLLTTLIILLVVLVAGMSALVLLVNPNDFRAYMVKQVERKSGYHLQLEGDLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + E + + + PLLS ++ V + + + S+ Sbjct: 61 LSIIAGRMALTAPGAATPVVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLIPDSEAQ 120 Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + + K+ V + ++DQ + D+NL++ Sbjct: 121 QQPGAPVAPTGNAPVDEQRAWKLDINKVQVADSLLIWQRTDNDQ-VNVRDINLELQQDAQ 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 N ++ S+ + YP Sbjct: 180 R-----------------------QIHVTLASRINRNQRDVTFSMVADVDMSHYPQQF-- 214 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 I + + G + + + L +++ + ++ + Sbjct: 215 --------GANISQFSYKLEGADIPVGGVS---GEGLLQASYQHDIQQLLLNELSFTA-- 261 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-----LNETDFFEEEEKKNKNDDLKKD 349 ++ K + + D + E+ K Sbjct: 262 --NNNQLTGSAKATFGPVPEYVINLAADNLNLDAIFGWKRQNTVSTEDTTKPATVTAPVI 319 Query: 350 DIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 IQ + ++ D Q + + +I Sbjct: 320 AIQADDDVGQDLQALRDFTAQVTLTANNLI 349 >gi|330828444|ref|YP_004391396.1| AsmA protein [Aeromonas veronii B565] gi|328803580|gb|AEB48779.1| AsmA protein [Aeromonas veronii B565] Length = 717 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 48/383 (12%), Positives = 108/383 (28%), Gaps = 60/383 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++++ L + L+ T+ ID F+ Q G+++ + G I P Sbjct: 1 MKKIVLILLGIAVAALLAIVTLISLIDPNQFKPQLAEQVRKSTGRELVMAGEIDWRFWPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + + + E LPL S + V + + HL + Sbjct: 61 LGLSLEKVALRNPAGFAEPDLVRFEQGEASVALLPLFSHRLEVGKVTLSGAHLFIQTKAD 120 Query: 120 GVSNWF------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 G SN + + L+ + + + D S Sbjct: 121 GSSNLSGLIKDATADASEPVVPATPAPTADSKPWQISLQGVALSQASALVQDDRSGTSLR 180 Query: 162 LSDLNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRS--------------- 202 L L+L + P+++ + + +G + Sbjct: 181 LDRLDLDMGQLATGEWVPVALAAKGSADKLAFDVKGQTQIKLAQEVMASELKDLSLSGSL 240 Query: 203 --------AFKITANFPAKNKAISLKIQLF-----PLAYPIIIDLFGNLFWNEKQPIYSG 249 +F I + A + +L + L + L G L + + Sbjct: 241 SAPSLRLDSFSIKGDRLAFGEWSNLTLALKGAKVEGQQALLAGSLEGTLKGRLDKEMKLA 300 Query: 250 VFS--VAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 S + + L K +L+G ++ + +S+ + + Sbjct: 301 ELSDVLLTAALEGDALPRPQMKLKLAGFARVELDKQLITLSKLVMSA----DEALLSGDG 356 Query: 306 KVSQDEENLLNFSENGAESMHDL 328 V + F +G + D Sbjct: 357 TVQLGATPAITFDLHGEKLDLDK 379 >gi|77456794|ref|YP_346299.1| AsmA [Pseudomonas fluorescens Pf0-1] gi|77380797|gb|ABA72310.1| putative membrane protein [Pseudomonas fluorescens Pf0-1] Length = 691 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 46/380 (12%), Positives = 112/380 (29%), Gaps = 43/380 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56 R++ + ++L + +F DW + + + + + A+ G + + Sbjct: 5 RKIFVWTFATLVLLLAVLVLIIVFFDWNRIKPPLNAKVSEELHRPFAINGNLSVVWRREL 64 Query: 57 ------HILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P+P V +D+ + + ++ + +R L LL+ + + + + Sbjct: 65 DEGGWRAWVPWPHVVAEDLTLGNPDWSKQPQMVTLKRVELRISPLALLAQRVAIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQR-----KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 +P+ + G +NW + + V + I G + + DQ L Sbjct: 125 EPNAQLQRLADGRANWTFKFDPKDPNAEPSNWVVDIGAIGFDKGHVTLDDQTLKTNLNLL 184 Query: 164 DLNLQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAFKITAN--FPAK 213 L F +I+ + + + + TG + ++ A + + Sbjct: 185 IDPLGKPIPFSDIVGDKAAKTAQDKGGAPQDYAFGLKVTGQYHGQKLAGQGKIGGLLALQ 244 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + + +Q ++L G L +AG L Sbjct: 245 DASKPFPLQAQAKIGDTSVELAGTLTDPLNLGALDLRLKLAGASLGNLYPLTGVTLPDTP 304 Query: 271 --RLSGNFKI-----SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENGA 322 G+ R ++ + + D V+ L+ + Sbjct: 305 PYATDGHLIAKLHEPDGAQFRYEQFNGKIGSSDIHGDL---AYVASQPRPKLSGALLSNQ 361 Query: 323 ESMHDLNETDFFEEEEKKNK 342 DL + K+ Sbjct: 362 LLFADLAPLIGADSNAKQKA 381 >gi|262040581|ref|ZP_06013821.1| AsmA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042073|gb|EEW43104.1| AsmA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 340 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 39/331 (11%), Positives = 95/331 (28%), Gaps = 33/331 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56 R+ L+ + +++V F V DW + ++ + + + A++G + + Sbjct: 5 RKTLVIITGTILLLIVLFFIVLATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQP 64 Query: 57 ------HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P+P V +DI + + + L LLS + + + ++ Sbjct: 65 DERGWRSWIPWPHVHAEDIVLGNPPAIPQVTMIHLPRVEATLAPLALLSKTVYLPWIKLE 124 Query: 109 QPHLNFYLSSKGVSNWFQR--------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 QP + ++ +NW + + + L+ I G I I D+ + Sbjct: 125 QPDVRLIRLAEDNNNWTFQLAGDKRTSGDSAPSSWSFRLDNILFDRGTIAIDDKITRSDI 184 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKN 214 + L F + S G + + ++ Sbjct: 185 TILVDPLGKPLPFSEVTGTKDRHSAAKPGDYVFGLSLKGRYKGQPVTGNGKIGGMLALRS 244 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270 + ++ + + G + + AGD + L Sbjct: 245 ASAPFPLEGDFHSGNTRVAFSGTVSYPLNVGGIDLRLKFAGDSLRDLYDLTGVLLPETPS 304 Query: 271 -RLSGNFKISDGNVRISRYKLQSILPNSSTD 300 G + ++ + S+ Sbjct: 305 FSTDGRLRADFTQKTACALTIRILTAESAIA 335 >gi|311278940|ref|YP_003941171.1| AsmA family protein [Enterobacter cloacae SCF1] gi|308748135|gb|ADO47887.1| AsmA family protein [Enterobacter cloacae SCF1] Length = 617 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 47/388 (12%), Positives = 121/388 (31%), Gaps = 52/388 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ +FR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVIVAGLSALVLLVNPNEFRDGMVKQVASRSGYQLRLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK-- 119 S+ + + + + + + + + LPLLS +++V + + + ++ Sbjct: 61 LSILSGRMTLTEPGASAPLVRADNMRLDVALLPLLSHKLQVDKVMLKGAVVELTPQTEAV 120 Query: 120 -------GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 G + + + + ++ V + +D++ + ++ LQ+ Sbjct: 121 KDSAAPVGPKDSDLPRVNTGGGWSFDISRLQVADSVLVF-QHANDELVTVRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + F N ++ A+S + YP + Sbjct: 180 AQH-----------------------QATVEFSGRMNRDQRDWALSFTALVDGSRYPDNL 216 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + +++ G + A +K + + S+ L + Sbjct: 217 SATFS----------KMNWTLQGAGLPAQGISGQA---SFEAAWKEAQKTLSFSQLALTA 263 Query: 293 ILPNSSTDEDNKTKVSQDE-ENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 + + + V + + + D N + + Sbjct: 264 ----NDSVLRGEGHVLLGDTQPQWTLNLQADRLDLD-NLLGQDAPAAAAAASPQGQTPPP 318 Query: 352 QYSVNKKEEKDNSHDKENQENFSGDKMI 379 + + D D N FS D ++ Sbjct: 319 RQQSPVIADNDTRPDYSNLRGFSADLLL 346 >gi|313649895|gb|EFS14315.1| protein asmA [Shigella flexneri 2a str. 2457T] gi|332755903|gb|EGJ86257.1| protein asmA [Shigella flexneri K-671] Length = 604 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 48/378 (12%), Positives = 117/378 (30%), Gaps = 59/378 (15%) Query: 15 VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74 +++ G + L ++ DFR+ +Q G ++ + G ++ H+ P S+ + + + Sbjct: 1 MLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQLSILSGRMSLTAQ 60 Query: 75 EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS---------NWF 125 + + + + LPLLS ++ V + + + ++ V + Sbjct: 61 GASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAVRSEDAPVAPRDNT 120 Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 + D + + + V + E D+ + ++ LQ+ + S Sbjct: 121 LPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQDPQHRGS------- 172 Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 F N ++ ISL + YP + Sbjct: 173 ----------------FEFSGRVNRDQRDLTISLNGTVDASDYP----------HDLTAA 206 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 I + + G ++ + ++ S + ++ L + + + + Sbjct: 207 IEQINWQLQGADLPKQGIQ---GQGSFQSQWQESHKRLSFNQISLTA----NDSTLSGQA 259 Query: 306 KVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361 +V+ E+ + D LNET E + S E Sbjct: 260 QVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLPRPVISSRIDEPA 319 Query: 362 DNSHDKENQENFSGDKMI 379 + + F+ D ++ Sbjct: 320 Y-----QGLQGFTADILL 332 >gi|160871837|ref|ZP_02061969.1| AsmA family [Rickettsiella grylli] gi|159120636|gb|EDP45974.1| AsmA family [Rickettsiella grylli] Length = 559 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 52/419 (12%), Positives = 139/419 (33%), Gaps = 49/419 (11%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 + R VL+ + + + LV + +F++ D + + T G+++ + G I+ I P Sbjct: 4 LFRIVLMLISAVILLGLVSLIGLVVFVNPNDLKPQISQAVTQFTGRQLHLDGNIQWSIFP 63 Query: 61 FPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 + + D + + ++I+ L ++ LPL ++ + + ++ L ++ Sbjct: 64 WLGLQLNDASLANSPGFGRNPLAQIKKLDIQVRLLPLFHKQLEIGKLQLNGLALYLVKNA 123 Query: 119 KGVSNWFQR---------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 +G NW I+ + ++ G I DQ+ ++ Y ++ Sbjct: 124 QGHVNWEGPWSSSSKTTPTHPDSHPLEHLKPLGFIVAGLGIRNGHIIYADQQKNKRYEIT 183 Query: 164 DLNLQISARFLNIISPLSI-------DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216 L L+ + +N SP+ I S+K +V T + + ++ P Sbjct: 184 HLQLKSTHLAVNKRSPVDIQFNLNTNASMKAAVKLRSTLLWRADDNQLELN---PFHLNT 240 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS--AKKSRLSG 274 + P + + N++ + + ++ +G Sbjct: 241 FLQDARTPKKELPFSLKGNIFIDLNKQTLNADKLMAFINHTPLTGHILGQNFLNNPYFTG 300 Query: 275 NFK---ISDGNVRISRYKLQSILPNSSTDED------------NKTKVSQDEENLLNFSE 319 +F ++ G + +L ++ ++ + +N Sbjct: 301 SFTSPHMNVGRFVFKKMQLGFQFKDNLLTLKPIQGQFYQGHYQGDATINFNSKNPF---I 357 Query: 320 NGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK--EEKDNSHDKENQENFSGD 376 + +N F + ++ + +++ + + + Q F+ D Sbjct: 358 TAQSQFNQINTASLFRDLTNMSQIQLAGLASLNFTLTTQGNTAESFIKNLNGQGQFNID 416 >gi|51243946|ref|YP_063830.1| periplasmic protein (AsmA) [Desulfotalea psychrophila LSv54] gi|50874983|emb|CAG34823.1| related to periplasmic protein (AsmA) [Desulfotalea psychrophila LSv54] Length = 689 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 53/410 (12%), Positives = 117/410 (28%), Gaps = 47/410 (11%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L + ++++G + ID + Q G+++ + G + I P Sbjct: 1 MKKLLYLIFAALLLIIIGFGALFFLIDPNQLKPTIADQVKKATGRELVISGDMSWKIFPR 60 Query: 62 PSVFFKDIRIDQKEDG-SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + + + +PLLS + + ++ + H+ + G Sbjct: 61 IGFSLGETTLQSPPGFAENFVQFSNAELDLALMPLLSHRLEIGNINLKNAHIFIQTLADG 120 Query: 121 VSNWF---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 SN ++ ++IL+ I + I + ++ + +S L Sbjct: 121 RSNMDGMITGKKEAEEKQSTSAETAEKAPWDIILQGISLTNASATIRNDKTGDLKTMSKL 180 Query: 166 NLQISARFLN----IISPLSIDSIKGSVIAEGT---------GNFDNKRSAFKITANFPA 212 N + I LS S + +V + G G K+ + +A P Sbjct: 181 NFSLDHFSPGEWSKISFSLSATSNEITVSSSGQTGIFIAADLGEVKLKKLHLETSATTPE 240 Query: 213 KNK------------AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL 260 + +D K V G + Sbjct: 241 IQIESVRIDLDQFTVGQDGNLTFSIKGKKRDLDFASKGSTKIKSDRAFNQLQVTGLQVET 300 Query: 261 LNLELSAKKSRLSGNFKIS-DGNVRISRYKLQSILPN-SSTDEDNKTKVSQDEENLLNFS 318 + K +L+ K + NV S + S+ + K + F+ Sbjct: 301 NLKGDALPKKKLNLILKADSNYNVEQSLLTIPSLEADIEQMIIKGKASFKDGRVRQIRFN 360 Query: 319 ENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 + D + K + + +E D S K+ Sbjct: 361 MSSESIDID----QLLGMNKAKPAAKPSQTGPEVKATISDQEPDLSALKQ 406 >gi|326623956|gb|EGE30301.1| protein AsmA [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 610 Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 39/326 (11%), Positives = 99/326 (30%), Gaps = 50/326 (15%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70 L V++ G + L ++ DFR +Q ++ + G ++ H+ P S+ + Sbjct: 2 ILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQLSILSGRMT 61 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS-------- 122 + + + + + + PLLS ++ V + + + ++ V Sbjct: 62 LTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAVRSDDAPVAP 121 Query: 123 -NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + D + + + V + E+D + D+ L + + + Sbjct: 122 KDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQDAEHRGT--- 177 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 F N ++ A+S + YP N Sbjct: 178 --------------------FDFSGRVNRDQRDLALSFSGTVDASDYP----------HN 207 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 I + + G +E + +L ++ + + + L + + + Sbjct: 208 LTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA----NDSSL 260 Query: 302 DNKTKVSQDEENLLNFSENGAESMHD 327 +V+ E+ ++ D Sbjct: 261 TGHVQVTLAEQPEWQIDLQSSKLNLD 286 >gi|197335826|ref|YP_002156573.1| AsmA [Vibrio fischeri MJ11] gi|197317316|gb|ACH66763.1| AsmA [Vibrio fischeri MJ11] Length = 711 Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 58/426 (13%), Positives = 122/426 (28%), Gaps = 68/426 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ + + F V+ + L ++ +F+ Q G+++ + G I+ P Sbjct: 1 MKKIALLISIPFIAVIGAVLVLVLLVNPNEFKPLITEQVEAQTGRQLTIDGDIEWRFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + E + + PL E+ + + +D + Sbjct: 61 VGFSIGKMALSNPEGFVEPNLVSFDNAILDLNVRPLFQHEVSIGLITLDGASFTLHTLKN 120 Query: 120 GVSNWF------------------------------QRKSTMDMIHNVILEKIHVKGGRI 149 GV+N ST V L+ I + + Sbjct: 121 GVTNLDGLVAKKETSTVENNNPTAPAEESDVNPEASSATSTEFNGWKVSLQGIALTNAEV 180 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNI----ISPLSIDSIKGSVIAEGTGNFD------- 198 I D ++ SD+NL +S L D K V +G + Sbjct: 181 LIQDDKAGSKIHFSDMNLSLSQFIPGQWAELNFDLKGDLGKQKVALKGKTELNIAETLDD 240 Query: 199 ----------------NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW-- 240 NK + T + + +K +L ++ A + ++ Sbjct: 241 ASFKNVEFNASYADAVNKFNDITFTIDQFSFDKWANLALKAKGKANNLEVNSNSTFALYV 300 Query: 241 --NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 S K + E + +F ++ + I + L ++ + Sbjct: 301 PKALDLIKIKEFTSTNNVKGKGIPNEDVTAVIGFNSSFDLNKSFLNIDKLALSAVDTD-- 358 Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358 K V ++ + F D ++E K + + SV K+ Sbjct: 359 --FTGKLTVQLNDIPKVRFDLRSPSIDVDALLATLPKDESSKTVDSNTSTKASSTSV-KE 415 Query: 359 EEKDNS 364 E D S Sbjct: 416 VEPDLS 421 >gi|75675202|ref|YP_317623.1| hypothetical protein Nwi_1009 [Nitrobacter winogradskyi Nb-255] gi|74420072|gb|ABA04271.1| Uncharacterized protein involved in outer membrane biogenesis [Nitrobacter winogradskyi Nb-255] Length = 656 Score = 135 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 110/342 (32%), Gaps = 26/342 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVP---LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58 ++R+ I + + V ++G + +D R+ E Q + G G I + + Sbjct: 14 MKRLGISVAAILGVAVIGLTGLISMSRLLDHDALRDAVETQIRTVTGLDFVADGRIDVSV 73 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 P V F D+RI + + +E L+ PLL ++ D+ + PH+ ++ Sbjct: 74 FPGSYVSFHDVRIKGGDADAPALSVEALTANLRLFPLLMQRFQIADVMLLHPHIRVRRAA 133 Query: 119 KGVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 G SNW R + + +I ++ G + D + L ++L Sbjct: 134 DGRSNWTPFMETIARNMKPGADNPLSFSEIRIQNGELSYEDGDGRISENLHGIDL----- 188 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPII 231 L+ SI S A G ++ +R I+ + +++ + + Sbjct: 189 ------SLAWPSISRSFAATGQFDWRGERVDGSISLGDFLAALSGERSGLKIKVASPRLK 242 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 G + I G S + + SG F R S Sbjct: 243 FAFDGTVANPVSL-IMEGTLSADSTSLREALRWIGQPPPG-SGGFDRFSLKARASVIGSS 300 Query: 292 SILPNSSTDEDN---KTKVSQDEENLLNFSENGAESMHDLNE 330 L N + + D + ++ A D Sbjct: 301 VALTNVNIEIDGNVAEGVMTYANNGRQTLQATLAAGTLDFTP 342 >gi|46202092|ref|ZP_00053767.2| COG2982: Uncharacterized protein involved in outer membrane biogenesis [Magnetospirillum magnetotacticum MS-1] Length = 589 Score = 135 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 54/414 (13%), Positives = 132/414 (31%), Gaps = 53/414 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L+ LG + V++ +P I + + G+ ++++G I + + P Sbjct: 3 MKKILMALGVVIVVIIGALAMIPAMIPAERIQGEIVAGVKSATGRDLSIQGKISVSVFPS 62 Query: 62 PSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 SV ++ + ++ + +R + LPLL G++ V + P + + Sbjct: 63 LSVQVGNVALANPAGYSSKDLIRLGAVDVRLKLLPLLGGKVEVDSFVLVDPIITLETDRQ 122 Query: 120 GVSNW---------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 G NW + + ++ L + + G++ ID ++ Sbjct: 123 GKGNWVFEGPAAAAPAPSVTTKPTDKPASAPSSAGVSDIRLGDVRITNGKLTQIDGKTGA 182 Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218 +S++NL+ +++ S+ + A+G+ ++ K+ + Sbjct: 183 RQEVSEINLR-----------VALKSLSEPLSAKGSLVWNAKKVELDLDVGSLKALMDGQ 231 Query: 219 -LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE---------LSAK 268 + L + P+ + L GN P G + + L Sbjct: 232 SSTLGLVVASEPVKLGLKGNAK-GGASPGLDGALDLNVPSIRNLAAWAGSPITMAGNGLG 290 Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328 ++G + + Q+ + + V+ M DL Sbjct: 291 PLSITGKLAAGPTQIAFT----QAAIAIDAIKAKGDVTVNTGAAKP-AIKGRLDVDMLDL 345 Query: 329 N---ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 N + + + + K Q D+ D ++ D + Sbjct: 346 NPYLPPEGAQPKGGEGKATPAGGGAAQTQAKPAGWSDDPIDASGLKSADVDFAL 399 >gi|260772451|ref|ZP_05881367.1| AsmA protein [Vibrio metschnikovii CIP 69.14] gi|260611590|gb|EEX36793.1| AsmA protein [Vibrio metschnikovii CIP 69.14] Length = 699 Score = 135 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 45/436 (10%), Positives = 127/436 (29%), Gaps = 68/436 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ + + L +V+ + +F++ F+ Q G ++ ++G I P Sbjct: 1 MKKLSLFIAALLVMVIAAVVALVVFVNPNQFKPLIIEQTRQQTGLELVIEGDISWQFFPA 60 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + K++ + + +PL ++ + ++ ++ Sbjct: 61 IGFELGKTELRNPDGFTQNNLFKVDRVGIDIAVMPLFRHQLHIGNVRLEGAEFYLETLPN 120 Query: 120 GVSNWF-------------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQ 154 G SN ++T D + L + V R++++DQ Sbjct: 121 GRSNLDSLTQAQNQKPSTQVEAVLTDSPSSQPEETTADQPWTLSLAGVTVSQARLEMLDQ 180 Query: 155 ESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKR--------- 201 ++ L D++L +S R+ ++ + + G Sbjct: 181 QTGTHSTLYDVDLTVSEFAADRWTSVDFSAKGSANQQQFSVHGKAEIKLSADFKQYALRN 240 Query: 202 --------------SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 A ++ ++ +L + A + D+ G I Sbjct: 241 ITLNSTFEDPSVRIDALQLKLATFEFDQDNALTFAVKGNAADMTFDVSGQAQLQVDAAIS 300 Query: 248 SGVFS--VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 + + + L S + ++ N + L ++ N+ + Sbjct: 301 TVSLDKLLLNSTLQGAALPQSPLQVEMASRIVFDVTNSTLD-VALDRLMANA-IALSGQA 358 Query: 306 KVSQDEENLLNFSENGAESMHDL---------NETDFFEEEEKKNKNDDLKKDDIQYSVN 356 + + + F + D N + +++ D+ + Sbjct: 359 NIHLADIPKIRFQLHSPAIDLDEFLGLDQVASNSAAQPSVNAPTSPPVEVE-PDLSALRD 417 Query: 357 KKEEKDNSHDKENQEN 372 + + D+ N Sbjct: 418 LDVVGEITIDRFKAGN 433 >gi|261343406|ref|ZP_05971051.1| protein AsmA [Providencia rustigianii DSM 4541] gi|282568548|gb|EFB74083.1| protein AsmA [Providencia rustigianii DSM 4541] Length = 620 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 49/392 (12%), Positives = 114/392 (29%), Gaps = 60/392 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R L L L V++ G + + ++ DFR Q G + A G ++ H+ P Sbjct: 1 MKRFLTTLIILLVVLVAGLAALVMLVNPNDFRGYIVEQVEKKSGYQFAFNGDLRWHVWPT 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN-------- 113 S+ I + E + + E PL+S + V + ID + Sbjct: 61 LSIITGPISVTAPNATQPVLSAENMRLDVELWPLISHRLSVEQVVIDGAVIRKTPESEAV 120 Query: 114 ----FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 ++ G + + + KI + + + Y L ++NL + Sbjct: 121 IQRKVPIAPGGSQVPAEPSDKNQ--WLLDISKIDITNSLVIWQTAKD--EYNLRNINLSL 176 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 + SV G N + + F + ++ + + Sbjct: 177 KKNNDK----------QVSVKFSGNLNKNQQELNFDLNSDVDLSKLSQQVS--------- 217 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 + + + G + L V ++ Sbjct: 218 --------------GQVTQFDYQLKGVDLPENGITGKVTTDFLYTK--ADTSAVNLNNLI 261 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDD-L 346 +Q+ + ++ V + + + + D L + N + + Sbjct: 262 VQA----NDSELKGNIHVGLTDIPDIVVNLSSTSLNLDSLLGQAPASGNSTTLNNASEDV 317 Query: 347 KKDDIQYSVNKKEEKDN--SHDKENQENFSGD 376 ++ + V N +D ++F+ + Sbjct: 318 VNNNERIGVKPVISGSNMDKYDLTGLKSFTAN 349 >gi|317152396|ref|YP_004120444.1| AsmA family protein [Desulfovibrio aespoeensis Aspo-2] gi|316942647|gb|ADU61698.1| AsmA family protein [Desulfovibrio aespoeensis Aspo-2] Length = 691 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 54/404 (13%), Positives = 123/404 (30%), Gaps = 53/404 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ LI G L ++ + A + +D +++ + + G+++ +G I P+ Sbjct: 5 LKIGLIVFGSLVALFVAAAIILVATVDPNEYKAEIAQAVKENTGRELVFEGDIGFSFFPW 64 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + + S +I + +PL SG++ + + +D N + + Sbjct: 65 LGLEVGPVALGNRPGFSPDAMIRINRAEASVQIMPLFSGKVAIGVIALDGFTANLAVDKQ 124 Query: 120 GVSNW-----------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQES 156 GV+NW + + ++ + I + + D + Sbjct: 125 GVNNWDDLTAAGKNADKNGGATAAPEAQPAADGSGQSVKDLSVLGIEITNASLVYDDAMA 184 Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216 + L++L+L + P + + N R TA + Sbjct: 185 GKKTALANLDLVVGEVGDKRPFPFEL-----AFDLVMDAPKINTRPRLAGTATYDIDAAT 239 Query: 217 ISLK-IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS----- 270 + + + L L I F YSG +A + L +L + Sbjct: 240 LDISGLTLDALGMEITGLFFAKAK---DGVSYSGEIDLARTSPRELMKQLGMESPVTADP 296 Query: 271 ----RLSGNFKISD--GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 L K + + + +L+ + + + + F+ N + Sbjct: 297 AVLEALDAAIKFNGTADSASLESLRLKLDDTTVTGTGTVRNFA----KPAIEFAINVDDI 352 Query: 325 MHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 D + + K S E D S ++ Sbjct: 353 DADRYMPPASGGQGSEAKA----GPAAAGSAEPATEPDLSALRD 392 >gi|270264563|ref|ZP_06192829.1| AsmA family protein [Serratia odorifera 4Rx13] gi|270041699|gb|EFA14797.1| AsmA family protein [Serratia odorifera 4Rx13] Length = 677 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 48/413 (11%), Positives = 119/413 (28%), Gaps = 42/413 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 + +G + +V+ + DW + + + + + A++G + + Sbjct: 6 KAFSWVGGIVLLVIAAQVIFVMTFDWNRLKPTINDKVSAELQRPFAIRGELGVDWAREKD 65 Query: 57 -----HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P + +DI + + G +++ + L LL E+ + +++ Q Sbjct: 66 EGGWRAWVPWPHIHAEDIVLGNPKNIPGDSMVQLQRVDASIAPLALLGKEVLIPRIWLKQ 125 Query: 110 PHLNFYLSSKGVSNWFQ----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P+ + G +NW +V + + G+I + D + Sbjct: 126 PNATLQRLANGDNNWTFNLAGDPKQPTSDWSVNIHDVVFDRGQIDVKDATLKADFRALID 185 Query: 166 NLQISARFLNIISPLSIDSIKGS---VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLK 220 L F + S + G ++ + + +N + Sbjct: 186 PLGKPLPFSEVTGKKDAGSAITPDYVFGWKVKGKYNGEPLSGSGKMGGMLSLQNAEVPFP 245 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR--------- 271 +Q + + + G L ++GD L Sbjct: 246 LQADVRSGAARVVVAGTLSDPMNLGGLDLRVKLSGDSLGNLYGLTGVLLPNTPPYSTDGH 305 Query: 272 LSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-DLN 329 L G V + ++ + + + V+ L+ + DL Sbjct: 306 LIARLHEKGGAVFQYQKFDGKIGDSDIHGNLK---YVASKPRPKLSGEVLSKQLRLADLA 362 Query: 330 E---TDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 D E+ + + D + + N D + F+ ++ Sbjct: 363 PLIGADSNTEKAGRGEKSRQPADKVLPVEKFDTKSWNLMDADV--KFTAQRIE 413 >gi|261856438|ref|YP_003263721.1| AsmA family protein [Halothiobacillus neapolitanus c2] gi|261836907|gb|ACX96674.1| AsmA family protein [Halothiobacillus neapolitanus c2] Length = 797 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 120/342 (35%), Gaps = 24/342 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R+++ + L V+++ A D D+++ G+ I + G IK+ + P+ Sbjct: 4 IKRIVMWVVALILVLVIAAVAFVATFDPNDYKDKISSLVQEKTGRSIELGGPIKLTLFPW 63 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V +D+ + S + + ++A FLPLL G+ V + +D ++ +S Sbjct: 64 LGVSVRDVALGNAPGFSPKDMVTAKTVEVKAAFLPLLKGQFEVGKLVLDGATIHLARNSD 123 Query: 120 GVSNWFQ----------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 GV+NW + ++ + + + + D + Q L Sbjct: 124 GVTNWADLLARPSASESGASPGSAPAATRNATSLAIGGVAINDATLDWQDAVTGQSLALQ 183 Query: 164 DLNLQISARFLNIISPLSID---SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 LNL A L +S++ + + S + + TG+ + T K++ Sbjct: 184 HLNLDSGAIRLGQAVDMSLNFSYATQDSKLGKLTGDVRLSSTFDMKTNGEQFSAKSMKFH 243 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-RLSGNFKIS 279 + P L + P + ++ + +K ++ + Sbjct: 244 ASVVPDPQHNPNALPAKTELDLSVPEVTVDLPKHSVNLSAMDATVDMEKGFGMTHAALTA 303 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321 G + K + + K + L+FS +G Sbjct: 304 KGALSADWQKG--LYSSDKLSLAGKMQGMPTHTGELDFSAHG 343 >gi|254293702|ref|YP_003059725.1| AsmA family protein [Hirschia baltica ATCC 49814] gi|254042233|gb|ACT59028.1| AsmA family protein [Hirschia baltica ATCC 49814] Length = 795 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 62/396 (15%), Positives = 127/396 (32%), Gaps = 23/396 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R ++ + +F+V++ G FI + +++ E A +G+ + + G IK+ + P Sbjct: 1 MIRFILIILAIFAVLIGGLVAAVHFIPSSAYKDKIETVAESALGRDVTINGDIKLRLFPK 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + I + S + + L + LPLLS ++ + + + P L+ Sbjct: 61 ITASAGQTVIANPKGFGDSDFASMTELRAAVKILPLLSQKVEIDEFILVDPKLSLVKLEN 120 Query: 120 GVSNWFQRKSTMDMIH------------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 G +NW ++ D L + + G + D+++ Q + L+ LN+ Sbjct: 121 GENNWTFSSTSTDSPAPEDETPTNPDAVQARLGDVRLVNGDLSYDDRQAGQTHTLTKLNI 180 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 I +N + D I + E + +N + + + + L F Sbjct: 181 LIKLPEINGPLGVDGDGILDELPFELNADVENLQKLLEGVSTPVNADLKTDLATTGFNGN 240 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 + + +L N + P K+ + G + +S Sbjct: 241 IVLGDVIGLDLTANAEVPDLQAFADFMKIEIPGAKA---LGKANVKAKVDGQVGALILSD 297 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL- 346 L+ D V + + N D E ++ L Sbjct: 298 VILKHSSDLLKIDFTGGANVGEKIAFKGDLDFNAPNLRALAQTADVVLPEGDIYRSFSLD 357 Query: 347 -----KKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 D + S + D N SG K Sbjct: 358 GQTQGSLDSVSLSNATLKFDDIVGTGNMLLNLSGAK 393 >gi|300314078|ref|YP_003778170.1| uncharacterized protein involved in outer membrane biogenesis protein [Herbaspirillum seropedicae SmR1] gi|300076863|gb|ADJ66262.1| uncharacterized protein involved in outer membrane biogenesis protein [Herbaspirillum seropedicae SmR1] Length = 682 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 53/401 (13%), Positives = 120/401 (29%), Gaps = 46/401 (11%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++++ L +++ A L DW + + + +G++ A+ G + + Sbjct: 6 KIILWLCASLILLITAAVIFILSFDWNRAKPWINERVSASIGREFAIDGDLSLHWQRAQT 65 Query: 57 -----------HILPFPSVFFKDIRIDQKEDGS---FESKIEGLSMRAEFLPLLSGEIRV 102 LP+P + + +RI S + I ++ LPLL +I + Sbjct: 66 LPGAAPPGFWERWLPWPRLQAEQLRIGNPPAFSQAGQMATIGQVTFTLNPLPLLVHDIAL 125 Query: 103 FDMYIDQPHLNFYLSSKGVSNWFQRKSTM-DMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 + I P ++ +++ V+NW + S+ N+ L +I ++ G++ + D Sbjct: 126 PSLDIRDPSVSLLRNAQAVNNWTFKSSSAGPSAWNLRLGRITLRQGKLSLDDA------- 178 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221 + + L+ L+ P G+ N K +N + Sbjct: 179 VDKIKLKAEIDTLD---PAVEKIYGLGWKLSGSFNGAPVSGQGKAGGVLSLQNVQQPYPL 235 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RL 272 Q I + G L SV+G L RL Sbjct: 236 QAQVRVGKTAIGVHGTLTRPAALAALDLRLSVSGASMGNLYPLTGVLLPETPPFATEGRL 295 Query: 273 SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMHDLNET 331 G ++ + + + + + + + + ++ Sbjct: 296 IGKIDAGHSQWDYEDFRGKVGQSD----INGSLRYTTGAGAARSQLTGSLTSEVLRFDDL 351 Query: 332 DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQEN 372 + + + + Q K S D + Sbjct: 352 APLIGADSNAEKAERGAQERQPGDKVLPVKTFSTDAWGALD 392 >gi|293603493|ref|ZP_06685916.1| AsmA family protein [Achromobacter piechaudii ATCC 43553] gi|292818104|gb|EFF77162.1| AsmA family protein [Achromobacter piechaudii ATCC 43553] Length = 694 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 42/366 (11%), Positives = 97/366 (26%), Gaps = 41/366 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ IG+ +++++ DW + +A+ +G+ A+ G + + Sbjct: 8 RKIAIGIVGALALLVLVLVVFIATFDWNRAKPMINERASAAIGRPFAINGDLSVKWQREP 67 Query: 58 -------ILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 LP+P DI + + ++ LPLL + + + + Sbjct: 68 AEGGWRAWLPWPHFIANDISVGNAPWAKAPTFATLKRGEFSLAPLPLLRQRVVIRRIQLT 127 Query: 109 QPHLNFYLSSKGVSNWFQ--RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 +P + + G +NW +S + + +I GR+ +D+ + Sbjct: 128 EPAADLQRLADGRANWEFTLPESGEPSPWVLDINEIGFDKGRVAYVDEMLQADLTVLVDP 187 Query: 167 LQISARFLNIISPLSIDSIKGS-------VIAEGTGNFDNKRSAFKITAN--FPAKNKAI 217 L F ++ S G + + + ++ Sbjct: 188 LGKPVPFADVAGAAFAPQDGQSPAPRDYVFGWSVEGKYKGLPTKGEGKVGGMLALQDPKQ 247 Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RL 272 +Q + G + +AG L Sbjct: 248 PFPVQADVAVGGTKASVAGTVTDPAHLGALDLRLKLAGSSMAQLYPLTGVTLPDTPPYST 307 Query: 273 SGNFKISDGN-----VRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES-M 325 G+ N + + + + L + + M Sbjct: 308 DGHLVAKLQNPGGAVFDYKDFNGKVGNSD----LHGDISFALGAPRPKLTGKLSSKQLRM 363 Query: 326 HDLNET 331 DL Sbjct: 364 VDLGPL 369 >gi|309787864|ref|ZP_07682474.1| protein asmA [Shigella dysenteriae 1617] gi|308924263|gb|EFP69760.1| protein asmA [Shigella dysenteriae 1617] Length = 604 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 47/378 (12%), Positives = 116/378 (30%), Gaps = 59/378 (15%) Query: 15 VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74 +++ G + L ++ DFR+ +Q G ++ + G ++ H+ P S+ + + + Sbjct: 1 MLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQLSILSGRMSLTAQ 60 Query: 75 EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS---------NWF 125 + + + + LPLLS ++ V + + + ++ V + Sbjct: 61 GASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAVRSEDAPVAPRDNT 120 Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 + D + + + V + E D+ + ++ LQ+ + S Sbjct: 121 LPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQDPQHRGS------- 172 Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 F N ++ ISL + YP + Sbjct: 173 ----------------FEFSGWVNRDQRDLTISLNGTVDASDYP----------HDLTAA 206 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 I + + G ++ + ++ + ++ L + + + + Sbjct: 207 IEQINWQLQGADLPKQGIQ---GQGSFQAQWQELHKRLSFNQISLTA----NDSTLSGQA 259 Query: 306 KVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361 +V+ E+ + D LNET E + S E Sbjct: 260 QVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLPRPVISSRIDEPA 319 Query: 362 DNSHDKENQENFSGDKMI 379 + + F+ D ++ Sbjct: 320 Y-----QGLQGFTADILL 332 >gi|92116803|ref|YP_576532.1| AsmA [Nitrobacter hamburgensis X14] gi|91799697|gb|ABE62072.1| AsmA [Nitrobacter hamburgensis X14] Length = 643 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 61/342 (17%), Positives = 117/342 (34%), Gaps = 26/342 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVP---LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58 ++R+ I + + V L+G + +D R+ E Q + + G G I + + Sbjct: 1 MKRLGISVAAILGVALIGLTGLISMSRLLDRDALRQAVETQISAVTGLDFVADGRIDVSV 60 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 P V F D+RI + G+ ++ L+ LPLL ++ D+ + +PH+ ++ Sbjct: 61 FPGSYVSFHDVRIKGSDAGAPALSVDVLTANLRLLPLLMQRFQIADIMLLRPHIRVTRAA 120 Query: 119 KGVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 G SNW R V +I V+ G + D ++ L D++L Sbjct: 121 DGQSNWIPFVETIARTMKPGADSPVSFSEIRVQDGELSYEDTANEVSEKLGDIDL----- 175 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPII 231 L+ SI S A G ++ +R I+ + + +++ + P+ Sbjct: 176 ------SLAWPSISRSFAATGQFDWRGERIDGSISLSDFLAALSGERSGLKVKVASAPLK 229 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 G + + G + + + SG F R S Sbjct: 230 FAFDGTVANPVSL-MMEGTLTADSTSLREALRWIGQPPPG-SGGFGRFALKARASMIGAS 287 Query: 292 SILPNSSTDEDN---KTKVSQDEENLLNFSENGAESMHDLNE 330 L N + + D + ++ A D Sbjct: 288 IALTNVNIEIDGNVAEGVMTYANNGRQTLQATLAAGALDFTP 329 >gi|238749954|ref|ZP_04611458.1| hypothetical protein yrohd0001_37230 [Yersinia rohdei ATCC 43380] gi|238711883|gb|EEQ04097.1| hypothetical protein yrohd0001_37230 [Yersinia rohdei ATCC 43380] Length = 597 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 40/368 (10%), Positives = 102/368 (27%), Gaps = 55/368 (14%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81 + L ++ DFR +Q G + ++G ++ H+ P S+ + + Sbjct: 3 ALVLLVNPNDFRGYMVKQVEKKSGYHLQLEGDLRWHVWPQLSIIAGRTALTAPGAATPVL 62 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-------KSTMDMI 134 E + + + PLLS ++ + + + + S+ Sbjct: 63 SAENMRLDVKLWPLLSHQLDIKQVMLKGAVIRLTPESESQQRADAPVAPSGNTPVDEHRA 122 Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 + + K+ V + ++DQ + D+NL++ Sbjct: 123 WKLDINKVQVVDSLLVWQRTDNDQ-VNVRDINLELKQDDQR------------------- 162 Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254 N ++ + S+ YP I + V Sbjct: 163 ----QVHITVASRINRNQRDISFSMVADADMRHYPRQFS----------ASISQFTYKVE 208 Query: 255 GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314 G + + + L +++ + +++ + + K + + Sbjct: 209 GADIPVGGVS---GEGTLQASYQDDIKQLLLNQLSFTA----NDNQLTGSAKATLGDIPD 261 Query: 315 LNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV---NKKEEKDNSHDKENQE 371 + + D F E K N + + + D D ++ Sbjct: 262 YDINLAADNLNLD----TIFGWEPKSTANSKDNVKQPAVTAPVIAIQADDDVGQDLQSLR 317 Query: 372 NFSGDKMI 379 +F+ + Sbjct: 318 DFTAQLAL 325 >gi|146305819|ref|YP_001186284.1| AsmA family protein [Pseudomonas mendocina ymp] gi|145574020|gb|ABP83552.1| AsmA family protein [Pseudomonas mendocina ymp] Length = 680 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 96/336 (28%), Gaps = 40/336 (11%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW R Q + + + A++G +++ LP+P + +R+ Sbjct: 28 LFDWNRARPLINEQVSTALQRPFAIEGDLRVVWKPEAGERGLSGWLPWPHFSAEQVRLGN 87 Query: 74 KED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------ 125 E G ++ R LPLL + + + + ++ + G +NW Sbjct: 88 PEWAQGDTFVSLDSARFRLAPLPLLWKTVSIPSIELGTALVDLQRLADGRANWSFDLGKD 147 Query: 126 --QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS---ARFLNIISPL 180 + + I G +++ D+ S L A + + Sbjct: 148 DEAEPRDEPAAWTLDIGTIAFARGHVQLDDRSSKTRLEAVVEPLGEPIPFADIVGKGAAD 207 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNL 238 + + G+F + + ++ +Q I + G+L Sbjct: 208 RAAAQDYAFAWRTKGDFRGQPITGDGKVGGLLALHDASLPFPLQADLRIGATRIRVAGSL 267 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRY 288 + ++G+ L RL + +DG + R + Sbjct: 268 TDPQNLGALDLRLQLSGNSLSQLYPLTGVTLPDTPAYSTDGRLQADLSDADGAIFRYLDF 327 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 + + D V++ L+ + Sbjct: 328 NGRIGASDIHGDLT---FVARQPRPKLSGQLTSNQL 360 >gi|197117289|ref|YP_002137716.1| hypothetical protein Gbem_0899 [Geobacter bemidjiensis Bem] gi|197086649|gb|ACH37920.1| conserved hypothetical protein [Geobacter bemidjiensis Bem] Length = 1061 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 51/369 (13%), Positives = 118/369 (31%), Gaps = 31/369 (8%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK-GGIKIHILPFP 62 +L L + +V+++ A +P +D ++++ Q + + + + G + + P Sbjct: 9 WLLPALATILTVIVLAAALLPRLLDLDTYKQEILAQVKSSLKRDLQYQTGEFSLRL--TP 66 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + F + + +K+ S + L++R LPLL ++ V + +++P + +G Sbjct: 67 AFTFTGVTVKEKDGSSDFITADRLTVRIAILPLLRKKLVVSRLQLERPAMRIVRDRQGTF 126 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIID---QESDQVYFLSDLNLQISARFLNIISP 179 N + + + +K G I+ D E V LS+ +L +S Sbjct: 127 NIADLLTPSAGGEAPGIRGLELKKGHIRFTDFAFSEKPVVTELSNADLFLSRLVRGKSCD 186 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 + + GS + A P ++ K+ PL + Sbjct: 187 FKLAAALGSPKGPVPVSLSGSAKI--PEAGTPFSGMEVNGKVATGPLDAG---HFWPYYS 241 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 +G ++ G +++ + + Sbjct: 242 KWVPFKSLAGELALDAS---------------FKGRLNAFKSKA---EFRITRLNLDYPQ 283 Query: 300 DEDNKTK-VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358 + L + N + H + D F+ + D+ D++ + N Sbjct: 284 VFHARLTPRLLKGSCALTLTANQLDIEHVKVDLDGFKVNGGV-RLSDIHSGDLRITANAS 342 Query: 359 EEKDNSHDK 367 N D Sbjct: 343 SNSFNLRDF 351 Score = 38.7 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 24/235 (10%), Positives = 68/235 (28%), Gaps = 12/235 (5%) Query: 140 EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP-LSIDSIKGSVIAEGTGNFD 198 ++ D + V + L+ ++ L+ ++ A +D Sbjct: 513 GDANLTATTYAFRDIVAKPVSRPNALSFAMNFDKEQFRITALNYQLAPAALSATAVSRYD 572 Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY-SGVFSVAGDF 257 +F I +N + + ++ L + + + ++ SG +++ Sbjct: 573 G-PVSFDIRSNRFQSGEVGYMVPMARDYRPAGLVQLQLHAAGPDMERLFWSGNAALSNVS 631 Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317 K + ++GN +I+ + ++ L+ K V+ + Sbjct: 632 VKAGDKVRPVS--GVNGNVRINGESFESTQLSLRVGGS----SISGKGTVTGLDHPSFLI 685 Query: 318 SENGAES---MHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369 S + L E+ + D++Q + + + Sbjct: 686 SFSSPSLYLSDLGLVPAKNPVRVERVQGTLAYQNDNLQIAALSGTLGKSPLSLKG 740 >gi|283835905|ref|ZP_06355646.1| AsmA family protein [Citrobacter youngae ATCC 29220] gi|291068076|gb|EFE06185.1| AsmA family protein [Citrobacter youngae ATCC 29220] Length = 686 Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 41/405 (10%), Positives = 109/405 (26%), Gaps = 45/405 (11%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + +F +++V V DW + ++ + + + A++G + + Sbjct: 6 KITASVTGIFLLLIVVFIIVIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + + + Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPDVTMVHLPRVEATLAPLALLTKTVWLPWIKLVK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ + Sbjct: 126 PDARLIRLSEKNNNWTFTLAGDENRDPNAPPSAWSFRLDNILFDQGRIAINDKATRSELE 185 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVI-----AEGTGNFDNKRSAFKITAN--FPAKN 214 + ++ + ++ + V + G ++ + + + Sbjct: 186 IL-VDPLGKPLPFSEVTGAKNKASNARVEDYVFGLQAKGRYNGEPLSGSGKIGGMLALRG 244 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270 + +Q + + G + +GD L Sbjct: 245 EGTPFPVQADFRSGNTRVAFTGTVNDPMNMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPP 304 Query: 271 -----RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAE 323 RL +V + + + + L + Sbjct: 305 FETDGRLVAKIDPEKSSVFDYRDFNGRIGDSD----IHGTLTYTTGKPRPKLEGDVESRQ 360 Query: 324 SMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 + K + + + +K +D+ Sbjct: 361 LRLADLGPLIGVDSGKGAEKAKQSEQRKGEKSVQPADKVLPYDRF 405 >gi|299131900|ref|ZP_07025095.1| AsmA family protein [Afipia sp. 1NLS2] gi|298592037|gb|EFI52237.1| AsmA family protein [Afipia sp. 1NLS2] Length = 978 Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 59/327 (18%), Positives = 124/327 (37%), Gaps = 26/327 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ L+GL + L+ A PLF++W ++ FE +AT +VG + V+G + +LP Sbjct: 1 MQTTLLGLAIAAIMALIAALAAPLFVNWNKYKPQFEAEATRVVGAPVRVEGALDARLLPA 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P + + + +D + + + L + LL GE R + +D L+ L +G Sbjct: 61 PILRLHKLSVGAPKD-PTKLRADKLDVEFSLGSLLRGEWRATQLSLDGLALDIGLDRQGR 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + ++K + GR+ + D+ S L L+ Sbjct: 120 --IIAPSKGEFNFGALAIDKFDLS-GRVALHDEASGSDVDLEGLD-----------FSGD 165 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-PLAYPIIIDLFGNLFW 240 + S+ G++ EG R F++ + + +A L++ L A + L G L + Sbjct: 166 VRSLGGNLRGEGHVLLHGVRQPFRLALSKAGEGEATRLRLDLDSAQAGAMSSSLDGALTF 225 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 +++ P + G ++A R+S + + ++ ++ + Sbjct: 226 DKRIPHFDGAMTLAAA---------GETPWRISAHTALDPSGAAFTQGEILYGAEATGVK 276 Query: 301 EDNKTKVSQDEENLLNFSENGAESMHD 327 +S L + + D Sbjct: 277 LSGHGALSFRPA-KLEMKLSATQLDLD 302 >gi|300955086|ref|ZP_07167491.1| AsmA family protein [Escherichia coli MS 175-1] gi|300317997|gb|EFJ67781.1| AsmA family protein [Escherichia coli MS 175-1] Length = 617 Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMLLLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S F N ++ ISL + YP Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + I + + G ++ + ++ S + ++ L + Sbjct: 214 -------HDLTAAIEQVNWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348 + + + +V+ E+ + D LNET E + Sbjct: 264 ----NDSTLSGQAQVTLTEQPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQTTL 319 Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 S E + + F+ D ++ Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345 >gi|323966042|gb|EGB61482.1| AsmA family protein [Escherichia coli M863] Length = 687 Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 53/409 (12%), Positives = 116/409 (28%), Gaps = 41/409 (10%) Query: 1 MLRRVLIGLGFL---FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI- 56 M+ + + F +++V A + DW + ++ + + + A++G + + Sbjct: 1 MMSKAGKITAAISGTFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVV 60 Query: 57 -----------HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVF 103 +P+P V +DI + D + + L LL+ + + Sbjct: 61 WERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLP 120 Query: 104 DMYIDQPHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQE 155 + +++P S+ +NW + D + L+ I GRI I D+ Sbjct: 121 WIKLEKPDARLIRLSEKNNNWTFNLANDDNKDMNAKPSAWSFRLDNILFDQGRIAIDDKV 180 Query: 156 SDQVYFL----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN-- 209 S + L S + + G ++ + K Sbjct: 181 SKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGM 240 Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK 269 + + +Q + + G + K +GD L Sbjct: 241 LALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLL 300 Query: 270 SR-----LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA 322 G KI + Y+ + S + + L Sbjct: 301 PDTPPFETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESR 360 Query: 323 ESMH-DLNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 + DL + + K+K + KK + K + + + Sbjct: 361 QLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSIQPAGKVLPYDRFETD 409 >gi|269138545|ref|YP_003295245.1| AsmA family protein [Edwardsiella tarda EIB202] gi|267984205|gb|ACY84034.1| AsmA family protein [Edwardsiella tarda EIB202] gi|304558561|gb|ADM41225.1| AsmA [Edwardsiella tarda FL6-60] Length = 594 Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 48/373 (12%), Positives = 107/373 (28%), Gaps = 51/373 (13%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70 L VV G + L I+ DFR +Q G + + G ++ + P S+ + Sbjct: 2 ILLVVVTAGISALLLLINPNDFRAYMIKQVQQRTGYVLTLDGDLRWRVWPQLSILSDRMS 61 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--- 127 + + + + PLLS ++ V + + + S+ Sbjct: 62 LRADGAAQPVIAADNMRLDVRLWPLLSHQLEVRRVMLKGAVIRLTPDSEPTPLPNAPRSP 121 Query: 128 ----KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + DM + + ++ V+ + I + L D+ L I S Sbjct: 122 AVRSEPISDMAWRLNIHQVKVED-SLVIWQAPDGEPINLRDIELNIQQDATRHAS----- 175 Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243 F N ++ +SL+ + YP + Sbjct: 176 ------------------VDFSSRINRDQRDLQLSLQADVDLSRYPQQY----------R 207 Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 + + +G + A + ++ ++ + V +S L + + + Sbjct: 208 ARVDHLEYRYSGAGLPSAGI---AGQGSMTLSYSAAPAAVTLSDLTLSA----NDSQLRG 260 Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDN 363 + + + + D ++ + N D V + Sbjct: 261 EIQGTLAAIPEYRVTLQADNLNWD--GLSGWQAQSADTANADAGNTPPPPPVVSQVAAPE 318 Query: 364 SHDKEN-QENFSG 375 S D+ +FS Sbjct: 319 SSDEMAFLRDFSA 331 >gi|148258039|ref|YP_001242624.1| putative asmA protein, assembly of outer membrane proteins [Bradyrhizobium sp. BTAi1] gi|146410212|gb|ABQ38718.1| putative asmA protein, assembly of outer membrane proteins [Bradyrhizobium sp. BTAi1] Length = 645 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 112/340 (32%), Gaps = 31/340 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+ + L V +G F ++ R E Q + G ++ VKG I + + P Sbjct: 1 MRRLGTPIAVLLGVAFIGLFVSSWLVNRDALRRAVETQIRAVTGLELVVKGHIDVSLFPG 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 V F D+ + +++ L+ + LPLL + D+ + +P +N + G Sbjct: 61 SYVSFHDVGLKGGGTADPALRVDVLTANLQLLPLLLQRFEIADLMLLRPQINVIREANGS 120 Query: 122 SNWFQR------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 SNW + +I ++ G + D + L D++L Sbjct: 121 SNWTPFIATIAHTMRPGPDSQMSFSEIRIQDGVLVFDDNGTRSQERLDDIDL-------- 172 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPIIIDL 234 L+ SI S A G ++ +R I+ + + +++ + P+ + Sbjct: 173 ---SLAWPSISRSFAATGQFDWRGQRIEGSISVSDFLAALSGDRSGLKMRLASPPLKVAF 229 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNL--------ELSAKKSRLSGNFKISDGNVRIS 286 G + N + G +V + + L + ++ ++ Sbjct: 230 DGTVA-NRTSALMEGTLTVDSPSLREALRWTGQTPLGSGGFGRFALRARANVVGASIALT 288 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 ++ + + + L + Sbjct: 289 NVNVEL----DGNTAEGVMTYANNGRQALQATLAADALDF 324 >gi|300718958|ref|YP_003743761.1| hypothetical protein [Erwinia billingiae Eb661] gi|299064794|emb|CAX61914.1| Conserved uncharacterized protein, AsmA family [Erwinia billingiae Eb661] Length = 688 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 53/415 (12%), Positives = 118/415 (28%), Gaps = 46/415 (11%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 +++ + +F ++++ + DW + ++ + + + A++G + + Sbjct: 6 KIISWIVGIFLLLVIVVVIIIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVAWERNRD 65 Query: 57 -----HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V DI + ++ + L LL E+ + + + Q Sbjct: 66 EPGWRSWVPWPHVHADDILLGNPPEIPDVTMVHLQRVDATLAPLALLGKEVYIPWIKLTQ 125 Query: 110 PHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P ++ +NW + L+ I G+I D + Sbjct: 126 PDARLIQTADKKNNWTFNLAGSDNPDPNQPPSAWTFRLDNIMFDRGQIAYRDAINKADVQ 185 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKNK 215 ++ L ++ + S KG+ + +G ++N++ ++K Sbjct: 186 VTVDPLGKPVPYVQVAGSKDDKSQKGASDYVFGWKASGTYNNEKLTGDGKIGGMLSLRSK 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS----- 270 +Q + + G L AGD L Sbjct: 246 TNPFPLQADVRNGTTRVQVAGTLQDPLNLGGLDIRLRFAGDTLANLYGLTGILLPDTPPY 305 Query: 271 ----RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES 324 L F+ G V R + + +Q L S + Sbjct: 306 ETDGHLIARFQQKGGPVFRYENFNGHIGDSD----IHGSMTYTQGKPRPKLEGSLESKQL 361 Query: 325 -MHDLNETDFFEEEEKKNKN--DDLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376 M DL + K K+ D + + D ++ D Sbjct: 362 RMADLGPLIGVNSGKGSEKTEQAKAKRGDATTQPADRVLPHDKFDTKSWGAMDAD 416 >gi|317494471|ref|ZP_07952884.1| AsmA family protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917401|gb|EFV38747.1| AsmA family protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 683 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 62/427 (14%), Positives = 129/427 (30%), Gaps = 60/427 (14%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56 ++ L L + ++V+VG + DW + ++ + + + A++G + + Sbjct: 5 KKTLSWLAGIVALVIVGIVIFVITFDWNRLKPTINQKVSTELNRPFAIRGNLGVDWSRPA 64 Query: 57 ------HILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P+P V +DI + D +E + L LL +I + + + Sbjct: 65 DETGWRSWVPWPHVHAEDIVLGNPADIPAVSMVSLERVDASLSPLALLGKQIYIPRIKLK 124 Query: 109 QPHLNFYLSSKGVSNWFQ---------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159 QP + + G +NW + + ++ I G+I D Sbjct: 125 QPDASLRRLANGKNNWTFELANASNEGQPKDQKSAWSFKIDDIVFDQGKIAYDDAMIGAK 184 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGS---------VIAEGTGNFDNKRSAFKITANF 210 + + L F ++ S S +GT N ++ + KI Sbjct: 185 FKATIDPLGKPLPFSEVVGDSSSAKKVASKKAPDYVFGWKVDGTYNDESLSGSGKIGGML 244 Query: 211 PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270 ++ +Q + + + G L +G L+ Sbjct: 245 ALRDPDGLFPLQADVRSGKTRVAVAGTLSDPLNLGALDLRLQFSGQSLSQLHKLTGIVLP 304 Query: 271 ---------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDE--------- 311 LS K + G + R + + + + Sbjct: 305 DTPPYSTDGHLSAELKRAKGAIYRYQNFNGKIGDSD----IHGSLTYQMSKPRPSLSGEL 360 Query: 312 -ENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL----KKDDIQYSVNKKEEKDNSHD 366 N L F++ D N+ E+ +D + K D Q+S K + Sbjct: 361 VSNQLRFADLAPLIGADSNQEKASRGEKATQPSDKVLPRDKFDTKQWSTMDANVKFTAKR 420 Query: 367 KENQENF 373 E+ E+ Sbjct: 421 IEHGESL 427 >gi|70734114|ref|YP_257754.1| AsmA family protein [Pseudomonas fluorescens Pf-5] gi|68348413|gb|AAY96019.1| AsmA family superfamily [Pseudomonas fluorescens Pf-5] Length = 691 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 39/357 (10%), Positives = 100/357 (28%), Gaps = 43/357 (12%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 F DW + + + + + A+ G + + +P+P V +D+ + Sbjct: 28 FFDWNRIKPTLNAKVSEELHRPFAINGDLSVVWQREPDEGGWRAWVPWPHVVAEDLTLGN 87 Query: 74 KED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR---- 127 + ++ + +R L LL+ + + + + +P + G +NW + Sbjct: 88 PDWSKAPQMVSLKRVELRISPLALLAQRVSIPRIDLTEPDAALQRLADGRANWTFKFDPK 147 Query: 128 -KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS--------DLNLQISARFLNIIS 178 + V + I G + + DQ L + + ++ Sbjct: 148 DPNAEPSNWTVDIGAIGFDKGHVTLDDQSLKTQLDLQVELLGKPIPFSDIVGESEAKKVA 207 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236 ++ + + G + ++ A ++ +Q ++L G Sbjct: 208 EKGAEAQAYAFALKVKGQYHGQKLAGTGKIGGLLALQDSRKPFPLQAQAQIGDTKVELRG 267 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNF-KISDGNVRIS 286 +L +AG L L+ + Sbjct: 268 SLTDPLNLGALDLRLKLAGTSLGNLYPLTGVTLPDSPPYSTDGHLTAKLHDPAGATFSYQ 327 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE-NGAESMHDLNETDFFEEEEKKNK 342 + + + + V+ L+ + + M DL + K+ Sbjct: 328 DFNGKIGDSDIHGNLT---YVASQPRPKLSGALVSNQLLMSDLAPLIGADSNAKQKA 381 >gi|323975074|gb|EGB70183.1| AsmA family protein [Escherichia coli TW10509] Length = 687 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 53/409 (12%), Positives = 116/409 (28%), Gaps = 41/409 (10%) Query: 1 MLRRVLIGLGFL---FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI- 56 M+ + + F +++V A + DW + ++ + + + A++G + + Sbjct: 1 MMSKAGKITAAISGTFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVV 60 Query: 57 -----------HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVF 103 +P+P V +DI + D + + L LL+ + + Sbjct: 61 WERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLP 120 Query: 104 DMYIDQPHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQE 155 + +++P S+ +NW + D + L+ I GRI I D+ Sbjct: 121 WIKLEKPDARLIRLSEKNNNWTFNLANDDNKDMNAKPSAWSFRLDNILFDQGRIAIDDKV 180 Query: 156 SDQVYFL----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN-- 209 S + L S + + G ++ + K Sbjct: 181 SKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGM 240 Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK 269 + + +Q + + G + K +GD L Sbjct: 241 LALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLL 300 Query: 270 SR-----LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA 322 G KI + Y+ + S + + L Sbjct: 301 PDTPPFETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESR 360 Query: 323 ESMH-DLNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 + DL + + K+K + KK + K + + + Sbjct: 361 QLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 409 >gi|152986005|ref|YP_001350922.1| hypothetical protein PSPA7_5601 [Pseudomonas aeruginosa PA7] gi|150961163|gb|ABR83188.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 689 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 51/419 (12%), Positives = 112/419 (26%), Gaps = 46/419 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56 R++L ++L DW + + + + + A+ G + + Sbjct: 5 RKILTWTLASLLLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREE 64 Query: 57 ------HILPFPSVFFKDIRIDQKED------GSFESKIEGLSMRAEFLPLLSGEIRVFD 104 +P+P +DI + + S + +E + R LPLL IR+ Sbjct: 65 GEEGWRAWVPWPRFSAEDITLGNPDWTAGKTRASEFASLERIEFRLAPLPLLWQTIRIPQ 124 Query: 105 MYIDQPHLNFYLSSKGVSNW----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 + + QP + + G +NW S + + +I G + + DQ Sbjct: 125 IKLTQPRADLLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRL 184 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAK 213 + L F + + + G + + + + Sbjct: 185 EVLVDPLGKPVPFGQLAGKALARGDAANAQDYVFGWKVKGTYKGQALSGAGKVGGMLALQ 244 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + + +Q A + G L ++G L Sbjct: 245 DASKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTP 304 Query: 271 ------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGA 322 L K G + R + + + V++ L+ Sbjct: 305 AYSTDGHLLARLKEEGGALFRYENFNGKVGASD----LHGSLTFVARQPRPKLSGKLTSE 360 Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS--HDKENQENFSGDKMI 379 + + + + V EE D + F+G +++ Sbjct: 361 QLRFADLGPLIGADSNAEKQKRGQTARQPGDRVLPVEEFRTERWRDMDADVEFTGKRIV 419 >gi|134094666|ref|YP_001099741.1| hypothetical protein HEAR1443 [Herminiimonas arsenicoxydans] gi|133738569|emb|CAL61614.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 645 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 61/411 (14%), Positives = 132/411 (32%), Gaps = 49/411 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 + +L G G L +++ A + D + QA + +++ + I + + P+P Sbjct: 6 KIMLWGAGGLALALVIAASILYTQTDSAHLKIIARDQARQALARELMLD-EIDLSLFPYP 64 Query: 63 SVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + K+I + G ++ + + LPLLSG I + ++++ N +++ G Sbjct: 65 QLHAKNITLSNPAWAQGQHFLEVSSATAQLALLPLLSGRIILSGLHLEGLQANLEIAADG 124 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISP 179 NW + ++ L + V I+ D + + + + L+ + Sbjct: 125 KRNWEFPDVDAASLSDMTLTSMSVLHSNIRFRDGKKESAQWQVLSLHADGGHGLQRVKFG 184 Query: 180 LSIDSIKGSVIAEGTGNFDNK--------RSAFKITANFPA--KNKAISLKIQLFPLAYP 229 + + + +G + ++ T+ + I L + L Sbjct: 185 MKVVRDNHLLQLDGKLDDLSQLGKPGAVSPGIVHATSGQAKITVSGKIPLDLALQNYDIA 244 Query: 230 III------DLFGNLFWNEKQPI-YSGVFSVAGDFSKL--LNLELSAKKSRLSGNFKISD 280 I D+FG P+ G + K ++ L K LSG+ + D Sbjct: 245 ASIEAESMQDMFGFFGIQRPSPVPLKGEMKLHAANKKTEIADVRLHMGKLNLSGDGRWDD 304 Query: 281 -------------GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + + L P+ + + Q L G + + Sbjct: 305 SGSKPVFHARLQADKIDMVQTFLDIGQPSLPPKKTGQLFRDQALAWPLLLDLEGTQGTAE 364 Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378 +N LK + + D+ E FSG + Sbjct: 365 VN-------------IAALKIRSGIEVADATARMSFNDDRMKVEAFSGKLL 402 >gi|238919216|ref|YP_002932731.1| assembly protein [Edwardsiella ictaluri 93-146] gi|238868785|gb|ACR68496.1| protein AsmA [Edwardsiella ictaluri 93-146] Length = 595 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 95/324 (29%), Gaps = 48/324 (14%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70 L VV G + L I+ DFR +Q G ++ + G ++ + P S+ + Sbjct: 2 ILLVVVAAGISALLLLINPNDFRAYMIKQVQQRTGYRLTLDGDLRWRVWPQLSILSDRMS 61 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--- 127 + + + + PLLS ++ V + + + +S+ Sbjct: 62 LRADGAEQPVIAADNMRLDVRLWPLLSHQLEVRRVMLKGAVIRLTPASEPTPLPNAPRSS 121 Query: 128 ----KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + DM + + ++ V+ + I + L D+ L I S Sbjct: 122 AVRSEPISDMAWRLNIHQVKVED-SLVIWQAPDGEPINLRDIELNIQQDATRHAS----- 175 Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243 F N ++ +SL+ + YP + Sbjct: 176 ------------------VDFSSRINRDQRDLQLSLQADVDLSRYPQQYRARID------ 211 Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 + +G + A + ++ + + V +S L + + + Sbjct: 212 ----HLEYRYSGAGLPSAGI---AGQGSMTLGYSAASAAVTLSDLTLSA----NDSQLRG 260 Query: 304 KTKVSQDEENLLNFSENGAESMHD 327 + + + D + D Sbjct: 261 EIQATLDAIPEYRVTLQADNLDWD 284 >gi|293396965|ref|ZP_06641239.1| AsmA suppressor of OmpF assembly mutants [Serratia odorifera DSM 4582] gi|291420436|gb|EFE93691.1| AsmA suppressor of OmpF assembly mutants [Serratia odorifera DSM 4582] Length = 612 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 93/317 (29%), Gaps = 48/317 (15%) Query: 18 VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG 77 G + L ++ DFR ++ G ++ ++G ++ H+ P S+ + + Sbjct: 17 AGMSALVLLVNPNDFRSYMVKKVEQRSGYQLTLEGDLRWHVWPQLSILAGRMTLTAPGAK 76 Query: 78 SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-------KST 130 + E + + + LPLLS ++ V + + + S+ S + Sbjct: 77 APVVSAENMRLDVKLLPLLSHQLFVKQVMLKNAVIRLTPDSEQQSRTDAPIAPGGSSVES 136 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 +D ++ + V + I + +++ + DLNL + Sbjct: 137 VDTPWKFDIDNLRVAD-SLLIWQRANNEQINVRDLNLTMQRSGDR--------------- 180 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250 N ++ +L L +P N Sbjct: 181 --------QAEMELSSRVNRDQRDLTFNLSADLDLQQFPRQFSTTVN----------QFN 222 Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD 310 + + G ++ + + ++ + ++ L + + + +S Sbjct: 223 YQLEGVDIPTGGIK---GQGSVRAVYQQDPRQLTLNDLMLGV----NDSQLKGRADISLG 275 Query: 311 EENLLNFSENGAESMHD 327 + + D Sbjct: 276 DVPNYVVELSSPHLDMD 292 >gi|152971056|ref|YP_001336165.1| putative assembly protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955905|gb|ABR77935.1| suppressor of ompF assembly mutants [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 607 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 37/326 (11%), Positives = 100/326 (30%), Gaps = 50/326 (15%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70 L +V++ G ++ L ++ DFR + G ++ + G ++ H+ P S+ + Sbjct: 2 ILLAVIVAGLTSLVLLVNPNDFRAYMVHEVAERSGYQLDLDGPLRWHVWPQLSILSGRMT 61 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV--------- 121 + + + + + + LPLLS +++V + + + ++ V Sbjct: 62 LTARGAEEPVIRADNMRLDVALLPLLSHQLQVKQVMLKGAVIQLTPKTEAVRDSSAPVVP 121 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + D + + ++ V + E+ + + D+ LQ+ + + Sbjct: 122 HDNTLPLAPEDRGWSYDVRQLQVAD-SVLFFQHENGEQVTVRDIRLQMEQDENHRAT--- 177 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 F N ++ A++ + YP + Sbjct: 178 --------------------VDFSGRVNRDQRDLALNFSATVQGGDYPHSLKADFT---- 213 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 + + G + + L +++ D +R L + + Sbjct: 214 ------QLSWQLRGAELP---PDGINGQGSLQASWQEDDKTLRFDNLNL----MANRSTV 260 Query: 302 DNKTKVSQDEENLLNFSENGAESMHD 327 V + + + D Sbjct: 261 TGSGSVVLGDRPDWSLDLHATTLDLD 286 >gi|115526074|ref|YP_782985.1| hypothetical protein RPE_4079 [Rhodopseudomonas palustris BisA53] gi|115520021|gb|ABJ08005.1| AsmA family protein [Rhodopseudomonas palustris BisA53] Length = 645 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 112/341 (32%), Gaps = 32/341 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R+ + + L + +VG +P +D R ERQ + G + V G +++ + P Sbjct: 5 IKRLGMSIAALLCLAVVGVMALPGVLDRDSLRAAVERQIRAVTGLDLVVNGDVEVSVFPG 64 Query: 62 PSVFFKDIRI-DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 V F DI + Q L+ + +PLL + D+ + QP ++ + ++ G Sbjct: 65 SYVAFHDIGLRAQASPDVPMLTAPLLTTNLQLIPLLLRRFEIADVVLSQPRIHVFRAADG 124 Query: 121 VSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 SNW R +V ++ ++ G + D+ S + ++L Sbjct: 125 GSNWTPFIEALTRTMKPGAADHVSFSEVRLEDGELNYQDEASQLSGSIGKIDL------- 177 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPIIID 233 L+ +I + A G + +R I+ + ++ P+ I Sbjct: 178 ----SLAWPAISRTFAATGQFEWRGERIDGSISVTDFLAALSGDRSGLRARIAGPPLKIA 233 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRI 285 G + N + G S + + + L + ++ + Sbjct: 234 FDGTV-VNRTNLMLEGTLSADSVSLRNALRWVGQEPPGTGGLGPFALKARANLVGPSLAL 292 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + +Q + S L + Sbjct: 293 TNVNIQI----DKNVAEGVITYSNGGRQSLQATLAAGALDL 329 >gi|107103978|ref|ZP_01367896.1| hypothetical protein PaerPA_01005051 [Pseudomonas aeruginosa PACS2] Length = 689 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 53/419 (12%), Positives = 112/419 (26%), Gaps = 46/419 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56 R++L ++L DW + + + + + A+ G + + Sbjct: 5 RKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREE 64 Query: 57 ------HILPFPSVFFKDIRIDQKED------GSFESKIEGLSMRAEFLPLLSGEIRVFD 104 +P+P +DI + E S + +E + R LPLL IR+ Sbjct: 65 GEEGWRAWIPWPRFSAEDITLGNPEWMAGKTKASEFASLERIEFRLAPLPLLWQTIRIPQ 124 Query: 105 MYIDQPHLNFYLSSKGVSNW----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 + + QP + + G +NW S + + +I G + + DQ Sbjct: 125 IKLTQPRADLLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRL 184 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAK 213 + L F + + + G + + A + Sbjct: 185 EVLVDPLGKPVPFGQLAGKALATGDAANAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQ 244 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + + +Q A + G L ++G L Sbjct: 245 DGSKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTP 304 Query: 271 ------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGA 322 L K G + R + + + V++ L+ Sbjct: 305 AYSTDGHLLARLKEEGGALFRYENFNGKVGASD----LHGSLTFVARQPRPKLSGKLTSE 360 Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS--HDKENQENFSGDKMI 379 + + + + V EE D + F+G +++ Sbjct: 361 QLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIV 419 >gi|288958573|ref|YP_003448914.1| protein [Azospirillum sp. B510] gi|288910881|dbj|BAI72370.1| protein [Azospirillum sp. B510] Length = 1090 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 106/324 (32%), Gaps = 32/324 (9%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFES 81 P IDW ++ + + G+++ ++G + +LP P++ +D R+ Sbjct: 23 PSLIDWNAYKGAIAERVSQATGRRVELRGDLGFTLLPSPALTLRDARLANAAGADEPDMV 82 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV---- 137 +++ L R PLL G I+V + + +P + G NW + + Sbjct: 83 RLKKLDARVALGPLLGGRIQVESIALVEPTFVVEVLKDGRINWDLSSAGPRKGDGLGAAE 142 Query: 138 ------ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA 191 +++ + G + D + + + L+ +I+A S+ G Sbjct: 143 GLVSAVSFDQVLIDNGTVIYRDDRNGRTETVEGLSARIAA-----------GSLTGPFQW 191 Query: 192 EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 +G + TA + A+ ++ L + G L + Sbjct: 192 QGDFRLRGLSLHGEATAGRFTEGAAVPVRATLSLPQTDATLRFAGILAGGTFKVQGDLRA 251 Query: 252 SVAGDFSKLLNLELSAKKS-------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 GDF++L+ SA+ L + + + Q ++ + + Sbjct: 252 E-GGDFARLVETHGSARVPAALAQPFSLRSTVEAGTSLATFTSLEAQLGDTRATGNASLR 310 Query: 305 T-KVSQDEENLLNFSENGAESMHD 327 ++ E + D Sbjct: 311 AGDPTKGEVPRTELTLAINRLDLD 334 >gi|329850776|ref|ZP_08265621.1| asmA family protein [Asticcacaulis biprosthecum C19] gi|328841091|gb|EGF90662.1| asmA family protein [Asticcacaulis biprosthecum C19] Length = 700 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 46/378 (12%), Positives = 111/378 (29%), Gaps = 33/378 (8%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-P 62 + + ++VL+ +W R A+ + + +++ G +++H+ F P Sbjct: 57 WLTRIILGTIALVLLAIIVFLANPNWNWARGIVSSIASDRLNRAVSIDGNLRVHLFSFTP 116 Query: 63 SVFFKDIRIDQKEDG------SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 S ++I + + + ++ L+++ E +PL G + + + + +P++ Y Sbjct: 117 SATVGGLKIAEPDWAIRAGQKQSLADVQSLTVQTELMPLFIGRLVLPRLEVTKPNVFLYQ 176 Query: 117 SSKGVSNWFQRKSTMDMIHN--VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 G +NW ++ ++ G+I + + Sbjct: 177 DKAGQANWDFSDGKKKGEATKLPPIKNFIIREGQIAFNSVQRGITFN------------G 224 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK-AISLKIQLFPLAYPIIID 233 + + S + + G GN + K + + +QL A + Sbjct: 225 TVNAQEKAGSGRQAFQLTGDGNLNGKVFELEAAGGPLLNIRTDRPYPLQLKARAGNTYLT 284 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRY 288 G + G V G+ L R+S + I+ Sbjct: 285 AKGQVTRPFNLGQLVGDVEVKGNNLADLYYLTGLTLPNTPAYRMSAKVTRDERLYHINGI 344 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 + + + KV ++ + + A D + N Sbjct: 345 NGRVGGSD----LNGALKVELQKDGRPYLTGDLASRSLDFQDLGA--VFGATAANTPQGA 398 Query: 349 DDIQYSVNKKEEKDNSHD 366 D + D Sbjct: 399 DVSATPAGASTSRRLLPD 416 >gi|323934694|gb|EGB31084.1| AsmA family protein [Escherichia coli E1520] Length = 686 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 114/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKLSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|330990977|ref|ZP_08314931.1| hypothetical protein SXCC_00885 [Gluconacetobacter sp. SXCC-1] gi|329761798|gb|EGG78288.1| hypothetical protein SXCC_00885 [Gluconacetobacter sp. SXCC-1] Length = 716 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 43/360 (11%), Positives = 110/360 (30%), Gaps = 30/360 (8%) Query: 12 LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71 + V+ V + +F W F ER+A +G+++ + + + I + ++I Sbjct: 26 VLGVLAVAVMALVIFWSWDWFIPMVERRAGAALGRRVTLA-HLHVRIGRVIRITADGVKI 84 Query: 72 DQKEDG---SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR- 127 D+ + + + L + LL G + + + +D+P + G +N+ Sbjct: 85 DEPDGFTTLPPFATADHLMVGLNLWHLLGGTVDLPVIALDRPVVELNGKRDGTANYRFPA 144 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187 + ++ + G++ ++ SD+ Q+ Sbjct: 145 SGGGGSTAMPRIGELDIDAGQMHLVHAGLR-----SDMRAQVHTTPGQGDVQPR------ 193 Query: 188 SVIAEGTGNFDNKRSA--FKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 ++A+ G + + F A ++ + + P + L G + Sbjct: 194 -IVADVRGTYAGQAMTGHFSGGALVSLADRTRPYPVDVDVRHGPTRLTLVGTVDDPLSFA 252 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYKLQSILPNSSTD 300 ++AG LL + ++G+ D VR ++ + Sbjct: 253 GARLRLTLAGPDMSLLYPLTGVVIPQTPAYHVAGSLDYHDRRVRFRDFEGVVGSSD---- 308 Query: 301 EDNKTKVSQDEENLLNFSENGAESMHDLNET-DFFEEEEKKNKNDDLKKDDIQYSVNKKE 359 + + DL + FF ++ + + + + Sbjct: 309 LGGTLSADPHQTVTF-VDTDLHSRHVDLADLGGFFGATPGEHPSTTQQAAEEKAHAASGA 367 >gi|82779558|ref|YP_405907.1| hypothetical protein SDY_4544 [Shigella dysenteriae Sd197] gi|81243706|gb|ABB64416.1| conserved hypothetical protein [Shigella dysenteriae Sd197] Length = 691 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKSANAKPSAWSFRLDNILFDQGRIAIDDEVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|59712358|ref|YP_205134.1| assembly protein [Vibrio fischeri ES114] gi|59480459|gb|AAW86246.1| predicted assembly protein [Vibrio fischeri ES114] Length = 711 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 52/402 (12%), Positives = 117/402 (29%), Gaps = 67/402 (16%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ + + F V+ + L ++ +F+ Q G+++ + G I+ P Sbjct: 1 MKKIALLISIPFIAVIGAVLVLVLLVNPNEFKPLITEQVEAQTGRQLTIDGDIEWRFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + E + + PL E+ + + +D + Sbjct: 61 IGFSIGKMALSNPEGFVEPNLVSFDNAILDLNVRPLFQQEVSIGLITLDGASFTLHTLKN 120 Query: 120 GVSNWF------------------------------QRKSTMDMIHNVILEKIHVKGGRI 149 GV+N ST V L+ I + + Sbjct: 121 GVTNLDGLVAKKETSTVENNNPTAPAEETDVNPEASSATSTEFNGWKVSLQGIALTNAEV 180 Query: 150 KIIDQESDQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNFD------- 198 I D ++ SD+NL I ++ + L D K V +G + Sbjct: 181 LIQDDKAGSKIHFSDMNLSLSQFIPGQWAKLNFDLKGDLGKQKVALKGKTELNIAETLDD 240 Query: 199 ----------------NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW-- 240 NK + T + + +K +L +++ A + ++ Sbjct: 241 ASFKNVEFNASYADAVNKFNDITFTIDQFSFDKWANLVLKVKGKANNLEVNSNSTFALYV 300 Query: 241 --NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 S K + E + +F ++ ++I + L ++ + Sbjct: 301 PKALDLIKIKEFTSTNNVKGKGIPNEDVTAVIGFNSSFALNKSFLKIDKLALSAVDTD-- 358 Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKK 340 K V ++ + F D ++E K Sbjct: 359 --FTGKLSVQLNDIPKVRFDLRSPSIDVDALLATLPKDESSK 398 >gi|270261063|ref|ZP_06189336.1| putative assembly protein [Serratia odorifera 4Rx13] gi|270044547|gb|EFA17638.1| putative assembly protein [Serratia odorifera 4Rx13] Length = 610 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 45/386 (11%), Positives = 117/386 (30%), Gaps = 52/386 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+L L L V++ G + L ++ DFR + G + + G ++ HI P Sbjct: 1 MRRLLTTLVILLVVLVAGMSALVLLVNPNDFRAYMVTKVEQKSGYHLTLDGELRWHIWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF--YLSSK 119 S+ + + + + + + + LPLLS ++ V + + + + Sbjct: 61 LSILAGRMTLTAPGAKAPVVSADNMRLDVKLLPLLSHQLFVKQVMLKNAVIRLTPESEEQ 120 Query: 120 GVSNWFQRKSTM-----DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 N + D ++ + + + I + +++ + D+NL + Sbjct: 121 NQPNAPIAPAGDTEETLDTPWKFDIDNLRIVD-SLLIWQRANNEQINVRDINLVLQQNAN 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 + N ++ S+ + YP I Sbjct: 180 RH-----------------------AQMELSSRVNRDQRDLTFSMAADIDLQQYPRRI-- 214 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 + + + G ++ ++ + + +S+ IL Sbjct: 215 --------AATVTQFNYQLEGADILGGGIKGDGSA---QVAYQQTPQQITLSQL----IL 259 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY- 353 + + V E + + D ++ + + + Sbjct: 260 SANDSQFSGSGSVRFGEVPVYAMNLTSTALNLD--ALSGWQSSSGTQQAVSVTAAPVIAN 317 Query: 354 -SVNKKEEKDNSHDKENQENFSGDKM 378 + + ++ + D Q N + D++ Sbjct: 318 QAEDPQQNLEVLRDFTAQLNLNVDQL 343 >gi|218702289|ref|YP_002409918.1| putative outer membrane biogenesis protein [Escherichia coli IAI39] gi|218372275|emb|CAR20138.1| putative outer membrane biogenesis protein [Escherichia coli IAI39] Length = 691 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 50/388 (12%), Positives = 111/388 (28%), Gaps = 36/388 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LLS + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLSKTVWLPWVKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLASDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + + G ++ + K + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGNADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSV 355 L + + K+ ++ + SV Sbjct: 371 LGPLIGVDSGKGAEKSTRSEQKKGEKSV 398 >gi|281180562|dbj|BAI56892.1| conserved hypothetical protein [Escherichia coli SE15] Length = 691 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLSFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|331675016|ref|ZP_08375773.1| AsmA family protein [Escherichia coli TA280] gi|331067925|gb|EGI39323.1| AsmA family protein [Escherichia coli TA280] Length = 691 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 50/404 (12%), Positives = 119/404 (29%), Gaps = 40/404 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P + +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHIHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLASDDNKDTNAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKN 214 + ++ A + ++ + K + G ++ + K + Sbjct: 191 IF-VDPLGKALPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGMLALRG 249 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR--- 271 + +Q + + G + K +GD L Sbjct: 250 EGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPP 309 Query: 272 --LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH- 326 G KI + Y+ + S + + L + Sbjct: 310 FETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLA 369 Query: 327 DLNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 DL + + K+K + KK + K + + + Sbjct: 370 DLGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|309787514|ref|ZP_07682126.1| asmA family protein [Shigella dysenteriae 1617] gi|308925092|gb|EFP70587.1| asmA family protein [Shigella dysenteriae 1617] Length = 686 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKSANAKPSAWSFRLDNILFDQGRIAIDDEVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|327251168|gb|EGE62861.1| asmA family protein [Escherichia coli STEC_7v] Length = 686 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 52/403 (12%), Positives = 115/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGTFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + D + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDMNAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + K + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSIQPAGKVLPYDRFETD 408 >gi|224588318|gb|ACN58942.1| uncharacterized protein involved in outer membrane biogenesis [uncultured bacterium BLR7] Length = 647 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 121/358 (33%), Gaps = 46/358 (12%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 ++ G+ VV G +VP + ++ E A+ +G+K+ ++G + + + P Sbjct: 2 KLKTGIWIGVGVVAAGLISVPFLLPLDTYKPTIENAASAALGRKVQIRGPLHLAVYPQLG 61 Query: 64 VFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + D+ + I + + AE +PL+SGE+RV ++ + +P ++ ++ G Sbjct: 62 ISLSDVTVANLPGARDGEMIAIGSVLVGAELVPLISGELRVTEIVLQKPVIHLEVAKDGT 121 Query: 122 SNWFQRKSTMDMIHN----------------VILEKIHVKGGRIKIIDQESDQVYFLSDL 165 NW T+ +++ G + D +++ + Sbjct: 122 PNWRLGPQTVANASPSARPANATAAAPAAGGFRFRSVNIDDGELTYFDAATNKTESFHAI 181 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI-SLKIQLF 224 +++ + +PL G++ G+ ++N+ + + + Sbjct: 182 GIRMYLQPGPANAPL-----NGALTINGSVTYNNEPLKIDTKVDRFGPMLNGQPTPLHVG 236 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNF 276 + I D G L + +G + + + G F Sbjct: 237 ITSNIINADFSGTLS---GEGAIAGALKMGAHSVRSFAAWSGHPMPPGNGFGLMAMEGQF 293 Query: 277 KISDG--NVRISRYKLQSILPNSSTD---------EDNKTKVSQDEENLLNFSENGAE 323 +DG +R + S+ ++ ++ + + N GA+ Sbjct: 294 SANDGVYQIRKTHMAFDSMSMSTDIAINTKGPVPEITGLVQIDRLDVNPYLAPGKGAD 351 >gi|330909579|gb|EGH38093.1| uncharacterized protein YhjG [Escherichia coli AA86] Length = 686 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANGDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLSFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|296391716|ref|ZP_06881191.1| hypothetical protein PaerPAb_26344 [Pseudomonas aeruginosa PAb1] Length = 689 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 53/419 (12%), Positives = 112/419 (26%), Gaps = 46/419 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56 R++L ++L DW + + + + + A+ G + + Sbjct: 5 RKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREE 64 Query: 57 ------HILPFPSVFFKDIRIDQKED------GSFESKIEGLSMRAEFLPLLSGEIRVFD 104 +P+P +DI + E S + +E + R LPLL IR+ Sbjct: 65 GEEGWRAWIPWPRFSAEDITLGNPEWTAGKTKASEFASLERIEFRLAPLPLLWQTIRIPQ 124 Query: 105 MYIDQPHLNFYLSSKGVSNW----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 + + QP + + G +NW S + + +I G + + DQ Sbjct: 125 IKLTQPRADLLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRL 184 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAK 213 + L F + + + G + + A + Sbjct: 185 EVLVDPLGKPVPFGQLAGKALATGDAANAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQ 244 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + + +Q A + G L ++G L Sbjct: 245 DASKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTP 304 Query: 271 ------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGA 322 L K G + R + + + V++ L+ Sbjct: 305 AYSTDGHLLARLKEEGGALFRYENFNGKVGASD----LHGSLTFVARQPRPKLSGKLTSE 360 Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS--HDKENQENFSGDKMI 379 + + + + V EE D + F+G +++ Sbjct: 361 QLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIV 419 >gi|293416969|ref|ZP_06659606.1| yhjG protein [Escherichia coli B185] gi|291431545|gb|EFF04530.1| yhjG protein [Escherichia coli B185] Length = 691 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 52/403 (12%), Positives = 115/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++A+ + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKASAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + K + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|301028220|ref|ZP_07191489.1| AsmA family protein [Escherichia coli MS 196-1] gi|299878706|gb|EFI86917.1| AsmA family protein [Escherichia coli MS 196-1] Length = 686 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 112/403 (27%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFKGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|332996213|gb|EGK15840.1| asmA family protein [Shigella flexneri VA-6] Length = 686 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 115/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + +F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGVFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L F + + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYIFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|330807273|ref|YP_004351735.1| hypothetical protein PSEBR_a583 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375381|gb|AEA66731.1| Conserved hypothetical protein; putative exported protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 691 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 97/340 (28%), Gaps = 42/340 (12%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRI 71 F DW + + + + + A+ G + + LP+P V +D+ + Sbjct: 26 IAFFDWNRIKPTLNAKVSEELHRPFAINGNLAVAWQREPEEGGWRAWLPWPHVVAEDLSL 85 Query: 72 DQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-- 127 E ++ + +R L LL+ + + + + +P N + G +NW + Sbjct: 86 GNPEWSKTPQMVTLKRVELRVSPLALLARRVAIPRIDLTEPDANLQRLADGRANWTFQFD 145 Query: 128 ---KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 V + I G + + DQ L L F +I+ + Sbjct: 146 PKDPDAEPSSWVVDIGAIGFDKGHVTLDDQTLKTRLDLLIDPLGKPIPFSDIVGDKAAKK 205 Query: 185 IKG--------SVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDL 234 + + + G + + A ++ + +Q ++L Sbjct: 206 AQDQGAIPQDYAFAFKVDGQYHGQALAGSGKVGGLLALQDASRPFPLQAQAKIAETRVEL 265 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-R 284 G L +AG+ L RL G + R Sbjct: 266 AGTLTDPMNLGALDLRLKLAGNSLAHLYPLTGVTLPDSPPYATDGRLIAKLHEPGGALFR 325 Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 + + + D V+ L+ + + Sbjct: 326 YEAFNGKIGDSDIHGDL---AYVASQPRPKLSGALVSNQL 362 >gi|157156366|ref|YP_001464994.1| AsmA family protein [Escherichia coli E24377A] gi|157078396|gb|ABV18104.1| AsmA family protein [Escherichia coli E24377A] Length = 686 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|26250157|ref|NP_756197.1| hypothetical protein c4335 [Escherichia coli CFT073] gi|227883684|ref|ZP_04001489.1| AsmA family protein [Escherichia coli 83972] gi|300971343|ref|ZP_07171412.1| AsmA family protein [Escherichia coli MS 45-1] gi|26110586|gb|AAN82771.1|AE016768_189 Hypothetical protein yhjG [Escherichia coli CFT073] gi|227839264|gb|EEJ49730.1| AsmA family protein [Escherichia coli 83972] gi|300411267|gb|EFJ94805.1| AsmA family protein [Escherichia coli MS 45-1] gi|307555627|gb|ADN48402.1| AsmA family protein [Escherichia coli ABU 83972] gi|315295422|gb|EFU54752.1| AsmA family protein [Escherichia coli MS 153-1] Length = 691 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|254163446|ref|YP_003046554.1| putative outer membrane biogenesis protein [Escherichia coli B str. REL606] gi|253975347|gb|ACT41018.1| predicted outer membrane biogenesis protein [Escherichia coli B str. REL606] Length = 691 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 51/403 (12%), Positives = 114/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L S Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTSVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|157369821|ref|YP_001477810.1| putative assembly protein [Serratia proteamaculans 568] gi|157321585|gb|ABV40682.1| AsmA family protein [Serratia proteamaculans 568] Length = 611 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 38/367 (10%), Positives = 106/367 (28%), Gaps = 53/367 (14%) Query: 18 VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG 77 G + L ++ DFR + G + + G ++ HI P S+ + + Sbjct: 17 AGMSALVLLVNPNDFRAYMVTKVEQKSGYHLTLDGDLRWHIWPQLSILAGRMTLTAPGAK 76 Query: 78 SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-------KST 130 + + + + + LPLLS ++ V + + + S+ + + + Sbjct: 77 APVVSADNMRLDVKLLPLLSHQLFVKQVMLKNAVIRLTPDSEEQNQPDAPIAPAGHAEES 136 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 +D ++ + V + I + +++ + D+NL + Sbjct: 137 VDTPWKFDIDNLRVVD-SLLIWQRANNEQINVRDINLTLQQNAKR--------------- 180 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250 + N ++ +L + YP I + Sbjct: 181 --------QAQMELSSRVNRNQRDLTFNLAADIDLQQYPRRIAAN----------VTQFS 222 Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD 310 + + G ++ + ++ + + +S+ L + + + Sbjct: 223 YQLEGADILAGGIKGDGSTKVV---YQQTPQQLALSQLSLGV----NDSTFSGGVSIQFG 275 Query: 311 EENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQ 370 E + A D + + + ++ ++ + S + E Sbjct: 276 EIPAYTLNLTSAAVNFDAF-SGWQSSSSQVSQVQNVTSSPVIASQMDDP----QQNLEVL 330 Query: 371 ENFSGDK 377 F+ Sbjct: 331 REFNAQL 337 >gi|116053028|ref|YP_793347.1| hypothetical protein PA14_64510 [Pseudomonas aeruginosa UCBPP-PA14] gi|115588249|gb|ABJ14264.1| putative exported protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 689 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 53/419 (12%), Positives = 111/419 (26%), Gaps = 46/419 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56 R++L ++L DW + + + + + A+ G + + Sbjct: 5 RKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREE 64 Query: 57 ------HILPFPSVFFKDIRIDQKED------GSFESKIEGLSMRAEFLPLLSGEIRVFD 104 +P+P +DI + E S + +E + R LPLL IR+ Sbjct: 65 GEEGWRAWIPWPRFSAEDITLGNPEWTAGKTKASEFASLERIEFRLAPLPLLWQTIRIPQ 124 Query: 105 MYIDQPHLNFYLSSKGVSNW----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 + + QP + + G +NW S + + +I G + + DQ Sbjct: 125 IKLTQPRADLLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRL 184 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAK 213 + L F + + G + + A + Sbjct: 185 EVLVDPLGKPVPFGQLAGKALATGDAADAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQ 244 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + + +Q A + G L ++G L Sbjct: 245 DASKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTP 304 Query: 271 ------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGA 322 L K G + R + + + V++ L+ Sbjct: 305 AYSTDGHLLARLKEEGGALFRYENFNGKVGASD----LHGSLTFVARQPRPKLSGKLTSE 360 Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS--HDKENQENFSGDKMI 379 + + + + V EE D + F+G +++ Sbjct: 361 QLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIV 419 >gi|82545888|ref|YP_409835.1| hypothetical protein SBO_3523 [Shigella boydii Sb227] gi|89110489|ref|AP_004269.1| predicted outer membrane biogenesis protein [Escherichia coli str. K-12 substr. W3110] gi|170018247|ref|YP_001723201.1| AsmA family protein [Escherichia coli ATCC 8739] gi|170083035|ref|YP_001732355.1| outer membrane biogenesis protein [Escherichia coli str. K-12 substr. DH10B] gi|218556074|ref|YP_002388987.1| putative outer membrane biogenesis protein [Escherichia coli IAI1] gi|218697233|ref|YP_002404900.1| putative outer membrane biogenesis protein [Escherichia coli 55989] gi|238902613|ref|YP_002928409.1| putative outer membrane biogenesis protein [Escherichia coli BW2952] gi|253771645|ref|YP_003034476.1| AsmA family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038702|ref|ZP_04872758.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|260846313|ref|YP_003224091.1| putative outer membrane biogenesis protein [Escherichia coli O103:H2 str. 12009] gi|300907581|ref|ZP_07125217.1| AsmA family protein [Escherichia coli MS 84-1] gi|300927982|ref|ZP_07143539.1| AsmA family protein [Escherichia coli MS 187-1] gi|301306830|ref|ZP_07212880.1| AsmA family protein [Escherichia coli MS 124-1] gi|301646052|ref|ZP_07245957.1| AsmA family protein [Escherichia coli MS 146-1] gi|309796161|ref|ZP_07690572.1| AsmA family protein [Escherichia coli MS 145-7] gi|331644233|ref|ZP_08345362.1| AsmA family protein [Escherichia coli H736] gi|332282085|ref|ZP_08394498.1| outer membrane biogenesis protein [Shigella sp. D9] gi|81247299|gb|ABB68007.1| conserved hypothetical protein [Shigella boydii Sb227] gi|85676520|dbj|BAE77770.1| predicted outer membrane biogenesis protein [Escherichia coli str. K12 substr. W3110] gi|169753175|gb|ACA75874.1| AsmA family protein [Escherichia coli ATCC 8739] gi|169890870|gb|ACB04577.1| predicted outer membrane biogenesis protein [Escherichia coli str. K-12 substr. DH10B] gi|218353965|emb|CAV00426.1| putative outer membrane biogenesis protein [Escherichia coli 55989] gi|218362842|emb|CAR00472.1| putative outer membrane biogenesis protein [Escherichia coli IAI1] gi|226839208|gb|EEH71231.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|238862705|gb|ACR64703.1| predicted outer membrane biogenesis protein [Escherichia coli BW2952] gi|253322689|gb|ACT27291.1| AsmA family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253979503|gb|ACT45173.1| predicted outer membrane biogenesis protein [Escherichia coli BL21(DE3)] gi|257761460|dbj|BAI32957.1| predicted outer membrane biogenesis protein [Escherichia coli O103:H2 str. 12009] gi|260447461|gb|ACX37883.1| AsmA family protein [Escherichia coli DH1] gi|300400698|gb|EFJ84236.1| AsmA family protein [Escherichia coli MS 84-1] gi|300463989|gb|EFK27482.1| AsmA family protein [Escherichia coli MS 187-1] gi|300837949|gb|EFK65709.1| AsmA family protein [Escherichia coli MS 124-1] gi|301075723|gb|EFK90529.1| AsmA family protein [Escherichia coli MS 146-1] gi|308120222|gb|EFO57484.1| AsmA family protein [Escherichia coli MS 145-7] gi|309703930|emb|CBJ03271.1| putative outer membrane assembly protein [Escherichia coli ETEC H10407] gi|313848778|emb|CAQ33842.2| predicted outer membrane biogenesis protein [Escherichia coli BL21(DE3)] gi|315062803|gb|ADT77130.1| predicted outer membrane biogenesis protein [Escherichia coli W] gi|315254048|gb|EFU34016.1| AsmA family protein [Escherichia coli MS 85-1] gi|324021174|gb|EGB90393.1| AsmA family protein [Escherichia coli MS 117-3] gi|331036527|gb|EGI08753.1| AsmA family protein [Escherichia coli H736] gi|332104437|gb|EGJ07783.1| outer membrane biogenesis protein [Shigella sp. D9] Length = 691 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|238750209|ref|ZP_04611711.1| hypothetical protein yrohd0001_11430 [Yersinia rohdei ATCC 43380] gi|238711442|gb|EEQ03658.1| hypothetical protein yrohd0001_11430 [Yersinia rohdei ATCC 43380] Length = 702 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 45/408 (11%), Positives = 114/408 (27%), Gaps = 65/408 (15%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 +VL G+ + ++L L DW + + ++ + + A++G + + Sbjct: 6 KVLAGVSAVILLLLAAVIVFVLTFDWNRLKPTINEKVSVELQRPFAIRGNLGVDWSRKDS 65 Query: 58 ------ILPFPSVFFKDIRIDQKE----------------DGSFESKIEGLSMRAEFLPL 95 +P+P + +D+ + ++ + L L Sbjct: 66 QPGWRGWVPWPHIHAEDLVLGNPANLVSEQGADKTQSTSFPAGEMVTLKRVDASIAPLAL 125 Query: 96 LSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------FQRKSTMDMIHNVILEKIHVKGGR 148 L+ ++ + +++ QP N + G +NW + + +V + I G Sbjct: 126 LAKKVVIPRIWLTQPDANLRRLANGKNNWTFNLANSPTQGDSSPSSWSVNIHDIVFDRGE 185 Query: 149 IKIIDQESDQVYFL------------SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196 I + D + + ++ + + ++ + G Sbjct: 186 INLQDAILKADLQVVIDPLGKPLPFAEVIGVRNQKTGNQLADKVKSNTADYIFGWKVEGK 245 Query: 197 FDNKRSAFKITANFPA--KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254 + + + + +Q + + G L + + Sbjct: 246 YQGQPLTGSGKMGGMLSMSDANVPFPLQADVRSGTTRATVVGTLTDPGNLAGLDLQLTFS 305 Query: 255 GDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNK 304 G L + RL + K SDG V R + + + + Sbjct: 306 GTSLDNLYPLIGVLLPATPPYNTDGRLITSLKQSDGTVYRYENFNGKIGESDIHGNLTYT 365 Query: 305 TK------VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346 + L F++ D N+ E + + + Sbjct: 366 ARQPRPSLAGNLSSEKLRFTDLAPLIGADSNQEKARRGERNRQPANKV 413 >gi|91213030|ref|YP_543016.1| hypothetical protein UTI89_C4056 [Escherichia coli UTI89] gi|117625807|ref|YP_859130.1| putative outer membrane biogenesis protein YhjG [Escherichia coli APEC O1] gi|218691808|ref|YP_002400020.1| putative outer membrane biogenesis protein [Escherichia coli ED1a] gi|237703293|ref|ZP_04533774.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|91074604|gb|ABE09485.1| hypothetical protein YhjG [Escherichia coli UTI89] gi|115514931|gb|ABJ03006.1| putative outer membrane biogenesis protein YhjG [Escherichia coli APEC O1] gi|218429372|emb|CAR10334.2| putative outer membrane biogenesis protein [Escherichia coli ED1a] gi|226902557|gb|EEH88816.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|315286206|gb|EFU45642.1| AsmA family protein [Escherichia coli MS 110-3] gi|315295818|gb|EFU55135.1| AsmA family protein [Escherichia coli MS 16-3] Length = 691 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|300916749|ref|ZP_07133460.1| AsmA family protein [Escherichia coli MS 115-1] gi|300415971|gb|EFJ99281.1| AsmA family protein [Escherichia coli MS 115-1] Length = 691 Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|300936728|ref|ZP_07151627.1| AsmA family protein [Escherichia coli MS 21-1] gi|300458160|gb|EFK21653.1| AsmA family protein [Escherichia coli MS 21-1] Length = 691 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 49/388 (12%), Positives = 109/388 (28%), Gaps = 36/388 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LLS + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLSKTVWLPWVKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLASDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSV 355 L + + K+ ++ + SV Sbjct: 371 LGPLIGVDSGKGAEKSTRSEQKKGEKSV 398 >gi|15600072|ref|NP_253566.1| hypothetical protein PA4879 [Pseudomonas aeruginosa PAO1] gi|254238402|ref|ZP_04931725.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|9951153|gb|AAG08264.1|AE004901_6 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|126170333|gb|EAZ55844.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] Length = 689 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 53/419 (12%), Positives = 111/419 (26%), Gaps = 46/419 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56 R++L ++L DW + + + + + A+ G + + Sbjct: 5 RKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREE 64 Query: 57 ------HILPFPSVFFKDIRIDQKED------GSFESKIEGLSMRAEFLPLLSGEIRVFD 104 +P+P +DI + E S + +E + R LPLL IR+ Sbjct: 65 GEEGWRAWIPWPRFSAEDITLGNPEWTAGKTKASEFASLERIEFRLAPLPLLWQTIRIPQ 124 Query: 105 MYIDQPHLNFYLSSKGVSNW----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 + + QP + G +NW S + + +I G + + DQ Sbjct: 125 IKLTQPRAELLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRL 184 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAK 213 + L F + + + G + + A + Sbjct: 185 EVLVDPLGKPVPFGQLAGKALATGDAANAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQ 244 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + + +Q A + G L ++G L Sbjct: 245 DASKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTP 304 Query: 271 ------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGA 322 L K G + R + + + V++ L+ Sbjct: 305 AYSTDGHLLARLKEEGGALFRYENFNGKVGASD----LHGSLTFVARQPRPKLSGKLTSE 360 Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS--HDKENQENFSGDKMI 379 + + + + V EE D + F+G +++ Sbjct: 361 QLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIV 419 >gi|218893974|ref|YP_002442843.1| hypothetical protein PLES_52651 [Pseudomonas aeruginosa LESB58] gi|218774202|emb|CAW30019.1| putative exported protein [Pseudomonas aeruginosa LESB58] Length = 689 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 53/419 (12%), Positives = 111/419 (26%), Gaps = 46/419 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56 R++L ++L DW + + + + + A+ G + + Sbjct: 5 RKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREE 64 Query: 57 ------HILPFPSVFFKDIRIDQKED------GSFESKIEGLSMRAEFLPLLSGEIRVFD 104 +P+P +DI + E S + +E + R LPLL IR+ Sbjct: 65 GEEGWRAWIPWPRFSAEDITLGNPEWAAGKTKASEFASLERIEFRLAPLPLLWQTIRIPQ 124 Query: 105 MYIDQPHLNFYLSSKGVSNW----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 + + QP + G +NW S + + +I G + + DQ Sbjct: 125 IKLTQPRAELLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRL 184 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAK 213 + L F + + + G + + A + Sbjct: 185 EVLVDPLGKPVPFGQLAGKALATGDAANAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQ 244 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + + +Q A + G L ++G L Sbjct: 245 DASKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTP 304 Query: 271 ------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGA 322 L K G + R + + + V++ L+ Sbjct: 305 AYSTDGHLLARLKEEGGALFRYENFNGKVGASD----LHGSLTFVARQPRPKLSGKLTSE 360 Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS--HDKENQENFSGDKMI 379 + + + + V EE D + F+G +++ Sbjct: 361 QLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIV 419 >gi|238761242|ref|ZP_04622219.1| hypothetical protein ykris0001_35940 [Yersinia kristensenii ATCC 33638] gi|238761495|ref|ZP_04622471.1| hypothetical protein ykris0001_22350 [Yersinia kristensenii ATCC 33638] gi|238700469|gb|EEP93210.1| hypothetical protein ykris0001_22350 [Yersinia kristensenii ATCC 33638] gi|238700722|gb|EEP93462.1| hypothetical protein ykris0001_35940 [Yersinia kristensenii ATCC 33638] Length = 709 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 47/428 (10%), Positives = 116/428 (27%), Gaps = 69/428 (16%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 +VL G+G + ++L + DW + + + + + A++G + + Sbjct: 6 KVLAGIGGVIVLLLAAVIVFIMTFDWNRLKPTINEKVSTELQRPFAIRGNLGVDWSRKGD 65 Query: 58 ------ILPFPSVFFKDIRIDQKE-----------------------DGSFESKIEGLSM 88 +P+P + +D+ + ++ + Sbjct: 66 EPGWRGWVPWPHIHAEDLVLGNPANLVSDKTAGQAHSAAGNAESTAFPTGEMVTLKRVDA 125 Query: 89 RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ-------RKSTMDMIHNVILEK 141 L LL+ E+ + +++ QP + + G +NW + +V ++ Sbjct: 126 SIAPLALLTKEVWIPRIWLTQPDAHLLRLANGENNWTFNLANNTEEDKSTVSDWSVNIDD 185 Query: 142 IHVKGGRIKIIDQ--ESDQVYFLSDL-------NLQISARFLNIISPLSIDSIKGS---V 189 I G+I + D ++D + L + + P Sbjct: 186 IVFDRGQINLKDAVLKADLQVVIDPLGKPLPFAEVSGARNEKKEKQPAEKTQNNAPDFVF 245 Query: 190 IAEGTGNFDNKRSAFKITANFPA--KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 + G + + + + +Q + + + G L Sbjct: 246 GWKVDGKYQGQPLTGSGKIGGMLSMSDASTPFPLQADVRSGSTRVAVAGTLTDPGNLAGL 305 Query: 248 SGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQSILPNS 297 +G L + RL + K + G V R + + + Sbjct: 306 DLQLKFSGASLDNLYPLIGVLLPATPPYNTDGRLIASLKPAGGAVYRYENFNGKIGDSD- 364 Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNK 357 N + L + + + + ++ N + V Sbjct: 365 --IHGNLAYTASQPRPKLTGNMSSDKLRFADLAPLIGADSNQEKANRGERSRQPSNKVLP 422 Query: 358 KEEKDNSH 365 E+ D Sbjct: 423 TEKFDTKS 430 >gi|254244226|ref|ZP_04937548.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126197604|gb|EAZ61667.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 689 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 53/419 (12%), Positives = 111/419 (26%), Gaps = 46/419 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56 R++L ++L DW + + + + + A+ G + + Sbjct: 5 RKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREE 64 Query: 57 ------HILPFPSVFFKDIRIDQKED------GSFESKIEGLSMRAEFLPLLSGEIRVFD 104 +P+P +DI + E S + +E + R LPLL IR+ Sbjct: 65 GEEGWRAWIPWPRFSAEDITLGNPEWTAGKTKASEFASLERIEFRLAPLPLLWQTIRIPQ 124 Query: 105 MYIDQPHLNFYLSSKGVSNW----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 + + QP + G +NW S + + +I G + + DQ Sbjct: 125 IKLTQPRAELLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRL 184 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAK 213 + L F + + + G + + A + Sbjct: 185 EVLVDPLGKPVPFGQLAGKALATGDAANAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQ 244 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + + +Q A + G L ++G L Sbjct: 245 DASKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTP 304 Query: 271 ------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGA 322 L K G + R + + + V++ L+ Sbjct: 305 AYSTDGHLLARLKEEGGALFRYENFNGKVGASD----LHGSLTFVARQPRPKLSGKLTSE 360 Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS--HDKENQENFSGDKMI 379 + + + + V EE D + F+G +++ Sbjct: 361 QLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIV 419 >gi|331655150|ref|ZP_08356149.1| AsmA family protein [Escherichia coli M718] gi|331047165|gb|EGI19243.1| AsmA family protein [Escherichia coli M718] Length = 691 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 51/403 (12%), Positives = 114/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + D + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKNANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|301046593|ref|ZP_07193733.1| AsmA family protein [Escherichia coli MS 185-1] gi|300301431|gb|EFJ57816.1| AsmA family protein [Escherichia coli MS 185-1] Length = 607 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|323174172|gb|EFZ59800.1| asmA family protein [Escherichia coli LT-68] Length = 686 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 44/377 (11%), Positives = 101/377 (26%), Gaps = 35/377 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDYNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328 G KI + Y+ + S + + L + Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 329 NETDFFEEEEKKNKNDD 345 + K + Sbjct: 366 LGPLIGVDSGKGAEKSK 382 >gi|331665145|ref|ZP_08366046.1| AsmA family protein [Escherichia coli TA143] gi|331057655|gb|EGI29641.1| AsmA family protein [Escherichia coli TA143] Length = 686 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDGNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGEADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|323939496|gb|EGB35705.1| AsmA family protein [Escherichia coli E482] Length = 686 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|313109875|ref|ZP_07795807.1| hypothetical protein PA39016_002120009 [Pseudomonas aeruginosa 39016] gi|310882309|gb|EFQ40903.1| hypothetical protein PA39016_002120009 [Pseudomonas aeruginosa 39016] Length = 689 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 53/419 (12%), Positives = 111/419 (26%), Gaps = 46/419 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56 R++L ++L DW + + + + + A+ G + + Sbjct: 5 RKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREE 64 Query: 57 ------HILPFPSVFFKDIRIDQKED------GSFESKIEGLSMRAEFLPLLSGEIRVFD 104 +P+P +DI + E S + +E + R LPLL IR+ Sbjct: 65 GEEGWRAWIPWPRFSAEDITLGNPEWTAGKTKASEFASLERIEFRLAPLPLLWQTIRIPQ 124 Query: 105 MYIDQPHLNFYLSSKGVSNW----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 + + QP + G +NW S + + +I G + + DQ Sbjct: 125 IKLTQPRAELLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRL 184 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAK 213 + L F + + + G + + A + Sbjct: 185 EVLVDPLGKPVPFGQLAGKALATGDAANAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQ 244 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + + +Q A + G L ++G L Sbjct: 245 DASKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTP 304 Query: 271 ------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGA 322 L K G + R + + + V++ L+ Sbjct: 305 AYSTDGHLLARLKEEGGALFRYENFNGKVGASD----LHGSLTFVARQPRPKLSGKLTSE 360 Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS--HDKENQENFSGDKMI 379 + + + + V EE D + F+G +++ Sbjct: 361 QLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIV 419 >gi|222035234|emb|CAP77979.1| Uncharacterized protein yhjG [Escherichia coli LF82] Length = 691 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|215488801|ref|YP_002331232.1| predicted outer membrane biogenesis protein [Escherichia coli O127:H6 str. E2348/69] gi|215266873|emb|CAS11314.1| predicted outer membrane biogenesis protein [Escherichia coli O127:H6 str. E2348/69] Length = 691 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|332084580|gb|EGI89774.1| asmA family protein [Shigella boydii 5216-82] Length = 686 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPKVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|284923549|emb|CBG36644.1| putative outer membrane assembly protein [Escherichia coli 042] Length = 691 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 53/403 (13%), Positives = 116/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVEWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + D + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDTNAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + A K + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLAGKGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLVD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSIQPAGKVLPYDRFETD 413 >gi|15833658|ref|NP_312431.1| hypothetical protein ECs4404 [Escherichia coli O157:H7 str. Sakai] gi|291284896|ref|YP_003501714.1| hypothetical protein G2583_4260 [Escherichia coli O55:H7 str. CB9615] gi|13363878|dbj|BAB37827.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|209755478|gb|ACI76051.1| hypothetical protein ECs4404 [Escherichia coli] gi|209755480|gb|ACI76052.1| hypothetical protein ECs4404 [Escherichia coli] gi|209755482|gb|ACI76053.1| hypothetical protein ECs4404 [Escherichia coli] gi|209755484|gb|ACI76054.1| hypothetical protein ECs4404 [Escherichia coli] gi|209755486|gb|ACI76055.1| hypothetical protein ECs4404 [Escherichia coli] gi|290764769|gb|ADD58730.1| hypothetical protein G2583_4260 [Escherichia coli O55:H7 str. CB9615] Length = 691 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|218560599|ref|YP_002393512.1| outer membrane biogenesis protein [Escherichia coli S88] gi|218367368|emb|CAR05147.1| putative outer membrane biogenesis protein [Escherichia coli S88] Length = 687 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|218707153|ref|YP_002414672.1| putative outer membrane biogenesis protein [Escherichia coli UMN026] gi|300897305|ref|ZP_07115740.1| AsmA family protein [Escherichia coli MS 198-1] gi|218434250|emb|CAR15168.1| putative outer membrane biogenesis protein [Escherichia coli UMN026] gi|300358929|gb|EFJ74799.1| AsmA family protein [Escherichia coli MS 198-1] Length = 691 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 53/403 (13%), Positives = 116/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVEWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + D + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDTNAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + A K + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLAGKGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSIQPAGKVLPYDRFETD 413 >gi|170680242|ref|YP_001745794.1| AsmA family protein [Escherichia coli SMS-3-5] gi|170517960|gb|ACB16138.1| AsmA family protein [Escherichia coli SMS-3-5] Length = 686 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 48/388 (12%), Positives = 109/388 (28%), Gaps = 36/388 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLELLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLGNDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSV 355 L + + K+ ++ + SV Sbjct: 366 LGPLIGVDSGKGAEKSTRSEQKKGEKSV 393 >gi|209884257|ref|YP_002288114.1| AsmA [Oligotropha carboxidovorans OM5] gi|209872453|gb|ACI92249.1| AsmA [Oligotropha carboxidovorans OM5] Length = 660 Score = 130 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 96/308 (31%), Gaps = 11/308 (3%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+ + + + V+ G ID R E Q G ++AV G I + P Sbjct: 6 IRRLALPVAVVLGVLFAGLLAGSWLIDREAVRAAVEAQIRDATGLELAVSGRTDISLFPS 65 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 V + + + + + L + L++G RV D+ + P ++ + G Sbjct: 66 ARVTLDGVALKGATNDEPPLRSDRLQAKLSLFGLIAGHTRVTDVVLLAPRIHVSVDQDGR 125 Query: 122 SNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 SNW + +V + + G + D +++ + ++L IS + Sbjct: 126 SNWAPVIQAFAQSVKPAATRDVWFSDVRITDGTLLYRDTKNNLKETVGGIDLAISLPSSS 185 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKI-TANFPAKNKAISLKIQLFPLAYPIIIDL 234 + + ++ + +G + +A + K LK+ L Sbjct: 186 RVFSMRGEATWHNERLDGNFTIADFLAAVNGEKSGLKVKLVGTPLKLSFDG-TMTNRSSL 244 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 P G+ AG N L + +V ++ Sbjct: 245 LLEGTLAADMPSLRGMMRWAGHELPGAN---GFGPFSLKARANLVGSSVALTNVNTTLDG 301 Query: 295 PNSSTDED 302 + Sbjct: 302 NAAEGVLT 309 >gi|149201230|ref|ZP_01878205.1| AsmA family protein [Roseovarius sp. TM1035] gi|149145563|gb|EDM33589.1| AsmA family protein [Roseovarius sp. TM1035] Length = 645 Score = 130 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 56/388 (14%), Positives = 105/388 (27%), Gaps = 26/388 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R + LG L V+L F+ Q T G+++ + G KI P Sbjct: 1 MRWIFRALG-LVMVMLAIVLGALFFLPGERIARIAADQITKATGRQVTMSGDTKISFYPI 59 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V + I + + + L + E L G+IR+ + P + + Sbjct: 60 LGVSTGAVEIANADWSDAGPMLRADSLKIGVEPQALFGGDIRITGLEAVNPAIRLERARD 119 Query: 120 GVSNW------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 G NW + L++ + G + D + V S+L+ Sbjct: 120 GQVNWELGVEGVAPSGQSDGPLATSNRLALTLDRALITGASLSYTDHATGTVQAFSNLDF 179 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 + + + +GS G+ D + + F Sbjct: 180 DLRWPDYDGTATFEAVLRQGSAPVTLAGHLDQVGQFIDGAVTGLSARLSGPGGSVAFAGR 239 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK-----SRLSGNFKISDGN 282 L G L + + G L L A L+ +S N Sbjct: 240 GGAQPQLQGRLDIDLG--DTDAFLAALGLDRLELPPSLGASIKGGTDLTLTDALDLSLRN 297 Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN---GAESMHDLNETDFFEEEEK 339 + ++ +I + + N + GA+S + + Sbjct: 298 LTLN-LGGNAIAGAADIALGGDVPRINAQINAGALDLSRFAGADSTGSASPDSGWSTSPI 356 Query: 340 KNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 L +I + D K Sbjct: 357 DASALALANGEIALVADSVNLGDLKLGK 384 >gi|262274491|ref|ZP_06052302.1| AsmA protein [Grimontia hollisae CIP 101886] gi|262221054|gb|EEY72368.1| AsmA protein [Grimontia hollisae CIP 101886] Length = 715 Score = 130 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 58/422 (13%), Positives = 122/422 (28%), Gaps = 57/422 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++ L L L +V+V + FI+ DF+ + G+++ + G I P Sbjct: 1 MKKFLSILLGLLLLVVVAVGAIIAFINPNDFKPLIANEVKKTTGRELVIDGDISWRFWPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + + K++ + +PLLS + + + + + Sbjct: 61 LGLSVEQLAFKNPQGFAEPDMLKLDKAELSVAVMPLLSDTLDIGLVSLHGARIFIQTLPN 120 Query: 120 GVSNWFQRKSTMDM-----------------------IHNVILEKIHVKGGRIKIIDQES 156 GVSN + + + + + D + Sbjct: 121 GVSNLDGLSGETATETAPAENPEPVSNASSPAQASAADWTISIGGLELLDASATVRDDNA 180 Query: 157 DQVYFLSDLNLQISARFLNIISP--LSIDSIKGSVIAEGTGNFDN-----------KRSA 203 +S LNL I + P +D + ++ G+ + + Sbjct: 181 GTQSEISKLNLTIGKLETGVWVPIEFDVDGKQNALAFSAKGDAEAMIDKEIMKSQLRALT 240 Query: 204 FKITANFPAKN-KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV-----------F 251 TA+ + SLK L P++ D ++ SG Sbjct: 241 LAATASDAQTQLDSFSLKADRLGLGIPMVFDFSAKGKASDMAFDASGKTTAQIDEGVSLI 300 Query: 252 SVAGDFS----KLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + +G +L K +SG+ + ++ KL++ D K + Sbjct: 301 TASGLSLETTVSGTSLPRPEMKISVSGDVAFDNKAQTLAVEKLKA--AVDELGFDGKVSI 358 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + E + F + D E +K + + K D Sbjct: 359 ALAEIPSIRFDVHSPSINLDTFP-GGRAESTEKPASSGSEGIGSGRGDKSVGAKQPLSDV 417 Query: 368 EN 369 E Sbjct: 418 EP 419 >gi|306816124|ref|ZP_07450262.1| putative outer membrane biogenesis protein [Escherichia coli NC101] gi|331659831|ref|ZP_08360769.1| AsmA family protein [Escherichia coli TA206] gi|294493686|gb|ADE92442.1| AsmA family protein [Escherichia coli IHE3034] gi|305850520|gb|EFM50977.1| putative outer membrane biogenesis protein [Escherichia coli NC101] gi|307628603|gb|ADN72907.1| putative outer membrane biogenesis protein [Escherichia coli UM146] gi|323949765|gb|EGB45649.1| AsmA family protein [Escherichia coli H252] gi|323954934|gb|EGB50714.1| AsmA family protein [Escherichia coli H263] gi|331053046|gb|EGI25079.1| AsmA family protein [Escherichia coli TA206] Length = 686 Score = 130 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|320193964|gb|EFW68597.1| hypothetical protein YhjG [Escherichia coli WV_060327] Length = 686 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLASDDNKDTNAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|157163003|ref|YP_001460321.1| AsmA family protein [Escherichia coli HS] gi|187731640|ref|YP_001882213.1| AsmA family protein [Shigella boydii CDC 3083-94] gi|191165260|ref|ZP_03027103.1| AsmA family protein [Escherichia coli B7A] gi|193061773|ref|ZP_03042870.1| AsmA family protein [Escherichia coli E22] gi|193068565|ref|ZP_03049527.1| AsmA family protein [Escherichia coli E110019] gi|194428686|ref|ZP_03061223.1| AsmA family protein [Escherichia coli B171] gi|194431230|ref|ZP_03063523.1| AsmA family protein [Shigella dysenteriae 1012] gi|194435675|ref|ZP_03067778.1| AsmA family protein [Escherichia coli 101-1] gi|209920984|ref|YP_002295068.1| hypothetical protein ECSE_3793 [Escherichia coli SE11] gi|226524754|ref|NP_417981.2| Inner membrane protein, AsmA family [Escherichia coli str. K-12 substr. MG1655] gi|256020871|ref|ZP_05434736.1| predicted outer membrane biogenesis protein [Shigella sp. D9] gi|256025751|ref|ZP_05439616.1| predicted outer membrane biogenesis protein [Escherichia sp. 4_1_40B] gi|307140213|ref|ZP_07499569.1| putative outer membrane biogenesis protein [Escherichia coli H736] gi|307314348|ref|ZP_07593955.1| AsmA family protein [Escherichia coli W] gi|312972205|ref|ZP_07786379.1| asmA family protein [Escherichia coli 1827-70] gi|269849716|sp|P37645|YHJG_ECOLI RecName: Full=Uncharacterized protein yhjG gi|157068683|gb|ABV07938.1| AsmA family protein [Escherichia coli HS] gi|187428632|gb|ACD07906.1| AsmA family protein [Shigella boydii CDC 3083-94] gi|190904662|gb|EDV64368.1| AsmA family protein [Escherichia coli B7A] gi|192932563|gb|EDV85160.1| AsmA family protein [Escherichia coli E22] gi|192958216|gb|EDV88657.1| AsmA family protein [Escherichia coli E110019] gi|194413269|gb|EDX29554.1| AsmA family protein [Escherichia coli B171] gi|194420685|gb|EDX36761.1| AsmA family protein [Shigella dysenteriae 1012] gi|194425218|gb|EDX41202.1| AsmA family protein [Escherichia coli 101-1] gi|209914243|dbj|BAG79317.1| conserved hypothetical protein [Escherichia coli SE11] gi|226510981|gb|AAC76549.2| Inner membrane protein, AsmA family [Escherichia coli str. K-12 substr. MG1655] gi|306906063|gb|EFN36583.1| AsmA family protein [Escherichia coli W] gi|310334582|gb|EFQ00787.1| asmA family protein [Escherichia coli 1827-70] gi|315138100|dbj|BAJ45259.1| putative outer membrane biogenesis protein [Escherichia coli DH1] gi|323160581|gb|EFZ46522.1| asmA family protein [Escherichia coli E128010] gi|323182675|gb|EFZ68077.1| asmA family protein [Escherichia coli 1357] gi|323376609|gb|ADX48877.1| AsmA family protein [Escherichia coli KO11] gi|323959455|gb|EGB55112.1| AsmA family protein [Escherichia coli H489] gi|323971382|gb|EGB66621.1| AsmA family protein [Escherichia coli TA007] gi|324116605|gb|EGC10522.1| AsmA family protein [Escherichia coli E1167] gi|332084041|gb|EGI89248.1| asmA family protein [Shigella dysenteriae 155-74] gi|332089576|gb|EGI94680.1| asmA family protein [Shigella boydii 3594-74] gi|332345487|gb|AEE58821.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 686 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|331685179|ref|ZP_08385765.1| AsmA family protein [Escherichia coli H299] gi|331077550|gb|EGI48762.1| AsmA family protein [Escherichia coli H299] Length = 686 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 51/403 (12%), Positives = 114/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + D + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDTNAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|300815261|ref|ZP_07095486.1| AsmA family protein [Escherichia coli MS 107-1] gi|300532153|gb|EFK53215.1| AsmA family protein [Escherichia coli MS 107-1] Length = 691 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 49/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISVAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G K+ + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKVDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|324007323|gb|EGB76542.1| AsmA family protein [Escherichia coli MS 57-2] Length = 691 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGEVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|74314222|ref|YP_312641.1| hypothetical protein SSON_3867 [Shigella sonnei Ss046] gi|73857699|gb|AAZ90406.1| conserved hypothetical protein [Shigella sonnei Ss046] Length = 691 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 112/403 (27%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWFKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|297539909|ref|YP_003675678.1| AsmA family protein [Methylotenera sp. 301] gi|297259256|gb|ADI31101.1| AsmA family protein [Methylotenera sp. 301] Length = 983 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 61/408 (14%), Positives = 123/408 (30%), Gaps = 42/408 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ L G+G L +VL+ + + D+++ + + + G IK+ P Sbjct: 5 LKYSLYGVGGLIGLVLIAVGIIAATFNPNDYKQKVIDLVQEKKERTLKLDGDIKLAFWPK 64 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + + + ++ + + G+ + LPLL E+ V +YID N G Sbjct: 65 IGADLGKVSLSEHKNSKEFASLNGVKVSLALLPLLKKELVVDTVYIDGAQANIVKYKDGT 124 Query: 122 SNWFQ--RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 +N+ K ++ +++ + D+ + Y +S NL+ L Sbjct: 125 TNFDDLMSKEEESQDIKFDIDGVNITNSSLSYSDEGTGAKYNISKFNLKSGHIALAEPVD 184 Query: 180 LSIDS--------IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 ++ D I + +G D + F A + + + + Sbjct: 185 ITTDFAVNSNQPEIAANANLKGNFLVDPETKHFVAKGLDAAIKGDL---LGGKNVDVTLS 241 Query: 232 IDLFG-----NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS------------- 273 D+ + + + SG F+ A +L +L+A+K ++ Sbjct: 242 GDVDAKPESREFLVDSLKLVGSGQFNEAKLSIELNAPKLNAQKDEVTSKKTTVTLMQEKA 301 Query: 274 ----------GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ-DEENLLNFSENGA 322 + K S + S + K L F Sbjct: 302 GDTFKANLELADIKGSPKALESSGITGEISAVQGKRTVTGKFSSPFSGNLESLIFDLPKL 361 Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQ 370 D+ + K N D N K + K N Sbjct: 362 AGNLDIKDPSLPNGGMKGLFNLSAHTDIKNELANSKFSLNIDDTKLNG 409 >gi|312968153|ref|ZP_07782363.1| asmA family protein [Escherichia coli 2362-75] gi|312286978|gb|EFR14888.1| asmA family protein [Escherichia coli 2362-75] gi|312948083|gb|ADR28910.1| putative outer membrane biogenesis protein [Escherichia coli O83:H1 str. NRG 857C] Length = 686 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|27382205|ref|NP_773734.1| hypothetical protein blr7094 [Bradyrhizobium japonicum USDA 110] gi|27355376|dbj|BAC52359.1| blr7094 [Bradyrhizobium japonicum USDA 110] Length = 666 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 116/340 (34%), Gaps = 31/340 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R+ + L V L+ I+ R+ E Q + G +++V G I I +LP Sbjct: 29 MKRLGTPIAALLGVALIALIATSWLINRDALRKAVEAQIRDVTGLELSVAGPIDISVLPA 88 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + F D+ + +++ L+ LPLL + D+ + +P ++ L G Sbjct: 89 SYISFHDVGLKGGGTSDPALRVDVLTANLRLLPLLLQRFEIADLTLLRPRIHVSLKPDGE 148 Query: 122 SNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 SNW R + V +I ++ G + D + D++L Sbjct: 149 SNWTPFIQTIARTMKPGAENQVSFSEIRIQDGVLNYEDAATHATEQFDDIDL-------- 200 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT-ANFPAKNKAISLKIQLFPLAYPIIIDL 234 L+ SI S A G ++ +R I+ A+F A ++ + P+ + Sbjct: 201 ---SLAWPSISRSFAATGQFDWRGERVDGSISFADFVAALSGDRSGLKARIASAPLKLAF 257 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRIS 286 G++ N P+ G ++ + + L + ++ ++ Sbjct: 258 DGSVA-NRTSPMMEGTLTIDSPSLRNALRWTGQPQPGSGGFGRFALKARANVVGASIALT 316 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 ++ + + + L + Sbjct: 317 NVNVEL----DGNAAEGVMTYANNGRQTLQATLAADALDF 352 >gi|168746938|ref|ZP_02771960.1| AsmA family protein [Escherichia coli O157:H7 str. EC4113] gi|168753336|ref|ZP_02778343.1| AsmA family protein [Escherichia coli O157:H7 str. EC4401] gi|168759607|ref|ZP_02784614.1| AsmA family protein [Escherichia coli O157:H7 str. EC4501] gi|168765931|ref|ZP_02790938.1| AsmA family protein [Escherichia coli O157:H7 str. EC4486] gi|168772522|ref|ZP_02797529.1| AsmA family protein [Escherichia coli O157:H7 str. EC4196] gi|168779667|ref|ZP_02804674.1| AsmA family protein [Escherichia coli O157:H7 str. EC4076] gi|168785389|ref|ZP_02810396.1| AsmA family protein [Escherichia coli O157:H7 str. EC869] gi|168797354|ref|ZP_02822361.1| AsmA family protein [Escherichia coli O157:H7 str. EC508] gi|195935052|ref|ZP_03080434.1| hypothetical protein EscherichcoliO157_01110 [Escherichia coli O157:H7 str. EC4024] gi|208806477|ref|ZP_03248814.1| AsmA family protein [Escherichia coli O157:H7 str. EC4206] gi|208811877|ref|ZP_03253206.1| AsmA family protein [Escherichia coli O157:H7 str. EC4045] gi|208818733|ref|ZP_03259053.1| AsmA family protein [Escherichia coli O157:H7 str. EC4042] gi|209398465|ref|YP_002273003.1| AsmA family protein [Escherichia coli O157:H7 str. EC4115] gi|217324670|ref|ZP_03440754.1| AsmA family protein [Escherichia coli O157:H7 str. TW14588] gi|254795477|ref|YP_003080314.1| putative outer membrane biogenesis protein [Escherichia coli O157:H7 str. TW14359] gi|261224839|ref|ZP_05939120.1| hypothetical protein EscherichiacoliO157_09607 [Escherichia coli O157:H7 str. FRIK2000] gi|261254264|ref|ZP_05946797.1| hypothetical protein EscherichiacoliO157EcO_00370 [Escherichia coli O157:H7 str. FRIK966] gi|187771819|gb|EDU35663.1| AsmA family protein [Escherichia coli O157:H7 str. EC4196] gi|188018399|gb|EDU56521.1| AsmA family protein [Escherichia coli O157:H7 str. EC4113] gi|189002291|gb|EDU71277.1| AsmA family protein [Escherichia coli O157:H7 str. EC4076] gi|189359373|gb|EDU77792.1| AsmA family protein [Escherichia coli O157:H7 str. EC4401] gi|189364515|gb|EDU82934.1| AsmA family protein [Escherichia coli O157:H7 str. EC4486] gi|189369517|gb|EDU87933.1| AsmA family protein [Escherichia coli O157:H7 str. EC4501] gi|189374667|gb|EDU93083.1| AsmA family protein [Escherichia coli O157:H7 str. EC869] gi|189379881|gb|EDU98297.1| AsmA family protein [Escherichia coli O157:H7 str. EC508] gi|208726278|gb|EDZ75879.1| AsmA family protein [Escherichia coli O157:H7 str. EC4206] gi|208733154|gb|EDZ81841.1| AsmA family protein [Escherichia coli O157:H7 str. EC4045] gi|208738856|gb|EDZ86538.1| AsmA family protein [Escherichia coli O157:H7 str. EC4042] gi|209159865|gb|ACI37298.1| AsmA family protein [Escherichia coli O157:H7 str. EC4115] gi|217320891|gb|EEC29315.1| AsmA family protein [Escherichia coli O157:H7 str. TW14588] gi|254594877|gb|ACT74238.1| predicted outer membrane biogenesis protein [Escherichia coli O157:H7 str. TW14359] gi|320191429|gb|EFW66079.1| hypothetical protein YhjG [Escherichia coli O157:H7 str. EC1212] gi|320639840|gb|EFX09434.1| hypothetical protein ECO5101_02480 [Escherichia coli O157:H7 str. G5101] gi|320645340|gb|EFX14356.1| hypothetical protein ECO9389_02224 [Escherichia coli O157:H- str. 493-89] gi|320650651|gb|EFX19117.1| hypothetical protein ECO2687_05114 [Escherichia coli O157:H- str. H 2687] gi|320655845|gb|EFX23768.1| hypothetical protein ECO7815_03500 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320666650|gb|EFX33633.1| hypothetical protein ECOSU61_16580 [Escherichia coli O157:H7 str. LSU-61] gi|326337478|gb|EGD61313.1| Uncharacterized protein YhjG [Escherichia coli O157:H7 str. 1044] gi|326340004|gb|EGD63811.1| Uncharacterized protein YhjG [Escherichia coli O157:H7 str. 1125] Length = 686 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|300950861|ref|ZP_07164743.1| AsmA family protein [Escherichia coli MS 116-1] gi|300955007|ref|ZP_07167417.1| AsmA family protein [Escherichia coli MS 175-1] gi|300318049|gb|EFJ67833.1| AsmA family protein [Escherichia coli MS 175-1] gi|300449837|gb|EFK13457.1| AsmA family protein [Escherichia coli MS 116-1] Length = 691 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 52/411 (12%), Positives = 115/411 (27%), Gaps = 38/411 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + + + Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLGK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376 L + + K+K + KK + K + + + + GD Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETDKWDVMDGD 421 >gi|293453829|ref|ZP_06664248.1| yhjG protein [Escherichia coli B088] gi|291321955|gb|EFE61386.1| yhjG protein [Escherichia coli B088] Length = 691 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISVAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|260857628|ref|YP_003231519.1| putative outer membrane biogenesis protein [Escherichia coli O26:H11 str. 11368] gi|260870250|ref|YP_003236652.1| putative outer membrane biogenesis protein [Escherichia coli O111:H- str. 11128] gi|300822081|ref|ZP_07102224.1| AsmA family protein [Escherichia coli MS 119-7] gi|301326672|ref|ZP_07219996.1| AsmA family protein [Escherichia coli MS 78-1] gi|331679601|ref|ZP_08380271.1| AsmA family protein [Escherichia coli H591] gi|257756277|dbj|BAI27779.1| predicted outer membrane biogenesis protein [Escherichia coli O26:H11 str. 11368] gi|257766606|dbj|BAI38101.1| predicted outer membrane biogenesis protein [Escherichia coli O111:H- str. 11128] gi|300525444|gb|EFK46513.1| AsmA family protein [Escherichia coli MS 119-7] gi|300846647|gb|EFK74407.1| AsmA family protein [Escherichia coli MS 78-1] gi|331072773|gb|EGI44098.1| AsmA family protein [Escherichia coli H591] Length = 691 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISVAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|293407141|ref|ZP_06651065.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298382891|ref|ZP_06992486.1| yhjG protein [Escherichia coli FVEC1302] gi|291425952|gb|EFE98986.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298276727|gb|EFI18245.1| yhjG protein [Escherichia coli FVEC1302] Length = 686 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 53/403 (13%), Positives = 116/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVEWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + D + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDTNAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + A K + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLAGKGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSIQPAGKVLPYDRFETD 408 >gi|189425282|ref|YP_001952459.1| hypothetical protein Glov_2223 [Geobacter lovleyi SZ] gi|189421541|gb|ACD95939.1| protein of unknown function DUF748 [Geobacter lovleyi SZ] Length = 1216 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 58/428 (13%), Positives = 132/428 (30%), Gaps = 67/428 (15%) Query: 3 RRVLIGLGFLFS-VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R+++ G +F +VL +P+ I + E+ T +G+ ++ + PF Sbjct: 15 KRLIVWGGSIFLFMVLFSTLVLPVII-----KSQAEKGITRAIGRSARIE---AVRFNPF 66 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 ++ K + + + S + L + L ++ +D+ + ++ Sbjct: 67 GMTLTVKGFSLFEPDARSPFIQFNSLRVSLSSASLFRFAPVADELSLDRLQVKLIRTAAN 126 Query: 121 VSNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQE--SDQVYFLSDLNLQIS 170 N+ Q K + I ++G I D+ + + + +L I Sbjct: 127 RYNFSDIIDRLAAQPKQEKSTTPRFSINNISLQGSSIDFEDRAVNGGKKHTIRELTFTIP 186 Query: 171 -----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 + +I +G ++ + N + + P Sbjct: 187 FISTIPYLAEQYTDPRFSAIINGARFSFSGKTRPLHNSMETNLNLKLAELDLPYYLAYLP 246 Query: 226 LAYPIIIDLFGNLFWN-----------EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS- 273 PI +D G L + + + + G+ + K N A RL Sbjct: 247 AQMPIKLD-SGKLGLDLALTYRIHQNKKPELMIKGLTRLDEISVKEKNNASLASFKRLDV 305 Query: 274 -------------------GNFKISDGNVRISRYKLQSILPNSSTD-EDNKTKVSQDEEN 313 + + Q +LP + K V ++ Sbjct: 306 VSKEVELFSRKVVLQQLALDGLTLQVERDSAGKLNFQRLLPAEPAAPKTGKKTVKKENSP 365 Query: 314 LLNFSE------NGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 L +GA S HD F+ + + ++K ++ + N + + S + Sbjct: 366 PLQLMVENLALTDGAVSFHDRQPAGGFK---SRLQAINVKLSNLSTTANTQSAYEISFNG 422 Query: 368 ENQENFSG 375 ++ E F+ Sbjct: 423 DSAETFAA 430 Score = 63.0 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 34/297 (11%), Positives = 91/297 (30%), Gaps = 31/297 (10%) Query: 41 TLIVGKKIAVKGGIKIHILPFPSV----FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL 96 + +G +A+ I + P + +I + +K + S + + L + ++ + L Sbjct: 255 SGKLGLDLALTYRIHQNKKPELMIKGLTRLDEISVKEKNNAS-LASFKRLDVVSKEVELF 313 Query: 97 SGEIRVFDMYIDQPHLNFYLSSKGVSNWF---------------QRKSTMDMIHNVILEK 141 S ++ + + +D L S G N+ K +++E Sbjct: 314 SRKVVLQQLALDGLTLQVERDSAGKLNFQRLLPAEPAAPKTGKKTVKKENSPPLQLMVEN 373 Query: 142 IHVKGGRIKIID--QESDQVYFLSDLNLQISARFLNIISPLSID-----SIKGSVIAEGT 194 + + G + D L +N+++S + + + + A GT Sbjct: 374 LALTDGAVSFHDRQPAGGFKSRLQAINVKLSNLSTTANTQSAYEISFNGDSAETFAASGT 433 Query: 195 GNFDNKRSAFKITANFPAKNKAISL--KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS 252 + + + + + + P+ + + + + Sbjct: 434 ASLSPISATSRFNLSGIKLQRGWPYLQNLLTAPVNGNLSLAGKATFSAQDGVAVQDLAVH 493 Query: 253 VAGDFSKLLNLELS-AKKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + +K + + + L+G +F + + KL S + D Sbjct: 494 LQDIAAKYGDKDSTRLTSLDLTGISFSQKENQAAVDEIKLAGGNIKLSREADGSISA 550 >gi|293412955|ref|ZP_06655623.1| yhjG protein [Escherichia coli B354] gi|291468602|gb|EFF11095.1| yhjG protein [Escherichia coli B354] Length = 686 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 112/403 (27%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHADDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|323189330|gb|EFZ74613.1| asmA family protein [Escherichia coli RN587/1] Length = 686 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 42/358 (11%), Positives = 98/358 (27%), Gaps = 35/358 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P + +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHIHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWAFNLASDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGIVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 G KI + Y+ + S + + L + Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRL 363 >gi|194290380|ref|YP_002006287.1| outer membrane biogenesis protein, asma family [Cupriavidus taiwanensis LMG 19424] gi|193224215|emb|CAQ70224.1| putative outer membrane biogenesis protein, AsmA family [Cupriavidus taiwanensis LMG 19424] Length = 776 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 53/415 (12%), Positives = 112/415 (26%), Gaps = 65/415 (15%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI---- 58 R+V++ ++ V L DW + + + +G+ A+ G + + Sbjct: 5 RKVVLWSVLTPVALIALLVVVILTFDWNRIKPWLNDRVSEAIGRPFAINGDLTVTWRRGE 64 Query: 59 --------LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P+P + +DI + + + + L LPLL+ EI V + ID Sbjct: 65 GEKGWRTLVPWPRLSARDITVGNPDWAAQPNMATVRELIFVLRPLPLLANEIAVPTIVID 124 Query: 109 QPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-----QVYF 161 P + + +NW + + ++ + G + + DQ ++ Sbjct: 125 SPAVWLERLADSRNNWTFDTGPKEGTSKWQLDVGEVVLARGNLALTDQLKKISLQAELDT 184 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS------------------------------VIA 191 + + L AR ++ P + G V Sbjct: 185 IGNAPLYDKARDGALVEPQASAVPPGPPGSAAQAASAPRAGGPASAAPANGGDGRYGVRW 244 Query: 192 EGTGNFDNKRSAFKITANF--PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 + TG ++ A +N + IQ + G + Sbjct: 245 KATGRYNEATINASGKAGTVLSLRNTDVPFPIQADVRVGTTRAQIEGTVTNPAHLAALDV 304 Query: 250 VFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTD 300 ++AGD L RL + ++ + + S Sbjct: 305 HLTLAGDSMARLYALTGVVLPSTPPYQTRGRLMATLRKEGSIYEYQKFTGRVGGSDLSGT 364 Query: 301 EDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV 355 +D LL + + + + D Sbjct: 365 LT---FTKRDPRPLLAGNLVSNQLRFVDLAPLIGADAKPGRPAKDSPVAQPADKA 416 >gi|320661627|gb|EFX29042.1| hypothetical protein ECO5905_02492 [Escherichia coli O55:H7 str. USDA 5905] Length = 686 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 114/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L + Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELMGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|183598280|ref|ZP_02959773.1| hypothetical protein PROSTU_01666 [Providencia stuartii ATCC 25827] gi|188020451|gb|EDU58491.1| hypothetical protein PROSTU_01666 [Providencia stuartii ATCC 25827] Length = 615 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 51/374 (13%), Positives = 104/374 (27%), Gaps = 57/374 (15%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81 + + ++ DFR+ Q G ++ KG ++ H+ P S+ + + Sbjct: 21 ALVMLVNPNDFRQYLVEQVEKKSGYQLDFKGDMRWHVWPTLSIITGPVSVTAPNASQPVL 80 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS----------NWFQRKSTM 131 E + + E PLLS + V + +D + S+ + N ST Sbjct: 81 SAENMRLDVELWPLLSHRLSVEQIVLDGAVIRHTPESEAQTDANSPIAPAGNKQTPSSTE 140 Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA 191 + +EK+ V + Q + Y L ++NL + K + Sbjct: 141 KSQWLLDIEKVEVSNSLVIWKTQ--NDEYNLRNINLSLKKNDER----------KITAKF 188 Query: 192 EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 G N + + F A + + QL + Sbjct: 189 SGNLNKNQQELRFDARAELDLSQLSHQISGQL-----------------------TQFDY 225 Query: 252 SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE 311 + G + + + +F NV + ++ + ++ K Sbjct: 226 TFTGVDLPEGGITG-----QFTSDFAYIKENVATASLN-NIVIKANESELTGKIAAQLGN 279 Query: 312 ENLLNFSENGAESMHDL------NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSH 365 + + D E N K I +K + N Sbjct: 280 IPDVRVQLSSHRLNLDKLLGTPHTNAGSHNANESDNPARVGVKPVISGKETQKYDLSNLK 339 Query: 366 DKENQENFSGDKMI 379 + + D +I Sbjct: 340 SFTANIDLNIDNLI 353 >gi|323166996|gb|EFZ52735.1| asmA family protein [Shigella sonnei 53G] Length = 686 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 49/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD + Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDIYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|331670355|ref|ZP_08371194.1| AsmA family protein [Escherichia coli TA271] gi|320198351|gb|EFW72954.1| hypothetical protein YhjG [Escherichia coli EC4100B] gi|323944505|gb|EGB40577.1| AsmA family protein [Escherichia coli H120] gi|331062417|gb|EGI34337.1| AsmA family protein [Escherichia coli TA271] Length = 686 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISVAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|325273647|ref|ZP_08139862.1| AsmA family protein [Pseudomonas sp. TJI-51] gi|324101215|gb|EGB98846.1| AsmA family protein [Pseudomonas sp. TJI-51] Length = 688 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 44/339 (12%), Positives = 95/339 (28%), Gaps = 38/339 (11%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRI 71 DW + + + + + A+ G + +H +P+P +D+ + Sbjct: 26 IATFDWNRVKPLLNEKVSEALHRPFAINGNLAVHWRTEPEEGGWRAWVPWPHFTAEDLTL 85 Query: 72 DQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--- 126 E +E + R LPLL +I + + + +P + + G +NW Sbjct: 86 GNPEWLQEPKMVGLERVEFRLAPLPLLVQKISIPRINLTKPTASLTRLADGRANWTFDFG 145 Query: 127 --RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 ++ + + I G + DQ + L F I+ S + Sbjct: 146 PKDENEAPSKWQLDIGAIGFDQGNVSFDDQTLKTRMKVQVAPLGKPIPFSEIVGKASAEK 205 Query: 185 IKG----SVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 G + + G + + + ++ +Q + L G L Sbjct: 206 AGGAQDYAFAFKAQGRYKGQPVSGTGKIGGLLALQDATQPFPLQADVRIADTHVVLAGTL 265 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDG-NVRISRY 288 ++G L RLS N ++G + + Sbjct: 266 TDPRNLGALDLRLRLSGASLGNLYPLTGVTLPDTPAYSTDGRLSANLHAAEGARFKYEGF 325 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + D V+ L + + Sbjct: 326 NGKIGDSDIHGDL---AFVASQPRPKLTGKLVSNQLLFK 361 >gi|323179527|gb|EFZ65094.1| asmA family protein [Escherichia coli 1180] Length = 686 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISVAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|301025858|ref|ZP_07189346.1| AsmA family protein [Escherichia coli MS 69-1] gi|300395787|gb|EFJ79325.1| AsmA family protein [Escherichia coli MS 69-1] Length = 691 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 52/403 (12%), Positives = 115/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + A K + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGEADKEKVGDYVFGLKAQGRYNGEPLAGKGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTAGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|325499078|gb|EGC96937.1| outer membrane biogenesis protein [Escherichia fergusonii ECD227] Length = 686 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 44/377 (11%), Positives = 103/377 (27%), Gaps = 35/377 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITASIVGAFLLLIVVAIVLIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVIWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P + +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHIHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWVKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNFANDDNKDANAKPSAWSFRLDNILFDQGRIDIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + + G ++ + K + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGNADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328 G KI + Y+ + S + + L + Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 329 NETDFFEEEEKKNKNDD 345 + K + Sbjct: 366 LGPLIGVDSGKGAEKSK 382 >gi|238787710|ref|ZP_04631507.1| hypothetical protein yfred0001_24960 [Yersinia frederiksenii ATCC 33641] gi|238724053|gb|EEQ15696.1| hypothetical protein yfred0001_24960 [Yersinia frederiksenii ATCC 33641] Length = 705 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 45/411 (10%), Positives = 115/411 (27%), Gaps = 68/411 (16%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 +VL +G + +++ A + DW + + + + + A++G + + Sbjct: 6 KVLTVVGGIIMLLVAAAIVFVMTFDWNRLKPTINEKVSAELQRPFAIRGNLGVDWSRKGD 65 Query: 58 ------ILPFPSVFFKDIRIDQKED--------------------GSFESKIEGLSMRAE 91 +P+P++ +D+ + D ++ + Sbjct: 66 EPGWRGWIPWPNIHAEDLVLGNPPDLVSDKAAKTSEDKAESTEFPTGEMVTLKRVDASIA 125 Query: 92 FLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHV 144 L LL E+ + +++ QP+ + G +NW + +V + I Sbjct: 126 PLALLGKEVLIPRIWLTQPNATLQRLANGKNNWTFNLANSSTDSESPPSSWSVDIHDIVF 185 Query: 145 KGGRIKIIDQ-----------ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193 G I + D + +++ + + + ++ + Sbjct: 186 DSGEINLNDAILKADLHAVIDPLGKPLPFAEVIGGHNEKKDKSAADKVSNTPDYVFGWKI 245 Query: 194 TGNFDNKRSAFKITANFPA--KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 G + + N + +Q + + + G L Sbjct: 246 DGKYQGQPLTGSGKIGGMLSMSNATMPFPLQADVRSGTTRVAVVGTLTDPGNLAGLDLEL 305 Query: 252 SVAGDFSKLLNLELSAKKSR---------LSGNFKISDGNV-RISRYKLQSILPNSSTDE 301 +G L + L + K + G V R + + + + Sbjct: 306 KFSGASLDNLYPLIGVLLPATPPYNTDGHLIASLKQAGGAVYRYENFNGKIGDSDIHGNL 365 Query: 302 DNKTK------VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346 V + N L F++ D N+ E + + + Sbjct: 366 TYTASEPRPKLVGKLSSNTLRFADLAPLIGADSNQEKANRGERSRQPANKV 416 >gi|323154030|gb|EFZ40236.1| asmA family protein [Escherichia coli EPECa14] Length = 686 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISVAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|320183468|gb|EFW58317.1| hypothetical protein YhjG [Shigella flexneri CDC 796-83] Length = 686 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 114/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ ++ + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEQLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|58038719|ref|YP_190683.1| hypothetical protein GOX0244 [Gluconobacter oxydans 621H] gi|58001133|gb|AAW60027.1| Hypothetical membrane-spanning protein [Gluconobacter oxydans 621H] Length = 718 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 105/350 (30%), Gaps = 38/350 (10%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64 +L +G + ++ + L W F +R+ T + + +++ + + + +V Sbjct: 25 ILKTVGGVLGTLVAAIVILILVWQWDWFVPYIDRKGTAALHRPVSIA-HLHVGLGFKTTV 83 Query: 65 FFKDIRIDQKEDG----SFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSK 119 D++I Q E + + +++ + L+ G + + + D P + Sbjct: 84 TVDDLKIGQPEGFEKEKDDFASAKAITVTVDVWRYLTGGGLSLPLIRADTPKGDIVSLLN 143 Query: 120 GVSNWFQRKSTMDMIHN--------VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 G +N+ S+ L KI + G I++ + + Sbjct: 144 GTNNYSFASSSDPSSQTSSSSTTTLPKLGKIEINDGDIRLALAKLKTDMHV--------- 194 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP--AKNKAISLKIQLFPLAYP 229 I + + G ++ + G + I + I P Sbjct: 195 ---LIHTEEPKNGDDGHLVIDLKGRYAQAPITGHIVGGALLGLTDATHPYPIDGRLANGP 251 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVR 284 + L G + + AG LL + ++GN SD +R Sbjct: 252 TYVTLRGTVDDPIHFQGTNLALHFAGPDMALLYPLTGVPIPQTPAYSVTGNLAYSDRAIR 311 Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334 +++ + V ++ + DL + F Sbjct: 312 FQKFEGHMGSSD----IGGDINVDPHQKPIF-VEAALHSHSVDLADLGGF 356 >gi|324111851|gb|EGC05831.1| AsmA family protein [Escherichia fergusonii B253] Length = 686 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 44/377 (11%), Positives = 103/377 (27%), Gaps = 35/377 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITASIVGAFLLLIVVAIVLIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVIWERPKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P + +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHIHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWVKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKSSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + + G ++ + K + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGNADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328 G KI + Y+ + S + + L + Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 329 NETDFFEEEEKKNKNDD 345 + K + Sbjct: 366 LGPLIGVDSGKGAEKSK 382 >gi|331649345|ref|ZP_08350431.1| AsmA family protein [Escherichia coli M605] gi|331041843|gb|EGI13987.1| AsmA family protein [Escherichia coli M605] Length = 691 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 112/403 (27%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVPAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANGDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLSFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|188491975|ref|ZP_02999245.1| AsmA family protein [Escherichia coli 53638] gi|188487174|gb|EDU62277.1| AsmA family protein [Escherichia coli 53638] Length = 686 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEAPLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIVIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|15804068|ref|NP_290104.1| hypothetical protein Z4937 [Escherichia coli O157:H7 EDL933] gi|12518239|gb|AAG58665.1|AE005578_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] Length = 691 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFXGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|146338317|ref|YP_001203365.1| outer membrane protein assembly protein AsmA [Bradyrhizobium sp. ORS278] gi|146191123|emb|CAL75128.1| possible asmA protein, assembly of outer membrane proteins [Bradyrhizobium sp. ORS278] Length = 653 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 115/339 (33%), Gaps = 23/339 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+ + L + VG T ++ R E Q + G ++ VKG I + + P Sbjct: 9 MRRLGTPIAVLLGIAFVGLLTSSWLVNRDALRRAVETQIRAVTGLELVVKGPIDVSLFPG 68 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 V F D+ +++ L+ + LPLL + D+ + +P +N + G Sbjct: 69 SYVSFHDVGFKGSTADDPALRVDVLTANLQLLPLLLQRFEIADVMMLRPQINVTREANGN 128 Query: 122 SNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 SNW R + +I ++ G + D L D++L Sbjct: 129 SNWTPFIDTITRTMRPGSDSQMSFSEIRIQDGVLTYDDNGHHASERLDDIDL-------- 180 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPIIIDL 234 L+ SI S A G ++ +R ++ + + +++ + P+ + Sbjct: 181 ---SLAWPSISRSFAATGQFDWRGQRIEGSVSISDFLAALSGDRSGLKMRLASPPLKVAF 237 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 G + N + G +V + L + + SG F R + L Sbjct: 238 DGTVA-NRTSALMEGTLTVDSPSLRD-ALRWTGQTPLGSGGFGRFALRARANVVGASVAL 295 Query: 295 PNSSTDEDNKTK---VSQDEENLLNFSENGAESMHDLNE 330 N + + D ++ + A D Sbjct: 296 TNVNVELDGNAAEGVMTYANNGRQSLQATLAADALDFTP 334 >gi|146284408|ref|YP_001174561.1| hypothetical protein PST_4096 [Pseudomonas stutzeri A1501] gi|145572613|gb|ABP81719.1| conserved hypothetical protein [Pseudomonas stutzeri A1501] Length = 740 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 56/414 (13%), Positives = 122/414 (29%), Gaps = 74/414 (17%) Query: 18 VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-D 76 F + D D++++ A G ++ +KG I + P+ + D + + Sbjct: 21 AAGFALTHLFDPNDYKDEIRDLARNNAGLELDIKGDIGWSLFPWLGLELHDTTLASAQTP 80 Query: 77 GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF----------- 125 G + + L + +PLLS E+++ D+ ++ +L +G NW Sbjct: 81 GQPFADLRMLGLSVRVMPLLSREVQMSDITVNGLNLTLSRDEQGRGNWEGVGQPAGRREQ 140 Query: 126 ---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + S + ++ + V R+ D ++ Q Y + L Sbjct: 141 AGEPPKAAEPQTEQREEASPARKPLTLDIDSLTVSDARVTYSDAKTGQQYSAESIELTTG 200 Query: 171 ARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAFKI---TANFPAKNKAISL 219 A P+ +++ GS +G FDN+ ++ + A + + Sbjct: 201 AIREGSSIPVKLNAFFGSNQPVMRARTELQGALRFDNQLKRYQFEDMRLSGEASGEPLQG 260 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 + F +++DL + + L K+ ++SG ++ Sbjct: 261 QTLTFSAQGQLLVDLAAQIAEWNSLKFTANQLR----GLGELKARDLDKEPKISGAMTVA 316 Query: 280 DGNVR------------------------ISRYKLQSILPN--------SSTDEDNKTKV 307 N+R +SR + + + + Sbjct: 317 QFNLREFLQGTGQQLPAMADGNALNRAELVSRLSGTANSLALEELTLKLDDSTFTGRIAI 376 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361 S L G D ++E K+ +V Sbjct: 377 SDFARQALRVDLKGDRLNLDRYLPPPSKDEPAGAARKSEVKNTQAAAVGSGSTP 430 >gi|89092427|ref|ZP_01165381.1| AsmA family superfamily protein [Oceanospirillum sp. MED92] gi|89083515|gb|EAR62733.1| AsmA family superfamily protein [Oceanospirillum sp. MED92] Length = 711 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 64/405 (15%), Positives = 128/405 (31%), Gaps = 49/405 (12%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +L+ VL + F+ +++ G + D +++ + E+ A G ++ + G I + P Sbjct: 4 LLKVVLGLVAFIVVLIVAGGAILSTVFDPNEYKPEIEKAALENSGVELKINGDIGWSVFP 63 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I + + + + LLSG++ + + +D LN + G Sbjct: 64 WLGLEVNKIDVQYP-GKQQLASLNQAQVSVRLPALLSGQVEMQSVVVDGLKLNLVKEADG 122 Query: 121 VSNWF--------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 SNW + + ++ I + G I +D+ ++ Sbjct: 123 SSNWAADVSTKQVEKSSEDQGSSTQASAAESGAAIALNIDSIQITNGLINYLDKTTETEA 182 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 LSD N+ N P + +G + ++ +A F K Sbjct: 183 TLSDFNMTSGQVVTNAFFPAELSFNAVQ-KVKGE---EQIKAGANFSAEFFLDLTNQLYK 238 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280 I+ + G +A L NL LS + +G +++ Sbjct: 239 IKGLNSELALSGKPLGGKSLTISTAA-DIEADLAKQALSLNNLNLSLANLKATGALAVNN 297 Query: 281 -------GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 G + + + L +L + E T S + + G Sbjct: 298 FASPEISGKLSVPAFDLNKLLVSVGQAEVKTTDASVLKAISFDTELAGPA---------- 347 Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378 K LK DD ++ N + N GDK+ Sbjct: 348 ---NTVTAKTLSLKLDDTSFNGNAAYDLK---SGNITLNLQGDKL 386 >gi|85716108|ref|ZP_01047084.1| Uncharacterized protein involved in outer membrane biogenesis [Nitrobacter sp. Nb-311A] gi|85697107|gb|EAQ34989.1| Uncharacterized protein involved in outer membrane biogenesis [Nitrobacter sp. Nb-311A] Length = 643 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 110/342 (32%), Gaps = 26/342 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVP---LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58 ++R+ I + + V ++G + +D R+ E Q + G G I + + Sbjct: 1 MKRLGISVAAILGVAVIGLTALISMSRLLDHDALRDAVESQIRTVTGLDFIANGRIDVSV 60 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 P V F D+RI + + +E L+ LPLL ++ D+ + P++ ++ Sbjct: 61 FPASYVSFHDVRIKGSDADAPALSVEVLTANLRLLPLLMQHFQIADVMLLHPYIRVKRAA 120 Query: 119 KGVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 G SNW R V +I ++ G + D + L ++L Sbjct: 121 DGRSNWTPFVETIARNMKPGADSPVSFSEIQIQNGELSYEDAAGEISENLGGIDL----- 175 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPII 231 L+ SI S A G ++ +R I + + +++ + + Sbjct: 176 ------SLAWPSISRSFAATGQFDWRGERVDGSIGLSDFLAALSGERSGLKIKVTSPRLK 229 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 G + + G S + + SG F R S Sbjct: 230 FAFEGTVANPISL-MMEGTLSADSASLREALRWIGRPPPGSSG-FDRFALKARASLIGSS 287 Query: 292 SILPNSSTDEDN---KTKVSQDEENLLNFSENGAESMHDLNE 330 L N + + D + ++ A D Sbjct: 288 LALTNVNLEIDGNVAEGVMTYANNGRQTLQATLAAGTLDFTP 329 >gi|213967960|ref|ZP_03396106.1| AsmA family protein [Pseudomonas syringae pv. tomato T1] gi|213927303|gb|EEB60852.1| AsmA family protein [Pseudomonas syringae pv. tomato T1] Length = 748 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 43/381 (11%), Positives = 100/381 (26%), Gaps = 45/381 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G +VL V + DW + + + + + A+ G + + Sbjct: 65 RKIFAWTGTTLLLVLAVLVIVIVTFDWNRIKPTLNEKVSEALQRPFAINGDLDVRWTREP 124 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + + ++ + R LPLL ++ + + + Sbjct: 125 ELGGWRAWVPSPHFVADDLTLGNPDWSKTPQMVNLKHVEFRLSLLPLLVQQVVIPRIDLT 184 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + + + I G + DQ + + Sbjct: 185 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVIDIGAIKFDKGLVSFNDQTLNANLDVV 244 Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212 +++ + I + G + ++ + Sbjct: 245 -IDMLGKPIPFSEIVGSKEAQKAQEKGSVPQDYAFGLAVKGQYHGQKLSGTGKIGGLLAL 303 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270 K+ + +Q + G L + ++G L Sbjct: 304 KDASQPFPVQADVKIGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 363 Query: 271 -------RLSGNF-KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321 RL + N R + + + D V+ L+ + Sbjct: 364 PAYSTDGRLVAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSN 420 Query: 322 AESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 421 QLLFSDLAPLIGADSNAAQKK 441 >gi|330960051|gb|EGH60311.1| AsmA family protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 688 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 43/380 (11%), Positives = 99/380 (26%), Gaps = 43/380 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G V+L V + DW + + + + + A+ G + + Sbjct: 5 RKIFAWTGITLVVLLALLVIVIVTFDWNRIKPTLNTKVSEALHRPFAINGDVDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + E ++ + R LPLL ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLALGNPEWSKTPQMVTLKHVEFRLSLLPLLVQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + + + I G + DQ + + Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVIDIGAIKFDKGLVSFNDQTLNANLDVV 184 Query: 164 --------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAK 213 + + ++ + TG + ++ + K Sbjct: 185 IDMLGKPIPFSEIVGSKEAKKAQDKGAVPQDYAFGLAVTGQYHGQKLSGTGKIGGLLALK 244 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + +Q + G L + ++G L Sbjct: 245 DANQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVALPDSP 304 Query: 271 ------RLSGNF-KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENGA 322 RL + + R + + + D V+ L+ + Sbjct: 305 AYSTDGRLVAKLHDAAGASFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSNQ 361 Query: 323 ESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 362 LLFSDLAPLIGADSNAAQKK 381 >gi|300922348|ref|ZP_07138470.1| AsmA family protein [Escherichia coli MS 182-1] gi|300421288|gb|EFK04599.1| AsmA family protein [Escherichia coli MS 182-1] Length = 691 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISVAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGCYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|320173083|gb|EFW48302.1| hypothetical protein YhjG [Shigella dysenteriae CDC 74-1112] Length = 686 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLIKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ ++ + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEQLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|299132035|ref|ZP_07025230.1| AsmA family protein [Afipia sp. 1NLS2] gi|298592172|gb|EFI52372.1| AsmA family protein [Afipia sp. 1NLS2] Length = 659 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 93/279 (33%), Gaps = 17/279 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+ + + + VL G FID R+ E Q G ++ V G + + P Sbjct: 6 IRRLALSVAIVLGAVLAGLLASSWFIDRNAVRQAVETQIRDATGLELVVTGKTDVSLFPS 65 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 V + + D + L R L++G RV D+ + P + + G Sbjct: 66 ARVVLHGVALKGNADHDAPLSTDQLQARLSLFGLIAGHTRVTDVALHAPRIRVTVDKDGH 125 Query: 122 SNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 SNW R +V + + G + + ++ + ++L IS + Sbjct: 126 SNWAPIVQTFARAVKPAATRDVWFSDVKISDGTLAYRNAKNQANETVGGIDLTISLPSGS 185 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 L + + +G+ A+F A +++ P+ + Sbjct: 186 RSFSLQGQATWHNEQLDGSFTI----------ADFIAAVGGEKSGLKVKLSGTPLKLSFD 235 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274 G + N + G + + + L + +G Sbjct: 236 GTMT-NRSSLLLDGTLTASTASLRGLTRWAGHELPGSNG 273 >gi|110643771|ref|YP_671501.1| AsmA family protein [Escherichia coli 536] gi|110345363|gb|ABG71600.1| AsmA family protein [Escherichia coli 536] Length = 691 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTLFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|170723810|ref|YP_001751498.1| AsmA family protein [Pseudomonas putida W619] gi|169761813|gb|ACA75129.1| AsmA family protein [Pseudomonas putida W619] Length = 688 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 90/311 (28%), Gaps = 35/311 (11%) Query: 21 FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKD 68 V DW + + + + + A+ G + +H +P+P +D Sbjct: 23 VVVIATFDWNRVKPLLNEKVSEALHRPFAINGNLAVHWRTEPEEGGWRAWVPWPHFIAED 82 Query: 69 IRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126 + + E +E + R LPL+ +I + + + +P + + G +NW Sbjct: 83 LTLGNPEWLKEPKMVGLERVEFRLAPLPLVFQQIVIPRIDLVKPTASLTRLADGRANWTF 142 Query: 127 -----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 ++ + + I G + DQ + L F +I+ S Sbjct: 143 DFGPKDENAQPSKWQLDIGAIGFDQGNVSFDDQTLKTSMKVQIDPLGKPIPFSDIVGKAS 202 Query: 182 IDSIKG----SVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLF 235 + G + + G + + + ++ + +Q + L Sbjct: 203 AEKAGGAQDYAFGLKAQGRYKGQPVSGTGKIGGLLALQDASQPFPLQADVRIADTHVVLA 262 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDG-NVRI 285 G L ++G L L+ N ++G Sbjct: 263 GTLTDPRNLGALDLRLRLSGASLGNLYPLTGVTLPDTPAYETDGHLTANLHAAEGATFNY 322 Query: 286 SRYKLQSILPN 296 + + + Sbjct: 323 QGFNGKIGDSD 333 >gi|300976743|ref|ZP_07173562.1| AsmA family protein [Escherichia coli MS 200-1] gi|300308480|gb|EFJ63000.1| AsmA family protein [Escherichia coli MS 200-1] gi|324014184|gb|EGB83403.1| AsmA family protein [Escherichia coli MS 60-1] Length = 691 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 251 GTLFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESLQLRLAD 370 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413 >gi|110807380|ref|YP_690900.1| hypothetical protein SFV_3564 [Shigella flexneri 5 str. 8401] gi|110616928|gb|ABF05595.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] Length = 686 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 114/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGNLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L F + + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYIFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEQSVQPAGKVLPYDRFETD 408 >gi|30065194|ref|NP_839365.1| hypothetical protein S4211 [Shigella flexneri 2a str. 2457T] gi|56480363|ref|NP_709302.2| hypothetical protein SF3556 [Shigella flexneri 2a str. 301] gi|30043456|gb|AAP19176.1| hypothetical protein S4211 [Shigella flexneri 2a str. 2457T] gi|56383914|gb|AAN45009.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|313647626|gb|EFS12076.1| asmA family protein [Shigella flexneri 2a str. 2457T] gi|332750048|gb|EGJ80460.1| asmA family protein [Shigella flexneri K-671] gi|332751126|gb|EGJ81529.1| asmA family protein [Shigella flexneri 2747-71] gi|332763473|gb|EGJ93712.1| asmA family protein [Shigella flexneri 2930-71] gi|332997555|gb|EGK17171.1| asmA family protein [Shigella flexneri K-218] gi|333012431|gb|EGK31812.1| asmA family protein [Shigella flexneri K-304] Length = 686 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 114/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGNLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L F + + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYIFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|77165728|ref|YP_344253.1| hypothetical protein Noc_2265 [Nitrosococcus oceani ATCC 19707] gi|254433717|ref|ZP_05047225.1| AsmA family [Nitrosococcus oceani AFC27] gi|76884042|gb|ABA58723.1| conserved hypothetical protein, AsmA [Nitrosococcus oceani ATCC 19707] gi|207090050|gb|EDZ67321.1| AsmA family [Nitrosococcus oceani AFC27] Length = 812 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 123/342 (35%), Gaps = 32/342 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTV----PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 +++ L L V+++ P ID DF+ Q G+++ + G IK+ Sbjct: 13 MKKFLKILFSTLLVIILLIVIAAVVLPFVIDPNDFKPQITAQVEKATGRELTLGGDIKLS 72 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + P+ V K++ + + +K+ + +R + +PLL + + + ++ LN Sbjct: 73 VFPWLGVDVKEVSLSNAPGFGKTPFAKVSDMEVRVKLMPLLEKHLVMDTVVLNGLDLNLA 132 Query: 116 LSSKGVSNWFQRK-----------------STMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 +++G +NW + + + + + ++ RI D+ D Sbjct: 133 RNAQGKTNWADLAAGESQQTPSQEETATEGESPPPLAGIAIAGLKIEAARIDWRDEVKDV 192 Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANF-PAKNKA 216 Y + LNL + + +D + + G+ D + + AN +N Sbjct: 193 RYTIKKLNLDTDPLVPGEPTQIKLDFDFVASQPDVHGHLDFGGKVTADMEANHYLLQNTD 252 Query: 217 ISLKIQ-----LFPLAYPIIIDLFGNLFWNE-KQPIYSGVFSVAGDFSKLLNLELSAKKS 270 + L + LA + D+ L + V G+ L L S + + Sbjct: 253 LQLTAAGPALPIEQLALQLNADIDAFLAKQQLTVSDLKLTSQVKGEQEVQLTLNTSLEGN 312 Query: 271 RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312 + + ++D + Q P ++T + + E Sbjct: 313 LAAQQYHLNDLQLETQVETPQFPEPINATLAT-TASLDLNGE 353 >gi|238757386|ref|ZP_04618572.1| hypothetical protein yaldo0001_33060 [Yersinia aldovae ATCC 35236] gi|238704425|gb|EEP96956.1| hypothetical protein yaldo0001_33060 [Yersinia aldovae ATCC 35236] Length = 710 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 48/417 (11%), Positives = 112/417 (26%), Gaps = 75/417 (17%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 +VL G+G ++LV A + DW + + + + + A++G + + Sbjct: 6 KVLAGVGGFIVLLLVAAVIFVMTFDWNRLKPTINEKVSAELQRPFAIRGNLGVDWTRKGD 65 Query: 57 -----HILPFPSVFFKDIRIDQKE-----------------------DGSFESKIEGLSM 88 +P+P + +++ + ++ + Sbjct: 66 EPGWRRWVPWPQIHAENLVLGNPTNLVSDTKPNSDKSAKEISESAAFPAGEMVTLQRVDA 125 Query: 89 RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILE 140 L LL E+ + +++ QP+ + G +NW +++ +V + Sbjct: 126 SIALLALLGREVYIPRIWLTQPNAKLLRLANGKNNWTFNLANHPLEGENSSPSSWSVNIN 185 Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS------------ 188 I G I + D ++ ++ D+ KG Sbjct: 186 DIVFDRGEINLQDAILKADLHAV-IDPLGKPLPFAEVTGNRSDAKKGKTANLVENPMPDY 244 Query: 189 -VIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 + G + + + I IQ + + + G L Sbjct: 245 VFGWKVDGKYQGQPLTGSGKIGGMLSMNDADIPFPIQADVRSGSTRVAIAGTLSDPSNLA 304 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQSILP 295 + +G L + RL K + G V + + Sbjct: 305 GLDLQLTFSGASLDNLYPLIGVLLPATPPYNTDGRLIARLKQAGGAVYHYENFNGKIGDS 364 Query: 296 NSSTDEDNKTK------VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346 + + L F++ D N+ E + + + Sbjct: 365 DIHGSLTYTASQPRPTLTGKMLSEKLRFADLAPLIGADSNQEKANRGERNRQPGNKV 421 >gi|123444234|ref|YP_001008202.1| hypothetical protein YE4062 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122091195|emb|CAL14078.1| putative exported protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 706 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 47/425 (11%), Positives = 112/425 (26%), Gaps = 66/425 (15%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 +VL G+ + ++L+ A DW + + + + + A++G + + Sbjct: 6 KVLTGIVGVILLLLIAAIVFIKTFDWNRLKPTINEKVSTELQRPFAIRGNLGVDWSRKGD 65 Query: 58 ------ILPFPSVFFKDIRIDQKED-----------------------GSFESKIEGLSM 88 +P+P + +D+ + D ++ + Sbjct: 66 EPGWRGWVPWPHIHAEDLVLGNPPDLAGGNTAGKSNNAESTTESTAFPTGEMVTLKRVDA 125 Query: 89 RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR 148 L LL+ E+ + +++ QP + G +NW + + V Sbjct: 126 SIAPLALLAKEVWIPRIWLTQPDATLLRLADGKNNWTFNLANSPAGDKSSVSDWSVNIDD 185 Query: 149 IKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS----------------VIAE 192 I + + + +LQ L P + + + + Sbjct: 186 IVFDRGQINLKDAVLKADLQAVIDPLGKPLPFAEVTGTRNEKKATEKAQNKAPDFVFGWK 245 Query: 193 GTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250 G + + + +I +Q + + + G L Sbjct: 246 IDGKYQGQPLTGSGKIGGMLSMNDASIPFPLQADVRSGSTRVAVAGTLTDPANLAGLDLQ 305 Query: 251 FSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQSILPNSSTD 300 +G L + RL + K + G V R + + + D Sbjct: 306 LKFSGASLDNLYPLIGVLLPATPPFNTDGRLIASLKQAGGAVYRYENFNGKIGDSDIHGD 365 Query: 301 EDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEE 360 L + + + + ++ N + V E+ Sbjct: 366 LTYTAS---QPRPKLVGNMSSDKLRFADLAPLIGADSNQEKANRGERSRQPSNKVLPTEK 422 Query: 361 KDNSH 365 D Sbjct: 423 FDTKS 427 >gi|191170491|ref|ZP_03032044.1| AsmA family protein [Escherichia coli F11] gi|190909299|gb|EDV68885.1| AsmA family protein [Escherichia coli F11] Length = 686 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTLFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESLQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|317402391|gb|EFV82963.1| exported protein [Achromobacter xylosoxidans C54] Length = 690 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 46/387 (11%), Positives = 99/387 (25%), Gaps = 40/387 (10%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW R + + +G+ A+ G + + +P+P V DI + Sbjct: 28 TFDWNRARPMINERVSAAIGRPFAINGDLSVEWSRESDEGGWRAWVPWPRVVANDISVAN 87 Query: 74 KEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW--FQRKS 129 E G + ++ LPLLS + + + + +P + + G +NW +S Sbjct: 88 TEWGKAPQFATLKRGEFSLSPLPLLSQRVVIRRIQLTEPAADLERLADGRANWVFTLPES 147 Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDL-NLQISARFLNIISPLSIDSIK 186 + + +I GR+ + D ++D + L A + Sbjct: 148 GEPSPWVLDINEIGFDKGRVGLSDAILQADLTVVVDPLGKPVPFADVAGASFVPEDAAAT 207 Query: 187 GS----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 + G + + + ++ +Q + G L Sbjct: 208 APRDYVFGWKAEGKYKGLATKGEGKVGGMLALQDPRQPFPVQADVTIGGTKAAVAGTLTD 267 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKL 290 ++G L L + + G V + Sbjct: 268 PVNLGALDLRLKLSGGAMAQLYPLTGVTLPDTPPYSTDGHLVAKLRNAGGAVFDYRDFNG 327 Query: 291 QSILPNSSTDEDNKTKVSQ-DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349 + + + L + + K+ D KD Sbjct: 328 RVGGSD----LHGDVSFALSAPRPKLTGKLTSRQLRMEDLGPLIGVPSGKQAPAQDKPKD 383 Query: 350 DIQYSVNKKEEKDNSHDKENQENFSGD 376 K + + + D Sbjct: 384 APAKRAGGKVLPTQAFRTDRWRDMDAD 410 >gi|117621162|ref|YP_855310.1| AsmA protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562569|gb|ABK39517.1| AsmA protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 719 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 47/384 (12%), Positives = 111/384 (28%), Gaps = 60/384 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++++ L L +V + ID F+ Q G+++ ++G I P Sbjct: 1 MKKIIYILLGLALAAVVAIAALVSLIDPNQFKPQLVEQVRKSTGRELVIQGDIGWRFWPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + + + LPLLS ++ + + + HL + Sbjct: 61 LGLSLEQVALRNPAGFAEPDLVRFTRGEASVGLLPLLSHKLEIGKVTLSGAHLFIQTKAD 120 Query: 120 GVSNWFQ----------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD 157 G SN ++ + L+ + ++ + D + Sbjct: 121 GSSNLSDLLKASAEPKGEATTSEPAATTSPPASDKQPWQISLQGVELQQASALLQDDRNG 180 Query: 158 QVYFLSDLNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKR------------ 201 V L L+L + ++ P+++ + + +G Sbjct: 181 TVSRLEQLDLNLGQLAVDQWVPVTLAAKGAQGELAFDLKGAAQLKLAPDASRSELKDVAL 240 Query: 202 -----------SAFKITANFPAKNKAISLKIQLFPLAYPI-------IIDLFGNLFWNEK 243 AF + A+ A + SL + L ++ +E Sbjct: 241 AGSLSEPTQRLDAFSLKADRLALGQWSSLTLSLQGAQGAADKPTLAGTLEGTLKARLDEN 300 Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 + + +V L + +L+G + G ++ L + ++ Sbjct: 301 RQLLEMSDAVLAAKLSGDALPRPQMQVKLAGFARAELGKQAVTLSNLVMGVDDA--LLSG 358 Query: 304 KTKVSQDEENLLNFSENGAESMHD 327 V + F G + D Sbjct: 359 NGSVQLGAVPRVAFDLKGEKLDLD 382 >gi|281602881|gb|ADA75865.1| predicted outer membrane biogenesis protein [Shigella flexneri 2002017] Length = 674 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 114/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGNLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L F + + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYIFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|114321841|ref|YP_743524.1| AsmA family protein [Alkalilimnicola ehrlichii MLHE-1] gi|114228235|gb|ABI58034.1| AsmA family protein [Alkalilimnicola ehrlichii MLHE-1] Length = 699 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 48/373 (12%), Positives = 114/373 (30%), Gaps = 66/373 (17%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED 76 ++ V L +D D+R+ E G+ + ++G + + I P+ ++ + E Sbjct: 20 VIALVAVLLLVDPNDYRDRIEAAVEQETGRSLTIEGDLSLSIFPWLALELGRTTLADAEG 79 Query: 77 G--SFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM 133 + +++ + + + +P LL E+ + +D + + +G NW Sbjct: 80 FHDAPFLEVDQVDVGVQLVPLLLRRELVTRTVVLDGLTVRLMVDEQGRGNWEDLLPEEAD 139 Query: 134 IHN-----------------VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 + + ++ R+ D++S + NL + A ++ Sbjct: 140 PEPAPMPDEPRAPRDLGETLANVGGLDIRNARLSWEDRQSALRLQVDPFNLDLDAVRIDD 199 Query: 177 ISPLSID-------------SIKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAI--- 217 L +D + ++ +GT + D R + + + Sbjct: 200 PMQLQMDWVLTGDDLPRVAGELSSAITVDGTLSHLALDGLRLEVTASGDDLPADGIAASL 259 Query: 218 ----SLKIQLFPLAYP--------IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 + + L +P + +L + P G VA + L L Sbjct: 260 RGNPRVDLDAQALDWPDLVLETLGLRAELALQGRQTDTGPEAEGRLQVATFNLRELIARL 319 Query: 266 SAKKSR-----------LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314 LSG+ + +D + ++ + T + + + Sbjct: 320 ELDAPDTADPDVLTRVGLSGDLRWADEVLHLTGLDWRL----DDTTLNGEISMHDFAGPG 375 Query: 315 LNFSENGAESMHD 327 F E D Sbjct: 376 ARFDLAVDEIDLD 388 >gi|327482793|gb|AEA86103.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 740 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 51/414 (12%), Positives = 119/414 (28%), Gaps = 74/414 (17%) Query: 18 VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-D 76 F + D D++++ A G ++ +KG I + P+ + D + + Sbjct: 21 AAGFALTHLFDPNDYKDEIRDLARNKAGLELDIKGDIGWSLFPWLGLELHDTTLASAQTP 80 Query: 77 GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF----------- 125 G + + L + +PLLS E+++ D+ ++ +L +G NW Sbjct: 81 GQPFADLRMLGLSVRVMPLLSREVQMSDITVNGLNLTLSRDEQGRGNWEGVGQPAGRSEQ 140 Query: 126 ---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + S + ++ + V R+ D ++ Q Y + L Sbjct: 141 AGEPPKAAEPQTEQREEASPARKPLTLDIDSLTVSDARVTYSDAKTGQQYSAESIELTTG 200 Query: 171 ARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAFKI---TANFPAKNKAISL 219 A P+ +++ GS +G FDN+ ++ + A + + Sbjct: 201 AIREGSSIPVKLNAFFGSNQPVMRARTELQGALRFDNQLKRYQFEDMRLSGEASGEPLQG 260 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF---------------------------- 251 + F +++DL + + Sbjct: 261 QTLTFSAQGQLLVDLAAQIAEWNSLKFTANQLRGLGELKARDLDKEAKISGAMTVAQFNL 320 Query: 252 ----SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 G + + ++ L + ++ + L+ + + + Sbjct: 321 REFLQGTGQQLPAMADGNALNRAELVSRLSGTANSLALEELTLKL----DDSTFTGRIAI 376 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361 S L G D + ++E K+ +V Sbjct: 377 SDFARQALRVDLKGDRLNLDRYLSPPSKDEPAGAARKSEVKNTQAAAVGSGSTP 430 >gi|229588118|ref|YP_002870237.1| hypothetical protein PFLU0567 [Pseudomonas fluorescens SBW25] gi|229359984|emb|CAY46838.1| putative membrane protein [Pseudomonas fluorescens SBW25] Length = 689 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 96/355 (27%), Gaps = 43/355 (12%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQKE 75 DW + + + + + A+ G + + +P+P V +D+ + + Sbjct: 30 DWNRIKPPLNAKVSEELHRPFAINGNLAVVWAREPDEGGWRAWVPWPHVIAEDLTLGNPD 89 Query: 76 DG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-----K 128 ++ + +R L LL + + + + +P + G +NW + Sbjct: 90 WSKKPHMVTLKKVELRISPLALLVQRVVIPRIDLTEPDAQLQRLADGRANWTFKFDPKDP 149 Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS---- 184 V + I G + + DQ + L F I+ Sbjct: 150 DAEPSNWVVDIGAIGFDKGHVTLDDQTLKTQLDVIIDPLGKPIPFGEIVGDADAKKALEK 209 Query: 185 ----IKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 + + G + ++ ++ A +Q I L G L Sbjct: 210 GSAPQDYAFALKVKGQYHGQKLDGSGKIGGLLALQDAAKPFPLQAQVKIADTSIALAGTL 269 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNF-----KISDGNVRISRY 288 +AG L G+ + + + R + Sbjct: 270 TDPLNLGALDLRLKLAGSSLGNLYPLTGVTLPDSPAYSTDGHLIAKLHEANGASFRYDNF 329 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSE-NGAESMHDLNETDFFEEEEKKNK 342 + + D V+ L+ + + M DL + K+ Sbjct: 330 NGKIGNSDIHGDL---AYVASQPRPKLSGALVSNQLLMTDLAPLIGADSNAKQKA 381 >gi|152981266|ref|YP_001355333.1| AsmA protein [Janthinobacterium sp. Marseille] gi|151281343|gb|ABR89753.1| AsmA protein [Janthinobacterium sp. Marseille] Length = 667 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 58/370 (15%), Positives = 118/370 (31%), Gaps = 42/370 (11%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH---------- 57 +FS +L+ L DW + + + G+ A+ G + + Sbjct: 2 WSAIVFSALLLVCVLFLLMFDWNRAKPWLNERVSEATGRHFAINGDLILTWQRAEPATGT 61 Query: 58 ---ILPFPSVFFKDIRIDQKEDGSF---ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111 +P P + D+ + E ++I ++ LPLL+ I + + +D P+ Sbjct: 62 WRDWIPAPRLSAHDVTLGNPEWAKPDSNMAEIGHITFSVNPLPLLNKTIVIPSLQLDDPN 121 Query: 112 LNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 L SKG NW ++S + L++++ G I + D+ + + Sbjct: 122 LALQRVSKGKDNWTFKQSDPSE-WTLDLQRLYFYRGEITLKDE----------VEHIDAK 170 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 ++ + P +++ GT N K A KN ++ Sbjct: 171 ANIDTLEPTAVNDFVMGWKISGTFNGARISGDGKAGALLALKNVDKPFPLEARLNVGKTS 230 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFKISDGN 282 I + G + ++ ++G L + L G + G Sbjct: 231 IRVNGTVTKPQELAAIDMRLHLSGASMADLYPLTGITLPKTPEFSTEGHLIGVTNKAGGK 290 Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDE------ENLLNFSENGAESMHDLNETDFFEE 336 ++K + + + + K + NLL S+ G D NE+ Sbjct: 291 WTYEKFKGKVGDSDIAGTLVYEAKQPRPLLSGTVVSNLLQLSDLGPVIGADSNESKKERG 350 Query: 337 EEKKNKNDDL 346 D + Sbjct: 351 VAANQPADKV 360 >gi|170740301|ref|YP_001768956.1| hypothetical protein M446_2059 [Methylobacterium sp. 4-46] gi|168194575|gb|ACA16522.1| conserved hypothetical protein [Methylobacterium sp. 4-46] Length = 1210 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 100/340 (29%), Gaps = 33/340 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R +L L L VVLV A VP F++W R + + +G + G ++I +LP Sbjct: 1 MRDILTALAGLVIVVLVAALAVPPFVNWEGHRAAVDAAVSRSLGLPVRSDGRLEIRLLPS 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P + + + G + PLLSGEIR + I + + +S G Sbjct: 61 PRLRMDHVVLGSP--GRTSLDARYVKAEVALTPLLSGEIRFTETKIGRAEVTVPVSEAGA 118 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + ++ +E + + + + + + LS Sbjct: 119 LVLSPDLGAVLGGRDLAVEDLRIAQLLLTTVVPATGRTDQFY-----------AEAVRLS 167 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + G AEG F++ P + A+ +K P I++ L Sbjct: 168 APRLAGPWRAEGMAG----ALPFRLATGMPLPDGALPVKATAGGETLP-RIEIDARLALV 222 Query: 242 EK-----QPIYSGVFSVA---------GDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 P SG + + L G FK Sbjct: 223 GDAVRGLAPEASGTARLTVASPPPAAGPPGAGGAGRHAPVLPFTLQGGFKAKGRVATFDA 282 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 L+ + + + + + D Sbjct: 283 LTLEIDGGGAPLRLGGRGTLEL-PSLKAALALDARRLDLD 321 >gi|170724078|ref|YP_001751766.1| AsmA family protein [Pseudomonas putida W619] gi|169762081|gb|ACA75397.1| AsmA family protein [Pseudomonas putida W619] Length = 747 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 104/308 (33%), Gaps = 41/308 (13%) Query: 15 VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ- 73 +++ F + D D++++ + A ++ + G I + P+ + + I Sbjct: 18 IIVALGFALTHLFDPNDYKDEIRQLARDKAHVELTLNGDIGWSLFPWLGLELHEASIATL 77 Query: 74 KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW--------- 124 + + ++ L + LPLL E+++ D+ ++ +L +G NW Sbjct: 78 NKPKEPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLTLNRDEQGHGNWEDIGKPLPA 137 Query: 125 ----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 + + + + ++ + V R+ D ++ Q Y + L Sbjct: 138 QTDPTASAPAPAEQPSAPAEGSSERSVKLDIDSLTVNNARVHYTDAKTGQSYTAESIQLS 197 Query: 169 ISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAFKI---TANFPAKNKAI 217 PL + +K G FD K + + + + Sbjct: 198 TGPVHEGANIPLKASAFLSASQPNMKARTELAGELRFDRKLKRYNFEDMRLSGETSGEPL 257 Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 + K F +++D+ N+ I + G LNL K +LSG Sbjct: 258 AGKTMTFAAQGQLLVDMAANVASWNGLKISANQLRALG----ELNLRDLDKTPQLSGGLS 313 Query: 278 ISDGNVRI 285 I+ ++R Sbjct: 314 IAQFDLRT 321 >gi|254492627|ref|ZP_05105798.1| AsmA family [Methylophaga thiooxidans DMS010] gi|224462148|gb|EEF78426.1| AsmA family [Methylophaga thiooxydans DMS010] Length = 820 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 46/388 (11%), Positives = 119/388 (30%), Gaps = 27/388 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R VL + + + + +P +D D++++ Q G+ + ++G I + + P+ Sbjct: 1 MRTVLKLILIVIIIAVASLVALPFVVDPNDYKDEISSQVEKATGRNLTLQGDIGLSVFPW 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 ++ + + + +K+E +R + +PLL ++ + + +D LN Sbjct: 61 IALELGPLSLSNAQGFKADSFAKVEAAEIRIKLMPLLKKQLEMDTVVLDGLVLNLETDKN 120 Query: 120 GVSNWFQRKSTM---------------DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 G +NW + + + + + I D + Y L + Sbjct: 121 GKTNWDDLTQADEVVKEDAKPSQEKSGPALAAISIAGVQLTNANILWSDASKGESYQLRN 180 Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 LNL + + + S E + + N ++ Sbjct: 181 LNLDTDPLTPGEPTAVDMAFDLISAKPEAKAHVTLDTNVMVDMENQQYALTDLAFTTIAE 240 Query: 225 PLAYPI---IIDLFGNLFWNEKQPIYSGV-FSVAGDFSKLLNLELSAKKSRLSGNFKISD 280 P I L G++ + + + + S+ + + ++ N Sbjct: 241 GKTLPFAQADIKLNGDIKADMVKQLVNITGLSLTAKVNNDTQTIDANLTGDVNANLASQQ 300 Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKK 340 V P+ + + + +N + E Sbjct: 301 TTVDGFELTATIKDPSIPGE-----QADLKLTSNINADLKQQTLTLSALMLELEELMLNA 355 Query: 341 N-KNDDLKKDDIQYSVNKKEEKDNSHDK 367 + K +++ D ++ N + + Sbjct: 356 DIKANNILSDKPGFAGNVHIQPFSLRKL 383 >gi|78484463|ref|YP_390388.1| AsmA [Thiomicrospira crunogena XCL-2] gi|78362749|gb|ABB40714.1| AsmA protein [Thiomicrospira crunogena XCL-2] Length = 762 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 43/416 (10%), Positives = 129/416 (31%), Gaps = 54/416 (12%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 R+++ L + ++++ F+D+ ++ E + G + + G I + + PF + Sbjct: 59 RIVMVLAIIPIILVLAFIGAVNFMDYNQYKPQIESEFQKRTGYALKINGPIDVSVWPF-A 117 Query: 64 VFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKG 120 + K + + + ++I+ + + L + + + + +++PHL ++ G Sbjct: 118 LEAKQVELKNRPSFNSPNLAQIDSIQVELSLWNLFVNRHLELLGVELEKPHLFLETNAAG 177 Query: 121 VSNW-------------------------------FQRKSTMDMIHNVILEKIHVKGGRI 149 NW + + L+ ++ I Sbjct: 178 QHNWGLLQKQLAMTAQQPQSPHLRKVAYQVVTTPVAAPSDKSPELVDWHLDSFVLQNAII 237 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------- 202 + ++++ + D +L N + + S + +F+ Sbjct: 238 EWQNEQAQTHLAMEDFDLMAFDISPNQSFKVLTNFQYDSSEIKSGFHFNVASMLMVNNRF 297 Query: 203 --------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF--S 252 + P + ++++L + + D + G S Sbjct: 298 SQWTLSDWTGNVRLVLPKTMQIPEVRVELVGDLFELNFDQQRFHVEQARFRSLKGSLETS 357 Query: 253 VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312 ++G + + + K ++ V + +++L + S + + Q Sbjct: 358 MSGTYGRNAETQGDLKAIHINLRKWFRHSGVSFPNFVDKTVLRDVSAEFNWSQTPEQFSV 417 Query: 313 NLLNFSENGAESMHDL--NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHD 366 L + ++ D+ + + +L D + V+ K + Sbjct: 418 ENLAVQLDQSKITGDIWRKQLTEKPQYRFDLAISELNLDRYEAYVDSKNATQSVQK 473 >gi|284007097|emb|CBA72372.1| outer membrane assembly protein [Arsenophonus nasoniae] Length = 612 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 50/381 (13%), Positives = 111/381 (29%), Gaps = 32/381 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R L L L V+L G T+ L ++ DFR + G + +G ++ H+ P Sbjct: 6 MKRFLTTLAILIVVILAGLTTLVLLVNPNDFRHYLIDKVEQKSGYHLVFQGEMRWHVWPS 65 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ I + + + + PL+S ++ V + I L S Sbjct: 66 LSIITGPISLTAPGATKPAISADNMRLDVSLWPLISHQLSVEQIVISGAVLRSTPDSAAK 125 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 N + ++++ + + S ++ ++ + L S + + Sbjct: 126 LNQDD-PIAPEGLNHISRKN-----------NNASKWLFEINKIKLTDSLLIWQLDNDTQ 173 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 ++ + + F + ++ SLK L YP I N Sbjct: 174 LNMRNIMLSLS-RQDDHFINVNFSSNVSKDQQDLTFSLKSILNIADYPHQIAGEIN---- 228 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 + ++G + A L + + +S + + Sbjct: 229 ------QLEYKMSGINLPTGGISGDATL--LFNYLRDQQPVLTLSNLAINV----NDNHL 276 Query: 302 DNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359 + + + D L + + + + + N Sbjct: 277 TGNLVAQLGKSPDYQLNIASTKLDLDKILGWQPLLQPLIETKITPQISTKPVIATANTDS 336 Query: 360 EKDNSHDKEN-QENFSGDKMI 379 + Q S DK+I Sbjct: 337 YDLGYLKQFPFQATISADKLI 357 >gi|307825391|ref|ZP_07655610.1| AsmA family protein [Methylobacter tundripaludum SV96] gi|307733566|gb|EFO04424.1| AsmA family protein [Methylobacter tundripaludum SV96] Length = 699 Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 52/371 (14%), Positives = 118/371 (31%), Gaps = 38/371 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 + +L + + +++V A +P ID DF+ + G+++ + G +K+ + P+ Sbjct: 6 KIILSTIAAMILLLIVLACILPFVIDPNDFKPEIAAAVKDKTGRELILDGELKLSLFPWF 65 Query: 63 SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + I + + IE ++ LPLLS +I V + + LN + +G Sbjct: 66 GISTGKIALSNAPGFQDRPFATIEESNVTVLLLPLLSKKIEVSRIVLKGLILNLAKNKQG 125 Query: 121 VSNWFQ------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 ++NW + + + ++ RI D ++++ L Sbjct: 126 IANWDDLTTKPVVPAVAVVDKQDEQPIPTATPVMFTIGGMAIENARINWDDLKTEKHIEL 185 Query: 163 SDLNLQISARFLNIISPLSIDSIK--------GSVIAEGTGNFDNKRSAFKIT------- 207 DLNL + + +++ ++ + K F + Sbjct: 186 KDLNLNTDKFTFDEPAGIAVSMTALEAGSTSIQAIKLNTELTVNEKLDTFALRHSDLQVT 245 Query: 208 ---ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE 264 N P K+ +L I L L + + + Sbjct: 246 SSGENVPGKSLTTALTIADAALDMNQQTAKIYGLQLKSGDVTLAAAEMTGTSIKDKPSFQ 305 Query: 265 LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 + S + + + + + L S + D + L + + + Sbjct: 306 GPVTVAPFSPAKVLQQLAISLPAMQDANALSKLSANFDLTATADSADLQNLGLTLDDTQI 365 Query: 325 MHDLNETDFFE 335 +N DF + Sbjct: 366 KGAINIKDFAQ 376 >gi|121603833|ref|YP_981162.1| AsmA family protein [Polaromonas naphthalenivorans CJ2] gi|120592802|gb|ABM36241.1| AsmA family protein [Polaromonas naphthalenivorans CJ2] Length = 670 Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 53/378 (14%), Positives = 110/378 (29%), Gaps = 33/378 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR L GL L V + F W R R + +G++ + + + + Sbjct: 11 LRHWLAGLAILL----VVLVLLLSFFPWDSLRGPINRYVSEQLGRRFEITKHLSVDLGRT 66 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 +V + + I E K LPL+ G++ + + + +P + + Sbjct: 67 TTVRAEGVEIANPEWAHDSYLLKATAAEFDINLLPLIFGKVVLPRIKLTEPMIGLQIEPD 126 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 G +W + T D + + V G + + + + S Sbjct: 127 GRRSWALSRDTSDKSAVPQIGAVVVDQGNVSYLAKAQGADLDV-------------QFSL 173 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITAN---FPAKNKAISLKIQLFPLAYPIIIDLFG 236 + + + G + +++ A ++N S +++ +A + G Sbjct: 174 APEAGNELPLSYKAIGQWKHEKFTANGRAGGVLEFSQNTQASFPLEVNAVAGRTSLKAKG 233 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQ 291 ++ F + G L L +L G D +S+ + Sbjct: 234 SIANLADLAGIDATFDLQGQNLDDLYNLLGVVLPSTPPYKLRGKLDKKDQLWVVSQIQGL 293 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 + Q L + + D + KK + Sbjct: 294 LGKSD----LGGSLSFDQSSAVPL-LTGKVQSRVMDFADLGAVIGMAPSGALAP-KKQAV 347 Query: 352 QYSVNKKEEKDNSHDKEN 369 S KK + NS K + Sbjct: 348 AASNIKKPAQANSSSKAS 365 >gi|300114676|ref|YP_003761251.1| AsmA family protein [Nitrosococcus watsonii C-113] gi|299540613|gb|ADJ28930.1| AsmA family protein [Nitrosococcus watsonii C-113] Length = 798 Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 55/390 (14%), Positives = 125/390 (32%), Gaps = 27/390 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTV----PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 +++ L L VV++ P ID DF+ Q G+++ + G IK+ Sbjct: 1 MKKFLKILFSTLLVVILLIVIAAVVLPFVIDPNDFKPQITAQVEKATGRELTLGGDIKLS 60 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + P+ V KD+ + + +K+ + +R + +PLL ++ + + ++ LN Sbjct: 61 VFPWLGVDLKDVSLSNAPGFGKAPFAKVSDMEVRVKLIPLLEKQLVMDTVVLNGLDLNLA 120 Query: 116 LSSKGVSNW-----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 +++G +NW + + + + + ++ RI D+ D Sbjct: 121 RNAQGKTNWADLAAGESQQISSEEETAPEGESPPPLAGIAIAGLKIEAARIDWRDEVKDV 180 Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218 Y + LNL + + +D + + G+ D + Sbjct: 181 RYTIKKLNLDTDPLVPGEPTQIKLDFDFAASQPDVHGHLDLSGKVTADMEANHYLLQNTD 240 Query: 219 LKIQLFPLAYP---IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 LK+ A P + + L ++ + + K + L GN Sbjct: 241 LKLTAAGPALPIEQLALQLNADIDAFLAKQQLTVSDLKFTSQVKGEQEVQLTLNTSLEGN 300 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNK-TKVSQDEENLLNFSENGAESMHDLNETDFF 334 + + + Q P + + + N + + Sbjct: 301 LAAQQYRLNNLQVETQVATPQFPEPINATLATTASLDLNRETLTLQDLSLATLGIKLKGQ 360 Query: 335 EEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364 + K + LK + + N + + Sbjct: 361 IKGAKILTDPKLKGQLVSNAFNPRRAAETL 390 >gi|163744235|ref|ZP_02151595.1| AsmA family protein [Oceanibulbus indolifex HEL-45] gi|161381053|gb|EDQ05462.1| AsmA family protein [Oceanibulbus indolifex HEL-45] Length = 645 Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 39/358 (10%), Positives = 99/358 (27%), Gaps = 25/358 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R ++ G+G L +++V + Q + + G+++++ G + + P Sbjct: 1 MRWIIRGIGALL-LIVVIMLGALFLLPGERIARIASDQLSRMTGREVSITGDVGVTFWPV 59 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V + + + ++ + LL GEIR+ ++ P + Sbjct: 60 LGVTAGGLEVGNADWTDKGAMLTAANAAIGVDAGALLRGEIRITNIAAQSPVIRLEQRRD 119 Query: 120 GVSNWFQ-----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 G ++W + ++K+ V + D E V ++L Sbjct: 120 GRASWQFTDSASGARIETESEPTASRRPLSIQKLTVTDATLIY-DAEGADVLRYEGVDLA 178 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 + + ++ + T D + + A F Sbjct: 179 LDWPEQGGAADITASMAPAGEAVQLTARIDGFADFLEGGVQPLRADVATRGGEISFDGRG 238 Query: 229 PIIIDLFGNLFWN-EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS-DGNVRIS 286 + L G+L + + F G + L G ++ D + + Sbjct: 239 SLNGALAGDLRIDSADTARFLASFGAGGVTLP----RGLGQSVDLRGGLTLTADRRLALR 294 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344 L + ++ + + + + E + Sbjct: 295 NIALDLG----GNSLTGQADLALNGTPRITANLRTGALDLSALSDEATETGSNGSPTA 348 >gi|332557438|ref|ZP_08411760.1| AsmA family protein [Rhodobacter sphaeroides WS8N] gi|332275150|gb|EGJ20465.1| AsmA family protein [Rhodobacter sphaeroides WS8N] Length = 660 Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 44/346 (12%), Positives = 105/346 (30%), Gaps = 25/346 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R ++ LF + + I E R+ G+ + + G ++ I P Sbjct: 1 MRWLVRLAAVLFGLA-ALFLVALVLIPRERVAELAAREFEAATGRDLTISGDVRPSIWPR 59 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V + + + L + + L L+SG R+ + +++P + ++ Sbjct: 60 LGVRTGPVTVANAPWTDEGPMLEARSLEIGLDTLALMSGAWRISRIALEEPVIRLERDAE 119 Query: 120 GVSNWFQRKST-------------------MDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 G +NW L++ V GGR+ ID+ + Sbjct: 120 GRANWDLSSPPRGAEGRAAEGRASPAPASAQAGFPLFSLDEGLVTGGRVLWIDRAAGTRT 179 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 +S L+L++S + L++ G ++ P + ++ Sbjct: 180 EISGLDLRVSLPEAGGPADLTLSGQANGHGFAVEGRLAEAGTSLAGRVA-PVRLSLVTGA 238 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280 ++ + + ++ G L L ++ L+G +++ Sbjct: 239 ARIGFDGEAGSAPPMAEGTIDAALGDLGDLAALFGQDRPTLPEGLGRRQIALTGGLTLAE 298 Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 G + + + + + Q E L + Sbjct: 299 GG--TLHLRNGQVTADGNRLAVEADLIPQGERPKLEANLRAETLNL 342 >gi|28872021|ref|NP_794640.1| hypothetical protein PSPTO_4907 [Pseudomonas syringae pv. tomato str. DC3000] gi|28855274|gb|AAO58335.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 688 Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 43/381 (11%), Positives = 100/381 (26%), Gaps = 45/381 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G +VL V + DW + + + + + A+ G + + Sbjct: 5 RKIFAWTGTTLLLVLAVLVIVIVTFDWNRIKPTLNEKVSEALHRPFAINGDLDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + + ++ + R LPLL ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLTLGNPDWSKTPQMVNLKHVEFRLSLLPLLVQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + + + I G + DQ + + Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVIDIGAIKFDKGLVSFNDQTLNANLDVV 184 Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212 +++ + I + G + ++ + Sbjct: 185 -IDMLGKPIPFSEIVGSKEAQKAQEKGSVPQDYAFGLAVKGQYHGQKLSGTGKIGGLLAL 243 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270 K+ + +Q + G L + ++G L Sbjct: 244 KDASQPFPVQADVKIGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303 Query: 271 -------RLSGNF-KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321 RL + N R + + + D V+ L+ + Sbjct: 304 PAYSTDGRLVAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSN 360 Query: 322 AESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381 >gi|325273135|ref|ZP_08139432.1| AsmA family protein [Pseudomonas sp. TJI-51] gi|324101740|gb|EGB99289.1| AsmA family protein [Pseudomonas sp. TJI-51] Length = 748 Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 108/352 (30%), Gaps = 46/352 (13%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KE 75 + F + D D++++ + A ++ + G I + P+ + + I + Sbjct: 20 VALGFALTHLFDPNDYKDEIRQLARDKAHVELTLNGDIGWSLFPWLGLELHEASIATLAK 79 Query: 76 DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------- 124 + ++ L + LPLL E+++ D+ ++ +L +G NW Sbjct: 80 PKEPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLTLARDEQGHGNWEDIGKPLPAQP 139 Query: 125 ---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 + + ++ + V R++ D ++ Q Y + L Sbjct: 140 GTATDAPAQAPSEQKPAAADGNERPVKLDIDSLTVNNARVQYTDAKTGQSYSAESIQLST 199 Query: 170 SARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAFKI---TANFPAKNKAIS 218 PL + IK G FD K + + + Sbjct: 200 GPVHEGANIPLKASAFVSANQPNIKARTELAGELRFDRKLKRYNFEDMRLSGETSGEPTG 259 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278 K F +++D+ N+ + + G LNL K +LSG I Sbjct: 260 GKTVAFVAQGQLLVDMAANVASWNGLKVSANQLRALG----ELNLRDLDKTPQLSGGLSI 315 Query: 279 SDGNVR-ISRYKLQSILPNSSTDEDNKTKV--SQDEENLLNFSENGAESMHD 327 + ++R + + K ++ + S + D Sbjct: 316 AQFDLRTFLDGIGHPLPATNDPAAFGKLELVTRLQGTPS-SLSLDDLAVKLD 366 >gi|317046369|ref|YP_004114017.1| AsmA family protein [Pantoea sp. At-9b] gi|316947986|gb|ADU67461.1| AsmA family protein [Pantoea sp. At-9b] Length = 686 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 47/413 (11%), Positives = 117/413 (28%), Gaps = 44/413 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 +VL + +F +++V V DW + ++ + + + A++G + + Sbjct: 6 KVLSWVIGIFLLLVVVIVVVIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVAWVRNRD 65 Query: 57 -----HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V DI + ++ + L LL ++ + + + + Sbjct: 66 EPGWRSWVPWPQVHADDIMLGNPPTIPDVTMVHLQRVEATLAPLALLHKQVYLPWIKLQR 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P ++ +NW + + L+ I G+++ D + Sbjct: 126 PDARLVQTADKHNNWTFNLASSSNGEANAAPSAWSFRLDNILFDQGQVRYRDAINQADVS 185 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVI--AEGTGNFDNKRSAFKITAN--FPAKNKAI 217 ++ L + + G + + +G ++N+R + +++ Sbjct: 186 VTINPLGKPVPYTQVAGGDDQQQGAGDFVFGWQASGTYNNQRLDGEGKIGGMLSLRSQTT 245 Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS------- 270 +Q+ + + G L +GD L Sbjct: 246 PFPLQVDVRNGTTRVRVDGTLQDPLNLGGLDVRLRFSGDTLANLYGLTGVLLPDTPPYET 305 Query: 271 --RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES-M 325 L F G + R ++ + Q L + + M Sbjct: 306 DGHLIARFNDEKGALFRYEKFNGHIGDSD----IHGSLVYRQGKPRPSLTGDLSSNQLRM 361 Query: 326 HDLNETDFFEEEEKKNKN--DDLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376 DL + K ++ + + D ++ D Sbjct: 362 ADLGPLIGVNSGKGSEKTQQAKAQRGAASTQPADRVLPHDKFDTKSWGAMDAD 414 >gi|238793269|ref|ZP_04636896.1| hypothetical protein yinte0001_37020 [Yersinia intermedia ATCC 29909] gi|238727437|gb|EEQ18964.1| hypothetical protein yinte0001_37020 [Yersinia intermedia ATCC 29909] Length = 704 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 45/410 (10%), Positives = 116/410 (28%), Gaps = 67/410 (16%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 +VL +G L ++L + DW + + + + + A++G + + Sbjct: 6 KVLTAIGGLIVLLLAATVIFVMTFDWNRLKPTINDKVSAELQRPFAIRGNLGVDWSRQGD 65 Query: 58 ------ILPFPSVFFKDIRIDQKED------------------GSFESKIEGLSMRAEFL 93 +P+P ++ +D+ + D ++ + L Sbjct: 66 EPGWRGWVPWPHIYAEDLVLGNPPDLVSDKTDNKDNPPATDFPAGEMVTLKRIDASIAPL 125 Query: 94 PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------FQRKSTMDMIHNVILEKIHVKG 146 LL+ + + +++ QP + G +NW + +V ++ I Sbjct: 126 ALLAQRVWIPRIWLTQPDAKLLRLANGNNNWTFNLANSPVQGEAPPSAWSVNIDDIVFDR 185 Query: 147 GRIKIIDQE-SDQVYFLSD-------LNLQISARFLNIISPLSIDSIKGS----VIAEGT 194 G I + D +++ + D R P++ + + + Sbjct: 186 GEISLSDATLKAELHAVIDPLGKPLPFAEVTGKRNEKKDKPVTDKAQSNTPDYVFGWKID 245 Query: 195 GNFDNKRSAFKITANFPA--KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS 252 G + + + + ++ +Q + + + G L Sbjct: 246 GKYQGQPLSGSGKIGGMLSMSDASVPFPLQADVRSGSTRVAVVGTLTDPGNLAGLDLQLK 305 Query: 253 VAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQSILPNSSTDED 302 +G L + RL + K + G V + + + + Sbjct: 306 FSGTSLDNLYPLIGVLLPATPPYNTDGRLIASLKQTGGAVYHYQNFNGKIGDSDINGSLT 365 Query: 303 NKTK------VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346 + L F++ D N+ E + + + Sbjct: 366 YTASQPRPKLTGKMSSEKLRFTDLAPLIGADSNQEKANRGERNRQPANKV 415 >gi|121998114|ref|YP_001002901.1| AsmA family protein [Halorhodospira halophila SL1] gi|121589519|gb|ABM62099.1| AsmA family protein [Halorhodospira halophila SL1] Length = 696 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 108/337 (32%), Gaps = 42/337 (12%) Query: 18 VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED- 76 V V ID D+R+D A +G+++ ++G I+ P+ + + + E Sbjct: 21 VAIAVVATVIDPNDYRDDLAELAERELGRELEIEGEIEWSFFPWLGIEIGRVTLADAEGY 80 Query: 77 -GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF---------- 125 +I+ LS + PLL GE+ + +++P + G NW Sbjct: 81 YDEPFVEIDRLSAAVQVWPLLRGELHTRAVELERPIVRLMRDEDGRDNWADLAERFAAAE 140 Query: 126 --------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 + ++ + +++ + + G + D+ D+ L L Sbjct: 141 DEHEDDTAAQESADSESPAQDSPADLEALGGIVIGGLRLHEGAVYWEDRSEDRQIQLDPL 200 Query: 166 NLQISARFLNIISPLSIDSIKG---SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 NL++ L+ + D + G V G + +I A++ +Q Sbjct: 201 NLEVDTLRLDEPVGVRADVLVGDEERVAFSGEARLSQTDAGPEIAASWTLDPLDPKGLLQ 260 Query: 223 LFPLAYPIIID------LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF 276 P D L G+ + + + + + + + + F Sbjct: 261 ALGEEPPETTDPEVMRSLSGSGTIDATAERIDVTRLILDLDDSRVEAQAAIEPEQPTIEF 320 Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313 + + Y L + + + + +N Sbjct: 321 AAQLDRIDLDGY-LPPEAAEGEANGNGNGETATANDN 356 >gi|238797061|ref|ZP_04640564.1| hypothetical protein ymoll0001_2250 [Yersinia mollaretii ATCC 43969] gi|238719106|gb|EEQ10919.1| hypothetical protein ymoll0001_2250 [Yersinia mollaretii ATCC 43969] Length = 707 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 49/426 (11%), Positives = 118/426 (27%), Gaps = 67/426 (15%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 +VL G+G + ++LV A + DW + + + + + A++G + + Sbjct: 6 KVLTGIGGVILLLLVVAIVFIMTFDWNRLKPTINDKVSAELQRPFAIRGNLGVDWSRKGD 65 Query: 58 ------ILPFPSVFFKDIRIDQKE----------------------DGSFESKIEGLSMR 89 +P+P + +D+ + ++ + Sbjct: 66 EPGWRGWVPWPHIHAEDLVLGNPPELVSDKSTDDKNVDDKTASTAFPAGEMVTLKRVDAS 125 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW------FQRKSTMDMIHNVILEKIH 143 L LL+ E+ + +++ QP N + G +NW ++ +V ++ I Sbjct: 126 IAPLALLAKEVWIPRIWLTQPDANLRRLANGNNNWTFNLANSPKEGEQPSSWSVNIDDIV 185 Query: 144 VKGGRIKIIDQ--ESDQVYFLSDL-------NLQISARFLNIISPLSIDSIKGS---VIA 191 G I++ D ++D + L + + SP + Sbjct: 186 FDRGEIRLNDAILKADLRAVIDPLGKPLPFAEVTGARNEKKGQSPADSAQSNTADYVFGW 245 Query: 192 EGTGNFDNKRSAFKITANFPA--KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 + G + + + + +Q + + + G L Sbjct: 246 KIDGKYQGQPLVGSGKIGGMLSMSDASRPFPLQADLRSGSTRVAVAGTLTDPGNLAGLDM 305 Query: 250 VFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQSILPNSST 299 +G L + RL + K + G V + + + Sbjct: 306 QLKFSGASLDNLYPLIGVLLPSTPPYNTDGRLVASLKQAGGAVYHYENFNGKIGDSDIRG 365 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359 + L + + + + ++ K V E Sbjct: 366 NLTYTAS---QPRPKLTGNMSSEKLRFADLAPLIGADSNQEKARRGEKNRQPANKVLPDE 422 Query: 360 EKDNSH 365 + D Sbjct: 423 KFDTQS 428 >gi|126461487|ref|YP_001042601.1| AsmA family protein [Rhodobacter sphaeroides ATCC 17029] gi|126103151|gb|ABN75829.1| AsmA family protein [Rhodobacter sphaeroides ATCC 17029] Length = 660 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 44/346 (12%), Positives = 105/346 (30%), Gaps = 25/346 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R ++ LF + + I E R+ G+ + + G ++ I P Sbjct: 1 MRWLVRLAAVLFGLA-ALFLVALVLIPRERVAELAAREFEAATGRDLTISGDVRPSIWPR 59 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V + + + L + + L L+SG R+ + +++P + ++ Sbjct: 60 LGVRTGPVTVANAPWTDEGPMLEARSLEIGLDTLALMSGAWRISRIALEEPVIRLERDAE 119 Query: 120 GVSNWFQRKST-------------------MDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 G +NW L++ V GGR+ ID+ + Sbjct: 120 GRANWDLSSPPRGAEGRAAEGRASPAPASAQAGFPLFSLDEGLVTGGRVLWIDRAAGTRT 179 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 +S L+L++S + L++ G ++ P + ++ Sbjct: 180 EISGLDLRVSLPEAGGPADLTLSGQANGHGFAVEGRLAEAGTSLAGRVA-PVRLSLVTGA 238 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280 ++ + + ++ G L L ++ L+G +++ Sbjct: 239 ARIGFDGEAGSAPPMAEGTIDAALGDLGDLAALFGQDRPALPEGLGRRQIALTGGLTLAE 298 Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 G + + + + + Q E L + Sbjct: 299 GG--TLHLRNGQVTADGNRLAVEADLIPQGERPKLEANLRAETLNL 342 >gi|89053507|ref|YP_508958.1| AsmA [Jannaschia sp. CCS1] gi|88863056|gb|ABD53933.1| AsmA [Jannaschia sp. CCS1] Length = 656 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 40/332 (12%), Positives = 110/332 (33%), Gaps = 14/332 (4%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R + +G + + + L I + + T G+ + + G + + P Sbjct: 1 MRWIFRVIGAVIVLFFLA-LGTVLLIPAERIAQVASDRITAATGRTVTISGEARPTLWPD 59 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + +R+ + + +++ + LLSG+IRV + + ++ Sbjct: 60 LGIVIEGLRVGNPAWAGHAPMIEAARVNVGVAWNGLLSGDIRVERAVFEGAQITLVRAAD 119 Query: 120 GVSNWFQ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 G+++W + + ++ + R+ +D+E+ + ++ LN + Sbjct: 120 GLTSWDMGGGGEEATGAPVQIGFDEAVIVEARVHYLDEEAGADWDVTQLNATMRLPEAGG 179 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 + + V E D + A N + + + +D Sbjct: 180 AVAIEGTAQVNGVPLELETTIDGVAALLAGEARPLQAN--LRWQGGSAAFDGALGLDATA 237 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI-SDGNVRISRYKLQSILP 295 + + ++ G L L + ++G+ ++ +G+V + L+ Sbjct: 238 QGALDLTAEDLGPLVALTGGAMPDLPHGLGRDRIAVTGDVRLAQEGSVHLREGVLRL--- 294 Query: 296 NSSTDEDNKTKVSQDEE-NLLNFSENGAESMH 326 T + E+ +L + G + Sbjct: 295 -DETVLSVAADLLPGEDRPMLRGTVTGGDIAL 325 >gi|304415341|ref|ZP_07396020.1| putative assembly protein [Candidatus Regiella insecticola LSR1] gi|304282804|gb|EFL91288.1| putative assembly protein [Candidatus Regiella insecticola LSR1] Length = 608 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 44/382 (11%), Positives = 117/382 (30%), Gaps = 53/382 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R++L L L ++ + T+ L ++ DFR + +Q +G ++ G ++ H+ Sbjct: 26 MRKLLTILIILLTMSVSCMATLVLLVNPNDFRAEMVKQVKKKMGYQLHFDGNLRWHVGAQ 85 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ I + E + + + PLL + + ++ + +N SK Sbjct: 86 LSIIAGRITLTSLGAEIPVVSAENIRLDVKLWPLLFQRLEIKEVMLKAAVINLIPESKSK 145 Query: 122 SNWFQRKS--TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 D + + +I + + I Q +++ + +LNL ++ + Sbjct: 146 ETTAASNHFANADFGWELDISRIKLVD-SLLIWQQVNNEQINIRNLNLDLTKNNHH---- 200 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 + N ++ SL L YP ++ N Sbjct: 201 --------------------VKVLLSSQVNRNQRDLIFSLAADLDLQHYPQTVNANVN-- 238 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 + + G + + K + +++ + V + + + + Sbjct: 239 --------QLSYRLEGADIPVAGIS---GKGSMQASYQSASRTVMLKEIDITA----NDN 283 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHD-LNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358 + + + + D L E+ + ++ + I + Sbjct: 284 TFEGNAQAELGDIPHYLINLTAQNINLDTLLESQSSKNHRQEKAKQPVTAPVIAFQKQSH 343 Query: 359 EEKDNSHDKENQENFSGDKMIL 380 +F+ ++ Sbjct: 344 --------LRPLRDFNARVTLM 357 >gi|301383724|ref|ZP_07232142.1| hypothetical protein PsyrptM_13868 [Pseudomonas syringae pv. tomato Max13] gi|302059300|ref|ZP_07250841.1| hypothetical protein PsyrptK_04872 [Pseudomonas syringae pv. tomato K40] gi|302131573|ref|ZP_07257563.1| hypothetical protein PsyrptN_09282 [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 688 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 43/381 (11%), Positives = 100/381 (26%), Gaps = 45/381 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G +VL V + DW + + + + + A+ G + + Sbjct: 5 RKIFAWTGTTLLLVLAVLVIVIVTFDWNRIKPTLNEKVSEALQRPFAINGDLDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + + ++ + R LPLL ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLTLGNPDWSKTPQMVNLKHVEFRLSLLPLLVQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + + + I G + DQ + + Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVIDIGAIKFDKGLVSFNDQTLNANLDVV 184 Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212 +++ + I + G + ++ + Sbjct: 185 -IDMLGKPIPFSEIVGSKEAQKAQEKGSVPQDYAFGLAVKGQYHGQKLSGTGKIGGLLAL 243 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270 K+ + +Q + G L + ++G L Sbjct: 244 KDASQPFPVQADVKIGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303 Query: 271 -------RLSGNF-KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321 RL + N R + + + D V+ L+ + Sbjct: 304 PAYSTDGRLVAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSN 360 Query: 322 AESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381 >gi|330873746|gb|EGH07895.1| hypothetical protein PSYMP_04700 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 688 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 42/381 (11%), Positives = 100/381 (26%), Gaps = 45/381 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G +VL V + DW + + + + + A+ G + + Sbjct: 5 RKIFAWTGTTLLLVLAVLVIVIITFDWNRIKPTLNEKVSEALHRPFAINGDLDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + + ++ + R LPLL ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLTLGNPDWSKTPQMVNLKHVEFRLSLLPLLVQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + + + I G + DQ + + Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVIDIGAIKFDKGLVSFNDQTLNANLDVV 184 Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212 +++ + I + G + ++ + Sbjct: 185 -IDMLGKPIPFSEIVGSKEAQKAQEKGSVPQDYAFGLAVKGQYHGQKLSGTGKIGGLLAL 243 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270 K+ + +Q + G L + ++G L Sbjct: 244 KDASQPFPVQADVKIGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303 Query: 271 -------RLSGNF-KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321 RL + N R + + + D ++ L+ + Sbjct: 304 PAYSTDGRLVAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYIASQPRPKLSGVLVSN 360 Query: 322 AESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381 >gi|312883694|ref|ZP_07743418.1| AsmA protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309368667|gb|EFP96195.1| AsmA protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 727 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 55/435 (12%), Positives = 132/435 (30%), Gaps = 69/435 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L+ LG + + + + +D F+ Q G + V G I+ P Sbjct: 1 MKKLLLVLGIVILTISIALLALVTLVDPNQFKPLLVEQVKKNTGLDLVVDGDIQWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + ++ K++ + + +PLL ++ + ++ + L+ Sbjct: 61 LGFSLGKTELRNPDEFENQNLFKVDTIGIDVSVIPLLQKKLEIGNVNLSGAELHIETLKD 120 Query: 120 GVSNWFQRKSTMD----------------------------------MIHNVILEKIHVK 145 G N ++ L I V Sbjct: 121 GKRNIDVLSQKSSVTEQQTVSSSAQSTAPQSDNVSSSKDGSGTGLSTDDWSINLAGITVS 180 Query: 146 GGRIKIIDQESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201 ++I D+++ L D++ Q+S ++ I + + + +G F ++ Sbjct: 181 DTSVEIQDRKAGTYTKLYDVSFQLSEFAFDQWTKIDFAMKGQNNQQKFATQGRAEFKLQQ 240 Query: 202 SAFK-----------------------ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 I + A KA SL ++ A + +DL G+ Sbjct: 241 DLVSYTLRDIELDASLSDPQTKIERAVIGLDTFAFGKANSLTYEVVGQASGLDLDLKGSS 300 Query: 239 FWNEKQPIYSGVFS--VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 + + + +L S + +S + L+ + N Sbjct: 301 TLTIDPEMTKLLMGPLKLKATLQGASLPQSPMNIDMDSTLSFDITQKHLS-FVLKKLAAN 359 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356 D KT + + + FS + D E + +D++ + + Sbjct: 360 D-LLFDGKTDATLSDIPKIRFSLHSPNIDLD--EFLGLSRSVNEPSHDEVASETPTAPKS 416 Query: 357 KKEEKDNSHDKENQE 371 + + + S +++ E Sbjct: 417 SQSKPEQSQPEQSDE 431 >gi|330505504|ref|YP_004382373.1| AsmA family protein [Pseudomonas mendocina NK-01] gi|328919790|gb|AEB60621.1| AsmA family protein [Pseudomonas mendocina NK-01] Length = 741 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 46/396 (11%), Positives = 120/396 (30%), Gaps = 68/396 (17%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFE 80 + D D++++ + A + +KG I + P+ + D + + Sbjct: 25 ALTHLFDPNDYKDEIRQIAHDKANLDLQLKGDIGWSLFPWLGLELTDATLASADTPDKPF 84 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------------- 125 + + + + +PLL E+++ D+ +D +LN KG NW Sbjct: 85 ADLRMIGLSVRVMPLLRKEVQMSDIRVDGLNLNLQRDDKGHGNWEGVGRPAQASTTQPAP 144 Query: 126 -------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + ++ + + R+ D + Q + + ++ L+ A Sbjct: 145 SEPAPSGDTPPSQPSEKPAGQPLKLDIDSLTLSNSRVDYSDAQKGQQFTVENIELKTGAI 204 Query: 173 FLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF---KITANFPAKNKAISLKI 221 P+ + ++ EG FD + + + A + + K Sbjct: 205 REGASIPVKFSAFFGTNQPVLRARSEVEGQLRFDRALKRYQFEDLKLSGEASGEPLKGKT 264 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS-----KLLNLELSAKKSRLSGNF 276 F +++D N+ + + G+ + + + L+ Sbjct: 265 LNFSAQGQLLLDQAANIAEWNGLKLSANQMRALGEIKARELGEDAKISGGLSIASLNLRE 324 Query: 277 KISDGNVRIS---------RYKL--------------QSILPNSSTDEDNKTKVSQDEEN 313 + V++ +++L + L + K V+ + Sbjct: 325 FLDGIGVQLPAMQAGDALNQFELVSRLNGSSKGMMFEELNLKLDGSTFTGKLGVADVSKQ 384 Query: 314 LLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349 L G + D ++ + ++K+ Sbjct: 385 ALRVDLKGDKLDLDRYLPPKAKDSAAAARKAEVKES 420 >gi|332163400|ref|YP_004299977.1| hypothetical protein YE105_C3780 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667630|gb|ADZ44274.1| hypothetical protein YE105_C3780 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862177|emb|CBX72340.1| uncharacterized protein yhjG [Yersinia enterocolitica W22703] Length = 713 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 48/432 (11%), Positives = 116/432 (26%), Gaps = 73/432 (16%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 +VL G+ + ++L+ A DW + + + + + A++G + + Sbjct: 6 KVLTGIVGVILLLLIAAIVFIKTFDWNRLKPTINEKVSTELQRPFAIRGNLGVDWSRKGD 65 Query: 58 ------ILPFPSVFFKDIRIDQKED------------------------------GSFES 81 +P+P + +D+ + D Sbjct: 66 EPGWRGWVPWPHIHAEDLVLGNPPDLVGGNAAGKNNNVVGKSNNAESKTESTAFPTGEMV 125 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------FQRKSTMDMI 134 ++ + L LL+ E+ + +++ QP + G +NW + Sbjct: 126 TLKRVDASIAPLALLAKEVWIPRIWLTQPDATLLRLADGKNNWTFNLANSPAGDESSASD 185 Query: 135 HNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDL-------NLQISARFLNIISPLSIDSI 185 +V ++ I G+I + D ++D + L + + + Sbjct: 186 WSVNIDDIVFDRGQINLKDAVLKADLQAVIDPLGKPLPFAEVTGARNEKKATEKAQNKAP 245 Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243 + G + + + +I +Q + + + G L Sbjct: 246 DFVFGWKIDGKYQGQPLTGSGKIGGMLSMNDASIPFPLQADVRSGSTRVAVAGTLTDPAN 305 Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQSI 293 +G L + RL + K + G V R + + Sbjct: 306 LAGLDLQLKFSGASLDNLYPLIGVLLPATPPFNTDGRLIASLKQAGGAVYRYENFNGKIG 365 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353 + D L + + + + ++ N + Sbjct: 366 DSDIHGDLTYTAS---QPRPKLVGNMSSDKLRFADLAPLIGADSNQEKANRGERSRQPSN 422 Query: 354 SVNKKEEKDNSH 365 V E+ D Sbjct: 423 KVLPTEKFDTKS 434 >gi|296105254|ref|YP_003615400.1| AsmA family protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059713|gb|ADF64451.1| AsmA family protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 680 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 49/385 (12%), Positives = 104/385 (27%), Gaps = 43/385 (11%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 RV+ +F +++V A + DW + ++ + + + A++G + + Sbjct: 6 RVISWTAGIFLLLIVVAIIIIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKE 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V DI + D + + L LL+ + + + + Q Sbjct: 66 ETGWRSWIPWPHVHADDIVLGNPPDIPAVTMVHLPRVEATLAPLALLTKTVYLPWIKLQQ 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLASSGEKDPNAQPSSWSFRLDNILFDRGRIAIDDKVSKADVE 185 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L F + + + TG ++ + ++ Sbjct: 186 ILVDPLGKPLPFSEVTGTKAKGDNASAGDYVFGLRATGRYNGQPLTGTGKIGGMLALRSA 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS----- 270 +Q + + G + AGD L Sbjct: 246 GTPFPVQADFRSGNTRVAFTGTVNDPMNMGGVDLQLKFAGDSLGELYELTGVLLPDTPPF 305 Query: 271 ----RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES 324 L +V + + + + L + Sbjct: 306 ETDGHLVAKLDTEKSSVFDYRNFNGRIGDSD----IHGTLTYTTGKPRPKLEGDVESRQL 361 Query: 325 MHDLNETDFFEEEEKKNKNDDLKKD 349 + K K+ ++KKD Sbjct: 362 RLADLGPLIGVDSGKGTKSKEVKKD 386 >gi|290511904|ref|ZP_06551272.1| hypothetical protein HMPREF0485_03676 [Klebsiella sp. 1_1_55] gi|289775694|gb|EFD83694.1| hypothetical protein HMPREF0485_03676 [Klebsiella sp. 1_1_55] Length = 683 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 50/406 (12%), Positives = 112/406 (27%), Gaps = 45/406 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56 R+ L+ + +++V V DW + ++ + + + A++G + + Sbjct: 5 RKTLVIITGTILLLIVLFLIVLATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQP 64 Query: 57 ------HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P+P V +DI + + + L LLS + + + ++ Sbjct: 65 DERGWRSWIPWPHVHAEDIVLGNPPAIPQVTMIHLPRVEATLAPLALLSKTVYLPWIKLE 124 Query: 109 QPHLNFYLSSKGVSNWFQR--------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 QP + ++ +NW + + + L+ I G I I D+ + Sbjct: 125 QPDVRLIRLAEDNNNWTFQLAGDQRTSGDSAPSSWSFRLDNILFDRGTIAIDDKITRSDI 184 Query: 161 FL------SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214 + L + S + + +G KI ++ Sbjct: 185 TILVDPLGKPLPFSEVTGTKDQHSAAKVGDYVFGLSLKGRYKDQPVTGNGKIGGMLALRS 244 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270 + +Q + + G + AGD + L Sbjct: 245 ASTPFPLQGDFHSGNTRVAFSGTVSDPLNVGGIDLRLKFAGDSLRDLYDLTGVLLPETPS 304 Query: 271 -----RLSGNFKISDG-NVRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAE 323 RL +FK + + + + + L+ + Sbjct: 305 FSTDGRLRADFKQKNRMRFDYQDFNGRIGDSD----IHGSLTYTTGKPRPKLSGDMESKQ 360 Query: 324 SMH-DLNETDFFEEEEKKNKNDDLKKDD-IQYSVNKKEEKDNSHDK 367 DL + + K + D Q + DK Sbjct: 361 LRLADLGPLIGVDSGKGTKKGAARQAGDRPQPAGKVLPADRFETDK 406 >gi|77462553|ref|YP_352057.1| hypothetical protein RSP_2006 [Rhodobacter sphaeroides 2.4.1] gi|77386971|gb|ABA78156.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1] Length = 660 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 44/346 (12%), Positives = 106/346 (30%), Gaps = 25/346 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R ++ LF + + + E R+ G+ + + G ++ I P Sbjct: 1 MRWLVRLAAVLFGLA-ALFLVALVLMPRERVAELAAREFEAATGRDLTISGDVRPSIWPR 59 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V + + + L + + L L+SG R+ + +++P + ++ Sbjct: 60 LGVRTGPVTVANAPWTDEGPMLEARSLEIGLDTLALMSGAWRISRIALEEPVIRLERDAE 119 Query: 120 GVSNWFQRKST-------------------MDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 G +NW L++ V GGR+ ID+ + Sbjct: 120 GRANWDLSSPPRGAEGRAAEGRASPAPASAQAGFPLFSLDEGLVTGGRVLWIDRAAGTRT 179 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 +S L+L++S + L++ G ++ P + ++ Sbjct: 180 EISGLDLRVSLPEAGGPADLTLSGQANGHGFAVEGRLAEAGTSLAGRVA-PVRLSLVTGA 238 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280 ++ + + ++ G L L ++ L+G +++ Sbjct: 239 ARIGFDGEAGSAPPMAEGTIDAALGDLGDLAALFGQDRPTLPEGLGRRQIALTGGLTLAE 298 Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 G + + +S+ + Q E L + Sbjct: 299 GG--TLHLRNGQVTADSNRLAVEADLIPQGERPKLEANLRAETLNL 342 >gi|86136538|ref|ZP_01055117.1| AsmA family protein [Roseobacter sp. MED193] gi|85827412|gb|EAQ47608.1| AsmA family protein [Roseobacter sp. MED193] Length = 645 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 50/387 (12%), Positives = 104/387 (26%), Gaps = 28/387 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ +L LG L V + Q G+K+ G ++ + P Sbjct: 1 MKLILRILGA-VVATLAVLLVVLFMLPGEKVAGLAADQIEAQTGRKLTFHGKVRFTLWPV 59 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V + + E LS+ LL G++RV ++ PHLN +++ Sbjct: 60 LGVKSDGVSLSNAPWAGPEPMLTAERLSIGISAGDLLQGKVRVTEVSALLPHLNLSENAE 119 Query: 120 GVSNWFQ-------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 G NW + + +EK+ + G ++ +S ++ Sbjct: 120 GQGNWVLGGGADAGADPAVVAPENQSAVLPISIEKLTLTGASLRY-QPHQGAPIEMSMVD 178 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 + + + + + + + F N + S+ L Sbjct: 179 MMLRWPDPSGTVNVDLTARPAGAPVQIQAEVG----TFADFLNGAVSSIGASVAADGGIL 234 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK--ISDGNVR 284 + DL G + ++L ++ + G +DG + Sbjct: 235 RFDGRADLTGAATGRVTAKTSDTAAFLTAFGQSGISLPQGLGQAMVVGADATYTTDGRLA 294 Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-LNETDFFEEEEKKNKN 343 + L + ++ + NG L Sbjct: 295 LRDMTLDL----DGNKLEGGADITLAQVPEFTAQLNGGHLRVPGLTSAVGENGAAAGEGG 350 Query: 344 DDLKKDDIQYSVNKKEEKDNSHDKENQ 370 KD I S + E+ Sbjct: 351 SGWSKDPIDASALAQANGTAVLSFESL 377 >gi|206578613|ref|YP_002236114.1| AsmA family protein [Klebsiella pneumoniae 342] gi|206567671|gb|ACI09447.1| AsmA family protein [Klebsiella pneumoniae 342] Length = 683 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 50/406 (12%), Positives = 112/406 (27%), Gaps = 45/406 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56 R+ L+ + +++V V DW + ++ + + + A++G + + Sbjct: 5 RKTLVIITGTILLLIVLFLIVLATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQP 64 Query: 57 ------HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P+P V +DI + + + L LLS + + + ++ Sbjct: 65 DERGWRSWIPWPHVHAEDIVLGNPPAIPQVTMIHLPRVEATLAPLALLSKTVYLPWIKLE 124 Query: 109 QPHLNFYLSSKGVSNWFQR--------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 QP + ++ +NW + + + L+ I G I I D+ + Sbjct: 125 QPDVRLIRLAEDNNNWTFQLAGDQRTSGDSAPSSWSFRLDNILFDRGTIAIDDKITRSDI 184 Query: 161 FL------SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214 + L + S + + +G KI ++ Sbjct: 185 TILVDPLGKPLPFSEVTGTKDRHSAAKVGDYVFGLSLKGRYKDQPVTGNGKIGGMLALRS 244 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270 + +Q + + G + AGD + L Sbjct: 245 ASTPFPLQGDFHSGNTRVAFSGTVSDPLNVGGIDLRLKFAGDSLRDLYDLTGVLLPETPS 304 Query: 271 -----RLSGNFKISDG-NVRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAE 323 RL +FK + + + + + L+ + Sbjct: 305 FSTDGRLRADFKQKNRMRFDYQDFNGRIGDSD----IHGSLTYTTGKPRPKLSGDMESKQ 360 Query: 324 SMH-DLNETDFFEEEEKKNK-NDDLKKDDIQYSVNKKEEKDNSHDK 367 DL + + K + D Q + DK Sbjct: 361 LRLADLGPLIGVDSGKGTKKGDARQAGDRPQPAGKVLPADRFETDK 406 >gi|146309272|ref|YP_001189737.1| AsmA family protein [Pseudomonas mendocina ymp] gi|145577473|gb|ABP87005.1| AsmA family protein [Pseudomonas mendocina ymp] Length = 741 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 53/400 (13%), Positives = 124/400 (31%), Gaps = 76/400 (19%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFE 80 + D D++++ + A ++ ++G I + P+ + D + + Sbjct: 25 ALTHLFDPNDYKDEIRQIARDKANLELQLRGDIGWSLFPWLGLELTDATLASADTPDKPF 84 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------------- 125 + + + + +PLL E+++ D+ +D +LN KG NW Sbjct: 85 ADLRMIGLSVRVMPLLRKEVQMSDIRVDGLNLNLQRDDKGRGNWEGVGRPAQASATQPAP 144 Query: 126 -------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + ++ + + RI D + Q + L ++ L+ A Sbjct: 145 SEPAPSKDAPPSQPSEKPAGQPVKLDIDSLTLSNSRIDYSDAQKGQQFTLENIELKTGAI 204 Query: 173 FLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF---KITANFPAKNKAISLKI 221 P+ + ++ EG FD + + A + + K Sbjct: 205 REGASIPVKFSAFFGTNQPVLRARSEVEGQLRFDRVLKRYQFEDLKLAGEASGEPLKGKT 264 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281 F +++DL N+ + + G + K ++LSG I+ Sbjct: 265 LNFSAQGQLLVDLAANIAEWNGLKLSANQLRALG----EIKARELDKDAKLSGGLSIAPL 320 Query: 282 NVR------------------ISRYKL--------------QSILPNSSTDEDNKTKVSQ 309 N+R +S+++L + L + K V+ Sbjct: 321 NLREFLEGVGVELPPMQAANSLSQFELASRLNGSSKGMMLEELNLKLDGSTFTGKLGVTD 380 Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349 L G + + ++ + ++K+ Sbjct: 381 FARQALRADLKGDKLDLNRYLPPKAQDSAGAARKAEVKES 420 >gi|39937217|ref|NP_949493.1| hypothetical protein RPA4157 [Rhodopseudomonas palustris CGA009] gi|39651075|emb|CAE29598.1| possible asmA protein, assembly of outer membrane proteins [Rhodopseudomonas palustris CGA009] Length = 667 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 115/342 (33%), Gaps = 32/342 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R+ I + L + + GAF + L ID R+ E+Q G ++ V G I + I P Sbjct: 24 IKRLGISVAVLIAAAVTGAFALSLTIDRGALRQAVEQQLRAATGLQLVVDGDIDVTIFPR 83 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 +V F ++R+ EDG ++ L LPLL + D+ ++QP ++ + Sbjct: 84 STVTFSNVRLKSDEDGGTDAALSVKTLITNLRLLPLLLRRFEIADVMLNQPSIHVVRDAG 143 Query: 120 GVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 G SNW R + V +I ++ G + D+ + + D++L ++ Sbjct: 144 GRSNWTPFIDSLTRTMKPGLDDQVSFSEIRLQDGELSYRDETAGVQEHIDDIDLSLAWPS 203 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 ++ + G G D + A I L++ P+ I Sbjct: 204 ISRTF-----AATGQFDFRGE-RLDGSITVADFIAALRGDTSGIKLRLA----GAPMKIA 253 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRI 285 G + N+ G S + + L + ++ + Sbjct: 254 FDGTIA-NKTSLSLIGTVSADSASLRNALRWAGQEPPGTGGFGRFALKARANLIGASIAL 312 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQ-DEENLLNFSENGAESMH 326 + ++ + + L + Sbjct: 313 TNVNVEL----DKNVAEGVMTYTLAGGHQGLQATLAAGSIDV 350 >gi|157825605|ref|YP_001493325.1| outer membrane assembly protein [Rickettsia akari str. Hartford] gi|157799563|gb|ABV74817.1| outer membrane assembly protein [Rickettsia akari str. Hartford] Length = 830 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 49/373 (13%), Positives = 132/373 (35%), Gaps = 21/373 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + L +F+ +++ +P FI +++ + + + + + G IK+ +LP Sbjct: 1 MPKNLKYSLIIFTSIILLLVVMPFFIPLDNYKGVIIDKVKEVTNRDLTINGNIKLSLLPN 60 Query: 62 PSVFFKDIRID--QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 P++ +I++ +E PL G I V + + +P +N + + Sbjct: 61 PAISLSEIKLSSINGTKDPHLVSVESAKASLRLFPLFRGAIEVASIELQKPIINLEVLNN 120 Query: 120 GVSNWFQRKSTMDMIH-----------------NVILEKIHVKGGRIKIIDQESDQVYFL 162 G NW S +++ + G++ I++ S+++ Sbjct: 121 GQKNWLFDTSNNKPKKNHFSYAESTNTKSELELPILISHFKIIDGKVIYIEKNSEKILND 180 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 +L +I + I L++ +++ + +G N ++ I Sbjct: 181 INLETKIKSLKGPIDFTLALSALQQQINIDGNIEELRPIIPLSANINLASEKIKIEGNFD 240 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGD-FSKLLNLELSAKKSRLSGNFKISDG 281 ++ ++ GN + + + N+ + + + +++ Sbjct: 241 SENNSFIGKANIKGNTKTLAMPAYLQNDYELTTAITADNKNVTIKDARLNYTNIELLANA 300 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341 N I R L+S + + + + + D+ N++ + + + D + + N Sbjct: 301 NYDIERNNLKSNIIVNPGNIITELSSNLDKTNII-LQADSLKPILDALKLKIDKLPPIIN 359 Query: 342 KNDDLKKDDIQYS 354 + L + I S Sbjct: 360 QKLMLTSNVISNS 372 >gi|237798317|ref|ZP_04586778.1| AsmA family protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021169|gb|EGI01226.1| AsmA family protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 688 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 43/381 (11%), Positives = 96/381 (25%), Gaps = 45/381 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G +VL V + DW + + + + + A+ G + + Sbjct: 5 RKIFAWTGATLLLVLALLIIVIVTFDWNRIKPTLNEKVSEALHRPFAINGDLDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + E ++ + R LPLL ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLMLGNPEWSKTPQMVTLKHVEFRLSLLPLLVQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW V + I G + DQ + + Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPDAEPSKWVVDIGAIKFDKGLVSFNDQTLNANLDVV 184 Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212 +++ I + G + ++ + Sbjct: 185 -IDMLGKPIPFGEIVGSKEAQKAQEKGAVPQDYAFGLAVKGQYHGQKLSGTGKIGGLLAL 243 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270 K+ +Q + G L + ++G L Sbjct: 244 KDANQPFPVQADVKIGDTHAVIAGALTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303 Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321 G + + R + + + D V+ L+ + Sbjct: 304 PAYATDGRLIAKLHDPAGASFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSN 360 Query: 322 AESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381 >gi|167031330|ref|YP_001666561.1| AsmA family protein [Pseudomonas putida GB-1] gi|166857818|gb|ABY96225.1| AsmA family protein [Pseudomonas putida GB-1] Length = 748 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 99/307 (32%), Gaps = 42/307 (13%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KE 75 + F + D D++++ + A ++ + G I + P+ + + I + Sbjct: 20 VALGFALTHLFDPNDYKDEIRQLARDKAHVELTLNGDIGWSLFPWLGLELHEASIATLAK 79 Query: 76 DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------- 124 + ++ L + LPLL E+++ D+ ++ +L +G NW Sbjct: 80 PKEPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLTLARDEQGHGNWEDIGKPLPAQN 139 Query: 125 ---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 D + ++ + V R++ D ++ Q Y + L Sbjct: 140 GTTAGAPAQPPAEQKPTTADNNDRAVKLDIDSLTVNNARVQYTDAKTGQSYSAESIQLST 199 Query: 170 SARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAFKI---TANFPAKNKAIS 218 PL + IK G FD K + + + Sbjct: 200 GPVHEGANIPLKASAFISASQPSIKARTELAGELRFDRKLKRYNFEDMRLSGETSGEPTG 259 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278 K F +++DL N+ + + G LNL K +LSG I Sbjct: 260 GKTVTFAAQGQLLVDLAANVASWNGLKVSANQLRALG----ELNLRDLDKAPQLSGGLSI 315 Query: 279 SDGNVRI 285 + N+R Sbjct: 316 AQFNLRT 322 >gi|318607897|emb|CBY29395.1| uncharacterized protein YhjG [Yersinia enterocolitica subsp. palearctica Y11] Length = 713 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 48/432 (11%), Positives = 116/432 (26%), Gaps = 73/432 (16%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 +VL G+ + ++L+ A DW + + + + + A++G + + Sbjct: 6 KVLTGIVGVILLLLIAAIVFIKTFDWNRLKPTINEKVSTELQRPFAIRGNLGVDWSRKGD 65 Query: 58 ------ILPFPSVFFKDIRIDQKED------------------------------GSFES 81 +P+P + +D+ + D Sbjct: 66 EPGWRGWVPWPHIHAEDLVLGNPPDLVGGNAAGKNNNVVGKSNNAESKTESTAFPTGEMV 125 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------FQRKSTMDMI 134 ++ + L LL+ E+ + +++ QP + G +NW + Sbjct: 126 TLKRVDASIAPLALLAKEVWIPRIWLTQPDATLLRLADGKNNWTFNLANSPAGDESSASD 185 Query: 135 HNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDL-------NLQISARFLNIISPLSIDSI 185 +V ++ I G+I + D ++D + L + + + Sbjct: 186 WSVNIDDIVFDRGQINLKDAVLKADLQAVIDPLGKPLPFAEVTGARNEKKATEKAQNKAP 245 Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243 + G + + + +I +Q + + + G L Sbjct: 246 DFVFGWKIDGKYQGQPLTGSGKIGGMLSMNDASIPFPLQADVRSGSTRVAVAGTLTDPAN 305 Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQSI 293 +G L + RL + K + G V R + + Sbjct: 306 LAGLDLQLKFSGASLDNLYPLIGVLLPATPPFNTDGRLIASLKQAGGAVYRYENFNGKIG 365 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353 + D L + + + + ++ N + Sbjct: 366 DSDIHGDLTYTAS---QPRPKLVGNMSSDKLRFADLAPLIGADSNQEKANRGERSRQPSN 422 Query: 354 SVNKKEEKDNSH 365 V E+ D Sbjct: 423 KVLPTEKFDTKS 434 >gi|330963380|gb|EGH63640.1| hypothetical protein PSYAC_01782 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 688 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 41/380 (10%), Positives = 99/380 (26%), Gaps = 43/380 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G +VL V + DW + + + + + A+ G + + Sbjct: 5 RKIFAWTGTTLLLVLAVLVIVIVTFDWNRIKPTLNEKVSEALHRPFAINGDLDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + + ++ + R LPLL ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLTLGNPDWSKTPQMVNLKHVEFRLSLLPLLVQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + + + I G + DQ + + Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVIDIGAIKFDKGLVSFNDQTLNANLDVV 184 Query: 164 --------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAK 213 + + ++ + G + ++ + K Sbjct: 185 IDMLGKPIPFSEIVGSKEAQKAQEKGAVPQDYAFGLAVKGQYHGQKLSGTGKIGGLLALK 244 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + + +Q + G L + ++G L Sbjct: 245 DASQPFPVQADVKIGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDSP 304 Query: 271 ------RLSGNF-KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENGA 322 RL + N R + + + D ++ L+ + Sbjct: 305 AYSTDGRLVAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GFIASQPRPKLSGVLVSNQ 361 Query: 323 ESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 362 LLFSDLAPLIGADSNAAQKK 381 >gi|293393476|ref|ZP_06637787.1| AsmA family protein [Serratia odorifera DSM 4582] gi|291424077|gb|EFE97295.1| AsmA family protein [Serratia odorifera DSM 4582] Length = 693 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 45/378 (11%), Positives = 100/378 (26%), Gaps = 39/378 (10%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRI 71 DW + + + + + A++G + + +P+P + +DI + Sbjct: 26 IATFDWNRLKPAINEKVSAELQRPFAIRGDLGVAWTRNKDEGGWRAWVPWPHIHAEDIVL 85 Query: 72 DQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKS 129 G ++ + L LL ++ + +++ QP+ + G +NW + Sbjct: 86 GNPAAIPGEHMVTLQRVDASIAPLALLGKQLSIPRIWLKQPNARLQRLANGENNWTFHLA 145 Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS- 188 D V I + D + + + L P S + K Sbjct: 146 NSDSDPQAAASDWSVNIHDIVFDRGQLDYKDAVLKADFRAQIDPLGKPLPFSEVTGKKQQ 205 Query: 189 ---------VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGN 237 + G ++ + + +N + +Q + + + G Sbjct: 206 GEAVTPDYVFGWKVQGRYNGEPLSGSGKIGGMLSLQNAQLPFPLQADVRSGSTRVVVAGT 265 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFKISDGNV-RISR 287 L K +GD L L+ G V + Sbjct: 266 LSDPLKLAGLDVQLKFSGDSLGNLYPLTGVLLPNTPPYATDGHLTAKLHDKGGAVYQYQN 325 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347 + + + D V+ L + + + N K Sbjct: 326 FAGKIGDSDIHGDLR---YVASKPRPKLTGEVVSKQLRFADLAPLIGADTNAEKANRGEK 382 Query: 348 KDDIQYSVNKKEEKDNSH 365 V E D++ Sbjct: 383 TRQPSDRVLPVERFDSNS 400 >gi|322832464|ref|YP_004212491.1| AsmA family protein [Rahnella sp. Y9602] gi|321167665|gb|ADW73364.1| AsmA family protein [Rahnella sp. Y9602] Length = 616 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 41/363 (11%), Positives = 110/363 (30%), Gaps = 52/363 (14%) Query: 18 VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG 77 G ++ I+ DFR+ + + G ++A+ G ++ H+ P S+ + Sbjct: 17 AGMTSLVFLINPNDFRQYMVERVEVKSGYQLAINGSLRWHVWPQLSIIAGQTSLTAPGAK 76 Query: 78 SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQRKSTMDM--- 133 + E + + + PL+S ++ V + + + + N ST Sbjct: 77 APVVSAENMRLDVKLWPLISHQLAVKQVLLKNAVIRLTPETEENQPNAPVAPSTPTPVAP 136 Query: 134 -------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186 ++KI V + I + D+ + D+NL++ Sbjct: 137 GASELEAGWKFDIDKISVAD-SLLIWQRGDDEQINVRDINLEMEKNDNR----------- 184 Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 N ++ + ++K L YP + I Sbjct: 185 ------------QASIQLSSRINRDQRDLSFTMKADLDMQHYPQAVS----------ASI 222 Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 + + G + L+ + + +++ + + +++ L + + Sbjct: 223 SKFTYQLNGADIPVKGLQGNG---SMQVSYQRDNNMLTLNQLALSA----NDNQISGTAS 275 Query: 307 VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHD 366 E + + D + +E+ ++ + + E+ + +D Sbjct: 276 AKLGELADYQLNLTADKLDLDALSGWQPDTQEQSSQTAQSVTSAPVIARDVDEQPNGLND 335 Query: 367 KEN 369 + Sbjct: 336 LQT 338 >gi|154251008|ref|YP_001411832.1| AsmA family protein [Parvibaculum lavamentivorans DS-1] gi|154154958|gb|ABS62175.1| AsmA family protein [Parvibaculum lavamentivorans DS-1] Length = 677 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 39/290 (13%), Positives = 94/290 (32%), Gaps = 29/290 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R++ + L V++ VP+ I ++ G+ + + G I + P Sbjct: 1 MSRLIAIIVGLILVLVAVIVAVPMLIPMETYKNQVIATVKQQTGRDLRIDGDIGLSFFPN 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 +V +++ + ++ + + +PL SG I + + P ++ + Sbjct: 61 IAVSLENVGFSNASWAREPEMASMKEMRAALKLMPLFSGNIEIDSFSLVDPVIHLEVRRD 120 Query: 120 GVSNWFQRKSTMDMIHN--------------VILEKIHVKGGRIKIIDQESDQVYFLSDL 165 G NW + + V L + V+ G + ++ Y + Sbjct: 121 GTPNWQFEAAQAAAPESSAATEDGGGSSLGGVRLGDVSVRNGTATYRNAQTGASYAAERV 180 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP-AKNKAISLKIQLF 224 N+ L++ + IA G+ ++ + A+ P A + + L Sbjct: 181 NM-----------DLALPGLDDPFIANGSLVWNGDEIGIDLRADRPRALTEGGETPVALT 229 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274 A + G + + ++G + + L + G Sbjct: 230 ISAPKVDASYSGTVKPLDGLA-FAGEVDLNVPSVRELAAWSGSPLPAGDG 278 >gi|120603205|ref|YP_967605.1| AsmA family protein [Desulfovibrio vulgaris DP4] gi|120563434|gb|ABM29178.1| AsmA family protein [Desulfovibrio vulgaris DP4] Length = 701 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 55/443 (12%), Positives = 123/443 (27%), Gaps = 68/443 (15%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 ++R L + +++L L D R + G+ +++ G + + + P Sbjct: 4 LMRFALFTFAAIIAIILFVVMAARLAFDPEALRSRAATTIAEMTGRSVSISGPVTLDLWP 63 Query: 61 FPSVFFKDIRIDQKEDG---SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 +V F+ + + E S I +PL S + + ++ H+N Sbjct: 64 RLAVDFEGLAMAPPEGFADASPLLTIGKADASLRIIPLFSRRMEFDHIRLEGLHINLVRD 123 Query: 118 SKGVSNWFQR--------------------KSTMDMIHNVILEKIHVKGGRIKIIDQESD 157 + G NW L+++ + + + D + Sbjct: 124 ADGNGNWTPPAGRTITTPVPSEKDSGANPSAMPDVPRPAFSLQRLELADATLSLRDIATG 183 Query: 158 QVYFLSDLNLQISARFLNIISPLSIDSIKG---------------SVIAEGTGNFDNKRS 202 + D++ + + G + A+G+ + + Sbjct: 184 ESIRARDIDFVADFDAEGKAAVGLSLVLAGERPTFSTGLALDATVTPRADGSVSLELAPL 243 Query: 203 AFKITAN-FPAKNKAISLKIQLFPLAY----PIIIDLFG-NLFWNEKQPIYSGVFSVAGD 256 A + PA L+ +L + P + + G NL G S A + Sbjct: 244 AITPHSGVIPAAVGQTQLRGRLNIIPAKEGQPARLTIEGMNLTAPFMTATVDGSLSAARE 303 Query: 257 FSKLLNLELS-------------------AKKSRLSGNFKISDGNVRISRYKLQSILPNS 297 S LE S K+ G+ ++ +++S + Sbjct: 304 ASLSFALEGSPRKGLAAFGILLDTRATDALDKATAKGDVNVAGQKLQLSGMDARI----D 359 Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNK 357 ST + + + + + D + K + Q + Sbjct: 360 STTFKGDVLIPLSGDTPVKGTVALGDIDIDRYLPGKDAHKTKSSGTAP-GPPSDQPKADA 418 Query: 358 KEEKDNSHDKENQENFSGDKMIL 380 S + + D +L Sbjct: 419 PPASSTSDKASGKSAATKDDTVL 441 >gi|33593788|ref|NP_881432.1| hypothetical protein BP2839 [Bordetella pertussis Tohama I] gi|33563861|emb|CAE43111.1| exported protein, conserved [Bordetella pertussis Tohama I] gi|332383190|gb|AEE68037.1| hypothetical protein BPTD_2791 [Bordetella pertussis CS] Length = 702 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 46/395 (11%), Positives = 100/395 (25%), Gaps = 57/395 (14%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQ 73 +DW + QA+ +G+ A++G + + +P+P D+ I Sbjct: 28 TLDWNRLKPTINEQASAALGRPFAIQGDLSVQWACEPGQGGWRGWVPWPHFVVHDVAIAN 87 Query: 74 KEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--RKS 129 + R LPLL + + + + + + GV+NW + Sbjct: 88 TVWARDPNLLTLRRGEFRLAPLPLLRQRVVIRRIQLSGLRADLQRRADGVANWEFTMPDT 147 Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL-----------------------SDLN 166 V ++ I G I+ D + + +D Sbjct: 148 GEPSPWKVDIDAIGFDQGAIRYADAIAQADLDVLVDPLGKPVPFAELAGAPAAGGAADQA 207 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLF 224 + + + + G + + ++ +Q Sbjct: 208 AGKADSGKAADAAAPAAPPDYAFGWQVNGRYKDLPLEGTGKVGGMLALRDARQPFPVQAE 267 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGN 275 I + G L +AG L RL Sbjct: 268 VAIGSTRIAVAGTLTDPMSLGALDLRLKLAGASMANLYPLTGVTLPDTPPYSTDGRLVAR 327 Query: 276 FKISDG-NVRISRYKLQSILPNSSTDEDNKTKVSQDE-ENLLNFSENGAES-MHDLNETD 332 + S G + + + + + L+ + M DL Sbjct: 328 LQDSKGARFEYRDFNGKVGASD----LHGDITFALQQPRPRLSGKLSSRLLRMADLGPLI 383 Query: 333 FFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + K+ + +K Q + ++ D+ Sbjct: 384 GVQSGGAKSVKAEGEKAVAQPADKVLPVQEFRTDR 418 >gi|311104055|ref|YP_003976908.1| AsmA family protein 1 [Achromobacter xylosoxidans A8] gi|310758744|gb|ADP14193.1| AsmA family protein 1 [Achromobacter xylosoxidans A8] Length = 695 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 44/411 (10%), Positives = 112/411 (27%), Gaps = 42/411 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ IG+ ++++ V DW + +A+ +G+ A+ G + + Sbjct: 6 KIAIGIVGGAALLVAVLVVVIATFDWNRAKPFINERASAAIGRPFAINGDLSVEWGRDSD 65 Query: 57 -----HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P + DI + + ++ + LPLL + + + + + Sbjct: 66 GGGWRAWVPWPHIIANDISVGNAPWAKAPQFATLKRGELSLALLPLLRQRVVIRRIQLTE 125 Query: 110 PHLNFYLSSKGVSNWFQ--RKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDL 165 P + + G +NW ++ + + +I GR+ ++D+ ++D + L Sbjct: 126 PAADLQRLADGRANWEFTLPETGEPSPWVLDINEIGFDKGRVGLVDEVLKADLTVLVDPL 185 Query: 166 NLQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAFKITANFPAKNKAI 217 + + + + + +G + K+ ++ Sbjct: 186 GKPVPFADVAGAAFAAEEGGAAPSPRDYVFGWKLDGKYKGLATKGEGKVGGMLALQDARQ 245 Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RL 272 +Q + G L ++G L Sbjct: 246 PFPVQADVAIGGTRASVAGTLTDPVNLGALDLRLKLSGASMAQLYPLTGVTLPDTPPYST 305 Query: 273 SGNFKISDGN-----VRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH 326 G+ N + + + + L + + Sbjct: 306 DGHLVAKLRNPGGAVFDYKGFNGKVGNSD----LHGDISFALGMPRPKLTGKLSSKQLRM 361 Query: 327 -DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376 DL + D KD K + + + D Sbjct: 362 EDLGPLIGVPSGKVAGAATDQAKDAPAKPKGGKVLPTQAFRTDRWRDMDAD 412 >gi|146313553|ref|YP_001178627.1| AsmA family protein [Enterobacter sp. 638] gi|145320429|gb|ABP62576.1| AsmA family protein [Enterobacter sp. 638] Length = 686 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 52/407 (12%), Positives = 114/407 (28%), Gaps = 46/407 (11%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 R++ + +F +++V A + DW + ++ + + + A++G + + Sbjct: 6 RIVTWVAGIFLLLIVVAIIIIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKD 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V DI + D + + L LL+ + + + + Q Sbjct: 66 ETGWRSWVPWPHVHANDIVLGNPPDIPEVTMVHLPRVEATLAPLALLTKTVYLPWIKLQQ 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNDNWTFNLASSDEKDPNAPPSSWSFRLDNILFDRGRIAIDDKVSKADVE 185 Query: 162 LSDLNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L F + D + + TG ++ + +++ Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKDDTQKVGDYVFGLKATGRYNGQPLTGSGKIGGVLALRSE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS----- 270 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNSRVAFVGTVNDPMKMGGVDVQLKFSGDSLGELYDLTGVLLPDTPPF 305 Query: 271 ----RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES 324 RL +V + + + + L + Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRNFNGRIGDSD----IRGSLTYTTGKPRPKLEGDLESRQL 361 Query: 325 MH-DLNETDFF--EEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 DL + +K K+ + KK + K + + + Sbjct: 362 RLADLGPLIGVDSGKGAQKAKSAEQKKGEKDIQPADKVLPYDRFETD 408 >gi|148545562|ref|YP_001265664.1| AsmA family protein [Pseudomonas putida F1] gi|148509620|gb|ABQ76480.1| AsmA family protein [Pseudomonas putida F1] Length = 748 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 100/306 (32%), Gaps = 42/306 (13%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KE 75 + F + D D++++ + A ++ + G I + P+ + + I + Sbjct: 20 VALGFALTHLFDPNDYKDEIRQLARDKAHVELTLNGDIGWSLFPWLGLELHEASIATLNK 79 Query: 76 DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------- 124 + ++ L + LPLL E+++ D+ ++ +L +G NW Sbjct: 80 PKEPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLTLARDEQGHGNWEDIGKPLPAQN 139 Query: 125 ---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 + D + ++ + V R++ D ++ Q Y + L Sbjct: 140 GAGTDAQAQAPAEQTPATTDSNDRAIKLDIDSLTVNNARVQYTDAKTGQNYSAESIQLST 199 Query: 170 SARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAFKI---TANFPAKNKAIS 218 PL + IK G FD K + + + Sbjct: 200 GPVHEGANIPLKASAFISASQPSIKARTELAGELRFDRKLKRYNFEDMRLSGETSGEPTG 259 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278 K F +++DL N+ + + G LNL K +LSG I Sbjct: 260 GKTVTFAAQGQLLVDLAANVASWNGLKVSANQLRALG----ELNLRDLDKAPQLSGGLSI 315 Query: 279 SDGNVR 284 + N+R Sbjct: 316 AQFNLR 321 >gi|220936108|ref|YP_002515007.1| AsmA family protein [Thioalkalivibrio sp. HL-EbGR7] gi|219997418|gb|ACL74020.1| AsmA family protein [Thioalkalivibrio sp. HL-EbGR7] Length = 712 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 48/368 (13%), Positives = 115/368 (31%), Gaps = 66/368 (17%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SF 79 + D +++ G+ + ++G I + + P+ + + + E Sbjct: 24 YLIATFDPNAYKDRISAVVKEQTGRDLVIEGEIGLSLFPWLGLSLGETWLSNAEGFADEP 83 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR------------ 127 ++I + + +PLL E++V + + +LN ++G SNW Sbjct: 84 FARIGEVELSVALMPLLRRELQVQRIRLVGLNLNLERDAQGRSNWDDLVAEAEADGREDR 143 Query: 128 -----KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + ++ + + + R+ D ++ + LNL++ L + +PLS+ Sbjct: 144 ERHEGAGEGPGLKDLDIGGVEILDARVSWRDAQAGTALRVDPLNLELGRIRLGVETPLSL 203 Query: 183 D--------SIKGSVIAEG--TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 +++ SV + D +R A + + L + Sbjct: 204 SLTLIQEDPALRASVDLNALVNVDLDAQRYALRRLVARLQAEGEALPRAMEVKLEADAAV 263 Query: 233 DLFGNLF----------------------WNEKQPIYSGVFSVAGDFSKLLNLELS---- 266 +L ++ ++P+ +G + L +L Sbjct: 264 NLAEDVASLERLTLESLGVQLVGLVRVNNLTGEKPVATGELRSNTFSVRELLTQLGEAAP 323 Query: 267 -------AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319 KK + F+ + +S+ +Q T +VS E + Sbjct: 324 ETADPEVLKKVAVDLAFEANAEAASLSQLLIQL----DDTRLRGSARVSNFERPAIRAEL 379 Query: 320 NGAESMHD 327 + D Sbjct: 380 DVDRINLD 387 >gi|124265859|ref|YP_001019863.1| hypothetical protein Mpe_A0666 [Methylibium petroleiphilum PM1] gi|124258634|gb|ABM93628.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 697 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 36/317 (11%), Positives = 84/317 (26%), Gaps = 30/317 (9%) Query: 25 LFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFE 80 + W R + G+ + + G + + + +RI + Sbjct: 52 WIVPWKLNPLRGWIGERVQAATGRTLVIDGDLWWRFGRHGRLTAEGLRIGNPAWAGRADF 111 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILE 140 + + + PLL G I + + +QP L + G W ++ D + L Sbjct: 112 LQARRVELEVALWPLLRGRIVLPHVRAEQPDLWLERAPDGRRTWRLERAQNDGKRTLFLG 171 Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200 + + G + + +D + + AE +G +++ Sbjct: 172 SVALDRGVVTYAETARRAEVRF--------------AVQTRVDGGRPRLQAEASGRWNDL 217 Query: 201 RSAFKITANF--PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS 258 + + +N+ +L I G++ + +AG Sbjct: 218 PVKGRAEGDEVLQLRNEDQPYAFELDGRIGGTAIAANGSIVRPREPQRADLRIELAGSSL 277 Query: 259 KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313 + + G + +K + + + Sbjct: 278 GEWHRIAGVGLPDTPPYKTEGRLRFDGTRWTYEDFKAVVGRSD----LGGRVAFERR-AP 332 Query: 314 LLNFSENGAESMHDLNE 330 FS S DL + Sbjct: 333 RSLFSGELVSSSLDLAD 349 >gi|320182584|gb|EFW57474.1| hypothetical protein YhjG [Shigella boydii ATCC 9905] Length = 686 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLATLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271 +Q + + G + K +GD L Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305 Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327 G KI + Y+ + S + + L + D Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365 Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 L + + K+K + KK + K + + + Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408 >gi|330954803|gb|EGH55063.1| AsmA family protein [Pseudomonas syringae Cit 7] Length = 741 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + D + + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120 Query: 117 SSKGVSNW------------------------FQRKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAVASTETSGETTPAPAPDAPKTDRPSQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204 D + + + L P+ + + ++ G D + Sbjct: 181 DARKGRTFMAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240 Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244 + + + + K F +++DL N+ Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300 Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290 P SG S+A + + +S + ++ + L Sbjct: 301 LDKTPQISGGLSIAQLDLRAFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALDNLNL 360 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348 + + + V + L G D EE + K + +++ Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARKSEVQS 416 Query: 349 DDIQYSVNKKEEKD 362 + + + Sbjct: 417 GEAAAAAGDSPLPE 430 >gi|84623369|ref|YP_450741.1| hypothetical protein XOO_1712 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84367309|dbj|BAE68467.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 342 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 84/243 (34%), Gaps = 15/243 (6%) Query: 33 REDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRA 90 R ER + G++ + G + + + +V + + + +++ + Sbjct: 2 RGPVERAVSAKTGREFHL-GHLDVDLGRITTVRGERLSLGNASWSKRGAMAELNAAEIDV 60 Query: 91 EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIK 150 E PLL G++R+ ++ ++ P L + + + L ++ V GR++ Sbjct: 61 ELWPLLRGKLRLPEIRLEHPTLLLEAGNDSHPGNWVFDQSHSDSSMPRLGRLLVNNGRLQ 120 Query: 151 IIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF 210 ID S + +N ++P S D + +G G + A K Sbjct: 121 YIDDASRSDVDV----------AINSLAPPSSDQRAAPISIDGKGRWKGYPFALKGNTAS 170 Query: 211 PAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268 P + +I L A + G L + ++ +++G L L S Sbjct: 171 PLELSQSEHPFRIDLRGSAGATRTHVRGTLTNPFQLRVFDLQMALSGQDMADLYLLASQY 230 Query: 269 KSR 271 Sbjct: 231 HPH 233 >gi|209884410|ref|YP_002288267.1| AsmA [Oligotropha carboxidovorans OM5] gi|209872606|gb|ACI92402.1| AsmA [Oligotropha carboxidovorans OM5] Length = 989 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 110/318 (34%), Gaps = 26/318 (8%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEG 85 F+DW ++ FE +A+ +VG + V+G + +LP P + + + +D + Sbjct: 12 FVDWNKYKPQFEVEASRVVGAPVRVEGALDARLLPAPILRMHKLSVGAPKD-PTKLTAGK 70 Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVK 145 L + LL GE R + + L+ L G + ++++ + Sbjct: 71 LDVEFSLGSLLRGEWRATQLSLTGLALDIGLDKDGR--IIAPAKGEFNFGELAIDRLDLA 128 Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK 205 GR+ + D S + L L+ + R S+ G++ EG+ + + F+ Sbjct: 129 -GRVTLHDAASGAAHVLDGLDFRGDVR-----------SLGGNLRGEGSFLLRDAKQPFR 176 Query: 206 ITANFPAKNKAISLKIQLF-PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE 264 + + N+A L++ L A + G L + + P + L Sbjct: 177 LALSKAGDNEATRLRLDLDSAAAGSVASSFDGTLAFENRVPRF---------AGALALGA 227 Query: 265 LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 R++ + ++ +L S + + ++ L + + + Sbjct: 228 ADEMPWRITARTTLDPSGAAFTQGQLLSGTEATGLKLAGEGALAFKPA-KLRVALSAPQL 286 Query: 325 MHDLNETDFFEEEEKKNK 342 D + K Sbjct: 287 DLDRALAENKTLHGKTPA 304 >gi|283787833|ref|YP_003367698.1| outer membrane assembly protein [Citrobacter rodentium ICC168] gi|282951287|emb|CBG90982.1| putative outer membrane assembly protein [Citrobacter rodentium ICC168] Length = 689 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 43/402 (10%), Positives = 108/402 (26%), Gaps = 41/402 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 +++ + F +++V + DW + ++ + + + A++G + + Sbjct: 11 KIIAAVTGTFLLLIVVLIVLIATFDWNWLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +D+ + D + + L LLS + + + + + Sbjct: 71 ETGWRSWVPWPHVHAEDVILGNPPDIPQVTMVHLPRVEATLAPLALLSKTVWLPWIKLVK 130 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 131 PDARLIRLSEKNNNWTFDLAEDENKDPNAQPSSWSFRLDNILFDQGRIAIDDKVSKADLE 190 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS--VIAEGTGNFDNKRSAFKITAN--FPAKNKAI 217 + L F + + + G ++ + + +++ Sbjct: 191 ILVDPLGKPLPFSEVTGSKGEKANVEDYVFGLKAKGRYNGEPLSGTGKIGGMLALRSEES 250 Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS------- 270 +Q + + G + K +GD L Sbjct: 251 PFPVQADFRSGNTRVAFAGVVNDPMKMGGVDLQLKFSGDSLAELYDLTGVLLPDTPPFET 310 Query: 271 --RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH 326 RL +V + + + + L + Sbjct: 311 DGRLVAKIDAEKSSVFDYRGFNGRIGDSD----IHGSLTYTTGKPRPKLEGDLESKQLRL 366 Query: 327 DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 + K + + + +K +D+ Sbjct: 367 ADLGPLIGVDSGKGAEQSKRSEQKKGEKNVQPADKVLPYDRF 408 >gi|221638407|ref|YP_002524669.1| AsmA family protein [Rhodobacter sphaeroides KD131] gi|221159188|gb|ACM00168.1| AsmA family protein precursor [Rhodobacter sphaeroides KD131] Length = 662 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 42/346 (12%), Positives = 105/346 (30%), Gaps = 25/346 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R ++ LF + + + E R+ G+ + + G ++ I P Sbjct: 3 MRWLVRLAAVLFGLA-ALFLVALVLMPRERVAELAAREFEAATGRALTISGDVRPSIWPR 61 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V + + + L + + L L+SG R+ + +++P + ++ Sbjct: 62 LGVRTGPVTVANAPWTDEGPMLEARSLEIGLDTLALMSGAWRISRIALEEPVIRLERDAE 121 Query: 120 GVSNWFQRKST-------------------MDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 G +NW L++ V GGR+ ID+ + Sbjct: 122 GRANWDLSPPPRGTEAAAAEGQAGPAPASAQAGFPLFSLDEGLVTGGRVLWIDRAAGLRT 181 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 +S L++++S + L++ G ++ P + ++ Sbjct: 182 EISGLDMRVSLPEAGGPADLTLSGQANGHGFAVEGRLAEAGTSLAGRVA-PVRLSLVTGA 240 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280 ++ + + ++ G L L ++ L+G +++ Sbjct: 241 ARIGFDGEAGSAPPMAEGTIDAALGDLGDLAALFGQDRPTLPEGLGRRQIALTGGLTLAE 300 Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 G + + + + + Q E L + Sbjct: 301 GG--TLHLRNGQVTADGNRLAVEADLIPQGERPKLEANLRAETLNL 344 >gi|308188830|ref|YP_003932961.1| hypothetical protein Pvag_3375 [Pantoea vagans C9-1] gi|308059340|gb|ADO11512.1| Uncharacterized protein yhjG [Pantoea vagans C9-1] Length = 686 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 52/384 (13%), Positives = 108/384 (28%), Gaps = 41/384 (10%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + I +P+P V +DI + Sbjct: 28 TFDWNRLKPTINQKVSAELNRPFAIRGDLGIDWARNRDEAGWRRWVPWPQVHAEDIMLGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------ 125 D ++ + L LL E+ + + + +P ++ +NW Sbjct: 88 PPDIPDVTMVHLQRVDATLSPLSLLHKELFIPWIKLQRPDARLIQTADKKNNWTFTLAES 147 Query: 126 --QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 KS + L+ I G+I+ D + + L + I Sbjct: 148 DKDEKSAAPSAWSFRLDNILFDQGQIRYRDAVNRADVTVQVNALGKPVPYAQIAGGDDQQ 207 Query: 184 SIKGSVI--AEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 G + + +G ++N++ +++ IQ + + G L Sbjct: 208 KGAGDFVFGWKASGTYNNEKLTGDGKIGGMLSLRSQNTPFPIQADVRNGSTRVQVTGGLQ 267 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYK 289 + AGD L L F G V R ++ Sbjct: 268 DPMNLGGLNVRLRFAGDTLANLYGLTGVLLPDTPPYETDGHLIAKFNGEKGAVYRYEKFN 327 Query: 290 LQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 + +Q L + + K ++ K Sbjct: 328 GHIGDSD----IHGSLIYTQGKPRPTLTGELTSEQLRMADLGPLIGVDSGKGSEKTAQAK 383 Query: 349 DDIQYSVNKKEEKDNSHDKENQEN 372 N+ ++ HDK +N Sbjct: 384 ARRGEKSNQPADRVLPHDKFETKN 407 >gi|192292997|ref|YP_001993602.1| AsmA family protein [Rhodopseudomonas palustris TIE-1] gi|192286746|gb|ACF03127.1| AsmA family protein [Rhodopseudomonas palustris TIE-1] Length = 648 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 114/342 (33%), Gaps = 32/342 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R+ + + L + + GAF + L ID R+ E+Q G ++ V G I + I P Sbjct: 5 IKRLGVSVAVLIAAAVTGAFALSLTIDRGALRQAVEQQLRAATGLQLVVDGDIDVTIFPR 64 Query: 62 PSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 +V F ++R+ E G ++ L LPLL + D+ ++QP ++ + Sbjct: 65 STVTFSNVRLKSDEDGGGDAALSVKTLITNLRLLPLLLRRFEIADVMLNQPSIHVVRDAG 124 Query: 120 GVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 G SNW R + V +I ++ G + D+ + + D++L ++ Sbjct: 125 GRSNWTPFIDSLTRTMKPGLDDQVSFSEIRLQDGELSYRDETAGVQEHIDDIDLSLAWPS 184 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 ++ + G G D + A I L++ P+ I Sbjct: 185 ISRTF-----AATGQFDFRGE-RLDGSITVADFIAALRGDTSGIKLRLA----GAPMKIA 234 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRI 285 G + N+ G S + + L + ++ + Sbjct: 235 FDGTIA-NKTSLSLIGTVSADSASLRNALRWAGQEPPGTGGFGRFALKARANLIGASIAL 293 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQ-DEENLLNFSENGAESMH 326 + ++ + + L + Sbjct: 294 TNVNVEL----DKNVAEGVMTYTLAGGHQGLQATLAAGSIDV 331 >gi|331012117|gb|EGH92173.1| AsmA family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 741 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 46/434 (10%), Positives = 122/434 (28%), Gaps = 77/434 (17%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + D + + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120 Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAVASTETSGETTPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204 D + + + L P+ + + ++ G D + Sbjct: 181 DARKGRTFMAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240 Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN-------------------- 241 + + + + K F +++DL N+ Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWKSLKVSANQLRALGELRARD 300 Query: 242 -EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290 +K P SG S+A + + +S + ++ + L Sbjct: 301 LDKTPQISGGLSIAQLDLRTFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348 + + + V + L G D EE + K + +++ Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARKSEVQS 416 Query: 349 DDIQYSVNKKEEKD 362 + + + Sbjct: 417 GEAAAAAGDSPLPE 430 >gi|320331776|gb|EFW87714.1| AsmA family protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 741 Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + D + + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLALHR 120 Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAVATTAAPGEPAPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204 D + + + L P+ + + ++ G D + Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240 Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244 + + + + K F +++DL N+ Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300 Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290 P SG S+A + + +S + ++ + L Sbjct: 301 LDKTPQISGGLSIAQLDLRTFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348 + + + V + L G D EE + K + +++ Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARKSEVQS 416 Query: 349 DDIQYSVNKKEEKD 362 + + + Sbjct: 417 GEAAAAAGDSPLPE 430 >gi|71735454|ref|YP_277019.1| AsmA family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556007|gb|AAZ35218.1| AsmA family superfamily [Pseudomonas syringae pv. phaseolicola 1448A] Length = 741 Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + D + + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLALHR 120 Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAVATTAAPGEPAPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204 D + + + L P+ + + ++ G D + Sbjct: 181 DARKGRTFTAESIQLSTGPIRETSDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240 Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244 + + + + K F +++DL N+ Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300 Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290 P SG S+A + + +S + ++ + L Sbjct: 301 LDKTPQISGGLSIAQLDLRTFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348 + + + V + L G D EE + K + +++ Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARKSEVQS 416 Query: 349 DDIQYSVNKKEEKD 362 + + + Sbjct: 417 GEAAAAAGDSPLPE 430 >gi|108755245|emb|CAK32565.1| AsmA protein [uncultured organism] Length = 684 Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 100/330 (30%), Gaps = 35/330 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FE 80 + +D+ + R E +A G+++ + G I + I P++ +D+R GS Sbjct: 26 ILSTMDFEELRGIIEAEAKEATGRELKIAGPIDLKISLTPAIAVEDVRFANAAWGSRADM 85 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF----------QRKST 130 I + LPLLSG+I+V + + +P + +G NW ++ Sbjct: 86 ISIRRFELEVALLPLLSGDIQVKRLVLIEPDILLETDQEGRGNWQMTGAAETGEKDGEAE 145 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + +++ ++ + + ++ + L L+ A S + Sbjct: 146 GEDAPLPSFDQVVIRDATLTYKNGKTGEEIRLRLARLEGRA-----------ASSSSPLE 194 Query: 191 AEGTGNFDNKRSAFKITANFP-AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 G +++ + T ++L A + + G + Sbjct: 195 VALEGAYNDAPFKVEGTLGSFEQLLGEGPFPVKLSVEAGGATVTVDGRIAEPMTGRGLDL 254 Query: 250 VFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 V G L A+ LS +++ + + Sbjct: 255 KIQVRGQSLADLGALGGAELPPLGPYDLSVQVVQEGTTYKLTGLTAKVGSSD----IAGN 310 Query: 305 TKVSQDEE-NLLNFSENGAESMH-DLNETD 332 V+ +N + D D Sbjct: 311 ATVAFGGARPAVNGAFTAGTLNIQDFTPPD 340 >gi|298489307|ref|ZP_07007322.1| A/G-specific adenine glycosylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156158|gb|EFH97263.1| A/G-specific adenine glycosylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 741 Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + D + + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLALHR 120 Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAVATTAAPGEPTPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204 D + + + L P+ + + ++ G D + Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240 Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244 + + + + K F +++DL N+ Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300 Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290 P SG S+A + + +S + ++ + L Sbjct: 301 LDKTPQISGGLSIAQLDLRTFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348 + + + V + L G D EE + K + +++ Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARKSEVQS 416 Query: 349 DDIQYSVNKKEEKD 362 + + + Sbjct: 417 GEAAAAAGDSPLPE 430 >gi|289624102|ref|ZP_06457056.1| AsmA family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] Length = 741 Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + D + + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLALHR 120 Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAVATTAAPGEPTPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204 D + + + L P+ + + ++ G D + Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240 Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244 + + + + K F +++DL N+ Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300 Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290 P SG S+A + + +S + ++ + L Sbjct: 301 LDKTPQISGGLSIAQLDLRTFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348 + + + V + L G D EE + K + +++ Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARKSEVQS 416 Query: 349 DDIQYSVNKKEEKD 362 + + + Sbjct: 417 GEAAAAAGDSPLPE 430 >gi|220920739|ref|YP_002496040.1| hypothetical protein Mnod_0705 [Methylobacterium nodulans ORS 2060] gi|219945345|gb|ACL55737.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 1174 Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 98/334 (29%), Gaps = 27/334 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R +L L L ++LV A VP F++W R + +G + G ++I LP Sbjct: 1 MRDILTALAGLVILILVAALVVPPFVNWEGQRAAVDAALARSLGVEARSDGRLEIRFLPS 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P + + + + G + PLLSGEIR + I + + ++ G Sbjct: 61 PRLRIDHLVLGRP--GRPALDARFVKAEIALTPLLSGEIRFTETKIGRAEVTVPVTEGGA 118 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 ++ +E + V + + + L+ Sbjct: 119 LIVPPDFGAALGGRDLAVEDLRVSQLLFTTLVPATGRTDQFY-----------AESVRLA 167 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + G EG F++ P A+ +K+ P +++ + Sbjct: 168 APRLAGPWRVEGDAG----ALPFRLVTGAPTAVGAVPVKVTAGGDTAP-KLEIDARVSLA 222 Query: 242 EK-----QPIYSGVFSVA---GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 P +G + + L G+FK L+ Sbjct: 223 GDPARGFAPEATGTARLVVGPPPRPEGAQAAGPMTPFSLQGSFKARGRVAAFEGLTLEVE 282 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + + N + + D Sbjct: 283 GGGAPLRLSGRGTLDLPSLNA-ALALDARRLDLD 315 >gi|46579228|ref|YP_010036.1| AsmA family protein [Desulfovibrio vulgaris str. Hildenborough] gi|46448642|gb|AAS95295.1| AsmA family protein [Desulfovibrio vulgaris str. Hildenborough] gi|311233059|gb|ADP85913.1| AsmA family protein [Desulfovibrio vulgaris RCH1] Length = 701 Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 50/390 (12%), Positives = 112/390 (28%), Gaps = 67/390 (17%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 ++R L + +++L L D R + G+ +++ G + + + P Sbjct: 4 LMRFALFTFAAIIAIILFVVMAARLAFDPEALRNRAATALAEVTGRSVSISGPVTLGLWP 63 Query: 61 FPSVFFKDIRIDQKEDG---SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 +V F+ + + E S I +PL S + + ++ H+N Sbjct: 64 RLAVDFEGLAVAPPEGFADASPLLTIGKADASLRIIPLFSRRMEFDHIRLEGLHINLVRD 123 Query: 118 SKGVSNW--------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD 157 + G NW L+++ + + + D + Sbjct: 124 ADGNGNWTPPAGRPIPPPVPSEKDSGATPSAMPDVPRPAFSLQRLELADATLSLRDIATG 183 Query: 158 QVYFLSDLNLQISARFLNIISPLSIDSIKG---------------SVIAEGTGNFDNKRS 202 + D++ + + G + A+G+ + + Sbjct: 184 ESIRARDIDFVADFDAEGKAAVGLSLVLAGERPTFSTGLALDATVTPRADGSVSLELAPL 243 Query: 203 AFKITAN-FPAKNKAISLKIQLFPLAY----PIIIDLFG-NLFWNEKQPIYSGVFSVAGD 256 A + PA L+ +L + P + + G NL G S A + Sbjct: 244 AITPHSGVIPAAVGQTQLRGRLNIIPAKEGQPARLTIEGMNLTAPFMTATVDGSLSAARE 303 Query: 257 FSKLLNLELS-------------------AKKSRLSGNFKISDGNVRISRYKLQSILPNS 297 S LE S K+ G+ ++ +++S + Sbjct: 304 ASLSFALEGSPRKGLAAFGILLDTRATDALDKATAKGDVNVAGQKLQLSGMDARI----D 359 Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHD 327 ST + + + + + D Sbjct: 360 STTFKGDVLIPLSGDTPVKGTVALGDIDID 389 >gi|157375122|ref|YP_001473722.1| AsmA family protein [Shewanella sediminis HAW-EB3] gi|157317496|gb|ABV36594.1| AsmA family protein [Shewanella sediminis HAW-EB3] Length = 611 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 35/337 (10%), Positives = 102/337 (30%), Gaps = 27/337 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + F +++ A + L D DF+ G+ + V + P Sbjct: 5 MKILKWFFVVFFILIISLAAYLTLVFDPNDFKPQLVDAVKENTGRDLVVADKLSWTFFPS 64 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + ++ + +PL S ++ + + +D +N Sbjct: 65 IGIKLSKVSLSNPSGFDTSSMLEVNEIVAEVALMPLFSKQVEIAQLNVDGLTVNLETRID 124 Query: 120 GVSNWF--------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 G +++ + + + + + + +I+++D+++ + Sbjct: 125 GQTSFDGLEGSKSAGKPAAEPSSQSGKGLAGLNIGGVAITNTQIRMLDEKTGTEQLFNLE 184 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLKIQLF 224 L + L +PL + + + + + A K ++ Sbjct: 185 KLTLGQFALGEFAPLEYQFNAELPDMTLSSHGEGLIKVDASMQAIELKDLKILNSVAGEG 244 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA----KKSRLSGNFKISD 280 + I L + + E+S K + G Sbjct: 245 IPNKKLDISLLTQVSIALDKKRLKLSLEEFIADQIEAKGEVSVAYGGKVPNIDGQLSF-- 302 Query: 281 GNVRISRYKLQSILPNSSTDEDNK-TKVSQDEENLLN 316 G + + ++ ++ + D+K T+ + +E L+ Sbjct: 303 GEIDLDKF---MPPSDAPSQSDDKQTQATSAQEPDLS 336 >gi|331014648|gb|EGH94704.1| hypothetical protein PLA106_02055 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 688 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 41/380 (10%), Positives = 98/380 (25%), Gaps = 43/380 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57 R++ G +VL V + DW + + + + + A+ G + + Sbjct: 5 RKIFAWTGTTLLLVLAVLVIVIVTFDWNRIKPTLNEKVSGALHRPFAINGDLDVRWTREP 64 Query: 58 -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P P D+ + ++ + R LPLL ++ + + + Sbjct: 65 ELGGWRAWVPSPHFVADDLTLGNPGWSKTPQMFNLKHVEFRLSLLPLLVQQVVIPRIDLT 124 Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 P + G +NW + + + I G + DQ + + Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVIDIGAIKFDKGLVSFNDQTLNANLDVV 184 Query: 164 --------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAK 213 + + ++ + G + ++ + K Sbjct: 185 IDMLGKPIPFSEIVGSKEAQKAQEKGAVPQDYAFGLAVKGQYHGQKLSGTGKIGGLLALK 244 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + + +Q + G L + ++G L Sbjct: 245 DASQPFPVQADVKIGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDSP 304 Query: 271 ------RLSGNF-KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENGA 322 RL + N R + + + D ++ L+ + Sbjct: 305 AYSTDGRLVAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYLASQPRPKLSGVLVSNQ 361 Query: 323 ESMHDLNETDFFEEEEKKNK 342 DL + + K Sbjct: 362 LLFSDLAPLIGADSNAAQKK 381 >gi|83953521|ref|ZP_00962243.1| AsmA family protein [Sulfitobacter sp. NAS-14.1] gi|83842489|gb|EAP81657.1| AsmA family protein [Sulfitobacter sp. NAS-14.1] Length = 647 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 29/387 (7%), Positives = 103/387 (26%), Gaps = 26/387 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ ++ +G L +++V ++ + Q + G+++ + G + + P Sbjct: 1 MKWIIRAIGILLLILVVAVGSL-FLLPADRIARIAADQLRNLTGREVTITGDVGLTFWPV 59 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V + + + ++ + + L+ GEI++ ++ P + Sbjct: 60 LGVTAGGLEVGNADWAKDGAMLSAANAAIGVDAMALIRGEIKITNIEAQSPTIRLEQRRD 119 Query: 120 GVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 G ++W + + ++++ + + D E + ++L Sbjct: 120 GRASWQFSDGGGEAAIETAPTAPARSPRPLTIQRLDITDATLIY-DAEGSDLVRFDGVDL 178 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 + + + + + F N + + + ++ Sbjct: 179 SLDWPERAGDAVIKAALRPAADRVSIEATIN----RFDQFLNGDIRPLRARVDTKGGGVS 234 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-LSGNFKIS-DGNVRI 285 L G + + +A + L K+ ++ + ++ D + + Sbjct: 235 LTGRAGLAGAVAGDLWLKTSDTGRFLAALGVGDIALPQGLGKTADINLDLTLTPDRRLAL 294 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ + +N N + Sbjct: 295 REVVADLG----GNALTGAADITLNGTPDVNAQINVGALDLTGFAGSAPSGTAPASTTPA 350 Query: 346 LKKDDIQYSVNKKEEKDNSHDKENQEN 372 ++ + E Sbjct: 351 PASPTGWSKAPIDASALSAFNGEVALR 377 >gi|28872453|ref|NP_795072.1| hypothetical protein PSPTO_5341 [Pseudomonas syringae pv. tomato str. DC3000] gi|28855708|gb|AAO58767.1| conserved protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] Length = 741 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 44/434 (10%), Positives = 119/434 (27%), Gaps = 77/434 (17%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLDGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + + + + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELHEAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120 Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAVATTGTPGEATPAPAPDAAKPDRPSQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204 D + + + L P+ + + ++ G D + Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRTKTELVGQLRMDRVLKRY 240 Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244 + + + + K+ F +++DL N+ Sbjct: 241 QFEDMRLSGEVAGEPLQGKLVTFSAQGQLLVDLTANIAEWNSLKISANQLRALGELRARD 300 Query: 245 ----PIYSGVFSVAGDFSKL----------LNLELSAKKSRLSGNFKISDGNVRISRYKL 290 P SG S+A + E + K + + ++ + L Sbjct: 301 LDKTPQISGGLSIASLDLRAFFENIGQPLPAMAEGALSKVEMVTRLSGTPTSLALENLNL 360 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348 + + + V L D EE + K + +++ Sbjct: 361 KV----DDSTFTGRIAVDDFARQALRVQLKADTFDADRYRPAESEESKGAKAARKSEVQS 416 Query: 349 DDIQYSVNKKEEKD 362 + + Sbjct: 417 GEAAAVAGDSPLPE 430 >gi|330967498|gb|EGH67758.1| AsmA family protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 741 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 44/434 (10%), Positives = 119/434 (27%), Gaps = 77/434 (17%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLDGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + + + + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELHEAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120 Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAVATTGTPGEATPAPAPDAAKPDRPSQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204 D + + + L P+ + + ++ G D + Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRTKTELVGQLRMDRVLKRY 240 Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244 + + + + K+ F +++DL N+ Sbjct: 241 QFEDMRLSGEVAGEPLQGKLVTFSAQGQLLVDLTANIAEWNSLKISANQLRALGELRARD 300 Query: 245 ----PIYSGVFSVAGDFSKL----------LNLELSAKKSRLSGNFKISDGNVRISRYKL 290 P SG S+A + E + K + + ++ + L Sbjct: 301 LDKTPQISGGLSIAPLDLRAFFENIGQPLPAMAEGALSKVEMVTRLSGTPTSLALENLNL 360 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348 + + + V L D EE + K + +++ Sbjct: 361 KV----DDSTFTGRIAVDDFARQALRVQLKADTFDVDRYRPAESEESKGAKAARKSEVQS 416 Query: 349 DDIQYSVNKKEEKD 362 + + Sbjct: 417 GEAAAVAGDSPLPE 430 >gi|302187482|ref|ZP_07264155.1| AsmA family protein [Pseudomonas syringae pv. syringae 642] Length = 741 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + D + + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120 Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAVASTETPGEPTPAPAPDAPKTDRPSQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204 D + + + L P+ + + ++ G D + Sbjct: 181 DARKGRTFMAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240 Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244 + + + + K F +++DL N+ Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300 Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290 P SG S+A + + +S + ++ + L Sbjct: 301 LDKTPQISGGLSIAQLDLRAFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALDNLNL 360 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348 + + + V + L G D EE + K + +++ Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKSAKAARKSEVQS 416 Query: 349 DDIQYSVNKKEEKD 362 + + + Sbjct: 417 GEAAAAAGDSPLPE 430 >gi|237808080|ref|YP_002892520.1| AsmA family protein [Tolumonas auensis DSM 9187] gi|237500341|gb|ACQ92934.1| AsmA family protein [Tolumonas auensis DSM 9187] Length = 751 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 54/346 (15%), Positives = 111/346 (32%), Gaps = 30/346 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 + L +G + +++ GA V D + E + + G + + + P P Sbjct: 6 KYSLYSVGAVVALIAGGAVYVTATFDANSLKPRLESLVKAEKQRTLKFNGPLSLSLFPKP 65 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + D+ + ++ + + I + +F PLLS +I + ++ + +N + G Sbjct: 66 GITVSDVSLSERNSDTQFAHITDARLVMQFWPLLSKKIVIDEVDVQGATINLLRNKTGQY 125 Query: 123 NWFQRKST----------------------MDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 N+ L + ++ IK +DQ+S Q Sbjct: 126 NFADLMENGKKSAIKETIPEIATDSETTTGASPATGFRLSQFNIAKSSIKYVDQQSGQQL 185 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 LSDL+L + + S S + K NF K + L Sbjct: 186 MLSDLSLFGDGITVAGAEHIDFSSRLQSPSPALDLRINTKL----DRLNFDQKTGQLLLD 241 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280 + D L P + A + +++ LS ++ NFK+ Sbjct: 242 GLHNVVDGKADKDA---LKLTLTAPKLFIKDNAATADTMVISALLSGAARKVDANFKLDG 298 Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + ++K +++ + T V + +NF Sbjct: 299 VSGDSQQFKARALKLDL-TANQGDQAVKMAVNSPVNFKLATQTLNL 343 >gi|332750204|gb|EGJ80615.1| asmA family protein [Shigella flexneri 4343-70] Length = 671 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 49/392 (12%), Positives = 110/392 (28%), Gaps = 38/392 (9%) Query: 15 VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFP 62 +++V A + DW + ++ + + + A++G + + +P+P Sbjct: 2 LLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGNLGVVWERQKQETGWRSWVPWP 61 Query: 63 SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 V +DI + D + + L LL+ + + + +++P S+ Sbjct: 62 HVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEKPDARLIRLSEK 121 Query: 121 VSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 +NW + + L+ I GRI I D+ S + L Sbjct: 122 NNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLP 181 Query: 173 FLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPL 226 F + + + G ++ + + + +Q Sbjct: 182 FSEVTGSKGKADKEKVGDYIFGLKAQGRYNGEPLTGTGKIGGMLALRGEGTPFPVQADFR 241 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNF--KIS 279 + + G + K +GD L G KI Sbjct: 242 SGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKID 301 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-DLNETDFFEEEE 338 + Y+ + S + + L + DL + + Sbjct: 302 TEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGK 361 Query: 339 K--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 K+K + KK + K + + + Sbjct: 362 GAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 393 >gi|261342004|ref|ZP_05969862.1| AsmA family protein [Enterobacter cancerogenus ATCC 35316] gi|288315920|gb|EFC54858.1| AsmA family protein [Enterobacter cancerogenus ATCC 35316] Length = 680 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 50/385 (12%), Positives = 105/385 (27%), Gaps = 43/385 (11%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 RV+ +F +++V A + DW + ++ + + + A++G + + Sbjct: 6 RVIAWTAGIFLLLIVVAIIIIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKE 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V DI + D + + L LL+ + + + + Q Sbjct: 66 ETGWRSWVPWPHVHADDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVYLPWIKLQQ 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLASSEEKDPNAQPSAWSFRLDNILFDRGRIAIDDKVSKADVE 185 Query: 162 LSDLNLQISARFLNIISP----LSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L F + + G ++ + K +++ Sbjct: 186 ILVDPLGKPLPFSEVTGSKAKGDKAKAGDYVFGLTAKGRYNGQPLTGKGKIGGMLALRSE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS----- 270 +Q + + G + K AGD L Sbjct: 246 GTPFPVQADFRSGNTRVAFVGTVNDPMKMGGVDLQLKFAGDSLGELYDLTGVLLPDTPPF 305 Query: 271 ----RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES 324 L +V + + + + L + Sbjct: 306 ETDGHLVAKIDTEKSSVFDYRDFNGRIGDSD----IHGSLTYTTGKPRPKLEGDMESRQL 361 Query: 325 MHDLNETDFFEEEEKKNKNDDLKKD 349 + K K+ ++KKD Sbjct: 362 RLADLGPLIGVDSGKGTKSKEVKKD 386 >gi|188535491|ref|YP_001909288.1| Conserved hypothetical protein YhjG [Erwinia tasmaniensis Et1/99] gi|188030533|emb|CAO98428.1| Conserved hypothetical protein YhjG [Erwinia tasmaniensis Et1/99] Length = 685 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 53/412 (12%), Positives = 123/412 (29%), Gaps = 42/412 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 +V+ +G +F +++V V + DW + R+ + + + A++G + ++ Sbjct: 6 KVIGSIGGIFLLLVVVIVAVVAWFDWNRLKPTLNRKVSTEINRPFAIRGDLGVNWQRNRT 65 Query: 58 ------ILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + + +E + L LLS +I + + + Q Sbjct: 66 EPGWRGWVPWPQVHAEDIMLGNPPNVPDVTMIHLERIDATISPLALLSQQIYLPWIKLQQ 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQV 159 + ++ G +NW + S + L+ + G I D ++D Sbjct: 126 LQVKLVQNADGKNNWTFDLADSDGEKASQAPSAWSFRLDNVAFDRGTISYRDAINKADVQ 185 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAI 217 + L + L + +G ++N++ + +++ Sbjct: 186 VVVDPLGKPVPYAQLAGGDDKQKGAADFVFGWRASGTYNNEKLTGEGKIGGMLSLRSQNT 245 Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS------- 270 + + + G + +GD L Sbjct: 246 PFPVAADVRNGTTRVRVAGTVQDPMDLGGMDLRLRFSGDTLANLYGLTGVLLPDTPPYET 305 Query: 271 --RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES-MH 326 L+ F+ G V + + D L S + M Sbjct: 306 DGHLTARFQQPGGAVFHYKNFNGHIGDSDIRGSL---AYAQGDRRPKLEGSLESLQLRMA 362 Query: 327 DLNETDFFEEEEKKNKNDDLK--KDDIQYSVNKKEEKDNSHDKENQENFSGD 376 DL + K K + + + ++ D ++ + D Sbjct: 363 DLGPLIGVNSGKDSAKTARAKAQRGEKSMQPAGRVLPHDTFDTQSWQAMDAD 414 >gi|315618445|gb|EFU99032.1| asmA family protein [Escherichia coli 3431] Length = 669 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 49/390 (12%), Positives = 107/390 (27%), Gaps = 38/390 (9%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSV 64 +V A + DW + ++ + + + A++G + + +P+P V Sbjct: 2 IVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHV 61 Query: 65 FFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 +DI + D + + L LL+ + + + +++P S+ + Sbjct: 62 HAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEKPDARLIRLSEKNN 121 Query: 123 NWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLNLQIS 170 NW + + L+ I GRI I D+ S + L S Sbjct: 122 NWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFS 181 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAY 228 + + G ++ + + + +Q + Sbjct: 182 EVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGEGTPFPVQADFRSG 241 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNF--KISDG 281 + G + K +GD L G KI Sbjct: 242 NTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKIDTE 301 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-DLNETDFFEEEEK- 339 + Y+ + S + + L + DL + + Sbjct: 302 KSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGA 361 Query: 340 -KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 K+K + KK + K + + + Sbjct: 362 EKSKRSEQKKGEKSVQPAGKVLPYDRFETD 391 >gi|330874226|gb|EGH08375.1| AsmA family protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 741 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLDGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + + R+ + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELHEARVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120 Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAVATTGTPGEATPAPAPDAAKPDRPSQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204 D + + + L P+ + + ++ G D + Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRTKTELVGQLRMDRVLKRY 240 Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244 + + + + K+ F +++DL N+ Sbjct: 241 QFEDMRLSGEVAGEPLQGKLVTFSAQGQLLVDLTANIAEWNSLKISANQLRALGELRARD 300 Query: 245 ----PIYSGVFSVAGDFSKL----------LNLELSAKKSRLSGNFKISDGNVRISRYKL 290 P SG S+A + E + K + + ++ + L Sbjct: 301 LDKTPQISGGLSIAPLDLRAFFENIGQPLPAMAEGALSKVEMVTRLSGTPTSLALENLNL 360 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348 + + + V L D EE + K + +++ Sbjct: 361 KV----DDSTFTGRIAVDDFARQALRVQLKADTFDADRYRPAESEESKGAKAARKSEVQS 416 Query: 349 DDIQYSVNKKEEKD 362 + + Sbjct: 417 GEAAAVAGDSPLPE 430 >gi|330987175|gb|EGH85278.1| AsmA family protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 741 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 45/434 (10%), Positives = 119/434 (27%), Gaps = 77/434 (17%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + D + + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLALHR 120 Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAVATTTAPGEPTPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204 D + + + L P+ + + ++ G D + Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240 Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244 + + + + K F ++ DL N+ Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLADLAANIAEWNSLKVSANQLRALGELRARD 300 Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290 P SG S+A + + +S + ++ + L Sbjct: 301 LDKTPQISGGLSIAQLDLRTFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348 + + + V + L G D EE + K + +++ Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGVKAARKSEVQS 416 Query: 349 DDIQYSVNKKEEKD 362 + + + Sbjct: 417 GEAAAAAGDSPLPE 430 >gi|329909968|ref|ZP_08275156.1| hypothetical protein IMCC9480_7 [Oxalobacteraceae bacterium IMCC9480] gi|327546352|gb|EGF31368.1| hypothetical protein IMCC9480_7 [Oxalobacteraceae bacterium IMCC9480] Length = 671 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 44/350 (12%), Positives = 103/350 (29%), Gaps = 34/350 (9%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHI------------LPFPSVFFKDIRIDQK 74 DW R + + +G+ A++G + + LP+P + D+ I Sbjct: 29 WDWNRSRPWLNDKVSQAIGRDFAIRGQLGLSWHRPPGGTGWRGYLPWPRLTASDVVIGNP 88 Query: 75 EDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST-M 131 + ++ + LPLL +I + + + P ++ + G NW + Sbjct: 89 VWARQPALASLDRIEFDIALLPLLRQQIAIPSIALVNPAIDLERRADGSVNWSFAPQSAS 148 Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS--- 188 + LE+I+ G I + D + ++ ++ + +A + + + + G Sbjct: 149 SSAWTLKLERINFASGTIALTD-QLKKIDAIATIRPAGNAVEVGALLDKNAPAGAGPAYG 207 Query: 189 --VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 GT N + + + + +Q I + G + Sbjct: 208 FAFDIAGTYNKAVVKGNGRFGGVLSLVDASQPFPLQTDLRVGDNHIVIDGTITDPGNLAA 267 Query: 247 YSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNS 297 +A L L+G + +D R ++ + + Sbjct: 268 LDLQLQLASGSMAHLYELTGVALPDTPPFSTSGHLTGRLRKADSLFRYEKFSGKVGGSDL 327 Query: 298 STDEDNKTKVSQDEENLLNFSENG-AESMHDLNETDFFEEEEKKNKNDDL 346 + + + L DL + + + L Sbjct: 328 AGTLE---YSTAGARPKLVGDLRSERLLFADLAPLVGASKTDAPPADVKL 374 >gi|330970724|gb|EGH70790.1| AsmA family protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 741 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + D + + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120 Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAVASTETPGETTPAPAPDAPKADRPAQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204 D + + + L P+ + + ++ G D + Sbjct: 181 DARKGRTFMAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240 Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244 + + + + K F +++DL N+ Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300 Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290 P SG S+A + + +S + ++ + L Sbjct: 301 LDKTPQISGGLSIAQLDLRAFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348 + + + V + L G D EE + K + +++ Sbjct: 361 KV----DDSSFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARKSEVQS 416 Query: 349 DDIQYSVNKKEEKD 362 + + + Sbjct: 417 GEAAAAAGDSPLPE 430 >gi|312958437|ref|ZP_07772957.1| hypothetical protein PFWH6_0333 [Pseudomonas fluorescens WH6] gi|311286980|gb|EFQ65541.1| hypothetical protein PFWH6_0333 [Pseudomonas fluorescens WH6] Length = 738 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 53/389 (13%), Positives = 112/389 (28%), Gaps = 72/389 (18%) Query: 18 VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KED 76 F + D D++E+ + A ++ + G I + P+ + + + Sbjct: 21 ALGFALTHLFDPNDYKEEIRQIARDKAHIELTLNGDIGWSLFPWLGLELHEASVATLTAP 80 Query: 77 GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---------- 126 + ++ L + LPLL E+++ D+ ++ +L +G NW Sbjct: 81 TQPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLRLTRDKQGHGNWEDIGKNVPDATA 140 Query: 127 --------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + ++ + + RI+ D+++ + + + L A Sbjct: 141 GAPAAAPAEPVAETKPEKPAQPIRLDIDSLTINNARIEYNDEQTGKQFSAESIQLSAGAV 200 Query: 173 FLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAFKI---TANFPAKNKAISLKI 221 P+ + + GS G ++ + A + + K Sbjct: 201 HEGASIPVKLTAFFGSNQPVMRVKTELNGNLRIQRALKRYQFEDMRISGEATGEPLQGKT 260 Query: 222 QLFPLAYPIIIDLFGNLFWN---------------------EKQPIYSGVFSVAGDFSKL 260 F +++D N+ +K P SG S+A Sbjct: 261 VTFSTQGQLLVDQAANIAEWTNMKLSANQLRALGELKVNDLDKTPQLSGALSIAQFDLAK 320 Query: 261 ----------LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD 310 E S K L K + +V + L+ + + V Sbjct: 321 FLDSIGSPLPPMAEGSLSKVELVSRLKGTPTSVALEDLNLKL----DGSTFTGRVAVDDF 376 Query: 311 EENLLNFSENGAESMHDLNETDFFEEEEK 339 + L G D N E K Sbjct: 377 AKQSLRVQLKGDTFNAD-NYLPAQSESAK 404 >gi|188577324|ref|YP_001914253.1| AsmA family membrane protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521776|gb|ACD59721.1| AsmA family membrane protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 342 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 84/243 (34%), Gaps = 15/243 (6%) Query: 33 REDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRA 90 R ER T G++ + G + + + +V + + + +++ + Sbjct: 2 RGPVERAVTAKTGREFHL-GHLDVDLGRITTVRGERLSLGNASWSKRGAMAELNAAEIDV 60 Query: 91 EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIK 150 E PLL G++R+ ++ ++ P L + + + L ++ V GR++ Sbjct: 61 ELWPLLRGKLRLPEIRLEHPTLLLEAGNDSHPGNWVFDQSYSDSSMPRLGRLLVNNGRLQ 120 Query: 151 IIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF 210 ID S + +N ++P S D + +G G + A K Sbjct: 121 YIDDASRSDVDV----------AINSLAPPSSDQRAAPISIDGKGRWKGYPFALKGNTAS 170 Query: 211 PAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268 P + +I L A + G L + ++ +++G L L S Sbjct: 171 PLELSQSEHPFRIDLRGSAGATRTHVRGTLTNPFQLRVFDLQMALSGQDMADLYLLASQY 230 Query: 269 KSR 271 Sbjct: 231 HPH 233 >gi|167619860|ref|ZP_02388491.1| AsmA family protein [Burkholderia thailandensis Bt4] Length = 818 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 77/239 (32%), Gaps = 35/239 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + + +V+ DW + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIAAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P + I + ++ LPLL+ E+ + + + Sbjct: 67 DGETRWRAWVPWPMFSASQVVIGNPPWAKAPNFATLDEARFELALLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P L+ + G +NW ++S+ V L G + D ++ Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSSGPSPWKVQLRDFGFAKGTVAYRDA-------ITKA 179 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 +L ++ L PL G + ++ +A K A L + Sbjct: 180 DLTVAVDTLGQPIPL------------GDVLRQQEETSRAASAQRVGKKGAAQLTAKAN 226 >gi|83721138|ref|YP_442789.1| AsmA family protein [Burkholderia thailandensis E264] gi|257139001|ref|ZP_05587263.1| AsmA family protein [Burkholderia thailandensis E264] gi|83654963|gb|ABC39026.1| AsmA family protein [Burkholderia thailandensis E264] Length = 818 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 77/239 (32%), Gaps = 35/239 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + + +V+ DW + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIAAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P + I + ++ LPLL+ E+ + + + Sbjct: 67 DGETGWRAWVPWPMFSASQVVIGNPPWAKAPNFATLDEARFELALLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P L+ + G +NW ++S+ V L G + D ++ Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSSGPSPWKVQLRDFGFAKGTVAYRDA-------ITKA 179 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 +L ++ L PL G + ++ +A K A L + Sbjct: 180 DLTVAVDTLGQPIPL------------GDVLRQQEETSRAASAQRVGKKGAAQLTAKAN 226 >gi|66048124|ref|YP_237965.1| AsmA [Pseudomonas syringae pv. syringae B728a] gi|63258831|gb|AAY39927.1| AsmA [Pseudomonas syringae pv. syringae B728a] Length = 741 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + D + + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120 Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAVASTETPGETTPAAAPDAPKADRPAQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204 D + + + L P+ + + ++ G D + Sbjct: 181 DARKGRTFMAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240 Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244 + + + + K F +++DL N+ Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300 Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290 P SG S+A + + +S + ++ + L Sbjct: 301 LDKTPQISGGLSIAQLDLRAFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348 + + + V + L G D EE + K + +++ Sbjct: 361 KV----DDSSFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARKSEVQS 416 Query: 349 DDIQYSVNKKEEKD 362 + + + Sbjct: 417 GEAAAAAGDSPLPE 430 >gi|221212809|ref|ZP_03585785.1| AsmA family protein [Burkholderia multivorans CGD1] gi|221167022|gb|EED99492.1| AsmA family protein [Burkholderia multivorans CGD1] Length = 780 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 68/209 (32%), Gaps = 16/209 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH---- 57 + + + + ++++ + DW + + +G+ A+ G IK++ Sbjct: 28 IGKTAAWIVGIVAILIAATVVFIVTFDWNRAKPWINEHVSDALGRPFAINGDIKVNWRRP 87 Query: 58 --------ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+PS I I + + ++ LPLL+ I + + + Sbjct: 88 DGETGWRAWVPWPSFSATQIEIGNPDWAKSPRFATLDAAHFDLALLPLLAHRIVIPSIDV 147 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P ++ + G + W + +V L+ G + D + ++ Sbjct: 148 VNPAIDLERLADGRNTWTFQFKQSSQPSRWDVRLDNFGFAKGTVTYRDAITKADLTIAID 207 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194 L +++ S S G Sbjct: 208 TLGQPIPLGDVLKEQERTSRAASAQRVGK 236 >gi|289649382|ref|ZP_06480725.1| AsmA family protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 741 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + D + + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLALHR 120 Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAVATTAAPGEPTPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204 D + + + L P+ + + ++ G D + Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240 Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244 + + + + K F +++DL N+ Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300 Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290 P SG S+A + + +S + ++ + L Sbjct: 301 LDKTPQISGGLSIAQLDLRTFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348 + + + V + L G D EE + K + +++ Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFEADRYRPAESEESKGAKAARKSEVQS 416 Query: 349 DDIQYSVNKKEEKD 362 + + + Sbjct: 417 GEAAAAAGDSPLPE 430 >gi|167836440|ref|ZP_02463323.1| AsmA family protein [Burkholderia thailandensis MSMB43] Length = 848 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 80/241 (33%), Gaps = 35/241 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + +F+V+ DW+ + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIFAVLTAAVGVFIFTFDWSRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P + + I + ++ LPLL+ E+ + + + Sbjct: 67 DGETGWRAWVPWPMFSARQVVIGNPPWAKAPDFATLDEARFELALLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P L+ + G +NW ++S+ V L G + D ++ Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSSGPSPWKVQLRDFGFAKGTVAYRDA-------ITKA 179 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 +L ++ L PL G + ++ +A K A L + Sbjct: 180 DLSVAVDTLGQPIPL------------GDVLRQQEETSRAASAQRVGKKGAAQLTAKAKA 227 Query: 226 L 226 Sbjct: 228 Q 228 >gi|331017082|gb|EGH97138.1| AsmA family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 741 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 44/434 (10%), Positives = 119/434 (27%), Gaps = 77/434 (17%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLDGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + + + + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELHEAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120 Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAVATTGTPGEATPAPAPDAAKPDRPSQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204 D + + + L P+ + + ++ G D + Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRTKTELVGQLRMDRVLKRY 240 Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244 + + + + K+ F +++DL N+ Sbjct: 241 QFEDMRLSGEVAGEPLQGKLVTFSAQGQLLVDLTANIAEWNSLKISANQLRALGELRARD 300 Query: 245 ----PIYSGVFSVAGDFSKL----------LNLELSAKKSRLSGNFKISDGNVRISRYKL 290 P SG S+A + E + K + + ++ + L Sbjct: 301 LDKTPQISGGLSIASLDLRAFFENIGQPLPAMAEGALSKVEMVTRLSGTPTSLALENLNL 360 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348 + + + V L D EE + K + +++ Sbjct: 361 KV----DDSTFTGRIAVDDFARQALRVQLKADTFDADRYRPAESEESKGAKAARKSEVQS 416 Query: 349 DDIQYSVNKKEEKD 362 + + Sbjct: 417 GEAAAIAGDSPLPE 430 >gi|221198041|ref|ZP_03571087.1| AsmA family protein [Burkholderia multivorans CGD2M] gi|221204401|ref|ZP_03577418.1| AsmA family [Burkholderia multivorans CGD2] gi|221175258|gb|EEE07688.1| AsmA family [Burkholderia multivorans CGD2] gi|221181973|gb|EEE14374.1| AsmA family protein [Burkholderia multivorans CGD2M] Length = 780 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 67/209 (32%), Gaps = 16/209 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 + + + + ++++ + DW + + +G+ A+ G IK+ Sbjct: 28 IGKTAAWIVGIVAILIAATVVFIVTFDWNRAKPWINEHVSDALGRPFAINGDIKVDWRRP 87 Query: 57 -------HILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+PS I I + + ++ LPLL+ I + + + Sbjct: 88 DGETGWRAWVPWPSFSATQIEIGNPDWAKSPRFATLDAAHFDLALLPLLAHRIVIPSIDV 147 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P ++ + G + W + +V L+ G + D + ++ Sbjct: 148 VNPAIDLERLADGRNTWTFQFKQSSQPSRWDVRLDNFGFAKGTVTYRDAITKADLTIAID 207 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194 L +++ S S G Sbjct: 208 TLGQPIPLGDVLKEQERTSRAASAQRVGK 236 >gi|213971189|ref|ZP_03399307.1| AsmA protein [Pseudomonas syringae pv. tomato T1] gi|301382317|ref|ZP_07230735.1| AsmA family protein [Pseudomonas syringae pv. tomato Max13] gi|302058512|ref|ZP_07250053.1| AsmA family protein [Pseudomonas syringae pv. tomato K40] gi|302132179|ref|ZP_07258169.1| AsmA family protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924058|gb|EEB57635.1| AsmA protein [Pseudomonas syringae pv. tomato T1] Length = 741 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 44/434 (10%), Positives = 119/434 (27%), Gaps = 77/434 (17%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLDGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + + + + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELHEAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120 Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAVATTGTPGEATPAPAPDAAKPDRPSQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204 D + + + L P+ + + ++ G D + Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRTKTELVGQLRMDRVLKRY 240 Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244 + + + + K+ F +++DL N+ Sbjct: 241 QFEDMRLSGEVAGEPLQGKLVTFSAQGQLLVDLTANIAEWNSLKISANQLRALGELRARD 300 Query: 245 ----PIYSGVFSVAGDFSKL----------LNLELSAKKSRLSGNFKISDGNVRISRYKL 290 P SG S+A + E + K + + ++ + L Sbjct: 301 LDKTPQISGGLSIASLDLRAFFENIGQPLPAMAEGALSKVEMVTRLSGTPTSLALENLNL 360 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348 + + + V L D EE + K + +++ Sbjct: 361 KV----DDSTFTGRIAVDDFARQALRVQLKADTFDADRYRPAESEESKGAKAARKSEVQS 416 Query: 349 DDIQYSVNKKEEKD 362 + + Sbjct: 417 GEAAAIAGDSPLPE 430 >gi|92112654|ref|YP_572582.1| AsmA [Chromohalobacter salexigens DSM 3043] gi|91795744|gb|ABE57883.1| AsmA [Chromohalobacter salexigens DSM 3043] Length = 789 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 53/418 (12%), Positives = 117/418 (27%), Gaps = 48/418 (11%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +LR +L +G L +V+ + F D D + G + ++G + P Sbjct: 4 LLRALLAVVGVLALIVVGAVVYITTFFDPNDLKPRLVEAVREQSGLDLNLEGQLAWSFYP 63 Query: 61 FPSVFFKDIRI---DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 + +Q + + + E + F PLLSGE+ V + +D LN Sbjct: 64 RLGFSVEQAEAWLPEQPHEEAPFAAFERAEVSVAFAPLLSGEVAVEGLTLDGMRLNLERD 123 Query: 118 SKGVSNWF-------------------------QRKSTMDMIHNVILEKIHVKGGRIKII 152 ++G NW ++ + + + + V+ + Sbjct: 124 AQGRGNWQVLLDRLENGGDQAERALAPASAGPGLDQNADSLPVALDIASVQVRDSLVHYR 183 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSID--------SIKGSVIAEGTGNFDNKRSAF 204 D + LS L+L S + PL + ++ V + + Sbjct: 184 DAQRGLDLTLSGLSLDGSNVSPDAAFPLQMAFELERQAPALTSDVNFKSRVRLGLSDGRY 243 Query: 205 KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE 264 ++ + L A + + + G+L ++ Y + ++ Sbjct: 244 ELNKVTLETSTQWP---ALSEQAQGLNLQI-GHLLAETQRQHYRIDDARLNTRLHHPAVD 299 Query: 265 LSAKKSRL--SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK-VSQDEENLL--NFSE 319 L G + ++ L + D Sbjct: 300 GKPLGLSLGFDGEADLDAQTAQLRDIAL---SGDDDLDLTGTLSFTDLLGAPEYTGQLKL 356 Query: 320 NGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 + L + E ++ + ++ N + E F+G+ Sbjct: 357 SPLSLRDWLTRFEALPETGDDKALSEVAFTSPVHGDLERINFSNLSLLLDGETFTGEL 414 >gi|170751334|ref|YP_001757594.1| hypothetical protein Mrad2831_4952 [Methylobacterium radiotolerans JCM 2831] gi|170657856|gb|ACB26911.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM 2831] Length = 1146 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 99/328 (30%), Gaps = 19/328 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R +L L +VLV A VP F+DW R ER +G + G I++ +LP Sbjct: 1 MRDLLTALACAVILVLVAALAVPPFVDWQAHRGLVERALARSLGVPVRTDGRIEVRLLPS 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P + + + + + PLL GE R + I + + ++ Sbjct: 61 PRLRVDRLHL-GTDPDRPSLDARFVKAEIALAPLLKGEFRFTETRIGRAEIKLPVAGPDT 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 ++ +E + ++ + + + L +L++ A Sbjct: 120 LKLPPDFGGALRDRDLAIENLQIQQFLVTTQVPATGRTDQLYVQDLRLQAP--------- 170 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP-IIIDLF-GNLF 239 ++ G EGT F+ + P + ++ KI A P D G Sbjct: 171 --ALVGPWRIEGTSG----GIPFRAVSGTPGPDGRLAAKISGGGDAAPRFEADARFGLAP 224 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 S + L+G FK VR L + Sbjct: 225 AEAGGTQVEAEGSARLVVGPPTQAAGAYLPFSLAGTFKARGTQVRFEAIDLAIDPGGRAL 284 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHD 327 ++ + + + D Sbjct: 285 RLGGTGRLDLRQ-WRAGLTLDARRLDLD 311 >gi|114320936|ref|YP_742619.1| hypothetical protein Mlg_1785 [Alkalilimnicola ehrlichii MLHE-1] gi|114227330|gb|ABI57129.1| Uncharacterized protein involved in outer membrane biogenesis-like protein [Alkalilimnicola ehrlichii MLHE-1] Length = 470 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 99/283 (34%), Gaps = 11/283 (3%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDI 69 G L +V+++ + L E + +G ++++G + + P P+V D+ Sbjct: 5 GVLVAVLVLAGVALALLWPGERLGEQIAGEMEAQLGVPVSIEGDATLRLWPGPAVRVSDV 64 Query: 70 RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKS 129 + + D + + +LPLL G + + +D P LN + G N R++ Sbjct: 65 LLGPEPDADPVGHLAAARLSVRWLPLLRGRLEPGTLLLDTPVLNLERDAAGALNVDWRQA 124 Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS----PLSIDSI 185 + L+ + ++GG + D+ DQ + L + A + + PL+ ++ Sbjct: 125 EDADGRALALD-LRIRGGELHWRDEGQDQTVTVRGLEVDAPATEWRVAADDAQPLTRLAL 183 Query: 186 KGSVIAE----GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +V AE G FD+ + + + + D Sbjct: 184 GANVSAERVEVGVLGFDDVAFGLSARDGV-IRTEDWEMTLFGSRGTGEAEADFTEAPPHW 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + G + L ++ + L+ + + + Sbjct: 243 VLNVAF-GDLQLESFPEAWLPAGAASGSAELTASLTSQGEDAQ 284 >gi|332187019|ref|ZP_08388760.1| asmA family protein [Sphingomonas sp. S17] gi|332013029|gb|EGI55093.1| asmA family protein [Sphingomonas sp. S17] Length = 618 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 105/355 (29%), Gaps = 35/355 (9%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKI-HILPFPSVFFKDIRIDQKEDGS--FESKI 83 W R R+AT G+ + + ++ I P++ +D+RI Q + + Sbjct: 36 FPWGVLRGAVTREATARFGRPVTIGSVHRVDTIGFHPTIAIEDLRIPQAAWAGQGDFAGL 95 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIH 143 E +R PLL G+ D+ I L +G +NW + L+ + Sbjct: 96 ERAEIRFSVWPLLKGDFVPEDIRISGLRLALVRDKQGRTNWSRPGEPQQGGSASDLQGLV 155 Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203 V G + D + + + + AEG G Sbjct: 156 VTDGVVSYRDAKQGREALVR-----------------IAADPDHGLRAEGEGRIRGAPVT 198 Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL 263 + T P + + + ++ G + + + D K ++ Sbjct: 199 LRFT-GAPVRPGPWRFAAAITGDL--LTMNAQGTMDRPLDTDAMTLDLTARADDLKRIDA 255 Query: 264 ELSAK-----KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFS 318 + A +L + + + I+ + + + + V + E L Sbjct: 256 VIEAGLFRTRPVQLRAHVRHDNPRWTITDLRGRIGRSD----LTGRLTVDKKEGRTL-LD 310 Query: 319 ENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENF 373 + A D ++ E + + + + N + + + F Sbjct: 311 GDVAAGQLDFDDLS-SPEGRAEAAALERRIG-PRLVPNTRIDIGKIDTTDGTIRF 363 >gi|161524672|ref|YP_001579684.1| AsmA family protein [Burkholderia multivorans ATCC 17616] gi|189350571|ref|YP_001946199.1| hypothetical protein BMULJ_01743 [Burkholderia multivorans ATCC 17616] gi|160342101|gb|ABX15187.1| AsmA family protein [Burkholderia multivorans ATCC 17616] gi|189334593|dbj|BAG43663.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] Length = 759 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 68/209 (32%), Gaps = 16/209 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH---- 57 + + + + ++++ + DW + + +G+ A+ G IK++ Sbjct: 7 IGKTAAWIVGIVAILIAATVVFIVTFDWNRAKPWINEHVSDALGRPFAINGDIKVNWRRP 66 Query: 58 --------ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+PS I I + + ++ LPLL+ I + + + Sbjct: 67 DGETGWRAWVPWPSFSATQIEIGNPDWAKSPRFATLDAAHFDLALLPLLAHRIVIPSIDV 126 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P ++ + G + W + +V L+ G + D + ++ Sbjct: 127 VNPAIDLERLADGRNTWTFQFKQSSQPSRWDVQLDNFGFAKGTVTYRDAITKADLTIAID 186 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194 L +++ S S G Sbjct: 187 TLGQPIPLGDVLKEQERTSRAASAQRVGK 215 >gi|320326483|gb|EFW82535.1| AsmA family protein [Pseudomonas syringae pv. glycinea str. B076] Length = 741 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + D + + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLALHR 120 Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAVATTAAPGEPAPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204 D + + + L P+ + + ++ G D + Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240 Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244 + + + + K F +++DL N+ Sbjct: 241 QFEDMRLSGEVAGEPLLGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300 Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290 P SG S+A + + +S + ++ + L Sbjct: 301 LDKTPQISGGLSIAQLDLRTFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348 + + + V + L G D EE + K + +++ Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARKSEVQS 416 Query: 349 DDIQYSVNKKEEKD 362 + + + Sbjct: 417 GEAAAAAGDSPLPE 430 >gi|187479318|ref|YP_787343.1| hypothetical protein BAV2847 [Bordetella avium 197N] gi|115423905|emb|CAJ50457.1| putative exported protein [Bordetella avium 197N] Length = 687 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 95/354 (26%), Gaps = 31/354 (8%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF----PSVFFKDIRIDQKEDG 77 V +DW F+ + +G+ A++G + + + DIRI + G Sbjct: 24 IVVSNLDWNRFKPVINEKVMAAIGRPFAIQGDLSLTWGRSAGWGAHITASDIRIANTDWG 83 Query: 78 S--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW--FQRKSTMDM 133 + IE L+ LPLL + + ++ +P N + G +NW +S Sbjct: 84 QGADLAHIERLAFSLAALPLLRQRVEIHELQFTRPSANLERRADGQANWDFAMPESKGPS 143 Query: 134 IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL---------------QISARFLNIIS 178 V + I G+I+ D + + L I Sbjct: 144 SWTVDIGAIGFDQGQIRYRDALLNADLDMQIDPLGKPVPFAQIAGDALQTIKQADAATAQ 203 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 L + + G + + + A +Q A + G L Sbjct: 204 RLEAQTEDYVFGWKVKGQYKDLPVQGEGKAGGVLSLHTRPFPLQAELHAGTTHAAVVGTL 263 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQ-S 292 ++GD L G+ + S ++ + Sbjct: 264 TDPMHLGALDLRLQLSGDSMANLFPLTGVTLPDTPPYATDGHLQASLREAGGPQFHYRGF 323 Query: 293 ILPNSSTDEDNKTKVSQ-DEENLLNFSENGAES-MHDLNETDFFEEEEKKNKND 344 ++D + L+ + M DL + Sbjct: 324 NGKVGASDLHGDISFALQAPRPKLSGQLSSKLLRMADLGPLIGVQSGAGTTART 377 >gi|26987029|ref|NP_742454.1| AsmA family protein [Pseudomonas putida KT2440] gi|24981648|gb|AAN65918.1|AE016219_11 conserved hypothetical protein [Pseudomonas putida KT2440] Length = 748 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 99/306 (32%), Gaps = 42/306 (13%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KE 75 + F + D D++++ + A ++ + G I + P+ + + I + Sbjct: 20 VALGFALTHLFDPNDYKDEIRQLARDKAHVELTLNGDIGWSLFPWLGLELHEASIATLNK 79 Query: 76 DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------- 124 + ++ L + LPLL E+++ D+ ++ +L +G NW Sbjct: 80 PKEPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLTLARDEQGHGNWEDIGKPLPAQN 139 Query: 125 ---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 ++ D + ++ + V R++ D ++ Y + L Sbjct: 140 GASTDASAQAPAEQTPATTNSNDRAIKLDIDSLTVNNARVQYTDAKTGHSYSAESIQLST 199 Query: 170 SARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAFKI---TANFPAKNKAIS 218 L + IK G FD K + + + Sbjct: 200 GPIHEGANIALKASAFISASQPSIKARTELAGELRFDRKLKRYNFEDMRLSGETSGEPTG 259 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278 K F +++DL N+ + + G LNL K +LSG I Sbjct: 260 GKTVTFAAQGQLLVDLAANVASWNGLKVSANQLRALG----ELNLRDLDKAPQLSGGLSI 315 Query: 279 SDGNVR 284 + N+R Sbjct: 316 AQFNLR 321 >gi|167562590|ref|ZP_02355506.1| AsmA family protein [Burkholderia oklahomensis EO147] Length = 246 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 76/240 (31%), Gaps = 35/240 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + + +V+ DW + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIVAVLTAALGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P + I + ++ LPLL+ E+ + + + Sbjct: 67 DGETGWRAWVPWPMFSASQVVIGNPAWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P L+ + G +NW +K+ V L G + D ++ Sbjct: 127 VNPALDVERLADGRNNWTFEFKKTAGPSPWKVQLRDFGFAKGTVAYRDA-------ITKA 179 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 +L ++ L PL G + ++ +A K A L + Sbjct: 180 DLTVAIDTLGQQIPL------------GDVLRQQEATSRAASAQRVGKRGAAQLTAKAQA 227 >gi|83943880|ref|ZP_00956337.1| AsmA family protein [Sulfitobacter sp. EE-36] gi|83845127|gb|EAP83007.1| AsmA family protein [Sulfitobacter sp. EE-36] Length = 647 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 29/387 (7%), Positives = 102/387 (26%), Gaps = 26/387 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ ++ +G L +++V ++ + Q + G+++ + G + + P Sbjct: 1 MKWIIRAIGILLLILVVAVGSL-FLLPADRIARIAADQLRNLTGREVTITGDVGLTFWPV 59 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V + + + ++ + + L+ GEI++ ++ P + Sbjct: 60 LGVTAGGLEVGNADWAKDGAMLSAANAAIGVDAMALIRGEIKITNIEAQSPTIRLEQRRD 119 Query: 120 GVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 G ++W + + ++++ + + D E + ++L Sbjct: 120 GRASWQFSDGGGEAAIETAPTAPARSPRPLTIQRLDITDATLIY-DAEGRDLVRFDGVDL 178 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 + + + + + F N + + ++ Sbjct: 179 SLDWPERAGDAVIKAALRPAADRVSIEATIN----RFDQFLNGDIRPLRARADTKGGGVS 234 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-LSGNFKIS-DGNVRI 285 L G + + +A + L K+ ++ + ++ D + + Sbjct: 235 LTGRAGLAGAVAGDLWLKTSDTGRFLAALGVGDIALPQGLGKTADINLDLTLTPDRRLAL 294 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 ++ + +N N + Sbjct: 295 REVVADLG----GNALTGAADITLNGTPDVNAQINVGALDLTGFAGSAPSGTAPASSTPA 350 Query: 346 LKKDDIQYSVNKKEEKDNSHDKENQEN 372 ++ + E Sbjct: 351 PASPTGWSKAPIDASALSAFNGEVALR 377 >gi|291615693|ref|YP_003518435.1| YhjG [Pantoea ananatis LMG 20103] gi|291150723|gb|ADD75307.1| YhjG [Pantoea ananatis LMG 20103] Length = 693 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 100/362 (27%), Gaps = 42/362 (11%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + LP+P + +DI + Sbjct: 36 TFDWNRLKPTINQKVSAELNRPFAIRGDLGVAWQRNPEEPGWRGWLPWPHLHAEDIMLGN 95 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D ++ + L LL E+ + + + QP ++ +NW Sbjct: 96 PPDIPDVTMIHLQRVDATLAPLALLHKEVFIPWIKLQQPDARLIQTADKKNNWTFTLADS 155 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I G I D + L L + I Sbjct: 156 DSKDDNAPPSAWSFRLDNILFDQGTILYRDAVNQADVTLKVNPLGKPVPYSQIAGGDDKQ 215 Query: 184 SIKGSVI--AEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 G + + +G++ N++ + +++ + IQ + L G + Sbjct: 216 QGAGDFVFGWQASGSYHNEKLTGQGKIGGMLSLRSQTTAFPIQADVRNGSTRVQLTGGVQ 275 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYK 289 +GD L RL F DG V R + Sbjct: 276 DPLNLGGLDVRLRFSGDTLANLYGLTGVLLPDTPPYETDGRLIAKFTGKDGAVFRYQGFN 335 Query: 290 LQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES-MHDLNETDFFEEEEKKNKNDDLK 347 + SQ L + M DL + K + K Sbjct: 336 GHIGDSD----IHGSLTYSQGKPRPKLVGELRSDQLRMADLGPLIGVNSGKGSEKTEQAK 391 Query: 348 KD 349 Sbjct: 392 AK 393 >gi|289803470|ref|ZP_06534099.1| hypothetical protein Salmonellaentericaenterica_02522 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 433 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +D+ + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQESGWRSWVPWPHVHAEDVILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I GRI I D+ S + ++ + ++ Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206 Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236 + K + + G ++ + ++++ +Q + + G Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286 + K +GD L RL +V Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFNYR 326 Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344 + + + + L + DL + K+ Sbjct: 327 GFNGRIGDSD----IHGTFTYTTGKPSPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 + K Q K + + + F DK Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409 >gi|313496651|gb|ADR58017.1| AsmA family protein [Pseudomonas putida BIRD-1] Length = 750 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 98/309 (31%), Gaps = 44/309 (14%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KE 75 + F + D D++++ + A ++ + G I + P+ + + I + Sbjct: 20 VALGFALTHLFDPNDYKDEIRQLARDKAHVELTLNGDIGWSLFPWLGLELHEASIATLNK 79 Query: 76 DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--------- 126 + ++ L + LPLL E+++ D+ ++ +L +G NW Sbjct: 80 PKEPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLTLARDEQGHGNWEDIGKPLPAQN 139 Query: 127 -------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 + D + ++ + V R++ D ++ Y + L Sbjct: 140 GAGTDAPAQAPAQAEQAPATSDSNDRAIKLDIDSLTVNNARVQYTDAKTGHSYSAESIQL 199 Query: 168 QISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAFKI---TANFPAKNKA 216 L + IK G FD K + + + Sbjct: 200 STGPIHEGANIALKTSAFISASQPNIKARTELAGELRFDRKLKRYNFEDMRLSGETSGEP 259 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF 276 K F +++DL N+ + + G LNL K +LSG Sbjct: 260 TGGKTVTFAAQGQLLVDLAANVASWNGLKVSANQLRALG----ELNLRDLDKAPQLSGGL 315 Query: 277 KISDGNVRI 285 I+ N+R Sbjct: 316 SIAQFNLRT 324 >gi|77456549|ref|YP_346054.1| AsmA [Pseudomonas fluorescens Pf0-1] gi|77380552|gb|ABA72065.1| putative exported protein [Pseudomonas fluorescens Pf0-1] Length = 740 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 42/354 (11%), Positives = 108/354 (30%), Gaps = 44/354 (12%) Query: 18 VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KED 76 F + D D++++ + A ++ + G I + P+ + + + + Sbjct: 21 AAGFALTHLFDPNDYKDEIRQIARDKAHIELTLNGDIGWSLFPWLGLELHEASVATLAKP 80 Query: 77 GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW------------ 124 + ++ L + LPLL E+++ D+ ++ +L G NW Sbjct: 81 AEPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLRLNRDKNGHGNWEDIGKVPAPAGS 140 Query: 125 -------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 + ++ + V R++ D+ + + + + L A Sbjct: 141 TPPATAGEASPATPAPVEKPAQPIRLDIDSLTVNNARVEYNDELTGKQFSAESIQLSTGA 200 Query: 172 RFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNKAISLK 220 + P+ + G+ G F+ + + + + K Sbjct: 201 VHDSTNIPVKATAFLGTNQPVLRVRTELNGELRFERALQRYKFEDLKLSGEVAGDPLQGK 260 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280 F +++D N+ + G L K ++SG I+ Sbjct: 261 TVTFAAQGQLLLDKAANVAEWTGIKLSVNQLRALG----ELKANDLDKTPQISGGISIAQ 316 Query: 281 GNVR-ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 ++ Q++ + VS+ + + + L+++ F Sbjct: 317 FDLAKFVDSIGQTLPAMAEGSLSKVELVSRVAATPTSLALD--NINLKLDDSSF 368 >gi|113868758|ref|YP_727247.1| hypothetical protein H16_A2800 [Ralstonia eutropha H16] gi|113527534|emb|CAJ93879.1| Uncharacterized protein involved in outer membrane biogenesis [Ralstonia eutropha H16] Length = 783 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 46/368 (12%), Positives = 101/368 (27%), Gaps = 68/368 (18%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI---- 58 R+V++ ++ V L DW + + T +G+ A+ G + + Sbjct: 5 RKVVLWSVLTPIALIALLVVVILTFDWNRLKPWLNDRVTEAIGRPFAINGDLSVTWRRGE 64 Query: 59 --------LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P+P + +DI I + + + L +PLL+ +I V + +D Sbjct: 65 GEKGWHTLVPWPRLSARDITIANTDWAKQPNLATVRELIFVLRPIPLLAHQIAVPTIVVD 124 Query: 109 QPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-----QVYF 161 P + +NW + + ++ + G + + DQ ++ Sbjct: 125 SPAVWLERLPDARNNWTLEFGPKKGPSEWELHIGEVVLARGNLALADQLKKIELQAELDT 184 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS--------------------------------- 188 + L AR +++P + G Sbjct: 185 IGGSPLYDKARDGALVAPEASAVPPGPPASAPGAARAASAPAASAPGVSAPPATAKGPDD 244 Query: 189 ---VIAEGTGNFDNKRSAFKITANF--PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243 V + TG ++ A +N + I + G + Sbjct: 245 RYGVRWKATGRYNEATINASGKAGTVLSLRNADVPFPILADVRVGTTRAVIEGTVTNPAH 304 Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSIL 294 +++GD L RL + ++ + Sbjct: 305 LAALDVHLTLSGDSMARLYALTGVVLPSTPPYQTRGRLMATLRKQGSIYEYQKFTGRVGG 364 Query: 295 PNSSTDED 302 + S Sbjct: 365 SDLSGTLT 372 >gi|325525807|gb|EGD03534.1| AsmA family protein [Burkholderia sp. TJI49] Length = 251 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 68/209 (32%), Gaps = 16/209 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 + + + + +V++ A DW + Q + +G+ A+ G IK+ Sbjct: 15 IGKSAAWIVGIVAVLIAAAGVFLFTFDWNRAKPWVNEQVSAALGRPFAINGDIKVGWRRP 74 Query: 57 -------HILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+PS I I + + ++ LPLL+ EI + + + Sbjct: 75 DGETGWRAWVPWPSFSATQIEIGNPDWAKSPKFATLDAAHFDLAILPLLAHEIVIPSIDV 134 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P ++ + G + W + V L+ G + D + ++ Sbjct: 135 VNPAIDLERLADGRNTWTFQFKQSSQPSTWKVRLDSFGFAKGTVVYRDAITKADLTVAID 194 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194 L +++ S S G Sbjct: 195 TLGQPIPLGDVLKEQEQTSRAASAQRVGK 223 >gi|237802204|ref|ZP_04590665.1| AsmA family protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025061|gb|EGI05117.1| AsmA family protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 741 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 44/434 (10%), Positives = 118/434 (27%), Gaps = 77/434 (17%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + D + + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELNDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLMLHR 120 Query: 117 SSKGVSNW------------------------FQRKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAVAATAASDDSTPAPAPDAPKTDRPAQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204 D + + + L P+ + + ++ G D + Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRTKTELVGQLRMDRVLKRY 240 Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244 + + + + K F +++DL N+ Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300 Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLSG----------NFKISDGNVRISRYKL 290 P SG S+A + + ++ + ++ + L Sbjct: 301 LDKTPQISGGLSIAQLDLRTFLDSIGQPLPAMTDGALSKVEMVTRLAGTPTSLALENLNL 360 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEE--EKKNKNDDLKK 348 + + + V + L G D EE K + +++ Sbjct: 361 KV----DDSSFTGRIAVDDFAKQALRVQLKGDTFNADRYRPAESEESKGTKAARKAEVQS 416 Query: 349 DDIQYSVNKKEEKD 362 + + Sbjct: 417 GEAAAVAGDSPLPE 430 >gi|167569773|ref|ZP_02362647.1| AsmA family protein [Burkholderia oklahomensis C6786] Length = 305 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 76/240 (31%), Gaps = 35/240 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + + +V+ DW + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIVAVLTAALGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P + I + ++ LPLL+ E+ + + + Sbjct: 67 DGETGWRAWVPWPMFSASQVVIGNPAWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P L+ + G +NW +K+ V L G + D ++ Sbjct: 127 VNPALDVERLADGRNNWTFEFKKTAGPSPWKVQLRDFGFAKGTVVYRDA-------ITKA 179 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 +L ++ L PL G + ++ +A K A L + Sbjct: 180 DLTVAIDTLGQQIPL------------GDVLRQQEETSRAASAQRVGKKGAAQLTAKAQA 227 >gi|316935672|ref|YP_004110654.1| AsmA family protein [Rhodopseudomonas palustris DX-1] gi|315603386|gb|ADU45921.1| AsmA family protein [Rhodopseudomonas palustris DX-1] Length = 648 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 110/317 (34%), Gaps = 27/317 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R+ I + L + L GA + L ID R+ E+Q G ++AV G I + I P Sbjct: 5 IKRLGISVAVLVAAALTGAVALSLTIDRGVLRQAVEQQLRAATGLQLAVDGAIDVTIFPR 64 Query: 62 PSVFFKDIRID--QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 +V F D+R+ G ++ L LPLL + D+ + QP ++ + Sbjct: 65 STVVFSDVRLASDGDGGGDAALSVKTLIANLRLLPLLLRRFEIADVVLGQPSIHVVRDAD 124 Query: 120 GVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 G SNW R + V +I ++ G + D + + D++L ++ Sbjct: 125 GRSNWTPFIASLTRTMKPGLDDQVSFSEIRLQDGELSYRDDTAGVHEHIGDIDLSLAWPS 184 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 ++ + G G D + A + I L++ P+ I Sbjct: 185 ISRTF-----AATGQFDFRGE-RIDGSITIADFIAALRGDSSGIKLRLA----GAPMKIA 234 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRI 285 G + N+ +G + + + L + +V + Sbjct: 235 FDGTVA-NKSALSLTGTVTADSASLRNALRWAGQEPPGAGGFGRFALKARANLMGPSVAL 293 Query: 286 SRYKLQSILPNSSTDED 302 + ++ + Sbjct: 294 TNVNVELDKNVAEGVMT 310 >gi|327395958|dbj|BAK13380.1| AsmA family protein YhjG [Pantoea ananatis AJ13355] Length = 685 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 100/362 (27%), Gaps = 42/362 (11%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + LP+P + +DI + Sbjct: 28 TFDWNRLKPTINQKVSAELNRPFAIRGDLGVAWQRNPEEPGWRGWLPWPHLHAEDIMLGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D ++ + L LL E+ + + + QP ++ +NW Sbjct: 88 PPDIPDVTMIHLQRVDATLAPLALLHKEVFIPWIKLQQPDARLIQTADKKNNWTFTLADS 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I G I D + L L + I Sbjct: 148 DSKDDNAPPSAWSFRLDNILFDQGTILYRDAVNQADVTLKVNPLGKPVPYSQIAGGDDKQ 207 Query: 184 SIKGSVI--AEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 G + + +G++ N++ + +++ + IQ + L G + Sbjct: 208 QGAGDFVFGWQASGSYHNEKLTGQGKIGGMLSLRSQTTAFPIQADVRNGSTRVQLTGGVQ 267 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYK 289 +GD L RL F DG V R + Sbjct: 268 DPLNLGGLDVRLRFSGDTLANLYGLTGVLLPDTPPYETDGRLIAKFTGKDGAVFRYQGFN 327 Query: 290 LQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES-MHDLNETDFFEEEEKKNKNDDLK 347 + SQ L + M DL + K + K Sbjct: 328 GHIGDSD----IHGSLTYSQGKPRPKLVGELRSDQLRMADLGPLIGVNSGKGSEKTEQAK 383 Query: 348 KD 349 Sbjct: 384 AK 385 >gi|104784109|ref|YP_610607.1| AsmA protein [Pseudomonas entomophila L48] gi|95113096|emb|CAK17824.1| putative AsmA protein [Pseudomonas entomophila L48] Length = 749 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 105/308 (34%), Gaps = 43/308 (13%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KE 75 + F + D D++++ + A ++ + G I + P+ + + I Sbjct: 20 VALGFALTHLFDPNDYKDEIRQLARDKAHVELTLNGDIGWSLFPWLGLELHEASIATLNN 79 Query: 76 DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------- 124 + ++ L + LPLL E+++ D+ ++ +L + G NW Sbjct: 80 PKVPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLTLTRDANGHGNWEDIGKPLPDAT 139 Query: 125 ----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 + + + + ++ + V R+ D+++ Q Y + L Sbjct: 140 AANAPAATPGEAPVNPAAKPEPSERMVKLDIDSLTVNNARVLYTDEKAGQSYGAESIQLS 199 Query: 169 ISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAFKI---TANFPAKNKAI 217 A I PL + IK G FD K + + + + + Sbjct: 200 TGAVHEGINIPLKASAFLSASQPNIKARTELTGELRFDRKLKRYNLEDMRLSGETSGEPL 259 Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 + K F +++DL N+ + + G LN+ K ++SG Sbjct: 260 AGKTLTFVAQGQVLVDLAANVASWSGLKVSANQLRALG----ELNVRDLDKAPQVSGGLS 315 Query: 278 ISDGNVRI 285 I+ ++R Sbjct: 316 IAQFDLRT 323 >gi|312174245|emb|CBX82498.1| Uncharacterized protein yhjG [Erwinia amylovora ATCC BAA-2158] Length = 663 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 45/363 (12%), Positives = 98/363 (26%), Gaps = 40/363 (11%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDI 69 T DW + R+ + + + A++G + + +P+P V +DI Sbjct: 2 TAIALFDWNRLKPTINRKVSAEINRPFAIRGDLGVSWQRNRGEPGWRSWVPWPQVHAQDI 61 Query: 70 RIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW--- 124 + D ++ + L LLS +I + + + QP ++ G +NW Sbjct: 62 MLGNPPDIPDVTMVHLQRVEATLSPLALLSRQIYLPWISLQQPQARLVQTANGKNNWTFN 121 Query: 125 -----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 Q+ + L+ I G + D + + L + + Sbjct: 122 LAGSDDQQAGKGSSAWSFRLDNIAFDRGTVSYRDAINQADVQVMVDPLGKPVPYGQLAGG 181 Query: 180 LSIDSIKGSVI--AEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLF 235 + +G + N++ + + +++ I + + Sbjct: 182 DDKQKGAADFVFGWRASGTYHNEKLSGEGKTGGMLSLRSQNTPFPIAADVRNGTTRVRIA 241 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGN-VRI 285 G + +GD L L+ F+ +G R Sbjct: 242 GTVRDPLNMGAVDIRLRFSGDTLANLYGLTGVLLPETPPYETDGHLTARFQQPNGAEFRY 301 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES-MHDLNETDFFEEEEKKNKND 344 + + L + + M DL + K Sbjct: 302 QNFNGHIGDSDIRGSL---AYRQGKPRPELTGTLESLQLRMADLGPLIGVNSGKDSAKTA 358 Query: 345 DLK 347 K Sbjct: 359 RAK 361 >gi|332286914|ref|YP_004418825.1| AsmA protein [Pusillimonas sp. T7-7] gi|330430867|gb|AEC22201.1| AsmA protein [Pusillimonas sp. T7-7] Length = 712 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 103/324 (31%), Gaps = 37/324 (11%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 +V++GL +++LV A ++ +W R RQA+ + + +A++G + + Sbjct: 6 KVILGLCLGLALILVLAVSLLASFNWNYARPWVNRQASELADRSVAIQGDLDVQWIRPHD 65 Query: 58 ------ILPFPSVFFKDIRIDQKED---GSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 LP+P + DI + +++ LS+ LL +++ + I Sbjct: 66 EPGWRGWLPWPQISASDIVVGNPAWIPQEKNMARVSQLSVLINPAALLERTVQIASLQIG 125 Query: 109 QPHLNFYLSSKGVSNWFQ--RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 Q L + G +NW V L+ + ++G +++D S Sbjct: 126 QADLLLQRQADGAANWTLHKDPQESASAWKVDLQTLSLEGVHAQVLDAVSTLELTAE--- 182 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 LN + D A+G K + + +Q Sbjct: 183 -------LNTLQEQGADGYGIGWKADGAYRGAGVSGEGKTGGLLSLREGSKPFPLQGQVH 235 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFK 277 I+L G++ + ++GD L L L G + Sbjct: 236 IGSTTIELEGSVVRPQNIAALDVNLKLSGDTMADLYPLLGVALPNTPPYRTEGHLIGELE 295 Query: 278 ISDGNVRISRYKLQSILPNSSTDE 301 D R +K + Sbjct: 296 GDD-TWRYESFKGMVGKSDLEGTL 318 >gi|229587886|ref|YP_002870005.1| hypothetical protein PFLU0324 [Pseudomonas fluorescens SBW25] gi|229359752|emb|CAY46602.1| putative exported protein [Pseudomonas fluorescens SBW25] Length = 736 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 47/375 (12%), Positives = 108/375 (28%), Gaps = 69/375 (18%) Query: 18 VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KED 76 F + D D++++ + A ++ + G I + P+ + + + Sbjct: 21 ALGFALTHLFDPNDYKDEIRQIARDKAHIELTLNGDIGWSLFPWLGLELHEASVATLTAP 80 Query: 77 GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---------- 126 + ++ L + LPLL E+++ D+ ++ +L +G NW Sbjct: 81 TQPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLRLNRDKQGHGNWEDIGKNVTEASV 140 Query: 127 ------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + ++ + + R++ D+++ + + + L A Sbjct: 141 GSPGSVEQPAESEPEKPAKPIRLDIDSLTINNARVEYNDEQTGKQFSAESIQLSAGAVHE 200 Query: 175 NIISPLSIDSIKGS--------VIAEGTGNFDNKRSAFKI---TANFPAKNKAISLKIQL 223 P+ + + GS G +++ A + + K Sbjct: 201 GASIPVKLTAFFGSNQPVMRVKTELNGNLRIQRALKRYQLEDMKITGEATGEPLQGKTVT 260 Query: 224 FPLAYPIIIDLFGNLFWN---------------------EKQPIYSGVFSVAGDFSKL-- 260 F +++D N+ +K P SG S+A Sbjct: 261 FSTQGQLLVDQAANIAEWTNMKLSANQLRALGELKVNDLDKTPQLSGALSIAQFDLAKFL 320 Query: 261 --------LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312 + S K L K + +V + L+ + + V + Sbjct: 321 DSVGHPLPPMADGSLSKVELVSRLKGTPTSVALEDLNLKL----DGSTFTGRVAVEDFAK 376 Query: 313 NLLNFSENGAESMHD 327 L G D Sbjct: 377 QSLRVQLKGDTFNAD 391 >gi|329113698|ref|ZP_08242473.1| Putative protein YhjG [Acetobacter pomorum DM001] gi|326696961|gb|EGE48627.1| Putative protein YhjG [Acetobacter pomorum DM001] Length = 725 Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 42/374 (11%), Positives = 114/374 (30%), Gaps = 46/374 (12%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64 VLIGLG +++ F W F +AT I+ +K ++ + + + ++ Sbjct: 25 VLIGLGCFLLAIILLIV----FWSWDWFVPLVNSRATAILHRKTTIE-HLHVALGRVTTI 79 Query: 65 FFKDIRIDQKEDGSF----ESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYLSSK 119 +++RI+Q + ++ + L++ + L + + + + +P + Sbjct: 80 RVENLRIEQPKTFDQEKDLFAQSKELTVSVDVWSYLWHRALHIPLIALTEPKADILARKN 139 Query: 120 GVSNWFQRKSTMDMIHN----------VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 G +N+ + N + ++ + G + + + Sbjct: 140 GENNYTFTEDGKPAPANKNKTEQASSLPDIGELRITNGALHVRHDPLQADMQM------- 192 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLA 227 + + + +GS+ G + + + + + LF Sbjct: 193 -----GVETTPPQGNNRGSLRLTAKGRYAQQPITARFVGGTVLSFVDDKEPYPVDLFVQN 247 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGN 282 P L G++ AG LL R ++G + + Sbjct: 248 GPTTATLKGDVVHPLTLSGAHLKLHFAGPDMSLLYPLTGVPIPRTPAYSITGALNYTREH 307 Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLL-NFSENGAESMHDLNETDFFEEEEKKN 341 V ++ + + +++ E+ + + + + F + Sbjct: 308 VVFKDFEGKMGTSD----IGGTIEINPHEKPIFVQADLHSKQVNLV--DLGGFIGAKPDK 361 Query: 342 KNDDLKKDDIQYSV 355 + K + +V Sbjct: 362 TKAEEKAEAKSNTV 375 >gi|167738309|ref|ZP_02411083.1| AsmA family protein [Burkholderia pseudomallei 14] Length = 242 Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 16/177 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + +F+V+ DW + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P I I + ++ LPLL+ E+ + + + Sbjct: 67 DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 P L+ + G +NW ++S V L G + D + + Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183 >gi|304398126|ref|ZP_07380001.1| AsmA family protein [Pantoea sp. aB] gi|304354412|gb|EFM18784.1| AsmA family protein [Pantoea sp. aB] Length = 686 Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 50/384 (13%), Positives = 109/384 (28%), Gaps = 41/384 (10%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + I +P+P + +DI + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGIDWARNRDEAGWRRWVPWPQIHAEDIMLGN 87 Query: 74 KED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------ 125 D ++ + L LL E+ + + + +P ++ +NW Sbjct: 88 PPDISDVTMVHLQRVDATLSPLSLLHKELFIPWIKLQRPDARLIQTADKKNNWTFTLADS 147 Query: 126 --QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 K+ + L+ I G+I+ D + + L + I Sbjct: 148 DKDEKNAAPSAWSFRLDNILFDQGQIRYRDAINRADVTVQVNPLGKPVPYTQIAGGDDQQ 207 Query: 184 SIKGSVI--AEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 G + + +G ++N++ +++ IQ + + G L Sbjct: 208 KGAGDFVFGWQASGTYNNEKLTGDGKIGGMLSLRSQNTPFPIQADVRNGTTRVQVTGGLQ 267 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYK 289 + +GD L L F G V R ++ Sbjct: 268 DPMNLGGLNVRLRFSGDTLANLYGLTGVLLPDTPPYETDGHLIAKFNGKKGAVYRYEKFN 327 Query: 290 LQSILPNSSTDEDNKTKVSQ-DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 + SQ L+ + + K ++ K Sbjct: 328 GHIGDSD----IHGSLIYSQVKPRPTLSGEMTSEQLRMADLGPLIGVDSGKGSEKTAQAK 383 Query: 349 DDIQYSVNKKEEKDNSHDKENQEN 372 N+ ++ HDK +N Sbjct: 384 ARRGEKSNQPADRVLPHDKFETKN 407 >gi|119900137|ref|YP_935350.1| outer membrane protein [Azoarcus sp. BH72] gi|119672550|emb|CAL96464.1| outer membrane protein [Azoarcus sp. BH72] Length = 682 Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 88/338 (26%), Gaps = 42/338 (12%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQKE 75 DW R + + +G+ A+ G + + LP V D+ + E Sbjct: 30 DWNRLRPTVNERVSAALGRPFAINGDLTVRWARADDPPGWRAWLPALQVGAADLVLGNPE 89 Query: 76 DG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM 133 + E + R LPLL+ ++R+ + + QP L ++ G + W + Sbjct: 90 WAQRPGFAAFERVDFRLALLPLLAHQVRIPRIEVRQPALQLERAADGRATWTFDQGDDKD 149 Query: 134 I----HNVILEKIHVKGGRIKIIDQESDQVY--FLSDLNLQISARFLNIISPLSIDSIKG 187 + + +I G + D L+ L I + D+ Sbjct: 150 DAAPRWQLDIGEIAFDRGTATVDDAVLGLQAEGELTPLEAAIPFADIVGKGATQTDATAP 209 Query: 188 S-------VIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNL 238 + + G + ++ + + +Q+ I L G L Sbjct: 210 TPAPADYAFAWQARGRYQDQPFNARGKLGGLLALHGRGQPFPLQVEARIGATRITLAGVL 269 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFK-ISDGNVRISRY 288 +AG+ L L + + R + Sbjct: 270 VDPRAPEALDLQLRLAGNSLADLYPLTGVTLPETPPYSTEGHLIAQLQGADGRSFRYRDF 329 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + D + L+ Sbjct: 330 SGRIGDSEIRGDL---AYTTAAPRPRLSGELRSRLLRL 364 >gi|254447477|ref|ZP_05060943.1| AsmA family protein [gamma proteobacterium HTCC5015] gi|198262820|gb|EDY87099.1| AsmA family protein [gamma proteobacterium HTCC5015] Length = 673 Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 94/299 (31%), Gaps = 45/299 (15%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF-- 79 + +F+D DF+ E+ G+++ + G I P + + + + Sbjct: 31 GLMIFVDPNDFKPQIEQAVVENTGRELTIDGDISWAFWPRFGLNIGHTELSNADGYTARV 90 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI----- 134 ++I+ + + + LPLL G + +Y+D N + S G +NW Sbjct: 91 FAEIDEVDVGIQVLPLLKGAVEADVIYLDGLVANLEVKSSGKTNWDDFVEADGRPASVKE 150 Query: 135 -------------------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ------- 168 + L IHV+ ++ D L D N + Sbjct: 151 GPRAATVNQGDQATGLASLPPIRLGGIHVRDAQVNYSDLSGGMAAMLEDFNFKTGPIVLW 210 Query: 169 ----------ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218 I ++ +++ + + + + ++ + K P N ++S Sbjct: 211 EPISFEGDFTIENKYPELLAEFDYSGVLTAKVLDDKFALNDFKLGLKAQ-GEPVPNGSVS 269 Query: 219 LKIQLFPLAYPIIIDLF-GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF 276 L + A L + G SV G ++ +++ K + Sbjct: 270 LSLAADVSADTAAETAELAKLQIKLDETTIDGKASVKGFSEPAIDFDVAVDKLNVDHYL 328 >gi|226942611|ref|YP_002797684.1| hypothetical protein Avin_04540 [Azotobacter vinelandii DJ] gi|226717538|gb|ACO76709.1| conserved hypothetical protein [Azotobacter vinelandii DJ] Length = 748 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 53/417 (12%), Positives = 111/417 (26%), Gaps = 82/417 (19%) Query: 21 FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK-EDGSF 79 F + D D++++ + A ++ + G I + P+ + + + Sbjct: 24 FALTQLFDPNDYKDEIRQLARDKANLELTLNGDIGWSLFPWLGLQLQQTSVASARTPDQP 83 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN--- 136 + ++ + + LPLL EI++ D+ +D L+ +G NW Sbjct: 84 FADLDMIGLSVRVLPLLRREIQMSDIRVDGLELHLRRDKQGRGNWEDIGRPARTAGQPEP 143 Query: 137 -----------------------------VILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 + ++ + + R+ +D+ S Q + + L Sbjct: 144 EATAGTDTAPAEAPAAADAADAGSARALRLDIDSLALNNARVDYLDERSGQKFSAESIQL 203 Query: 168 QISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNKA 216 A + PL + + GS EG FD+ F + A + Sbjct: 204 NSGAIRPDSDIPLKLTAFFGSNQPVMRARTDLEGVLRFDSALQRFQLGNARLSGEASGEP 263 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV----------------------- 253 + K F ++ DL + + + Sbjct: 264 LKGKSLNFAAQGELLADLAAQVAEWNGLKLSANQLRAIGELKVRELDKIPQLSGGLSIAQ 323 Query: 254 ---------AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 G S + L+ S V + L+ + + Sbjct: 324 FNPREFLAGLGQELPATADPASLTRLELTTQLGGSPSAVAFDKLDLKL----DDSQFTGR 379 Query: 305 TKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359 V+ L G + D L E + ++K N Sbjct: 380 IAVADLARQALRVQLKGDKLDLDRYLAPKSEKREAAGAARQAEVKGAVASAIQNSDT 436 >gi|127513044|ref|YP_001094241.1| AsmA family protein [Shewanella loihica PV-4] gi|126638339|gb|ABO23982.1| AsmA family protein [Shewanella loihica PV-4] Length = 614 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 105/362 (29%), Gaps = 30/362 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 + +LI LF +++ + L D DF+ G+ + +K + P Sbjct: 5 KWLLIVFASLFLLLIA---YLTLIFDPNDFKPQIVEAVKKQTGRDLVIKQDLSWTFFPSI 61 Query: 63 SVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + DI + E K++G+ +PLLS E+ + + +D LNF G Sbjct: 62 GIALGDISLSNPEGFKHDTMLKVDGIVAEVALMPLLSKEVEIAQLNLDGLTLNFDSYKNG 121 Query: 121 VSNW-------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 S+ + ++ + I + ++ + D+ + + Sbjct: 122 RSSMDGLTSTGEKADKAGDKTGSDGAAQVSVQLSSLNIGGIAITNTQVNLYDEATGKTQA 181 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221 L+ +L + L + L + + + A K+ I + Sbjct: 182 LTLESLTLGEFSLGQFADLGYKFSMTQPEMKVSSQGKGQIKVDPSLAKIAIKDFEIENSL 241 Query: 222 QLFPLAYP-IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN----LELSAKKSRLSGNF 276 + + + I+L L + + V S + AK + + Sbjct: 242 EGDAIPNKRMNINLTTQLELDNNAKTMALVLSSLNVEQIKAQGKMSVNYGAKVPDVVASM 301 Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEE 336 D +V + E +L + D + Sbjct: 302 SFGDVDVT-PFMAKDDGTKGEDKTAKGEGTAPAKEPDLSGMKAVNLKLDLDAKSVTADKI 360 Query: 337 EE 338 + Sbjct: 361 KT 362 >gi|167845444|ref|ZP_02470952.1| AsmA family protein [Burkholderia pseudomallei B7210] Length = 251 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 16/177 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + +F+V+ DW + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P I I + ++ LPLL+ E+ + + + Sbjct: 67 DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 P L+ + G +NW ++S V L G + D + + Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183 >gi|167823909|ref|ZP_02455380.1| AsmA family protein [Burkholderia pseudomallei 9] Length = 238 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 16/177 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + +F+V+ DW + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P I I + ++ LPLL+ E+ + + + Sbjct: 67 DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 P L+ + G +NW ++S V L G + D + + Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183 >gi|167815495|ref|ZP_02447175.1| AsmA family protein [Burkholderia pseudomallei 91] Length = 244 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 16/177 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + +F+V+ DW + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P I I + ++ LPLL+ E+ + + + Sbjct: 67 DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 P L+ + G +NW ++S V L G + D + + Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183 >gi|167719311|ref|ZP_02402547.1| AsmA family protein [Burkholderia pseudomallei DM98] gi|167893988|ref|ZP_02481390.1| AsmA family protein [Burkholderia pseudomallei 7894] Length = 241 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 16/177 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + +F+V+ DW + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P I I + ++ LPLL+ E+ + + + Sbjct: 67 DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 P L+ + G +NW ++S V L G + D + + Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183 >gi|217973502|ref|YP_002358253.1| AsmA family protein [Shewanella baltica OS223] gi|217498637|gb|ACK46830.1| AsmA family protein [Shewanella baltica OS223] Length = 607 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 39/343 (11%), Positives = 119/343 (34%), Gaps = 25/343 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + L + +++L+ + +F D DF+ + G+++ + + P Sbjct: 1 MKFIKWLLALVVTLILLVTVYLTVFFDPNDFKPEIVDAVKKQTGRELVIADDLSWTFFPV 60 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + E + ++ +PL S +I + ++ +D +N Sbjct: 61 IGINLGGVSLSNPEGFTPKAMLEVNKAVAEVALMPLFSQQIEIAELSLDGATINLVTRKN 120 Query: 120 GVSNW--------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 G S++ S+ ++ + + I + +I +ID+ Q + Sbjct: 121 GTSSFDGLSGDNSKKAATPAAETSSNAKLNEINIGGISITNTQINMIDEAKKQTQVFTLK 180 Query: 166 NLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221 + + L +P++ + +V +EG G R ++ N + + + Sbjct: 181 SFTLGEFALEQFAPIAFEFSATMPDMTVSSEGKGELKLSRDFTQLVVNGLKIDTVVEGE- 239 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLL-NLELSAKKSRLSGNFKIS 279 + I L + +++Q + A + + + K +++ +F++ Sbjct: 240 SIPNKKLETSISLATQIALDKQQLSVDIAQLTAASITAAGKVGVNYATKIPQINADFQVG 299 Query: 280 DGNVR--ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320 D ++ + + + ++ + + L+ Sbjct: 300 DIDLDTLLPKTETAAVTEQAPAASTQAVEPDLSALKQLDVKLK 342 >gi|86748582|ref|YP_485078.1| AsmA [Rhodopseudomonas palustris HaA2] gi|86571610|gb|ABD06167.1| AsmA [Rhodopseudomonas palustris HaA2] Length = 654 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 64/346 (18%), Positives = 120/346 (34%), Gaps = 34/346 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R+ I + L ++ ++GA + L ID R+ E Q G ++AV G I+I I P Sbjct: 5 IKRLGISVAALIALAVIGALALSLLIDRGAMRQAVETQLRAATGLELAVDGDIEIAIFPL 64 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V FK +R+ +DG +E L+ LPLL + D+ + +P + + Sbjct: 65 SYVTFKAVRLKGSDDGDADSALGVETLTANLRLLPLLLRRFEIADIALIRPTIRVVRDAD 124 Query: 120 GVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 G SNW R + V +I ++ G + D LSD++L Sbjct: 125 GGSNWTPFIKSLTRTMKPGLDDQVSFSEIRLQDGVLSYRDAAGQISETLSDIDL------ 178 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPIII 232 L+ SI + A G ++ +R I+ A ++L P+ + Sbjct: 179 -----SLAWPSISRTFAAAGQFDWRGERLDGSISVGDFIAALAGERSGLKLRLAGAPLKL 233 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVR 284 G + N+ + G S + + + + + Sbjct: 234 AFDGAIA-NKSSLVLEGTLSADSASLRNALRWAGQEPPGAGGFGRFAMKARANLVGPAIA 292 Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330 ++ ++ + + N A M D+ Sbjct: 293 LTNVNIEL----DKNVAEGVMTYTIAG-NHRGLQATLAAGMIDVTP 333 >gi|134295807|ref|YP_001119542.1| AsmA family protein [Burkholderia vietnamiensis G4] gi|134138964|gb|ABO54707.1| AsmA family protein [Burkholderia vietnamiensis G4] Length = 753 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 35/241 (14%), Positives = 77/241 (31%), Gaps = 35/241 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 + + + + +V++ A DW + + +G+ A+ G +K+ Sbjct: 7 IGKSAAWIVGIVAVIIAAAGIFIFTFDWNRAKPWVNEHVSAALGRPFAINGDLKLGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+PS+ + I + G ++ LPL + +I + + + Sbjct: 67 IGETGWRAWVPWPSLSATQLEIGNPDWAQGQKFVTLDAAHFDLAILPLFAHQIVIPSIDV 126 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P ++ + G + W + V L+ G I D ++ Sbjct: 127 VNPAVDLERLADGRNTWTFQFKQSGQPSKWQVRLKSFAFAKGTIVYRDA-------ITKA 179 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 +L I+ L PL G ++++ +A K A L + Sbjct: 180 DLTIAVDTLGKPIPL------------GDVLKQQEQTSRAASAQRVGKRGAAQLSAKANA 227 Query: 226 L 226 Sbjct: 228 D 228 >gi|114563380|ref|YP_750893.1| AsmA family protein [Shewanella frigidimarina NCIMB 400] gi|114334673|gb|ABI72055.1| AsmA family protein [Shewanella frigidimarina NCIMB 400] Length = 606 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 39/371 (10%), Positives = 102/371 (27%), Gaps = 59/371 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ V L + ++V+ + +F D +F+ G+ + + + + P Sbjct: 1 MKVVKWLLAIVLTIVVGITVYLTMFFDLNNFKPQIVDAVKKQTGRDLQISQDLSWSVFPS 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIE--GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + I + + + ++ +PL S +I V + +D LN Sbjct: 61 LGIKLGGISLSNPNGFTPAAMLDVNEAVANVALMPLFSQQIEVDLLKLDGLTLNLVTQKD 120 Query: 120 GVSNWF--------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 G +++ S + + + I + I IID S+ S Sbjct: 121 GKTSFDGLTAETSAEKPQSTSSNSEAMSLQTLDIGGIELTNTNINIIDMASNTTQTFSLK 180 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 + + L + + T S+ + + +++ Sbjct: 181 SFTLGQFSLGQFADF-------AYEFSATLPDMQLASSGQGKIKVDQALQNVTIN----- 228 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 + V GD + + + + + Sbjct: 229 --------------------DFDMVHKAQGDSLPGKAIT---AELSTQMKMALDAKTIEL 265 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDE-ENLLNFSENGAESMHD---LNETDFFEEEEKKN 341 K+ ++ K++ + + + + D + +E E Sbjct: 266 QLTKMSAM----DLAATGDIKINYGNSIPKIAMNLDVGDIDVDALLPKQEGDAKENEATP 321 Query: 342 KNDDLKKDDIQ 352 + K+ D+ Sbjct: 322 ETAPSKEPDLS 332 >gi|295097116|emb|CBK86206.1| Uncharacterized protein involved in outer membrane biogenesis [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 680 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 49/385 (12%), Positives = 105/385 (27%), Gaps = 43/385 (11%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 RV+ +F +++V + DW + ++ + + + A++G + + Sbjct: 6 RVISWTAGIFLLLIVVLIIIIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKE 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V DI + D + + L LL+ + + + + Q Sbjct: 66 ETGWRSWVPWPHVHADDIILGNPPDIPEVTMIHLPRVEATLAPLALLTKTVYLPWIKLQQ 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW ++ + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFDLASSGDKDQNAQPSSWSFRLDNILFDRGRIAIDDKVSKADVE 185 Query: 162 LSDLNLQISARFLNIISP----LSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L F + + G ++ + K +++ Sbjct: 186 ILVDPLGKPLPFSEVTGSKAKGDDSKAGDYVFGLTAKGRYNGQPLTGKGKIGGMLALRSE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS----- 270 +Q + + G + AGD L Sbjct: 246 GTPFPVQADFRSGNTRVAFVGTVNDPMNMGGVDLQLKFAGDSLGELYDLTGVLLPDTPPF 305 Query: 271 ----RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES 324 RL +V + + + + L + Sbjct: 306 ETDGRLVAKINTEKSSVFDYRGFNGRIGDSD----IHGTLTYTTGKPRPKLEGDVESRQL 361 Query: 325 MHDLNETDFFEEEEKKNKNDDLKKD 349 + K K+ ++KKD Sbjct: 362 RLADLGPLIGVDSGKGTKSKEVKKD 386 >gi|94311576|ref|YP_584786.1| AsmA [Cupriavidus metallidurans CH34] gi|93355428|gb|ABF09517.1| putative outer membrane biogenesis protein (yhjG-like) [Cupriavidus metallidurans CH34] Length = 735 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 45/378 (11%), Positives = 99/378 (26%), Gaps = 51/378 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHI------------LPFPSVFFKDIRIDQ 73 DW + + T +G+ A+ G + + +P+P + KDI + Sbjct: 31 TFDWNRIKPWLNDKVTQAIGRPFAINGDLTVTWRRAEGEAGWRALVPWPRLSAKDITVGN 90 Query: 74 KEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW--FQRKS 129 + + I L PLL+ EI V + +D P + + +NW Sbjct: 91 PDWAKQPSLATIRELIFILRPAPLLTHEISVPTIVVDSPAVWLERLADRRNNWTFDTGPE 150 Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQE-----SDQVYFLSDLNLQISARFLNIISPLSIDS 184 T + ++ + +I ++ G + + D + + D L R + + Sbjct: 151 TGESPWHLDVGEIVLERGNLSLNDGAEKIELQATLDTIGDQPLYDQERDGALAPSADASA 210 Query: 185 IKGS----------------VIAEGTGNFDNKRSAFKITANFP--AKNKAISLKIQLFPL 226 + + G+++ A ++ +Q Sbjct: 211 ASAPAGASNKTESKPESRYGIRWKVVGHYNQATINATGKAGTALSLRDTRKPFPLQADVR 270 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFK 277 + G L + ++GD L RL K Sbjct: 271 VGGTRARIEGTLTNPAELGALDVSLVLSGDNMARLYALTGVVLPSTPPYETRGRLVATLK 330 Query: 278 ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEE 337 + + + + + LL+ + + E Sbjct: 331 KGASSYTYRNFTGKVGSSDLGGTLT---FAQRAPRPLLSGELVSKQLLFTDLAPIIGAEA 387 Query: 338 EKKNKNDDLKKDDIQYSV 355 + + V Sbjct: 388 KPGQAAAESTVKQPANKV 405 >gi|212218484|ref|YP_002305271.1| ASMA [Coxiella burnetii CbuK_Q154] gi|212012746|gb|ACJ20126.1| ASMA [Coxiella burnetii CbuK_Q154] Length = 508 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 109/317 (34%), Gaps = 30/317 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ ++ + L V + + ++ D+++ + G+ + +KG + +P+ Sbjct: 11 IKILVSVVAALLLVSTISVVVLTKLVNPNDYKDRIDHYVYNQTGRHLMLKGNVGWSFIPW 70 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V K + + + I + ++ F PLL G + + + +D+ +N + Sbjct: 71 LGVDLKQVELSNPVGFQGENLANIGEIKIKVRFWPLLMGRVELDKITLDKATINLIKNKN 130 Query: 120 GVSNWFQ-----------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 G NW Q K + + + I+V I +I+Q+S L Sbjct: 131 GKDNWAQWSHSAVTKNNSKNTADNNKKMTAPVTELKIAGINVCNTTINLINQKSSSTTSL 190 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 +NL + P+S+ + T + ++ F T A + Sbjct: 191 KKINLTTGPIGNAVNFPVSM---------QFTLASNQSKNTFNATLTADADLNFQQSNYR 241 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L + + + L L + + ++ + L +L+G +I+ Sbjct: 242 LSNIKFNGTL-LRPTLPPVPVNIVTNLTANLNQQNISISPLNSKLANMQLNGKIEINQLQ 300 Query: 283 VRISRYKLQSILPNSST 299 R ++ N+ Sbjct: 301 -TTPRLSIKLGTANTDL 316 >gi|209363974|ref|YP_001424500.2| ASMA [Coxiella burnetii Dugway 5J108-111] gi|207081907|gb|ABS77622.2| ASMA [Coxiella burnetii Dugway 5J108-111] Length = 508 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 109/317 (34%), Gaps = 30/317 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ ++ + L V + + ++ D+++ + G+ + +KG + +P+ Sbjct: 11 IKILVSVVAALLLVSTISVVVLTKLVNPNDYKDRIDHYVYNQTGRHLMLKGNVGWSFIPW 70 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V K + + + I + ++ F PLL G + + + +D+ +N + Sbjct: 71 LGVDLKQVELSNPVGFQGENLANIGEIKIKVRFWPLLMGRVELDKITLDKATINLIKNKN 130 Query: 120 GVSNWFQ-----------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 G NW Q K + + + I+V I +I+Q+S L Sbjct: 131 GKDNWAQWSHSAVTKNNSKNTADNNKKMTAPVTELKIAGINVCNTTINLINQKSSSTTSL 190 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 +NL + P+S+ + T + ++ F T A + Sbjct: 191 KKINLTTGPIGNAVNFPVSM---------QFTLASNQSKNTFNATLTADADLNFQQSNYR 241 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L + + + L L + + ++ + L +L+G +I+ Sbjct: 242 LSNIKFNGTL-LRPTLPPVPVNIVTNLTANLNQQNISISPLNSKLANMQLNGKIEINQLQ 300 Query: 283 VRISRYKLQSILPNSST 299 R ++ N+ Sbjct: 301 -TTPRLSIKLGTANTDL 316 >gi|165923353|ref|ZP_02219690.1| AsmA family protein [Coxiella burnetii RSA 334] gi|165916679|gb|EDR35283.1| AsmA family protein [Coxiella burnetii RSA 334] Length = 502 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 110/317 (34%), Gaps = 30/317 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ ++ + L V + + ++ D+++ + G+ + +KG + +P+ Sbjct: 5 IKILVSVVAALLLVSTISVVVLTKLVNPNDYKDRIDHYVYNQTGRHLMLKGNVGWSFIPW 64 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V K + + + I + ++ F PLL G + + + +D+ +N + Sbjct: 65 LGVDLKQVELSNPVGFQGENLANIGEIKIKVRFWPLLMGRVELDKITLDKATINLIKNKN 124 Query: 120 GVSNWFQ-----------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 G NW Q K M + + + I+V I +I+Q+S L Sbjct: 125 GKDNWAQWSHSAVTKNNSKNTADNNKKMMAPVTELKIAGINVCNTTINLINQKSSSTTSL 184 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 +NL + P+S+ + T + ++ F T A + Sbjct: 185 KKINLTTGPIGNAVNFPVSM---------QFTLASNQSKNTFNATLTADADLNFQQSNYR 235 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L + + + L L + + ++ + L +L+G +I+ Sbjct: 236 LSNIKFNGTL-LRPTLPPVPVNIVTNLTANLNQQNISISPLNSKLANMQLNGKIEINQLQ 294 Query: 283 VRISRYKLQSILPNSST 299 R ++ N+ Sbjct: 295 -TTPRLSIKLGTANTDL 310 >gi|88811212|ref|ZP_01126468.1| hypothetical protein NB231_10428 [Nitrococcus mobilis Nb-231] gi|88791751|gb|EAR22862.1| hypothetical protein NB231_10428 [Nitrococcus mobilis Nb-231] Length = 700 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 44/388 (11%), Positives = 117/388 (30%), Gaps = 68/388 (17%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66 I + + +++++ V + +D D+R++ ER G+++A++G +K+ P+ + Sbjct: 2 IAITGVLTLLIIVITAVIVLVDPNDYRDEIERAVATQTGRELAMEGDLKLMFFPWIGLQV 61 Query: 67 KDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124 +++ + + + + + LPLL G + + + ++QP ++ + +G+ NW Sbjct: 62 NKVQLADAPGFGPAPFLQADHAQLALKLLPLLQGNLVLDTLMLNQPRVHLIRNEQGLGNW 121 Query: 125 FQRKSTMDMIHNV--------------------------ILEKIHVKGGRIKIIDQESDQ 158 L + ++ GR+ D++S Q Sbjct: 122 QTFGRPPQAPKRPPEQPAVDLEPGVQPQAQPLPAILQAASLAGLRIRDGRVTWDDRQSGQ 181 Query: 159 VYFLSDLNLQISARFLNIISPLSID---SIKGSVIAEGTG-------------------- 195 ++ LN L + D I + G Sbjct: 182 HVVITSLNTTAEDIRLGAPISIESDWQGQINDGMDIGGKLTGTVMADPQLQHFDARDLDL 241 Query: 196 -------NFDNKRSAFKITANFPAKNKAISLKI-QLFPLAYPIIIDLFGNLFWNEKQPIY 247 + + ++ A A + ++ +L A + I + + Sbjct: 242 ALNVAGVDIPGGKQQLRLRAQAAADLGQATYRLTELRLDAAGVQITGQLSAQQAKDAVTA 301 Query: 248 SGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN--------SST 299 +G + + + L + + + + + Sbjct: 302 TGQLQIPEFSPREVLQRLGMAVPNTDDPDVLKRASAQT-EFGYHGGALTIEPLTVRMDDS 360 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHD 327 + K+ +F + D Sbjct: 361 VLTGQAKLRNFTGPAADFDLSLNGIDVD 388 >gi|206560208|ref|YP_002230972.1| hypothetical protein BCAL1845 [Burkholderia cenocepacia J2315] gi|198036249|emb|CAR52145.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 770 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 67/209 (32%), Gaps = 16/209 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 + + + + +V++ A DW + Q + +G+ A+ G +K+ Sbjct: 7 IGKSAAWIVGIVAVLIAAAGVFLFTFDWNRAKPWVNEQVSAALGRPFAINGDLKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+PS + I + ++ LPLL+ EI + + + Sbjct: 67 DGETGWRAWVPWPSFSATQLEIGNPDWAKAPKFVTLDAAHFDLAILPLLAHEIVIPSIDV 126 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P ++ + G + W + V L+ G + D + ++ Sbjct: 127 VNPAVDLERRADGTNTWTFQFKQSSQPSRWKVRLDSFGFAKGTVTYRDAITKADLTIAID 186 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194 L +++ S S G Sbjct: 187 TLGQPIPLGDVLKEQEQTSRAASAQRVGK 215 >gi|213650203|ref|ZP_03380256.1| hypothetical protein SentesTy_24939 [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 483 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +D+ + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQESGWRSWVPWPHVHAEDVILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I GRI I D+ S + ++ + ++ Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206 Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236 + K + + G ++ + ++++ +Q + + G Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286 + K +GD L RL +V Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFNYR 326 Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344 + + + + L + DL + K+ Sbjct: 327 GFNGRIGDSD----IHGTFTYTTGKPSPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 + K Q K + + + F DK Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409 >gi|215919070|ref|NP_819951.2| AsmA family protein [Coxiella burnetii RSA 493] gi|206583955|gb|AAO90465.2| ASMA [Coxiella burnetii RSA 493] Length = 508 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 109/317 (34%), Gaps = 30/317 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ ++ + L V + + ++ D+++ + G+ + +KG + +P+ Sbjct: 11 IKILVSVVAALLLVSTISVVVLTKLVNPNDYKDRIDHYVYNQTGRHLMLKGNVGWSFIPW 70 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V K + + + I + ++ F PLL G + + + +D+ +N + Sbjct: 71 LGVDLKQVELSNPVGFQGENLANIGEIKIKVRFWPLLMGRVELDKITLDKATINLIKNKN 130 Query: 120 GVSNWFQ-----------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 G NW Q K + + + I+V I +I+Q+S L Sbjct: 131 GKDNWAQWSHSAVTKNNSKNTADNNKKMTAPVTELKIAGINVCNTTINLINQKSSSTTSL 190 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 +NL + P+S+ + T + ++ F T A + Sbjct: 191 KKINLTTGPIGNAVNFPVSM---------QFTLASNQSKNTFNATLTADADLNFQQSNYR 241 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L + + + L L + + ++ + L +L+G +I+ Sbjct: 242 LSNIKFNGTL-LRPTLPPVPVNIVTNLTANLNQQNISISPLNSKLTNMQLNGKIEINQLQ 300 Query: 283 VRISRYKLQSILPNSST 299 R ++ N+ Sbjct: 301 -TTPRLSIKLGTANTDL 316 >gi|167910677|ref|ZP_02497768.1| AsmA family protein [Burkholderia pseudomallei 112] Length = 262 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + +F+V+ DW + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P I I + ++ LPLL+ E+ + + + Sbjct: 67 DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 P L+ + G +NW V L G + D + + Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183 >gi|107029048|ref|YP_626143.1| AsmA [Burkholderia cenocepacia AU 1054] gi|116689793|ref|YP_835416.1| AsmA family protein [Burkholderia cenocepacia HI2424] gi|105898212|gb|ABF81170.1| AsmA [Burkholderia cenocepacia AU 1054] gi|116647882|gb|ABK08523.1| AsmA family protein [Burkholderia cenocepacia HI2424] Length = 765 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 36/244 (14%), Positives = 80/244 (32%), Gaps = 35/244 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 + + + + +V++ A DW + Q + +G+ A+ G +K+ Sbjct: 7 IGKSAAWIVGIVAVLIAAAGIFIFTFDWNRAKPWVNEQVSTALGRPFAINGDLKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+PS + I + ++ LPLL+ EI + + + Sbjct: 67 DGETGWRAWVPWPSFSATQLEIGNPDWAQAPKFVTLDAAHFDLALLPLLAHEIVIPSIDV 126 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P ++ + G + W + V L+ G + D ++ Sbjct: 127 VNPAVDLERRADGSNTWTFQFKQSSQPSRWKVRLDSFGFAKGTVTYRDA-------ITKA 179 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 +L ++ L PL G + ++++ +A K+ A L + Sbjct: 180 DLTVAIDTLGQPIPL------------GDVLKEQEQTSRAASAQRVGKHGAAQLGAKADA 227 Query: 226 LAYP 229 A Sbjct: 228 QAAS 231 >gi|212212616|ref|YP_002303552.1| AsmA [Coxiella burnetii CbuG_Q212] gi|212011026|gb|ACJ18407.1| AsmA [Coxiella burnetii CbuG_Q212] Length = 508 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 109/317 (34%), Gaps = 30/317 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ ++ + L V + + ++ D+++ + G+ + +KG + +P+ Sbjct: 11 IKILVSVVAALLLVSTISVVVLTKLVNPNDYKDRIDHYVYNQTGRHLMLKGNVGWSFIPW 70 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V K + + + I + ++ F PLL G + + + +D+ +N + Sbjct: 71 LGVDLKQVELSNPLGFQGENLANIGEIKIKVRFWPLLMGRVELDKITLDKATINLIKNKN 130 Query: 120 GVSNWFQ-----------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 G NW Q K + + + I+V I +I+Q+S L Sbjct: 131 GKDNWAQWSHSAVTKNNSKNTADNNKKMTAPVTELKIAGINVCNTTINLINQKSSSTTSL 190 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 +NL + P+S+ + T + ++ F T A + Sbjct: 191 KKINLTTGPIGNAVNFPVSM---------QFTLASNQSKNTFNATLTADADLNFQQSNYR 241 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L + + + L L + + ++ + L +L+G +I+ Sbjct: 242 LSNIKFNGTL-LRPTLPPVPVNIVTNLTANLNQQNISISPLNSKLANMQLNGKIEINQLQ 300 Query: 283 VRISRYKLQSILPNSST 299 R ++ N+ Sbjct: 301 -TTPRLSIKLGTANTDL 316 >gi|290473990|ref|YP_003466864.1| suppressor of ompF assembly mutants [Xenorhabdus bovienii SS-2004] gi|289173297|emb|CBJ80072.1| suppressor of ompF assembly mutants [Xenorhabdus bovienii SS-2004] Length = 619 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 49/387 (12%), Positives = 120/387 (31%), Gaps = 52/387 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R+L L L V++ G + + I+ DFR Q G + ++ ++ HI P Sbjct: 1 MKRLLTTLVILLVVIVAGLAALVVLINPNDFRSYIVEQVQKKSGYHLVLQDDLRWHIWPK 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ I + + E + + E LPLLS + V ++ + L F S+ Sbjct: 61 LSILTGQISLTASDAEIPAVVAENMRLDVELLPLLSHQFVVKEVMLKGAVLRFMPDSQPQ 120 Query: 122 SNWFQR---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + +I V + ++D + D+N + + Sbjct: 121 KQAEAPIAPKSDIQYPVAGGQGWKLDIARIKVADSLLVW-QTDTDSQLNIRDINFLMERK 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 D+ F N + A + YP + Sbjct: 180 DQ-----------------------DHVNLEFSSKINKNQQELAFEFNTSVDISDYPQRL 216 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + S + + G ++ +S ++ S ++ + + L Sbjct: 217 AAD----------VSSLKYQLKGVGVPSEGIK---GTGSVSLAYQSSPSSISLQKLALTV 263 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDD 350 + ++ + V + + + + D L + + + + ++ Sbjct: 264 ----NESELNGNIAVKLQNKPQYTINLSSPKLNLDNLLGWDALPQNDLQARHDYRIENSL 319 Query: 351 IQYSVNKKEEKDNSHDKENQENFSGDK 377 ++ + +++D + F + Sbjct: 320 LKPVIATSVSPLSNYDLSLLKAFEANL 346 >gi|78066539|ref|YP_369308.1| uncharacterized protein involved in outer membrane biogenesis, AsmA [Burkholderia sp. 383] gi|77967284|gb|ABB08664.1| uncharacterized protein involved in outer membrane biogenesis, AsmA [Burkholderia sp. 383] Length = 764 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 71/209 (33%), Gaps = 16/209 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 + + + + +V++ A DW + Q T +G+ A+ G +K+ Sbjct: 7 IGKSAAWIVGIVAVLIAAAGVFLFAFDWNRAKPWVNEQVTAALGRPFAINGDLKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+PS+ + I + ++ LPLL+ EI + + + Sbjct: 67 DGETGWRAWVPWPSLTATQLEIGNPDWAKTPKFVTLDAAHFDLAILPLLAHEIVIPSIDV 126 Query: 108 DQPHLNFYLSSKGVSNWFQR--KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P ++ + G + W + +S+ V L+ G + D + ++ Sbjct: 127 VNPAVDLERLADGRNTWTFQFKQSSQPSPWKVRLDSFGFAKGTVTYRDAITKADLSVAID 186 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194 L +++ S S G Sbjct: 187 TLGQPIPLGDVLKEQEQTSRAASAQRVGK 215 >gi|161830320|ref|YP_001596769.1| AsmA family protein [Coxiella burnetii RSA 331] gi|161762187|gb|ABX77829.1| AsmA family protein [Coxiella burnetii RSA 331] Length = 502 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 109/317 (34%), Gaps = 30/317 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ ++ + L V + + ++ D+++ + G+ + +KG + +P+ Sbjct: 5 IKILVSVVAALLLVSTISVVVLTKLVNPNDYKDRIDHYVYNQTGRHLMLKGNVGWSFIPW 64 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V K + + + I + ++ F PLL G + + + +D+ +N + Sbjct: 65 LGVDLKQVELSNPVGFQGENLANIGEIKIKVRFWPLLMGRVELDKITLDKATINLIKNKN 124 Query: 120 GVSNWFQ-----------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 G NW Q K + + + I+V I +I+Q+S L Sbjct: 125 GKDNWAQWSHSAVTKNNSKNTADNNKKMTAPVTELKIAGINVCNTTINLINQKSSSTTSL 184 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 +NL + P+S+ + T + ++ F T A + Sbjct: 185 KKINLTTGPIGNAVNFPVSM---------QFTLASNQSKNTFNATLTADADLNFQQSNYR 235 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L + + + L L + + ++ + L +L+G +I+ Sbjct: 236 LSNIKFNGTL-LRPTLPPVPVNIVTNLTANLNQQNISISPLNSKLTNMQLNGKIEINQLQ 294 Query: 283 VRISRYKLQSILPNSST 299 R ++ N+ Sbjct: 295 -TTPRLSIKLGTANTDL 310 >gi|82701212|ref|YP_410778.1| AsmA [Nitrosospira multiformis ATCC 25196] gi|82409277|gb|ABB73386.1| AsmA [Nitrosospira multiformis ATCC 25196] Length = 506 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 44/328 (13%), Positives = 98/328 (29%), Gaps = 34/328 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R L ++L G + + D ++ + R + + + G I + P P Sbjct: 9 RWAFFLFAGLTILLLGGIIYIFVIFDPNAYKPEIIRLVKEKKERMLRLDGPITLVFFPSP 68 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + + + + + IE + + E LPLL E+ + ++ I N S G + Sbjct: 69 GLKLSGLFLSEHNRDEEFATIEKVHVSLEILPLLRKELVLNEISITGLKANLIRFSDGST 128 Query: 123 NWFQ--RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 N R + ++H++ + D+ SD + ++ L A + + Sbjct: 129 NIDDLIRSEEQRERFRFDIGRVHMEKTLLAFRDEGSDTHFVFRNIGL--EADRADERADS 186 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 D+I+ V + + + L Sbjct: 187 EEDAIRSKVELAFNIAL-----------------------PEHAEVDIATRVRFHLTLNA 223 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 + +G+ A L + S +F G + + + N + Sbjct: 224 ERQYFALNGMNLAAEAQLPGTGRLLIQSRGNFSASFLEEGGELGADEFTFDVGIRNVDSS 283 Query: 301 EDNKTKVSQDEENLLNFSENGAESMHDL 328 + N ++ G + + D Sbjct: 284 FNI-------GVNAVHLGLKGQKVIADK 304 >gi|164685715|ref|ZP_01947125.2| AsmA family protein [Coxiella burnetii 'MSU Goat Q177'] gi|164601222|gb|EAX32251.2| AsmA family protein [Coxiella burnetii 'MSU Goat Q177'] Length = 502 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 109/317 (34%), Gaps = 30/317 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ ++ + L V + + ++ D+++ + G+ + +KG + +P+ Sbjct: 5 IKILVSVVAALLLVSTISVVVLTKLVNPNDYKDRIDHYVYNQTGRHLMLKGNVGWSFIPW 64 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V K + + + I + ++ F PLL G + + + +D+ +N + Sbjct: 65 LGVDLKQVELSNPVGFQGENLANIGEIKIKVRFWPLLMGRVELDKITLDKATINLIKNKN 124 Query: 120 GVSNWFQ-----------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 G NW Q K + + + I+V I +I+Q+S L Sbjct: 125 GKDNWAQWSHSAVTKNNSKNTADNNKKMTAPVTELKIAGINVCNTTINLINQKSSSTTSL 184 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 +NL + P+S+ + T + ++ F T A + Sbjct: 185 KKINLTTGPIGNAVNFPVSM---------QFTLASNQSKNTFNATLTADADLNFQQSNYR 235 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L + + + L L + + ++ + L +L+G +I+ Sbjct: 236 LSNIKFNGTL-LRPTLPPVPVNIVTNLTANLNQQNISISPLNSKLANMQLNGKIEINQLQ 294 Query: 283 VRISRYKLQSILPNSST 299 R ++ N+ Sbjct: 295 -TTPRLSIKLGTANTDL 310 >gi|170733135|ref|YP_001765082.1| AsmA family protein [Burkholderia cenocepacia MC0-3] gi|169816377|gb|ACA90960.1| AsmA family protein [Burkholderia cenocepacia MC0-3] Length = 765 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 67/209 (32%), Gaps = 16/209 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 + + + + +V++ A DW + Q + +G+ A+ G +K+ Sbjct: 7 IGKSAAWIVGIVAVLIAAAGIFIFTFDWNRAKPWVNEQVSTALGRPFAINGDLKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+PS + I + ++ LPLL+ EI + + + Sbjct: 67 DGETGWRAWVPWPSFSATQLEIGNPDWAQAPKFVTLDAAHFDLALLPLLAHEIVIPSIDV 126 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P ++ + G + W + V L+ G + D + ++ Sbjct: 127 VNPAVDLERRADGSNTWTFQFKQSSQPSRWKVRLDSFGFAKGTVTYRDAITKADLTVAID 186 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194 L +++ S S G Sbjct: 187 TLGQPIPLGDVLKEQEQTSRAASAQRVGK 215 >gi|114570401|ref|YP_757081.1| AsmA family protein [Maricaulis maris MCS10] gi|114340863|gb|ABI66143.1| AsmA family protein [Maricaulis maris MCS10] Length = 709 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 111/320 (34%), Gaps = 27/320 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R+ + LG + +++ AF +P I + +R+ E A + + + + G I + ILP Sbjct: 1 MKRLGLALGLIIVLLIAAAFILPSVIPTSTYRDPVETAARDALNRDVTLGGDISLQILPQ 60 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + ++ I + +++ + + +PLLS + + + + +P + + + Sbjct: 61 LQIRASEVSIANVDGFGDEAFAEMREMRVGLRLIPLLSRRVEITEFVLVEPTIRLAQNRR 120 Query: 120 GVSNWFQRKSTMDM-----------------IHNVILEKIHVKGGRIKIIDQESDQVYFL 162 G + F + ++ G + D + Sbjct: 121 GNNWTFTAPDADMAAPAPAADGGFVRGDGALPIEASFGDVRIENGALHFTDGSETRSITG 180 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN-----FDNKRSAFKITANFPAKNKAI 217 DLN+ + + ++++ S+ + F+ + + + + Sbjct: 181 LDLNIALPSLDTETRLTGALNADGESLSFTASIGSIRDFFEGRETPVSLGLGGNLAALSF 240 Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 +I L A ++ N+ ++G AGD + + + G Sbjct: 241 DGRI-LAGEAIAYDGEIDANIPSLRALAAFAGSPLPAGDNLEAFRAVGNLSGTP--GELA 297 Query: 278 ISDGNVRISRYKLQSILPNS 297 + +R+ Q+ L + Sbjct: 298 LQARTLRLDAISGQADLTVN 317 >gi|330817130|ref|YP_004360835.1| AsmA family protein [Burkholderia gladioli BSR3] gi|327369523|gb|AEA60879.1| AsmA family protein [Burkholderia gladioli BSR3] Length = 769 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 66/210 (31%), Gaps = 16/210 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 + + + + V++ L DW R + + +G+ A++G +K+ Sbjct: 7 IGKSAAWIVGIILVLITALVVFILTFDWNRARPYINERVSTEIGRPFAIQGDLKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+PS +I I + + ++ LPLL+ + + + I Sbjct: 67 SGETGWRAWIPWPSFTANNIVIGNPDWTKSPHFATLDAAHFDLAVLPLLAHRVVIPSIDI 126 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P L+ + G +NW V L G + D + ++ Sbjct: 127 VNPALDIERLADGRNNWTFSFKQSGEPSTWKVELHDFGFAKGTVTYRDAMTKADLNVAID 186 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTG 195 L ++ S S G Sbjct: 187 TLGQPIPLGEVLKQQEATSRAASAQRVGKA 216 >gi|126174217|ref|YP_001050366.1| AsmA family protein [Shewanella baltica OS155] gi|125997422|gb|ABN61497.1| AsmA family protein [Shewanella baltica OS155] Length = 607 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 109/307 (35%), Gaps = 25/307 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + L + +++L+ + +F D DF+ + G+++ + + P Sbjct: 1 MKFIKWLLALVVTLILLVTVYLTVFFDPNDFKPEIVDAVKKQTGRELVIADDLSWTFFPV 60 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + E + ++ +PL +I + ++ +D +N Sbjct: 61 IGINLGGVSLSNPEGFTPKAMLEVNKAVAEVALMPLFRQQIEIAELSLDGATINLVTRKN 120 Query: 120 GVSNW--------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 G S++ S+ ++++ + I + +I +ID+ Q + Sbjct: 121 GTSSFDGLSGDNSKKAATPAAETSSNAKLNDINIGGISITNTQINMIDEAKKQTQVFTLK 180 Query: 166 NLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221 + + L +P++ + +V +EG G R ++ N + + + Sbjct: 181 SFTLGEFALEQFAPIAFEFSATMPDMTVSSEGKGELKLSRDFTQLVVNGLKIDTVVEGE- 239 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL---NLELSAKKSRLSGNFKI 278 + I L + +++Q ++ + + K +++ +F++ Sbjct: 240 SIPNKKLETSISLATQIALDKQQLSVDIA-QLSAASITAAGKVGVNYATKIPQINADFQV 298 Query: 279 SDGNVRI 285 D ++ Sbjct: 299 GDIDLDT 305 >gi|150261057|ref|ZP_01917785.1| putative exported protein [Yersinia pestis CA88-4125] gi|167467306|ref|ZP_02332010.1| hypothetical protein YpesF_05292 [Yersinia pestis FV-1] gi|218930982|ref|YP_002348857.1| hypothetical protein YPO3987 [Yersinia pestis CO92] gi|229839688|ref|ZP_04459847.1| putative exported protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841771|ref|ZP_04461927.1| putative exported protein [Yersinia pestis biovar Orientalis str. India 195] gi|294504288|ref|YP_003568350.1| hypothetical protein YPZ3_2178 [Yersinia pestis Z176003] gi|115349593|emb|CAL22567.1| putative exported protein [Yersinia pestis CO92] gi|149290465|gb|EDM40542.1| putative exported protein [Yersinia pestis CA88-4125] gi|229691110|gb|EEO83163.1| putative exported protein [Yersinia pestis biovar Orientalis str. India 195] gi|229696054|gb|EEO86101.1| putative exported protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|294354747|gb|ADE65088.1| hypothetical protein YPZ3_2178 [Yersinia pestis Z176003] Length = 740 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 50/410 (12%), Positives = 108/410 (26%), Gaps = 91/410 (22%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 +VL+G + LV DW + ++ + + + A++G + + Sbjct: 6 KVLVGASGFILLSLVAVVIFVSSFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGE 65 Query: 58 ------ILPFPSVFFKDIRIDQKE-----------------------DGSFESKIEGLSM 88 +P+P + +D+ + ++ + Sbjct: 66 GPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSAQGTPLSDAFPTGEMVTLKRIDA 125 Query: 89 RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVK 145 L LLS E+R+ +++ QP ++ + G +NW ST +V + I Sbjct: 126 SLAPLSLLSKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSASWSVDIGDIIFD 185 Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI--------------- 190 G I + D Q L+ ++ A ++ + + SV Sbjct: 186 RGEITLKDAIL-QADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSVNTTTPVNTTT 244 Query: 191 ----------------------AEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPL 226 + G + + A + + +Q Sbjct: 245 ATATTNPVTETVKSTTPDYLFGWKVDGQYQGQPLAGSGKIGGMISMNDANVPFPLQADMR 304 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFK 277 ++ + G L ++G L L LS K Sbjct: 305 YGSTLVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLSARLK 364 Query: 278 ISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + G V + + + D L + + Sbjct: 365 QAGGAVYHYENFNGKIGDSDIHGDLT---YTDSQPRPKLAGQVDSEKLRF 411 >gi|254245349|ref|ZP_04938670.1| AsmA [Burkholderia cenocepacia PC184] gi|124870125|gb|EAY61841.1| AsmA [Burkholderia cenocepacia PC184] Length = 788 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 34/241 (14%), Positives = 79/241 (32%), Gaps = 35/241 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 + + + + +V++ A DW + Q + +G+ A+ G +++ Sbjct: 30 IGKSAAWIVGIVAVLIAAAGIFIFTFDWNRAKPWVNEQVSTALGRPFAINGDLRVGWRRP 89 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+PS + I + ++ LPLL+ EI + + + Sbjct: 90 DGETGWRAWVPWPSFSATQLEIGNPDWAQAPKFVTLDAAHFDLALLPLLAHEIVIPSIDV 149 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P ++ + G + W + V L+ G + D ++ Sbjct: 150 VNPAVDLERRADGSNTWTFQFKQSSQPSRWKVRLDSFGFAKGTVTYRDA-------ITKA 202 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 +L ++ L PL G + ++++ +A K+ A L + Sbjct: 203 DLAVAIDTLGQPIPL------------GDVLKEQEQTSRAASAQRVGKHGAAQLGAKADA 250 Query: 226 L 226 Sbjct: 251 Q 251 >gi|330807022|ref|YP_004351484.1| AsmA family protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375130|gb|AEA66480.1| Conserved hypothetical protein; putative AsmA family protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 743 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 51/432 (11%), Positives = 118/432 (27%), Gaps = 75/432 (17%) Query: 18 VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KED 76 F + D D++E+ + A ++ + G I + P+ + D + Sbjct: 21 ALGFALTHLFDPNDYKEEIRQIARDKAHIELTLNGDIGWSLFPWLGLELHDASVATLASP 80 Query: 77 GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---------- 126 + ++ L + +PLL E+++ D+ ++ +L G NW Sbjct: 81 TQPFADLQMLGLSVRVIPLLRREVQMSDVRVEGLNLRLNRDKNGHGNWEDIGKVPASAST 140 Query: 127 ------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 + ++ + V R++ D+++ +++ + L Sbjct: 141 ANAPAPVPAEQPTPPVSTPAEKPAQPTRLDIDSLTVNNARVEYTDEQTGKLFTAESIQLS 200 Query: 169 ISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNKAI 217 + P+++ + S G F+ + + + A + Sbjct: 201 TGPVHDSTNIPVTLTAFLSSNQPAVRVRTEVTGELRFERALKRYKFEDLKLSGEATGDPL 260 Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEK---------------------QPIYSGVFSVAGD 256 K F + +D N+ P +G S+A Sbjct: 261 QGKTLNFAAQGQLFLDKAANVAEWTGIKLSLNQLRALGELKVNDLDKTPQLNGGVSIAQF 320 Query: 257 FSKL----------LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 E S K LS + +V + ++ N + Sbjct: 321 DLAKFVDSVGQKLPAMAEGSLSKVELSSRIAGTPTSVEFNDINMKVDDSN----FSGRIA 376 Query: 307 VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHD 366 V + L D E + + + + + S Sbjct: 377 VEDFAKQSLRAQLKADTFNVDRYLAPKSAEADSSKAAREAEVSNTEASAMVGAGSTPLPS 436 Query: 367 KENQENFSGDKM 378 Q +S D++ Sbjct: 437 APTQGAWSNDRL 448 >gi|288576062|ref|ZP_05978114.2| AsmA family protein [Neisseria mucosa ATCC 25996] gi|288566315|gb|EFC87875.1| AsmA family protein [Neisseria mucosa ATCC 25996] Length = 710 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 44/390 (11%), Positives = 115/390 (29%), Gaps = 33/390 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ V+ + L +V + + G+ I I+ P Sbjct: 13 LKTVVTAVILLVCTAAALYASVYALFTPERIETTVQNAFSG-TGRNIRFSSDIRRSWFPR 71 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I + I+ + + L + + I + G Sbjct: 72 PTVTLKNVTITRPHSNQTALHIKETRIGLGWSSLWNDYPFIEKWVITGADAVLSRTDDGK 131 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII---S 178 N L ++ ++ + + + Q + + + L + + Sbjct: 132 WNLQDLLHPSHPT---SLNRLIIENSSLHMN--IAGQAHIIDNFYLNVRNDGADGRPFKI 186 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 S+ S+ +G+G F+ ++ + I + + + + D G Sbjct: 187 NGSLRRPNQSIQWQGSGVFNASKTGWSIP--------NLLWEASVAEKESKLSADGNGTW 238 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 W+ + + N L+A+ RLS + + + I Sbjct: 239 TWSSENDSLKADNLSLRTDNPAQNFHLTAQIPRLS----LKNNVLNIPSLNGAFTAGKPE 294 Query: 299 TDEDNKTKVSQDEEN-------LLNFSEN----GAESMHDLNETDFFEEEEKKNKNDDLK 347 + + K+ + F+ + ++ L +++ + ++ + Sbjct: 295 SQWNGSFKLDKASIRTSVATLDNFEFNASHKNAAHQTNLTLTGPLLWQQNKG-LQSSPIN 353 Query: 348 KDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 +Q +VN+ N++G + Sbjct: 354 LTTLQDTVNRLPNPRFISQLTGSFNWNGKE 383 >gi|22127713|ref|NP_671136.1| hypothetical protein y3842 [Yersinia pestis KIM 10] gi|45443099|ref|NP_994638.1| hypothetical protein YP_3350 [Yersinia pestis biovar Microtus str. 91001] gi|108809806|ref|YP_653722.1| hypothetical protein YPA_3815 [Yersinia pestis Antiqua] gi|108813797|ref|YP_649564.1| hypothetical protein YPN_3637 [Yersinia pestis Nepal516] gi|229836432|ref|ZP_04456599.1| putative exported protein [Yersinia pestis Pestoides A] gi|229904309|ref|ZP_04519420.1| putative exported protein [Yersinia pestis Nepal516] gi|270488083|ref|ZP_06205157.1| AsmA family protein [Yersinia pestis KIM D27] gi|21960834|gb|AAM87387.1|AE013988_1 hypothetical protein y3842 [Yersinia pestis KIM 10] gi|45437966|gb|AAS63515.1| Uncharacterized protein involved in outer membrane biogenesis [Yersinia pestis biovar Microtus str. 91001] gi|108777445|gb|ABG19964.1| hypothetical protein YPN_3637 [Yersinia pestis Nepal516] gi|108781719|gb|ABG15777.1| hypothetical protein YPA_3815 [Yersinia pestis Antiqua] gi|229678427|gb|EEO74532.1| putative exported protein [Yersinia pestis Nepal516] gi|229706500|gb|EEO92507.1| putative exported protein [Yersinia pestis Pestoides A] gi|262363691|gb|ACY60412.1| hypothetical protein YPD4_3508 [Yersinia pestis D106004] gi|262367625|gb|ACY64182.1| hypothetical protein YPD8_3514 [Yersinia pestis D182038] gi|270336587|gb|EFA47364.1| AsmA family protein [Yersinia pestis KIM D27] Length = 738 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 50/410 (12%), Positives = 108/410 (26%), Gaps = 91/410 (22%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 +VL+G + LV DW + ++ + + + A++G + + Sbjct: 6 KVLVGASGFILLSLVAVVIFVSSFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGE 65 Query: 58 ------ILPFPSVFFKDIRIDQKE-----------------------DGSFESKIEGLSM 88 +P+P + +D+ + ++ + Sbjct: 66 GPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSAQGTPLSDAFPTGEMVTLKRIDA 125 Query: 89 RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVK 145 L LLS E+R+ +++ QP ++ + G +NW ST +V + I Sbjct: 126 SLAPLSLLSKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSASWSVDIGDIIFD 185 Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI--------------- 190 G I + D Q L+ ++ A ++ + + SV Sbjct: 186 RGEITLKDAIL-QADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSVNTTTPVNTTT 244 Query: 191 ----------------------AEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPL 226 + G + + A + + +Q Sbjct: 245 ATATTNPVTETVKSTTPDYLFGWKVDGQYQGQPLAGSGKIGGMISMNDANVPFPLQADMR 304 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFK 277 ++ + G L ++G L L LS K Sbjct: 305 YGSTLVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLSARLK 364 Query: 278 ISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + G V + + + D L + + Sbjct: 365 QAGGAVYHYENFNGKIGDSDIHGDLT---YTDSQPRPKLAGQVDSEKLRF 411 >gi|78356075|ref|YP_387524.1| hypothetical protein Dde_1028 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218480|gb|ABB37829.1| Uncharacterized protein involved in outer membrane biogenesis-like protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 725 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 48/412 (11%), Positives = 125/412 (30%), Gaps = 67/412 (16%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR V + + LF+++ A D D++ R+ G+ + + G +++ + P+ Sbjct: 5 LRTVSVIILVLFALLAGAAGIFVATFDPNDYKSLITREVQKATGRTLVLTGTLELSLFPW 64 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + + E L + A PLL E+ + + + ++ + K Sbjct: 65 IGISTGPLLLGNPAGFGEDAFLRAEDLQLHARLRPLLHKELHIDRVVLSGVSVHLMRNVK 124 Query: 120 GVSNWFQRKSTMDMIH--------------------NVILEKIHVKGGRIKIIDQESDQV 159 G NW + + ++ + V+ ++ D ++ Sbjct: 125 GAPNWLFSPAGNALPPAGTDTAPSGASQAAAGAGLAAFSVQSVQVRDASVQYTDMQTGLA 184 Query: 160 YFLSDLNLQISARFLNIISPLSIDS--IKGSVIAEGTGNF-------------DNKRSAF 204 + ++L +A S +S++ + S +GT + ++ Sbjct: 185 AAATGISLTTTAIAPGRTSDISLEGNWLLTSPDMQGTASLTTRLELGETLETVTAADTSL 244 Query: 205 KITANFPA-----KNKAISLKIQLFPLAYPIIID----------LFGNLFWNEKQPIYSG 249 +ITA+ P+ + ++ + + L G + + + Sbjct: 245 RITASGPSVPSGRATLEAAGDLRFNMPDMTVTANGLRISTMDSTLTGTISADLMRNAVQA 304 Query: 250 VF--------SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 ++ L + +A + N + + + R + T Sbjct: 305 SIHAESPLRRTLEQLGMPLQLPDDTALALQADINLTAAADRLTVHRLTGRL----DKTAF 360 Query: 302 DNKTKVSQDEENLLNFSENGAESMHDL---NETDFFEEEEKKNKNDDLKKDD 350 + + F+ + D+ E E ++ K Sbjct: 361 SGNATLVPGVSPDIRFALAADKVNLDMYLPQEQSMKNAEPQQTGKSASGKPA 412 >gi|310765800|gb|ADP10750.1| AsmA family protein [Erwinia sp. Ejp617] Length = 684 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 100/357 (28%), Gaps = 40/357 (11%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQKE 75 DW + R+ + + + A++G + + +P+P V +DI + Sbjct: 30 DWNRLKPIINRKVSAEINRPFAIRGDLGVSWQRNRNEPGWHGWVPWPQVHAQDIMLGNPP 89 Query: 76 DGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ------- 126 D ++ + L LLS +I + + + QP ++ G +NW Sbjct: 90 DVPDVTMVHLQRVEATLSPLALLSQQIYLPRIALQQPQAKLVQTADGKNNWTFNLAGSDN 149 Query: 127 -RKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLNLQISARFLNIISPLSID 183 + S + L+ I G + D ++D + L + L Sbjct: 150 QQASKEPSAWSFRLDSIAFDRGTVSYRDAINKADVQVVVDPLGKAVPYAQLAGGDDKQKG 209 Query: 184 SIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + +G ++N++ + +++ + + + G + Sbjct: 210 AADFVFGWRASGTYNNEKLRGEGKIGGMLSLRSQNTPFPVAADVHNGTTRVRIAGTVQDP 269 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQ 291 +GD L L+ F+ DG V R + Sbjct: 270 MNLGGVDLRLRFSGDTLANLYGLTGVLLPETPPYETDGHLTARFQQPDGAVFRYQNFNGH 329 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDDLK 347 + L + + DL + + K K Sbjct: 330 IGDSDIRGSL---AYRQGKPRPELTGTLESLQLRVADLGPLIGVDSGKDSAKTARAK 383 >gi|304408604|ref|ZP_07390225.1| AsmA family protein [Shewanella baltica OS183] gi|307305432|ref|ZP_07585180.1| AsmA family protein [Shewanella baltica BA175] gi|304352425|gb|EFM16822.1| AsmA family protein [Shewanella baltica OS183] gi|306911735|gb|EFN42160.1| AsmA family protein [Shewanella baltica BA175] Length = 607 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 39/343 (11%), Positives = 120/343 (34%), Gaps = 25/343 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + L + +++L+ + +F D DF+ + G+++ + + P Sbjct: 1 MKFIKWLLALVVTLILLVTVYLTVFFDPNDFKAEIVDAVKKQTGRELVITDDLSWTFFPV 60 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + E + ++ +PL S +I + ++ +D +N Sbjct: 61 IGINLGGVSLSNPEGFTPKAMLEVNKAVAEVALMPLFSQQIEIAELSLDGATINLVTRKN 120 Query: 120 GVSNW--------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 G S++ S+ ++++ + I + +I +ID+ Q + Sbjct: 121 GTSSFDGLSGDNSKKAATPAAETSSNAKLNDINIGGISITNTQINMIDEAKKQTQVFTLK 180 Query: 166 NLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221 + + L +P++ + +V +EG G R ++ N + + + Sbjct: 181 SFTLGEFALEQFAPIAFEFSATMPDMTVSSEGKGELKLSRDFTQLVVNGLKIDTVVEGE- 239 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLL-NLELSAKKSRLSGNFKIS 279 + I L + +++Q + A + + + K +++ +F++ Sbjct: 240 SIPNKKLETSISLATQIALDKQQLSIDIAQLTAASITAAGKVGVNYATKIPQINADFQVG 299 Query: 280 DGNVR--ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320 D ++ + + + ++ + + L+ Sbjct: 300 DIDLDTLLPKTETAAVTEQAPAASTQAVEPDLSALKQLDVKLK 342 >gi|153000533|ref|YP_001366214.1| AsmA family protein [Shewanella baltica OS185] gi|151365151|gb|ABS08151.1| AsmA family protein [Shewanella baltica OS185] Length = 607 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 111/306 (36%), Gaps = 23/306 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + L + +++L+ + +F D DF+ + G+++ + + P Sbjct: 1 MKFIKWLLALVVTLILLVTVYLTVFFDPNDFKPEIVDAVKKQTGRELVIADDLSWTFFPV 60 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + E + ++ +PL S +I + ++ +D +N Sbjct: 61 IGINLGGVSLSNPEGFTPKAMLEVNKAVAEVALMPLFSQQIEIAELSLDGATINLVTRKN 120 Query: 120 GVSNW--------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 G +++ S+ ++++ + I + +I +ID+ Q + Sbjct: 121 GTNSFDGLSGDNSKKAATPAAETSSNAKLNDINIGGISITNTQINMIDEAKKQTQVFTLK 180 Query: 166 NLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221 + + L +P++ + +V +EG G R ++ N + + + Sbjct: 181 SFTLGEFALEQFAPIAFEFSATMPDMTVSSEGKGELKLSRDLTQLVVNGLKIDTVVEGE- 239 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLL-NLELSAKKSRLSGNFKIS 279 + I L + +++Q + A + + + K +++ +F++ Sbjct: 240 SIPNKKLETSISLATQIALDKQQLSVDIAQLNAASITAAGKVGVNYATKIPQINADFQVG 299 Query: 280 DGNVRI 285 D ++ Sbjct: 300 DIDLDT 305 >gi|300722473|ref|YP_003711761.1| suppressor of ompF assembly mutants [Xenorhabdus nematophila ATCC 19061] gi|297628978|emb|CBJ89563.1| suppressor of ompF assembly mutants [Xenorhabdus nematophila ATCC 19061] Length = 622 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 43/371 (11%), Positives = 113/371 (30%), Gaps = 52/371 (14%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS 78 G + + ++ DFR+ +Q G + ++ ++ H+ P S+ I + + Sbjct: 18 GLMALVMLVNPNDFRDYIVKQVQKKSGYHLVLQDELRWHVWPKLSILTGQISLTAQNAKQ 77 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----------RK 128 E + + E PLLS ++ V ++ + L S+ Sbjct: 78 PAVVAENMRLDVELFPLLSHQLSVKEVMLKGAVLRVTPDSQPQKRLEAPVAPESGFHYPM 137 Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188 + + + KI V + I + + D+NL ++ Sbjct: 138 VASNQPWKLDISKIRVVD-SLLIWQTSNHSQFNARDINLLLN------------------ 178 Query: 189 VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248 + D+ N + A L + YP I + S Sbjct: 179 -----RSDKDHINLEVSSKINRNQQELAFELNASMDTSDYPQQISADID----------S 223 Query: 249 GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308 + + G + ++ + ++ +V + + L N +D Sbjct: 224 FEYLLQGVGLPSVGIKGAGSAI---AKYQARSESVALQKIALTV---NEESDLKGDITAV 277 Query: 309 QDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHD 366 + + + ++ D L + + + + ++ + ++ + +++D Sbjct: 278 LKDRPQYSINLISSKLNLDNLLGWDNLPKNSPQAKHDYRIENNSLKPVIATSVSPLSNYD 337 Query: 367 KENQENFSGDK 377 + F+ + Sbjct: 338 LAFLQGFNANL 348 >gi|259910216|ref|YP_002650572.1| AsmA family protein [Erwinia pyrifoliae Ep1/96] gi|224965838|emb|CAX57371.1| AsmA family protein [Erwinia pyrifoliae Ep1/96] gi|283480326|emb|CAY76242.1| Uncharacterized protein yhjG [Erwinia pyrifoliae DSM 12163] Length = 684 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 100/357 (28%), Gaps = 40/357 (11%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQKE 75 DW + R+ + + + A++G + + +P+P V+ +DI + Sbjct: 30 DWNRLKPIINRKVSAEINRPFAIRGDLGVSWQRNRNEPGWHGWVPWPQVYAQDIMLGNPP 89 Query: 76 --DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ------- 126 ++ + L LLS +I + + + QP ++ G +NW Sbjct: 90 YVPDVTMVHLQRVEATLSPLALLSQQIYLPRIALQQPQAKLVQTADGKNNWTFNLAGSGN 149 Query: 127 -RKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLNLQISARFLNIISPLSID 183 + S + L+ I G + D ++D + L + L Sbjct: 150 QQASKEPSAWSFRLDSIAFDRGTVSYRDAINKADVQVVVDPLGKAVPYAQLAGGDDKQKG 209 Query: 184 SIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + +G ++N++ + +++ + + + G + Sbjct: 210 AADFVFGWRASGTYNNEKLRGEGKIGGMLSLRSQNTPFPVAADVHNGTTRVRIAGTVQDP 269 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQ 291 +GD L L+ F+ DG V R + Sbjct: 270 MNLGGVDLRLRFSGDTLANLYGLTGVLLPETPPYETDGHLTARFQQPDGAVFRYQNFNGH 329 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDDLK 347 + L + + DL + + K K Sbjct: 330 IGDSDIRGSL---AYRQGKPRPELTGTLESLQLRVADLGPLIGVDSGKDSAKTARAK 383 >gi|117923475|ref|YP_864092.1| AsmA family protein [Magnetococcus sp. MC-1] gi|117607231|gb|ABK42686.1| AsmA family protein [Magnetococcus sp. MC-1] Length = 794 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 60/381 (15%), Positives = 130/381 (34%), Gaps = 36/381 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++LI L L +V+V +PLF+D + + + G+ +++ G + + + P+ Sbjct: 1 MKKLLIALISLIVLVIVVLVAIPLFVDPNEHKPLIAEKVHEATGRTLSLNGNLHLSLFPW 60 Query: 62 PSVFFKDIRIDQKED---GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 V + + D G K+ + +R + +PLLS ++ V + ID + Sbjct: 61 AGVTIEAAELGNPADIGVGQAMVKLNKVDVRVKLMPLLSKQVVVDRIIIDGLEAHLIRDK 120 Query: 119 KGVSNWFQRK-----------------------STMDMIHNVILEKIHVKGGRIKIIDQE 155 G NW + + + L + + ++ D++ Sbjct: 121 HGKDNWSDLSGGGKGAQTDTAAPQAGGTNQEKAAGSSPLAGLSLGGVEISNAKVSFRDEQ 180 Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215 +D V L+ LNL A L L++D+ G G + F A + Sbjct: 181 ADLVASLNPLNLATGAVALGQPVDLTLDAKLAKRSISGKGEALDVGVQFSGQLQPAADMQ 240 Query: 216 AISLKIQLFPLAYPIII----DLFGNLFWNEKQPIYSGVFSVAGDFS---KLLNLELSAK 268 ++ L + + L + + G ++ + + EL Sbjct: 241 SLLLNGMKLMIETTAKGLPVTKVQTQLSADVAVDLKGGTVKISRNKLAIEAEGSPELGMD 300 Query: 269 KSR--LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 R L+G+ ++ + I L + + V L + Sbjct: 301 TVRAALTGSIGVNLEPLTIEISGLDLTVQGNGGKLPG-GSVDLHMAADLLANMAAGTVGV 359 Query: 327 DLNETDFFEEEEKKNKNDDLK 347 + FE++ K + + D+ Sbjct: 360 KNLRLEGFEQQLKASGDVDVS 380 >gi|171319684|ref|ZP_02908775.1| AsmA family protein [Burkholderia ambifaria MEX-5] gi|171095064|gb|EDT40075.1| AsmA family protein [Burkholderia ambifaria MEX-5] Length = 723 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 24/209 (11%), Positives = 66/209 (31%), Gaps = 16/209 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 + + + + ++++ DW + + +G+ A+ G +++ Sbjct: 7 IGKSAAWIVGIVALIIAATGVFIFTFDWNHAKPWVNEHVSTALGRSFAINGDLRVDWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P + + + G ++ LPL + +I + + + Sbjct: 67 QGETGWRAWVPWPRFSATQLEMGNPDWAKGPKFVTLDAAHFDLAILPLFTHQIVIPSIDV 126 Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P ++ + G + W ++S + L+ G I D + ++ Sbjct: 127 VNPAVDLERLADGRNTWTFEFKQSGQPSPWKLRLDSFAFAKGTIVYRDAITKADLTIAVD 186 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194 L +++ S S G Sbjct: 187 TLGHPIPIGDVLKEQEQTSRAASAQHVGK 215 >gi|254189021|ref|ZP_04895532.1| AsmA family protein [Burkholderia pseudomallei Pasteur 52237] gi|157936700|gb|EDO92370.1| AsmA family protein [Burkholderia pseudomallei Pasteur 52237] Length = 830 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + +F+V+ DW + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P I I + ++ LPLL+ E+ + + + Sbjct: 67 DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 P L+ + G +NW V L G + D + + Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183 >gi|167918706|ref|ZP_02505797.1| AsmA family protein [Burkholderia pseudomallei BCC215] Length = 830 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + +F+V+ DW + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P I I + ++ LPLL+ E+ + + + Sbjct: 67 DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 P L+ + G +NW V L G + D + + Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183 >gi|53723550|ref|YP_102969.1| AsmA family protein [Burkholderia mallei ATCC 23344] gi|67641313|ref|ZP_00440094.1| AsmA family protein [Burkholderia mallei GB8 horse 4] gi|76809968|ref|YP_333714.1| AsmA family protein [Burkholderia pseudomallei 1710b] gi|121601111|ref|YP_993115.1| AsmA family protein [Burkholderia mallei SAVP1] gi|124385936|ref|YP_001026108.1| AsmA family protein [Burkholderia mallei NCTC 10229] gi|126442300|ref|YP_001059186.1| AsmA family protein [Burkholderia pseudomallei 668] gi|126450741|ref|YP_001080621.1| AsmA family protein [Burkholderia mallei NCTC 10247] gi|167002503|ref|ZP_02268293.1| AsmA family protein [Burkholderia mallei PRL-20] gi|254177677|ref|ZP_04884332.1| AsmA family protein [Burkholderia mallei ATCC 10399] gi|254199914|ref|ZP_04906280.1| AsmA family protein [Burkholderia mallei FMH] gi|254206246|ref|ZP_04912598.1| AsmA family protein [Burkholderia mallei JHU] gi|254258265|ref|ZP_04949319.1| AsmA family protein [Burkholderia pseudomallei 1710a] gi|52426973|gb|AAU47566.1| AsmA family protein [Burkholderia mallei ATCC 23344] gi|76579421|gb|ABA48896.1| AsmA family protein [Burkholderia pseudomallei 1710b] gi|121229921|gb|ABM52439.1| AsmA family protein [Burkholderia mallei SAVP1] gi|124293956|gb|ABN03225.1| AsmA family protein [Burkholderia mallei NCTC 10229] gi|126221793|gb|ABN85299.1| AsmA family protein [Burkholderia pseudomallei 668] gi|126243611|gb|ABO06704.1| AsmA family protein [Burkholderia mallei NCTC 10247] gi|147749510|gb|EDK56584.1| AsmA family protein [Burkholderia mallei FMH] gi|147753689|gb|EDK60754.1| AsmA family protein [Burkholderia mallei JHU] gi|160698716|gb|EDP88686.1| AsmA family protein [Burkholderia mallei ATCC 10399] gi|238522224|gb|EEP85670.1| AsmA family protein [Burkholderia mallei GB8 horse 4] gi|243061838|gb|EES44024.1| AsmA family protein [Burkholderia mallei PRL-20] gi|254216954|gb|EET06338.1| AsmA family protein [Burkholderia pseudomallei 1710a] Length = 830 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + +F+V+ DW + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P I I + ++ LPLL+ E+ + + + Sbjct: 67 DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 P L+ + G +NW V L G + D + + Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183 >gi|329297874|ref|ZP_08255210.1| AsmA family protein [Plautia stali symbiont] Length = 656 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 46/384 (11%), Positives = 107/384 (27%), Gaps = 38/384 (9%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + + + + + A++G + + + +P V D+ +D Sbjct: 28 TFDWNRRKPTINQNVSAELNRPFAIRGDLGVAWVRNREEPGWRSWVLWPQVHADDVMLDN 87 Query: 74 KE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 ++ + L LL EI + + + QP ++ +NW Sbjct: 88 PPSVPEVTMVHLQRVEATLAPLALLHKEIYLPWIKMQQPDARLVQTADKKNNWTFNLASS 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I G+++ D + + L + + Sbjct: 148 ENSDPNAPPSAWSFRLDNILFDQGQLRYRDAINKADVTVKINPLGKPVPYAQVAGGNDQQ 207 Query: 184 SIKGSVI--AEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 G + + +G ++N++ +++ +QL + + G L Sbjct: 208 KGAGDFVFGWQASGTYNNQKLDGDGKIGGMLSLRSRTTQFPLQLDVRNGTTRVRVDGTLQ 267 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP---- 295 +GD L L + I+R+ + Sbjct: 268 DPLNLGGLDVRLRFSGDTLANLYGLTGVTGVLLPDTPQYETDGHLIARFNEEKGPLFRYE 327 Query: 296 -----NSSTDEDNKTKVSQD-EENLLNFSENGAES-MHDLNETDFFEEEEKKNKNDDLKK 348 +D Q + + M DL K ++ K Sbjct: 328 KFNGHIGDSDIHGSLSYRQGKPRPTRSGELTSNQLRMADLGPLIGVN-SGKSSEKTAQAK 386 Query: 349 DDIQYSVNKKEEKDNSHDKENQEN 372 + + ++ HDK + +N Sbjct: 387 AQRGEASTQPADRVLPHDKFDTKN 410 >gi|33603127|ref|NP_890687.1| hypothetical protein BB4152 [Bordetella bronchiseptica RB50] gi|33568758|emb|CAE34516.1| exported protein, conserved [Bordetella bronchiseptica RB50] Length = 702 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 44/394 (11%), Positives = 98/394 (24%), Gaps = 55/394 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQ 73 +DW + +A+ +G+ A++G + + +P+P D+ I Sbjct: 28 TLDWNRLKPTINERASAALGRPFAIQGDLSVQWAREPGQGGWRGWVPWPHFVVHDVAIAN 87 Query: 74 KEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--RKS 129 + R LPLL + + + + + + GV+NW + Sbjct: 88 AVWARDSNLLTLRRGEFRLAPLPLLRQRVVIRRIQLSGLRADLQRRADGVANWEFTMPDT 147 Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL-----------------------SDLN 166 V ++ I G I+ D + + +D Sbjct: 148 GEPSPWKVDIDAIGFDQGAIRYADAIAQADLDVLVDPLGKPVPFAELAGAPAGDGAADQA 207 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLF 224 + + + + G + ++ +Q Sbjct: 208 AGGADSGKPADAAALAAPPDYAFGWQVNGRYKELPLEGTGKVGGMLALRDARQPFPVQAE 267 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGN 275 +++ G L +AG L RL Sbjct: 268 VAIGSTKVEVVGTLTDPMSLGALDLRLKLAGASMANLYPLTGVTLPDTPPYSTDGRLVAR 327 Query: 276 FK-ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES-MHDLNETDF 333 + + + + T Q L+ + M DL Sbjct: 328 LQDPQGARFEYRDFNGKVGASD---LHGGITFALQQPRPRLSGKLSSRLLRMADLGPLIG 384 Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + K+ + +K Q + ++ D+ Sbjct: 385 VQSGGAKSVKAEGEKAVAQPADKVLPVQEFRTDR 418 >gi|237812510|ref|YP_002896961.1| AsmA family protein [Burkholderia pseudomallei MSHR346] gi|237506754|gb|ACQ99072.1| AsmA family protein [Burkholderia pseudomallei MSHR346] Length = 830 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + +F+V+ DW + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P I I + ++ LPLL+ E+ + + + Sbjct: 67 DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 P L+ + G +NW V L G + D + + Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183 >gi|167902436|ref|ZP_02489641.1| AsmA family protein [Burkholderia pseudomallei NCTC 13177] gi|217421613|ref|ZP_03453117.1| AsmA family protein [Burkholderia pseudomallei 576] gi|217395355|gb|EEC35373.1| AsmA family protein [Burkholderia pseudomallei 576] Length = 824 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + +F+V+ DW + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P I I + ++ LPLL+ E+ + + + Sbjct: 67 DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 P L+ + G +NW V L G + D + + Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183 >gi|254198412|ref|ZP_04904834.1| AsmA family protein [Burkholderia pseudomallei S13] gi|169655153|gb|EDS87846.1| AsmA family protein [Burkholderia pseudomallei S13] Length = 830 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + +F+V+ DW + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P I I + ++ LPLL+ E+ + + + Sbjct: 67 DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 P L+ + G +NW V L G + D + + Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183 >gi|119775022|ref|YP_927762.1| AsmA protein [Shewanella amazonensis SB2B] gi|119767522|gb|ABM00093.1| AsmA protein [Shewanella amazonensis SB2B] Length = 604 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 27/266 (10%), Positives = 80/266 (30%), Gaps = 15/266 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + + ++ ++ + L D DF+ G+ + ++ + P Sbjct: 1 MKLIKWIFAGIAAIAVLVVLYITLIFDPNDFKPMLVDAVKEQTGRDLVIEEPLSWQFFPS 60 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + E ++ + + LPLLS ++++ + +D L + + Sbjct: 61 IGIRLAGVSLSNPEGFKEAHMMAVKEVVAEVKLLPLLSRDVQIDQLRLDGAKLTLVTTKQ 120 Query: 120 GVSNWFQRKSTMDMIHN------------VILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 G S+ + + I++ I +ID+ + + +L Sbjct: 121 GKSSLDGLTGNTTSADKPADVKQGPGLNAISIGGINISDTSITLIDEAAGSSQTFTLSSL 180 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 + +PL+ + G + + + + + Q L Sbjct: 181 TLGEFTPGKAAPLAFAFGADLPDMKVKGEGEATLTVSEAFNALSLVGLNLEVNAQGNSLP 240 Query: 228 -YPIIIDLFGNLFWNEKQPIYSGVFS 252 + ++ G + Sbjct: 241 KGAVTVEFAGGADVALEAKTAKLTVD 266 >gi|53719181|ref|YP_108167.1| hypothetical protein BPSL1547 [Burkholderia pseudomallei K96243] gi|126454124|ref|YP_001066452.1| AsmA family protein [Burkholderia pseudomallei 1106a] gi|242316223|ref|ZP_04815239.1| AsmA family protein [Burkholderia pseudomallei 1106b] gi|254179590|ref|ZP_04886189.1| AsmA family protein [Burkholderia pseudomallei 1655] gi|52209595|emb|CAH35548.1| putative membrane protein [Burkholderia pseudomallei K96243] gi|126227766|gb|ABN91306.1| AsmA family protein [Burkholderia pseudomallei 1106a] gi|184210130|gb|EDU07173.1| AsmA family protein [Burkholderia pseudomallei 1655] gi|242139462|gb|EES25864.1| AsmA family protein [Burkholderia pseudomallei 1106b] Length = 824 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + +F+V+ DW + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P I I + ++ LPLL+ E+ + + + Sbjct: 67 DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 P L+ + G +NW V L G + D + + Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183 >gi|24374109|ref|NP_718152.1| asmA protein [Shewanella oneidensis MR-1] gi|24348599|gb|AAN55596.1|AE015698_4 asmA protein [Shewanella oneidensis MR-1] Length = 606 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 42/345 (12%), Positives = 119/345 (34%), Gaps = 21/345 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + L L + V+ + +F D DF+ + G+++ + + P Sbjct: 1 MTFIKWLLVILVTFVVAVTLYLTVFFDPNDFKPEVVNAVKKQTGRELVITEDLSWTFFPT 60 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + E + ++ E +PL S +I + + +D +N Sbjct: 61 VGINLGGVSLSNPEGFTPKSMLEVHKAVAEVELMPLFSKQIEIVQLSLDGAKINLVTRKN 120 Query: 120 GVSNWF--------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 G S++ + + + ++ + + + +I +ID+ Q ++ Sbjct: 121 GSSSFDGLTGSTADKSSTPSEPSLSQAKLASIDVGGVSITNTQINLIDEAKGQTQTVTLK 180 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 + A L+ +P++ + + + + + I+ +++ Sbjct: 181 QFTLGAFSLDKFAPIAYELTASLPDMTLSSKGEGQIKLSHDFNQLVIEKLDIATQVEGDA 240 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK-KSRLSGNFKISDGNVR 284 + + L + N + + S + + ++ + K +G + N++ Sbjct: 241 IPHK---KLTAEVSVNSQIALDKKQLSADINKFAVEDISATGKLAVHYAGKVPQINANLQ 297 Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE-NGAESMHDL 328 + L ++LP S T E + + + + NG ++ L Sbjct: 298 LGDIDLDALLPKSDTAEKQPIASTSSQAIEPDLTALNGLDARLTL 342 >gi|226197502|ref|ZP_03793079.1| AsmA family protein [Burkholderia pseudomallei Pakistan 9] gi|225930881|gb|EEH26891.1| AsmA family protein [Burkholderia pseudomallei Pakistan 9] Length = 824 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + +F+V+ DW + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P I I + ++ LPLL+ E+ + + + Sbjct: 67 DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 P L+ + G +NW V L G + D + + Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183 >gi|146279133|ref|YP_001169292.1| AsmA family protein [Rhodobacter sphaeroides ATCC 17025] gi|145557374|gb|ABP71987.1| AsmA family protein [Rhodobacter sphaeroides ATCC 17025] Length = 675 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 89/289 (30%), Gaps = 31/289 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R ++ + LF + + + + E RQ G+ + + G ++ + P Sbjct: 19 MRWLIRLVAVLFGL-VALFLVALVLVPRDRLAELAVRQFEAATGRAMTISGEVRPSVWPK 77 Query: 62 PSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V + I G + L + + L L+ G R+ + +D+P + ++ Sbjct: 78 LGVRTGPVTIANAPWAAGEPLLEARALEIGLDTLALMGGSWRISRVALDEPVIRLERDAE 137 Query: 120 GVSNWF----------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 G +NW + + L++ V GGR+ ID + + +S Sbjct: 138 GRANWDLSRPAAADPAPEADPSPATAAGSAVSPFTLDEGIVTGGRVLWIDHGTGRRGDIS 197 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 + +++ + L++ G + SA ++L Sbjct: 198 GVQARVTLPESGGPADLTLSGQANGRGFAVEGRLEEAGSALAGRVAP----------LRL 247 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 I G P+ G A L + L Sbjct: 248 SLATGSARITFEGEAG--SAPPMADGRIDAALGDLGDLAALFGRPRPEL 294 >gi|134277286|ref|ZP_01764001.1| AsmA family protein [Burkholderia pseudomallei 305] gi|134250936|gb|EBA51015.1| AsmA family protein [Burkholderia pseudomallei 305] Length = 831 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 L + + +F+V+ DW + QA+ +G+ ++G IK+ Sbjct: 7 LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P I I + ++ LPLL+ E+ + + + Sbjct: 67 DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 P L+ + G +NW V L G + D + + Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183 >gi|91783495|ref|YP_558701.1| putative transmembrane protein, AsmA-like [Burkholderia xenovorans LB400] gi|91687449|gb|ABE30649.1| Putative transmembrane protein, AsmA-like protein [Burkholderia xenovorans LB400] Length = 839 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 76/210 (36%), Gaps = 16/210 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 + +++ L + +++V L DW R + T +G+ A+ G +K+ Sbjct: 11 IGKIIAWLVAIIVILIVALTIFILTFDWNRARPYINDKVTQAIGRPFAINGDLKVGWRHP 70 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P +I + + + ++ + + + LPLL+ +I + + + Sbjct: 71 VGETGWRGWVPWPRFSAANITVGNPDWTKQPQFATLDEIDFQVKVLPLLTHDIVIPAINL 130 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P ++ G +NW + ++ + L I G I + DQ+ + Sbjct: 131 VNPSVDLERLLDGRNNWTFKLASSGGPSEWKLDLHDIAFAKGNIALSDQQKKVDLQMVVD 190 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTG 195 L + + S S A G Sbjct: 191 TLGQPIPIGEAMKQQEVASRSASAEAIGKA 220 >gi|45441240|ref|NP_992779.1| putative assembly protein [Yersinia pestis biovar Microtus str. 91001] gi|45436100|gb|AAS61656.1| putative exported protein [Yersinia pestis biovar Microtus str. 91001] Length = 584 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 32/358 (8%), Positives = 97/358 (27%), Gaps = 58/358 (16%) Query: 36 FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95 +Q G + ++G ++ H+ P S+ + + E + + + PL Sbjct: 1 MVKQVEKKSGYHLQLEGDLRWHVWPQLSIIAGRMALTAPGALEPVVSAENMRLDVKLWPL 60 Query: 96 LSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR----------KSTMDMIHNVILEKIHVK 145 LS ++ V + + + S+ + + + + ++ + Sbjct: 61 LSHQLDVKQVMLKGAVIRLTPDSEAQQQIDAPVAPIAPAGSTPVSDNRGWTLDINRLQIA 120 Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK 205 + ++DQ + D+NL++ + Sbjct: 121 DSLLIWQRSDNDQ-INVRDINLELKQGGQR-----------------------QVQVTLA 156 Query: 206 ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 N ++ S+ I YP I + + G + Sbjct: 157 SRVNRNQRDLTFSMVIDADMHQYPRQFSAN----------ISQFTYKLEGADIPAGGISG 206 Query: 266 SAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 L +++ + +++ + ++ K + + + Sbjct: 207 GG---ALEASYQSDIQQLLLNQLNFTA----NNNQLAGSVKATFGDVPDYVVNLTSDNLN 259 Query: 326 HDLNETDFFEEEEKKNKNDDLKKDDIQYSV---NKKEEKDNSHDKENQENFSGDKMIL 380 D F + K + + + + + D + + +F+ ++ Sbjct: 260 LD----AIFGWQPKSSTASTDEAKQPVTTAPVIAIQIDDDVGQNLQALRDFTAQTTVV 313 >gi|209695665|ref|YP_002263594.1| putative outer membrane assembly protein [Aliivibrio salmonicida LFI1238] gi|208009617|emb|CAQ79913.1| putative outer membrane assembly protein [Aliivibrio salmonicida LFI1238] Length = 719 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 51/390 (13%), Positives = 120/390 (30%), Gaps = 69/390 (17%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 +++++ + F +++ + L ++ F+ + Q G+++ + G I P Sbjct: 6 KKIVLLISIPFIAIVIALLVLVLVVNPNQFKPLIKEQVEQQTGRQLTMDGDISWRFFPSI 65 Query: 63 SVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 ++ + + K + ++ LPL EI + + +D + G Sbjct: 66 GFSIGNMALSNPTGFATANLVKFDNANIDINVLPLFDHEINIGLITLDGAAFTLHTLKSG 125 Query: 121 VSNW--------------------------------FQRKSTMDMIHNVILEKIHVKGGR 148 V+N + V LE I + Sbjct: 126 VTNLDGIGPKEEISVAENKTEIKNEDVTTSDNLNAEAATTAPEINSWTVSLEGIALTNAS 185 Query: 149 IKIIDQESDQVYFLSDLNLQISARFLNI----ISPLSIDSIKGSVIAEGTGNFDNKRSAF 204 I D ++ LS++N+++S L D + + +G + + ++ Sbjct: 186 ALIQDDKAGTKTQLSNMNIKLSQFSPGEWTHLTFDLKADLGQQKIALKGETDLNIAKTLD 245 Query: 205 KIT----------ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254 + A+ K I+L+I F ++L N+ F + Sbjct: 246 TASLKETELVVSYADKTNKFDGITLRIDKFNFDEWSTLELVAAGKANDMTVDSKSTFELN 305 Query: 255 ----------GDFSKLLNLELSAKKSR-------LSGNFKISDGNVRISRYKLQSILPNS 297 F N+ A ++ + +F ++ ++++ L ++ Sbjct: 306 VPKALDIIKIRKFISTNNVIGDALPNKDVTAIIGFNSSFDVTKSLLQVTDLTLSAV---- 361 Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHD 327 T D K V + F + D Sbjct: 362 DTQFDGKASVELKGIPKVRFELHSPSIDVD 391 >gi|204928682|ref|ZP_03219881.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322115|gb|EDZ07313.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|322613997|gb|EFY10933.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617889|gb|EFY14782.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625496|gb|EFY22322.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629961|gb|EFY26734.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632150|gb|EFY28901.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636500|gb|EFY33207.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643134|gb|EFY39708.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644645|gb|EFY41181.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651331|gb|EFY47715.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652753|gb|EFY49092.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659054|gb|EFY55306.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663244|gb|EFY59448.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668730|gb|EFY64883.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674466|gb|EFY70559.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678327|gb|EFY74388.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682415|gb|EFY78436.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684129|gb|EFY80135.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192315|gb|EFZ77547.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196257|gb|EFZ81409.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201405|gb|EFZ86471.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206485|gb|EFZ91446.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212077|gb|EFZ96904.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216982|gb|EGA01705.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220347|gb|EGA04801.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323228324|gb|EGA12455.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233409|gb|EGA17502.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237130|gb|EGA21197.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243655|gb|EGA27671.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246101|gb|EGA30088.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250881|gb|EGA34759.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257626|gb|EGA41312.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261833|gb|EGA45400.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266110|gb|EGA49601.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268654|gb|EGA52121.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 686 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 46/393 (11%), Positives = 108/393 (27%), Gaps = 52/393 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +D+ + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I GRI I D+ S + ++ + ++ Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-IDPLGKPLPFSEVTGTKGK 206 Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236 + K S + G ++ + +++++ +Q + + G Sbjct: 207 ADKSSVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESMPFPVQADFRSGNTRVAFSG 266 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286 + K +GD L RL +V Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326 Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344 + + + + L + DL + K+ Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 + K Q K + + + F DK Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409 >gi|160875170|ref|YP_001554486.1| AsmA family protein [Shewanella baltica OS195] gi|160860692|gb|ABX49226.1| AsmA family protein [Shewanella baltica OS195] gi|315267364|gb|ADT94217.1| AsmA family protein [Shewanella baltica OS678] Length = 607 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 112/306 (36%), Gaps = 23/306 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + L + +++L+ + +F D DF+ + G+++ + + P Sbjct: 1 MKLIKWLLALVVTLILLVTVYLTVFFDPNDFKPEIVDAVKKQTGRELVIADDLSWTFFPV 60 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + E + ++ +PL S +I + ++ +D +N Sbjct: 61 IGINLGGVSLSNPEGFTPKAMLEVNKAVAEVALMPLFSQQIEIAELSLDGATINLVTRKN 120 Query: 120 GVSNW--------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 G S++ S+ ++++ + I + +I +ID+ Q + Sbjct: 121 GTSSFDGLSGDNSKKAATPAAETSSNAKLNDINIGGISITNTQINMIDEAKKQTQVFTLK 180 Query: 166 NLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221 + + L +P++ + +V +EG G R ++ N + + + Sbjct: 181 SFTLGEFALEQFAPIAFEFSATMPDMTVSSEGKGELKLSRDFTQLVVNGLKIDTVVEGE- 239 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLL-NLELSAKKSRLSGNFKIS 279 + I+L + +++Q + A + + + K +++ +F++ Sbjct: 240 SIPNKKLETSINLATQIALDKQQLSVDIAQLTAASITAAGKVGVNYATKIPQINADFQVG 299 Query: 280 DGNVRI 285 D ++ Sbjct: 300 DIDLDT 305 >gi|145300461|ref|YP_001143302.1| asmA protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142853233|gb|ABO91554.1| asmA protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 719 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 46/386 (11%), Positives = 113/386 (29%), Gaps = 64/386 (16%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++++ L L LV + ID +F+ Q G+++ ++G I P Sbjct: 1 MKKIIYILLGLALAALVIITALVKLIDPNEFKPQLVEQVRKSTGRELVMEGDIGWRFWPS 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + + + E LPLLS + + ++ + HL + Sbjct: 61 LGLSLERVALRNPAGFAEPDLVRFERGDASVAVLPLLSHRLDIGEVTLTGAHLFIQTRAD 120 Query: 120 GVSNW--------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159 G SN Q ++ + L+ + ++ + D + + Sbjct: 121 GSSNLNDLVKTPEAAKDSEPAPGGQSQPPASNGQTWQITLQGVVLEQASALVQDDRNGTL 180 Query: 160 YFLS----------------------------DLNLQISARFLNIISPLSIDSIKGSVIA 191 L L I ++ ++ S ++ Sbjct: 181 SRLDQLDLALALGQLTPGQWVPVTLAAKGAQGKLAFDIKGEGEVKLAQDALASELKNLSL 240 Query: 192 EGTGNFDNKRS-AFKITANFPAKNKAISLKIQLFPLA-------YPIIIDLFGNLFWNEK 243 G+ + +R +F + A+ A + SL + L ++ ++ Sbjct: 241 SGSLSQPQQRLDSFSVKADRLALGEWSSLTLNLQGAQLEGDQPTLAGSLEGTLKARVDKG 300 Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRISRYKLQSILPNSSTDE 301 + + + L +L+G ++ + +S+ + + Sbjct: 301 LQLVEVSDAKLAANLQGKALPRPQMNLKLAGFARAELDQQKITLSKLVMSA----DDALL 356 Query: 302 DNKTKVSQDEENLLNFSENGAESMHD 327 + V + F G + D Sbjct: 357 RGEGAVRLGAVPKIEFDLKGDKLDLD 382 >gi|145600605|ref|YP_001164681.1| hypothetical protein YPDSF_3353 [Yersinia pestis Pestoides F] gi|162418977|ref|YP_001608360.1| hypothetical protein YpAngola_A4073 [Yersinia pestis Angola] gi|145212301|gb|ABP41708.1| hypothetical protein YPDSF_3353 [Yersinia pestis Pestoides F] gi|162351792|gb|ABX85740.1| AsmA family protein [Yersinia pestis Angola] Length = 729 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 50/410 (12%), Positives = 108/410 (26%), Gaps = 91/410 (22%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 +VL+G + LV DW + ++ + + + A++G + + Sbjct: 6 KVLVGASGFILLSLVAVVIFVSSFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGE 65 Query: 58 ------ILPFPSVFFKDIRIDQKE-----------------------DGSFESKIEGLSM 88 +P+P + +D+ + ++ + Sbjct: 66 GPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSAQGTPLSDAFPTGEMVTLKRIDA 125 Query: 89 RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVK 145 L LLS E+R+ +++ QP ++ + G +NW ST +V + I Sbjct: 126 SLAPLSLLSKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSASWSVDIGDIIFD 185 Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI--------------- 190 G I + D Q L+ ++ A ++ + + SV Sbjct: 186 RGEITLKDAIL-QADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSVNTTTPVNTTT 244 Query: 191 ----------------------AEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPL 226 + G + + A + + +Q Sbjct: 245 ATATTNPVTETVKSTTPDYLFGWKVDGQYQGQPLAGSGKIGGMISMNDANVPFPLQADMR 304 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFK 277 ++ + G L ++G L L LS K Sbjct: 305 YGSTLVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLSARLK 364 Query: 278 ISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + G V + + + D L + + Sbjct: 365 QAGGAVYHYENFNGKIGDSDIHGDLT---YTDSQPRPKLAGQVDSEKLRF 411 >gi|170022365|ref|YP_001718870.1| AsmA family protein [Yersinia pseudotuberculosis YPIII] gi|169748899|gb|ACA66417.1| AsmA family protein [Yersinia pseudotuberculosis YPIII] Length = 739 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 49/420 (11%), Positives = 108/420 (25%), Gaps = 101/420 (24%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 +VL+G+ + LV A DW + ++ + + + A++G + + Sbjct: 6 KVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGE 65 Query: 58 ------ILPFPSVFFKDIRIDQ-------------------------KEDGSFESKIEGL 86 +P+P + +D+ + ++ + Sbjct: 66 GPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEGEMVTLKRI 125 Query: 87 SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIH 143 L LL+ E+R+ +++ QP ++ + G +NW ST +V + I Sbjct: 126 DASIAPLSLLNKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSSSWSVDIGDII 185 Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI------------- 190 G I + D Q L+ ++ A ++ + + SV Sbjct: 186 FDRGEITLKDAIL-QADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSANTTTSSVT 244 Query: 191 --------------------------------AEGTGNFDNKRSAFKITANFPAK--NKA 216 + G + + + Sbjct: 245 TTSVVTTTATATTNPVTEIETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMISMNDAN 304 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR----- 271 + +Q + + G L ++G L L Sbjct: 305 VPFPLQADMRYGSTQVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQ 364 Query: 272 ----LSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 LS K + G V + + + D L + + Sbjct: 365 TEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLT---YTDSQPRPKLAGQVDSEKLRF 421 >gi|168465103|ref|ZP_02698995.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195632137|gb|EDX50621.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 686 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 37/341 (10%), Positives = 92/341 (26%), Gaps = 45/341 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +D+ + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I GRI I D+ S + ++ + ++ Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-IDPLGKPLPFSEVTGTKGK 206 Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236 + K S + G ++ + ++++ +Q + + G Sbjct: 207 ADKSSVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286 + K +GD L RL +V Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326 Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH 326 + + + + L + Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRL 363 >gi|238910362|ref|ZP_04654199.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 686 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +D+ + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I GRI I D+ S + ++ + ++ Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-IDPLGKPLPFSEVTGTKGK 206 Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236 + K + + G ++ + ++++ +Q + + G Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286 + K +GD L RL +V Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326 Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344 + + + + L + DL + K+ Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 + K Q K + + + F DK Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409 >gi|16766896|ref|NP_462511.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167990832|ref|ZP_02571931.1| AsmA family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|197264416|ref|ZP_03164490.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|16422172|gb|AAL22470.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197242671|gb|EDY25291.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205330808|gb|EDZ17572.1| AsmA family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261248763|emb|CBG26613.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995848|gb|ACY90733.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160149|emb|CBW19669.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914634|dbj|BAJ38608.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|323131970|gb|ADX19400.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332990461|gb|AEF09444.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 686 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +D+ + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I GRI I D+ S + ++ + ++ Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-IDPLGKPLPFSEVTGTKGK 206 Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236 + K + + G ++ + ++++ +Q + + G Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286 + K +GD L RL +V Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326 Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344 + + + + L + DL + K+ Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 + K Q K + + + F DK Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409 >gi|170701297|ref|ZP_02892262.1| AsmA family protein [Burkholderia ambifaria IOP40-10] gi|170133783|gb|EDT02146.1| AsmA family protein [Burkholderia ambifaria IOP40-10] Length = 765 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 22/177 (12%), Positives = 57/177 (32%), Gaps = 16/177 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 + + + + ++++ DW + + +G+ A+ G +++ Sbjct: 7 IGKSAAWIVGIVALIIAATGVFIFTFDWNHAKPWVNEHVSTALGRSFAINGDLRVDWRRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P + I + G ++ LPLL+ +I + + + Sbjct: 67 QGETGWRAWVPWPRFSATQLEIGNPDWAKGPKFVTLDAAHFDLAILPLLTHQIVIPSIDV 126 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFL 162 P ++ + G + W N+ L+ G I D + + Sbjct: 127 VNPAVDLERLADGRNTWTFEFKQSGQPSRWNLRLDSFGFAKGTIVYRDAITKADLTI 183 >gi|187923855|ref|YP_001895497.1| AsmA family protein [Burkholderia phytofirmans PsJN] gi|187715049|gb|ACD16273.1| AsmA family protein [Burkholderia phytofirmans PsJN] Length = 832 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 69/177 (38%), Gaps = 16/177 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 + +++ L + +++V L DW R + T +G+ A+ G +K+ Sbjct: 11 IGKIIAWLLAIIVILIVALTIFILTFDWNRARPYINDKVTQAIGRPFAINGDLKVGWRHP 70 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P +I + + + ++ + + + LPLL+ +I + + + Sbjct: 71 VGETGWRGWVPWPRFSAANITVGNPDWTKQPHFATLDEIDFQVKVLPLLAHDIVIPTINL 130 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFL 162 P ++ G +NW + ++ + L I G I + DQ+ + Sbjct: 131 VNPSVDLERVLDGRNNWTFKLASSSGPSEWKLDLHDIAFAKGNIALSDQQKKVDLQM 187 >gi|168260655|ref|ZP_02682628.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205350357|gb|EDZ36988.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 686 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +D+ + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I GRI I D+ S + ++ + ++ Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-IDPLGKPLPFSEVTGTKGK 206 Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236 + K + + G ++ + ++++ +Q + + G Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286 + K +GD L RL +V Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326 Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344 + + + + L + DL + K+ Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 + K Q K + + + F DK Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409 >gi|51598117|ref|YP_072308.1| hypothetical protein YPTB3827 [Yersinia pseudotuberculosis IP 32953] gi|51591399|emb|CAH23065.1| putative exported protein [Yersinia pseudotuberculosis IP 32953] Length = 737 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 49/418 (11%), Positives = 108/418 (25%), Gaps = 99/418 (23%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 +VL+G+ + LV A DW + ++ + + + A++G + + Sbjct: 6 KVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGE 65 Query: 58 ------ILPFPSVFFKDIRIDQKE-----------------------DGSFESKIEGLSM 88 +P+P + +D+ + ++ + Sbjct: 66 GPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEMVTLKRIDA 125 Query: 89 RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVK 145 L LL+ E+R+ +++ QP ++ + G +NW ST +V + I Sbjct: 126 SLAPLSLLNKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSSSWSVDIGDIIFD 185 Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI--------------- 190 G I + D Q L+ ++ A ++ + + SV Sbjct: 186 RGEITLKDAIL-QADLLAVIDPLAKALPFAQVTGVRRGASINSVTSRHSANTTTSSVTTT 244 Query: 191 ------------------------------AEGTGNFDNKRSAFKITANFPAK--NKAIS 218 + G + + + + Sbjct: 245 SVVTTTATATTNPVTEIETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMISMNDANVP 304 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR------- 271 +Q + + G L ++G L L Sbjct: 305 FPLQADMRYGSTQVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTE 364 Query: 272 --LSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 LS K + G V + + + D L + + Sbjct: 365 GHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLT---YTDSQPRPKLAGQVDSEKLRF 419 >gi|91786785|ref|YP_547737.1| AsmA [Polaromonas sp. JS666] gi|91696010|gb|ABE42839.1| AsmA [Polaromonas sp. JS666] Length = 664 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 37/319 (11%), Positives = 90/319 (28%), Gaps = 28/319 (8%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ES 81 LF W R R + +G++ + + +H+ +V + + E + Sbjct: 29 ILFFPWDVLRGPINRHVSDQLGRRFEITQHLAVHLGRTVTVKADGVEVANPEWATEPYLL 88 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEK 141 K + PLL G++ + + + P + G W + T D ++ Sbjct: 89 KASVAEFDIKLWPLLFGQVELPRIALIAPQFGLQIEPDGRRTWALSRDTSDESAVPVIGS 148 Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201 + V G +K + ++ S + + + G + N+ Sbjct: 149 LLVDQGSLKYLSAAQGANIAVT-------------FSLSPELAGPLPLSYKAAGKWKNEV 195 Query: 202 SAFKITAN---FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS 258 + I++ LA + G++ F + G Sbjct: 196 FSASGRTGGVLQLRAKTQAPFPIEISALAGKTSLKAQGSIANLADLAGVDATFDLRGRNL 255 Query: 259 KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313 + L + ++ G +S+ + + + + Q Sbjct: 256 EELYKLVGVVLPSTLPYKVRGKLAKHGKVWAVSQIQGVLGSTD----INGALRFDQSAAV 311 Query: 314 LLNFSENGAESMHDLNETD 332 + + N + D + Sbjct: 312 PV-LTGNLQSKLLDFGDLG 329 >gi|200388120|ref|ZP_03214732.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605218|gb|EDZ03763.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 686 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 36/341 (10%), Positives = 92/341 (26%), Gaps = 45/341 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +D+ + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I GRI I D+ S + ++ + ++ Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-IDPLGKPLPFSEVTGTKGK 206 Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236 + K + + G ++ + ++++ +Q + + G Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286 + K +GD L RL +V Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326 Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH 326 + + + + L + Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRL 363 >gi|16762692|ref|NP_458309.1| hypothetical protein STY4193 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144179|ref|NP_807521.1| hypothetical protein t3907 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213426513|ref|ZP_03359263.1| hypothetical protein SentesTyphi_13380 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213609630|ref|ZP_03369456.1| hypothetical protein SentesTyp_03475 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|289824319|ref|ZP_06543912.1| hypothetical protein Salmonellentericaenterica_03964 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25339937|pir||AC0986 probable membrane protein STY4193 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504998|emb|CAD08015.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139816|gb|AAO71381.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 686 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +D+ + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQESGWRSWVPWPHVHAEDVILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I GRI I D+ S + ++ + ++ Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206 Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236 + K + + G ++ + ++++ +Q + + G Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286 + K +GD L RL +V Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFNYR 326 Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344 + + + + L + DL + K+ Sbjct: 327 GFNGRIGDSD----IHGTFTYTTGKPSPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 + K Q K + + + F DK Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409 >gi|321226661|gb|EFX51711.1| hypothetical protein YhjG [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 688 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 36/341 (10%), Positives = 92/341 (26%), Gaps = 45/341 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +D+ + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I GRI I D+ S + ++ + ++ Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-IDPLGKPLPFSEVTGTKGK 206 Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236 + K + + G ++ + ++++ +Q + + G Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286 + K +GD L RL +V Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326 Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH 326 + + + + L + Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRL 363 >gi|194442684|ref|YP_002042858.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194401347|gb|ACF61569.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 686 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +D+ + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLTQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I GRI I D+ S + ++ + ++ Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206 Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236 + K + + G ++ + ++++ +Q + + G Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286 + K +GD L RL +V Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326 Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344 + + + + L + DL + K+ Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 + K Q K + + + F DK Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409 >gi|320539118|ref|ZP_08038789.1| putative assembly protein [Serratia symbiotica str. Tucson] gi|320030756|gb|EFW12764.1| putative assembly protein [Serratia symbiotica str. Tucson] Length = 610 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 46/385 (11%), Positives = 120/385 (31%), Gaps = 54/385 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+L L L V++ G + L ++ DFR ++ G ++ + G ++ HI P Sbjct: 1 MRRLLTALVILLVVLVAGMSALVLLVNPNDFRAYMVKKVEQNSGYQLMLAGDLRWHIWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ I + + E + + + LPLLS + V + + + S+ Sbjct: 61 LSILSGHITLTAPGAQAPLVSAENMRLDVKLLPLLSHHLFVKQVMLKNAVIRLTPDSEEQ 120 Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 ++D + ++ + + + I + +D+ + D+NL + Sbjct: 121 PPVDAPIAPVDPVAESVDTPWKLGIDNLRIVD-SLLIWQRANDEQINVRDINLTLQQNDQ 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 + A N ++ ++ + YP I+ Sbjct: 180 R-----------------------QVQMALSSRINRDQRDLTFTMAADIDLQHYPRQINA 216 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 + + +AG ++ + ++ + ++ + + + Sbjct: 217 K----------LTRFNYLLAGADILNGGIK---GEGHAQVAYQQTPPHIVFNPVSISA-- 261 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354 + + E L + + A D ++ ++ + + Sbjct: 262 --NDNQFTGDVSTTVAEVPALVMNWSSANLNLD--ALSGWQSRTSSSE-PQVTASAPVIA 316 Query: 355 VNKKEEKDNSHDKENQENFSGDKMI 379 D D +F+ ++ Sbjct: 317 SQID---DQQQDLAALRDFNAQLIM 338 >gi|91205653|ref|YP_538008.1| Outer membrane assembly protein [Rickettsia bellii RML369-C] gi|157826890|ref|YP_001495954.1| Outer membrane assembly protein [Rickettsia bellii OSU 85-389] gi|91069197|gb|ABE04919.1| Outer membrane assembly protein [Rickettsia bellii RML369-C] gi|157802194|gb|ABV78917.1| Outer membrane assembly protein [Rickettsia bellii OSU 85-389] Length = 841 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 50/373 (13%), Positives = 130/373 (34%), Gaps = 23/373 (6%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFESKIEGLS 87 +++ + + + + + G IK+ +LP P++ ++++ K + +E Sbjct: 29 NNYKGIIINKVKETINRDLTINGDIKLSLLPNPAISLPEVKLSSIDKTKEPYLVSVENAK 88 Query: 88 MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------------------QRKS 129 + LPL G I V + + +P +NF + + G NW + Sbjct: 89 ASLKLLPLFRGAIEVASVELQKPVINFEVLNNGQKNWEFSTPKNKAEINQDAPIPTASSN 148 Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189 ++ +++ + G+I + +++++ +L+ + + I L +++++ + Sbjct: 149 KNEIELPILINHFKISDGKIIYRENGNEKIFNNINLDTHVKSTKGPIDFTLVLEALEQKI 208 Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 +G K N + I K+ ++ + ++ GN Sbjct: 209 YIDGNIEEIGKVIPLSANINIADEKIKIEGKLDSENNSFIGLANIKGNTKTLGLPSDLQN 268 Query: 250 VFSVAGDFSKL-LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308 + + NL L + + +++ N I L++ + + + + Sbjct: 269 DYELTASIIADSKNLNLKDARLNYTNIELLANVNYDIEHSSLKANIIANPGNIIGDISSN 328 Query: 309 QDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEE--KDNSHD 366 D+ ++ N + A + +K + K I V + N + Sbjct: 329 LDKASIFNGNIKIAADNLQPLLNALKIKTDKLPPIINQKISLISNVVYNSQALILHNINL 388 Query: 367 KENQENFSGDKMI 379 N SGD + Sbjct: 389 IAGNSNLSGDVTL 401 >gi|91975912|ref|YP_568571.1| AsmA [Rhodopseudomonas palustris BisB5] gi|91682368|gb|ABE38670.1| AsmA [Rhodopseudomonas palustris BisB5] Length = 655 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 114/318 (35%), Gaps = 29/318 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R+ I + L +V ++ A T+ L ID R+ E Q G ++A+ G I++ I P Sbjct: 5 IKRLGISVAALIAVAVICALTLSLLIDRGAMRQAVESQLRAATGLELAIDGPIEVAIFPR 64 Query: 62 PSVFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V FK +R+ + G ++ L+ LPLL + D+ + QP + ++ Sbjct: 65 SYVTFKAVRLKSSEDGGGDTALSVDTLTATLRLLPLLLRRFEIADVVLFQPTIRVIRDAE 124 Query: 120 GVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 G SNW R + V +I ++ G + D + + + D++L Sbjct: 125 GGSNWTPFIKSLTRTMKPGLDEQVSFSEIRLQDGVLNYQDDANHTLENIGDIDL------ 178 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP-AKNKAISLKIQLFPLAYPIII 232 L+ SI + A G ++ +R I+ ++L P+ I Sbjct: 179 -----SLAWPSISRTFAAAGQFDWRGERIDGSISVGDFIQALAGDRSSLKLRLAGAPMKI 233 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVR 284 G + N + G + + + + + ++ Sbjct: 234 AFDGAIA-NRSSLVLEGTLTADSASLRNALRWAGQEPPGAGGFGRFAMKARANLVGPSIA 292 Query: 285 ISRYKLQSILPNSSTDED 302 ++ ++ + Sbjct: 293 LTNVNIELDKNVAEGVMT 310 >gi|186897336|ref|YP_001874448.1| AsmA family protein [Yersinia pseudotuberculosis PB1/+] gi|186700362|gb|ACC90991.1| AsmA family protein [Yersinia pseudotuberculosis PB1/+] Length = 741 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 49/422 (11%), Positives = 108/422 (25%), Gaps = 103/422 (24%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 +VL+G+ + LV A DW + ++ + + + A++G + + Sbjct: 6 KVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGE 65 Query: 58 ------ILPFPSVFFKDIRIDQ-------------------------KEDGSFESKIEGL 86 +P+P + +D+ + ++ + Sbjct: 66 GPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEGEMVTLKRI 125 Query: 87 SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIH 143 L LL+ E+R+ +++ QP ++ + G +NW ST +V + I Sbjct: 126 DASIAPLSLLNKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSSSWSVDIGDII 185 Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI------------- 190 G I + D Q L+ ++ A ++ + + SV Sbjct: 186 FDRGEITLKDAIL-QADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSANTTTSVVT 244 Query: 191 ----------------------------------AEGTGNFDNKRSAFKITANFPAK--N 214 + G + + + Sbjct: 245 TTATATTNPVTETETETETETETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMISMND 304 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR--- 271 + +Q + + G L ++G L L Sbjct: 305 ANVPFPLQADMRYGSTQVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPP 364 Query: 272 ------LSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 LS K + G V + + + D L + + Sbjct: 365 YQTEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLT---YTDSQPRPKLAGQVDSEKL 421 Query: 325 MH 326 Sbjct: 422 RF 423 >gi|168235210|ref|ZP_02660268.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194735296|ref|YP_002116547.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194710798|gb|ACF90019.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291481|gb|EDY30833.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 686 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 46/392 (11%), Positives = 102/392 (26%), Gaps = 50/392 (12%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +D+ + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVIVGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP---- 179 + + L+ I GRI I D+ S + L F + Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITILIDPLGKPLPFSEVTGTKGKE 207 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGN 237 + G ++ + ++++ +Q + + G Sbjct: 208 DKSSVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSGV 267 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISR 287 + K +GD L RL +V Sbjct: 268 VNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYRG 327 Query: 288 YKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDD 345 + + + + L + DL + K+ + Sbjct: 328 FNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDAE 379 Query: 346 LKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 K Q K + + + F DK Sbjct: 380 QSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409 >gi|168232443|ref|ZP_02657501.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194469033|ref|ZP_03075017.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194455397|gb|EDX44236.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333253|gb|EDZ20017.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 686 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +D+ + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I GRI I D+ S + ++ + ++ Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206 Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236 + K + + G ++ + ++++ +Q + + G Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286 + K +GD L RL +V Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326 Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344 + + + + L + DL + K+ Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 + K Q K + + + F DK Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409 >gi|161616667|ref|YP_001590632.1| hypothetical protein SPAB_04484 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168241770|ref|ZP_02666702.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194449561|ref|YP_002047639.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|198243449|ref|YP_002217570.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|207858848|ref|YP_002245499.1| hypothetical protein SEN3433 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|161366031|gb|ABX69799.1| hypothetical protein SPAB_04484 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194407865|gb|ACF68084.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197937965|gb|ACH75298.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205339018|gb|EDZ25782.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|206710651|emb|CAR35009.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326625352|gb|EGE31697.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 686 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +D+ + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLTQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I GRI I D+ S + ++ + ++ Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206 Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236 + K + + G ++ + ++++ +Q + + G Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286 + K +GD L RL +V Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326 Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344 + + + + L + DL + K+ Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 + K Q K + + + F DK Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409 >gi|330446435|ref|ZP_08310087.1| asmA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490626|dbj|GAA04584.1| asmA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 722 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 40/402 (9%), Positives = 116/402 (28%), Gaps = 65/402 (16%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L L + VV++G + ++ F+ Q G+ + + G I P Sbjct: 1 MKKLLYVLLGIIIVVVLGIVALVTLVNPNQFKPVIAEQVKEQTGRDLVISGDIGWRFFPT 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + + + + + LPLLS ++ + + +D H+ Sbjct: 61 LGLNVGETALKNPQGFAQPNLIQFKQAELSVAVLPLLSHKLDIGTVSLDGAHVFVQTLKD 120 Query: 120 GVSNWFQRKSTMDM-------------------------IHNVILEKIHVKGGRIKIIDQ 154 G SN V L + + + ++++ Sbjct: 121 GRSNLDDLTKQSTPTSPQESTAAPASKPAKETASKAAEKSWQVSLAGVKLLNASVDVVNE 180 Query: 155 ESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKR--------- 201 ++ L+ +N + + ++ + +G+ + Sbjct: 181 KTGSNIALNKVNFTLDTLAPNIWTKAQFDMAGVANGLQFTTQGSTELNLSASYKLCELKD 240 Query: 202 SAFKITAN----------------FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 +TA + ++L+ + + L + + Sbjct: 241 LQLSLTAKDAKTDIKHAQINVDHFKFGEWATLTLQAEGKLSDIAFVTKGQTQLTLSSAKN 300 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRL--SGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 I + + L + L + ++ ++ +S++ + Sbjct: 301 ILTLENLSLENSLSGKALPRPNMQVNLKTNASYDVATKTATLSKFSANA----DELAVSG 356 Query: 304 KTKVSQDEENLLNFSENGAESMHDL---NETDFFEEEEKKNK 342 + ++ F+ + + D ET E++K + Sbjct: 357 NASFVNHDVPVIRFNFSSDKIDLDRWMTAETSAPTEQKKVPE 398 >gi|197248741|ref|YP_002148538.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197212444|gb|ACH49841.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 686 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +D+ + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWSFNLAQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I GRI I D+ S + ++ + ++ Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206 Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236 + K + + G ++ + ++++ +Q + + G Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286 + K +GD L RL +V Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326 Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344 + + + + L + DL + K+ Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 + K Q K + + + F DK Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409 >gi|296157803|ref|ZP_06840637.1| AsmA family protein [Burkholderia sp. Ch1-1] gi|295892049|gb|EFG71833.1| AsmA family protein [Burkholderia sp. Ch1-1] Length = 839 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 69/177 (38%), Gaps = 16/177 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 + +++ L + +++V L DW R + T +G+ A+ G +K+ Sbjct: 11 IGKIVAWLVAIIVILIVALTIFILTFDWNRARPYINDKVTQAIGRPFAINGDLKVGWRHP 70 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P +I + + + ++ + + + LPLL+ +I + + + Sbjct: 71 VGETGWRGWVPWPRFSAANITVGNPDWTKQPQFATLDEIDFQVKVLPLLTHDIVIPAINL 130 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFL 162 P ++ G +NW + ++ + L I G I + DQ+ + Sbjct: 131 VNPSVDLERLLDGRNNWTFKLASSSGPSEWKLDLHDIAFAKGNIALSDQQKKVDLQM 187 >gi|167549165|ref|ZP_02342924.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168818568|ref|ZP_02830568.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205325713|gb|EDZ13552.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205344369|gb|EDZ31133.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320088029|emb|CBY97791.1| Uncharacterized protein yhjG [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 686 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +D+ + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I GRI I D+ S + ++ + ++ Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206 Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236 + K + + G ++ + ++++ +Q + + G Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286 + K +GD L RL +V Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326 Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344 + + + + L + DL + K+ Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 + K Q K + + + F DK Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409 >gi|165933055|ref|YP_001649844.1| outer membrane assembly protein [Rickettsia rickettsii str. Iowa] gi|165908142|gb|ABY72438.1| outer membrane assembly protein [Rickettsia rickettsii str. Iowa] Length = 839 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 57/383 (14%), Positives = 131/383 (34%), Gaps = 28/383 (7%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFES 81 P FI +++E + + + + G IK+ +LP P++ DI++ Sbjct: 32 PFFIPLNNYKEIVIDKVKEATNRDLTINGDIKLSLLPNPAISLSDIKLSSINGTKEPHLV 91 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-------- 133 +EG PL G I V + + +P +N + S G NW Sbjct: 92 SVEGAKASLRLFPLFRGAIEVASIELQKPIINLEVLSNGQKNWQFSTPNNASKTNELSSV 151 Query: 134 ---------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 +++ + G++ I++ S++++ +L +I + I L++ + Sbjct: 152 ESTDTKTELALPILISHFKIIDGKVIYIEKNSEKIFNDINLETKIKSLKGPIDLTLALKA 211 Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 ++ + +G K N + I K A+ ++ GN Sbjct: 212 LEQQINIDGNIEEIGKIIPLSANINLAGEKITIEGKFDSENNAFIGNTNIKGNTKTLGMP 271 Query: 245 PIYSGVFSVAGD-FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 + + + N+ + + +++ N I R L+S + + + Sbjct: 272 ADLQNDYELTTAITADSKNIAIKDARLNYPNIELLANANYDIERNNLKSNIIINPGNIIT 331 Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS-------VN 356 + + D+ N++ + + + D + + N+ L + I + +N Sbjct: 332 EISSNLDKTNIM-LQADSLKPILDALKLKTDKLPSIINQKLILTSNVISNAQAIKLQNIN 390 Query: 357 KKEEKDNSHDKENQENFSGDKMI 379 N +N + D I Sbjct: 391 LSAANTNLTGDIELKNLAQDITI 413 >gi|222055926|ref|YP_002538288.1| AsmA family protein [Geobacter sp. FRC-32] gi|221565215|gb|ACM21187.1| AsmA family protein [Geobacter sp. FRC-32] Length = 657 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 56/376 (14%), Positives = 127/376 (33%), Gaps = 38/376 (10%) Query: 2 LRRVL----IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 +++ L I + + LV A V L + R+ A + +++ + G + + Sbjct: 1 MKKTLKITGIIFAAIAVLFLVIAVLVKLLVTPEGVRKTVLPLAEKKLQRQVQL-GEVSVS 59 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 I + K + + +K + E + ++ F PLL+G + V + +D P + Sbjct: 60 IFS--GIVLKKLTVMEKTGADPFVQAEQVKLKYRFWPLLTGRVVVDQVVLDTPKIRVIRL 117 Query: 118 SKGVSN---------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ----VYFLSD 164 G N T N+++ ++ + G + D+ +Y ++ Sbjct: 118 PDGTFNYSDLMAKKEPAPAPQTTKEGINLLISRVALLKGAVHYEDRSKKTDQPFIYDITG 177 Query: 165 LNLQISARFLNIISPLSIDSI--KGSVIAEGTGNFDNKRSAFKITANFPAKNKAI----- 217 + + S ++ PL + ++ S+ +G K+ A + + Sbjct: 178 VEVNASDIAMDKQFPLRVKAMVPGASMEMDGKAADVGKKPAIDVVITIKEADIKKLAAGL 237 Query: 218 --SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 L ++ L +++ +L P + + S ++ LSG Sbjct: 238 PPQLTAKIRALDPSGAVNVRLHLAGPVSAP--KELLKAGEVKLNNVAFTTSGQRPSLSGL 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335 + + L D K VS L+ + + + DL F Sbjct: 296 LVLKGSQLSSQDLTLAMGA----NKLDIKFTVSNLLGKPLSVTSSVSAERFDLEP---FL 348 Query: 336 EEEKKNKNDDLKKDDI 351 ++ KK + +K + Sbjct: 349 KKSKKATAAEGEKPEP 364 >gi|157828346|ref|YP_001494588.1| outer membrane assembly protein [Rickettsia rickettsii str. 'Sheila Smith'] gi|157800827|gb|ABV76080.1| outer membrane assembly protein [Rickettsia rickettsii str. 'Sheila Smith'] Length = 830 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 56/383 (14%), Positives = 130/383 (33%), Gaps = 28/383 (7%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFES 81 P FI +++ + + + + G IK+ +LP P++ DI++ Sbjct: 23 PFFIPLNNYKGIVIDKVKEATNRDLTINGDIKLSLLPNPAISLSDIKLSSINGTKEPHLV 82 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-------- 133 +EG PL G I V + + +P +N + S G NW Sbjct: 83 SVEGAKASLRLFPLFRGAIEVASIELQKPIINLEVLSNGQKNWQFSTPNNASKTNELSSV 142 Query: 134 ---------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 +++ + G++ I++ S++++ +L +I + I L++ + Sbjct: 143 ESTDTKTELALPILISHFKIIDGKVIYIEKNSEKIFNDINLETKIKSLKGPIDLTLALKA 202 Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 ++ + +G K N + I K A+ ++ GN Sbjct: 203 LEQQINIDGNIEEIGKIIPLSANINLAGEKITIEGKFDSENNAFIGNTNIKGNTKTLGMP 262 Query: 245 PIYSGVFSVAGD-FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 + + + N+ + + +++ N I R L+S + + + Sbjct: 263 ADLQNDYELTTAITADSKNIAIKDARLNYPNIELLANANYDIERNNLKSNIIINPGNIIT 322 Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS-------VN 356 + + D+ N++ + + + D + + N+ L + I + +N Sbjct: 323 EISSNLDKTNIM-LQADSLKPILDALKLKTDKLPSIINQKLILTSNVISNAQAIKLQNIN 381 Query: 357 KKEEKDNSHDKENQENFSGDKMI 379 N +N + D I Sbjct: 382 LSAANTNLTGDIELKNLAQDITI 404 >gi|259419126|ref|ZP_05743043.1| AsmA [Silicibacter sp. TrichCH4B] gi|259345348|gb|EEW57202.1| AsmA [Silicibacter sp. TrichCH4B] Length = 680 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 49/393 (12%), Positives = 118/393 (30%), Gaps = 33/393 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R +L L + V VG + F+ E +Q G+++ G ++ P Sbjct: 33 MRLILRILSAIVITVAVGIAIL-TFLPGQKIAELAAQQIEKQTGRQVVFGGDVRFSFWPT 91 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + ++ + L++ + L+ G+IR+ ++ + PHLN Sbjct: 92 LGIQADNVAFANADWAGPEPLLTAGRLTIGVDAADLIRGDIRITELTVIIPHLNLETRED 151 Query: 120 GVSNWFQRKSTMDMIHN------------VILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 G+ NW + + D + +E + + G ++ V ++ ++L Sbjct: 152 GIGNWVFERGSSDAPADGAASETGGDEASFAIEAVTLNGASLRYA-PFGQDVIEMNQVDL 210 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGT-GNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 + N + + + ++ G + FK + +SL + Sbjct: 211 SLKWPDPNGTANVDL-----TLRPAGKPVRLQGEVGRFKSFLLGEVTSIGMSLTAEASKA 265 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK-KSRLSGNFKIS-DGNVR 284 + + DL G +A + + + K + + + DG + Sbjct: 266 RFDGLADLTGAFDGRITGASEDTRALMAALGMEPVEIPRGLGRKVLFAADTTYTPDGRIS 325 Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEEN-LLNFSENGAESMHDLNETD----FFEEEEK 339 + L ++ + + G + Sbjct: 326 LRDLSL----SLDENALRGGADLNLGASPMQVTAALKGEVLDFSALDAPGTTTSGAGGGS 381 Query: 340 KNKNDDLKKDDIQYSVNKKEEKDNSHDKENQEN 372 + + D I S+ + S D + + Sbjct: 382 EAPSQGWSTDPIDASMLGLVDGQISLDVQGLKT 414 >gi|222147632|ref|YP_002548589.1| AsmA family protein [Agrobacterium vitis S4] gi|221734620|gb|ACM35583.1| AsmA family protein [Agrobacterium vitis S4] Length = 651 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 49/374 (13%), Positives = 99/374 (26%), Gaps = 59/374 (15%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 + R + + V + P + + R E+ + G + + G + P Sbjct: 40 LARTAIAVIAVALCVFVASRLAAPYIVSSSLVRGSIEKAISRWSGHDVEIAGTPSLQFWP 99 Query: 61 FPSVFFKDIRIDQKEDGSF----------ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110 P + D+ I ++ + I+ LS + G D ++ +P Sbjct: 100 EPRITLPDVTITDRDPAQSGGTAGKAKRVLAHIDVLSASFGLVHAAMGNPVFDDFHLSRP 159 Query: 111 HLNFYLSSKGVSNWFQRKSTMDMIHNV----------------ILEKIHVKGGRIKIIDQ 154 H+ +++G +W + D I +V + I ++ GRI I DQ Sbjct: 160 HIYMRRNTQGHLDWAGQGLLSDAISHVQESIKGGQSLDKAYDARIGSITIENGRIDIEDQ 219 Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214 + + + S L + I + + P Sbjct: 220 PLQRRVVIDSI-----------FSHLFWPVMSAPAIGNANMIIGGVATQLDFASTQPLIL 268 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270 + F L P + F SG S+ L A Sbjct: 269 LGGGVGQAEFSLTAPTLKGSFSGKTGLAPARFASGQLSLTISNVPGLLAWTGATLPGTEA 328 Query: 271 ----RLSGNFKISDGNVRISRYKLQSILPNS------------STDEDNKTKVSQDEENL 314 ++ VR+ + ++ Q + Sbjct: 329 LHTVSVNATVTAETDKVRLDSLSFTANDTSATGLMEMAQAKSGKPKLSGTLAFEQMDIPT 388 Query: 315 L--NFSENGAESMH 326 FS + ++ H Sbjct: 389 FLGAFSLSAPDTSH 402 >gi|297520369|ref|ZP_06938755.1| predicted outer membrane biogenesis protein [Escherichia coli OP50] Length = 282 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 34/277 (12%), Positives = 82/277 (29%), Gaps = 28/277 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 P S+ +NW + + L+ I GRI I D+ S Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185 Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215 + L S + + G ++ + + + Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS 252 +Q + + G + K Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLK 282 >gi|114777137|ref|ZP_01452157.1| hypothetical protein SPV1_07234 [Mariprofundus ferrooxydans PV-1] gi|114552658|gb|EAU55118.1| hypothetical protein SPV1_07234 [Mariprofundus ferrooxydans PV-1] Length = 762 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 110/361 (30%), Gaps = 51/361 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + + +++V T P FID ++ E++ + G+K+ + G I + P+ Sbjct: 3 MPKTVRYSLVFVGLLIVLLLTAPFFIDVNTYKGQIEQKVEDVTGRKLTI-GKISASLFPW 61 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V ++ + ++ S ++ L ++ +PLLS + + I +P + Sbjct: 62 VGVELDNVHLANRKGFSTHDFISVKKLHVKLALIPLLSKNVEIKHFEIVEPSVYLERHDD 121 Query: 120 GVSNW----------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD 157 G SNW + + + E + + G + +D ++ Sbjct: 122 GQSNWGDLASSPATPAAASTTTSDVDTDSGAAGGMALAALQAESLSLTDGELTWVDGKA- 180 Query: 158 QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217 + L++LN+ ++ L V + +G D + Sbjct: 181 KPVALTELNVALNDVQLKR-----------PVAVKVSGKLDGNAFDLDANVGPVGDLTKL 229 Query: 218 -SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV------AGDFSKLLNLELSAKKS 270 + + + I L P G + A + L L Sbjct: 230 DPVSLPVQGKLKAEQIRLQPFADMITGWPAELGDIAKAVVGVSANIEQRPGGLRLGEGSV 289 Query: 271 RLSGNFKIS----DGNVRISRYKLQ--SILPNSSTDEDNKTKVS-QDEENLLNFSENGAE 323 L K+ KLQ ++ + S K +++ + Sbjct: 290 TLDAAHKLDVNWKAEMSGKDELKLQRVALAVDDSPLLAVKGRINRLSGTPSFELHIDSQP 349 Query: 324 S 324 Sbjct: 350 I 350 >gi|148266344|ref|YP_001233050.1| hypothetical protein Gura_4334 [Geobacter uraniireducens Rf4] gi|146399844|gb|ABQ28477.1| protein of unknown function DUF748 [Geobacter uraniireducens Rf4] Length = 1169 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 119/364 (32%), Gaps = 46/364 (12%) Query: 2 LRRV----LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++R L+ +G + +V AF +P + + ++ G+K+A+ G I Sbjct: 1 MKRWQKAALLTVGIVLLLVCFVAFALPGIV-----KSQAVKRVEAATGRKLAIGG---IS 52 Query: 58 ILPFP-SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 I PF +V +D R+ ++ G + + + + + + I P+L Sbjct: 53 INPFVWTVVVRDFRLSERRGGETFAAFSSVRIAISPSSIFREAPIISEARITSPYLRIVR 112 Query: 117 SSKGVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQES--DQVYFLSDLNLQ 168 + ++ +K + + L I V G I ID+ ++++ L + L Sbjct: 113 TGANTYSFSDLLGGKKKKGPEEGLPRFSLNNIAVTNGSIDFIDRGLPVEKLHALRKVELT 172 Query: 169 IS-----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 I + ++ G A + +A K+ A+ + Sbjct: 173 IPFVTTIPYLADRYITPRFSAVVNGAPLHVEGKLRPFPKAVEASATVDLKDIALPFYLAY 232 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 P PI ++ SG S + + +GN ++ V Sbjct: 233 VPGELPIRVE--------------SGRMSTK-LSVNYRAAQKENPELAFNGNVTLAGIKV 277 Query: 284 --RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341 R L ++ + ++ E ++ + S +G E ++ + Sbjct: 278 ADRTGAPFLSLARLDAGIT---RARLLTGEYDISSVSADGLEVFLSRDKKGVWSHSRLVG 334 Query: 342 KNDD 345 K Sbjct: 335 KASP 338 >gi|161505847|ref|YP_001572959.1| hypothetical protein SARI_04024 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867194|gb|ABX23817.1| hypothetical protein SARI_04024 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 686 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 38/340 (11%), Positives = 85/340 (25%), Gaps = 43/340 (12%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +DI + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDIILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + QP S +NW Sbjct: 88 PPDIPEVTMVHLPRVEATIAPLALLTKTVWLPWIKLVQPDARLIRLSGKTNNWTFNLAQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP---- 179 + + L+ I GRI D+ S + L F + Sbjct: 148 ENLDPNAKPSAWSFRLDNILFDQGRIAFDDKVSKADITILIDPLGKPLPFSEVTGTKGKE 207 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGN 237 + G ++ + ++++ +Q + + G Sbjct: 208 DKTSVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSGV 267 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISR 287 + K +GD L RL +V Sbjct: 268 VNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYRG 327 Query: 288 YKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH 326 + + + + L + Sbjct: 328 FNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRL 363 >gi|229586613|ref|YP_002845114.1| Outer membrane assembly protein [Rickettsia africae ESF-5] gi|228021663|gb|ACP53371.1| Outer membrane assembly protein [Rickettsia africae ESF-5] Length = 839 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 55/383 (14%), Positives = 130/383 (33%), Gaps = 28/383 (7%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFES 81 P FI +++ + + + + G IK+ +LP P++ +I++ Sbjct: 32 PFFIPLNNYKGIVIDKVKEATNRDLTINGDIKLSLLPHPAISLSEIKLSSINGTKEPHLV 91 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-------- 133 +EG PL G I V + + +P +N + S G NW Sbjct: 92 SVEGAKASLRLFPLFRGAIEVASIKLQKPIINLEVLSNGQKNWQFSTPNNASKTNELSSV 151 Query: 134 ---------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 +++ + G++ I++ S++++ +L +I + I L++ + Sbjct: 152 ESTNTKTELALPILISHFKIIDGKVIYIEKNSEKIFNDINLKTKIKSLKGPIDLTLALKA 211 Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 ++ + +G K N + I K ++ ++ GN Sbjct: 212 LEQQINIDGNIEEIGKIIPLSANINLAGEKIKIEGKFDSENNSFIGNANIKGNTKTLGMP 271 Query: 245 PIYSGVFSVAGD-FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 + + + N+ + + +++ N I R L+S + + + Sbjct: 272 ADLQNDYELTTAITADSKNIAIKDARLNYPNIALLANANYDIERNNLKSNIIINPGNIIT 331 Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS-------VN 356 + + D+ N++ + + + D + + N+ L + I S +N Sbjct: 332 EISSNLDKTNIM-LQADSLKPILDALKLKTNKLPPIINQKLILTSNVISNSQAIKLQNIN 390 Query: 357 KKEEKDNSHDKENQENFSGDKMI 379 N +N + D I Sbjct: 391 LSAANSNLTGDIELKNLAQDITI 413 >gi|213857573|ref|ZP_03384544.1| hypothetical protein SentesT_20731 [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 670 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 36/341 (10%), Positives = 92/341 (26%), Gaps = 45/341 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +D+ + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQESGWRSWVPWPHVHAEDVILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I GRI I D+ S + ++ + ++ Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206 Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236 + K + + G ++ + ++++ +Q + + G Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286 + K +GD L RL +V Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFNYR 326 Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH 326 + + + + L + Sbjct: 327 GFNGRIGDSD----IHGTFTYTTGKPSPKLEGDVESRQLRL 363 >gi|224585406|ref|YP_002639205.1| hypothetical protein SPC_3684 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224469934|gb|ACN47764.1| hypothetical protein SPC_3684 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 686 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 46/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +DI + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDIILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLTQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I GRI I D+ S + ++ + ++ Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206 Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236 + K + + G ++ + ++++ +Q + + G Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286 + K +GD L RL +V Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326 Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344 + + + + L + DL + K+ Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 + K Q K + + + F DK Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409 >gi|115351762|ref|YP_773601.1| AsmA family protein [Burkholderia ambifaria AMMD] gi|115281750|gb|ABI87267.1| AsmA family protein [Burkholderia ambifaria AMMD] Length = 765 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 65/209 (31%), Gaps = 16/209 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 + + + + ++V+V DW + + +G+ A+ G +++ Sbjct: 7 IGKSAAWIVGIVALVIVATGIFIFTFDWNHAKPWVNEHVSTALGRSFAIHGDLRVDWHRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P + I + G ++ LPL + +I + + Sbjct: 67 QGETGWRAWVPWPRFSATQLEIGNPDWAKGPKFVTLDAAHFDLAILPLFTHQIVIPSIDA 126 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P ++ + G + W N+ L+ G I D + ++ Sbjct: 127 VNPAVDLERLADGRNTWTFEFKQSGKPTRWNLRLDSFAFAKGTIVYRDAITKADLTIAVD 186 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194 L +++ S+ S G Sbjct: 187 TLGHPIPIGDVLKEQEQTSLAASAQHVGK 215 >gi|83952789|ref|ZP_00961519.1| AsmA family protein [Roseovarius nubinhibens ISM] gi|83835924|gb|EAP75223.1| AsmA family protein [Roseovarius nubinhibens ISM] Length = 652 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 40/348 (11%), Positives = 94/348 (27%), Gaps = 37/348 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R ++ L L V +V A L + Q G+K+ + G K+ P Sbjct: 1 MRWIIR-LMVLALVFVVIAVGSILLLPSERIARIAADQIAQATGRKVEMTGETKVSFYPV 59 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + + + + + L G IR+ + PH+ Sbjct: 60 LGISTGRTTVANADWSDKGPMFQADSFKVGVDPQALFGGAIRITGLEAVNPHILLQKDKS 119 Query: 120 GVSNWFQ-------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 G NW + L++ + G ++ ID ++ + D+N Sbjct: 120 GRVNWELNVEGVTTTGAGTESAPAQSSQLALTLDRALITGAQLTYIDDQAGSTTQIKDVN 179 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 + + + + TG + + Sbjct: 180 FDMRWPSYTGEATIDASFRPAQEVVSITGRIARLDHLIDGAVS----------DLTAKVS 229 Query: 227 AYPIIIDLFGNL-FWNEKQPIYSGVFSVAGDFSKLLN------LELSAKKSRLSGNFKIS 279 +D G + + S S + F L E + + ++G+ S Sbjct: 230 TKGGAVDFTGKVSSLPQAAGRISADLSDSSRFMTSLGQAALDLPEGLGRAASVAGDLTYS 289 Query: 280 D-GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + G + + + + ++ + + + Sbjct: 290 EAGRLSLRNLSAK---LDHNSLTGGVDFIPGGARPRIEAQLDAGALDL 334 >gi|238789832|ref|ZP_04633613.1| hypothetical protein yfred0001_9800 [Yersinia frederiksenii ATCC 33641] gi|238722028|gb|EEQ13687.1| hypothetical protein yfred0001_9800 [Yersinia frederiksenii ATCC 33641] Length = 581 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 35/351 (9%), Positives = 93/351 (26%), Gaps = 55/351 (15%) Query: 36 FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95 +Q G ++ ++G ++ H+ P S+ + + E + + + PL Sbjct: 1 MVKQVERKSGYQLQLEGDLRWHVWPQLSIIAGRTALTAPGATAPVVSAENMRLDVKLWPL 60 Query: 96 LSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-------KSTMDMIHNVILEKIHVKGGR 148 LS ++ + + + + S+ + + K+ V Sbjct: 61 LSHQLDIKQVMLKGAVIRLTPDSEIQQQPGAPVAPRGNAPVDEHRAWKLDINKVQVADSL 120 Query: 149 IKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208 + ++DQ + D+NL++ Sbjct: 121 LIWQRTDNDQ-VNVRDINLELQQDSQR-----------------------QVHITLSGRV 156 Query: 209 NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268 N ++ + S+ YP + N + + G + + Sbjct: 157 NRNQRDVSFSMAADADMGRYPQLFSANIN----------QFTYKLEGADIPVAGVS---G 203 Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328 + L +++ + +++ + + K + + + D Sbjct: 204 EGALQASYQSDIQQLLLNKLSFSA----NDNQLTGSAKATLGDVPDYVINLAADNLNLD- 258 Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSV---NKKEEKDNSHDKENQENFSGD 376 F E K N + + + D D +F+ Sbjct: 259 ---TIFGWEPKNTANSQDVVKQPGVTAPVIAVQADDDVGQDLRALRDFTAQ 306 >gi|15892395|ref|NP_360109.1| outer membrane assembly protein [Rickettsia conorii str. Malish 7] gi|15619545|gb|AAL03010.1| outer membrane assembly protein [Rickettsia conorii str. Malish 7] Length = 839 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 55/383 (14%), Positives = 130/383 (33%), Gaps = 28/383 (7%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFES 81 P FI +++ + + + + G IK+ +LP P++ +I++ Sbjct: 32 PFFIPLNNYKGIVIDKVKEATNRDLTINGDIKLSLLPNPAISLSEIKLSSINGTKEPHLV 91 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-------- 133 +EG PL G I V + + +P +N + S G NW Sbjct: 92 SVEGAKASLRLFPLFRGAIEVASIELQKPIINLEVLSNGQKNWQFSTPNNASKTNELSSV 151 Query: 134 ---------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 +++ + G++ I++ S++++ +L +I + I L++ + Sbjct: 152 ESTDTKTELALPILISHFKIIDGKVIYIEKNSEKIFNDINLETKIKSLKGPIDLTLALKA 211 Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 ++ + +G K N + I K ++ ++ GN Sbjct: 212 LEQQINIDGNIEEIGKIIPLSANINLAGEKIKIEGKFDSANNSFIGNANIKGNTKTLGMP 271 Query: 245 PIYSGVFSVAGD-FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 + + + N+ + + +++ N I R L+S + + + Sbjct: 272 ADLQNDYELTTAITADSKNIAIKDARLNYPNIELLANANYDIERNNLKSNIIINPGNIIT 331 Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS-------VN 356 + + D+ N++ + + + D + + N+ L + I S +N Sbjct: 332 EISSNLDKTNIM-LQADSLKPILDALKLKTDKLPPIINQKLILTSNVISNSQAIKLQNIN 390 Query: 357 KKEEKDNSHDKENQENFSGDKMI 379 N +N + D I Sbjct: 391 LSAANSNLTGDIELKNLAQDITI 413 >gi|172060733|ref|YP_001808385.1| AsmA family protein [Burkholderia ambifaria MC40-6] gi|171993250|gb|ACB64169.1| AsmA family protein [Burkholderia ambifaria MC40-6] Length = 765 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 64/209 (30%), Gaps = 16/209 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 + + + + ++++ DW + + +G+ A+ G +++ Sbjct: 7 IGKSAAWIVGIVALIIAATGVFIFTFDWNHAKPWVNEHVSTALGRSFAIHGDLRVDWHRP 66 Query: 57 -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 +P+P + I + G ++ LPL + +I + + Sbjct: 67 QGETGWRAWVPWPRFSATQLEIGNPDWAKGPKFVTLDATHFDLAILPLFTHQIVIPSIDA 126 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P ++ + G + W N+ L+ G I D + ++ Sbjct: 127 VNPAVDLERLADGRNTWTFEFKQSGKPTRWNLRLDSFAFAKGTIVYRDAITQADLTIAVD 186 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194 L +++ S+ S G Sbjct: 187 TLGHPIPIGDVLKEQEQTSLAASAQHVGK 215 >gi|257093895|ref|YP_003167536.1| AsmA family protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046419|gb|ACV35607.1| AsmA family protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 771 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 96/290 (33%), Gaps = 17/290 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR IG + + ++ V L D ++ D R G+ +A+ G +++ P Sbjct: 4 LRYAAIGFAAILGLAVLAIGVVALVFDANRYKADLVRIVQERTGRVLAIDGNLRLTFFPQ 63 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 V + + + + + + LPLL+G + + + + + G Sbjct: 64 IGVVIERLALSGPAGAGKFASVGEARLGLALLPLLTGTVVANHVELADLDVELVKRADGT 123 Query: 122 SNWFQ---------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 +N+ + + + ++ I ++ I D+ S + L+ + Sbjct: 124 TNFEDLAPSHGHPAPAALPGQPAKPVAPLALEIDAIRLRHATIVWRDEASGRSLRLTGFD 183 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-P 225 + + I + + + A + L++ P Sbjct: 184 ARSGRIAQGARGQVEIATRVEASEPTLKVDLKGSAGYRLDFARGAFAFDDVDLRLAGDAP 243 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLLNLELSAKKSRLSG 274 ++ L G++ + + + SVA L+L+ S K RL+ Sbjct: 244 ADVGLVAMLRGDVEVDPARDLVDIAKLSVALTTRDGLDLKASVPKLRLTS 293 >gi|73540520|ref|YP_295040.1| AsmA [Ralstonia eutropha JMP134] gi|72117933|gb|AAZ60196.1| AsmA [Ralstonia eutropha JMP134] Length = 791 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 56/436 (12%), Positives = 124/436 (28%), Gaps = 62/436 (14%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI---- 58 R+V++ +++ + L DW + + + +G+ A+ G + + Sbjct: 5 RKVILWTVLTPILLIALLVILILTFDWNRLKPWLNERVSDAIGRPFAINGDLTVTWRTAE 64 Query: 59 --------LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 +P+P + +DI I + + + L +PLL+ EI V + ID Sbjct: 65 GETGWHTLVPWPRLSARDITIGNPDWTKSPNIATVRELIFVLRPVPLLTHEIAVPTIVID 124 Query: 109 QPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-----QVYF 161 P + + +NW ++ + ++ + G + + D+ V Sbjct: 125 SPAVWLERLADNRNNWTFDTGPKMGKSRWHLDIGEVVLARGNLALSDEAQKIELQASVDT 184 Query: 162 LSDLNLQISARFLNIISPLSID-------------------------SIKGSVIAEGTGN 196 + D L AR +++P + + + + + G Sbjct: 185 IGDAALYEKARDGALVTPDASAPASESAPVAASAPSASGPPANAVAGNQRYGLRWKANGR 244 Query: 197 FDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254 ++ A +N + + + G L + Sbjct: 245 YNEASINASGKAGNVLSLRNVNVPFPLLADVRVGATRAVIEGTLTNPAHLAALDVYLHLQ 304 Query: 255 GDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 GD L RL K + + + S Sbjct: 305 GDSMAKLYALTGIVLPSTPPYETRGRLVATIKKGASVYAYRGFTGKVGGSDLSGTLTFTQ 364 Query: 306 KVSQDEENLLNFSENGAESMH-DLNET-DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDN 363 +V LL E DL + K + ++++ + + Sbjct: 365 RV---PRPLLAGELVSKELRFVDLAPLIGANAKPGKPAPDSNVRQPADKALPVAPFRTER 421 Query: 364 SHDKENQENFSGDKMI 379 + F+G +MI Sbjct: 422 WDRIDADVRFTGKRMI 437 >gi|218550796|ref|YP_002384587.1| outer membrane biogenesis protein [Escherichia fergusonii ATCC 35469] gi|218358337|emb|CAQ90984.1| putative outer membrane biogenesis protein [Escherichia fergusonii ATCC 35469] Length = 686 Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 48/381 (12%), Positives = 106/381 (27%), Gaps = 38/381 (9%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P + +DI + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVIWERQKQETGWRSWVPWPHIHAEDIILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + +++P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWVKLEKPDARLIRLSEKNNNWTFNLAND 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLNLQISARFLNIISP 179 + + L+ I GRI I D+ S + L S + + Sbjct: 148 DNKDANAKSSAWSFRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGNA 207 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGN 237 + G ++ + K + + +Q + + G Sbjct: 208 DKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGMLALRGEGTPFPVQADFRSGNTRVAFDGV 267 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNF--KISDGNVRISRYKL 290 + K +GD L G KI G + Y+ Sbjct: 268 VNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKIDTGKSSVFDYRG 327 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-DLNETDFFEEEEK--KNKNDDLK 347 + S + + L + DL + + K+K + K Sbjct: 328 FNGRIGDSDIHGSLVYTTGKPRPKLAGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQK 387 Query: 348 KDDIQYSVNKKEEKDNSHDKE 368 K + K + + + Sbjct: 388 KGEKSVQPAGKVLPYDRFETD 408 >gi|157149126|ref|YP_001456445.1| hypothetical protein CKO_04965 [Citrobacter koseri ATCC BAA-895] gi|157086331|gb|ABV16009.1| hypothetical protein CKO_04965 [Citrobacter koseri ATCC BAA-895] Length = 685 Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 43/384 (11%), Positives = 101/384 (26%), Gaps = 45/384 (11%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +DI + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDIILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKNNNWTFTLAAD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I GRI I D+ S + L F + S + Sbjct: 148 EKNDPNAQPSAWSFRLDTILFDQGRIAIDDKVSKADIEILVDPLGKPLPFSEVTGAKSNN 207 Query: 184 SIKGS---VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 + G ++ + +++ +Q + + G + Sbjct: 208 DNNVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSEGAPFPVQADFRSGNTRVAFAGVV 267 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRY 288 +GD L RL +V + Sbjct: 268 NDPLNMGGVDLQLKFSGDSLGELYDLTGVLLPDTPPFETDGRLVAKIDTETSSVFDYRNF 327 Query: 289 KLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFF--EEEEKKNKND 344 + + + L + DL + +++K Sbjct: 328 NGRIGDSD----IHGSLAYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGAQQSKRA 383 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKE 368 + K + K + + + Sbjct: 384 EQSKGEKSIQPADKVLPYDRFETD 407 >gi|67458945|ref|YP_246569.1| Outer membrane assembly protein [Rickettsia felis URRWXCal2] gi|67004478|gb|AAY61404.1| Outer membrane assembly protein [Rickettsia felis URRWXCal2] Length = 841 Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 53/379 (13%), Positives = 132/379 (34%), Gaps = 30/379 (7%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED--GSFESKIEGLS 87 +++ + K + + G IK+ +LP P+V +I++ + +E Sbjct: 38 NNYKGVIIDKVKEATNKDLTINGDIKLSLLPNPAVSLSEIKLSSIDGTKEPHLISVENAK 97 Query: 88 MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI--------- 138 + PL G I V + + +P +N + + G NW T + + Sbjct: 98 ASLKLFPLFRGAIEVASIELQKPIINLEVLNNGQKNWQFATPTSNNNPKINNVSSAESTN 157 Query: 139 ----------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188 + + G++ I++ S++++ +L+ +I + I L++ +++ Sbjct: 158 ANSELEFPILISHFKIIDGKVIYIEKNSEKIFNDINLDTKIKSLKGPIDFTLALKALEQQ 217 Query: 189 VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248 + +G K N ++ I K ++ ++ GN Sbjct: 218 INIDGNIEKIGKIIPLSANINLASEKIKIEGKFDSENNSFIGNANIKGNTKALGVPADLQ 277 Query: 249 GVFSVAGD-FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + + + N+ + + +++ N I R L+S + + + + Sbjct: 278 NDYELTTAITADNKNITIKDARLNYPNIELLANANYDIERNNLKSNIIVNPGNIITEISS 337 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS-------VNKKEE 360 + D+ N++ + + + D + + N+ +L + I S +N Sbjct: 338 NLDKTNIM-LQADSLKPILDALKLKTDKLPPIINQKLNLTSNVISNSQTIKLQNINLSAA 396 Query: 361 KDNSHDKENQENFSGDKMI 379 N +N + D I Sbjct: 397 NSNLTGDIEFKNLAQDITI 415 >gi|34580602|ref|ZP_00142082.1| outer membrane assembly protein [Rickettsia sibirica 246] gi|28261987|gb|EAA25491.1| outer membrane assembly protein [Rickettsia sibirica 246] Length = 830 Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 55/383 (14%), Positives = 129/383 (33%), Gaps = 28/383 (7%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFES 81 P FI +++ + + + + G IK+ +LP P++ +I++ Sbjct: 23 PFFIPLNNYKGIVIDKVKEATNRDLTINGDIKLSLLPNPAISLSEIKLSSINGTKEPHLV 82 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-------- 133 +EG PL G I V + + +P +N + S G NW Sbjct: 83 SVEGAKASLRLFPLFRGAIEVASIKLQKPIINLEVLSNGQKNWQFSTPNNTSKTNELSSV 142 Query: 134 ---------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 +++ + G + I++ S++++ +L +I + I L++ + Sbjct: 143 ESTDTKTELALPILISHFKIIDGTVIYIEKNSEKIFNDINLETKIKSLKGPIDLTLALKA 202 Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 ++ + +G K N + I K ++ ++ GN Sbjct: 203 LEQQINIDGNIAEIGKIIPLSANINLAGEKIKIEGKFDSENNSFIGNANIKGNTKTLGMP 262 Query: 245 PIYSGVFSVAGD-FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 + + + N+ + + +++ N I R L+S + + + Sbjct: 263 ADLQNDYELTTAITADSKNIAIKDARLNYPNIELLANANYDIERNNLKSNIIINPGNIIT 322 Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS-------VN 356 + + D+ N++ + + + D + + N+ L + I S +N Sbjct: 323 EISSNLDKTNIM-LQADSLKPILDALKLKTDKLPPIINQKLILTSNVISNSQAIKLQNIN 381 Query: 357 KKEEKDNSHDKENQENFSGDKMI 379 N +N + D I Sbjct: 382 LSAANSNLTGDIELKNLAQDITI 404 >gi|209520574|ref|ZP_03269330.1| putative transmembrane protein, AsmA-like protein [Burkholderia sp. H160] gi|209499011|gb|EDZ99110.1| putative transmembrane protein, AsmA-like protein [Burkholderia sp. H160] Length = 216 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 76/200 (38%), Gaps = 26/200 (13%) Query: 3 RRVLIGLGFLF---SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI--- 56 RR+ I +L +++V L DW R + + + +G+ A+ G +K+ Sbjct: 9 RRIGIIFAWLLATLVILIVALVIFILTFDWNRARPYIDGKVSQAIGRPFAINGDLKVGWR 68 Query: 57 ---------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDM 105 +P+P +I I + + ++ + + LPLL+ +I + + Sbjct: 69 HPVGETGWRSWVPWPRFSAVNITIGNPDWTRQPQFATLDEIGFEVKALPLLAHDIVIPAI 128 Query: 106 YIDQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLS 163 + P ++ + G +NW + + + L I G + + DQ+ Sbjct: 129 DLVNPSVDLERLADGRNNWTFKLPSSSGPSEWTLDLHDIGFAKGNLALSDQQKK------ 182 Query: 164 DLNLQISARFLNIISPLSID 183 ++LQ+ L PL Sbjct: 183 -IDLQMVVDTLGQPIPLGDA 201 >gi|70733863|ref|YP_257503.1| AsmA family protein [Pseudomonas fluorescens Pf-5] gi|68348162|gb|AAY95768.1| AsmA family superfamily [Pseudomonas fluorescens Pf-5] Length = 741 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 107/349 (30%), Gaps = 43/349 (12%) Query: 18 VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KED 76 F + D D++++ + A ++ + G I + P+ + D + Sbjct: 21 ALGFALTHLFDPNDYKDEIRQIARDKAHIELTLNGDIGWSLFPWLGLELHDAGVATLANP 80 Query: 77 GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW------------ 124 + ++ L + LPLL E+++ D+ ++ +L + G NW Sbjct: 81 SQPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLRLTRNKDGHGNWQDIGKAAPTDKQ 140 Query: 125 --------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + ++ + V R++ D+++D+ + + L Sbjct: 141 AETPAASTGEASQPPAGADKPAQPIRLDIDSLTVNNARVEYNDEQTDKQFTAESIQLSTG 200 Query: 171 ARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAFKI---TANFPAKNKAISL 219 +P+ + + S G FD ++ + A + Sbjct: 201 PIHEATNTPVKLTAFLASSQPAVRVRTELNGELRFDRALQRYQFEDMRLSGEAAGDPLQG 260 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 K F +++D N+ + G L + K ++SG I+ Sbjct: 261 KTLTFAAQGQLLLDQAANVAQWTGLKVSLNQLRALG----ELKVNDLDKTPQISGGISIA 316 Query: 280 DGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 ++ R Q++ VS+ + + + D Sbjct: 317 QFDLARFVDSIGQTLPAMGEGSLSKVELVSRLQGTPTSLALEDLNLKLD 365 >gi|148555348|ref|YP_001262930.1| AsmA family protein [Sphingomonas wittichii RW1] gi|148500538|gb|ABQ68792.1| AsmA family protein [Sphingomonas wittichii RW1] Length = 710 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 53/388 (13%), Positives = 115/388 (29%), Gaps = 32/388 (8%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTD----FREDFERQATLIVGKKIAVKGGIKIHI-LPF 61 + GF ++G + F+ + + FE A+ +++ V G + + + Sbjct: 34 LAAGFAVVATVIGLVVLAWFVLYVTKGRFLKPTFESVASRTTERQVKVAGDFQFYFDIID 93 Query: 62 PSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + I + + ++ R + +PL+ GE + + +D ++ ++ Sbjct: 94 ARFLADGLTISNPKWTTRPHFFEARHVAARIKTIPLIFGERKADWLVLDGARVDAEWDAR 153 Query: 120 GVSNWF--QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 ++W + + + V +++ ID LQ+ Sbjct: 154 KRNSWTFGDPNRKGEPFRWPTIARARVTDSQVRYIDPA-----------LQLRTDVKVGD 202 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI-SLKIQLFPLAYPIIIDLFG 236 I G V GTG K + P A + + + P +DL G Sbjct: 203 IAAGDARIAGKVPFTGTGTLRGKPFTMEGALLSPNSTVAFGRTRFAMHARSGPTRLDLDG 262 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYKLQ 291 L + V G +LL L + + G R +R + Sbjct: 263 VLPAATQIEGSDLNLKVRGPNIRLLFDFLGVAAPDTRAYWFTSKLTKAGGEWRFTRINGR 322 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNET-DFFEEEEKKNKNDDLKKDD 350 + + +S + L + D+ + F E + ++ Sbjct: 323 YGASD----LHGRMTISLPGDRLF-LDAVLDSNRVDIIDVGPFIGYEPEALAAKGVQAAV 377 Query: 351 IQYSVNKKEEKDNSHDKENQENFSGDKM 378 Q + D + NF + Sbjct: 378 AQTGSTPRILPDAPLRIDAIRNFDAHIL 405 >gi|167623798|ref|YP_001674092.1| AsmA family protein [Shewanella halifaxensis HAW-EB4] gi|167353820|gb|ABZ76433.1| AsmA family protein [Shewanella halifaxensis HAW-EB4] Length = 611 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 43/382 (11%), Positives = 104/382 (27%), Gaps = 60/382 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + + +VL V L D DF+ G+++A+ + P Sbjct: 5 MKFLKWFFISILGLVLALVLYVTLIFDPNDFKPQIIDLVKKETGRELAIGSDLSWTFFPS 64 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + I + + + + +PLL E+ + + +D L F Sbjct: 65 LGIKLGQITLSNPDGFQNPSMLAVNQVVAEVALMPLLKKEVEISQLNLDGLTLMFETQKN 124 Query: 120 GVSNW----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 G +++ + +T + + + I + +I ID + + Sbjct: 125 GRTSFDGLTGKAGKKDNTDKSAAKATTGTSLARLDIGGIAITNTKIINIDHANQTEQVFA 184 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 L + L +PL + T ++++ Sbjct: 185 LKELTLGRFQLGEFAPL--------------------KYELSATLPDMTLVSQGEGQLKV 224 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 I I+ ++ V G L+ S + + Sbjct: 225 AQDLNTITIN------------DFAVSNQVTGAGLPHGKLKADL---NTSLVIALDKQTL 269 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMHD--LNETDFFEEEEKK 340 + + ++ + V+ + + + D L + + + + K Sbjct: 270 NLVLSSFNA----ANINASGSLDVAYGHKVPSVVAKLEVGDVDLDALLPKDETKQAKGAK 325 Query: 341 NKNDDLKKDDIQYSVNKKEEKD 362 N K + + K D Sbjct: 326 APNTSSKAVEPDLTAMKSVNLD 347 >gi|153947448|ref|YP_001403002.1| AsmA family protein [Yersinia pseudotuberculosis IP 31758] gi|152958943|gb|ABS46404.1| AsmA family protein [Yersinia pseudotuberculosis IP 31758] Length = 745 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 49/426 (11%), Positives = 108/426 (25%), Gaps = 107/426 (25%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57 +VL+G+ + LV A DW + ++ + + + A++G + + Sbjct: 6 KVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGE 65 Query: 58 ------ILPFPSVFFKDIRIDQ-------------------------KEDGSFESKIEGL 86 +P+P + +D+ + ++ + Sbjct: 66 GPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEGEMVTLKRI 125 Query: 87 SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIH 143 L LL+ E+R+ +++ QP ++ + G +NW ST +V + I Sbjct: 126 DASIAPLSLLNKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSSSWSVDIGDII 185 Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI------------- 190 G I + D Q L+ ++ A ++ + + SV Sbjct: 186 FDRGEITLKDAIL-QADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSANTTTSSVT 244 Query: 191 --------------------------------------AEGTGNFDNKRSAFKITANFPA 212 + G + + Sbjct: 245 TTSVVTTTATATTNPVTETETETETETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMI 304 Query: 213 K--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270 + + +Q + + G L ++G L L Sbjct: 305 SMNDANVPFPLQADMRYGSTQVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLP 364 Query: 271 R---------LSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320 LS K + G V + + + D L + Sbjct: 365 ATPPYQTEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLT---YTDSQPRPKLAGQVD 421 Query: 321 GAESMH 326 + Sbjct: 422 SEKLRF 427 >gi|15600339|ref|NP_253833.1| hypothetical protein PA5146 [Pseudomonas aeruginosa PAO1] gi|9951446|gb|AAG08531.1|AE004927_9 hypothetical protein PA5146 [Pseudomonas aeruginosa PAO1] Length = 750 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 114/359 (31%), Gaps = 52/359 (14%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFE 80 + D D++++ + A ++ +KG I + P+ + D I Sbjct: 25 ALTHLFDPNDYKDEIRQIARDKANLELDLKGDIGWSLFPWLGLELHDTSIASAATPTKPF 84 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW---------------- 124 + ++ L + LPLL ++++ + ++ L+ +G NW Sbjct: 85 ADLQMLGLSVRVLPLLRKDVQMSAIRVEGLSLDLVRDKQGKGNWENIGKPAQPQAPAAPS 144 Query: 125 ------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 + + + ++ ++V R+ D+ S + Y + + Sbjct: 145 ETPPAADGKGAQAQAPEQAPQNDSPRTPIKLDIDSLNVNNARVTYTDEASGKQYNVEGIE 204 Query: 167 LQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNK 215 L A PL +++ G+ G FD + + A + Sbjct: 205 LSTGAIREGSSIPLKLNAYLGTNQPVVRVKTELTGNLRFDTALRRYQLEDARLSGEASGE 264 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 + K F +++D + + G L K ++ SG Sbjct: 265 PLQGKTATFSAQGQLLLDQSAQIAEWNGLKLSVNQLRALG----ELKARELDKDTKFSGG 320 Query: 276 FKISDGNVR-ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 I+ N+R ++ + + K +++ N S N + L++T F Sbjct: 321 LSIAPMNLREFLAGIGVTLPAMADANTLGKFELNTRLAGSRN-SLNLEDLKLGLDDTAF 378 >gi|218894246|ref|YP_002443115.1| Putative outer membrane biogenesis protein [Pseudomonas aeruginosa LESB58] gi|218774474|emb|CAW30291.1| Putative outer membrane biogenesis protein [Pseudomonas aeruginosa LESB58] Length = 750 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 114/359 (31%), Gaps = 52/359 (14%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFE 80 + D D++++ + A ++ +KG I + P+ + D I Sbjct: 25 ALTHLFDPNDYKDEIRQIARDKANLELDLKGDIGWSLFPWLGLELHDTSIASAATPTKPF 84 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW---------------- 124 + ++ L + LPLL ++++ + ++ L+ +G NW Sbjct: 85 ADLQMLGLSVRVLPLLRKDVQMSAIRVEGLSLDLVRDKQGKGNWENIGKPAQPQAPAAPS 144 Query: 125 ------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 + + + ++ ++V R+ D+ S + Y + + Sbjct: 145 ATPPAADGKGGQAQAPEQAPQNDSPRTPIKLDIDSLNVNNARVTYTDEASGKQYNVEGIE 204 Query: 167 LQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNK 215 L A PL +++ G+ G FD + + A + Sbjct: 205 LSTGAIREGSSIPLKLNAYLGTNQPVVRVKTELTGNLRFDTALRRYQLEDARLSGEASGE 264 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 + K F +++D + + G L K ++ SG Sbjct: 265 PLQGKTATFSAQGQLLLDQSAQIAEWNGLKLSVNQLRALG----ELKARELDKDTKFSGG 320 Query: 276 FKISDGNVR-ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 I+ N+R ++ + + K +++ N S N + L++T F Sbjct: 321 LSIAPMNLREFLAGIGVTLPAMADANTLGKFELNTRLAGSRN-SLNLEDLKLGLDDTAF 378 >gi|254243973|ref|ZP_04937295.1| hypothetical protein PA2G_04803 [Pseudomonas aeruginosa 2192] gi|126197351|gb|EAZ61414.1| hypothetical protein PA2G_04803 [Pseudomonas aeruginosa 2192] Length = 750 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 114/359 (31%), Gaps = 52/359 (14%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFE 80 + D D++++ + A ++ +KG I + P+ + D I Sbjct: 25 ALTHLFDPNDYKDEIRQIARDKANLELDLKGDIGWSLFPWLGLELHDTSIASAATPTKPF 84 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW---------------- 124 + ++ L + LPLL ++++ + ++ L+ +G NW Sbjct: 85 ADLQMLGLSVRVLPLLRKDVQMSAIRVEGLSLDLVRDKQGKGNWENIGKPAQPQAPAAPS 144 Query: 125 ------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 + + + ++ ++V R+ D+ S + Y + + Sbjct: 145 ATPPAADGKGAQAQAPEQAPQNDSPRTPIKLDIDSLNVNNARVTYTDEASGKQYNVEGIE 204 Query: 167 LQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNK 215 L A PL +++ G+ G FD + + A + Sbjct: 205 LSTGAIREGSSIPLKLNAYLGTNQPVVRVKTELTGNLRFDTALRRYQLEDARLSGEASGE 264 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 + K F +++D + + G L K ++ SG Sbjct: 265 PLQGKTATFSAQGQLLLDQSAQIAEWNGLKLSVNQLRALG----ELKARELDKDTKFSGG 320 Query: 276 FKISDGNVR-ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 I+ N+R ++ + + K +++ N S N + L++T F Sbjct: 321 LSIAPMNLREFLAGIGVTLPAMADANTLGKFELNTRLAGSRN-SLNLEDLKLGLDDTAF 378 >gi|322830847|ref|YP_004210874.1| AsmA family protein [Rahnella sp. Y9602] gi|321166048|gb|ADW71747.1| AsmA family protein [Rahnella sp. Y9602] Length = 684 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 46/373 (12%), Positives = 103/373 (27%), Gaps = 50/373 (13%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIR 70 DW + ++ + + + A++G + + +P+P + +DI Sbjct: 25 FIATFDWNRLKPTINQKVSTELNRAFAIRGDLGVDWSRQKDEAGWRAWVPWPHIHAEDIV 84 Query: 71 IDQKEDGSF------ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124 + D K+ + L LL E+ + +++ QP + G +NW Sbjct: 85 LGNPSDVQTGEKDAQMVKLARVDASIAPLALLHKEVLIPRIWLKQPDASLLRLDNGKNNW 144 Query: 125 FQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDL--NLQISAR 172 + + L I G+I D ++D + L L + Sbjct: 145 TFNLANSDTQDPAQPPSAWSFTLNDIVFDRGQIDYKDAKLKADFRAVIDPLGKPLPFTEV 204 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPI 230 + + + G ++ + + K+ + +Q + Sbjct: 205 VGDKKDAPKTKTPPYVFGWKVDGKYNGESLSGSGKIGGMLALKDPDVLFPLQADVRSGNT 264 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFKISDG 281 + + G L +G L + LS DG Sbjct: 265 RVAVAGTLQDPMNLGGLDLRLKFSGQTLSDLYGLTGVLLPQTPPYSTDGHLSATLHDKDG 324 Query: 282 NV-RISRYKLQSILPNSSTDEDNKTKVSQDEE-------NLLNFSENGAESMHDLNETDF 333 + R + + + + V + L F++ D N+ Sbjct: 325 AIYRYQNFNGEIGDSDIHGSLTYQA-VKPRPKLTGEVVSKQLRFADLAPLIGADSNQDKA 383 Query: 334 FEEEEKKNKNDDL 346 E + D + Sbjct: 384 KRGETTRQPADKV 396 >gi|107104245|ref|ZP_01368163.1| hypothetical protein PaerPA_01005318 [Pseudomonas aeruginosa PACS2] Length = 750 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 114/359 (31%), Gaps = 52/359 (14%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFE 80 + D D++++ + A ++ +KG I + P+ + D I Sbjct: 25 ALTHLFDPNDYKDEIRQIARDKANLELDLKGDIGWSLFPWLGLELHDTSIASAATPTKPF 84 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW---------------- 124 + ++ L + LPLL ++++ + ++ L+ +G NW Sbjct: 85 ADLQMLGLSVRVLPLLRKDVQMSAIRVEGLSLDLVRDKQGKGNWENIGKPAQPQAPAAPS 144 Query: 125 ------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 + + + ++ ++V R+ D+ S + Y + + Sbjct: 145 ATPPAADGKGAQAQAPEQAPQNDSPRTPIKLDIDSLNVNNARVTYTDEASGKQYNVEGIE 204 Query: 167 LQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNK 215 L A PL +++ G+ G FD + + A + Sbjct: 205 LSTGAIREGSSIPLKLNAYLGTNQPVVRVKTELTGNLRFDTALRRYQLEDARLSGEASGE 264 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 + K F +++D + + G L K ++ SG Sbjct: 265 PLQGKTATFSAQGQLLLDQSAQIAEWNGLKLSVNQLRALG----ELKARELDKDTKFSGG 320 Query: 276 FKISDGNVR-ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 I+ N+R ++ + + K +++ N S N + L++T F Sbjct: 321 LSIAPMNLREFLAGIGVTLPAMADANTLGKFELNTRLAGSRN-SLNLEDLKLGLDDTAF 378 >gi|254238151|ref|ZP_04931474.1| hypothetical protein PACG_04273 [Pseudomonas aeruginosa C3719] gi|126170082|gb|EAZ55593.1| hypothetical protein PACG_04273 [Pseudomonas aeruginosa C3719] Length = 750 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 114/359 (31%), Gaps = 52/359 (14%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFE 80 + D D++++ + A ++ +KG I + P+ + D I Sbjct: 25 ALTHLFDPNDYKDEIRQIARDKANLELDLKGDIGWSLFPWLGLELHDTSIASAATPTKPF 84 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW---------------- 124 + ++ L + LPLL ++++ + ++ L+ +G NW Sbjct: 85 ADLQMLGLSVRVLPLLRKDVQMSAIRVEGLSLDLVRDKQGKGNWENIGKPAQPQAPAAPS 144 Query: 125 ------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 + + + ++ ++V R+ D+ S + Y + + Sbjct: 145 ATPPAADGKGAQAQAPEQAPQNDSPRTPIKLDIDSLNVNNARVTYTDEASGKQYNVEGIE 204 Query: 167 LQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNK 215 L A PL +++ G+ G FD + + A + Sbjct: 205 LSTGAIREGSSIPLKLNAYLGTNQPVVRVKTELTGNLRFDTALRRYQLEDARLSGEASGE 264 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 + K F +++D + + G L K ++ SG Sbjct: 265 PLQGKTATFSAQGQLLLDQSAQIAEWNGLKLSVNQLRALG----ELKARELDKDTKFSGG 320 Query: 276 FKISDGNVR-ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 I+ N+R ++ + + K +++ N S N + L++T F Sbjct: 321 LSIAPMNLREFLAGIGVTLPAMADANTLGKFELNTRLAGSRN-SLNLEDLKLGLDDTAF 378 >gi|296532169|ref|ZP_06894928.1| asmA family protein [Roseomonas cervicalis ATCC 49957] gi|296267507|gb|EFH13373.1| asmA family protein [Roseomonas cervicalis ATCC 49957] Length = 636 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 111/345 (32%), Gaps = 27/345 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LRR+LI G ++ + L W F ERQA+ +G+ +A+ G + + + Sbjct: 3 LRRILIWTGLP----VLAVLLLVLLWSWAWFIPLLERQASARLGRPVAIGG-LDVDLGRI 57 Query: 62 PSVFFKDIRIDQKEDG---SFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNFYLS 117 + D+RI E + I L++R + + + I + D+ +++P + + Sbjct: 58 TGITLTDLRIANPEGFAEDPPFAAIPRLTLRLDAMEFIRHRRIIIPDIALERPVVTLLAT 117 Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSDLNLQISARFLNI 176 N+ T + G +++ D + + A Sbjct: 118 GDNRRNYDFPALTAADPDAPPSDTAEAPQLGALRVQAGVVDVRH------APLRADMQVR 171 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF--PAKNKAISLKIQLFPLAYPIIIDL 234 ++ + + + A G + ++ ++T ++ + L P L Sbjct: 172 VATEEPEGAEPRLRATAEGRYADQPITAELTGGAVLSLRDAENPWPVTLALANGPTRARL 231 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYK 289 G L + + +G L +SG + G VR + + Sbjct: 232 EGTLQDPLRFAGANLRLRFSGSDMARLTPLTGVPIPATPPYEVSGRLDYAAGAVRFTDIE 291 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334 + + + V+ + DL++ F Sbjct: 292 GKVGRSD----LGGELAVTPRDGQRPLVEATLRSRQVDLDDLAGF 332 >gi|304322134|ref|YP_003855777.1| putative AsmA protein [Parvularcula bermudensis HTCC2503] gi|303301036|gb|ADM10635.1| putative AsmA protein [Parvularcula bermudensis HTCC2503] Length = 749 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 63/375 (16%), Positives = 134/375 (35%), Gaps = 43/375 (11%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ +GL L V++ P FI + + E E A+ +G+++ ++G +I +LP Sbjct: 1 MKKLFLGLALLIVVLVAVLLIAPFFIPASVYEERIEAAASEQLGRQVTIEGAPRISLLPA 60 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + + ++++ + + LPLLS + + +D+P +N S Sbjct: 61 -EITVTGLTVANADGYEAAVFAEVDRAQIGVKLLPLLSRRVEITKFDLDRPTINLEASED 119 Query: 120 GVSN------------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 G + D + ++ L + + G I + Q + + +L Sbjct: 120 GGNWAFGRPAADTETEAAPPGEAPDALPDLRLGTVTINKGHISYRTPD-GQTWLAENADL 178 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP---AKNKAISLKIQL- 223 + L+++S++ + EGT + S T P A+ A L++ + Sbjct: 179 R-----------LTLESLEDPLTIEGTMVVQGEPSRLDATFTTPGRYAREGAADLRLSMT 227 Query: 224 -----FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278 + +L + + P +F++AG N K+ RL G Sbjct: 228 VGENHASTEMALSDELSFDGRLDIDFPALRSLFALAGVDLGTAN---GFKRLRLDGPVSG 284 Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE 338 S VR ++ + K + D + + A DL E E Sbjct: 285 SLDGVRFGE--GTALTFDD-ITGTGKLAIMIDGDRP-KATGTVALGTLDLTPYLPPEPEG 340 Query: 339 KKNKNDDLKKDDIQY 353 + D + Sbjct: 341 FAARRRAETGADADF 355 >gi|291612897|ref|YP_003523054.1| AsmA family protein [Sideroxydans lithotrophicus ES-1] gi|291583009|gb|ADE10667.1| AsmA family protein [Sideroxydans lithotrophicus ES-1] Length = 752 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 49/392 (12%), Positives = 122/392 (31%), Gaps = 25/392 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ L + + +V + D ++ + + + + G IK+H P Sbjct: 5 LKYGLWSIAVVVAVAAGMIVYIAATFDPNAYKPQIIQAVKDSKHRTLKLDGDIKLHFFPS 64 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + + + E ++ S+ + LPLL+ +I V ++ + G Sbjct: 65 IGASLGKVSLSEFESEQEFISVDSASVSLKLLPLLARQIVVDEVDVSGVKAQLVKYKNGK 124 Query: 122 SNWFQR--------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 +N + + + V + D+ + Y + DLNL Sbjct: 125 TNIDDLIGKEEATPAAPTPPAAASGAPMQFDIASVQVAKTDLSYSDEATGASYSVKDLNL 184 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLKIQLFPL 226 + + S + + S + F + N L +Q Sbjct: 185 KTGRIANDTPSKIDFSAHLQSSKPKLDIVAQIKTTLTFDLEKNLFQVQG---LDMQANGN 241 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 A I DL + + + +S+ + K + + + ++ Sbjct: 242 ALDIT-DLHVQAGGDASARVATKEYSMKKFTLSASGAKGK-SKDKFEAKLDVPELSLAKD 299 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346 ++ + N+ D + V+ E + + + + + + + + + + L Sbjct: 300 KFTGNGVTLNAKLDGAPGSIVAVLELPGIEGNASSFKVSAMVLDAELKQPD--QTFKLKL 357 Query: 347 KKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378 + + + ++ N D N +GDK+ Sbjct: 358 TSP---VTGSIEAQQFNLSDLTLAVNATGDKL 386 >gi|37525505|ref|NP_928849.1| putative assembly protein [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784933|emb|CAE13851.1| Protein AsmA precursor [Photorhabdus luminescens subsp. laumondii TTO1] Length = 610 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 45/392 (11%), Positives = 116/392 (29%), Gaps = 54/392 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R+L L L V++ G + + ++ DFR +Q G ++ ++ G++ H+ P Sbjct: 1 MKRLLTTLIILLVVIITGLAALVMLVNPNDFRAYMVKQVQKKSGYQLVLQDGMRWHVWPK 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + E + + PLLS ++ V ++ + L S+ Sbjct: 61 LSIITGRMSLTAPGAAQPTVMAENMRLDVALWPLLSHQLAVKEVMLKGAILRVTPESQSQ 120 Query: 122 SNWFQR---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + ++ + + I ++ + + D+NL + Sbjct: 121 KKGNTPIAPTGSTANPVAKGEGWELDIARVKIAD-SLLIWQRDDHEQLNVRDINLLMERD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 ++ + ++ A +L + YP + Sbjct: 180 NQ-----------------------NHISVELSSKVSKNQQDLAFNLNADVDITDYPYRV 216 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD-GNVRISRYKLQ 291 + + + G + S K + + + + Sbjct: 217 AGNIDF----------FDYQLQGAGIPTGGISGSGKVHAVYQKETTDELQTISLQALSFT 266 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEE--KKNKNDDLK 347 + + ++ K + + D + +E K+ + Sbjct: 267 A----NESELHGSIKAMLGAHADYRIDLSSQKLNLDNLMGWDLLPKEGSEVKRYYRIENS 322 Query: 348 KDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 +V+ E D S N +F+ + I Sbjct: 323 SAKPVIAVSSSAEPDYSAAFLN--DFNANVTI 352 >gi|330980636|gb|EGH78739.1| AsmA family protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 383 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 40/375 (10%), Positives = 108/375 (28%), Gaps = 49/375 (13%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + D + + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120 Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAAASTEAPGETTPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204 D + + + L P+ + + ++ G D + Sbjct: 181 DARKGRTFMAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGALRMDRVLKRY 240 Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261 + + + + K F +++DL N+ + + G L Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALG----EL 296 Query: 262 NLELSAKKSRLSGNFKISDGNVR--ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319 K ++SG I+ ++R + + S Sbjct: 297 RARDLDKTPQISGGLSIAQLDLRAFFENIGQPLPAMSEGALSKVEMVTRLAGTPT---SL 353 Query: 320 NGAESMHDLNETDFF 334 ++++ F Sbjct: 354 ALENLNLKVDDSTFT 368 >gi|254488708|ref|ZP_05101913.1| AsmA family protein [Roseobacter sp. GAI101] gi|214045577|gb|EEB86215.1| AsmA family protein [Roseobacter sp. GAI101] Length = 643 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 28/341 (8%), Positives = 97/341 (28%), Gaps = 26/341 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ ++ G + +++VG ++ + + Q + G+ +A+ G + + P Sbjct: 1 MKWIIRLFGLVLLIIVVGIGSL-FLLPADRIAKVAADQLRNLTGRNVAITGDVGLTFWPV 59 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + ++ + + L+ GEI++ ++ P + Sbjct: 60 LGINADGLEVGNASWAKDGAMLSAANAAIGVDAMALIRGEIKITNIEAQSPTIRLEQRRD 119 Query: 120 GVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 G ++W + + ++++++ + D E + ++L Sbjct: 120 GRASWQFTDAGGDAQIETAPTAPASTPRPLTIQRLNITDATLIY-DAEGSDLVRYEGVDL 178 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 + + ++ D F N + + + Sbjct: 179 SLDWSERAGPAVINAALRPAGERVSVEATID----RFDQFLNGDVRPLQARIDTKGGGAN 234 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-RLSGNFKIS-DGNVRI 285 L G + + +A + ++L ++ + ++ D + I Sbjct: 235 LTGRAGLAGAVAGDFWIKTSDTGRFLASLGAAGVDLPQGLGRTMDVRAQLTMTPDRRLAI 294 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 ++ + +N + Sbjct: 295 REMTADLG----GNTLRGAADITLNGTPDINAQLSAGALNL 331 >gi|238651046|ref|YP_002916903.1| outer membrane assembly protein [Rickettsia peacockii str. Rustic] gi|238625144|gb|ACR47850.1| outer membrane assembly protein [Rickettsia peacockii str. Rustic] Length = 830 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 55/383 (14%), Positives = 129/383 (33%), Gaps = 28/383 (7%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFES 81 P FI +++ + + + + G IK+ +LP P++ +I++ Sbjct: 23 PFFIPLNNYKGIVIDKVKEATNRDLTINGDIKLSLLPNPAISLSEIKLSSINGTKEPHLV 82 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-------- 133 +EG PL G I V + + +P +N + S G NW Sbjct: 83 SVEGAKASLRLFPLFRGAIEVASIELQKPIINLEVLSNGQKNWQFSTPNNASKTNELSSV 142 Query: 134 ---------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 +++ + G++ I++ S++++ +L +I + I L++ + Sbjct: 143 ESTDTKTELALPILISHFKIIDGKVIYIEKNSEKIFNDINLETKIKSLKGPIDLTLALKA 202 Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 ++ + +G K N I K ++ ++ GN Sbjct: 203 LEQQINIDGNIEEIGKIIPLSANINLAGAKIKIEGKFDSENNSFIGNTNIKGNTKTLGMP 262 Query: 245 PIYSGVFSVAGD-FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 + + + N+ + + +++ N I R L+S + + + Sbjct: 263 ADLQNDYELTTAITADSKNIAIKDARLNYPNIELLANANYDIERNNLKSNIIINPGNIIT 322 Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS-------VN 356 + + D+ N++ + + + D + + N+ L + I S +N Sbjct: 323 EISSNLDKTNIM-LQADSLKPILDALKLKTDKLPPIINQKLILTSNIISNSQAIKLQNIN 381 Query: 357 KKEEKDNSHDKENQENFSGDKMI 379 N +N + D I Sbjct: 382 LSAANSNLTGDIELKNLAQDITI 404 >gi|157964427|ref|YP_001499251.1| Outer membrane assembly protein [Rickettsia massiliae MTU5] gi|157844203|gb|ABV84704.1| Outer membrane assembly protein [Rickettsia massiliae MTU5] Length = 841 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 55/383 (14%), Positives = 128/383 (33%), Gaps = 28/383 (7%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFES 81 P FI +++ + + + + G IK+ +LP P++ +I++ Sbjct: 32 PFFIPLNNYKGIVIDKVKEATNRDLTINGDIKLSLLPNPAISLSEIKLSSINGTKEPHLV 91 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-------- 133 +EG PL G I V + + +P +N + S G NW Sbjct: 92 SVEGAKASLRLFPLFRGAIEVASIELQKPIINLEVLSNGQKNWQFSTPNNASKTNEISSV 151 Query: 134 ---------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 +++ + G++ I++ S++++ +L +I + I L++ + Sbjct: 152 ESTETKTELALPILISHFKIIDGKVIYIEKNSEKIFNDINLETKIKSLKGPIDLTLALKA 211 Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 ++ + +G K N + I K ++ ++ GN Sbjct: 212 LEQQINIDGNIEEIGKIIPLSTNINLAGEKIKIEGKFDSENNSFIGNANIKGNTKTLGMP 271 Query: 245 PIYSGVFSVAGD-FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 + + + N+ + + ++ N I R L+S + + + Sbjct: 272 ADLQNDYELTTAITANSKNIAIKDARLNYPNIELLAKANYDIERNNLKSNIIINPGNIIT 331 Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS-------VN 356 + + D+ N++ + + + D + + N+ L + I S +N Sbjct: 332 EISSNLDKTNIM-LQADSLKPILDALKLKTDKLPPIINQKLILTSNVISNSQAIKLQNIN 390 Query: 357 KKEEKDNSHDKENQENFSGDKMI 379 N N + D I Sbjct: 391 LSAANSNLTGDIELNNLAQDITI 413 >gi|51473541|ref|YP_067298.1| outer membrane assembly protein AsmA [Rickettsia typhi str. Wilmington] gi|51459853|gb|AAU03816.1| outer membrane assembly protein AsmA [Rickettsia typhi str. Wilmington] Length = 831 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 48/364 (13%), Positives = 127/364 (34%), Gaps = 38/364 (10%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFES 81 P FI +++ + + + + G IK+ +LP P++ DI++ Sbjct: 23 PFFIPLNNYKGVIIDKVKEATNRNLTINGDIKLSLLPTPAISLSDIKLSSINGTKVPHLV 82 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--------------- 126 +E + PL G I V + + +P ++ + G NW Sbjct: 83 SVEAVKASLRIFPLFRGAIEVALIELQKPIIHLEVLDNGQKNWQLYTSNNNNTINNNETV 142 Query: 127 --RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 + ++ +++ + G++ I++ ++Q++ +L I + I +++++ Sbjct: 143 QSNDTQTELELPILINHFKMIDGKVIYIEKNNEQIFNKINLETNIKSIKGPIDFNIALNA 202 Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 ++ + +G + N I K ++ +++ GN Sbjct: 203 LQQQIHIDGHVQEIGQIIPLSTNINLVGAKIKIDGKFDSKNNSFIGNVNVKGNTKTLGMP 262 Query: 245 PIYSGVFSVA------GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 + +++ + + L+ L +++ N I L+S + + Sbjct: 263 SDLNNDYTLTMSISAYNKNINIKDARLNYPNIEL-----LANANYGIENNNLESNIIVNP 317 Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358 + K + + D+ N+L D + F + K +K + + ++ N Sbjct: 318 GNIITKIQSNLDKTNIL--------LHADSLKPIFDALKLKTDKLSPIISKKLIFTANVI 369 Query: 359 EEKD 362 + Sbjct: 370 RKPQ 373 >gi|237728840|ref|ZP_04559321.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226909462|gb|EEH95380.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 686 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 38/339 (11%), Positives = 87/339 (25%), Gaps = 41/339 (12%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW + ++ + + + A++G + + +P+P V +DI + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWSSWVPWPHVHAEDIILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPDVTMVHLPRVEATLAPLALLTKTVWLPWVKLVKPDARLIRLSEKNNNWTFNLAGD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + L+ I GRI I D+ + + L F + + Sbjct: 148 ENRDPDAPPSAWSFRLDNILFDQGRIAINDKVTKSEIEILVDPLGKPLPFSEVTGAKGKE 207 Query: 184 SIK----GSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGN 237 S + G ++ + + + + IQ + + G Sbjct: 208 SNARVEDYVFGLKAQGRYNGEPLSGSGKIGGMLALRGEDTPFPIQADFRSGNTRVAFIGT 267 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISR 287 + +GD L RL +V Sbjct: 268 INDPMNMGGADLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDPEKSSVFDYRD 327 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + + + + +L + Sbjct: 328 FNGRIGDSDIHGTL---AYTTGKPRPMLKGDVESHQLRL 363 >gi|94969082|ref|YP_591130.1| hypothetical protein Acid345_2055 [Candidatus Koribacter versatilis Ellin345] gi|94551132|gb|ABF41056.1| hypothetical protein Acid345_2055 [Candidatus Koribacter versatilis Ellin345] Length = 587 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 60/372 (16%), Positives = 122/372 (32%), Gaps = 23/372 (6%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M +RVL G + V+LV +PLF++ FR E + +G+++ + G + + I Sbjct: 52 MNKRVLKIAGIVVGVILVILIAIPLFVNVETFRPKIEASLSEALGREVKL-GKMSLSIFS 110 Query: 61 FPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLS 117 S+ +I I S + L + E + S +I+V +++P + + Sbjct: 111 G-SLSVDNISIADDPAFSKAPFVSAKSLKIGVELGALIFSKQIKVTGFKLEKPEIMLLSA 169 Query: 118 SKGVSNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNL 167 G N+ +++ +V + + + G++ + S + L++ Sbjct: 170 PNGTWNFSTLGAKNAPKTSQASSGAPSDVTIAHLSIDDGKLTVAKANSSAKAQVFDKLDV 229 Query: 168 QISARFLNIISPLSIDS-IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP- 225 +++ + P + + G A+ TG F AK K L + Sbjct: 230 KVNDFSMASQFPFEVSVDLPGGGDAKITGKAGPVNQQDAAKTPFDAKLKVNKLDVAASGF 289 Query: 226 ----LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281 I+ L G L N Q +G ++A + K L Sbjct: 290 VDASTGIGGIVGLEGTLSSNGTQAKGAGEVTMAKAKLSPKGTP-APKDITLKYALTADLE 348 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341 + + + +S + + LN + N D E Sbjct: 349 KQSGNVSQGDIGIGKASARLTG-VYSTHGDVQSLNMNLNAPNMPVDELEAFLPAMGVTLP 407 Query: 342 KNDDLKKDDIQY 353 L+ + Sbjct: 408 SGSKLEGGTLSA 419 >gi|304393141|ref|ZP_07375069.1| AsmA family protein [Ahrensia sp. R2A130] gi|303294148|gb|EFL88520.1| AsmA family protein [Ahrensia sp. R2A130] Length = 627 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 50/379 (13%), Positives = 113/379 (29%), Gaps = 21/379 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + L ++V P + + Q + ++G + + G ++ + P+ Sbjct: 29 MNKWLKIAIGFCLFIVVAVVAAPKLLSTPTVKARVAAQLSDVLGLPVQLNGSSQVSLRPY 88 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 V + D+ I Q D ++ L + L G+ R+ ++ + +P L +G Sbjct: 89 LGVSWSDVVIGQNSDAMPLLTMDRLDAKLTLSAALFGDARLSELTLVRPVLRLVRDGQGT 148 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 NW + V GR+ I+D + Q D + S + + + Sbjct: 149 GNWQAADGQLGQ-WFAGKNTGSVALGRLMIVDGIALQ----DDATTRTSRKLTGLQGEVV 203 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL-KIQLFPLAYPIIIDLFGNLFW 240 + A ++ + + P + + A P + G + Sbjct: 204 WSRTSSAASANFGAIWNGEPFRITAQIDDPNAMRDGKASDVAFTLSANPAQLSFNGEMVR 263 Query: 241 N--EKQPIYSGVFSVAGDFSKLLNLELSAKKSRL--------SGNFKISDGNVRIS---- 286 E +SG ++ ++ L SG I+ ++ Sbjct: 264 PGAENDTRFSGNLAMETTSIIRFREWFGLPRTALDIIGPARVSGQLDINGTRADLADASV 323 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEE-EEKKNKNDD 345 Q+ + + + N + D D F K+ + D Sbjct: 324 DIDGQTGNGQLNFQWNREGAALLSGTLGFNQVAFPNPMIVDKPWADLFGHPHGAKHIDLD 383 Query: 346 LKKDDIQYSVNKKEEKDNS 364 L+ ++ D + Sbjct: 384 LRISAASATIGNAPVSDIA 402 >gi|256821712|ref|YP_003145675.1| AsmA family protein [Kangiella koreensis DSM 16069] gi|256795251|gb|ACV25907.1| AsmA family protein [Kangiella koreensis DSM 16069] Length = 615 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 57/424 (13%), Positives = 133/424 (31%), Gaps = 53/424 (12%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +L+ + + ++ +V A + +F + + +Q G ++ +K + + P Sbjct: 4 LLKWSFRLVIAVVALFIVAAVALMIFFNSDQLKTTLTKQVNERTGAELVIKQDLSLSFFP 63 Query: 61 FPSVFFKDIRIDQKEDGS---FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 + ++ DI + Q I +S + +PL SG+I V + + LN Sbjct: 64 WLAIETGDISLSQPPAFPQTDPALTIGAVSASIKLMPLFSGDIEVGAVTVSDATLNMTSG 123 Query: 118 SKGVSNWF--------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 +G SN ++++ ++ L+K+ + + D + Q ++ Sbjct: 124 PQGKSNLQAFTEALQKAETADTAKEASDAKALDLSLQKLELNNFTVNQFDTTNKQSQSIT 183 Query: 164 DLNLQISARFLNIISPLSIDSI--------KGSVIAEGTGNFDNKRSAFKITANFPAKNK 215 I P++ EG + + + + Sbjct: 184 LDQFIIQDFRPGEFRPVNASGKISTEVNKPAIEWALEGDLKVSSDFKQINVQKLDASVDN 243 Query: 216 --------AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY------------SGVFSVAG 255 ++ + + +I+ G + +++ + + Sbjct: 244 VSSTVQTVGLTGTLSVAMGGKSTLIEHQGAVTLDDQSVTFKASAGLGDMNDIKVSMNADS 303 Query: 256 DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315 LL K++ G S + + ++Q L S + N + +Q N+ Sbjct: 304 LTLDLLMATSGKKETTAKGEADFSPVADFLKKSRIQGDLTVGSLNLKNT-RFTQVSANIF 362 Query: 316 NFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV----NKKEEKDNSHDKENQE 371 N GA D + F+ E + D + ++ N + D E Sbjct: 363 N---KGATLHLDPFKAQAFQGELATTASVDFASKPLALAIQPDLNNIQIGDLLAAFFGFE 419 Query: 372 NFSG 375 SG Sbjct: 420 RLSG 423 >gi|258542433|ref|YP_003187866.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter pasteurianus IFO 3283-01] gi|256633511|dbj|BAH99486.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter pasteurianus IFO 3283-01] gi|256636570|dbj|BAI02539.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter pasteurianus IFO 3283-03] gi|256639623|dbj|BAI05585.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter pasteurianus IFO 3283-07] gi|256642679|dbj|BAI08634.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter pasteurianus IFO 3283-22] gi|256645734|dbj|BAI11682.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter pasteurianus IFO 3283-26] gi|256648787|dbj|BAI14728.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter pasteurianus IFO 3283-32] gi|256651840|dbj|BAI17774.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654831|dbj|BAI20758.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter pasteurianus IFO 3283-12] Length = 715 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 45/367 (12%), Positives = 114/367 (31%), Gaps = 32/367 (8%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64 VL+G G V++ F W F +AT I+ +K ++ + + + ++ Sbjct: 15 VLVGFGSFLLAVILLIV----FWSWDWFVPLVNSRATAILHRKTTIE-HLHVALGRVTTI 69 Query: 65 FFKDIRIDQKEDGSF----ESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYLSSK 119 +++RI+Q + + ++ + L++ + L + + + + P + + Sbjct: 70 RVENLRIEQPQTFAQEKSLFAESKELAVSVDVWSYLWHRALHIPLIALTDPKADIFARKN 129 Query: 120 GVSNW---FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 G +N+ K G ++I D Y ++Q+ + Sbjct: 130 GENNYTFTADGKPAPTDKKKTDQASNLPDIGELRITDGALHVRYDPLQADMQM-----GV 184 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN--KAISLKIQLFPLAYPIIIDL 234 + + +G++ G + + + + LF P L Sbjct: 185 ETTPPEGNNRGTLRLTAKGRYAQQPITARFVGGTVLSFVADKEPYPVDLFVQNGPTTATL 244 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYK 289 G++ AG LL R ++G + +V ++ Sbjct: 245 KGDVVHPLTLGGARLKLHFAGPDMSLLYPLTGVPIPRTPAYSITGALDYTREHVVFKDFE 304 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLL-NFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 + + +V+ E+ + + + + F + + K Sbjct: 305 GKMGTSD----IGGTIEVNPHEKPIFVQADLHSKQVNLV--DLGGFIGAKPDKTKAEEKA 358 Query: 349 DDIQYSV 355 + +V Sbjct: 359 EAKSNTV 365 >gi|116054460|ref|YP_793618.1| hypothetical protein PA14_67975 [Pseudomonas aeruginosa UCBPP-PA14] gi|115589681|gb|ABJ15696.1| Putative outer membrane biogenesis protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 750 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 114/359 (31%), Gaps = 52/359 (14%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFE 80 + D D++++ + A ++ +KG I + P+ + D I Sbjct: 25 ALTHLFDPNDYKDEIRQIARDKANLELDLKGDIGWSLFPWLGLELHDTSIASTATPTKPF 84 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW---------------- 124 + ++ L + LPLL ++++ + ++ L+ +G NW Sbjct: 85 ADLQMLGLSVRVLPLLRKDVQMSAIRVEGLSLDLVRDKQGKGNWENIGKPAQPQAPSAPS 144 Query: 125 ------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 + + + ++ ++V R+ D+ S + Y + + Sbjct: 145 ATPPAADGKGAQAQAPEQAPQNDSPRTPIKLDIDSLNVNNARVTYTDEASGKQYNVEGIE 204 Query: 167 LQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNK 215 L A PL +++ G+ G FD + + A + Sbjct: 205 LSTGAIREGSSIPLKLNAYLGTNQPVVRVKTELTGNLRFDTALRRYQLEDARLSGEASGE 264 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 + K F +++D + + G L K ++ SG Sbjct: 265 PLQGKTATFSAQGQLLLDQSAQIAEWNGLKLSVNQLRALG----ELKARELDKDAKFSGG 320 Query: 276 FKISDGNVR-ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 I+ N+R ++ + + K +++ N S N + L++T F Sbjct: 321 LSIAPMNLREFLAGIGVTLPAMADANTLGKFELNTRLAGSRN-SLNLEDLKLGLDDTAF 378 >gi|296391998|ref|ZP_06881473.1| AsmA family protein [Pseudomonas aeruginosa PAb1] gi|313110188|ref|ZP_07796086.1| Putative outer membrane biogenesis protein [Pseudomonas aeruginosa 39016] gi|310882588|gb|EFQ41182.1| Putative outer membrane biogenesis protein [Pseudomonas aeruginosa 39016] Length = 750 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 114/359 (31%), Gaps = 52/359 (14%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFE 80 + D D++++ + A ++ +KG I + P+ + D I Sbjct: 25 ALTHLFDPNDYKDEIRQIARDKANLELDLKGDIGWSLFPWLGLELHDTSIASTATPTKPF 84 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW---------------- 124 + ++ L + LPLL ++++ + ++ L+ +G NW Sbjct: 85 ADLQMLGLSVRVLPLLRKDVQMSAIRVEGLSLDLVRDKQGKGNWENIGKPAQPQAPSAPS 144 Query: 125 ------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 + + + ++ ++V R+ D+ S + Y + + Sbjct: 145 ATPPAADGKGAQAQAPEQAPQNDSPRTPIKLDIDSLNVNNARVTYTDEASGKQYNVEGIE 204 Query: 167 LQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNK 215 L A PL +++ G+ G FD + + A + Sbjct: 205 LSTGAIREGSSIPLKLNAYLGTNQPVVRVKTELTGNLRFDTALRRYQLEDARLSGEASGE 264 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 + K F +++D + + G L K ++ SG Sbjct: 265 PLQGKTATFSAQGQLLLDQSAQIAEWNGLKLSVNQLRALG----ELKARELDKDAKFSGG 320 Query: 276 FKISDGNVR-ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 I+ N+R ++ + + K +++ N S N + L++T F Sbjct: 321 LSIAPMNLREFLAGIGVTLPAMADANTLGKFELNTRLAGSRN-SLNLEDLKLGLDDTAF 378 >gi|99080492|ref|YP_612646.1| AsmA [Ruegeria sp. TM1040] gi|99036772|gb|ABF63384.1| AsmA [Ruegeria sp. TM1040] Length = 646 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 56/392 (14%), Positives = 116/392 (29%), Gaps = 33/392 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R +L L + + VG + F+ E +Q G+++ G ++ P Sbjct: 1 MRLILRILSAIVITIAVGVAIL-TFLPGQKIAELAAQQIEKQTGRQVVFGGDVRFSFWPT 59 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + D+ + + L++ + L+ G+IR+ ++ PHLN Sbjct: 60 LGIQADDVALANADWAGPEPLLTAGRLTIGVDAADLIRGDIRITELTAIVPHLNLETRED 119 Query: 120 GVSNWFQRKSTMDMIH------------NVILEKIHVKGGRIKIIDQESDQVYFLS-DLN 166 G+ NW + +V +E I ++G ++ D V DL Sbjct: 120 GIGNWVFDAPAVGETPAQVETDAEGEGTSVAIEAITLRGASLRYAAHGQDVVETNQVDLQ 179 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 L L++ + G +F+ + +++ + L Sbjct: 180 LAWPDPNGTANVDLTLRPAGKPLRIAGEV------GSFRRFLLGEVASLGVTVTAEASKL 233 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-RLSGNFKIS-DGNVR 284 + DL G + ++L ++ + + + DG V Sbjct: 234 RFDGQADLSGAFDGRITGASDDTSALLVALGQAAVDLPKGLGRAMTFAADTTYTPDGRVS 293 Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN----ETDFFEEEEKK 340 + L ++ L + M DL+ T + Sbjct: 294 LRDLSL----ALDHNALRGDADLNLAASP-LKVTAALEGDMLDLSALGAPTTGAGGNTAE 348 Query: 341 NKNDDLKKDDIQYSVNKKEEKDNSHDKENQEN 372 I S+ E D S D + + Sbjct: 349 PATQGWSTTPIDASMLALIEGDISLDVKGLQT 380 >gi|294141162|ref|YP_003557140.1| AsmA family protein [Shewanella violacea DSS12] gi|293327631|dbj|BAJ02362.1| AsmA family protein [Shewanella violacea DSS12] Length = 614 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 93/307 (30%), Gaps = 20/307 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ V L + A + L D DF+ + G+ + + + P Sbjct: 5 MKIVKWFFIVLLLMFASLAAYLTLVFDPNDFKPEIVDAVKKQTGRDLIIAKDLSWTFFPS 64 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + DI + + +++ + E LPL ++ + + +D +N Sbjct: 65 IGIELGDISLSNPKGFDNASMLEVKKIVAEVELLPLFRKQVEIAQLNLDGLVINLETRKD 124 Query: 120 GVSNWFQRKSTMDMIHNVILEK---------------IHVKGGRIKIIDQESDQVYFLSD 164 G S++ +S +V L+K + V +I+I D+++ S Sbjct: 125 GRSSFDGFQSQSTAEQSVQLDKPAVSSASLSSLDIGGVSVTNTQIRISDKQAGTEQVFSL 184 Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 NL + L + L + + AN K+ I+ I Sbjct: 185 DNLTLGKFSLGEFATLEYRFSAEMPDIKLMSLGQGSIKLSQNMANIQVKDFKITNAIAGE 244 Query: 225 PLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF--KISDG 281 + + I L + + + +L + + G Sbjct: 245 TIPNKKLDITLLTQVEILLETKQVHLLLDKLNAGDIEAKGKLDIAYGHKVPHIIANLDFG 304 Query: 282 NVRISRY 288 ++ + + Sbjct: 305 DIDLDKL 311 >gi|114047736|ref|YP_738286.1| AsmA family protein [Shewanella sp. MR-7] gi|113889178|gb|ABI43229.1| AsmA family protein [Shewanella sp. MR-7] Length = 606 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 46/398 (11%), Positives = 112/398 (28%), Gaps = 58/398 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + + L ++V+ + +F D DF+ + G++ + + P Sbjct: 1 MKFIKWLIALLVTLVVAVTVYLTVFFDPNDFKPEIVNAVKKQTGREFVIADDLSWTFFPT 60 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + E + ++ E +PL S +I + + +D +N Sbjct: 61 VGINLGGVSLSNPEGFTPKSMLEVNKAVAEVELMPLFSKQIEIAQLSLDGAKINLVTRKN 120 Query: 120 G-------------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 G S + ++ + + + I +ID+ Q L+ Sbjct: 121 GSSSLDGLTGNAAEKPATPAEPSAKAQLTSIDVGGVSITNTEINLIDEAKGQTQTLTLKQ 180 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 + A L+ +P+S F T + +I+L Sbjct: 181 FTLGAFSLDKFAPIS--------------------YEFAATMPDMTVSSKGEGQIKLSHD 220 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 ++I+ V G+ L + ++ + V Sbjct: 221 FNQLVIE------------KLDIETQVEGEGIPNKKLT---AEVSVNSQIALDKKQVSAD 265 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEE-NLLNFSENGAESMHD---LNETDFFEEEEKKNK 342 KL ++ N+ K V+ + +N + D ++ Sbjct: 266 ISKLTAMDINA----TGKLAVNYGGKVPQINADFQLGDIDLDALLPKSDTAEKQTAATPT 321 Query: 343 NDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMIL 380 + D+ + + N S ++ Sbjct: 322 QTQAAEPDLTALNGLDAKLTLAVKSIKVANLSTQNWLM 359 >gi|307546608|ref|YP_003899087.1| AsmA protein [Halomonas elongata DSM 2581] gi|307218632|emb|CBV43902.1| K07289 AsmA protein [Halomonas elongata DSM 2581] Length = 774 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 97/347 (27%), Gaps = 40/347 (11%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +LR +L +G L V + V F D D + G ++ + G + P Sbjct: 4 ILRTLLATIGILGLVAVGAVVFVTTFFDPEDLKPRLVEVVREHSGLELELDGPLSWSFYP 63 Query: 61 FPSVFFKDIRIDQK---EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 V + D + + + F PLL GEI + + I+ LN Sbjct: 64 RLGVAVETAEARLPTQSPDDRPFAAFDHAEVSLAFAPLLRGEIAIDGLTIEGLLLNLARD 123 Query: 118 SKGVSNWFQRKSTMDMIHN---------------------------VILEKIHVKGGRIK 150 G NW ++ + + + V G++ Sbjct: 124 ESGRGNWETLIEQLESRGEAAESVLAPASAGPNPDATVDESGLSVALNIASVQVHQGQVN 183 Query: 151 IIDQESDQVYFLSDLNLQISARFLNIISPLSI--------DSIKGSVIAEGTGNFDNKRS 202 D ++++ L LN+ + PL+ D + + Sbjct: 184 YRDAQAERHVTLEQLNISGRNVNPDRPFPLNASLRVLLDNDLDTEAATLVSDLILKTQVD 243 Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262 ++ +L I+L + + + LL+ Sbjct: 244 LGLAEGRHVLSKLSLQTDSRLGDSQDQQKINLDAAEAILDLGKQ-QLTVTDGQLDTSLLH 302 Query: 263 LELSAKKSRLSGNFKIS-DGNVRISRYKLQSILPNSSTDEDNKTKVS 308 L K+ L+ F++ D + ++ + + + Sbjct: 303 PRLGEKRLPLAMGFQLDADLQAQTAQLRELHLTGPDGLALTGNLNLD 349 >gi|117920815|ref|YP_870007.1| AsmA protein [Shewanella sp. ANA-3] gi|117613147|gb|ABK48601.1| AsmA protein [Shewanella sp. ANA-3] Length = 606 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 44/378 (11%), Positives = 104/378 (27%), Gaps = 58/378 (15%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF-- 79 + +F D DF+ + G+++ + + P + I + E + Sbjct: 21 YLTVFFDPNDFKPEIVNSVKKQTGRELVIGDDLSWTFFPTVGINLGGISLSNPEGFTPKA 80 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG-------------VSNWFQ 126 ++ E +PL S +I + + +D +N G + Sbjct: 81 MLEVNKAVAEVELMPLFSKQIEIAQLSLDGAKINLVTRKNGSSSLDGLTGKGAEKTATPA 140 Query: 127 RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186 S + ++ + + + I +ID+ Q L+ + A L+ +P+ Sbjct: 141 EPSAKAQLTSIDVGGVSITNTEINLIDEAKGQTQTLTLKQFTLGAFSLDKFAPM------ 194 Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 F T + +I+L ++I+ Sbjct: 195 --------------AYEFAATLPDMTVSSKGEGQIKLSHDFNQLVIE------------K 228 Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 V G+ L + L+ + + KL ++ N+ K Sbjct: 229 LDIETQVEGEGIPNKKLT---AEVSLNSQIALDKKQLSADISKLTAMDINA----AGKLA 281 Query: 307 VSQDEE-NLLNFSENGAESMHD---LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKD 362 V+ + +N + D ++ + D+ + Sbjct: 282 VNYGGKVPQINADLQVGDIDLDALLPKSDTAEKQAAATPSQTQAVEPDLTALNGLDAKLT 341 Query: 363 NSHDKENQENFSGDKMIL 380 + N S ++ Sbjct: 342 LAVKSIKVANLSTQNWLM 359 >gi|85706247|ref|ZP_01037342.1| AsmA family protein [Roseovarius sp. 217] gi|85669411|gb|EAQ24277.1| AsmA family protein [Roseovarius sp. 217] Length = 632 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 40/372 (10%), Positives = 86/372 (23%), Gaps = 21/372 (5%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED 76 L F+ Q + G+++ + G I P V + + + Sbjct: 2 LAIILGALFFLPGERIARIAADQISKATGRQVTMSGDTTISFYPILGVSTGAVEVANADW 61 Query: 77 GS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134 + + L + E L G+IR+ + P + +S G NW + Sbjct: 62 SDAGPMLRADSLKIGVEPQALFGGDIRITGLEAVNPEIRLERASDGRVNWELGVEGVAPS 121 Query: 135 HN------------VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + L++ + G + D + V +++ + + + Sbjct: 122 GQSGETLATSNRLALTLDRALITGSSLSYTDHTTGTVQAFRNMDFDLRWPDYDGTATFEA 181 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242 + + G D + + F L G L + Sbjct: 182 VLRQTANPVTLAGQLDQVGQFLDGAVTGLSARLSGPGGSVAFAGRGGAQPQLQGRLDIDL 241 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 + G L A + ++ + L S Sbjct: 242 G--DTDAFLAALGLDRLELPPGFGASVKGGTDLTLTDALDLSLRNLALNSG----GNAIA 295 Query: 303 NKTKVSQ-DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361 ++ + +N N + D E Sbjct: 296 GAADIALAGDVPRINAQLNAGALDLSRFAGADSTASGSADSGWSTSPIDASALALANGEV 355 Query: 362 DNSHDKENQENF 373 D N + Sbjct: 356 ALVADSINLGDL 367 >gi|253990363|ref|YP_003041719.1| assembly protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781813|emb|CAQ84976.1| protein asma [Photorhabdus asymbiotica] Length = 610 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 52/399 (13%), Positives = 120/399 (30%), Gaps = 62/399 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R+L L L V++ G + + ++ DFR +Q G + ++ ++ H+ P Sbjct: 1 MKRLLTTLVILLVVIIAGLAALVMLVNPNDFRAYMVKQVQKKSGYHLVMQDSMRWHVWPK 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + E + + E PLLS ++ V ++ + L SK Sbjct: 61 LSIITGRMSLTAPDATQPTVTAENMRLDVELWPLLSHQLAVKEVMLKGAVLQLTPESKSQ 120 Query: 122 SN---------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + +++I + + D + + D+NL + Sbjct: 121 KKENVPVAPKGKAVNPVAKGERWKLDIDRIKIADSLLIWQDDD-HSQLNVRDINLLMERN 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 N SV N + + AF ++AN + + + Sbjct: 180 NQNY----------ISVELSSKVNKNQQELAFNLSANVDISDYPHRVAGNID-------- 221 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD-GNVRISRYKLQ 291 S + + G + S K + + I + + + Sbjct: 222 ---------------SFDYQLQGVGIPTGGISGSGKVNAVYQEETIDEPQTISLQALNFT 266 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD---------LNETDFFEEEEKKNK 342 + + ++ K + + + D N+ + +N Sbjct: 267 A----NESELYGSIKAMLTTYPDYQINLSSKKLNLDNLVGWDLLAKNDAEVKRHYRIENN 322 Query: 343 NDDLKKDDIQYSVNKKEEK--DNSHDKENQENFSGDKMI 379 + K I S ++ + ++ DK I Sbjct: 323 SA---KPVIAVSSLEQPDYGAKFLNNFNANVTIDADKFI 358 >gi|90579101|ref|ZP_01234911.1| asmA protein [Vibrio angustum S14] gi|90439934|gb|EAS65115.1| asmA protein [Vibrio angustum S14] Length = 728 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 45/432 (10%), Positives = 126/432 (29%), Gaps = 70/432 (16%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L L + VV++G + ++ F+ Q G+++ ++G I P Sbjct: 1 MKKLLYVLIGIIIVVVLGITALVTLVNPNQFKAAIAEQVKKQTGRELDIRGDINWRFFPT 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + ++ + + + + LPLLS E+ + + +D H+ Sbjct: 61 LGLSVGETTLNNPQGFAQPNLIQFKQAELSVSVLPLLSHELDIGKVRLDGAHVFVQTLKD 120 Query: 120 GVSNWF------------------------------QRKSTMDMIHNVILEKIHVKGGRI 149 G SN + L + + + Sbjct: 121 GRSNLDGLTEKSSNKEVNDSTPSKANKDAVVQDKKSTESKVTTQPWKISLAGVELINASV 180 Query: 150 KIIDQESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNF-------- 197 II+ ++ L+ +N + + +S + K +G+ Sbjct: 181 DIINDKTASNIALNKVNFTLDKLTPNTWTKATFDISGSANKLKFATKGSAELILSSAYQL 240 Query: 198 -DNKRSAFKITA-NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV----- 250 + K +TA + + K + + F ++L + E + G Sbjct: 241 AELKNLDLSLTAQDGKTEIKHAQVTLDHFQYGQWATVNLNIDGQLPELAFVTKGQTQFKL 300 Query: 251 ------FSVAGDFSKLLNLELSAKKSRL------SGNFKISDGNVRISRYKLQSILPNSS 298 ++ + + ++ + ++ ++ +S+ L + Sbjct: 301 SSDRNILTLENLSIDNALSGKALPRPKMQVNIKTNASYDLTTKTATLSKLNLNA----DE 356 Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358 + ++ F+ + D N ++ + + D + + + Sbjct: 357 LALMGDVSFINRDVPVIRFNLSSDNINVD-NW--LNKQHGQVSSEKTAASDQAANNASTE 413 Query: 359 EEKDNSHDKENQ 370 +Q Sbjct: 414 IAASTPQQTSSQ 425 >gi|154253210|ref|YP_001414034.1| AsmA family protein [Parvibaculum lavamentivorans DS-1] gi|154157160|gb|ABS64377.1| AsmA family protein [Parvibaculum lavamentivorans DS-1] Length = 587 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 115/351 (32%), Gaps = 24/351 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R+ L + ++++ G F+D F+ E A G+ + ++G + I Sbjct: 1 MRKFLR-FVVVLALLVAGGLYALTFVDLGRFKPQIEAAAQDATGRTLKIEGPLNIGFSLV 59 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 P+V + I + G E L ++ LPLL+G + V ++ ++ + + Sbjct: 60 PTVVTEKISFQNADWGTRPQMVTAEKLRLQLALLPLLTGNVDVREVTLEGADVYLETDRR 119 Query: 120 GVSNWFQRKSTMDMIHNVILEK---------IHVKGGRIKIIDQESDQVYF--LSDLNLQ 168 G NW ++ + I ++ I D ++ +V +++L Sbjct: 120 GRGNWEFGEAGAQPAADESAGGGMSLAGVPQIEIRNLAIAYRDGQTGKVSDGSFEEVSLL 179 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 A +++ + K S A+ G+ + + + L + + Sbjct: 180 DRAGGFHVVVEGIVTGSKVSFSADVEGDMQQATLS-DASLTVAGTSIGGDLALDMRNRP- 237 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 + L G F G FS+ + + + ++ G +R + Sbjct: 238 KLTGALSGTAFDVTPFLSGGGEGKGGPVFSRDPLPLDALTVA--DADIDLTLGELRYGKV 295 Query: 289 KLQSILPNSSTD---EDNKTKVSQDEEN-LLNFSENGAE--SMHDLNETDF 333 L S+ L + +G D+N +F Sbjct: 296 SLTSLKLPLKLTGGKLAAPLTAEYRGSPVKLAINADGGANRVNVDVNAANF 346 >gi|94272337|ref|ZP_01292107.1| Uncharacterized protein involved in outer membrane biogenesis-like [delta proteobacterium MLMS-1] gi|93450161|gb|EAT01479.1| Uncharacterized protein involved in outer membrane biogenesis-like [delta proteobacterium MLMS-1] Length = 550 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 98/283 (34%), Gaps = 28/283 (9%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKI 83 FID +E G+++ + G ++ + P + I + D ++ Sbjct: 49 FIDPNKQKERIAAMVYEQTGRELRIDGELEWGLWPRLRLAGDSITLGNAPDFGPEPFLEL 108 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW------------FQRKSTM 131 + S+ PL+ E+R+ + + HLN +++G+ NW + Sbjct: 109 DSFSLAVATWPLIRSEVRLDLVEVSGLHLNLARNAEGIGNWEDLAGEPEPTAKPAAPGSP 168 Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS------- 184 + L + ++ R+ D+ S Q + DLNLQI A L + +D Sbjct: 169 LPFAALALGGVDIRDLRVDWHDESSGQRAAIYDLNLQIGALSLGEPIEMELDFQAASNQP 228 Query: 185 -IKGSVIAEGTGNFDNKRSAFKIT---ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 + S +GT +D + + + A+ + L +D L Sbjct: 229 DLAASGQLQGTLVYDLRGRHYALQPLHASLDLSGPTVPGGQAELTLRGLFELDEKAGLAR 288 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 + +G+ + G ++ L + G + ++ Sbjct: 289 VDDF-RLAGLGMLVGATMEMEGLHTD--QPGCRGEIQADINDL 328 >gi|152985263|ref|YP_001351202.1| hypothetical protein PSPA7_5883 [Pseudomonas aeruginosa PA7] gi|150960421|gb|ABR82446.1| hypothetical protein PSPA7_5883 [Pseudomonas aeruginosa PA7] Length = 750 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 113/359 (31%), Gaps = 52/359 (14%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KEDGSFE 80 + D D++++ + A ++ +KG I + P+ + D I Sbjct: 25 ALTHLFDPNDYKDEIRQIARDKANLELDLKGDIGWSLFPWLGLELHDTSIASVATPTRPF 84 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW---------------- 124 + ++ L + LPLL ++++ + ++ L+ +G NW Sbjct: 85 ADLQMLGLSVRVLPLLRKDVQMSAIRVEGLSLDLVRDKQGKGNWENIGKPAQPQAPAAPS 144 Query: 125 ------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 + + + ++ ++V R+ D+ S + Y + + Sbjct: 145 ATPPAADGKGAQAQAPEQAPQNDSPRPPIKLDIDSLNVNNARVTYTDEASGKQYNVEGIE 204 Query: 167 LQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF---KITANFPAKNK 215 L A L +++ ++ G FD + + A + Sbjct: 205 LSTGAIREGSSIALKLNAYLGTNQPVMRAKTELTGNLRFDTALKRYQLEDARLSGEASGE 264 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 + K F +++D + + G L K ++ SG Sbjct: 265 PLQGKTVTFSAQGQLLLDQSAQIAEWNGLKLSVNQLRALG----ELKARELDKDAKFSGG 320 Query: 276 FKISDGNVR-ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 I+ N+R ++ + + K +++ N S N + L++T F Sbjct: 321 LSIAPMNLREFLAGIGVTLPAMADANTLGKFELNTRLAGSRN-SLNLEDLKLGLDDTAF 378 >gi|62182114|ref|YP_218531.1| hypothetical protein SC3544 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62129747|gb|AAX67450.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322716602|gb|EFZ08173.1| AsmA [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 686 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73 DW+ + ++ + + + A++G + + +P+P +DI + Sbjct: 28 TFDWSRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHAHAEDIILGN 87 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 D + + L LL+ + + + + +P S+ +NW Sbjct: 88 PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLTQD 147 Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + L+ I GRI I D+ S + ++ + ++ Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206 Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236 + K + + G ++ + ++++ +Q + + G Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286 + K +GD L RL +V Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326 Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344 + + + + L + DL + K+ Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 + K Q K + + + F DK Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409 >gi|241760272|ref|ZP_04758367.1| AsmA family protein [Neisseria flavescens SK114] gi|241319150|gb|EER55628.1| AsmA family protein [Neisseria flavescens SK114] Length = 702 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 51/389 (13%), Positives = 127/389 (32%), Gaps = 39/389 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ ++ + L + V + + + + ++ + G ++ I LP Sbjct: 14 LKTLVFSIAVLLCLAAVLSALMFRIFNTENIDAFIQKNFSAH-GCQVKYNANISRKWLPR 72 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P++ KD+ + E + I + + L S + + P L + Sbjct: 73 PTLILKDLSLSSSEPDTPTLSIAESKISFGWSSLWSDAPIIEKWILSNPSLTLGPKN--- 129 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + L ++ + G I+ ++E Q L+DL + Sbjct: 130 HLPACLQQNHTSKESFQLNRVIINSGNIRYHNKE--QDIALNDLQFSLR----------R 177 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK-----AISLKIQLFPLAYPIIIDLFG 236 DS GT +++ + + ++ L +Q L + + G Sbjct: 178 ADSDGRPFDISGTLQNIGNPISWQGAGHLVQDDAGWSVPSLKLNLQTVLLKNKLDAQIAG 237 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 +L W + ++ F++ S NL ++A+ L + +G + ++ + Sbjct: 238 SLNWQNQTALFR-DFNLQ-AESNYQNLHINARSPLL----QFKNGYLHLNTLNGALTAGS 291 Query: 297 SSTDEDNKTKVSQDEENLLNFSE-----------NGAESMHDLNETDFFEEEEKKNKNDD 345 + D K+ + + + ++ + +++ + + Sbjct: 292 ENNQWDGSFKLDKANLYPTVLTAANFELKGSHKNDRLQTNFTFSSPLVWQKGKGIDA-PK 350 Query: 346 LKKDDIQYSVNKKEEKDNSHDKENQENFS 374 L +Q ++N+ E Q NFS Sbjct: 351 LHLSTLQDTINRLPRPRFISTLEGQANFS 379 >gi|289209643|ref|YP_003461709.1| AsmA family protein [Thioalkalivibrio sp. K90mix] gi|288945274|gb|ADC72973.1| AsmA family protein [Thioalkalivibrio sp. K90mix] Length = 742 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 47/376 (12%), Positives = 110/376 (29%), Gaps = 70/376 (18%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SF 79 + D D++E E + G+++ ++G I + + P + ++ R+ E Sbjct: 24 YLVATFDANDYKERIEAEVRDATGRELTLEGPIGLTLFPNLGLRLEEARLGNAEGFGDDP 83 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI----- 134 ++++ + + +PLL E+ V + D LN G +NW + Sbjct: 84 FAELDVVDVSLAVMPLLRRELDVRHIEADGVRLNLARDEDGRTNWEDLTERAEQARDEAV 143 Query: 135 -----------------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 + + + + R+ D+ + L L++ + Sbjct: 144 TGDNGEERTATESRLAMERIGIAGVTLTNTRVHWDDRMTGLQATLDPFRLEVGRFRPGVE 203 Query: 178 SPLSIDSI----------KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 +PL ++++ G + + + + N + P+ Sbjct: 204 TPLEMEAVIRAEGGDLDEPVEFAMGLEGLMNVDLLSNRYSIRRLNANFGVEGAGLPRPVG 263 Query: 228 YPIIIDLFGNLFWN-----------EKQPIYSGVFSVAGD-----------------FSK 259 + D+ + +G+ +AG Sbjct: 264 ISLETDVALEVADETKMRFERVTAGLGDARLTGLIELAGLGAGEELSVRSELRSNTFSVP 323 Query: 260 LLNLELSAKKSRLSGNFKISDGNVRISRY-KLQSILPN------SSTDEDNKTKVSQ-DE 311 L L + + + + +S L S+ N T + E Sbjct: 324 DLMEGLGLEPPQTNDPDAFKRVALDLSASGSLTSLELNPFLITVDDTRLTGNARWDTSGE 383 Query: 312 ENLLNFSENGAESMHD 327 L +F+ +G E D Sbjct: 384 RPLFDFNLSGNELNLD 399 >gi|551799|gb|AAA23670.1| ORF; may be in an operon with dcd gene; putative [Escherichia coli] Length = 200 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 77/211 (36%), Gaps = 20/211 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR+ +Q G ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + + + LPLLS ++ V + + + ++ V Sbjct: 61 LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120 Query: 122 ---------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + D + + + V + E D+ + ++ LQ+ Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203 + GS G N D + Sbjct: 180 PQHR----------GSFEFSGRVNRDQRDLT 200 >gi|119944777|ref|YP_942457.1| outer membrane protein assembly protein AsmA [Psychromonas ingrahamii 37] gi|119863381|gb|ABM02858.1| outer membrane protein assembly protein AsmA [Psychromonas ingrahamii 37] Length = 640 Score = 113 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 112/318 (35%), Gaps = 33/318 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ L L +++V + ID D+++ + Q + + +A+ G I P Sbjct: 1 MKLFLKLFAGLVVLLIVAVVLLITTIDPNDYKQQIQTQVKKSINRDLAINGDISWAFYPQ 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 +I + + KI+ S+ + +PLL G+I++ ++ ++ +N + Sbjct: 61 LGFSSGEIELRNLDGFNRQNLLKIDQASLGIDLVPLLKGQIKIGELTVNGLVVNLITNKN 120 Query: 120 GVSNWFQRKSTMDM---------------------IHNVILEKIHVKGGRIKIIDQESDQ 158 G SN +++ + N+ L I++ +I+I D ++ Sbjct: 121 GRSNLDNMQASGAPDPKEKAPEKDISSETEKGFFALENLQLAGININDAQIEIQDLKAAT 180 Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218 + + +Q+ + LS+ + + + +K A+ Sbjct: 181 THKANIKKIQLGKFSPGQETDLSVQADLILDNLQAQLDLQSKLLVAS-------DFSAVE 233 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278 LK G + + + + ++L +L + K +LSG + Sbjct: 234 LKQFSLTTLLTGETLPNGKV---DGSINTDIKYDLNNAKAELTDLIIKLDKIQLSGQLSV 290 Query: 279 SDGNVRISRYKLQSILPN 296 + R+ L+ + Sbjct: 291 QTKQLTTVRFALKGNQWD 308 >gi|163737729|ref|ZP_02145146.1| AsmA [Phaeobacter gallaeciensis BS107] gi|161389255|gb|EDQ13607.1| AsmA [Phaeobacter gallaeciensis BS107] Length = 650 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 95/338 (28%), Gaps = 24/338 (7%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 +++I + V +V L + + Q G+ + G + + P Sbjct: 2 KLIIRVVIALVVAMVLLLGALLLLPGEKLAQLAAAQIEKQTGRTVTFGGRVGYTLWPTLG 61 Query: 64 VFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 V + + E L++ L++G++RV ++ P LN + G Sbjct: 62 VKADRVALSNAPWAGPEPMLTAERLTIGVAAADLIAGKVRVTELSAVLPQLNLSTRADGT 121 Query: 122 SNWFQRKSTMD------------MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 NW ++ V +E +++ G ++ + + ++L + Sbjct: 122 GNWVLDPASDGETKSVPATPGSMDSLPVSIEALNLTGATLRYA-PHGETPIEMKQIDLAL 180 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 I + F+ + ++ L + Sbjct: 181 QWPDPTGTVVADITLRPAGDPVQIEAEIG----TFEAFLAGQVSSVGATVTAADTFLRFD 236 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI-SDGNVRISRY 288 + G S+A + + K L + +DG + + Sbjct: 237 GRANTAGAATGRMTGKSTDLARSLAVLGAAQGIEVPAVKTWLLGSDLTYTTDGRLALRDL 296 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 L++ + V+ + + +G + Sbjct: 297 TLEA----DANKLRGAADVTLGDVPKVTARLSGDQLDL 330 >gi|56695847|ref|YP_166198.1| AsmA family protein [Ruegeria pomeroyi DSS-3] gi|56677584|gb|AAV94250.1| AsmA family protein [Ruegeria pomeroyi DSS-3] Length = 645 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 43/374 (11%), Positives = 102/374 (27%), Gaps = 24/374 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R ++ G + V L + Q G+++ V G +K+ P Sbjct: 1 MRWIVRI-GITLVLAAVVMIGALLLLPGDRLARLAIEQIRKQTGREVTVAGEVKLSFWPV 59 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V + + + S + +GL++ LL GE+R+ + P L +K Sbjct: 60 LGVETGPVTVANADWASAAPMLQAQGLAIGVAAPALLGGEVRITRILAQDPVLRLET-AK 118 Query: 120 GVSNWFQRKSTMDMIHN-----------VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 G NW + V L+ + ++ R+ + +E + ++L Sbjct: 119 GRVNWEFSPTGASGGAATPSGGGSGGQLVTLDGLDLRNARLIYV-EEGKTSFDFGGVDLS 177 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 S + + G+ + + +N + + + + Sbjct: 178 ASWPATDAPLKMEARLEPGAGPISVDLDLAD----LSAFSNGQVSAMQMKMTAPKTSITF 233 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 + G L +A ++L + + + R Sbjct: 234 DGRASIDGALAGAAVLDTSDSAAMLAAFGQAGISLPRGLGQ---RADLRAQITYTADGRL 290 Query: 289 KLQSILPN-SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347 L+ + + + V+ + + + + Sbjct: 291 ALRELAADLDGNRLNGAADVTVADPPQVTARLTAGALDLTGLAAAGGTGSGRSDAASGWS 350 Query: 348 KDDIQYSVNKKEEK 361 +D I S Sbjct: 351 EDAIDASALALANG 364 >gi|254504177|ref|ZP_05116328.1| AsmA family [Labrenzia alexandrii DFL-11] gi|222440248|gb|EEE46927.1| AsmA family [Labrenzia alexandrii DFL-11] Length = 970 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 59/394 (14%), Positives = 130/394 (32%), Gaps = 56/394 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R+LIGLG +V+ VP F+ ++ +Q G ++ + G + + + P Sbjct: 1 MQRLLIGLGSFLFLVVTALLVVPFFLPKDQIKQQVVQQIDNRFGWRVRLDGPVSLSLFPG 60 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + +DI I +K + + + LLSG ++V + +D+P + ++ Sbjct: 61 FQLTAEDIGISGAAGADGIEFAKAKRMDFGLAWSGLLSGNVKVTGIALDEPLIYLEKNAN 120 Query: 120 GVSNWFQR-----------------------------------KSTMDMIHNVILEKIHV 144 G ++W R + ++ ++ + + Sbjct: 121 GATSWAPRRSLEVLTGEAEETSAPESAKAQSAPDSVAENNAGDSGGEGYLESIGVDSLQI 180 Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD---NKR 201 G++ ID +DQ + + LNL ++A L L+ D V E +G Sbjct: 181 TSGQLTYIDATADQNFVIQALNLSLAAPDLTGDVQLTSDFQFQDVPLEISGTLSNPLGLA 240 Query: 202 SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261 S ++ + + S+ ++ P+ +L P + ++ G Sbjct: 241 SGDQVPVDLALTSSENSITLKGTTGLEPVRAELEIAAS----GPSLKTLAALGGQSL--- 293 Query: 262 NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321 + + + S+ V +S L L +G Sbjct: 294 --DADPGAFQFDAKVRGSEAAVSVSDLHLVLGQL----SLGGAADADLSG---LVPEVSG 344 Query: 322 AESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV 355 + D + D ++ L D+ + Sbjct: 345 RLVLKDGSIADLLLLAGQELPASGLLSADLAFET 378 >gi|113970501|ref|YP_734294.1| AsmA family protein [Shewanella sp. MR-4] gi|113885185|gb|ABI39237.1| AsmA family protein [Shewanella sp. MR-4] Length = 606 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 44/398 (11%), Positives = 112/398 (28%), Gaps = 58/398 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + + L ++V+ + +F D DF+ + G++ + + P Sbjct: 1 MKFIKWLIALLVTLVVAVTVYLTVFFDPNDFKPEIVNAVKKQTGREFVIADDLSWTFFPT 60 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + E + ++ E +PL S +I + + +D +N Sbjct: 61 VGINLGGVSLSNPEGFTPKSMLEVNKAVAEVELMPLFSKQIEIAQLSLDGAKINLVTRKN 120 Query: 120 G-------------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 G S + ++ + + + I +ID+ Q L+ Sbjct: 121 GSSSLDGLTGNAAEKPATPAEPSAKAQLTSIDVGGVSITNTEINLIDEAKGQTQTLTLKQ 180 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 + A L+ +P+S F T + +I+L Sbjct: 181 FTLGAFSLDKFAPIS--------------------YEFAATMPDMTVSSKGEGQIKLSHD 220 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 ++I+ V G+ L + ++ + + Sbjct: 221 FNQLVIE------------KLDIETQVEGEGIPNKKLT---AEVSVNSQIALDKKQLSAH 265 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEE-NLLNFSENGAESMHD---LNETDFFEEEEKKNK 342 KL ++ N+ K V+ + ++ + D ++ Sbjct: 266 ISKLTAMDINA----TGKLAVNYGGKVPQISADFQLGDIDLDALLPKSDTAEKQTAATPT 321 Query: 343 NDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMIL 380 + D+ + + N S ++ Sbjct: 322 QTQAAEPDLTALNGLDAKLTLAVKSIKVANLSTQNWLM 359 >gi|78356725|ref|YP_388174.1| hypothetical protein Dde_1682 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219130|gb|ABB38479.1| Uncharacterized protein involved in outer membrane biogenesis-like protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 1095 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 58/444 (13%), Positives = 122/444 (27%), Gaps = 74/444 (16%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR + G L +V+ + + + +D E + +G + G + + + P Sbjct: 52 LRTLYYIAGGLAAVLFLCIAGLSVLVDSEALGRALEDMVSRELGVVCRINGAVDVGVFPR 111 Query: 62 PSVFFKDIRIDQKEDGS---FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 P + D+ ++Q + S + + + G I + ID+P + + Sbjct: 112 PGISVHDVVLEQPQGFSGDAPLLTAATVRLDFSLSRIGEGVIELGQAAIDRPVIRLVRQA 171 Query: 119 KGVSNWFQRK-----------------STMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 G SNW S + N + +++ G++ D Sbjct: 172 DGRSNWQVISAFMGAGRQRQVSSGGWGSIPLRLENARYDGVYIAQGQLFFTDGLRGVSLA 231 Query: 162 LSDLNLQISARFLNIIS-----PLSIDSIKGSVIAEGTGNFD------------------ 198 ++L+ + L+ + + +G D Sbjct: 232 AANLDAAFDGGDRRFFTLEADVELTEAAAVQHIALKGELGLDSGGSPAGFVSDVAARGVV 291 Query: 199 ---NKRSAFKITANFPAKNKAISL-----KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250 +R + A N + + L I + G L P+ SG Sbjct: 292 TIMGRRLDTALDAAVSYDNASGEFAVSVTRAALDAAVVSGDISVAGALS---GTPVVSGR 348 Query: 251 FSVAGDFSKL-------LNLELSAKKSRLSGN--FKISDGNVRISRYKLQSILPNSSTDE 301 V L L L G+ F + + +S + + + Sbjct: 349 ADVEHLSLPFWFEFGQQLPDSLQHALDDLKGSLLFSLDREGLEVSDLRAEVLGM----AL 404 Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK-------DDIQYS 354 K VS ++ + + D+ D Sbjct: 405 RGKGAVSDFSAPVIYIDVAAEHLDVNAVFPELAPVPPATLPVADVSLPPVLVFGPDDAGG 464 Query: 355 VNKKEEKDNSHDKENQENFSGDKM 378 V+ + + + + NFSG + Sbjct: 465 VSVGYDIRIAAESFSVWNFSGQGL 488 >gi|239817075|ref|YP_002945985.1| AsmA family protein [Variovorax paradoxus S110] gi|239803652|gb|ACS20719.1| AsmA family protein [Variovorax paradoxus S110] Length = 669 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 49/366 (13%), Positives = 93/366 (25%), Gaps = 35/366 (9%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDG--SFESKIE 84 W R R + G+K + + + I L +V I + K E Sbjct: 34 PWDTLRGPVNRYVSEKTGRKFEITRRLDVGIGLRGATVKADGIEFANPPWAREPYLVKAE 93 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV 144 PL+S ++ + + + P L + G W K T D ++ + V Sbjct: 94 RAEFDIRLWPLVSRKVVIPRLALSSPTLGLQIEPDGRRTWALGKDTSDAGTVPVIGLMQV 153 Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204 G + + + DL+ +S PLS G + + Sbjct: 154 DSGAVDFL-----ATHLGVDLHADVSYDTSRGTLPLSY---------RIKGRYKGQPLTA 199 Query: 205 KITAN---FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261 + +++ A + G + + F + G L Sbjct: 200 EGRTGNVLQLKAAGQPPFPLEVDAAAGQTRLKASGTVTDFAELDGIQATFDLKGQTLGAL 259 Query: 262 NLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ-DEENLL 315 L LSG + ++ K + L + + + + L Sbjct: 260 FPLLGIALPETSPYALSGELRKRGKLWEVAGLKGRLGLSD----IAGDMRFDKAGQVPHL 315 Query: 316 NFSENGAESMH-DLNETDFFEEEEKKNKNDDLKKDDIQYSVN----KKEEKDNSHDKENQ 370 DL E+ K + K D E Sbjct: 316 AGELRSKVMDMDDLGPLIGLPPTERSAKAVEGVAPPPTIKAKRAPGAKVLPSAKLDFERL 375 Query: 371 ENFSGD 376 + + Sbjct: 376 RAMNAE 381 >gi|84499564|ref|ZP_00997852.1| AsmA family protein [Oceanicola batsensis HTCC2597] gi|84392708|gb|EAQ04919.1| AsmA family protein [Oceanicola batsensis HTCC2597] Length = 654 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 39/357 (10%), Positives = 93/357 (26%), Gaps = 44/357 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R + + +G + + LV + + + G+++ + G + + P Sbjct: 1 MRLIRLVIGMIIAFSLV-FVAGLFLVPGERIAQVAADELGRRTGREVRIGGEARFTLWPD 59 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V +RI + + + +++ + L+ +IR+ ++ + P + ++ Sbjct: 60 LGVTVDGLRIANADWSDNGPMFQAQRVTIGVDAAALIRRDIRIRTLHAEAPQILLERNAD 119 Query: 120 GVSNWFQRKSTMDMI--------------------HNVILEKIHVKGGRIKIIDQESDQV 159 G NW ++ + G + D + Sbjct: 120 GEGNWEVGGKAAVAATEAQPSGAAPAATAAAPVQRPAFTIDDAVITGASVYFADHRTGTE 179 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 D++L ++ G + T + T P + Sbjct: 180 VSQRDIDLTVAYPEAR-----------GPARIDLTLRPNGAPIRLSGTIADPRAFAEARI 228 Query: 220 K-IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS----- 273 + A G P G S+ + L L LS Sbjct: 229 SPVVFDLEAPSASGRFEGRASV---GPEAEGALSLDIADTGALARALGRADPGLSRGLGR 285 Query: 274 -GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 + R+ L+ +S + + DL+ Sbjct: 286 DLDLAAQVTLTRVGLLALREGRMSSGGNAATVAADLTTGGPRPRLNARVDAGPLDLS 342 >gi|163752237|ref|ZP_02159438.1| asmA protein [Shewanella benthica KT99] gi|161327867|gb|EDP99046.1| asmA protein [Shewanella benthica KT99] Length = 612 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 41/374 (10%), Positives = 110/374 (29%), Gaps = 28/374 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ V LF + + L D DF+ + G+ + + + P Sbjct: 5 MKIVKWFFVVLFLMFASLVAYLTLVFDPNDFKSEIVNAVKKQTGRDLIIAKDLTWTFFPS 64 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + DI + + K+ + E LPL S ++ + + +D +N Sbjct: 65 IGIELGDITLSNPKGFDNVSMLKVSKIVAEVELLPLFSKQVEIAKLNLDGLVVNLETRKD 124 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 G +++ +++ + L G + +D + + + + Sbjct: 125 GRTSFDGLQTSATEDKSAQLNDTTALSGSLSSLD-IGGVSITNTQIRISDKQAGTEQVFS 183 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 L ++ G G F +F I++ I + Sbjct: 184 LDYLTL-GKFSL---GEFATLEYSFSAEMPDMTLMSQGKGSIRVAQDMTQIQV------- 232 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 + ++AG+ L++S + V + +L + Sbjct: 233 -----KDFKITNAIAGEAIPNKKLDISLLT---QLEILLETKQVHLILDELNAG----DI 280 Query: 300 DEDNKTKVSQD-EENLLNFSENGAESMHD-LNETDFFEEEEKKNKNDDLKKDDIQYSVNK 357 K ++ + + + + + D L ++ K+ + + + + K Sbjct: 281 QAKGKVDIAYGHKVPQIIATLDLGDIDLDKLLPQTDKADKAKEKSQAEATQVEPDLTAMK 340 Query: 358 KEEKDNSHDKENQE 371 + + ++ + Sbjct: 341 SLDLTLALTAKSIK 354 >gi|226330818|ref|ZP_03806336.1| hypothetical protein PROPEN_04739 [Proteus penneri ATCC 35198] gi|225201613|gb|EEG83967.1| hypothetical protein PROPEN_04739 [Proteus penneri ATCC 35198] Length = 185 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 68/186 (36%), Gaps = 11/186 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R L L L V+L G + L I+ DFR + G K+ ++ ++ H+ P Sbjct: 1 MKRFLTTLAILLVVILAGLTALVLLINPNDFRGYLIERVEKQSGYKLTLQDDMRWHVWPK 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + + + E LPLLS ++ V ++ + + SK + Sbjct: 61 LSIISGKMSLTAPGAEMPLVTADNMRLDVELLPLLSHQLEVKEVMLKGAVVRQTPESKAI 120 Query: 122 SNWFQRKSTMD----------MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 + D + + K+++ I + + L D+NL + Sbjct: 121 PKILPPSTPRDISRQVIEPKTNNWQLNIAKVNISDSLIIW-QMKDGEQLNLRDINLSLKT 179 Query: 172 RFLNII 177 Sbjct: 180 DEKKTS 185 >gi|227820913|ref|YP_002824883.1| AsmA protein family precursor [Sinorhizobium fredii NGR234] gi|227339912|gb|ACP24130.1| AsmA protein family precursor [Sinorhizobium fredii NGR234] Length = 641 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 42/357 (11%), Positives = 102/357 (28%), Gaps = 29/357 (8%) Query: 6 LIGLGFLFSVVLVGA-FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64 + + ++ +G +PL + T R ER G K + G ++ P + Sbjct: 56 FVWSAAVGVLLAMGYNAALPLLVSTTGVRATMERTLDSWSGGKSRINGEPEVRFWPKLLL 115 Query: 65 FFKDIRI-DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 I D ++I ++ L L G+ + D+ + P + + G +N Sbjct: 116 TLPSATIESTGPDPRPLAEIGRITASFSPLSALLGDPTLEDISLVDPVITIERRADGTTN 175 Query: 124 WF-----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 W I + GR++++D+ + I Sbjct: 176 WQTPHWLAPPEAPASGRETAFGDIAIVNGRLRVLDRTAG----------GNDVDIAGISG 225 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKIQLFPLAYPIIIDLFGN 237 + S + A+ + ++ A+ I P A ++ + P+ G Sbjct: 226 TIKWPSFAERLSAQLSARLRDEEIAWAIVCEEPLALFARRNASLKTSITSAPVTFSFEG- 284 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLL--------NLELSAKKSRLSGNFKISDGNVRISRYK 289 + P SG ++ L L + + + +++ Sbjct: 285 VGNLSSVPFASGHLQMSATSLATLVQWYQGTSTETLPSGGLSIDTRVTTGEKTLKLDDLA 344 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346 +++ D + + + + + + ++ L Sbjct: 345 FTMGGASATGVLD--IALQDGKAPSVEGTLAFDRIDLNGVPVAALTPFGRDDRLWRL 399 >gi|255065813|ref|ZP_05317668.1| AsmA family protein [Neisseria sicca ATCC 29256] gi|255050131|gb|EET45595.1| AsmA family protein [Neisseria sicca ATCC 29256] Length = 708 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 49/382 (12%), Positives = 109/382 (28%), Gaps = 27/382 (7%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 + LI G + E + A + I I+ P P+ Sbjct: 13 KFLIFSLIAVIATAAGLYASVYNFFTPKRIETLTQSALQSTQRTIRFSPEIRRSWFPRPT 72 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 + K++ I I+ ++ + L + + + ++ + G + Sbjct: 73 LTLKNVVISYPNSTQAAIHIKETNIGIGWSSLWNDTPIIEKWVLKGADVSIERTENGKWS 132 Query: 124 WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII-SPLSI 182 L ++ V+ +++ + LNL+ +I Sbjct: 133 LQDLWQQPRNTA--TLNRLVVESSTLRLKLDNTPYTIEDFSLNLRSEDSDGRRFKIGGNI 190 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242 + + + G G + + I + + Q + I++ L W Sbjct: 191 RNPQFPLEWNGNGLLQTNAANWSIP--------ELRFEAQSRRDQNTVKINITSALDWQT 242 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 + S NL L+A+ L FK + ++ + P+S D Sbjct: 243 QNHTLQVSNINLRADSVQQNLHLTAQAPLL--IFKDNHLSLNTVSGAFTAGSPDSQW--D 298 Query: 303 NKTKVSQDEENLLNFSENGAESMH----DLNETDFFEEEEKKNKNDD------LKKDDIQ 352 K+ + + + + L +T F + L+ +Q Sbjct: 299 GSFKLDKTNLRPSVITLDSFDLNGRYKNQLRQTSFTVSGPMLWQKKTGLQSDSLRITTLQ 358 Query: 353 YSVNKKEEKDNSHDKENQENFS 374 +VN+ + + NFS Sbjct: 359 DTVNRLPQPRFISMLDG--NFS 378 >gi|256829729|ref|YP_003158457.1| AsmA family protein [Desulfomicrobium baculatum DSM 4028] gi|256578905|gb|ACU90041.1| AsmA family protein [Desulfomicrobium baculatum DSM 4028] Length = 682 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 55/406 (13%), Positives = 112/406 (27%), Gaps = 52/406 (12%) Query: 18 VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG 77 + A + L D D++ + G+++ + G I + P+ SV D+ + + Sbjct: 20 ILAGVLLLNFDPNDYKSQIVKSVRDNTGRELLISGDIGLEFFPYLSVSISDLELGNCQGF 79 Query: 78 S-FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM--- 133 S + G ++ LPLLS + V + I+ L G NW + Sbjct: 80 SGPFLTLSGAHLKTRLLPLLSSRLDVVAIDIEGLSLFLSRDESGRGNWMDLATPPSDDAS 139 Query: 134 ---------------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + +I++ +HV RI DQ S + + ++ + L +S + Sbjct: 140 APDKPVLARDKRVPFLAGLIVDGLHVSDARIVWDDQRSGENFEVAGIRLDVSDFAFGVPF 199 Query: 179 PLSIDSIK------GSVIAEGTGNFDNKRSAF------KITANFPAKNKAISLKIQLFPL 226 + + + D R I + ++ + Sbjct: 200 VVDTYARAKRGEITAELDFSAKATLDLDRLGVEDLAMKAILSGDSLPGSPETISLSADFF 259 Query: 227 AYPIIID--------LF-GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 + ID L G +GV VA K L Sbjct: 260 STDGRIDNGRMQGLGLDVGFSAQASSGTDINGVLDVARFNPKDAFTRLGLAFPDFKDPSA 319 Query: 278 ISDGNVRISRYKLQSILPN-------SSTDEDNKTKVSQDEENLLNFSENGAESMHDL-- 328 + + + K Q + V ++ + D Sbjct: 320 LEEVAFSCTLTKGQDGFAATNLRLVIDDQALRGRVAVHGRTNPQVDLDLHLDTLNLDRYR 379 Query: 329 ---NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371 + + ++N +L ++ +S N Sbjct: 380 MHSDPGEAQASSGSSDENIELPVKMMRKLNLNATLAVDSLTVYNLR 425 >gi|218887947|ref|YP_002437268.1| AsmA family protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758901|gb|ACL09800.1| AsmA family protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 711 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 58/429 (13%), Positives = 122/429 (28%), Gaps = 82/429 (19%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF------ 79 I+ D++ A G+++ G + + P+ V F + + D Sbjct: 29 TINPNDYKGRIADAARSATGRELVFDGDLSLSFFPWLGVAFGPMHLGNPPDFPKAGAPSA 88 Query: 80 -------ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------- 124 I+G +R F+PLLS + V ++ +D +LN ++ G +NW Sbjct: 89 ASGDDDIFLSIKGGGLRVAFMPLLSKRVEVAELMLDGLYLNLVRAADGRTNWDFAKPGQT 148 Query: 125 -----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 Q ++ V ++ + VKG + D + Q + DLN+ Sbjct: 149 PAATAAPAPQSTQSAQPAQPSASGGAPLAVAVDTLSVKGASLSFRDLGTGQQFRARDLNV 208 Query: 168 Q------------------ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209 +S + +I + LS+ + S + D Sbjct: 209 NVNGLAPGGDPADIRLAVAMSGQKPDIDADLSLAARVQSDLDGSVLRIDGLTVTLTPKGG 268 Query: 210 -FPAKNKAISLKIQLFPLAYPIIIDLF------------GNLFWNEKQPIYSGVFSVAGD 256 PA + L L P +D+ N + G+ ++ G Sbjct: 269 VVPAGIGKVELAGDLTVHTVPQRVDIARLSLSTPTLKVGANGTAALGAQSFEGLVTLTGS 328 Query: 257 FSKLLNLELSAKKSR---------LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 K + + ++ L + + + + + + T K Sbjct: 329 PRKAMEALGTPMRTADPKVLDALDLKLDVQAAPAKMDVRSITGKL----DDTAIQGKASA 384 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 ++ D ++ + K D + + K Sbjct: 385 VPGAVQVIRAELALDAIDVDRYLPPEGDKGKATEKGAAPTTDKGGKDGKAAPQDGTAEAK 444 Query: 368 ENQENFSGD 376 ++ D Sbjct: 445 KSLRTIDAD 453 >gi|88860822|ref|ZP_01135458.1| putative AsmA protein [Pseudoalteromonas tunicata D2] gi|88817035|gb|EAR26854.1| putative AsmA protein [Pseudoalteromonas tunicata D2] Length = 693 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 55/373 (14%), Positives = 118/373 (31%), Gaps = 38/373 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + L L V++ +P + G+ + +KG + + P Sbjct: 50 MKTLFKILAGLLLGVVLLIVALPFLVPVDYIVNKVSESVEKATGRTLVIKGDKTLAVFPS 109 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + D+ + + L+++ +L L G+I++ I QP + Sbjct: 110 LKLELNDVHFANIKGSEHADMVSMAQLAIQIPYLSALLGDIQLEKFVIRQPKIILEKMPS 169 Query: 120 GVSNW---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 G NW + + + +V L ++ + I ID ++ Y LSD Sbjct: 170 GKVNWQLFDAVAATTEQPTSAKGATQLPQGFDVSLGEVAIYDATISYIDHQTKAQYQLSD 229 Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI-SLKIQL 223 + L +++ S+ + G + ++ N AK A + Sbjct: 230 VEL-----------AVALPSLYQPLEVSGELVYQGQKFELVTQLNTLAKVIAGDDFTLGS 278 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF----SKLLNLELSAKKSRLSG-NFKI 278 + G + + +SG + GD + L AKK + Sbjct: 279 AIDSKLFNFKFDGLVA--KAGQDFSGSLDLKGDSVKQILTWQKIALDAKKDAFNQFELAA 336 Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE 338 + + L D + + V ++ L+ S + M +LN + E+ Sbjct: 337 TMHFANQKLTLTKLKLALDELDVNGQAVVDLAKK--LSISADVDLGMLNLNPYLPVKPEQ 394 Query: 339 KKNKNDDLKKDDI 351 + D + Sbjct: 395 VVAQEDKKQVSQP 407 >gi|258404248|ref|YP_003196990.1| AsmA family protein [Desulfohalobium retbaense DSM 5692] gi|257796475|gb|ACV67412.1| AsmA family protein [Desulfohalobium retbaense DSM 5692] Length = 704 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 44/384 (11%), Positives = 110/384 (28%), Gaps = 44/384 (11%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG-- 77 A + D+ + E G+K+ + G I + + P++ +D+ + + G Sbjct: 21 AAVFLVTYDYNALKPQIEAAVEKNTGRKLTLDGDISLALGLTPALVVEDVSLANAQWGSK 80 Query: 78 SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN-------------- 123 ++ ++ LPL + + + + + +++GVSN Sbjct: 81 PQMLEVGRFELQVALLPLFQRNVEIQRVVLRDTSVLVETNTQGVSNLTLHKPQAAAEPEQ 140 Query: 124 ------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 S + + L+ + V+ G I + D + V S L + Sbjct: 141 ETSPEAPSDAASQKGPLPGLELDNVLVENGSIDVRDAAGETVTSFSVQRLALQTLPNKD- 199 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA--KNKAISLKIQLFPLAYPIIIDLF 235 V G F+ + + T + + L + + L Sbjct: 200 -----------VQMTFDGQFNGQPLSMSGTVGPLQGLTDAQQQWPVDLAVQSGSASVALE 248 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF--KISDGNVRISRYKLQSI 293 G + Q S L + + ++G + + ++L S+ Sbjct: 249 GAIRDVFAQRGLDLDLSATIPEPAALKPLVGQEIP-VAGPIECTATLTDTAAKTFRLDSL 307 Query: 294 LP-NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 ++ L+ + + + D+ T + ++ Sbjct: 308 QVRQGENRLSGTVSLALG--PPLSVTADLTSPLLDV--TAITTQPSGDTAPPQEQQGASS 363 Query: 353 YSVNKKEEKDNSHDKENQENFSGD 376 + +++ D E + Sbjct: 364 AAGDQRVFPDTELPWEALRQINAQ 387 >gi|317153723|ref|YP_004121771.1| AsmA family protein [Desulfovibrio aespoeensis Aspo-2] gi|316943974|gb|ADU63025.1| AsmA family protein [Desulfovibrio aespoeensis Aspo-2] Length = 729 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 52/388 (13%), Positives = 111/388 (28%), Gaps = 48/388 (12%) Query: 2 LRRV----LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 +++V +IG G L ++ ++ D +++ R G+ + G I + Sbjct: 1 MKKVVKLGMIGAGILAALAVLALGVFIYTFDINNYKGAISRLVAEKTGRTVTFGGDIAMT 60 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + P V DI + + LPLLSG + + +D + Sbjct: 61 LFPRLGVRMADISLSNASGFGQPQMLSARQARLEVRILPLLSGRVSFGHLALDGVVVGLE 120 Query: 116 LSSKGVSNWFQRKSTMDMIHN---------------------VILEKIHVKGGRIKIIDQ 154 + G +NW + + + + + + D+ Sbjct: 121 RDATGRTNWGDLTDRVTSDPPAPDQGGAAGGAQSGQDTGSFVLEIAGVSLTESTLIWDDR 180 Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSID--------SIKGSVIAEGTGNFDNKRSAFK- 205 S L +++L P++ + G+V + D+ + Sbjct: 181 RSGVSVTLDNVSLTTGTIGGAEPFPVTAQCGVRSVDPELSGTVEFSASTVVDSAVISLSE 240 Query: 206 ITANFPAKNKAISL-KIQLFPLAYPIIIDLFGNLFWNEKQPI--YSGVFSVAGDFSKLLN 262 I A+ K + + A + +D+ G + + Y +AG Sbjct: 241 IVLTAKAEGKDVPGSSATVEVAADAVSVDMRGQTVRVDGLVVSGYQAAIRLAGS------ 294 Query: 263 LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA 322 L RL+ + + R S L ++ + + D + +G Sbjct: 295 LTGFGAGGRLAATVGLDPFDARQS---LAALGLDVPSTSDPSALTRVQGTADVVVDADGF 351 Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDD 350 E D + D Sbjct: 352 EIRGLDATVDDTRISGSFAHRVREDRPD 379 >gi|261379812|ref|ZP_05984385.1| AsmA family protein [Neisseria subflava NJ9703] gi|284797498|gb|EFC52845.1| AsmA family protein [Neisseria subflava NJ9703] Length = 697 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 54/389 (13%), Positives = 127/389 (32%), Gaps = 39/389 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ ++ + L + V + + + + ++ + G ++ I LP Sbjct: 9 LKSLVFSIAVLLCLAAVLSALMFRIFNTENIDAFIQKNFSAH-GCQVKYNANISRKWLPR 67 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P++ KD+ + E + I M + L S + + P L + Sbjct: 68 PTLILKDLSLSSSEPDTPTLNIAESEMGFGWSSLWSDAPILEKWILSNPSLTLGPKN--- 124 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + L +I + G I+ ++E Q L+DL + Sbjct: 125 HLPACLQQDPSSKESFQLNRIIINNGSIRYHNKE--QDIALNDLQFSLR----------R 172 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK-----AISLKIQLFPLAYPIIIDLFG 236 DS GT +++ + + A+ L +Q L + + G Sbjct: 173 ADSDGRPFDISGTLQNIGNPISWQGAGHLVQDDAGWSVPALKLNLQTVLLKNKLDAQIAG 232 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 +L W + ++ F++ S NL ++A+ L + +G + ++ + Sbjct: 233 SLNWQNQTALFR-DFNLQ-AESGYQNLHINARSPLL----QFKNGYLHLNTLNGALTAGS 286 Query: 297 SSTDEDNKTKVSQDEENLLNFSE-----------NGAESMHDLNETDFFEEEEKKNKNDD 345 + D K+ + + + ++ + +++ + + Sbjct: 287 ENNQWDGSFKLDKANLYATVLTAANFELKGSHKNDRLQTNFTFSSPLVWQKGKGIDA-PK 345 Query: 346 LKKDDIQYSVNKKEEKDNSHDKENQENFS 374 L +Q ++N+ E Q NFS Sbjct: 346 LHLSTLQDTINRLPRPRFISTLEGQANFS 374 >gi|77164017|ref|YP_342542.1| hypothetical protein Noc_0489 [Nitrosococcus oceani ATCC 19707] gi|254436027|ref|ZP_05049534.1| AsmA family [Nitrosococcus oceani AFC27] gi|76882331|gb|ABA57012.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707] gi|207089138|gb|EDZ66410.1| AsmA family [Nitrosococcus oceani AFC27] Length = 665 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 58/391 (14%), Positives = 125/391 (31%), Gaps = 28/391 (7%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 ML+++ I + +L+ + ID ++ ++ + G +K+++L Sbjct: 1 MLKKLFILFAIILISLLLLVILAGVMIDENRVKKWVSNYIEQEYDREFEITGELKLNLLS 60 Query: 61 -FPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 PSV K I+++ E + I + + EF PL+ G I + D+ I ++ L Sbjct: 61 LQPSVTAKGIKLENAEWADKPNMATIGKVFFQFEFFPLILGNINILDVEIRDGRISL-LE 119 Query: 118 SKGVSNWF-QRKSTMDMIHNVI---LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 + +NW + + + + + + L N+Q+ + Sbjct: 120 KQNKTNWDIFLPEEKKPPGYFSVEKIRNFRLNDFTVTYQSRVKKETHTLLAKNIQLQNFY 179 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 G D+ F++ L + L I + Sbjct: 180 STKR------------KGSFQGKVDSIPIGFQLNQKPINAENVDKL-LLLTGHIGTIELY 226 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 G++ + +G+ L K + + + + + Sbjct: 227 FTGDISDDFNLIRGKSRVKGSGETLLQLAELAGLKIKNFRSYDSFATIDANLEKMLINVN 286 Query: 294 LPNSST---DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350 + + K+ +E+ L G L+ DF +K + + D Sbjct: 287 QMDITYGQSQMTGTLKIDSNEKRTL---VRGDLLFPVLSSPDFRSLTKKSVAELEEETTD 343 Query: 351 IQYSV-NKKEEKDNSHDKENQENFSGDKMIL 380 I K+ EK D + E+F +K+ L Sbjct: 344 IDVKAQEKQSEKKKLFDDDPLESFIPEKLEL 374 >gi|222084925|ref|YP_002543454.1| hypothetical protein Arad_0961 [Agrobacterium radiobacter K84] gi|221722373|gb|ACM25529.1| conserved hypothetical membrane protein [Agrobacterium radiobacter K84] Length = 631 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 103/356 (28%), Gaps = 38/356 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R I L + V V T P I R E+ + G + ++G + P P Sbjct: 25 RTSGIVLLTILIVFAVFRATAPFLISSGLVRSGIEKALSDWTGYRAQIEGDPTLEFWPTP 84 Query: 63 SVFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 V + I + ++G I+ LS L G + + +P + G+ Sbjct: 85 RVTLNQVNIREPTKNGKVLGHIDSLSADFSLFAALRGRAHFHEFHFLRPTIYIRRDETGL 144 Query: 122 SNW----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 +W + M + + + ++ G +++ D+ + +Y ++ + Sbjct: 145 IDWTNEGLLSKAIERVETSANQGMPMRREQDADIGTLTIEDGTVEMADERTGNIYKMNGI 204 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 N I+ L+ + A + + + P A Sbjct: 205 NADITWPRLSR-----------PMTAVILARLNGQDVKIDFNSTQPLLLFAGKSVDARTS 253 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFK 277 + P+I + + +G ++ L+ + Sbjct: 254 FSSPLISWTYSGVSSISDFSTLAGNLDLSVPNVPSFLAWSGEHLPVANTLQNVSLNADIV 313 Query: 278 ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 +R + + +S D + + ++ + + + T F Sbjct: 314 AIQNGLRFNNLNFKVNDSAASGVMD--LNYTAAGKPKISGTLAFDQMNLNPFLTAF 367 >gi|298530580|ref|ZP_07017982.1| AsmA family protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509954|gb|EFI33858.1| AsmA family protein [Desulfonatronospira thiodismutans ASO3-1] Length = 645 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 101/332 (30%), Gaps = 70/332 (21%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ESKIE 84 +D+ + + E G +++++G I++ LP+ + + D +E Sbjct: 30 VDFNKHKPEVEAGIYNATGYEVSLEGDIELSFLPWLGIDVGKASVANPPDFEDENLGSVE 89 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------------------- 124 L +R + PLL G++++ + + +L+ ++G NW Sbjct: 90 ALQIRLKVWPLLLGQVQMDRVVLKGLNLDLVKDAQGRPNWIASRPEESREGVMLGSSLAY 149 Query: 125 ------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 Q+ S I + + + + I D +D + + DL+L + Sbjct: 150 AGENEPAQQDSGDIFIPALDIAGLEITDSNISYKDMGTDVHFRIEDLDLLTERIRQDEPF 209 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 L D + E G + A + K+I L +D+ Sbjct: 210 DLQSDMKFKNFSPELDGRI-----SLTTQALLQGEEKSIRLS----------ELDMD--- 251 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN--FKISDGNVRISRYKLQSILPN 296 L K +R+ G+ + ++ S +Q++ + Sbjct: 252 -----------------LDLSGEPLHEPVKDARIRGDIVYAFGANSMEFSELSIQALDAD 294 Query: 297 SSTDEDNKTKVS-QDEENLLNFSENGAESMHD 327 K D + G D Sbjct: 295 ----LSGKISARELDAVPQIRIDLEGDNLDLD 322 >gi|89073407|ref|ZP_01159931.1| Hypothetical AsmA protein [Photobacterium sp. SKA34] gi|89050894|gb|EAR56368.1| Hypothetical AsmA protein [Photobacterium sp. SKA34] Length = 730 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 45/438 (10%), Positives = 129/438 (29%), Gaps = 74/438 (16%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L L + VV++G + ++ F+ Q G+++ + G I P Sbjct: 1 MKKLLYVLIGIIIVVVLGITALVTLVNPNQFKAVIAEQVKKQTGRELDIHGDINWRFFPT 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + ++ + + + + LPLLS E+ + +++D H+ Sbjct: 61 LGLSVGETTLNNPQGFAQPNLIQFKQAELSVSVLPLLSHELDIGKVHLDGAHVFVQTLKD 120 Query: 120 GVSNWF--------------------------------QRKSTMDMIHNVILEKIHVKGG 147 G SN + L + + Sbjct: 121 GRSNLDGLAEKSSTKEVNDSTVPKADKDAVNNVQDEKSTASKVTAQPWKISLAGVELINA 180 Query: 148 RIKIIDQESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFD----- 198 + II+ ++ LS +N + + +S + A+G+ + Sbjct: 181 SVDIINDKTASNIALSKVNFTLDKLVPKTWTKATFDISGSANALQFAAKGSTELNLSSTY 240 Query: 199 --NKRSAFKITANFPAKNKAI---SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV--- 250 ++ ++ I + + F I+L + + + G Sbjct: 241 QLDELKNLDLSLTAQDGKTEIKHAQVALDHFKYGQWATINLNIDGQLPDLAFVTKGQTQL 300 Query: 251 --------FSVAGDFSKLLNLELSAKKSRL------SGNFKISDGNVRISRYKLQSILPN 296 ++ + + ++ + ++ ++ V++S+ + Sbjct: 301 KLSSDRNILTLENLSIDNALSGKALPRPKMQVNIKTNASYDLTTKTVKLSKLDANA---- 356 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKN---KNDDLKKDDI 351 + ++ F+ + D L + EK + + +I Sbjct: 357 DELALMGDMSFINRDVPVIRFNLSSDNINVDNWLKKQHGVVSSEKTAASEQAANNTSTEI 416 Query: 352 QYSVNKKEEKDNSHDKEN 369 S ++ ++ + + Sbjct: 417 AASTPQQLSSQSASNTQP 434 >gi|91776876|ref|YP_546632.1| AsmA [Methylobacillus flagellatus KT] gi|91710863|gb|ABE50791.1| AsmA [Methylobacillus flagellatus KT] Length = 893 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 57/384 (14%), Positives = 115/384 (29%), Gaps = 38/384 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81 + D++ + + + + G IK+ P I + + + Sbjct: 25 VFVATFNPNDYKPMIVQLVKDKKQRTLDIDGDIKLAFWPKLGADLGRISLSEHNGDKEFA 84 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR----KSTMDMIHNV 137 +EGL + +PLL ++ V +Y+D N G +N+ K Sbjct: 85 AVEGLKVSVALIPLLRKKLVVDAVYVDGARANIVRYQDGSTNFDDLLSEDKEESSQEIAF 144 Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSV 189 + I+V + D+ +D Y + NL+ L L+ + ++ V Sbjct: 145 DISSINVSNSAVSFHDEATDNTYAIEKFNLKTGRVALATPFDLASNFEVSASAPKVEARV 204 Query: 190 IAEGTGNFDNKRSAFKIT------ANFPAKNKAISLKIQLFPLAYPIIIDLFGN---LFW 240 +G D + F I A + + +++ A P ++ N L + Sbjct: 205 KLQGNFMADLESQHFAIQKLDTVVKGNIADVQEVDIRLTGDVDARPEHMEFLVNGLKLAF 264 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS----------------GNFKISDGNVR 284 + A + E+S K+ L+ + K S ++ Sbjct: 265 AGQLADAKLAADFAAPRLVVRQDEVSGDKAELTFSQQKTDQSIKAQLVLADIKGSPRELQ 324 Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQ-DEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343 S + L + ++K L F D+ + + + Sbjct: 325 SSGINGEFSLKQADRSVESKFSSPFKGNLEDLVFELPKLAGRIDIKDKALPKGAAQGEFA 384 Query: 344 DDLKKDDIQYSVNKKEEKDNSHDK 367 L D Q V+ D K Sbjct: 385 FKLLADVKQEKVDSDFSLDVEDTK 408 >gi|300024249|ref|YP_003756860.1| AsmA family protein [Hyphomicrobium denitrificans ATCC 51888] gi|299526070|gb|ADJ24539.1| AsmA family protein [Hyphomicrobium denitrificans ATCC 51888] Length = 778 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 54/369 (14%), Positives = 116/369 (31%), Gaps = 60/369 (16%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 + I FLF +++ GA L + R+ + G+++ + G P Sbjct: 45 LGIVYFFLFVLLVGGAGVAYLAFNPPSDFIRQRIADEVRSRTGRELVMAGPASFTFYPAI 104 Query: 63 SVFFKDIRIDQKEDGS-FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + KD+ + ++++ L + LLS + + + P +F + G Sbjct: 105 GISLKDVSLSGPPGMDGKLAQMQALDVSINASALLSRRAEIQSLVLRNPTFDFRIDKDGR 164 Query: 122 SNWFQRKSTMD---------------------------------MIHNVILEKIHVKGGR 148 NW IH++ L+ + ++GG Sbjct: 165 KNWQFASGPEPVRYAELQAQGTRADVAPFVMAAADAAPAAQSGIAIHDLKLDDVRIEGGT 224 Query: 149 IKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT- 207 + D+ S + + +N + L + S+ + A G + +K F + Sbjct: 225 FRFTDERSGRTEQVHGVNAK-----------LGLPSLSKPLTATGQFGWHDKLLNFDGSV 273 Query: 208 --ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 +A LK + D G++ +E G + D ++ L Sbjct: 274 SDVGNFKLQQAAHLKFKAKNDVLAASYD--GSVTLDEGVA-LEGQVNAQSDSARALAQWF 330 Query: 266 SAKKSRLSGNFKISDG-----NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320 + +SG +S + ++ ++ + +V+ + Sbjct: 331 GTRLPPVSGFGPLSIQGTLKTSGNVTDFQ-NAQFGLDGAVAKGTIRVTTGGVRPF-VEAD 388 Query: 321 GAESMHDLN 329 A S DLN Sbjct: 389 LAISELDLN 397 >gi|110835145|ref|YP_694004.1| hypothetical protein ABO_2284 [Alcanivorax borkumensis SK2] gi|110648256|emb|CAL17732.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 735 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 101/304 (33%), Gaps = 21/304 (6%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +L+ +LI L + ++ + F + ID +F+ + E+QA + ++G + P Sbjct: 4 LLKILLITLFAIIVLLAIAVFVITQVIDPNEFKPEIEKQAQEQANLTLDIQGDLAWQFWP 63 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 V +D + ++ S+ LPLL G++ + + + +N G Sbjct: 64 SLGVSLGRTEARIADDEELFAALDEASVSVAVLPLLYGQVEMDGITLAGLDVNLVDGPDG 123 Query: 121 VSNWFQRKSTMDMIH-----------------NVILEKIHVKGGRIKIIDQESDQVYFLS 163 + T + + K+ V G+++ + + Sbjct: 124 ANWEQIGPQTPAEDTATEEEPAAEEDSTSLDIPLTIPKVVVSDGKVRYRNTADGTDIIVE 183 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ- 222 NL L+ PL + S++ ++ + + N ++L Sbjct: 184 HFNLNAQDVNLDEPFPLQM-SLRYQDQSDMRVDMNLDTVLAADIDNNHFVLNPMTLDANI 242 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 P+ + L NL N + S + + + + L+G+ ++S Sbjct: 243 AGATTMPVDVHLEQNLDVNLNEDTVSIKDLLLQAAGTET--KGNVDITALTGDMQLSGKL 300 Query: 283 VRIS 286 Sbjct: 301 ATAP 304 >gi|294013437|ref|YP_003546897.1| AsmA protein [Sphingobium japonicum UT26S] gi|292676767|dbj|BAI98285.1| AsmA protein [Sphingobium japonicum UT26S] Length = 722 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 57/387 (14%), Positives = 120/387 (31%), Gaps = 35/387 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-F 61 R +L +G LF++ L+ T F + FER + + + V G +++ P Sbjct: 41 RILLWIVGILFALWLILFITKGRF-----LKHPFERMLGSRLERTVRVGGDFQLYFDPIA 95 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYLSS 118 + + I + + + R L L+ G+ ++ + + ++ S Sbjct: 96 IKFRAEHMAIANTPWASRPDFFRADLIDSRIAPLSLMFGDKYKLGWLELRNAAVDLEWSR 155 Query: 119 KGVSN---WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 G SN + + ++ ++ + + G ++ D +Q++A Sbjct: 156 DGRSNTWTFGDPDRKGEPLNLPLIRRALLAGTTLRYRDPR-----------MQLAADLGF 204 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK-AISLKIQLFPLAYPIIIDL 234 G V GTG +R + P + ++ L A ++++ Sbjct: 205 ETVKARDTRFAGDVRFSGTGTMRARRFTLRGGLLSPDETGTGGRNQLALQAEAGATVLEV 264 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYK 289 G L + G L L R + + G R + K Sbjct: 265 SGTLPGATEIEGADLRLLAHGPNLARLFDFLGVAIPETRAYRFTSALTKAGGEWRFTHLK 324 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349 + + + VS ++ L + A D+ + F + + K Sbjct: 325 GRFGDSD----LAGRLTVSL-PDDRLLLKADLATQSLDIIDVGPFIGYDPERLARQGKAG 379 Query: 350 DIQYSVNK-KEEKDNSHDKENQENFSG 375 I+ + D E NF Sbjct: 380 AIRTVGGAPRILPDAPLRVEALRNFDA 406 >gi|242280360|ref|YP_002992489.1| AsmA family protein [Desulfovibrio salexigens DSM 2638] gi|242123254|gb|ACS80950.1| AsmA family protein [Desulfovibrio salexigens DSM 2638] Length = 723 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 103/337 (30%), Gaps = 45/337 (13%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKI 83 I+ D++ D G+++ G +++ + P+ V I + + Sbjct: 29 LINPNDYKGDIADAVRDKTGRELVFDGDLELSVFPWIGVKTGGISLSNAAGFSEKNMFSL 88 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH-------- 135 + + + LPL+SG++ + ++ + L + GV+NW Sbjct: 89 KSADVSLKLLPLISGKVELKNVDVVDLQLFLMRNKAGVTNWDDLTGDKKSKPEEPKKSSP 148 Query: 136 -----NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 N+ ++++ R+ D++ D + D ++ + ++ + S Sbjct: 149 GKTELNLSAGGVNIQNARVVWDDRKEDVRQAVDDCDIIVEGFAPGSPFSFNVHVLLSSTK 208 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAIS-LKIQLFPL-------AYPIIIDLFGNLFWNE 242 E + + + K + + K ++ L + + + + L + Sbjct: 209 PEVKADIN---TTGKASISADFKQLSVKGLSVVVDGSGKAVPGGQGQVKVSGDAVLDMIK 265 Query: 243 KQPIY------------SGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV---RISR 287 G + G SK +N + + + Sbjct: 266 GSADVVGLVLDAYGMKAQGSLAAKGLNSKSMNFSGDMSIPGFNLKDTLDKMGMGVETADS 325 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 L S+ + + NK+ E L + + Sbjct: 326 KALTSVGMDFNYAGTNKSV----EIKDLQVNLDATTI 358 >gi|226940397|ref|YP_002795471.1| hypothetical protein LHK_01473 [Laribacter hongkongensis HLHK9] gi|226715324|gb|ACO74462.1| DUF748 multi-domain protein [Laribacter hongkongensis HLHK9] Length = 1169 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 92/265 (34%), Gaps = 14/265 (5%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68 +G + ++ L G R E Q + +G+ +++ G + +++ V + Sbjct: 13 VGVVTALTLAGLGVAVYLSGPLLLRGVAEEQLSEALGRPVSIGG-LTLNVF-TLGVTVGN 70 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR- 127 ++I + + + ++++ L + LL G+ R+ + +D P + + N Sbjct: 71 VQISEPDGSTPFARLDRLEVHFSPRSLL-GDWRIASLKLDTPDIRLVRFADNRFNISDLI 129 Query: 128 ---KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 ++ L ++ GRI + D+ + + + L L I P +D Sbjct: 130 ERFQTPSGEPVLFALANARIRHGRIVLDDRPLNHQHTIDRLQLTIPYVS---NFPADLDV 186 Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PIIIDLFGNLFWNEK 243 E + + + K + ++ ++ + + L + P++ L +L Sbjct: 187 STQP---EFSASINGKTVSLAGNSHVFRADRQTVMNLYLDGVDLAPMLAYLPVSLPVKIP 243 Query: 244 QPIYSGVFSVAGDFSKLLNLELSAK 268 +A L Sbjct: 244 SVRLDTRLRIAYSTPPKSIPSLDIS 268 >gi|94265676|ref|ZP_01289416.1| AsmA [delta proteobacterium MLMS-1] gi|93453803|gb|EAT04172.1| AsmA [delta proteobacterium MLMS-1] Length = 999 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 104/337 (30%), Gaps = 53/337 (15%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKI 83 FID +E G+++ + G ++ + P + I + D ++ Sbjct: 44 FIDPNKQKERIAAMVYEQTGRELRIDGELEWGLWPRLRLAGDSITLGNAPDFGPEPFLEL 103 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW------------FQRKSTM 131 + S+ PL+ E+R+ + + HLN +++G+ NW + Sbjct: 104 DSFSLAVATWPLIRSEVRLDLVEVSGLHLNLARNAEGIGNWEDLAGEPEPTAKPAAPGSP 163 Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA 191 + L + ++ R+ D+ S Q + DLNLQ A L + +D Sbjct: 164 LPFAALALGGVDIRDLRVDWHDESSGQRAAIYDLNLQTGALNLGEPIEMELD-------- 215 Query: 192 EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 + L G L ++ + Y+ Sbjct: 216 ---------------------------FQAASNQPDLAASGQLQGTLVYDLRGRHYALQP 248 Query: 252 SVAGDFSKLLNLELSAKKSRLSGNFKISDGN--VRISRYKLQSILP--NSSTDEDNKTKV 307 A + + L G F++ + R+ ++L + ++ + D Sbjct: 249 LHASLDLSGPTVPGGQAELTLRGLFELDEKAGLARVDDFRLAGLGMLVGATMEMDGLHTD 308 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344 + N + ++ E+ ++ + Sbjct: 309 QPGCRGEIQADINDLVRVLEIFESPLAQQLSGVRERT 345 Score = 37.2 bits (84), Expect = 4.4, Method: Composition-based stats. Identities = 35/343 (10%), Positives = 88/343 (25%), Gaps = 27/343 (7%) Query: 21 FTVPLFIDWTDFREDF-ERQATLIVGKKIAVKGGIKIHILPFPSVFFKD-IRIDQKEDGS 78 T+ D + RQ + + G ++ L + ++ + + Sbjct: 346 VTLASTFDANPAQGRILVRQLEARL-LGTTINGHLEATELGAVHPQVEGQLQAKGPDLPA 404 Query: 79 FESKIEGLSMRAEFLPLLSG-------------EIRVFDMYIDQPHLNFYLSS-KGVSNW 124 + L+ A+ L + I P+L + + S+W Sbjct: 405 LLAVAARLTPGADLANLPRALNGLRDRSLLMEADFASDQDEIVIPNLRLRGLATELTSDW 464 Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKIIDQE---SDQVYFLSDLNLQISARFLNIISPLS 181 R D + ++ + + D L ++ Sbjct: 465 RLRDPLGDKPQIKGVWRLAGDDLPLLLRLASVFNGGPEQQAKDAGQPQPGPELWAMAQRV 524 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 ++ + D ++ A A + +K +L D L Sbjct: 525 AEAGHNDFNFSSRLDLDLAAQRARVDALQAALLG-LEIKAELAASQIKEAADFDLELAVA 583 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 P + + + + ++ ++ S + I K+Q + Sbjct: 584 PFNPRQ--LLEILALEPPPTSDPRALRRLAINARAGGSLAQIDIEPLKVQL----DDSQL 637 Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344 + +++ L F+ N + D E+ + Sbjct: 638 TGQLRINNLNATDLAFTLNIDQLDLDRYLPPEAEKVPATPETA 680 >gi|254252293|ref|ZP_04945611.1| hypothetical protein BDAG_01514 [Burkholderia dolosa AUO158] gi|124894902|gb|EAY68782.1| hypothetical protein BDAG_01514 [Burkholderia dolosa AUO158] Length = 797 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 60/188 (31%), Gaps = 16/188 (8%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIR 70 + DW + Q + +G+ A+ G +K+ LP+P + + Sbjct: 49 FLVTFDWNRAKPWVNEQVSEALGRPFAINGDLKVDWRRPAGETGWRAWLPWPRLSATQLE 108 Query: 71 IDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128 I + ++ LPLL+ EI + + + P ++ + G + W + Sbjct: 109 IGNPDWAKAPKFVTLDAAHFDVAILPLLAHEIVIPSIDVVNPTVDLERLADGRNTWTFQF 168 Query: 129 STMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186 V L+ G + D + ++ L +++ S+ Sbjct: 169 RHGAQPSRWKVRLDSFGFAKGTVTYRDAITKADLTIAIDTLGQPIPLGDVLKEQERKSLA 228 Query: 187 GSVIAEGT 194 S G Sbjct: 229 ASTERVGK 236 >gi|257095464|ref|YP_003169105.1| hypothetical protein CAP2UW1_3926 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047988|gb|ACV37176.1| protein of unknown function DUF748 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 1109 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 114/355 (32%), Gaps = 40/355 (11%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ LG + V+++GA + + + + ++ + + V+ I I P+ Sbjct: 1 MQTRKYALGAMLVVLVIGALG--FLVLPPLVKTMLVDKLSEVLHRPVTVQ---SISINPY 55 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 SV + I +K G + + L + E G + ++ + P + G Sbjct: 56 TLSVQVAGLAIQEKGGGETVAGFDSLYVNVESSSFFRGGPVISELRLVGPVFRIVRLTDG 115 Query: 121 VSNWF-------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 N+ R ++ D + I + GG+I++ D+ + + +SD+N+ + Sbjct: 116 RLNFSDLIDEFIARPASDDPTPAFSVNNIQISGGKIELDDRALAEKHLISDVNIALP--- 172 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 + + V + + D + + A + L + L + ID Sbjct: 173 ---FISSLPTATEIFVEPAFSASIDGSPLVVQGKSKPFATSLESELALDLRDVQLAKYID 229 Query: 234 -----LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 L + F G L L S + + + R Sbjct: 230 YSPVRLPVQVVSGALDSDLKLHFQRHGSGHSALALSGSFVIRDVDVKDSAGAPLLSLKRL 289 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH------DLNETDFFEEE 337 ++ + + K + + + + +N +FF +E Sbjct: 290 EVLAGTLD---PLGGKYAID-------RVTVDSPDIHARVSRQGAINWIEFFSQE 334 Score = 51.8 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 35/325 (10%), Positives = 87/325 (26%), Gaps = 34/325 (10%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 S +D+ + ++ L + A L L G+ + + +D P ++ +S +G Sbjct: 267 SFVIRDVDVKDSAGA-PLLSLKRLEVLAGTLDPLGGKYAIDRVTVDSPDIHARVSRQGAI 325 Query: 123 NW------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS------D 164 NW + L + + GG ++ +D+ Q + + D Sbjct: 326 NWIEFFSQELAARSASVPEAKAVPVEWSLGEARITGGAVRWLDESQVQPFNANLDGLEFD 385 Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 L S ++ G + + + + +S L Sbjct: 386 LKNLDSRGTSRAQFNVAWRLEAGEWLKSAAVSIKGGLLDLAKR-DVLIEQFTLSGTRALI 444 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYS----------GVFSVAGDFSKLLNLELSAKKSRLSG 274 A I+ F + + + +S + Sbjct: 445 RRAANGRIEFFPTPQLKVVAASQKDPAGPWKVKVVKYRGEDLGVRFEDAAVSPAATHTLA 504 Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS-QDEENLLNFSENGAESMHDLNETDF 333 + N+ ++ + + VS + L +L Sbjct: 505 GMNLEAENLSTEPGNTATLAIRGKLNRKGEVAVSGTAKILPLAMDLKVDARTLELLPL-- 562 Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKK 358 + + N ++ + + S + + Sbjct: 563 -QPYFTERLNIEVTRGQVTMSGDVQ 586 >gi|90425426|ref|YP_533796.1| AsmA [Rhodopseudomonas palustris BisB18] gi|90107440|gb|ABD89477.1| AsmA [Rhodopseudomonas palustris BisB18] Length = 649 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 109/340 (32%), Gaps = 31/340 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LRR+ + + L + + +D R+ E Q + G ++AV G I + + P Sbjct: 9 LRRLGMSVAALLGLAAIALLATSGLLDREALRDAVEAQIRAVSGLELAVNGTIDVSVFPA 68 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 V F D+ + + L+ LPLL + D+ + +PH+ ++ G Sbjct: 69 SHVSFHDVDLKTPNTDGPALRAAVLTANLRLLPLLLRRFEIADLVLSRPHIRVIRAADGS 128 Query: 122 SNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 SNW + + + +I ++ G I +D+ + + ++L Sbjct: 129 SNWTPFVETLTQTMQPGADNQMSFSEIRIEDGEINYLDEANHLSETIGKIDL-------- 180 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPIIIDL 234 L+ SI + A G ++ +R I+ N + ++ P+ + Sbjct: 181 ---SLAWPSISRTFAATGQFDWRGERIDGSISVNDFLAALSGERSGLKARIAGAPMKLAF 237 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSK--------LLNLELSAKKSRLSGNFKISDGNVRIS 286 G + N + G S G + L + ++ ++ Sbjct: 238 DGAIA-NRASLMLEGTLSADGVSLRNALRWVGQEPPGGGGFGPFALRARASVVGPSMAMT 296 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 ++ + + L + Sbjct: 297 NVNIEL----DKNVAEGVITYVNNGRPSLQATLAAGALDF 332 >gi|330870713|gb|EGH05422.1| AsmA family protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 243 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 23/193 (11%), Positives = 62/193 (32%), Gaps = 25/193 (12%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KE 75 + F + D D++++ + A ++ + G I + P+ + D + Sbjct: 12 VALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWSLFPWLGLELHDAHVATLTA 71 Query: 76 DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--------- 126 + ++ L + LPLL ++++ D+ ++ +L + G NW Sbjct: 72 PDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLALHRDENGHGNWEDIGKPAVATT 131 Query: 127 ---------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 + + ++ + V R+ D + + + L Sbjct: 132 AAPGEPTPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYSDARKGRTFTAESIQLSTGP 191 Query: 172 RFLNIISPLSIDS 184 P+ + + Sbjct: 192 IREASDIPIKLTA 204 >gi|254473244|ref|ZP_05086642.1| AsmA family protein [Pseudovibrio sp. JE062] gi|211957965|gb|EEA93167.1| AsmA family protein [Pseudovibrio sp. JE062] Length = 995 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 100/313 (31%), Gaps = 25/313 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R L+ G L ++V+ G PL + + G K+ + G + +LP Sbjct: 1 MKRSLLIFGALAALVVCGLVLAPLLVPQKQLKAQIAETFETATGWKLRLDGRTSVDLLPT 60 Query: 62 PSVFFKDIRIDQ--KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 ++ +++ + + DG +++E L LL+G + ++ + +P K Sbjct: 61 LAIEIENVGVAGVARADGIEFARVEKARFELNSLRLLTGGNIIRNIELVEPTWTLEFDQK 120 Query: 120 GVSNWFQRKSTMDMIH-----------------NVILEKIHVKGGRIKIIDQESDQVYFL 162 G ++W + + + L+ + ++ G + + + Sbjct: 121 GGASWQPQLANAKEGEASLVAANIAGRVASFMQQLDLDTVGIQRGVVSYSEPDQAAPLVF 180 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 SD++L ++ ++G G + + + A + + + Sbjct: 181 SDIDLTLNFESGGDALTAEGAFVQGDEQYAVGGRVGSVTALSEARATSVEAHLVGPAQEK 240 Query: 223 LF-PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281 + G L + + P + V + + L + Sbjct: 241 IGFNGQLAFGARPVGTLQVSVELPDLAAVAAQHEAKLPEA-----VGSAALMTELQFRQR 295 Query: 282 NVRISRYKLQSIL 294 VR + + Sbjct: 296 GVRTKDLSITAGS 308 >gi|295135567|ref|YP_003586243.1| asmA family protein [Zunongwangia profunda SM-A87] gi|294983582|gb|ADF54047.1| asmA family protein [Zunongwangia profunda SM-A87] Length = 899 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 50/394 (12%), Positives = 117/394 (29%), Gaps = 49/394 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI 58 +++V +G V++V P E + + K I + + Sbjct: 1 MKKVFKIIGITLLVIIVLLIAAPFLFS-----SQIENFVKKTINNNVNAKVEFADIDLSL 55 Query: 59 ---LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSG---EIRVFDMYIDQP 110 P +V D+ + G + ++ ++++ L G R+ ++ Sbjct: 56 FRSFPQATVVLSDVSVINNAPFEGDTLADVKEVTLQMSIKELFKGSEEPKRIDQFKVNDA 115 Query: 111 HLNFYLSSKGVSNWFQRK-----------STMDMIHNVILEKIHVKGGRIKIIDQESDQV 159 ++N + S G +N+ K + ++ L+ + R+ D + Sbjct: 116 YINILVDSLGRANYDIAKIDTTATTTGTPADTTGGFSLDLQHYEINNSRLHYKDVGAKMA 175 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218 L +LN Q + F + L D+ S + + + +N + Sbjct: 176 LKLEELNHQGTGDFSLDQTELDTDTEAIVSFEFDSINYLNKNKVDLDAVIQMDLENMKYT 235 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS------AKKSRL 272 ++ + + G + + F K + + Sbjct: 236 F-LENEAHINQLPLTFNGFVQVDGDDTNIDLTFKTPSSDFKNFLAVIPEVYAKNIENVET 294 Query: 273 SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE--NLLNFSENGAESMHD--- 327 G+F + + N KV+ + + ++ + D Sbjct: 295 KGDFVVDG---------MIKGTANDKYIPKLDIKVTSNNASFKYPDLPKSVQDINLDLRV 345 Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361 LNET E+ KN + D +++ N + Sbjct: 346 LNETGIVEDTYLTFKNVKFRIDQDRFAANGSVKN 379 >gi|253995403|ref|YP_003047467.1| AsmA family protein [Methylotenera mobilis JLW8] gi|253982082|gb|ACT46940.1| AsmA family protein [Methylotenera mobilis JLW8] Length = 900 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 57/370 (15%), Positives = 102/370 (27%), Gaps = 37/370 (10%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEG 85 + D++ + + + ++G IK+ P + I + + I+G Sbjct: 29 TFNPNDYKPLIIKLVQEKKQRTLHLEGDIKLAFWPKIGADLGKLSISEHNSEQTFASIQG 88 Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH---NVILEKI 142 + LPLL E+ V +YID N G +N+ S + ++ + Sbjct: 89 AKVALALLPLLKKELVVDTIYIDGAQANIIKYKDGTTNFDDLLSKDEEESEQIKFDVDGV 148 Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID--------SIKGSVIAEGT 194 V + D+ + Y LS NL L L+ D ++ V +G Sbjct: 149 KVTNSAVTYSDEGTGAKYALSKFNLSAGHVALAQPFDLATDFSATANQPAVAVDVKLKGN 208 Query: 195 GNFDNKRSAFKITANFPAKNKAI----------SLKIQLFPLAYPIIID-LFGNLFWNEK 243 D + F + S + P +ID L L Sbjct: 209 FLADPEAKHFAAKGLDATIKGDVAGGKDVTVSMSGDVDAKPETREFLIDSLKLALTGQFD 268 Query: 244 QPIYSGVFSV--------------AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 + + S K + + + K S ++ S Sbjct: 269 GAKVALDLNAPALVAQKDEVTSKKISVSLSQEKASDSFKANLVLADIKGSPKALQSSGIS 328 Query: 290 LQSILPNSSTDEDNKTKVSQ-DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 + K L F D+ + K N + L Sbjct: 329 GDISGTQGKRSINGKFSSPFQGNLESLIFDLPKFAGNIDIKDPAIPNGSAKVNFDLSLHA 388 Query: 349 DDIQYSVNKK 358 D Q V+ K Sbjct: 389 DAEQEQVHSK 398 >gi|83858631|ref|ZP_00952153.1| putative AsmA protein [Oceanicaulis alexandrii HTCC2633] gi|83853454|gb|EAP91306.1| putative AsmA protein [Oceanicaulis alexandrii HTCC2633] Length = 675 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 115/351 (32%), Gaps = 38/351 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+LI L L +V+ A P + RE E A +G+++ + G I++ +LP Sbjct: 1 MRRLLIALLVLVILVIGVAVLAPALVPTDLIRERTETAAQEALGREVTLAGDIRLQVLPQ 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V D RI E ++++ + + +PLL +I + + + P + +++ Sbjct: 61 LQVRANDARIANAEGFGEEPFAEMQEMRVAVALIPLLQRQIEIEEFVLVDPVIRLQSNAR 120 Query: 120 GVSNWF---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 G + F ++ + + ++ G + D + + + Sbjct: 121 GNNWTFGDNTEAVAQATPEEGFQRQPGALPFEASFGDVRIENGAVTFDDGVQTRRFDALN 180 Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEG-----TGNFDNKRSAFKITANFPAKNKAISL 219 L++ + + + S ++ + G F+ + + F T N P + + Sbjct: 181 LSIDLPSVDQPVRLRGSFEADGRPMNFNAELGSLRGFFEGRETPFSTTLNGPLADLTLEG 240 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 + L D+ L F + + + L ++ Sbjct: 241 RF-LESTELAFDGDMDVTLPLRALARYLGADLPDGDIFRQFSARSAVSGEPGL---LRLR 296 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330 + + Q ++ + + +M DL Sbjct: 297 EARISFDDIDAQ-----------GAMTLNYGGARP-RITGELSTAMLDLTP 335 >gi|254427527|ref|ZP_05041234.1| AsmA family [Alcanivorax sp. DG881] gi|196193696|gb|EDX88655.1| AsmA family [Alcanivorax sp. DG881] Length = 736 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 112/359 (31%), Gaps = 28/359 (7%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +L+ +LI L + ++ + F + ID +F+ + E+QA + ++G + P Sbjct: 4 LLKILLITLFAIIVLLAIAVFVITQVIDPNEFKPEIEKQAQEQANLTLDIQGDLAWQFWP 63 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 V +D + ++ S+ LPLL G++ + + + ++N G Sbjct: 64 SLGVSLGRTEARIADDEELFAALDEASVSVAVLPLLYGQVEMDGITLAGLNVNLVDGPDG 123 Query: 121 VSNWFQRKSTMDMIH------------------NVILEKIHVKGGRIKIIDQESDQVYFL 162 + T + + K+ V G+++ + Sbjct: 124 ANWEQIGPQTPAEDTAAEEEPAAEDEGSSSLDIPLTIPKVVVSDGKVRYRSTADGTDIVV 183 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 NL L+ PL + S++ ++ + + N ++L Sbjct: 184 EHFNLNAQDVNLDEPFPLQM-SLRYQDQSDMRVDMNLDTVLAADIDNNHFVLNPMTLDAN 242 Query: 223 -LFPLAYPIIIDLFGNL--FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 P+ + L NL NE + A N+++SA + + K++ Sbjct: 243 IAGATTMPVDVHLEQNLDVNLNEDTVSIKDLLLQAAGTETKGNVDISALTGDMQLSGKLA 302 Query: 280 DGNVRISRYKLQSILP-----NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 ++ +S + E + + D + Sbjct: 303 TAPFDANKVLEAIGEAPIETTDSQALSKIALDATLGGEPG-SVMASPLTLTLDDSTLSG 360 >gi|170726960|ref|YP_001760986.1| AsmA family protein [Shewanella woodyi ATCC 51908] gi|169812307|gb|ACA86891.1| AsmA family protein [Shewanella woodyi ATCC 51908] Length = 606 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 41/333 (12%), Positives = 107/333 (32%), Gaps = 23/333 (6%) Query: 4 RVLIGLGFLFSVVLVGAFT-VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 ++L +F ++ + L D DF+ + G+ + ++ + P Sbjct: 2 KILKWFFIVFLLLFTSLIAYLTLIFDPNDFKPELVDAVKEKTGRDLVIENDLSWTFFPSI 61 Query: 63 SVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + I + K+ + +PL S E+ + + +D +N G Sbjct: 62 GIELSQISLSNPTGFDAASMLKVNNVVAEVALMPLFSKEVEIAQLNLDGLTVNLETRKDG 121 Query: 121 VSNWF--------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 +++ K+ + ++ + I + I + D + + Sbjct: 122 QTSFDGLDGGASQTKAADTDTKAGGAQLASLDIGGIAITNTTITMTDAIAGTEQVFTMDK 181 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 L + L +PL+ + + + T + + + K + ++ + Sbjct: 182 LTLGEFSLGKFAPLAYELTAE--LPDMTLTSQGEGMIKIAPSMQAVELKDLKIESSVIGE 239 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK-KSRLSGNFKISDGNVRI 285 P L L + + + V+ D + +++ S + K G + + Sbjct: 240 GIPNQ-KLDTQLLAQIQLLLDKKLLEVSLDELAVADIKGSGEVKVAYGSKVPNIHGQLDL 298 Query: 286 SRYKLQSILPNSSTD--EDNKTKVSQDEENLLN 316 L + +P + N + S ++E L+ Sbjct: 299 GDINLDTFMPADKATEEKSNSPQASSNKEPDLS 331 >gi|325523839|gb|EGD02072.1| AsmA family protein [Burkholderia sp. TJI49] Length = 771 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 36/337 (10%), Positives = 100/337 (29%), Gaps = 42/337 (12%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIR 70 DW R + + + +G+ A+ G + + +P+P+ ++I Sbjct: 28 FIFTFDWNRARPMVDDKVSAAIGRPFAINGDLTVRWHRATGETGWRAWVPWPTFAARNIT 87 Query: 71 IDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128 I + + + ++ + + + LPLL+ +I + + + P ++ + G +NW + Sbjct: 88 IANPDWAKQRYFATLDQIDFQVKLLPLLTHDIVIPTINLVSPSVDLERLADGRNNWTFKF 147 Query: 129 STMDMI--HNVILEKIHVKGGRIKIIDQESDQV---------YFLSDLNLQISARFLNII 177 + + L I + G I + DQ+ V + + + Sbjct: 148 KSSAHPLAWKLDLHDIRLDKGDIALSDQQKGLVMQATVNTLGHAIPIGEVLKQQESKARS 207 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 + +G+ ++ A + A + Sbjct: 208 ASAETVGKQGAQQLSRQARAAASAASAASAAPASTASGGQPAASGTTASAAQQKSEPQYG 267 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI------------SDGNVRI 285 + W S +G +L L+ +++ + + + ++ Sbjct: 268 IGWTVTGSYRHSALSGSGKLGGVLALQDASRPVPVQADVRAGDLHVALVGTVTDPAHLAA 327 Query: 286 SRYK--LQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320 + LQ + ++ + + Sbjct: 328 VDLRLWLQGSSLDRLYQLTG---ITLPQTPPYATEGH 361 >gi|146300930|ref|YP_001195521.1| AsmA family protein [Flavobacterium johnsoniae UW101] gi|146155348|gb|ABQ06202.1| AsmA family protein [Flavobacterium johnsoniae UW101] Length = 1090 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 69/427 (16%), Positives = 141/427 (33%), Gaps = 52/427 (12%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVP---LFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 M+++ L +F+ + + V +I + + E A + ++ I + Sbjct: 1 MIKKFLKKAAIVFAALFLLLILVLTIVPYIFKDEITDKIESIANENLNAEVRFD-EIGLS 59 Query: 58 IL---PFPSVFFKDIRIDQKE---DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111 + P V+ K++ I K+ S K E ++ F LL G+I + +Y+D Sbjct: 60 VFKHFPALIVYAKNVNIVNKKVQFTSSNIVKAETAAVGVNFYSLLKGKIILDAVYLDDAD 119 Query: 112 LNFYLSSKGVSNWF---QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 LN + KG +N+ KS+ ++K+ V I D+ + + + DLN + Sbjct: 120 LNLEIDPKGNANFNIIKPSKSSDTTQTEFKIKKVVVNKTNISYNDKSALLKFKVQDLNYK 179 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 + I L+ + + G + KA+ K + + Sbjct: 180 GTGDLSADIFDLNSNVKIKTFDFSLNGVDYVRSKPINAEIVTYIDAKALKFKFERNVIRI 239 Query: 229 P-IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL--------------------------- 260 G+ + + + + Sbjct: 240 KNFPFSFNGHFAFIKGGYDFDLRMQSKNSTLEEMLSLVPPAYDQWREQMTITGNIDFRIF 299 Query: 261 ---LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317 ++ ++K +S + +I++G + + K P + K +V + N L F Sbjct: 300 ARGKYMQDQSEKPVVSADLQINNGTIAYKKIK----EPLKDINISAKAQVRDLDINKLKF 355 Query: 318 SENGAESMHDLNET--DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN--QENF 373 + D +T F E KK K K D+ + K+ N +D + Sbjct: 356 DLDNLSFNLDKKKTTASFHSEGFKKLKIKTAVKADLDAAKFKEALNLNQNDIRGNIALDL 415 Query: 374 SGDKMIL 380 D + L Sbjct: 416 KADGIFL 422 >gi|163796885|ref|ZP_02190842.1| hypothetical protein BAL199_29585 [alpha proteobacterium BAL199] gi|159177874|gb|EDP62423.1| hypothetical protein BAL199_29585 [alpha proteobacterium BAL199] Length = 616 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 90/278 (32%), Gaps = 27/278 (9%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--E 80 +D ++++ G+ + + G + + LP PS+ +RI E G+ Sbjct: 24 FVATLDLNAYKDEVRAVLEDATGRHVEIAGPLDVSWLPLPSLTASGVRIANAEWGTDPAM 83 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----FQRKSTMDMIHN 136 I L++ + PLLSG++ V + + + G NW S Sbjct: 84 VTIGRLAVDVDVAPLLSGDLVVRGLTLADVQVRLERGPDGQPNWIVEGSPAGSASGRPAM 143 Query: 137 VILEKIHVKGGRIKIID--QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 + ++ + + D + ++V+ + L L + L D + GT Sbjct: 144 PDIRQLDLTDVTVIWRDGPKAPERVHHIKRLTLDGKGPNAPLTMTLLADLDGEVLELTGT 203 Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL------FGNLFW--NEKQPI 246 P + + ++ A ++ L G L E Sbjct: 204 L-------PTLAEIGRPGADLPVDVEGTFAGSALALVAKLQSTRGPKGALSGVRAEGLSA 256 Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 G +V G ++LS + R+ + ++ Sbjct: 257 TLGELAVTG----TAAVDLSKARPRIEARLEAKTVDLA 290 >gi|296114940|ref|ZP_06833586.1| AsmA family protein [Gluconacetobacter hansenii ATCC 23769] gi|295978498|gb|EFG85230.1| AsmA family protein [Gluconacetobacter hansenii ATCC 23769] Length = 827 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 39/324 (12%), Positives = 97/324 (29%), Gaps = 41/324 (12%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 + R +L+ + V GA + +D R G+++ + G +++H+ P Sbjct: 7 LRRGLLVSAAAIIVVAGGGALALRGILDPQALRARAIAAIERQTGREVTL-GAMEVHVFP 65 Query: 61 FPSVFFKDIRIDQ--KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 ++ DI + DG+ + + LL I++ ++ +D P L+ + Sbjct: 66 A-AISVHDIALADMKGGDGTPMFSARAMDASVGLMALLYHRIQLDNITLDHPVLHLRRDA 124 Query: 119 KGVSNWFQRKSTMD-----------------MIHNVILEKIHVKGGRIKIIDQESDQVYF 161 G +NW + +V L + V + D+ S Sbjct: 125 DGQANWRMTPNRAQAADATPAPVRPVAPAAGNPWSVQLGSLRVSDATVGWDDRLSGMKTQ 184 Query: 162 LSDLNLQISARFL-NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 L+ ++++ ++ + G I+ ++ + Sbjct: 185 LALGHVRVDGLNGARPTFDVAGTRDGAAFTLSGH--------TGAISLTHVGQDAKWPVH 236 Query: 221 IQL---FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 +L + + G + ++ Y L + G + Sbjct: 237 FELAFADHQQPAGHLTVDGTVADPDRARGYDLKLDGTLSRLVDLAPWV--------GGYD 288 Query: 278 ISDGNVRISRYKLQSILPNSSTDE 301 + D ++ + T+ Sbjct: 289 LPDARDVALSLRIVDGSTPADTNI 312 >gi|152994788|ref|YP_001339623.1| AsmA family protein [Marinomonas sp. MWYL1] gi|150835712|gb|ABR69688.1| AsmA family protein [Marinomonas sp. MWYL1] Length = 745 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 53/430 (12%), Positives = 134/430 (31%), Gaps = 79/430 (18%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R+ + L L +++ + + LF++ DF+++ + A + + G I P+ Sbjct: 4 IKRLSLFLAGLVAILAILLAYIMLFVNPNDFKDELKSVALEKANVNLRLDGDISWSFFPW 63 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + +DI + D + + LPLL +I+V + + + +++G Sbjct: 64 LGLGLEDIGVSIGSD-PEILQFDRAEFGLAILPLLKQKIQVDKVNLVNLKASLNKNAQGQ 122 Query: 122 SNWFQRKSTMDM---------------------------IHNVILEKIHVKGGRIKIIDQ 154 NW + ++ L+++ ++ +++ D+ Sbjct: 123 GNWQLDLPDSTPAASSSIPATTASTASSTSANDTVEKLKLPDIQLDELRIENAQVQYRDE 182 Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------------ 202 ++ Q+ + LN+Q++ + P+ +D +G K + Sbjct: 183 QTKQLINAT-LNVQLNDVQWDKAWPMVMDIAVTQSDLQGKSPIKAKATLNANLAVFPERE 241 Query: 203 ---------------------AFKITANFPAKNKAIS----LKIQLFPLAYPIIIDLFGN 237 + + + L L + +D Sbjct: 242 ALSLDSLVLSADVESELLPTSPISAKLSAANVDVDLPQENVLAEGLALSVLGVNVDAKIQ 301 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR------ISRYKLQ 291 + +P +S V +V + L L+ +S + ++ + Q Sbjct: 302 AYQVLSEPQFSAVLTVGEFNPRYLMTRLNLPLPEMSDDTAMTKARANVTLEGSLDSITAQ 361 Query: 292 SILPN-SSTDEDNKTKVSQDEENLLNFSENGAESMHDL-NETDFFEEEEKKNKNDDLKKD 349 I T+ + V + S G D T + ++ K + Sbjct: 362 PISITIDDTNIEANAVVDLSPL-RWDVSVAGKNLDLDRYLPTPVEKGKDGKVEAIT---- 416 Query: 350 DIQYSVNKKE 359 D+ + + Sbjct: 417 DVDIAAKTES 426 >gi|167584878|ref|ZP_02377266.1| hypothetical protein BuboB_06056 [Burkholderia ubonensis Bu] Length = 377 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 100/291 (34%), Gaps = 28/291 (9%) Query: 3 RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 RR+ +G+ + L+G F P I R E+Q + +G+ ++ +I + P+ Sbjct: 26 RRIGVGVLIFLVLFGLLGFFAAPPLI-----RHIAEQQLSRQLGRPATIQ---RIALNPY 77 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 ++ I + ++ I L +R + L G V ++ +D P + Sbjct: 78 TLNLEAGGIHLGERGGQGDFIDIGKLVVRPSWTSLFRGAPIVNEVRVDAPRFHVVRYDAQ 137 Query: 121 VSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 N+ + + I + GRI D+ ++ + + + L I Sbjct: 138 RFNFTDLIEKFSTPSKPESKPTHFSVSNIQINDGRIDFDDRLLNEKHVVDNWTLGIP--- 194 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 V + D + + A+++ + ++ L P +I Sbjct: 195 ---YIATLPSKTDIFVQPKLRLRLDGSPISIEGRTKPFAQSRESEIALKFDKLDVPQLIS 251 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + SG+ S + + + + R+SG ++D V Sbjct: 252 ---YVPAKLPVAVTSGLLS-SNLKLNFV-MSGATPALRVSGTVDLNDAKVT 297 >gi|323698039|ref|ZP_08109951.1| AsmA family protein [Desulfovibrio sp. ND132] gi|323457971|gb|EGB13836.1| AsmA family protein [Desulfovibrio desulfuricans ND132] Length = 1050 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 48/380 (12%), Positives = 109/380 (28%), Gaps = 54/380 (14%) Query: 1 MLRRVLIGLGFLFSVVLVG----AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 MLRR+ L +++ +ID +FR F ++G+ + +KG + I Sbjct: 1 MLRRLPRILVECLVALVLVCTGLLLWASYYIDTGEFRARFTETMETVLGRSVTLKGDLDI 60 Query: 57 HILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 I P ++ +D+ I + + + + LPLLS + V + + Sbjct: 61 AIWPRLALTVEDLGIGEAPGFGDGPAAHFNDIEISVRILPLLSHHVEVEFLELKGLKGVV 120 Query: 115 YLSSKGVSNWFQR--------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 + +GV NW + + + + + D+ + Y LS ++ Sbjct: 121 VRNGQGVFNWQSLVERGGQGGEGATMDGWTFAVNSVEITDAELLFRDEMAATEYKLSGID 180 Query: 167 LQISARFLNIISPLSID--------SIKGSVIAEGTGNF--------------------- 197 + L P S+ IK ++ +G Sbjct: 181 IHTGNVTLGEDVPFSLSSGFSWADQGIKADLVLKGMIRVMDDGTPPVFSRTTVQAKVYGD 240 Query: 198 ----DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253 F + + ++ + + + + + +K + G +V Sbjct: 241 FLPKKAAPGEFIAAVDLDWDKRIVTFE-DIRASLFGLRAEGDVTSGDLDKGLDFRGHITV 299 Query: 254 AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS------STDEDNKTKV 307 + L + + S + ++ + Sbjct: 300 HPFVPRDLIALYAPDMPVKDVDGLRSSAVASFVHVTEEGARFDNLILTLDDITVRGRCAF 359 Query: 308 SQDEENLLNFSENGAESMHD 327 + +L+F G D Sbjct: 360 TGWTRPVLDFDLRGNTLDLD 379 >gi|90409140|ref|ZP_01217259.1| asmA protein [Psychromonas sp. CNPT3] gi|90309748|gb|EAS37914.1| asmA protein [Psychromonas sp. CNPT3] Length = 642 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 121/348 (34%), Gaps = 39/348 (11%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ +L ++L+ + + ++ D++E + QA + +++ + G + + P Sbjct: 1 MKLLLKIFISFIVLILLAMLALVMLVNPNDYKEQIQTQAKQSLNRELLINGDLSWTLFPQ 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + +I + + KIE S+ + LPLL G++++ ++ ++ LN + Sbjct: 61 LGLSSGEIEVRNLDGFNRENFLKIESASLGIKILPLLKGQLKIAELNLEGFRLNIITNKY 120 Query: 120 GVSNWF--------------------------QRKSTMDMIHNVILEKIHVKGGRIKIID 153 G SN K I ++L+ I++ ++I D Sbjct: 121 GQSNLDNLGPQNSIEEQPESNTKQSTEVVTNNDNKEAFFDISQLVLDGININNTVLEIQD 180 Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213 +++ + + I + S DS + + ++ K+T+ Sbjct: 181 LKANSYHKV------IINKMHLGQFEFSKDSD---FVLISELLVNGTKANIKLTSVINVS 231 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS 273 + + L N N + V+ V L + + L+ Sbjct: 232 ADLTQINLNNLVLESQFSGKDIPNGAVNSTLKT-NVVYQVKSKKLTLEQFQFAVDDITLN 290 Query: 274 GNFKISDGNVRISRYKLQSILPN-SSTDEDNKTKVSQDEENLLNFSEN 320 G + G++ RY L + + N T ++ +N ++ Sbjct: 291 GKISLQSGDITKVRYSLVGNQWDLNPYLPKNSTTTDKNIKNDSKVTKK 338 >gi|319637767|ref|ZP_07992533.1| AsmA family protein [Neisseria mucosa C102] gi|317400922|gb|EFV81577.1| AsmA family protein [Neisseria mucosa C102] Length = 697 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 53/385 (13%), Positives = 126/385 (32%), Gaps = 31/385 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ ++ G+ L + V + + + + ++ + G +I I LP Sbjct: 9 LKTLVFGITALLCLAAVLSALMFRIFNTENIDAFIQKNFSAH-GCQIKYNATIGRKWLPR 67 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P++ KD+ + E + I M + L S + + P L Sbjct: 68 PTLILKDLSLSSSEPDTPTLNIAESKMGFGWSSLWSDAPIIEKWILLNPTLTLD---SKH 124 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII-SPL 180 + + L +I + G I+ +E + +LQ + Sbjct: 125 HLPACLQQDPSSKESFQLNRIIINNGSIRYHTKEQNIALNNLQFSLQQADSDGRPFDISG 184 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 ++ +I + +G G + + + A + L +Q L + + G+L W Sbjct: 185 TLQNIGNPISWQGAGYLVPNNAGWSVPA--------LKLNLQTVLLKNKLDAQIAGSLNW 236 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 + + F++ S NL ++A+ L + +G + ++ + + Sbjct: 237 QNQTALLR-DFNLQ-AESDFQNLHINARSPLL----QFKNGYLHLNTLNGALTAGSENNQ 290 Query: 301 EDNKTKVSQDEENLLNFSE-----------NGAESMHDLNETDFFEEEEKKNKNDDLKKD 349 D K+ + + + ++ + +++ + + L Sbjct: 291 WDGSFKLDKANLYATVLTAANFELKGSHKNDRLQTNFTFSSPLVWQKGKGIDA-PKLHLS 349 Query: 350 DIQYSVNKKEEKDNSHDKENQENFS 374 +Q ++N+ E Q NFS Sbjct: 350 TLQDTINRLPRPRFISTLEGQANFS 374 >gi|238783924|ref|ZP_04627941.1| hypothetical protein yberc0001_3200 [Yersinia bercovieri ATCC 43970] gi|238715163|gb|EEQ07158.1| hypothetical protein yberc0001_3200 [Yersinia bercovieri ATCC 43970] Length = 702 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 40/362 (11%), Positives = 102/362 (28%), Gaps = 62/362 (17%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRI 71 + DW + + + + + A++G + + +P+P++ +D+ + Sbjct: 26 IMTFDWNRLKPTINEKVSAELQRPFAIRGNLGVDWSRKSDEPGWRGWVPWPNIHAEDLVL 85 Query: 72 DQKE-----------------DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 ++ + L LL+ E+ + +++ QP N Sbjct: 86 GNPPELVSDKTADDKIAATAFPAGEMVTLKRVDASIAPLALLAKEVWIPRIWLTQPDANL 145 Query: 115 YLSSKGVSNW------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDL- 165 + G +NW ++ +V ++ I G I + D ++D + L Sbjct: 146 LRLANGKNNWTFNLANSPKEGEQPSSWSVNIDDIVFDRGAISLNDAMLKADLHAVIDPLG 205 Query: 166 ----NLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITANFPA--KN 214 +++ DS + + + G + + + Sbjct: 206 KPLPFAEVTGSSTEKKGQPPADSAQSNTADYVFGWKIDGKYQGQSLTGSGKMGGMLSMSD 265 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270 + +Q + + + G L +G L + Sbjct: 266 ASRPFPLQADLRSGSTRVAVAGTLTDPGNLAGLDLQLKFSGASLDNLYPLIGVLLPATPP 325 Query: 271 -----RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 RL + K +DG V R + + + + L + + + Sbjct: 326 YNTDGRLVASLKQADGAVYRYENFNGKIGDSDIHGNLTYTAS---QPRPKLTGNMSSEKL 382 Query: 325 MH 326 Sbjct: 383 RF 384 >gi|146299476|ref|YP_001194067.1| AsmA family protein [Flavobacterium johnsoniae UW101] gi|146153894|gb|ABQ04748.1| AsmA family protein [Flavobacterium johnsoniae UW101] Length = 867 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 54/386 (13%), Positives = 115/386 (29%), Gaps = 33/386 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58 ML+++L + V + F +P + V K++ + + Sbjct: 1 MLKKILKVTAIVLVVFVAALFAIPFLF-KDQIKAKIADAINESVDAKVSFA-DADLSLFK 58 Query: 59 -LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE---IRVFDMYIDQPHL 112 P +V + + I K G + L+++ L G+ + + + + + Sbjct: 59 NFPNAAVGIEKLVIINKAPFEGDTLVSLGELNLKMSIKELFKGKDEPLNIQGITSENGLI 118 Query: 113 NFYLSSKGVSNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 N + GV N+ +K ++ ++ ++ + IDQ S + Sbjct: 119 NIIFNKDGVGNFDIALKDKKEDDKKDDKSSPLSLKIQNYKIENFTFRYIDQGSKIKMVID 178 Query: 164 DLNLQISARFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 LN + + F N L + S+ + N + + K + Sbjct: 179 SLNHEGTGDFTNSKLDLDTKTTANVSLDMDKVNYMKNIKLTLDAILGIDLDQSKYTFK-E 237 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSG---NFKI 278 L + ++ G + ++ IY F F+ L L SA S L G + Sbjct: 238 NKALINQLPLEFDGFIQMVKEGQIYDLKFKTPTSSFTNFLGLIPSAYASSLDGVKTTGEF 297 Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD---LNETDFFE 335 + + ++ + N + + D +NET Sbjct: 298 TVVGFAKGKLTDTTVPAFNIAIASNNASFQYPNLPK-----SVQNIVIDTKIINETGILN 352 Query: 336 EEEKKNKNDDLKKDDIQYSVNKKEEK 361 + K D +S Sbjct: 353 DTYVNLDKLSFKIDQDVFSAKANVRN 378 >gi|152981940|ref|YP_001353591.1| hypothetical protein mma_1901 [Janthinobacterium sp. Marseille] gi|151282017|gb|ABR90427.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 639 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 59/374 (15%), Positives = 121/374 (32%), Gaps = 49/374 (13%) Query: 40 ATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLS 97 + + + G + + +LP+P + +D+RI + + + + R LPLL Sbjct: 43 LKQNWNRDLTIGG-LSLDLLPYPRLRARDVRISNPDWAQDKYLLQADDIRARLSLLPLLR 101 Query: 98 GEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD 157 G + V + + LN + G +W + L+ + G I ++ Sbjct: 102 GNVAVEGLLVKGLQLNLEEADDGRRSWEMPATRSLRTSQFDLQALRADGSTINYRTPGNE 161 Query: 158 -QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN----------FDNKRSAFKI 206 + + + L + + N+ + K ++ +G + K Sbjct: 162 IKSWQVESLQARGDSGLRNMAVSGRVLRDKYALQFDGKLDDLSALGTPHAVSQGTLTLKS 221 Query: 207 TANFPAKNKAISLKIQLFPLAYPIIID------LFGNLFWNEKQP---IYSGVFSVAGDF 257 + + L L + +++D L+G L + P S + Sbjct: 222 GEAQASVTGLLPLDSVLQDYDFALVVDAASMKELYGFLQIDRASPAALKASVTLQAKNNQ 281 Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRIS-------------RYKLQSILPNSSTDEDNK 304 S +L+L K LSG+ K + N R++ + L S ++ + Sbjct: 282 SLFKDLQLQLGKLNLSGDGKWARKNDRLNFDARLQADYIDMVQTFLDLGQAPLSPKKEGE 341 Query: 305 TKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364 + L + +G + D LK N K + Sbjct: 342 LFRDKPLAWPLLLAMDGVDGKLD-------------ATIATLKLRSGVEVANAKGTMSFT 388 Query: 365 HDKENQENFSGDKM 378 DK N ++FSG + Sbjct: 389 DDKLNVQHFSGSLL 402 >gi|222055406|ref|YP_002537768.1| AsmA family protein [Geobacter sp. FRC-32] gi|221564695|gb|ACM20667.1| AsmA family protein [Geobacter sp. FRC-32] Length = 1073 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 112/316 (35%), Gaps = 23/316 (7%) Query: 3 RRVLIGLGFLFSVVLVGA---FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59 + ++I FL ++VL G F + + ++E + ++ +++ + G+ Sbjct: 6 KYIIIVFSFLLAIVLAGGGLSFLLDKLLHLDTYKEQILAETQRMLKRQVTYEKGL-FAFK 64 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 PS F ++ + +K+ + E ++ + + LPLL + + ++ + P +N K Sbjct: 65 FGPSFTFTNVIVKEKDGSNDFVSAEKITFKVDLLPLLEKRVSLHEIILSHPKINLSRDDK 124 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE---SDQVYFLSDLNLQISARFLNI 176 GV N+ D +V L++I V G I D+ S L DL+L + Sbjct: 125 GVFNFDDLLEKTDSSVSVHLKEIKVDKGTINFDDRSVVPSGLTTRLKDLDLHLGNMTRGK 184 Query: 177 ISPLSIDSIKG-----SVIAEGTGNFDNKRSAFK-------ITANFPAKNKAISLKIQLF 224 + + + G + GT + K I + ++ + Sbjct: 185 KCRIKLAASIGGAAPNKLSVSGTVRIARRDRPLKESIADLHIKTDNFDVSQFWPYYMAHV 244 Query: 225 PLAYPI-IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---LSGNFKISD 280 P + D N+ + G V+ + + R +++D Sbjct: 245 PFKKVMGRFDTDLNVKGKFEAFTSKGEVRVSSLRFDYPQVFHAVLTPRNTHFRYAMELTD 304 Query: 281 GNVRISRYKLQSILPN 296 ++ + L N Sbjct: 305 RDIAVKSINLTVDKLN 320 >gi|295676495|ref|YP_003605019.1| AsmA family protein [Burkholderia sp. CCGE1002] gi|295436338|gb|ADG15508.1| AsmA family protein [Burkholderia sp. CCGE1002] Length = 836 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 58/156 (37%), Gaps = 16/156 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIR 70 L DW R + + + +G+ A+ G +K+ +P+P +I Sbjct: 32 FVLTFDWNRARPYIDDKVSQAIGRPFAINGDLKVGWRHAVGETGWRGWVPWPRFSAANIT 91 Query: 71 IDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ-- 126 I + + ++ + E LPLL+ +I + + + P ++ G +NW Sbjct: 92 IGNPDWAKQPQFATLDEIDFEVEVLPLLTHDIVIPAINLVNPSVDLERLVDGRNNWTFKL 151 Query: 127 RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 S+ + L I G I + DQ+ + Sbjct: 152 PSSSGPSEWKLDLHDIAFAKGNITLSDQQKKVEVQM 187 >gi|329912192|ref|ZP_08275710.1| AsmA [Oxalobacteraceae bacterium IMCC9480] gi|327545673|gb|EGF30823.1| AsmA [Oxalobacteraceae bacterium IMCC9480] Length = 650 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 95/334 (28%), Gaps = 30/334 (8%) Query: 4 RVLIGLGFLFSVVLV-GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R L +++ A L D + E++AT G+ + + G + +H+LP P Sbjct: 12 RFACISAVLVVLLVAGAALASRLLFDQPRWINWLEQRATADAGRPVHI-GALSVHLLPRP 70 Query: 63 SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + ++I D + +S R PLL G++R+ + HL +S G Sbjct: 71 GIDIYRLQIADPADAQAVPLVQAAQVSARLALWPLLVGQVRIAGLVAKGVHLELERNSDG 130 Query: 121 VSN--WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 V N W + L + + ++ + D I+ Sbjct: 131 VPNWRWPAAGQGAAPLDLGALTSVRISQSSVRYRSPQFDSGIT--------------QIT 176 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 LSI S G E R +A + S +I L + + + L Sbjct: 177 QLSILSEPGWRDIEVEALLRRDRRELVASARLDQLSVLPSGRITLQTGSARLSAEGRLPL 236 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAK-----KSRLSGNFKISDGNVRISRYKLQSI 293 L + L A L S G + S + Sbjct: 237 QAVLTNAAVKLQVDAHRPNDLLAFMNLDAGLRTIAPISLHAELHESGGTLTASAIDARLG 296 Query: 294 LPNSSTDEDNKTKVSQDEE-NLLNFSENGAESMH 326 ++ + + + Sbjct: 297 ----DLQVTGNARLDRGGSRPTFDAQLSTPLLDW 326 >gi|110678964|ref|YP_681971.1| AsmA family protein [Roseobacter denitrificans OCh 114] gi|109455080|gb|ABG31285.1| AsmA family protein [Roseobacter denitrificans OCh 114] Length = 650 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 41/330 (12%), Positives = 88/330 (26%), Gaps = 40/330 (12%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIEGLS 87 Q + G+ +A+ G + + P V D+ + + + Sbjct: 28 DRLARIATEQLSATTGRDVAINGDVALTFWPVLGVSANDLEVGNAAWAEQGPMLQAANAA 87 Query: 88 MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------------------FQRK 128 + + + LL G+IR+ ++ P + G ++W Sbjct: 88 IGVDVMALLRGDIRITNVEAHSPTIRLEQRLDGRASWEFTNAEDTAQITTSTDASTDAPA 147 Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188 + D + +E++ V + D E + L+ ++L + G Sbjct: 148 AMADESRTISIERLSVTNATLVY-DAEGSDLVTLAGVDLALDWPDPG-----------GP 195 Query: 189 VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP-IIIDLFGNLFWNEKQPIY 247 T + A + +A P + L G Sbjct: 196 AEISATVRPADVPVRIAAQIEGFGDFIAGETRGVNATVAVPSGELSLDGRAS-TAGAVAG 254 Query: 248 SGVFSVAG--DFSKLLNLELSAKKSRLSGNFKISDGNVRIS--RYKLQSILPN-SSTDED 302 + FS F L L A +L + + L+ ++ + Sbjct: 255 AVSFSAGNTEAFLAALGLPGIALPPKLGAQIDMRTDLTLTPDRQLALRDLVLDLHGNRLT 314 Query: 303 NKTKVSQDEENLLNFSENGAESMHDLNETD 332 VS + +N + +T Sbjct: 315 GAADVSLNGTPNVNVQLAAGDLDLRPVQTA 344 >gi|83593989|ref|YP_427741.1| AsmA [Rhodospirillum rubrum ATCC 11170] gi|83576903|gb|ABC23454.1| AsmA [Rhodospirillum rubrum ATCC 11170] Length = 737 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 37/361 (10%), Positives = 93/361 (25%), Gaps = 48/361 (13%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 +L + L V++V + D ++ + + G+++ + G I + + P+ Sbjct: 6 TILKVVFGLAVVLVVAVVVLVATFDLNAYKGRLAAELGRLTGREVTIAGDIGLALSLTPT 65 Query: 64 VFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + + + + ++ L + +PLLSG + + + +D P + ++ G Sbjct: 66 IAVEGVTLGNAAWAGSEPMVAVDRLEAKIAVVPLLSGIVSIDSLELDAPRILLATNAAGQ 125 Query: 122 SNWFQRKSTMD-----------------------------MIHNVILEKIHVKGGRIKII 152 NW + + + + + + Sbjct: 126 GNWALTPAAKPAAQTPPAASKSEPTPEPTPDPAAAQSTAAAPVSFDIRSVTITDALLTYK 185 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN-FP 211 D ++ L + + + G + Sbjct: 186 DGKAG----------GPPTTLTLKSLTLLSEGAGQPLDVDLQGALGARLLGLSGKLGAID 235 Query: 212 AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS- 270 + + L + + G++ K L A Sbjct: 236 TILAGQPMAVDLAFETDGLSGTVKGSVAEPLKGKGLDLAVVARAADLSDLAGNSVAALPL 295 Query: 271 RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330 LS R+ L+ ++ + L + A + DL E Sbjct: 296 DLSTRITQDGAAYRLGDLALRLGAS----SVSGALRIDPAAKP-LAVTGVLAAPLLDLAE 350 Query: 331 T 331 Sbjct: 351 L 351 >gi|317405492|gb|EFV85801.1| secreted protein [Achromobacter xylosoxidans C54] Length = 832 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 90/326 (27%), Gaps = 41/326 (12%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82 L D ++ E + + + G I++ + P + + + + + + Sbjct: 26 FLLTFDPNAYKYKLEELVQERYHRTLTIDGEIELSLFPRIGLSVQGVSLSEANSTETFAS 85 Query: 83 IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--------------- 127 IE + PLLS V + I G N+ Sbjct: 86 IESTRLAVAVWPLLSNSFVVDHVAISGFKARVVRDKDGQFNFSNLVGGTAPVVATPSNPA 145 Query: 128 ------------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 + + + +K G +++ DQ S ++ +N Sbjct: 146 EALAGAAQTAAQALTSGTLPPSRNNMQIDIAGLDLKDGEVQLQDQMSGMAVAVTKINANT 205 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-PLAY 228 N + + + N + + + + + L++ P A Sbjct: 206 GRVTFNQPFDVRLTARVEGGNPRMDANLNGQALLTLDPSAKRYAAQKLDLRMDGKLPGAQ 265 Query: 229 PIIIDLFGNLFWNEKQPIYS-------GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281 + + GNL +N ++ V + N+E S +LS + S Sbjct: 266 AKSLAVRGNLAFNGQKSALDVAGLEVVFQGDVTDPAAPATNVEASVAMPKLSIDPHKSQL 325 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKV 307 + + + + + + Sbjct: 326 QIEKLAVRAKGGVADGPFEFAVDAPA 351 >gi|258591922|emb|CBE68227.1| conserved exported protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 999 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 116/359 (32%), Gaps = 36/359 (10%) Query: 3 RRVLIGLGFLFS-VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R++LI G +F+ ++L F +P R R + + +++ ++ +I I PF Sbjct: 19 RKLLIWFGAVFAAMILFAFFGLPPL-----ARSFLIRTLSETLHREVTIQ---QIKINPF 70 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 S+ + + + +E + + L + + + + ++ +D+P++ G Sbjct: 71 ALSLTIRGVTVKDRETPETFASFDQLFINLQSFSAFRLALILKEVRLDRPYIRIVHHQDG 130 Query: 121 VSNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 N+ + L I + GG + +IDQ + + D N+ I Sbjct: 131 SYNFSDLLGAGSSDQGGNAAPPKFSLNNIQIVGGSVDLIDQPKQTSHTVRDANIAIPFLS 190 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 ++ SV + + + A + A ++ + I + L P + Sbjct: 191 NFPHY------LETSVEPRLSATINGSQYALEGKTKPFASSRQTTFDIDIADLDIPHYLA 244 Query: 234 ---LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 + N + S + L +E ++S + + L Sbjct: 245 YVPIEANFKIRSGKLTVKAQLSFVQHQRQTLTVEGRFALRQVSVSDAQGQPLLTFPLLDL 304 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349 S+ V+ + + E + + +N D D Sbjct: 305 ---SLASTEPLAGLFHVA-------SVTLESPELFIRRDPNGITNIQSLFPRNPDSSTD 353 >gi|323526070|ref|YP_004228223.1| AsmA family protein [Burkholderia sp. CCGE1001] gi|323383072|gb|ADX55163.1| AsmA family protein [Burkholderia sp. CCGE1001] Length = 840 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 83/265 (31%), Gaps = 24/265 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDI 69 L DW R + T +G++ + G +K+ +P+P +I Sbjct: 31 VFILTFDWNRARPYVNDKVTQAIGRQFTINGDLKVGFRHAVGETGWKSWVPWPRFSAANI 90 Query: 70 RIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ- 126 I + + ++ + + + LPLL+ +I + + + P ++ + G + W Sbjct: 91 TIANPDWAKRPQFATLDEIDFQVKVLPLLAHDIVIPAINLVNPSVDLERMADGRNTWTFQ 150 Query: 127 -RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 KS + L I G I + D++ ++ QI L P+ +++ Sbjct: 151 LPKSKKPSEWKLQLHDIVFAKGNIALSDEQKK-------VDAQIVVDTLGKPIPIG-EAM 202 Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 K A + + + A+ +A S A + Sbjct: 203 KQQEDASRKASAEAVGKEGAKKLSAQAEAQAASAASAASAAAASGASATDIHASGTTAAT 262 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKS 270 SG G A Sbjct: 263 GASGGLVAGGSKGASAAERAGASTP 287 >gi|260432907|ref|ZP_05786878.1| AsmA family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260416735|gb|EEX09994.1| AsmA family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 653 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 98/361 (27%), Gaps = 19/361 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + L L +V + + L + Q G+ + + G +++ P Sbjct: 1 MKWLTRILLILIAVAGLVIGAL-LLMPGDKLARILSEQVKAQTGRDLTLSGDVRLSFWPV 59 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + + L++ + LLSG+IRV + + P L + Sbjct: 60 LGMETGPVAFGNAKWAGPEPMLSAKSLAIGVDARALLSGDIRVKRVLAEDPVLRLERNG- 118 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 G NW + + + + + N F + Sbjct: 119 GRGNWELASLDANPSPAASARTSTARPSSVILEQLGLVNARLIYIENGVTQMDFSAVDLS 178 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKI---TANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 S + + + + + K + + + + D Sbjct: 179 ASWPEVTAPMRLKAAMPVPGGTVEVSLDIPDLPTFSVGKVTPMSMAMTAPGGEVRFDGRV 238 Query: 237 NLFWNEKQPIY----SGVFSVAGDFSKLLNLELSAKKSR-LSGNFKISDGNVRISRYKLQ 291 NL + S +A +N+ + +SG + RIS +Q Sbjct: 239 NLAGEMEGKTLVRTKSTETFLAAFGQGGVNVPTGLGRVADISGQMAYTRDG-RISLRDMQ 297 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 IL ++ + ++ + + + T F + Sbjct: 298 VILDHN--RFSGEADIAIGNPPQVTARLSAGDLDL----TQAFGGTSTTTPDASSTGSTP 351 Query: 352 Q 352 + Sbjct: 352 R 352 >gi|225075798|ref|ZP_03718997.1| hypothetical protein NEIFLAOT_00814 [Neisseria flavescens NRL30031/H210] gi|224952880|gb|EEG34089.1| hypothetical protein NEIFLAOT_00814 [Neisseria flavescens NRL30031/H210] Length = 697 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 53/389 (13%), Positives = 127/389 (32%), Gaps = 39/389 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ ++ + L + V + + + + ++ + G ++ I LP Sbjct: 9 LKTLVFSIAVLLCLAAVLSALMFRIFNTENIDAFIQKNFSAH-GCQVKYNANISRKWLPR 67 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P++ KD+ + E + I M + L S + + P L + Sbjct: 68 PTLILKDLNLSSSEPDTPTLNIAESKMGFGWSSLWSDAPILEKWILSNPSLTLGPKN--- 124 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + L +I + G I+ ++E Q L+DL + Sbjct: 125 HLPACLQQNQASKESFQLNRIIINSGSIRYHNKE--QDIALNDLQFSLR----------R 172 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK-----AISLKIQLFPLAYPIIIDLFG 236 +S GT +++ + + A+ L +Q L + + G Sbjct: 173 ANSDGRPFNISGTLQNIGSPISWQGAGHLVQDDAGWSVPALKLNLQTVLLKNKLDAQIAG 232 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 +L W + ++ F++ S NL ++A+ L + +G + ++ + Sbjct: 233 SLNWQNQTALFR-DFNLQ-AESDYQNLHINARSPLL----QFKNGYLHLNTLNGALTAGS 286 Query: 297 SSTDEDNKTKVSQDEENLLNFSE-----------NGAESMHDLNETDFFEEEEKKNKNDD 345 + D K+ + + + ++ + +++ + + Sbjct: 287 ENNQWDGSFKLDKTNLYATVLTAANFELKGSHKNDRLQTNFTFSSPLVWQKGKGIDA-PK 345 Query: 346 LKKDDIQYSVNKKEEKDNSHDKENQENFS 374 L +Q ++N+ E Q NFS Sbjct: 346 LHLSTLQDTINRLPRPRFISTLEGQANFS 374 >gi|307729613|ref|YP_003906837.1| AsmA family protein [Burkholderia sp. CCGE1003] gi|307584148|gb|ADN57546.1| AsmA family protein [Burkholderia sp. CCGE1003] Length = 857 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 16/189 (8%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDI 69 L DW R + T +G++ + G +++ +P+P +I Sbjct: 31 VFILTFDWNRARPYVNDKVTQAIGRQFTINGDLRVGLRHPVGETGWKSWVPWPRFSAANI 90 Query: 70 RIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ- 126 I + + ++ + + + LPLL+ +I + + + P ++ G +NW Sbjct: 91 TIANPDWAKRPQFATLDEIDFQVKVLPLLAHDIVIPAINLVNPSVDLERMMDGRNNWTFE 150 Query: 127 -RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 KS + L I G I + D++ + L + S Sbjct: 151 LPKSKTPSQWKLQLHDIVFTKGNIALSDEQKKVDAQMVVDTLGQPIPIGEALKQQEQASR 210 Query: 186 KGSVIAEGT 194 K S A G Sbjct: 211 KASAEAVGK 219 >gi|95929507|ref|ZP_01312250.1| AsmA [Desulfuromonas acetoxidans DSM 684] gi|95134623|gb|EAT16279.1| AsmA [Desulfuromonas acetoxidans DSM 684] Length = 798 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 100/349 (28%), Gaps = 36/349 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTV-PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 + L L VL G V + R+ + +K+ + G +++ + Sbjct: 7 KYLSVFALLSIFVLGGLVIVAHFLVTPERIRDAVVPVLEQKLQRKVHLAG-VEVSLFS-- 63 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 V + + D + + + MR + PLL + + ++ I++P LN + G Sbjct: 64 GVTLNHLAVVDSNDDTLLVSADKVVMRYQLWPLLLQRVVIDEVRIERPKLNVERRAGGQW 123 Query: 123 NWFQRKSTMDMIH---------------NVILEKIHVKGGRIKIIDQESDQVYFLS---- 163 N ++++ +++ G + D + Sbjct: 124 NLTFLPQPAPTPKVQTASLIPSAGETGIDLLVSDLYISQGEVIFKDYTFGTPAHIYKLSQ 183 Query: 164 -DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS---- 218 DL L + L V EG + ++ + Sbjct: 184 FDLRLGNVSFDRESSIVLWGKFNGSPVDIEGKFALGAQTFDLELVTDGLDLIPLQPYYRH 243 Query: 219 -LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL---ELSAKKSRLSG 274 L +L L + + G L + SG L NL L ++ Sbjct: 244 YLNGRLDGLVLDAELRVRGGLTAPVQ---VSGQLVTRDLDLVLNNLKSWPLQGRRIDFDV 300 Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 + + + R+ L + D++ +++ + Sbjct: 301 DLGLDAAHQRLDVAALNVDVNGIELQAQG-AVTGLDQQPVVDLKVTTPQ 348 >gi|319426191|gb|ADV54265.1| AsmA family protein [Shewanella putrefaciens 200] Length = 608 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 45/345 (13%), Positives = 117/345 (33%), Gaps = 24/345 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + L L ++ L+ + +F D DF+ + G+++ + + P Sbjct: 1 MKLIKWFLAILVTLALLVTLYLTVFFDPNDFKPEIVNAVKKQTGRELVIADDLSWTFFPA 60 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + I + E + + +PL EI+V + +D ++N Sbjct: 61 LGINLGGISLSNPEGFTPKSMLDVNKAVAEVALIPLFRKEIQVAQLSLDGANINLVTRKN 120 Query: 120 GVSNWFQRKSTMDM---------------IHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 G S+ T + +V + + + +I +ID+ + + Sbjct: 121 GSSSLDGLTGTDPSVKSSSTAAPASSPTQLASVEVGGVSITNTQINMIDETKGETQTFTL 180 Query: 165 LNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 +L + L+ +P++ + + ++G G R ++ + + Sbjct: 181 DSLTLGTFSLDKFAPIAYEFTATLSDMKITSKGEGELKLSRDFNQLVIEKLKIDTVVEGN 240 Query: 221 -IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 I L + ++ L + + + + + S L + K ++ +F++ Sbjct: 241 SIPNQKLTTALSVNTEIALDKKQLLADITQLNAADINASGKLTVNYGTKVPQIKADFQVG 300 Query: 280 DGNVR--ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA 322 D +V + + + + S + T+ L+ S A Sbjct: 301 DIDVDSLLPKSEATANGAPVSAGAEQATEPDLSALKSLDLSVKLA 345 >gi|163744052|ref|ZP_02151419.1| AsmA family protein [Phaeobacter gallaeciensis 2.10] gi|161382668|gb|EDQ07070.1| AsmA family protein [Phaeobacter gallaeciensis 2.10] Length = 650 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 84/312 (26%), Gaps = 24/312 (7%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIEGLS 87 + Q G+ + G + + P V + + E L+ Sbjct: 28 EKLAQLAAAQIEKQTGRTVTFGGRVGYTLWPTLGVKADRVALSNAPWAGPEPMLTAERLT 87 Query: 88 MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMD------------MIH 135 + L+ G++RV ++ P LN + G NW ++ Sbjct: 88 IGVAAADLIGGKVRVTELSAVLPQLNLSTRADGTGNWVLDPASDSETKAVPATPGSMDSL 147 Query: 136 NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195 V +E +++ G ++ + + ++L + I + Sbjct: 148 PVSIEALNLTGATLRYA-PHGETPIEMKQIDLALQWPDPTGTVVADITLRPAGDPVQIEA 206 Query: 196 NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255 F+ + ++ L + + G S+A Sbjct: 207 EIG----TFEAFLAGQVSSVGATVTAADTFLRFDGRANTAGAATGRMTGKSTDLARSLAV 262 Query: 256 DFSKLLNLELSAKKSRLSGNFKI-SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314 + + K L + +DG + + L++ + V+ + Sbjct: 263 LGAAQGIEVPAVKTWLLGSDLTYTTDGRLALRDLTLEA----DANKLRGAADVTLGDVPK 318 Query: 315 LNFSENGAESMH 326 + +G + Sbjct: 319 VTARLSGDQLDL 330 >gi|146292873|ref|YP_001183297.1| AsmA family protein [Shewanella putrefaciens CN-32] gi|145564563|gb|ABP75498.1| AsmA family protein [Shewanella putrefaciens CN-32] Length = 608 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 45/345 (13%), Positives = 117/345 (33%), Gaps = 24/345 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + L L ++ L+ + +F D DF+ + G+++ + + P Sbjct: 1 MKLIKWFLAILVTLALLVTLYLTVFFDPNDFKPEIVNAVKKQTGRELVIADDLSWTFFPA 60 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + I + E + + +PL EI+V + +D ++N Sbjct: 61 LGINLGGISLSNPEGFTPKSMLDVNKAVAEVALIPLFRKEIQVAQLSLDGANINLVTRKN 120 Query: 120 GVSNWFQRKSTMDM---------------IHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 G S+ T + +V + + + +I +ID+ + + Sbjct: 121 GSSSLDGLTGTDPSVKSSSTAAPASSPAQLASVEVGGVSITNTQINMIDETKGETQTFTL 180 Query: 165 LNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 +L + L+ +P++ + + ++G G R ++ + + Sbjct: 181 DSLTLGTFSLDKFAPIAYEFTATLSDMKITSQGEGELKLSRDFNQLVIEKLKIDTVVEGN 240 Query: 221 -IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 I L + ++ L + + + + + S L + K ++ +F++ Sbjct: 241 SIPNQKLTTALSVNTEIALDKKQLLADITQLNAADINASGKLTVNYGTKVPQIKADFQVG 300 Query: 280 DGNVR--ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA 322 D +V + + + + S + T+ L+ S A Sbjct: 301 DIDVDSLLPKSEATANGAPVSAGAEQATEPDLSALKSLDLSVKLA 345 >gi|313677214|ref|YP_004055210.1| asma family protein [Marivirga tractuosa DSM 4126] gi|312943912|gb|ADR23102.1| AsmA family protein [Marivirga tractuosa DSM 4126] Length = 880 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 57/388 (14%), Positives = 124/388 (31%), Gaps = 31/388 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK-GGIKIHI-- 58 ++++LI LG + ++ ++ VP+ + + + K+ + I I + Sbjct: 1 MKKLLIVLGSIIALFVLTIILVPVLF-KDRIVSTVQTEIDKSINAKVNFEPAKISISLLS 59 Query: 59 -LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIR-VFDMYIDQPHLNF 114 P ++ +D I KE G + S+ + + +L GE + + +D+P +N Sbjct: 60 NFPNLTLGVRDFSITGKETFEGDTLFAAKDFSVEMDIVAILKGEPLNIKGIMLDEPLINI 119 Query: 115 YLSSKGVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 + G +N+ ++ + ++ +K GRI DQ D L Sbjct: 120 LVLKDGSANYDITYPSDEQEPVEDTSSEDEFKFGIDHWEIKNGRINYYDQMYDMAISLLG 179 Query: 165 LNLQISARFLNIISPLSIDSIKGSVIA--EGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 ++ + F + + + +G +K + N + K Sbjct: 180 VDHTGNGDFTLSVFDMQTKTTAEDFSFAYDGDVYVAHKTLKADLFLGMDMDNMKFTFK-D 238 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG------DFSKLLNLELSAKKSRLSGNF 276 ++ G F+ SG F Sbjct: 239 AKATLNDFHLNFDGYFAMPTDDYDMDINFATTDTEFKNVLSLVPGMYADGFDDLETSGEF 298 Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEE 336 S I + +P + D + + + L + G E MH +E+ ++ Sbjct: 299 DFSG---YIKGIYSDTKMPGFAVDLVVRDGFVKAPDVPLPIEKIGLE-MHAKSESGDLKD 354 Query: 337 EEKKNKNDDLKKDDIQYSVNKKEEKDNS 364 + KN L D +++ +S Sbjct: 355 GLLELKNFGLTIDQDRFTAQAVVNNFDS 382 >gi|91793379|ref|YP_563030.1| AsmA [Shewanella denitrificans OS217] gi|91715381|gb|ABE55307.1| AsmA [Shewanella denitrificans OS217] Length = 614 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 32/308 (10%), Positives = 93/308 (30%), Gaps = 26/308 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + L ++ + + L D F+ + G+++ +K + P Sbjct: 1 MKLIKWLLAIALTLCVSLVLYITLLFDVNAFKPELIELVKKQTGRELQIKQDLSWSFFPK 60 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + I + + K++G+ PL S ++++ + +D +N + Sbjct: 61 LGIDLGGIILSNPQGFKTDEMIKVKGVVASVALKPLFSNKVQIEQLLLDGVEINLVTTQD 120 Query: 120 GVSNWF-------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 G S+ + S + + + + V ++ II+ D + Sbjct: 121 GRSSLDGLVAENAPNRAPEVTQESLSKGSGQFTMDELSIGGVRVTNAKVNIINLAQDSLT 180 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 L+ + L S L + + + + + + I Sbjct: 181 TLNLKEFTLGKFSLGQASQLQYEF-EMAANINVSSQGKGLLTVSSDLSKLSIDGLDIKTT 239 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF----SKLLNLELSAKKSRLSGNF 276 + L I + G L + + S + + + +++ + Sbjct: 240 MSGDALPETINTAMIGALSLDINRQALQLTLDKLSAQDFSGSADIGVNYANPIPKINLSL 299 Query: 277 KISDGNVR 284 + + ++ Sbjct: 300 VLDEMDLD 307 >gi|85859654|ref|YP_461856.1| ATPase involved in pili bigenesis [Syntrophus aciditrophicus SB] gi|85722745|gb|ABC77688.1| ATPase involved in pili bigenesis [Syntrophus aciditrophicus SB] Length = 1185 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 99/307 (32%), Gaps = 32/307 (10%) Query: 2 LRRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +R+ L F + L+ F P + + +G+K++V +H+ P Sbjct: 21 IRKAAYSLIGFFVLFSLILFFAGPPL-----LKSYLTDSLSRTLGRKVSVG---AVHVNP 72 Query: 61 -FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 S+ D + +++ + + M A+ +L + ++ + QP++N ++ Sbjct: 73 LKLSMAVDDFSLAERDGKTPFISFKQAYMNAQLASILFAGPVLSEIRLTQPYVNLVRTAN 132 Query: 120 GVSNWFQ-----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 N+ + L I + GRI+ D+ + + + DL+L Sbjct: 133 NTYNFQDIVDRLSTPPTESQQKPSKPMRFSLNNIRITQGRIEFDDRPKYRRHEIHDLSLA 192 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 I + + E + + + ++ SL ++L L Sbjct: 193 IP------FLSNLFYRVDKYIEPEFSAVVNGAPFHLTGKSKPFDADREASLNLKLNRLGL 246 Query: 229 PIII-----DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 + L +L F D + L L +A + L V Sbjct: 247 SEYLTYVPKKLHFSLPGGTLDADIKVAFVQPEDKAPSLQLSGAASLNNLKLEEAKDTPTV 306 Query: 284 RISRYKL 290 R+ + Sbjct: 307 RLKSLNV 313 >gi|120599056|ref|YP_963630.1| AsmA family protein [Shewanella sp. W3-18-1] gi|120559149|gb|ABM25076.1| AsmA family protein [Shewanella sp. W3-18-1] Length = 608 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 44/345 (12%), Positives = 116/345 (33%), Gaps = 24/345 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + L L ++ L+ + +F D DF+ + G+++ + + P Sbjct: 1 MKLIKWFLAILVTLALLVTLYLTVFFDPNDFKPEIVNAVKKQTGRELVIADDLSWTFFPA 60 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + I + E + + +PL EI+V + +D ++N Sbjct: 61 LGINLGGISLSNPEGFTPKSMLDVNKAVAEVALIPLFRKEIQVAQLSLDGANINLVTRKN 120 Query: 120 GVSNWFQRKSTMDM---------------IHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 G S+ T + +V + + + +I +ID+ + + Sbjct: 121 GSSSLDGLTGTDPSVKSSSTAAPASSPAQLASVEVGGVSITNTQINMIDETKGETQTFTL 180 Query: 165 LNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 + + L+ +P++ + + ++G G R ++ + + Sbjct: 181 DSFTLGTFSLDKFAPIAYEFTATLSDMKITSKGEGELKLSRDFNQLVIEKLKIDTVVEGN 240 Query: 221 -IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 I L + ++ L + + + + + S L + K ++ +F++ Sbjct: 241 SIPNQKLTTALSVNTEIALDKKQLLADITQLNAADINASGKLTVNYGTKVPQIKADFQVG 300 Query: 280 DGNVR--ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA 322 D +V + + + + S + T+ L+ S A Sbjct: 301 DIDVDSLLPKSEATANGAPVSAGAEQATEPDLSALKSLDLSVKLA 345 >gi|237747637|ref|ZP_04578117.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229378999|gb|EEO29090.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 1093 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 42/367 (11%), Positives = 99/367 (26%), Gaps = 39/367 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-P 62 R +F V+LV FI + + +K++ K+ PF Sbjct: 15 RFAKWFQIIFIVLLVAYGLTGFFIVPDLINKKAQEFVAEKFQRKLSFT---KVSFNPFTL 71 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + F+ +++ + + + + L + V + + P + Sbjct: 72 TADFEGMQLSEHGSENGFASFDHLLVDFSAESYFRLAPVVEKLTLTNPKIRLERQEDNRY 131 Query: 123 N------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 N + D + I +K G ++ D+ ++ +F+ +LNL I Sbjct: 132 NIDDFVAFAMEPKEDDSSAKFAVNNIQIKNGLVEFDDKPKNKRHFVDELNLTIP------ 185 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 + V + +N++ + + ++ ++L + I Sbjct: 186 FISSLPSQVNIFVDLALSAKVNNEKIEISGKTRPFFRERDGTVNLKLDSIDLVSYIS--- 242 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR---------ISR 287 L + + G S + E + G + + I Sbjct: 243 YLPFKPGFKLKDGKLSTD-LEIGFVKPEEGKMGLFVEGRIDLDAFQLADLNGADLLKIPE 301 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347 ++ + V+ D N + E + Sbjct: 302 LDVKIDKSD---VLSGNLAVNL-------VELKYPVVSLDRNRKGQWNFERMFATVNGKS 351 Query: 348 KDDIQYS 354 K + S Sbjct: 352 KPQKETS 358 >gi|161519850|ref|YP_001583277.1| hypothetical protein Bmul_3301 [Burkholderia multivorans ATCC 17616] gi|189353971|ref|YP_001949598.1| membrane protein [Burkholderia multivorans ATCC 17616] gi|160343900|gb|ABX16985.1| protein of unknown function DUF748 [Burkholderia multivorans ATCC 17616] gi|189337993|dbj|BAG47062.1| membrane protein [Burkholderia multivorans ATCC 17616] Length = 1264 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 100/334 (29%), Gaps = 42/334 (12%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65 IGLG L +VL G F R E+Q + +G+ ++ +I + P+ ++ Sbjct: 28 IGLGILIFLVLFGLLG--FFAAPPLIRHVAEQQLSEQLGRPATIR---RIALNPYTLNLE 82 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 DI + ++ I L +R + L G V ++ +D P N+ Sbjct: 83 ADDIHVGERGGQGDFVDIGKLVVRPSWSSLFRGAPIVNEVRLDSPRFRIVRYDAQRFNFT 142 Query: 126 Q-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + I V GRI D+ ++ + + + L + Sbjct: 143 DLIEKFSTPPKPDSKPTLFSVSNIQVNNGRIDFDDRLLNEKHVVDEWTLGVP------YI 196 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID----- 233 V + FD A A+++ + ++ L P +I Sbjct: 197 ATLPSKTDIFVEPKLRMRFDGSPIAIDGKTKPFAQSRESEIALKFDKLDVPKLISYVPAK 256 Query: 234 LFGNLFWNEKQPIYSGVFSVAG----------DFSKLLNLELSAKKSRLSGN-------- 275 L + S F ++G + A + + Sbjct: 257 LPVAVTSGLLSSDLSVNFVMSGDTPALRVSGTVDLADAKVTGPASEPLFAARGVHVAAAG 316 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + + +L + + S D+ V + Sbjct: 317 LEPLRNAMHFDEIRLDRPVIDLSRDKQGVLNVEK 350 Score = 49.9 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 99/356 (27%), Gaps = 59/356 (16%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 +V D ++ G+ + A L L + ++ +D+P ++ +GV Sbjct: 288 TVDLADAKVTGPA-SEPLFAARGVHVAAAGLEPLRNAMHFDEIRLDRPVIDLSRDKQGVL 346 Query: 123 NWF------------------------------------QRKSTMDMIHNVILEKIHVKG 146 N Q T ++ + + + G Sbjct: 347 NVEKLAGSPAAAPKPASAAGNGASRAAVAAASAPAASGAQAADTKTPPLDLTIRHVAIDG 406 Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA-FK 205 G + + D+ LS + + L +++ A+ T + R K Sbjct: 407 GTVNLDDRVPATPTALS---------LTKLAATLDGFALQRKTPAKYTLSTSLSRGGDLK 457 Query: 206 ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA-GDFSKLLNLE 264 K + K+ + LA + L L + + G + Sbjct: 458 AEGAVDVAAKQVDTKLVVDALAL---VPLQPYLGEATRARVLDGALGATINAKADWGKTP 514 Query: 265 LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 L A+ + + + K +I+ + + K V+ + + +G Sbjct: 515 LDAQVA--DSELSLKSLKLATPDAKSPAIVLPDARAKIAKVDVAARTAEIASVDAHGLAL 572 Query: 325 MHD------LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374 ++ F + + + + + D + KE NF+ Sbjct: 573 DVKRLKNGNIDLAAFASPAQPAVPQRTVARKAQAAAPSWHYRIDALNVKEASANFT 628 >gi|149915898|ref|ZP_01904422.1| AsmA family protein [Roseobacter sp. AzwK-3b] gi|149810221|gb|EDM70067.1| AsmA family protein [Roseobacter sp. AzwK-3b] Length = 660 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 36/322 (11%), Positives = 81/322 (25%), Gaps = 29/322 (9%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESK 82 L + + Q + G+ + G I P V ++ + + Sbjct: 23 LLLPGDRIAKIAAEQISTATGRDVIFSGRTTISFYPVLGVSTGEVLVANAGWSDAGPMLE 82 Query: 83 IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW--------------FQRK 128 + L + E + L GEIR+ + P + ++ G NW + Sbjct: 83 ADSLKIGVEPVALFGGEIRITGLEAVNPRVLLERAADGRVNWEIGVEGVAPSGQSSPGQP 142 Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188 + + L++ + ++ D + + L ++NL + + + + Sbjct: 143 AARSERLALTLDRALITDAQVTYSDHGTGETLTLQNINLDLRWPDYDGAATFEASARPAG 202 Query: 189 VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248 + +G D L + + D + + S Sbjct: 203 SVVTISGELDQ--------VGTFIAGGVTDLLATISTSGGTVDFDGRAGV-LPQLGGRLS 253 Query: 249 GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL---QSILPNSSTDEDNKT 305 S F + + ++ +L S L Sbjct: 254 AELSDTAAFLAAFGVSGVDIPQGMGRAISVATDMTLSENMRLSLRDSALALDDNRLTGAA 313 Query: 306 KVSQDEE-NLLNFSENGAESMH 326 + E LN Sbjct: 314 DIFLGGERPRLNAQLTARSLDF 335 >gi|260463550|ref|ZP_05811749.1| AsmA family protein [Mesorhizobium opportunistum WSM2075] gi|259030641|gb|EEW31918.1| AsmA family protein [Mesorhizobium opportunistum WSM2075] Length = 617 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 40/339 (11%), Positives = 102/339 (30%), Gaps = 35/339 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR + +G V+ + +PL R+ + + G ++A+ G +I + P Sbjct: 6 IRRGVWAIGAAVIVIALVVAALPLIASTRIVRDRIAWEMSAWSGFRVAIDGSPRIEVWPN 65 Query: 62 PSVFFKDIRID--QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 D+ + D + E + + + L G++ + +P + S+ Sbjct: 66 FRAILTDVTLSKWTDTDAPPVVEAERVEVDLSAMAALRGDVEFSTARLVRPTIRVQRSAD 125 Query: 120 GVSNWFQRKST-------------MDMIHNVILEKI-HVKGGRIKIIDQESDQVYFLSDL 165 G+ L+K+ G ++ D ++ + Sbjct: 126 GLFLPTAPTGGRIARSIDAARGVVSANPAKPDLDKLPTDTFGTVEFRDGR-----MVASV 180 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL-KIQLF 224 N + ++ + ++ + TG + + + P A + + L Sbjct: 181 NGKDVEILSSLSGQATWAAMNSNATLSATGIWRGESVTVDAASAKPLVLFAGGMAPLALS 240 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK--------LLNLELSAKKSRLSGNF 276 A P G +E + G A + + + +S Sbjct: 241 LKAAPATFSFDGTASMSE-NAYFDGQVKFAAPSLRRVLEWTQAGIAPSAAIGSVSISSKV 299 Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315 S G ++ ++ +++ +S + + Sbjct: 300 TASAGRIKFEN---TALALDNNPGM-GALDLSLGDAQPV 334 >gi|261378884|ref|ZP_05983457.1| AsmA family protein [Neisseria cinerea ATCC 14685] gi|269144700|gb|EEZ71118.1| AsmA family protein [Neisseria cinerea ATCC 14685] Length = 706 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 48/380 (12%), Positives = 116/380 (30%), Gaps = 26/380 (6%) Query: 4 RVLIGLGFLFSVVLVGAFT---VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 R+ + L ++L V + R ++ +KI+ I+ +LP Sbjct: 11 RLKYAVAVLTILLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLP 69 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 P+V K++ I + I+ + + L S +I+V + L KG Sbjct: 70 RPTVILKNLTITEPGGDRTAVSIKETKIGLSWKNLWSDQIQVEKWVVSGAELALTRDGKG 129 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 V N + +I ++ +++ + + L ++ L + + + Sbjct: 130 VWNIQDLIDNPKRKA--SVNRIIIENSTVRLD--FLQERFTLKEVRLNLQSPVSSGQQFE 185 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 S ++ G + ++ +K N P + + + + I + GN Sbjct: 186 SSGTLTGE---NLSASWKSKGLFISDGINPPEIS-PFHFEAETALNGHGITVSTTGNPTI 241 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 + NL L+A+ L+ + ++ + + + ++ Sbjct: 242 RFNASGPDATNLSLRADTAFHNLHLTAQIPTLA--LRNNNIKIETVNGTFTATANDGNSQ 299 Query: 301 EDNKTKVS-------QDEENLLNFSENGA----ESMHDLNETDFFEEEEKKNKNDDLKKD 349 K+ S N ++ L + + L Sbjct: 300 WGGSFKLDKAKLHPGIGNIGNAEISGNVKTPRLQTNFSLGSPLVWSRNNG-LEAPRLHVS 358 Query: 350 DIQYSVNKKEEKDNSHDKEN 369 +Q +VN+ + + Sbjct: 359 TLQDTVNRLPQPRFISQLDG 378 >gi|170076676|ref|YP_001733314.1| hypothetical protein SYNPCC7002_A0041 [Synechococcus sp. PCC 7002] gi|169884345|gb|ACA98058.1| conserved hypothetical protein [Synechococcus sp. PCC 7002] Length = 1931 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 45/389 (11%), Positives = 113/389 (29%), Gaps = 18/389 (4%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 +R++ G + + + + E+Q + + I + + Sbjct: 22 QRLITGAAVGLVLAVGAGLGYGRYYIYQRLSPQIEQQLNKQIDRPINLGSVQGFSLG--- 78 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + F + D + + +E +++ LL+ ++ + P + + Sbjct: 79 GLRFGPSELPPTADSNDQLLVEAIAVDFNLWTLLTQRRLDLNLTLINPQVTVEQNQARRW 138 Query: 123 --NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 V + I ++ G++ +I ++ + L I++ + + Sbjct: 139 LDLNIAPDDPDTEGLEVNINNIRLRRGQLTLIARQRSGTLS-PPVQLAIASGKGRLTNQN 197 Query: 181 SI--------DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + G + EG +F+ + S +I A +L + + ++ Sbjct: 198 KVINFDVQGKLASGGDLNIEGILDFEQETSNLRIRAQKLDPVAISNLVVPPVTFSGGVVD 257 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 ++G G + L + SG + ++ + + Sbjct: 258 GAIELFLEEGDLSDWNGELMAEGSTLIVPALTKPVE--DFSGKIGFQNQELQFQQTTGRL 315 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD--D 350 S D + + + +E E+ F E + Sbjct: 316 GTLPFSGDLNINFETGFTGQIETAPAEIAQILDTFELESPAFPVEGQLATTVTFGGPLEQ 375 Query: 351 IQYSVNKKEEKDNSHDKENQENFSGDKMI 379 IQ +V D+ E F GD I Sbjct: 376 IQLAVAATNASQLKVDRLTLERFQGDLTI 404 >gi|319795405|ref|YP_004157045.1| asma family protein [Variovorax paradoxus EPS] gi|315597868|gb|ADU38934.1| AsmA family protein [Variovorax paradoxus EPS] Length = 670 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 42/367 (11%), Positives = 84/367 (22%), Gaps = 36/367 (9%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSF--ESKIE 84 W RE R + G+K + + + + +V F I K + Sbjct: 34 PWDVLREPVNRYVSEKTGRKFEITRRLDVDLGWRAATVKFDGIEFANPSWARDPYLVKAD 93 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV 144 PL++ +I + + + P L + G W K T D + + + Sbjct: 94 RAEFDIRIWPLVTSKIVIPRLALFSPTLGLQMEQDGRRTWAFGKDTSDGGTVPSIGLMQI 153 Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204 G I + + + G + + Sbjct: 154 DSGAIDFLAKHLGVDLHAD--------------VKYDTSLGAMPLSYRIKGRYKGQPLTA 199 Query: 205 KITANFPA---KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261 A +++ A + G + F + G L Sbjct: 200 DGRTGNVLQINAAGAPPFPLEINAAAGQTKLKASGTVAELASLDGVDAKFQLKGQTLGAL 259 Query: 262 NLELSAKKSR-----LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD-EENLL 315 L + LSG+ +++ K + L + + Q + L Sbjct: 260 FPLLGIALPQTSPYALSGDLSKRGTLWQVAGLKGKLGLSD----IAGDMRFDQATQVPYL 315 Query: 316 NFSENGAESMHDL------NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369 D + ++ K D E Sbjct: 316 AGDLRSKVMDMDDLGPLIGLPPTARSAGAVEGVAPPPSITQVRRPAGAKVLPTAPLDFER 375 Query: 370 QENFSGD 376 + D Sbjct: 376 LRAMNAD 382 >gi|226940160|ref|YP_002795233.1| hypothetical protein LHK_01233 [Laribacter hongkongensis HLHK9] gi|226715086|gb|ACO74224.1| Putative exported protein [Laribacter hongkongensis HLHK9] Length = 719 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 87/304 (28%), Gaps = 11/304 (3%) Query: 6 LIGLGFLFSVVLVGAFT--VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 G V + AF + D R+ E + G+ + V GGI P P Sbjct: 12 FAVFGMASVAVFIAAFLSLLYWQFDSHSARQKLEAAFSAH-GRILHVNGGISPVFWPKPG 70 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 + D+ + + + S +++ + +R + PLL + + + G N Sbjct: 71 IAANDVTLTEADGSSPFARMRRIELRFAWFPLLQKHYTIERLRLTGLDATITRQVDGSLN 130 Query: 124 WFQ-RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + D +V L+++ + G + + D LS L + + + S Sbjct: 131 IADLLQPQPDQEVDVRLDRLELYDGTLALRDIAQQARIGLSALRIDATDLQSDGDIEFSA 190 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242 + G G + + +I L P L N N Sbjct: 191 TTEWGKYRFPVEGETPIRIADDQIELAGLRLQTTGKL-----PPVQSFQAQLTANTRINL 245 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 + + + G K + E + S + +Y I Sbjct: 246 AKSLIAA--DKVGFTLKTSSPEAGLTLNAPSLEISQDGLRIPSLQYAGNLIGSEGKHSLH 303 Query: 303 NKTK 306 Sbjct: 304 GTAS 307 >gi|190890426|ref|YP_001976968.1| hypothetical protein [Rhizobium etli CIAT 652] gi|190695705|gb|ACE89790.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652] Length = 629 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 93/348 (26%), Gaps = 38/348 (10%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66 + L + + P I R E + G + +KG + P P + Sbjct: 29 VLLLIALGLFVALRVAAPYLITTGFVRSGIEDALSKWTGYQAEIKGDPVLEFWPTPRITL 88 Query: 67 KDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124 ++ I Q +IE LS + L G + ++ +P+L KG+ +W Sbjct: 89 NEVTIRQPRESGDKLLGRIESLSADFSLIDALRGRTSFHEFHLLRPNLALTRDEKGLIDW 148 Query: 125 F---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 +D + + + V+ G + D S + Y + I Sbjct: 149 SYAGLLARAISGVRYENGAEVLDPALDAEIGAVTVEDGTFAVTDIASAKTYHFDSVTADI 208 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 + L+ + + + AF + + +L Sbjct: 209 AWPRLSGAISAVVIARNNGEDLKVDFASRQPLLAFAGKSAETRTSLTSNL---------- 258 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDG 281 + + G SG +V+ L L + S Sbjct: 259 LTVRFQGIASIASLSA-LSGNIAVSIADVPALLTWSGRSIPGIGTLKSASLESDIMSSGN 317 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 +R + L +++ D + + + + Sbjct: 318 GLRFNDLSLSLNEASATGVMD--LSTEPGKRPKIGGTLAFDQMNLKPF 363 >gi|149912137|ref|ZP_01900723.1| AsmA protein [Moritella sp. PE36] gi|149804785|gb|EDM64827.1| AsmA protein [Moritella sp. PE36] Length = 642 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 115/335 (34%), Gaps = 31/335 (9%) Query: 2 LRRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +++VL+G+G L +++ +VG + ++ +++ QA + + + ++G + + P Sbjct: 1 MKKVLLGIGGLIAIIFIVGVIAMKFLVNEELIKDNLIEQAKQLTKQDVTIEGDLHLTFYP 60 Query: 61 FPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 + + K S + +++ + E + LL+ I V ++ +D +N S Sbjct: 61 QIGFELGKLTLFNKHEYSDSTQIEVKSVHAAVELMSLLTKTIVVTNVKVDGLTVNVETLS 120 Query: 119 KGVSNWFQRKSTMDMIH------------------------NVILEKIHVKGGRIKIIDQ 154 G +N + + + ++E +++ ++ + ++ Sbjct: 121 DGRNNMDELLARLAPPEKPLSNEDIQAIKVTSEGEIAKSEYQFVVEGVNITNAQLSLNNR 180 Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214 + + LSD +L I +++ + + N + + Sbjct: 181 QDGTYHKLSDSSLNIGEFAFGKPVAITLAANYRTNELTAKLNTSMVLTVDEQFNEIKLAQ 240 Query: 215 KAISLKIQLFPLAYP-IIIDLFGNLFWNEKQPIYS---GVFSVAGDFSKLLNLELSAKKS 270 L + L P + I L G+L ++ +V K Sbjct: 241 LDNKLALTGKLLPRPEMNISLQGDLTYDNAYKTVKFVGLKLAVDELTVTGDLSVDVFSKP 300 Query: 271 RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 + N ++ V K++ N+ + Sbjct: 301 SIEYNLAMNTLVVDDWLPKVKPASTNNESAAKGAA 335 >gi|212635546|ref|YP_002312071.1| AsmA protein [Shewanella piezotolerans WP3] gi|212557030|gb|ACJ29484.1| AsmA [Shewanella piezotolerans WP3] Length = 605 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 107/349 (30%), Gaps = 30/349 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + L +V + L D DF+ G+ +A+ + P Sbjct: 1 MKLLKWFFVALLGLVAALVLYITLIFDPNDFKPQIVEVVKEKTGRDLAINSDLSWTFFPS 60 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + I + + + + +PLL+ E+ + + +D L+ Sbjct: 61 LGIKLGGITLSNPDGFENAAMVSVNEVVAEVALMPLLTKEVEISQLNLDGLTLSLETQKD 120 Query: 120 GVSNW---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 G S++ +++ + + + I + +I +D++S+ LS Sbjct: 121 GRSSFDGLTGGGNSSEASKRPANEASSVSLSKLDIGGISITNTQISNLDRQSNTKQLLSL 180 Query: 165 LNLQISARFLNIISPLSIDSIKGSVIA----EGTGNFDNKRSAFKITANFPAKNKAISLK 220 +L + L+ +PL + G G ++ I N A + K Sbjct: 181 KSLTLGRFQLDQFAPLKYELSASLADLNVTSSGEGQIKVSQNLQLIVINDFAVTNQLKGK 240 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF--KI 278 + DL +L + S V + + +L N ++ Sbjct: 241 ---GVPNGELKADLTTSLEMALDKQTMSLVLASFNAADIDASGKLDIAYGNKVPNIMAEL 297 Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 G+V + R+ + + + K + E L D Sbjct: 298 EVGDVDLDRFLPKESTKTDDIKKTDTAKAA-AVEPDLTVM---KSVNLD 342 >gi|256421015|ref|YP_003121668.1| AsmA family protein [Chitinophaga pinensis DSM 2588] gi|256035923|gb|ACU59467.1| AsmA family protein [Chitinophaga pinensis DSM 2588] Length = 892 Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 117/350 (33%), Gaps = 36/350 (10%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK----- 55 ML+++L +G V+++ A +P F F+ + K++ K Sbjct: 1 MLKKILKIVGIFLLVLVIAAIAIPYF-----FKGKIMSIVKTELNKQLVADVDFKDVDIS 55 Query: 56 -IHILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPH 111 I P +V +D+ + + G ++ + + + ++ G+ + ++++ I P Sbjct: 56 LIRHFPRLAVALEDLSVVNRAPFAGDTLFAVKKIDLALNLMSVIKGDKMDIYNVDIVAPR 115 Query: 112 LNFYLSSKGVSNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 ++ ++ +G+ NW T + L++ ++ I+ D++ D + Sbjct: 116 IHAIINKQGLVNWDITKPDTAQTTPADTATTKFALNLQQYSIEDATIRYDDEQGDMGMLI 175 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 LN Q F + L + V T + + A +++ Sbjct: 176 EGLNHQGKGDFTQDLFTLQTTTQAEGV----TFRYGLIPYLLRTKTTMDAD-----IQVD 226 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 Y G N + + G F + D + ++L + A ++ + Sbjct: 227 NKTSTYTFQ---KGKATLNNLELAFQGFFKLIDDSTYGMDLTMKAPSTQFKDILSLVPA- 282 Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETD 332 + + + ++ D K S + + + + Sbjct: 283 IFMQDFDKIKTSGTAAFDGYVKGTYSATQMPAFGLNLAVKDGFFQYPDLP 332 >gi|167587976|ref|ZP_02380364.1| Putative transmembrane protein, AsmA-like [Burkholderia ubonensis Bu] Length = 248 Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 75/229 (32%), Gaps = 19/229 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLF---IDWTDFREDFERQATLIVGKKIAVKGGIKI- 56 + R + L V V + +F DW R + + + +G++ ++ G +++ Sbjct: 3 IARPFGKIVAALIVTVAVVVGGLAVFVQTFDWNRARPWIDDKVSEAIGRQFSINGDLRVD 62 Query: 57 -----------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVF 103 +P+P ++I I + + ++ + LPLL I + Sbjct: 63 WHRPPFEHGWRAWVPWPRFTARNIVIANPDWARAKAFATLDAIGFDVAALPLLDRRIVIP 122 Query: 104 DMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYF 161 + + P ++ G NW + + + L I GR D+ Sbjct: 123 SIELVNPSVDLERLKDGRENWTFKLKSAARPRTWTLDLHDIAFMKGRAAYYDEVKHADLK 182 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF 210 + L F +++ S + S G+ + + + Sbjct: 183 AAIDTLGQPIPFGDVLRQQEKSSRQESAGVVGSTSASKLNAQVRAKTAP 231 >gi|120556085|ref|YP_960436.1| AsmA family protein [Marinobacter aquaeolei VT8] gi|120325934|gb|ABM20249.1| AsmA family protein [Marinobacter aquaeolei VT8] Length = 741 Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 59/390 (15%), Positives = 120/390 (30%), Gaps = 50/390 (12%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLS 87 + D++ E + ++G I +P + ++ DG +E L Sbjct: 30 NPNDYKPQIEAAVEKQTNLDLMLEGDIGWSFIP-LGLELNEVE--ANLDGERFVALEQLI 86 Query: 88 MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------------------- 124 + +F L++ +V ++ + ++ +G NW Sbjct: 87 AQIDFWSLIAMSPQVNTFLLNGLDAHLEVNEQGEGNWTRIMREQNATAEAGTDAAEQQPA 146 Query: 125 -----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 + +S N +E + + + D + Q L D + S L P Sbjct: 147 QETAEPEPQSASGEALNFNVENVEISNASVHYNDLSTGQSVTLEDFTVTASDITLGSEFP 206 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKIQLFPLAYPI-----IID 233 L I + + + + +I AN A+S L P + Sbjct: 207 LDIRFRVETSQPQFAVDGN---IKARIQANQALNEFAVSGLNAVFDMSGEPFGGESVTAE 263 Query: 234 LFGNLFW---NEKQPIYSGVFSVAGDFSKL-LNLELSAKKSRLSGNFKISDGNVR--ISR 287 L G+L NE + S+A LN++ K L G +IS+ +++ ++ Sbjct: 264 LAGSLAANLENETASLSDFSASLANLSLNTNLNVKGFGDKPALDGRIEISEFSLKELLNN 323 Query: 288 YKLQSILPNSSTDEDNKT-KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346 +I + E + + + D +T F L Sbjct: 324 LGQPAIETTDPEVLKAIALSTNLGGEPGV-VALSDLVITLD--DTRFNGGGSYNLATGGL 380 Query: 347 KKDDIQYSVNKKEEKDNSHDKENQENFSGD 376 D +N S + ++Q +G+ Sbjct: 381 VFDLEGDKLNADRYLPPSAEGDSQGAGNGE 410 >gi|300311615|ref|YP_003775707.1| outer membrane biogenesis protein [Herbaspirillum seropedicae SmR1] gi|300074400|gb|ADJ63799.1| outer membrane biogenesis protein [Herbaspirillum seropedicae SmR1] Length = 654 Score = 106 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 52/332 (15%), Positives = 93/332 (28%), Gaps = 45/332 (13%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHIL---------------PFPSVFFKDIRID 72 DW + RQ + +G+ I V G + + P + + + I Sbjct: 41 DWNSAKPWLGRQLSAALGRDIRVDGNLDLSWSLAQADDEAGALARLAPQLRLRAERLFIG 100 Query: 73 QKEDG---SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKS 129 + + L +R LPLL V D+ ++ L + NW Sbjct: 101 NPDWAHSSDHLVRAAALDVRFSPLPLLHWHWHVTDLRVEGLDLVMERADDQRKNWRFSS- 159 Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189 + + +I I+ ++ DL+L+ AR LN + DS + Sbjct: 160 QPRSRWSFDIHRIVFGHALIRYVELPL-------DLDLRFDARPLNATATNQKDSAALVL 212 Query: 190 IAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 A TG + +I N+ +Q + L GNL + Sbjct: 213 QAAVTGRYGQAEVNGQIKGGALPDLLNEGSVFPLQAEGDIGGVQTQLSGNLINPHQLSRA 272 Query: 248 SGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDG-------NVRISRYKLQSILP 295 +AGD L G I+ + R S + + Sbjct: 273 DLRIGLAGDSLDRLYPATGVPLPATRAFHTEGALTITRLDPQTKAWDWRYSGFSGKVGES 332 Query: 296 NSSTDEDNKTKVSQD-EENLLNFSENGAESMH 326 + + + +N L Sbjct: 333 D----FAGDAQYVRGPPKNHLKVKAEAGLLRL 360 >gi|39995980|ref|NP_951931.1| hypothetical protein GSU0874 [Geobacter sulfurreducens PCA] gi|39982745|gb|AAR34204.1| hypothetical protein GSU0874 [Geobacter sulfurreducens PCA] gi|298504995|gb|ADI83718.1| conserved hypothetical protein [Geobacter sulfurreducens KN400] Length = 1080 Score = 106 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 111/319 (34%), Gaps = 27/319 (8%) Query: 3 RRVLIGLGFLFSVV--LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAV-KGGIKIHIL 59 +++L+ + +++ LV V + +++ + + + + G + + Sbjct: 7 KKILLYVAVPLALLCGLVFTVLVARLHELDTYKDQLLAEIRKELNRPVTYRTGEVSLRFG 66 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + F D++I +++ + + + + R LPLL ++ + + +++P + + Sbjct: 67 P--AFTFTDVKILERDGSTPFATVATIRFRLAILPLLEKKVILRRVELEKPVVQLVRNKD 124 Query: 120 GVSNWFQ--RKSTMDMIHNVILEKIHVKGGRIKIIDQES---DQVYFLSDLNLQISARFL 174 G+ N R+ + + + VK G + D + V L + +L I Sbjct: 125 GILNIDDLLRERETKSTMELRVRGVRVKQGNLIFTDHAAVGGPLVTALREADLFIGRLVR 184 Query: 175 NIISPLSIDS------IKGSVIAEGTGNFDNKRSAF-------KITANFPAKNKAISLKI 221 SP+SI+ + V EG K + +++ + + Sbjct: 185 GKESPISIEGRLVDGKNESPVAIEGKLKLPAKNAPLTTAHLDARVSLHNINASHYWPYYS 244 Query: 222 QLFPLA-YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL---ELSAKKSRLSGNFK 277 L P +L + + G VAG + L+ RL+ + Sbjct: 245 NLVPFQRMSGRFNLDCTVDGTPLEFTSKGSLQVAGLRFVYPEVFRQPLTPADVRLAYSLT 304 Query: 278 ISDGNVRISRYKLQSILPN 296 + V IS + Sbjct: 305 RTPKEVNISSVDFRMDGLT 323 >gi|238027216|ref|YP_002911447.1| AsmA family protein [Burkholderia glumae BGR1] gi|237876410|gb|ACR28743.1| AsmA family protein [Burkholderia glumae BGR1] Length = 755 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 16/156 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIR 70 + DW R ++ + +G+ A++G +K+ +P+PSV DI Sbjct: 28 FIVTFDWNRARPWINQRVSTEIGRPFAIRGDLKVGWQRPRDETGWRAWVPWPSVTANDIA 87 Query: 71 IDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128 I + + ++ LPLL+ + + + I P L+ + G +NW + Sbjct: 88 IGNPDWTRSPQFATLDAARFELAVLPLLAHRVVIPSIDIVNPALDVERLADGRNNWTFQF 147 Query: 129 STMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFL 162 V L G + D + + Sbjct: 148 KQSGEPSTWKVELHDFGFAKGTVTYRDAITKADLKI 183 >gi|145588896|ref|YP_001155493.1| AsmA family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047302|gb|ABP33929.1| AsmA family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 609 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 39/278 (14%), Positives = 88/278 (31%), Gaps = 20/278 (7%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +++ +L+GL SVV GA+ I+ + G+ + + G + + + P Sbjct: 4 LVKIILLGLAIFLSVVGAGAWYASSLINPAHLSQLIISSVKDATGRNLTISGPVSLKVFP 63 Query: 61 FPSVFFKDIRIDQKEDG----SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 +V + + ++ L + LPL ++ + + I +L Sbjct: 64 SVAVTADQVSLSNATWASNTDPNMLVVKHLEFEIKLLPLFKKQVEISTINIAGLNLYLQT 123 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 + G NW T+ + DQ+ + + +++ + Sbjct: 124 NKAGQENWDL---TLPAAPFTAAANSAINPSASSSEQSLPDQISSIHVTDARVTYKAWGA 180 Query: 177 IS------PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + L + +G + ++ + A K + P+ Sbjct: 181 PTKSISIPKLIYEGREGKSEFDAQADYSGYQFALKGKTGNLR-------SMFNAWDDKPV 233 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268 DL L N K + G +++LS+K Sbjct: 234 KADLDFTLTLNGKTMLIQGSVDKKPKALAKFDVQLSSK 271 >gi|167587092|ref|ZP_02379480.1| AsmA family protein [Burkholderia ubonensis Bu] Length = 754 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 61/186 (32%), Gaps = 16/186 (8%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRID 72 DW + Q + +G+ A+ G +K+ +P+PS+ I I Sbjct: 30 FTFDWNHVKPWVNEQVSAALGRPFAINGDLKVDWRRPDGETGWRAWVPWPSLSATRIEIG 89 Query: 73 QKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--K 128 + ++ LPLL+ EI + + + P ++ + G + W + + Sbjct: 90 NPDWAKAPKFVTLDAAHFDLAILPLLAHEIVIPSIDVVNPAVDLERLADGRNTWTFQFKQ 149 Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188 S+ V L+ G + D ++ L +++ S S Sbjct: 150 SSQPSPWKVRLDSFGFAKGMVTYRDAIMKADLTIAIDTLGQPIPLGDVMKEQEETSRAAS 209 Query: 189 VIAEGT 194 G Sbjct: 210 AQRVGK 215 >gi|221213104|ref|ZP_03586080.1| AsmA family protein [Burkholderia multivorans CGD1] gi|221167317|gb|EED99787.1| AsmA family protein [Burkholderia multivorans CGD1] Length = 787 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 62/154 (40%), Gaps = 16/154 (10%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQ 73 DW R + + + +G+ + G + + + +P+ ++I I Sbjct: 39 TFDWNRARPLIDDKVSAAIGRPFTINGDLTVRWHRAAGETGWRAWVLWPTFAARNITIAN 98 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM 131 + + + +E + + + LPLL+ +I + + + P ++ + G +NW + + Sbjct: 99 PDWAKQRYFATLEQIDFQVKMLPLLTHDIVIPIINLVGPSVDLERLADGRNNWTFKFKSS 158 Query: 132 DMI--HNVILEKIHVKGGRIKIIDQESDQVYFLS 163 + L I + G I + DQ+ V ++ Sbjct: 159 AHPLAWKLDLHDIRLDKGNIALSDQQQGLVMQVT 192 >gi|254672273|emb|CBA05317.1| hypothetical protein NMW_0491 [Neisseria meningitidis alpha275] Length = 704 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 118/381 (30%), Gaps = 23/381 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ + L L + +V + R ++ +KI+ I+ +LP Sbjct: 12 LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I + ++ + + L S +I++ + L G Sbjct: 71 PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 W + + +I V+ +++ + L ++NL + + + Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S V + + + ++ P + + + I I G Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGTPAIR 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297 + NL L+A+ L+ + + + + + Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPALA--LRNNSIKIETVNGAFTAGGEYAQWDG 300 Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 S D K + N+ N +G+ ++ LN + E + + L + Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358 Query: 352 QYSVNKKEEKDNSHDKENQEN 372 Q +VN+ + + + Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379 >gi|221197814|ref|ZP_03570860.1| AsmA family protein [Burkholderia multivorans CGD2M] gi|221204628|ref|ZP_03577645.1| AsmA family protein [Burkholderia multivorans CGD2] gi|221175485|gb|EEE07915.1| AsmA family protein [Burkholderia multivorans CGD2] gi|221181746|gb|EEE14147.1| AsmA family protein [Burkholderia multivorans CGD2M] Length = 784 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 62/154 (40%), Gaps = 16/154 (10%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQ 73 DW R + + + +G+ + G + + + +P+ ++I I Sbjct: 39 TFDWNRARPLIDDKVSAAIGRPFTINGDLTVRWHRAAGETGWRAWVLWPTFAARNITIAN 98 Query: 74 KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM 131 + + + +E + + + LPLL+ +I + + + P ++ + G +NW + + Sbjct: 99 PDWAKQRYFATLEQIDFQVKMLPLLTHDIVIPIINLVGPSVDLERLADGRNNWTFKFKSS 158 Query: 132 DMI--HNVILEKIHVKGGRIKIIDQESDQVYFLS 163 + L I + G I + DQ+ V ++ Sbjct: 159 AHPLAWKLDLHDIRLDKGNIALSDQQQGLVMQVT 192 >gi|121635333|ref|YP_975578.1| hypothetical protein NMC1610 [Neisseria meningitidis FAM18] gi|218768712|ref|YP_002343224.1| hypothetical protein NMA1951 [Neisseria meningitidis Z2491] gi|120867039|emb|CAM10802.1| hypothetical protein NMC1610 [Neisseria meningitidis FAM18] gi|121052720|emb|CAM09063.1| hypothetical protein NMA1951 [Neisseria meningitidis Z2491] Length = 740 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 49/382 (12%), Positives = 119/382 (31%), Gaps = 26/382 (6%) Query: 4 RVLIGLGFLFSVVLVGAFT---VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 R+ + L ++L V + R ++ +KI+ I+ +LP Sbjct: 47 RLKYAVAVLTILLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLP 105 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 P+V K++ I + ++ + + L S +I++ + L G Sbjct: 106 RPTVILKNLTITEPGGDRTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DG 163 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 W + + +I V+ +++ + L ++NL + + + Sbjct: 164 KGVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ--- 218 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 +S V + + + ++ P + + + I I G+ Sbjct: 219 PFESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGSPSV 277 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPN 296 + NL L+A+ L+ + + + + + Sbjct: 278 RFNAGGADAAGLGLRADTSFRNLHLTAQIPTLA--LRNNSIKIETVNGAFTAGGEYAQWD 335 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDD 350 S D K + N+ N +G+ ++ LN + E + + L Sbjct: 336 GSFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVST 393 Query: 351 IQYSVNKKEEKDNSHDKENQEN 372 +Q +VN+ + + + Sbjct: 394 LQDTVNRLPQPRFISRLDGSLS 415 >gi|325136658|gb|EGC59258.1| asmA family protein [Neisseria meningitidis M0579] Length = 704 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 49/382 (12%), Positives = 118/382 (30%), Gaps = 26/382 (6%) Query: 4 RVLIGLGFLFSVVLVGAFT---VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 R+ + L ++L V + R ++ +KI+ I+ +LP Sbjct: 11 RLKYAVAVLTILLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLP 69 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 P+V K++ I + ++ + + L S +I++ + L G Sbjct: 70 RPTVILKNLTITEPGGDRTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DG 127 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 W + + +I V+ +++ + L ++NL + + + Sbjct: 128 KGVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ--- 182 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 +S V + + + ++ P + + + I I G Sbjct: 183 PFESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGTPAI 241 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPN 296 + NL L+A+ L+ + + + + + Sbjct: 242 RFNAGGADAAGLGLRADTSFRNLHLTAQIPALA--LRNNSIKIETVNGAFTAGGEYAQWD 299 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDD 350 S D K + N+ N +G+ ++ LN + E + + L Sbjct: 300 GSFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVST 357 Query: 351 IQYSVNKKEEKDNSHDKENQEN 372 +Q +VN+ + + + Sbjct: 358 LQDTVNRLPQPRFISRLDGSLS 379 >gi|311108740|ref|YP_003981593.1| AsmA family protein 2 [Achromobacter xylosoxidans A8] gi|310763429|gb|ADP18878.1| AsmA family protein 2 [Achromobacter xylosoxidans A8] Length = 839 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 33/326 (10%), Positives = 91/326 (27%), Gaps = 41/326 (12%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82 L D ++ E + + + G I++ + P + + + + + + Sbjct: 26 FLLTFDPNAYKYKLEELVQQRYQRTLTIDGEIELSLFPRIGLSVQGVSLSEPNSPETFAS 85 Query: 83 IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--------------- 127 I+ + PLLS V + I +G N+ Sbjct: 86 IDSTRLAVAVWPLLSNSFVVDHVAITGFKARVMRDKQGQFNFSNLVGGTAPITAAPANPA 145 Query: 128 ------------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 + + + +K G++++ D + ++ +N Sbjct: 146 EALAGAAQSAVQAPANGNLPQPRNNMQIDIAGLDLKDGQVQLQDAITGMAVAVTKINANT 205 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-PLAY 228 N + + + N + + + + L++ P A Sbjct: 206 GRVTFNQPFDVRMTARVEGGNPRVDANLTGQALLTLDPSAKRYAAQKLDLRMDGKLPGAE 265 Query: 229 PIIIDLFGNLFWNEKQPIYSG-------VFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281 + + GNL +N ++ V ++ N++ S +L+ + S Sbjct: 266 AKSLAVRGNLAFNGQKSALDIAGLEVVFQGDVTDPAARATNVDASVAIPKLAIDPHKSQL 325 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKV 307 + + + + + + Sbjct: 326 QIEKLAIRAKGGVADGPFEFAVDAPA 351 >gi|148261665|ref|YP_001235792.1| AsmA family protein [Acidiphilium cryptum JF-5] gi|146403346|gb|ABQ31873.1| AsmA family protein [Acidiphilium cryptum JF-5] Length = 895 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 27/269 (10%), Positives = 74/269 (27%), Gaps = 25/269 (9%) Query: 12 LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71 L + ++G F D ++ A + + +++ G +++ + P++ I I Sbjct: 20 LAPLAVIGLFLAS--FDPNSYKPQVIAAAERALHRPVSIDGRLRMSLSLVPTISATGITI 77 Query: 72 DQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKS 129 + + + + LPLL ++ + D+ + P +N G +W + Sbjct: 78 ANPPGYQNTNLATLRRIEAKVALLPLLRHQLNILDLVLVDPVINLEYGPTGTPDWLIGQG 137 Query: 130 TMD-------------MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR---F 173 V L+ + ++ G I + + + Sbjct: 138 APAPAGTGSGTGSASGPAAGVALQSVSIENGTITYHPPMALVPLNAGQPAALATPQPTVL 197 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-----NKAISLKIQLFPLAY 228 S+ + ++ T ++ + L Sbjct: 198 HIARFTGRAASLDAPLQLAIDAQYNGTPFTVAGTTGPVSRLTGSVAGGAPWPVDLTVSGQ 257 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257 + + G + + Y+ Sbjct: 258 GANLRVTGQIAHPREASGYALHLHATAPD 286 >gi|257483730|ref|ZP_05637771.1| AsmA [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 253 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 68/212 (32%), Gaps = 29/212 (13%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ + L +++ F + D D++++ + A ++ + G I Sbjct: 1 MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60 Query: 58 ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + P+ + D + + ++ L + LPLL ++++ D+ ++ +L + Sbjct: 61 LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120 Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152 G NW + + ++ + V R+ Sbjct: 121 DENGHGNWEDIGKPAVASTETSGETTPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 D + + + L P+ + + Sbjct: 181 DARKGRTFMAESIQLSTGPIREASDIPIKLTA 212 >gi|326405157|ref|YP_004285239.1| AsmA family protein [Acidiphilium multivorum AIU301] gi|325052019|dbj|BAJ82357.1| AsmA family protein [Acidiphilium multivorum AIU301] Length = 895 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 27/269 (10%), Positives = 74/269 (27%), Gaps = 25/269 (9%) Query: 12 LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71 L + ++G F D ++ A + + +++ G +++ + P++ I I Sbjct: 20 LAPLAVIGLFLAS--FDPNSYKPQVIAAAERALHRPVSIDGRLRMSLSLVPTISATGITI 77 Query: 72 DQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKS 129 + + + + LPLL ++ + D+ + P +N G +W + Sbjct: 78 ANPPGYQNTNLATLRRIEAKVALLPLLRHQLNILDLVLVDPVINLEYGPTGTPDWLIGQG 137 Query: 130 TMD-------------MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR---F 173 V L+ + ++ G I + + + Sbjct: 138 APAPAGTGAGTGSASGPAAGVALQSVSIENGTITYHPPMALVPLNAGQPAALATPQPTVL 197 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-----NKAISLKIQLFPLAY 228 S+ + ++ T ++ + L Sbjct: 198 HIARFTGRAASLDAPLQLAIDAQYNGTPFTVAGTTGPVSRLTGSVAGGAPWPVDLTVSGQ 257 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257 + + G + + Y+ Sbjct: 258 GANLRVTGQIAHPREASGYALHLHATAPD 286 >gi|296840769|ref|ZP_06863410.2| AsmA family protein [Neisseria polysaccharea ATCC 43768] gi|296839985|gb|EFH23923.1| AsmA family protein [Neisseria polysaccharea ATCC 43768] Length = 739 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 49/380 (12%), Positives = 114/380 (30%), Gaps = 26/380 (6%) Query: 4 RVLIGLGFLFSVVLVGAFT---VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 R+ + L ++L V + R ++ +KI+ I+ +LP Sbjct: 44 RLKYAVAVLTILLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLP 102 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 P+V K++ I + I+ + + L S +I+V + L KG Sbjct: 103 RPTVILKNLTITEPGGNRTAISIKETKIGLSWKNLWSDQIQVEKWVVSGAELALTRDEKG 162 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 V N + +I ++ I + + + L ++ L + + + Sbjct: 163 VWNIQDLIDNPKRKA--SVNRIIIENSTIHLD--FLQERFTLKEVRLNLQSPVSSGQQFE 218 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 S + G + ++ +K N P + + + + I + GN Sbjct: 219 SSGILTGE---NLSASWKSKGLFISDGINPPEIS-PFHFEAETALNGHGITVSTTGNPTI 274 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 + NL L+A+ L+ + ++ + + + + Sbjct: 275 RFNADGPDAANLSLRADTAFHNLHLTAQIPTLA--LRNNNIKIETVNGTFTATADDGNFQ 332 Query: 301 EDNKTKVSQDE-----------ENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349 K+ + E N ++ L + + L Sbjct: 333 WGGSFKLDKANLHSGIGNIGNAEISGNVKTPRLQTNFSLGSPLVWSRNNG-LEAPRLHVS 391 Query: 350 DIQYSVNKKEEKDNSHDKEN 369 +Q +VN+ + + Sbjct: 392 TLQDTVNRLPQPRFISQLDG 411 >gi|13475460|ref|NP_107024.1| asmA protein, assembly of outermembrane proteins [Mesorhizobium loti MAFF303099] gi|14026212|dbj|BAB52810.1| AsmA protein, assembly of outermembrane proteins [Mesorhizobium loti MAFF303099] Length = 617 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 39/340 (11%), Positives = 103/340 (30%), Gaps = 35/340 (10%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 ++RR + +G V+ + T+PL R+ + + G ++A++G +I + P Sbjct: 5 LIRRGVWAIGAAVIVIALVVATLPLIASTRIVRDRIAWEMSAWSGFRVAIEGSPRIEVWP 64 Query: 61 FPSVFFKDIRID--QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 D+ + D + E + + + L G++ + +P + ++ Sbjct: 65 KFRAILTDVTLSKWTDTDAPPVVEAERVEIDLSAMAALQGDVVFSTARLVRPTIRVQRTA 124 Query: 119 KGVSNWFQRKST-------------MDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSD 164 G+ L+K+ G ++ D ++ Sbjct: 125 DGLFLPTAPTGGRIARSIDTARGVVSADPAKPNLDKLPTDAFGTVEFRDGR-----MVAS 179 Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL-KIQL 223 +N + ++ + ++ + TG + + + P A + + L Sbjct: 180 VNGKDVEILSSLSGQATWAAMNSNATLSATGIWRGESVTVDAASQKPLVLFAGGMAPLTL 239 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK--------LLNLELSAKKSRLSGN 275 A P G + G A + + + +S Sbjct: 240 SFKAAPGTFSFDGTASM-SDNAYFDGQVKFAAPSLRRVLEWSQAGIAPSAAIGSVSISSK 298 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315 S G ++ ++ +++ +S + + Sbjct: 299 VTASAGRIKFEN---TALALDNNPGM-GALDLSLGDAQPV 334 >gi|325130741|gb|EGC53478.1| asmA family protein [Neisseria meningitidis OX99.30304] Length = 704 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 50/381 (13%), Positives = 120/381 (31%), Gaps = 23/381 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ V+ L L + +V + R ++ +KI+ I+ +LP Sbjct: 12 LKYVVAVLTILLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I + ++ + + L S +I++ + L G Sbjct: 71 PTVILKNLTITEPGGDRTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 W + + +I V+ +++ + L ++NL + + + Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S V + + + ++ P + + + I I G+ Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGSPSVR 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297 + NL L+A+ L+ + + + + + Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLA--LRNNSIKIETVNGAFTAGGEYAQWDG 300 Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 S D K + N+ N +G+ ++ LN + E + + L + Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358 Query: 352 QYSVNKKEEKDNSHDKENQEN 372 Q +VN+ + + + Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379 >gi|325198791|gb|ADY94247.1| asmA family protein [Neisseria meningitidis G2136] Length = 704 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 119/381 (31%), Gaps = 23/381 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ + L L + +V + R ++ +KI+ I+ +LP Sbjct: 12 LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I + ++ + + L S +I++ + L G Sbjct: 71 PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 W + + +I V+ +++ + L ++NL + + + Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S V + + + ++ P + + + I I G+ Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGSPSVR 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297 + NL L+A+ L+ + + + + + Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPALA--LRNNSIKIETVNGAFTAGGEYAQWDG 300 Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 S D K + N+ N +G+ ++ LN + E + + L + Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358 Query: 352 QYSVNKKEEKDNSHDKENQEN 372 Q +VN+ + + + Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379 >gi|313202270|ref|YP_004040928.1| asma family protein [Methylovorus sp. MP688] gi|312441586|gb|ADQ85692.1| AsmA family protein [Methylovorus sp. MP688] Length = 896 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 119/361 (32%), Gaps = 18/361 (4%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEG 85 + D+++ + + + G IK+ P I I + + ++G Sbjct: 29 TFNPNDYKQTVINLVKEKKQRTLHLDGDIKLAFWPSIGADLGRISISEHNSDKEFAAVDG 88 Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH---NVILEKI 142 L + LPLL ++ V +Y+D N G +N+ S + ++ I Sbjct: 89 LKVSLALLPLLKKQLVVDTVYVDGVRANIVRYKDGTTNFDDLMSKDEEESEQIKFDIDGI 148 Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID--------SIKGSVIAEGT 194 +V + + D+ +D+ L NL+ L L+ D ++K SV +G Sbjct: 149 NVTNAALNVRDEMTDKQLALRKFNLKTGHVALGTPFDLASDFELEANNPAVKASVSIKGN 208 Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254 D ++ F + I L + D+ L E + A Sbjct: 209 VLADPEQQHFAVKGLDAGIKGDI---ATLKDADLTLSGDVDARLEHMELLVDSLKLALAA 265 Query: 255 GDFSKLLNLELSAKKSRLSGN-FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313 L + L A + R+ + ++ +S+ K IL D K + + Sbjct: 266 TQDGAKLKVALDAPQIRVQQDTVSGKQASINLSQEKGSDILTAKLVLADLKGSPKAVQSS 325 Query: 314 LLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENF 373 ++ N + H L T F + + +N +E Q +F Sbjct: 326 GISGEVNVKQGEHQLQST-FNSPFTGNLETQVFDLPKLVGKIN--VNDPALPKREMQGDF 382 Query: 374 S 374 + Sbjct: 383 A 383 >gi|116250539|ref|YP_766377.1| hypothetical protein RL0767 [Rhizobium leguminosarum bv. viciae 3841] gi|115255187|emb|CAK06261.1| conserved hypothetical exported protein [Rhizobium leguminosarum bv. viciae 3841] Length = 630 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 94/340 (27%), Gaps = 22/340 (6%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66 + L ++ + P I R E + G +KG + P P + Sbjct: 29 VFLLIALALFVALRVAAPYLISTGFVRSGIEDTLSKWTGYHAEIKGSPVLEFWPTPRITL 88 Query: 67 KDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124 I I Q IE LS + L G + ++ +P+L KG+ +W Sbjct: 89 NQITIRQPRESGDKLLGSIESLSADFSLIDALRGRTSFHEFHLVRPNLALTRDEKGLIDW 148 Query: 125 F---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 +D + + + V+ G + + D +S + Y + I Sbjct: 149 SYAGLLARAISGVRYENGAEVLDPDLDAEIGAVTVEDGTLVVTDIKSARTYHFDSVTADI 208 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 + L+ + + + AF + +L F Sbjct: 209 AWPRLSGAISAVVIARINGEDLKVDFASRQPLLAFAGRNAETRTSLTSNLLTAHFQGIAS 268 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 I + P + + +G + SA L + S +R + Sbjct: 269 IANLSTLSGNITASIPDVPALLTWSGKSIPGIATLKSA---SLESDIMSSGNGLRFNNLS 325 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 L +++ D + + + + Sbjct: 326 LSLNEASATGVMD--LFTQPGKRPKIGGTLAFDQMNLKPF 363 >gi|325204655|gb|ADZ00109.1| asmA family protein [Neisseria meningitidis M01-240355] Length = 704 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 52/384 (13%), Positives = 118/384 (30%), Gaps = 29/384 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ + L L + +V + R ++ +KI+ I+ +LP Sbjct: 12 LKYAVAVLTILLLAAVGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I + ++ + + L S +I++ + L G Sbjct: 71 PTVILKNLTITEPGGDRTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 W + + +I V+ +++ + L ++NL + + + Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S V + + + ++ P + + + I I G+ Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSNGIGPPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-RY 288 + NL L+A+ L +G F I R + Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLALRNNSIKIETVNGAFTIGGEYARWDGSF 302 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 KL +S ++S +F ++ LN + E + + L Sbjct: 303 KLDKANLHSGIANIGNAEISG------SFKTPRHQTNFSLNSPLVWTENKG-LEAPRLYV 355 Query: 349 DDIQYSVNKKEEKDNSHDKENQEN 372 +Q +VN+ + + + Sbjct: 356 STLQDTVNRLPQPRFISRLDGSLS 379 >gi|254671661|emb|CBA09399.1| hypothetical protein NME_2230 [Neisseria meningitidis alpha153] Length = 704 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 118/381 (30%), Gaps = 23/381 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ + L L + +V + R ++ +KI+ I+ +LP Sbjct: 12 LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I + ++ + + L S +I++ + L G Sbjct: 71 PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 W + + +I V+ +++ + L ++NL + + + Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S V + + + ++ P + + + I I G Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGTPAIR 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297 + NL L+A+ L+ + + + + + Sbjct: 243 FNAGGADTAGLGLRADTSFRNLHLTAQIPALA--LRNNSIKIETVNGAFTAGGEYAQWDG 300 Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 S D K + N+ N +G+ ++ LN + E + + L + Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358 Query: 352 QYSVNKKEEKDNSHDKENQEN 372 Q +VN+ + + + Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379 >gi|82703792|ref|YP_413358.1| hypothetical protein Nmul_A2679 [Nitrosospira multiformis ATCC 25196] gi|82411857|gb|ABB75966.1| Protein of unknown function DUF748 [Nitrosospira multiformis ATCC 25196] Length = 1065 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 47/378 (12%), Positives = 115/378 (30%), Gaps = 38/378 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61 RR LIGL +F+ +++ + F + E + ++ + + V+ I I P+ Sbjct: 15 RRFLIGL-SVFAGIIILFGLLSYFWLPGYAKAKLEEALSEVLHRPVTVQ---SIDIQPYT 70 Query: 62 PSVFFKDIRIDQK----EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 + + RI +K + + L + + + + + P + Sbjct: 71 LELTIRGFRIGEKETSVDADKNLFSFDELYLDLSIASIAHRAPVISSVSLKGPAMRLVRE 130 Query: 118 SKGVSNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 ++ N R+ + I ++ GR + +D +SD+ + Sbjct: 131 AQQQFNITDLIEDFMKRPREEEEGGKSMFSVRNIVIEDGRFEFVDHVKKSQQEISDIQIG 190 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 + + + V + + N+ +L+I+L + Sbjct: 191 VP------FIANFESAEETWVEPRFSAKVNGAPFNLTGKLRPFTTNREATLEIRLSDVDL 244 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 + + SG + ++ + L+G N + + Sbjct: 245 T---RIDEYSPIPVGIHLLSGYVD-SELLLTFTQVDGQSPALVLTG-------NAALKKL 293 Query: 289 KLQSILPNSSTDED-NKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347 K+++ + + V E NL + A L E E + K Sbjct: 294 KVENHSVEAPYAATLGEFNVQLTEINLNAVKSSRAAI--VLTEIAVTPEGSAEPTLSLPK 351 Query: 348 KDDIQYSVNKKEEKDNSH 365 + V+ +++ + Sbjct: 352 LALEEIVVDIRQKNVSLR 369 >gi|308389815|gb|ADO32135.1| hypothetical protein NMBB_1947 [Neisseria meningitidis alpha710] Length = 704 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 52/384 (13%), Positives = 118/384 (30%), Gaps = 29/384 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ V+ L L + +V + R ++ +KI+ I+ +LP Sbjct: 12 LKYVVAVLTILLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I + ++ + + L S +I++ + L G Sbjct: 71 PTVILKNLTITEPGGDRTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 W + + +I V+ +++ + L ++NL + + + Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S V + + + ++ P + + + I I G+ Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSNGIGPPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-RY 288 + NL L+A+ L +G F R + Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLALRNNSIKIETVNGAFTAGGEYARWDGSF 302 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 KL +S ++S +F ++ LN + E + + L Sbjct: 303 KLDKANLHSGIANIGNAEISG------SFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYV 355 Query: 349 DDIQYSVNKKEEKDNSHDKENQEN 372 +Q +VN+ + + + Sbjct: 356 STLQDTVNRLPQPRFISRLDGSLS 379 >gi|325128761|gb|EGC51624.1| asmA family protein [Neisseria meningitidis N1568] Length = 704 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 52/384 (13%), Positives = 118/384 (30%), Gaps = 29/384 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ + L L + +V + R ++ +KI+ I+ +LP Sbjct: 12 LKYAVAVLTILLLAAVGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I + ++ + + L S +I++ + L G Sbjct: 71 PTVILKNLTITEPGGDRTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 W + + +I V+ +++ + L ++NL + + + Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S V + + + ++ P + + + I I G+ Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSNGIGPPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-RY 288 + NL L+A+ L +G F I R + Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLALRNNSIKIETVNGAFTIGGEYARWDGSF 302 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 KL +S ++S +F ++ LN + E + + L Sbjct: 303 KLDKANLHSGIANIGNAEISG------SFKTPRHQTNFSLNSPLVWTENKG-LEAPRLYV 355 Query: 349 DDIQYSVNKKEEKDNSHDKENQEN 372 +Q +VN+ + + + Sbjct: 356 STLQDTVNRLPQPRFISRLDGSLS 379 >gi|254000313|ref|YP_003052376.1| AsmA family protein [Methylovorus sp. SIP3-4] gi|253986992|gb|ACT51849.1| AsmA family protein [Methylovorus sp. SIP3-4] Length = 896 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 37/370 (10%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEG 85 + D+++ + + + G IK+ P I I + + ++G Sbjct: 29 TFNPNDYKQTVINLVKEKKQRTLHLDGDIKLAFWPSIGADLGRISISEHNSDKEFAAVDG 88 Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH---NVILEKI 142 L + LPLL ++ V +Y+D N G +N+ S + ++ I Sbjct: 89 LKVSLALLPLLKKQLVVDTVYVDGVRANIVRYKDGTTNFDDLMSKDEEESEQIKFDIDGI 148 Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID--------SIKGSVIAEGT 194 +V + + D+ +D+ L NL+ L L+ D ++K SV +G Sbjct: 149 NVTNAALNVRDEMTDKQLALRKFNLKTGHVALGTPFDLASDFELEANNPAVKASVSIKGN 208 Query: 195 GNFDNKRSAFKIT----------ANFPAKNKAISLKIQLFPLAYPIIID-LFGNLFWNEK 243 D ++ F + A + +S + +++D L L + Sbjct: 209 VLADPEQQHFAVKGLDAGIKGDIATLKDADLTLSGDVDARLEHMELLVDSLKLALAATQD 268 Query: 244 QPIYSGVFSV--------------AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 A + + + K S V+ S Sbjct: 269 GAKLKVALDAPQIRVQQDTVSGKQASINLSQEKGSDTLSAKLVLADLKGSPKAVQSSGIS 328 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLN-FSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 + + + F ++N+ + E + + L Sbjct: 329 GEVNVKQGEHQLQSTFNSPFTGNLETQVFDLPKLVGKINVNDPALPKREMQGDFAFKLHA 388 Query: 349 DDIQYSVNKK 358 D Q VN Sbjct: 389 DAKQQLVNSD 398 >gi|241203165|ref|YP_002974261.1| AsmA family protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857055|gb|ACS54722.1| AsmA family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 630 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 94/340 (27%), Gaps = 22/340 (6%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66 + L ++ + P I R E + G +KG + P P + Sbjct: 29 VFLLIALALFVALRVAAPYLISTGFVRSGIEDALSKWTGYHAEIKGSPVLEFWPTPRITL 88 Query: 67 KDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124 I I Q IE LS + L G + ++ +P+L KG+ +W Sbjct: 89 NQITIRQPRESGDKLLGSIESLSADFSLIDALRGRTSFHEFHLVRPNLALTRDEKGLIDW 148 Query: 125 F---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 +D + + + V+ G + + D +S + Y + I Sbjct: 149 SYAGLLARAISGVRYENGAEVLDPDLDAEIGAVTVEDGTLVVTDIKSAKTYHFDSVTADI 208 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 + L+ + + + AF + +L F Sbjct: 209 AWPRLSGAISSVVIARINGQDLKVDFASRQPLLAFAGRNAETRTSLTSNLLTAHFQGIAS 268 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 I + P + + +G + SA L + S +R + Sbjct: 269 IANLSALSGNVTATIPDVPALLTWSGKSIPGIATLKSA---SLESDIMSSGNGLRFNNLS 325 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 L +++ D + + + + Sbjct: 326 LSLNEASATGVMD--LFTQPGKRPKIGGTLAFDQMNLKPF 363 >gi|221210311|ref|ZP_03583291.1| conserved hypothetical protein [Burkholderia multivorans CGD1] gi|221169267|gb|EEE01734.1| conserved hypothetical protein [Burkholderia multivorans CGD1] Length = 1254 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 100/334 (29%), Gaps = 42/334 (12%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65 IGLG L +VL G F R E+Q +G+ ++ +I + P+ ++ Sbjct: 28 IGLGILIFLVLFGLLG--FFAAPPLIRHVAEQQLGEQLGRPATIR---RIALNPYTLNLE 82 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 DI + ++ I L +R + L G V ++ +D P N+ Sbjct: 83 ADDIHVGERGGQGDFVDIGKLVVRPSWSSLFRGAPIVNEVRLDSPRFRIVRYDAQRFNFT 142 Query: 126 Q-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + I + GGRI D+ ++ + + D L + Sbjct: 143 DLIEKFSTPSKPDSKPTPFSVSNIQINGGRIDFDDRLLNEKHVVDDWTLGVP------YI 196 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID----- 233 V + FD A A+++ + ++ L P +I Sbjct: 197 ATLPSKTDIFVEPKLRMRFDGSPIAIDGKTKPFAQSRESEIALKFDRLDVPKLISYVPAK 256 Query: 234 LFGNLFWNEKQPIYSGVFSVAG----------DFSKLLNLELSAKKSRLSGN-------- 275 L + S F ++G + A + + Sbjct: 257 LPVAVTSGLLSSDLSVNFVMSGDTPALRVSGTVDLTDAKVTGPASEPLFAARGVHVAAAG 316 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + + +L + + S D+ V + Sbjct: 317 LEPLRNAMHFDEIRLDRPVIDLSRDKQGVLNVEK 350 Score = 54.9 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 43/346 (12%), Positives = 100/346 (28%), Gaps = 49/346 (14%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 +V D ++ G+ + A L L + ++ +D+P ++ +GV Sbjct: 288 TVDLTDAKVTGPA-SEPLFAARGVHVAAAGLEPLRNAMHFDEIRLDRPVIDLSRDKQGVL 346 Query: 123 NWF--------------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQES 156 N Q T ++ + + + GG + + D+ Sbjct: 347 NVEKLAGSPAAAPKPASAAAASAPAASGAQAADTKTPPLDLTIRHVAIDGGTVNLDDRVP 406 Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA-FKITANFPAKNK 215 LS + + L +++ A+ T + R K + K Sbjct: 407 ATPTALS---------LTKLAATLDGFALQRKTPAKYTLSTSLSRGGDLKAEGSVDVAAK 457 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA-GDFSKLLNLELSAKKSRLSG 274 + K+ + LA + L L + + G + L A+ + Sbjct: 458 QVDTKLVVDALAL---VPLQPYLGEATRARVLDGALGATINAKADWGKTPLDAQVA--DS 512 Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD------L 328 + + K +I+ + + K V+ + + +G + Sbjct: 513 ELSLKSLKLATPDAKAPAIVLPDARAKIAKVDVAARTAEIASVDAHGLALDVKRLKNGNI 572 Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374 + F + + + + + D + KE NF+ Sbjct: 573 DLAAFASPAQPAVPQRTVARKAQAAAPSWHYRIDALNVKEASANFT 618 >gi|126739933|ref|ZP_01755624.1| AsmA family protein [Roseobacter sp. SK209-2-6] gi|126719165|gb|EBA15876.1| AsmA family protein [Roseobacter sp. SK209-2-6] Length = 648 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 42/340 (12%), Positives = 95/340 (27%), Gaps = 26/340 (7%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 R L+ L + +V+ + + Q G+K++ G +K I P Sbjct: 2 RFLLRLLSVVVIVISLMLGLLFVLPGEKVAALAAAQIEAQTGRKLSFGGKVKFTIWPVLG 61 Query: 64 VFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + + + + + LS+ LL G++RV ++ P LN G+ Sbjct: 62 IKSDGVSLSNADWAGPEPMLTAQRLSIGISASDLLRGKLRVTEVSALLPRLNLSEREDGL 121 Query: 122 SNW-------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 NW + D + V +EK+ + G ++ + +++ Sbjct: 122 GNWVLTTEGESGGNPEAVPEENKDAVLPVAIEKLTLTGAALRY-QPREGAAIEMRSIDMS 180 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 + + + + N + F + S+ + + Sbjct: 181 LKWPDPSGTVNMDLVLRPAGEP----VNIAAEIGTFSRFLAGDVVSMGASVDATGGFMRF 236 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK-SRLSGNFKI-SDGNVRIS 286 DL G ++ + L + L + +DG + + Sbjct: 237 DGRADLNGAATGRMTAKTSDTARFLSILGLSDVALPAGLGQSITLGADMTYTTDGRLALR 296 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 L + ++ E N + Sbjct: 297 DMALDL----DGNQLEGALDLATTEPLQFTVQLNADDLDF 332 >gi|126725178|ref|ZP_01741021.1| hypothetical protein RB2150_15121 [Rhodobacterales bacterium HTCC2150] gi|126706342|gb|EBA05432.1| hypothetical protein RB2150_15121 [Rhodobacterales bacterium HTCC2150] Length = 650 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 93/317 (29%), Gaps = 26/317 (8%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIEG 85 E Q G+ + + G I P V DIRID + + Sbjct: 16 PSDRIARVVENQFQQATGRSMHIGGKISPTFFPSMGVNATDIRIDNADWAGTEPMVTAQN 75 Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI----------- 134 L++ L G+I V + + P + +++ G +NW T Sbjct: 76 LAVNVSTLDFFRGKITVQGIDLKSPIIRLQVATDGRANWDFSNGTESSTNDNAVETGGGA 135 Query: 135 --HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE 192 ++K + + D Q Y +S LN + + + + +D Sbjct: 136 TVPKFTIDKGEISNAHLIYDDAAGGQFYDISSLNALLQLPDFDGEAQIDVDGEMNDQSFA 195 Query: 193 GTGNFDNKRSAFKITANFPAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 G + + N A S+ ++ P+ D+ + E +++ Sbjct: 196 IKGTLAEFSTFLAGKLTPVSLNVGVGANSVSVEGNLGHAPLAADMKIDADVPELSAVFAL 255 Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + VA +K + G+ K + R ++ + + + Sbjct: 256 INQVAP-----KLPLGFGQKIAVKGDLKYTPDGAVYLR---ETEIILDQNSLNADVDLFL 307 Query: 310 DEENLLNFSENGAESMH 326 ++ L + Sbjct: 308 TDKPKLRALVSADTLDF 324 >gi|15677541|ref|NP_274697.1| hypothetical protein NMB1693 [Neisseria meningitidis MC58] gi|7226948|gb|AAF42041.1| hypothetical protein NMB1693 [Neisseria meningitidis MC58] gi|316984841|gb|EFV63798.1| asmA family protein [Neisseria meningitidis H44/76] gi|325134773|gb|EGC57410.1| asmA family protein [Neisseria meningitidis M13399] gi|325138714|gb|EGC61266.1| asmA family protein [Neisseria meningitidis ES14902] gi|325140844|gb|EGC63354.1| asmA family protein [Neisseria meningitidis CU385] gi|325199713|gb|ADY95168.1| asmA family protein [Neisseria meningitidis H44/76] Length = 704 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 51/384 (13%), Positives = 117/384 (30%), Gaps = 29/384 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ + L L + +V + R ++ +KI+ I+ +LP Sbjct: 12 LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I + ++ + + L S +I++ + L G Sbjct: 71 PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 W + + +I V+ +++ + L ++NL + + + Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S V + + + ++ P + + + I I G+ Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSNGIGPPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-RY 288 + NL L+A+ L +G F R + Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPALALRNNSIKIETVNGAFTAGGEYARWDGSF 302 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 KL +S ++S +F ++ LN + E + + L Sbjct: 303 KLDKANLHSGIANIGNAEISG------SFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYV 355 Query: 349 DDIQYSVNKKEEKDNSHDKENQEN 372 +Q +VN+ + + + Sbjct: 356 STLQDTVNRLPQPRFISRLDGSLS 379 >gi|325145116|gb|EGC67399.1| asmA family protein [Neisseria meningitidis M01-240013] Length = 704 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 51/384 (13%), Positives = 117/384 (30%), Gaps = 29/384 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ + L L + +V + R ++ +KI+ I+ +LP Sbjct: 12 LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I + ++ + + L S +I++ + L G Sbjct: 71 PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 W + + +I V+ +++ + L ++NL + + + Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S V + + + ++ P + + + I I G+ Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSNGIGPPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-RY 288 + NL L+A+ L +G F R + Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPALALRNNSIKIETVNGAFTAGGEYARWDGSF 302 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 KL +S ++S +F ++ LN + E + + L Sbjct: 303 KLDKANLHSGIANIGNAEISG------SFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYV 355 Query: 349 DDIQYSVNKKEEKDNSHDKENQEN 372 +Q +VN+ + + + Sbjct: 356 STLQDTVNRLPQPRFISRLDGSLS 379 >gi|325201650|gb|ADY97104.1| asmA family protein [Neisseria meningitidis M01-240149] gi|325208615|gb|ADZ04067.1| asmA family protein [Neisseria meningitidis NZ-05/33] Length = 704 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 119/381 (31%), Gaps = 23/381 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ + L L + +V + R ++ +KI+ I+ +LP Sbjct: 12 LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I + ++ + + L S +I++ + L G Sbjct: 71 PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 W + + +I V+ +++ + L ++NL + + + Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S V + + + ++ P + + + I I G+ Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGSPSVR 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297 + NL L+A+ L+ + + + + + Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLA--LRNNSIKIETVNGAFTAGGEYAQWDG 300 Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 S D K + N+ N +G+ ++ LN + E + + L + Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358 Query: 352 QYSVNKKEEKDNSHDKENQEN 372 Q +VN+ + + + Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379 >gi|325132811|gb|EGC55491.1| asmA family protein [Neisseria meningitidis M6190] Length = 704 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 119/381 (31%), Gaps = 23/381 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ + L L + +V + R ++ +KI+ I+ +LP Sbjct: 12 LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I + ++ + + L S +I++ + L G Sbjct: 71 PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 W + + +I V+ +++ + L ++NL + + + Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S V + + + ++ P + + + I I G+ Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGSPSVR 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297 + NL L+A+ L+ + + + + + Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLA--LRNNSIKIETVNGAFTAGGEYAQWDG 300 Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 S D K + N+ N +G+ ++ LN + E + + L + Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358 Query: 352 QYSVNKKEEKDNSHDKENQEN 372 Q +VN+ + + + Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379 >gi|325205590|gb|ADZ01043.1| asmA family protein [Neisseria meningitidis M04-240196] Length = 704 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 119/381 (31%), Gaps = 23/381 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ + L L + +V + R ++ +KI+ I+ +LP Sbjct: 12 LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I + ++ + + L S +I++ + L G Sbjct: 71 PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 W + + +I V+ +++ + L ++NL + + + Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S V + + + ++ P + + + I I G+ Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGSPSVR 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297 + NL L+A+ L+ + + + + + Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLA--LRNNSIKIETVNGAFTAGGEYAQWDG 300 Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 S D K + N+ N +G+ ++ LN + E + + L + Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358 Query: 352 QYSVNKKEEKDNSHDKENQEN 372 Q +VN+ + + + Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379 >gi|330821927|ref|YP_004350789.1| hypothetical protein bgla_2g28610 [Burkholderia gladioli BSR3] gi|327373922|gb|AEA65277.1| hypothetical protein bgla_2g28610 [Burkholderia gladioli BSR3] Length = 1340 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 97/340 (28%), Gaps = 47/340 (13%) Query: 3 RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 RRV +G+ V L+G F P I R E+Q + + + + +I + P+ Sbjct: 30 RRVALGILIFLVVFGLLGFFAAPPLI-----RHIAEQQLSRQLDRPATIA---RIALNPY 81 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I ++ I L++R + LL G V ++ ID P + Sbjct: 82 TLRLEADGVHIGERGGQGPFVDIGKLTVRPAWSSLLRGAPIVDEVRIDAPRFHIVRYDAQ 141 Query: 121 VSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 N+ + + + I V GRI D+ + + L + Sbjct: 142 RFNFTDLIEKFSKPSQPSSSGPTRFSVSNIQVTDGRIDFDDRLLGARHVVDQWTLGVPFV 201 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 V D A ++ + + ++ L P ++ Sbjct: 202 ATLPSKTDIF------VQPTLKLRLDGSPIAITGKTKPFSQTRESEINLKFDGLDVPKLL 255 Query: 233 D--------------------LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 L ++ SG +A + Sbjct: 256 SYAPARLPVQMSSGRLSSDLVLRFSIDGETPALRVSGTVDLADANLSDAANHPLFAARAV 315 Query: 273 ---SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 +G+ + + ++ + + + D V + Sbjct: 316 HVAAGSLEPLRQVLHFDEIRVDAPVLTLTRDAAGVLNVQK 355 >gi|319410946|emb|CBY91341.1| putative AsmA-like protein [Neisseria meningitidis WUE 2594] Length = 704 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 51/384 (13%), Positives = 117/384 (30%), Gaps = 29/384 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ + L L + +V + R ++ +KI+ I+ +LP Sbjct: 12 LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-ARTHRKISFDADIQRRLLPR 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I + ++ + + L S +I++ + L G Sbjct: 71 PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 W + + +I V+ +++ + L ++NL + + + Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S V + + + ++ P + + + I I G+ Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSNGIGPPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-RY 288 + NL L+A+ L +G F R + Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLALRNNSIKIETVNGAFTAGGEYARWDGSF 302 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 KL +S ++S +F ++ LN + E + + L Sbjct: 303 KLDKANLHSGIANIGNAEISG------SFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYV 355 Query: 349 DDIQYSVNKKEEKDNSHDKENQEN 372 +Q +VN+ + + + Sbjct: 356 STLQDTVNRLPQPRFISRLDGSLS 379 >gi|170692371|ref|ZP_02883534.1| AsmA family protein [Burkholderia graminis C4D1M] gi|170142801|gb|EDT10966.1| AsmA family protein [Burkholderia graminis C4D1M] Length = 884 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 98/324 (30%), Gaps = 32/324 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDI 69 L DW R + T +G++ + G +K+ +P+P +I Sbjct: 31 VFILTFDWNRARPYVNDKVTQAIGRQFTINGDLKVGLRRPVGETGLKSWVPWPRFSAANI 90 Query: 70 RIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ- 126 I + + ++ + + + LPLL+ +I + + + P ++ G +NW Sbjct: 91 TIANPDWAKRPQFATLDEIDFQVKVLPLLAHDIVIPAINLVNPSVDLERMLDGRNNWTFE 150 Query: 127 -RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF---------LSDLNLQISARFLNI 176 KS + L I G I + DQ+ + + Sbjct: 151 LPKSKTPSQWKLQLHDIVFAKGNIALSDQQKKVDAQMVVDTLGQPIPIGEAMKQQEEASR 210 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL-- 234 + G+ + +A +A A + A L Sbjct: 211 KASAEAVGKDGAKKLSAQADAQAASAASAASAAAARGASATDVHASGTTAATGASGGLVA 270 Query: 235 ---FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 G + SG + + ++ + +G + SD N ++ Sbjct: 271 GGSKGASATASARSGASGAVGTSAATPS--DARGASTANGANGANRASDANGTSGTHEAN 328 Query: 292 SILPNSSTDEDNKTKVSQDEENLL 315 S+T+ + +++ + L Sbjct: 329 GANEASNTNPASAANTARNGKPDL 352 >gi|296114596|ref|ZP_06833249.1| AsmA family protein [Gluconacetobacter hansenii ATCC 23769] gi|295978952|gb|EFG85677.1| AsmA family protein [Gluconacetobacter hansenii ATCC 23769] Length = 801 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 52/384 (13%), Positives = 98/384 (25%), Gaps = 65/384 (16%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDI 69 L + V + + W F ER+A + +K+ + + +H V D+ Sbjct: 48 AILAGSLCVAVLALVILWSWDWFIPLVERRAGAAIHRKVTIA-HLHVHPGRVIRVGADDV 106 Query: 70 RIDQKEDG---SFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 RI+Q + L + + PLL G + + + +D P + + G +N+ Sbjct: 107 RIEQPAGFDDLPPFATARRLDVSIRWWPLLWGGGLDLPLIALDTPVVEIRERADGSTNYD 166 Query: 126 --------------------------------------------QRKSTMDMIHNVILEK 141 + M Sbjct: 167 FSAPDIKPDPGTKGTKTPDAASAAVKATGTTGTSKADGATSTTTAQPDAMTGGGTPSKGA 226 Query: 142 IHVKGG------RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195 G RI I + Q++ + + P + + V A+GT Sbjct: 227 SATTDGDATTIPRIGAIRIANGQLHVVHAGLHTDMRGAVRTTDPANGQDARLLVDAQGTY 286 Query: 196 NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255 F +N+ + L + L G + S+AG Sbjct: 287 VRQAITGHFSGGTLVSLQNRTQPYPVDLDIRHGATRLTLRGTIDDPLTLAGARLRLSLAG 346 Query: 256 DFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD 310 LL R+ GN S ++R + + Sbjct: 347 PDMSLLYPLTGVVIPQTPPYRVVGNLDYSAAHIRFRDLDGHVGSSD----LGGNLSIDPH 402 Query: 311 EENLLNFSENGAESMHDLNETDFF 334 + + DL + F Sbjct: 403 QAVPF-VDADLHSRRVDLADLGGF 425 >gi|304386827|ref|ZP_07369091.1| AsmA family protein [Neisseria meningitidis ATCC 13091] gi|304339081|gb|EFM05171.1| AsmA family protein [Neisseria meningitidis ATCC 13091] Length = 704 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 119/381 (31%), Gaps = 23/381 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ + L L + +V + R ++ +KI+ I+ +LP Sbjct: 12 LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I + ++ + + L S +I++ + L G Sbjct: 71 PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 W + + +I V+ +++ + L ++NL + + + Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S V + + + ++ P + + + I I G+ Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSNGIGPPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297 + NL L+A+ L+ + + + + + Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLA--LRNNSIKIETVNGAFTAGGEYAQWDG 300 Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 S D K + N+ N +G+ ++ LN + E + + L + Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358 Query: 352 QYSVNKKEEKDNSHDKENQEN 372 Q +VN+ + + + Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379 >gi|206564518|ref|YP_002235281.1| hypothetical protein BCAM2680 [Burkholderia cenocepacia J2315] gi|198040558|emb|CAR56544.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 1274 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 102/340 (30%), Gaps = 47/340 (13%) Query: 3 RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 RR+ IG+ + L+G F P I R E+Q + + + ++ +I + P+ Sbjct: 26 RRIGIGVLIFVVLFGLLGFFAAPPLI-----RHVAEQQLSKQLDRPATIQ---RIALNPY 77 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 ++ I + ++ I L +R + L G V ++ +D P + Sbjct: 78 TLNLEADGIHLGERGGQGDFIDIGKLVVRPSWSSLFRGAPIVNEVRLDSPRFHIVRYDAQ 137 Query: 121 VSNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 N+ + I V GRI D+ ++ + + + L I Sbjct: 138 RFNFTDLIEKFSSPTPKPDSKPTQFSVSNIQVNDGRIDFDDRLLNEKHVVDNWTLGIP-- 195 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 V + FD + A+++ + ++ L P +I Sbjct: 196 ----YIATLASKTDIFVEPKLRARFDGSPISIDGKTKPFAQSRESEIALKFDRLDVPKLI 251 Query: 233 D--------------LFGNLFWNEKQPIYSGVFSVAG-DFSKLLNLELSAKKSRLSGN-- 275 L NL N + V+G + A + Sbjct: 252 SYVPAKLPVAVTSGLLSSNLTVNFVMSGETPALRVSGTVDLNDAKVTDRASAPLFAARGV 311 Query: 276 ------FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + + +L + + S D+ V + Sbjct: 312 HVAAAGLEPLRNAMHFDEIRLDQPVIDLSRDKQGVLNVEK 351 Score = 42.2 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 35/312 (11%), Positives = 86/312 (27%), Gaps = 63/312 (20%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 +V D ++ + G+ + A L L + ++ +DQP ++ +GV Sbjct: 289 TVDLNDAKVTDRASA-PLFAARGVHVAAAGLEPLRNAMHFDEIRLDQPVIDLSRDKQGVL 347 Query: 123 NWFQRKSTM--------------------------------------------DMIHNVI 138 N + + ++ Sbjct: 348 NVEKLVAQPAAAPKVEAGAGKPAASAVAAASGASGAVAAASGAKAERSAAAKEAPPLDLT 407 Query: 139 LEKIHVKGGRIKIID--QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196 + + + GG I + D + L+ L + L +P ++ S+ G Sbjct: 408 IRHVAIDGGTINVDDRVPATPTAMSLTKLAATLDGFSLQGKTPAKY-TLSTSLSRGGDVT 466 Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF-SVAG 255 + + A+ A++L L L + + G + Sbjct: 467 AEGAFNLAAKQADTKLTVAALALPA------------LQPYLGEATRARVLDGTLGATVN 514 Query: 256 DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315 + L+A+ + + + K +I+ ++ + K V+ + Sbjct: 515 AKTDWGKTPLAAEVA--DSTVSLKSLKIAAPDNKAPAIVLPDASAKIAKVDVAARTAEIA 572 Query: 316 NFSENGAESMHD 327 + +G Sbjct: 573 SVDASGLALDVK 584 >gi|317153118|ref|YP_004121166.1| AsmA family protein [Desulfovibrio aespoeensis Aspo-2] gi|316943369|gb|ADU62420.1| AsmA family protein [Desulfovibrio aespoeensis Aspo-2] Length = 1051 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 53/386 (13%), Positives = 114/386 (29%), Gaps = 63/386 (16%) Query: 1 MLRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 M+RR + L V G F ++D FR A +VG+ + + G + I Sbjct: 1 MIRRVGVFLFEVLVACVLAVTAGLFWASHYVDSEGFRLRLTALAEEMVGRPVTLNGEVDI 60 Query: 57 HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 + P PS+ + + + ++I+ L + LPL SG + + + + + Sbjct: 61 ALYPMPSLEISGLAVADDPEFGSAPLAEIDTLYVSVRLLPLFSGRVEIPSLLVHGMRAHV 120 Query: 115 YLSSKGVSNWFQ-----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 S G NW + I V ++++ V + D++ + LS Sbjct: 121 VRSKLGAINWAMLLDTERTRDFSSVDSAFGIETVFIDEVEVVEASVTYTDRKDGVQFALS 180 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVI--AEGTGNFDNKRSAFKITANFPAKNKAISLKI 221 + L+ P + S + A + + F K+ ++S + Sbjct: 181 GITLRTGGVHAGQRVPFVVSSSFSWDDGGIKSQLILKGMIQADEDWSGFTLKDASVSGTV 240 Query: 222 QLFPLAYPII---------IDLF-GNLFWNEKQPIYSGVFSVAGDFSKLLNLE------- 264 L +D+ G + + + + G+ + S L Sbjct: 241 GGRFLPRGASPGEMVARLVVDMDKGTVGLDGLRIRFLGMLAEGSLQSGDLGSAPGVTGRI 300 Query: 265 -----------------------LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 +++ + + I V ++ Sbjct: 301 EVQPFVPATVISRYYPNIPVAKVDGLRRAAFAASLAIDGKGVSLTDMTATL----DDLTL 356 Query: 302 DNKTKVSQDEENLLNFSENGAESMHD 327 + + + F +G D Sbjct: 357 RGHAGLKGFDAHRYEFDLHGDTLDLD 382 >gi|157962230|ref|YP_001502264.1| AsmA family protein [Shewanella pealeana ATCC 700345] gi|157847230|gb|ABV87729.1| AsmA family protein [Shewanella pealeana ATCC 700345] Length = 612 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 112/357 (31%), Gaps = 36/357 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + L +VL V + D DF+ G+++A+ + P Sbjct: 1 MKFLKWFFITLLGLVLALVLYVTVIFDPNDFKPQIVELVKKQTGRELAIGSDLSWTFFPS 60 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + I + E + + +PLL E+ + + +D L Sbjct: 61 LGIELGKITLSNPEGFKNASMVSVNQVVAEVALMPLLKKEVEISQLNLDGLTLMLETQKD 120 Query: 120 GVSNWFQRKSTMD-----------------MIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 G +++ D + + + I + +I ID S Sbjct: 121 GRNSFDGLAGNADKKSVSKGATQNTASSHATLARLDIGGIAITNTQITNIDHLSQSEQVF 180 Query: 163 SDLNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218 + L + L +PL + +V ++G G + IT N N ++ Sbjct: 181 ALKELTLGRFQLGEFAPLKYEFAATMPDMAVTSQGEGQIKVAQDLQTITINDFVVNNQVT 240 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA----KKSRLSG 274 + + DL +L + S V S + N +L K ++ Sbjct: 241 GE---GIPNGSLKADLTTSLVVALDKQTLSLVLSSFSAANINANGKLDIAYGSKVPQVVA 297 Query: 275 NFKISDGNVR--ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 ++ D ++ + +++ ++ + D K S+ E L D++ Sbjct: 298 KLEVGDVDLDALLPKHEGEAAKQDKPKD-KPTAKPSKAIEPDLTAM---KSVNLDVD 350 >gi|163734117|ref|ZP_02141558.1| AsmA family protein [Roseobacter litoralis Och 149] gi|161392653|gb|EDQ16981.1| AsmA family protein [Roseobacter litoralis Och 149] Length = 650 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 37/371 (9%), Positives = 102/371 (27%), Gaps = 42/371 (11%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIEGLS 87 Q ++ G+ +A+ G + + P V D+ + + + Sbjct: 28 DRLARIATEQLSVATGRDVAINGDVALTFWPVLGVSADDLEVSNAGWADQGPMLQAANAA 87 Query: 88 MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMD--------------- 132 + + + LL G+IR+ ++ P + G ++W + Sbjct: 88 IGIDVMALLRGDIRITNVEAHSPTIRLEQRLDGRASWEFTNAEDSAQIKTTTEAKTDQSE 147 Query: 133 ----MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188 ++ +E++ V + D E + L+ ++L + + +S + Sbjct: 148 TVAAESRSISIERLSVTDATLIY-DAEGSDLVTLAGVDLALDWPDPAGPAEISATVRPAN 206 Query: 189 VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248 V + + +K+ + A + ++ + ++ Sbjct: 207 VPVSIDAEIEGF--------GDFITGETRGVKVTVAAPAGQMSLNGRAS-TAGAVAGAFA 257 Query: 249 GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS--RYKLQSILPN-SSTDEDNKT 305 F L L A +L ++ + L+ + + Sbjct: 258 FKTDNTEAFLAALGLPGVALPPKLGQQIDVAADITLTPDRQLALRGLALDLHGNRLSGAA 317 Query: 306 KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSH 365 +S + +N + ++ + + + Sbjct: 318 DISLNGIPTVNVQLAAGDLDLTPAQSA--------PRTSGSSGGQGGAETTSEGWSKSPI 369 Query: 366 DKENQENFSGD 376 D +F+GD Sbjct: 370 DASALASFNGD 380 >gi|261392082|emb|CAX49579.1| putative AsmA-like protein [Neisseria meningitidis 8013] Length = 704 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 118/381 (30%), Gaps = 23/381 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ + L L + +V + R ++ +KI+ I+ +LP Sbjct: 12 LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I + ++ + + L S +I++ + L G Sbjct: 71 PTVILKNLTITEPGGDRTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 W + + +I V+ +++ + L ++NL + + + Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S V + + + ++ P + + + I I G Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGTPAIR 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297 + NL L+A+ L+ + + + + + Sbjct: 243 FNAGGADTAGLGLRADTSFRNLHLTAQIPALA--LRNNSIKIETVNGAFTAGGEYAQWDG 300 Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 S D K + N+ N +G+ ++ LN + E + + L + Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358 Query: 352 QYSVNKKEEKDNSHDKENQEN 372 Q +VN+ + + + Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379 >gi|325142877|gb|EGC65244.1| asmA family protein [Neisseria meningitidis 961-5945] Length = 704 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 48/381 (12%), Positives = 118/381 (30%), Gaps = 23/381 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ + L L + +V + R ++ +KI+ I+ +LP Sbjct: 12 LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I + ++ + + L S +I++ + L G Sbjct: 71 PTVILKNLTITEPGGDRTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 W + + +I V+ +++ + L ++NL + + + Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S V + + + ++ P + + + I I G+ Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGSPSVR 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297 + NL L+A+ L+ + + + + + Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLA--LRNNSIKIETVNGAFTAGGEYAQWDG 300 Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 S D K + N+ N +G+ ++ N + E + + L + Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSFNSPLVWTENKGLDA-PRLYVSTL 358 Query: 352 QYSVNKKEEKDNSHDKENQEN 372 Q +VN+ + + + Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379 >gi|94265338|ref|ZP_01289093.1| Uncharacterized protein involved in outer membrane biogenesis-like [delta proteobacterium MLMS-1] gi|93454148|gb|EAT04475.1| Uncharacterized protein involved in outer membrane biogenesis-like [delta proteobacterium MLMS-1] Length = 481 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 43/291 (14%), Positives = 101/291 (34%), Gaps = 13/291 (4%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 + R L+ LF ++ + + + + ER A +G ++ + G + + LP Sbjct: 6 IRRTWLVATVGLFIIIALILAALLAALQSDAAKARLERTAADALGMEVKIGGRLGLAFLP 65 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 +V D+R+ + ++ + E + + LPLL E+R+ + ++ + +G Sbjct: 66 DLAVTLHDVRLGEHDN--ELAWAERVRLGVGLLPLLRREVRIKQLTVENSRITIQRDPEG 123 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-------VYFLSDLNLQISARF 173 N+ + + + L I + ++ +DQ+S + + +L L + Sbjct: 124 RFNFQSPAPNGESLAALELPTIFLTAATLRYVDQQSGEQFAAEGCQLTVPELRLAEGEKS 183 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 + + + I D+ + + L ++LF + Sbjct: 184 ALLENLTVRAELNCQTIRRDELRLDDLQLSVVGREGRFEVE---PLGLELFGARGEGALL 240 Query: 234 LFGNLFWNEKQPIYSG-VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 + Y F VA F L E++ L+ + + Sbjct: 241 ADFTGPAPNYEIRYFLPQFQVADFFQVLTQEEIATGTMDLTVELAMQGETM 291 >gi|309781032|ref|ZP_07675770.1| membrane protein [Ralstonia sp. 5_7_47FAA] gi|308920098|gb|EFP65757.1| membrane protein [Ralstonia sp. 5_7_47FAA] Length = 1266 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 104/333 (31%), Gaps = 35/333 (10%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65 IG+G L +V+ G F R + Q + ++ + ++V KI I P+ + Sbjct: 52 IGIGVLVFLVVFGLLGA--FGGPPLLRHVAQTQLSKLLERPVSVG---KISINPYTLRLD 106 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 + +++ + + L M A + + + ++ ID PH+ +++ N+ Sbjct: 107 VDQFHVTERDGKTPFVDVGHLHMNASWSSIFRRAPVIEELSIDAPHVRIVRTAEQRFNFS 166 Query: 126 -----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 K + + + + G I DQ + + L + + Sbjct: 167 DIVDKLSQPETAPKPKSNEPARFVFANLQLTNGAIDFADQPLGAQHKVDGLQIGVPFL-- 224 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 P +D ++A D F A++ +L I++ L P + Sbjct: 225 -ASLPADVDIFVQPLLA---ARIDGAPLHFAGKTKPFAESLESNLNIKIDGLDLPRYL-- 278 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 G + + G + + + A R+ G + V Sbjct: 279 -GYVPGPLPVAVPQGKLTTD-LTIEFQKPKSGAPVLRVHGTTGLDHLEV--------VDA 328 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + + + + L+ D Sbjct: 329 RKAPLVAAKQVRATLADVRPLDNVFRLDALTLD 361 >gi|241662450|ref|YP_002980810.1| hypothetical protein Rpic12D_0837 [Ralstonia pickettii 12D] gi|240864477|gb|ACS62138.1| protein of unknown function DUF748 [Ralstonia pickettii 12D] Length = 1266 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 104/333 (31%), Gaps = 35/333 (10%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65 IG+G L +V+ G F R + Q + ++ + ++V KI I P+ + Sbjct: 52 IGIGVLVFLVVFGLLGA--FGGPPLLRHVAQTQLSKLLERPVSVG---KISINPYTLRLD 106 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 + +++ + + L M A + + + ++ ID PH+ +++ N+ Sbjct: 107 VDQFHVTERDGKTPFVDVGHLHMNASWSSIFRRAPVIEELSIDAPHVRIVRTAEQRFNFS 166 Query: 126 -----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 K + + + + G I +DQ + + L + + Sbjct: 167 DIVDRLSQPENPPKPKSNEPARFVFANLQLANGAIDFVDQPLGTQHKVDGLQIGVPFL-- 224 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 P +D ++A D F A + +L +++ L P + Sbjct: 225 -ASLPADVDIFVQPLLA---ARIDGAPLHFAGKTKPFADSLESNLNVKIDGLDLPRYL-- 278 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 G + + G + + A R+ G + + V Sbjct: 279 -GYVPGPLPVGVPQGKLTTD-LTIDFQKPKSGAPILRVRGTTGLDNLEV--------VDA 328 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + + + + L+ D Sbjct: 329 NKAPLVAAKQVRATLADVRPLDNVFRLDALTLD 361 >gi|213161356|ref|ZP_03347066.1| hypothetical protein Salmoneentericaenterica_15537 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 649 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 34/331 (10%), Positives = 89/331 (26%), Gaps = 45/331 (13%) Query: 36 FERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQKEDGS--FES 81 ++ + + + A++G + + +P+P V +D+ + D Sbjct: 1 INQKVSTELNRPFAIRGDLGVVWERQKQESGWRSWVPWPHVHAEDVILGNPPDIPEVTMV 60 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--------RKSTMDM 133 + + L LL+ + + + + +P S+ +NW + Sbjct: 61 HLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQDKNTDPNAKPS 120 Query: 134 IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS----- 188 + L+ I GRI I D+ S + ++ + ++ + K + Sbjct: 121 AWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGKADKSTVGDYV 179 Query: 189 VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 + G ++ + ++++ +Q + + G + K Sbjct: 180 FGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSGVVNEPMKMGG 239 Query: 247 YSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQSILPN 296 +GD L RL +V + + + Sbjct: 240 VDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFNYRGFNGRIGDSD 299 Query: 297 SSTDEDNKTKVSQD-EENLLNFSENGAESMH 326 + L + Sbjct: 300 ----IHGTFTYTTGKPSPKLEGDVESRQLRL 326 >gi|78061018|ref|YP_370926.1| hypothetical protein Bcep18194_B0166 [Burkholderia sp. 383] gi|77968903|gb|ABB10282.1| protein of unknown function DUF748 [Burkholderia sp. 383] Length = 1264 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 100/340 (29%), Gaps = 47/340 (13%) Query: 3 RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 RR+ IGL + L+G F P I R E+Q + + + ++ +I + P+ Sbjct: 26 RRIGIGLLIFLVLFGLLGFFAAPPLI-----RHIAEQQLSQQLDRPATIQ---RIALNPY 77 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 ++ I + K I L +R + L G V ++ +D P + Sbjct: 78 TLNLEADGIHLGDKGGQGDFIDIAKLVVRPSWSSLFRGAPIVNEVRLDSPRFHIVRYDAQ 137 Query: 121 VSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 N+ + I V GRI D+ ++ + + + L I Sbjct: 138 RFNFTDLIEKFSKPSPKPESKPTQFSVSNIQVNNGRIDFDDRLLNEKHVVDNWTLGIPYV 197 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 V + FD A A+++ + ++ L P +I Sbjct: 198 ATLASKTDIF------VEPKLRARFDGSPIAIDGKTKPFAQSRESEIALKFDGLDVPKLI 251 Query: 233 D-----LFGNLFWNEKQPIYSGVFSVAG----------DFSKLLNLELSAKKSRLSGN-- 275 L + F ++G K + A + Sbjct: 252 SYVPAKLPVAVTSGLLSSDLKVNFVMSGETPALRVSGTVDLKDAKVTDHASAPLFAARGV 311 Query: 276 ------FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + + ++ + + S D+ V + Sbjct: 312 HVAAASLEPLRNAMHFDEIRIDQPVVDLSRDKQGVLNVEK 351 Score = 47.6 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 103/360 (28%), Gaps = 63/360 (17%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 +V KD ++ G+ + A L L + ++ IDQP ++ +GV Sbjct: 289 TVDLKDAKVTDHASA-PLFAARGVHVAAASLEPLRNAMHFDEIRIDQPVVDLSRDKQGVL 347 Query: 123 NWF----------------------------------------QRKSTMDMIHNVILEKI 142 N + ++ + Sbjct: 348 NVEKLAAQPAAASKAAEGKPAASGIAAASAAAVATASGAKAEAAADAKEAPPLDLTIRHF 407 Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202 + GG + + D+ LS + + L +++G A+ T + R Sbjct: 408 AIDGGTVNVDDRVPATPTALS---------LTKLAATLDGFTMQGKTPAKYTLSTSLSRG 458 Query: 203 A-FKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF-SVAGDFSKL 260 F K + K+ + LA P L L + + G + + Sbjct: 459 GDVNAEGTFNLAEKQVESKLTVAALALPA---LQPYLGEATRARVLDGTLGATVNAKADW 515 Query: 261 LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320 L+A+ + + + K +I+ ++ + K V+ + + + Sbjct: 516 GKTPLAAQVA--DSTVSLKSLKIATPDAKAPAIVLPDASAKIAKVDVATRTAEIASVDVS 573 Query: 321 GAESMH------DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374 G ++ E + + + + + D + K++ NF+ Sbjct: 574 GLALDVQRLKDGKIDLAALAEPAQASVPKRTVARKAEAAAPSWHYRIDALNVKDSSANFT 633 >gi|161870541|ref|YP_001599713.1| hypothetical protein NMCC_1606 [Neisseria meningitidis 053442] gi|161596094|gb|ABX73754.1| conserved hypothetical protein [Neisseria meningitidis 053442] Length = 704 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 119/381 (31%), Gaps = 23/381 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ + L L + +V + R ++ +KI+ I+ +LP Sbjct: 12 LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I + ++ + + L S +I++ + L G Sbjct: 71 PTVILKNLTITEPGGDRTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 W + + +I V+ +++ + L ++NL + + + Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S V + + + ++ P + + + I I G+ Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSNGIGPPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297 + NL L+A+ L+ + + + + + Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLA--LRNNSIKIETVNGAFTAGGEYAQWDG 300 Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 S D K + N+ N +G+ ++ LN + E + + L + Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358 Query: 352 QYSVNKKEEKDNSHDKENQEN 372 Q +VN+ + + + Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379 >gi|161524876|ref|YP_001579888.1| AsmA family protein [Burkholderia multivorans ATCC 17616] gi|189350374|ref|YP_001946002.1| hypothetical protein BMULJ_01539 [Burkholderia multivorans ATCC 17616] gi|160342305|gb|ABX15391.1| AsmA family protein [Burkholderia multivorans ATCC 17616] gi|189334396|dbj|BAG43466.1| hypothetical protein BMULJ_01539 [Burkholderia multivorans ATCC 17616] Length = 782 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 62/157 (39%), Gaps = 16/157 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIR 70 DW R + + + +G+ A+ G + + + +P+ ++I Sbjct: 36 FIFTFDWNRARPLVDDKVSAAIGRPFAINGDLTVRWHRAAGETGWRAWVLWPTFVARNIT 95 Query: 71 IDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128 I + + + ++ + + + LPLL+ +I + + + P ++ + G +NW + Sbjct: 96 IANPDWTKQRYFATLDQIDFQVKMLPLLAHDIVIPTINLISPSVDLERLADGRNNWTFKF 155 Query: 129 STMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLS 163 + + L I + G I + DQ+ ++ Sbjct: 156 KSSAHPLAWKLDLHDIRLDKGNIALSDQQKGLAMQVT 192 >gi|296137127|ref|YP_003644369.1| AsmA family protein [Thiomonas intermedia K12] gi|295797249|gb|ADG32039.1| AsmA family protein [Thiomonas intermedia K12] Length = 753 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 29/275 (10%), Positives = 88/275 (32%), Gaps = 17/275 (6%) Query: 16 VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE 75 V+ G + L D ++ + + + + G I++ + P ++ + +++ Sbjct: 18 VVGGMSILLLTFDPNQYKATLIQVVQEREHRTLTLPGTIELTLFPPLTLRTGPFSLSERD 77 Query: 76 DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-------QRK 128 + ++ + L + + LL ++ V + + +P ++ ++G N+ Sbjct: 78 SPAVFARADDLRLHLDLFALLRRKLVVDRVVMIKPQIHVARDAQGRFNFADLLPDSKPES 137 Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID----- 183 ++ + + ++ V+ G + D ++ L L++ +S ++ Sbjct: 138 ASPRSPLGLSVHRLQVEQGVLFYDDDKAKLHGQLDGLDVGLSGLDGGNAGAFHLETTARF 197 Query: 184 ---SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 ++ + G D + + +T + + + + L W Sbjct: 198 VQPALATRIALRGKLLADPAQHSVALTDLALSAQGDVPGLKAMQTQLNADQLGLRTGSLW 257 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 + G NL L Sbjct: 258 ALTARQW--RIKTTGRTESGENLSAQISLPTLEAK 290 >gi|56479039|ref|YP_160628.1| hypothetical protein ebA6298 [Aromatoleum aromaticum EbN1] gi|56315082|emb|CAI09727.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 1227 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 43/292 (14%), Positives = 94/292 (32%), Gaps = 28/292 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61 R V G + + ++G +P R R +G+ + ++ K+ I PF Sbjct: 19 RPVKWIAGIVVVIAILGFLILPPV-----ARHFGARLLGDSIGRTVTIE---KVRINPFA 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ I + + L E LL G + ++ +++P + G Sbjct: 71 LSMTVSGFNIAEADGQGNALSFGTLYANLEAESLLRGGPVLRELRLERPQAHLVRLDGGR 130 Query: 122 SNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 NW ++ L I V G++ + D+ + LS +N+ + Sbjct: 131 HNWSDVLERFAAKPQQEEKKGEARFSLNNIRVIDGKLLVEDRPVGLEHELSAINIGLPFL 190 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 V E + + + + A ++ +L I L + + Sbjct: 191 SNLPSKVELF------VEPELSALVNGRPLQVTGQSRPFAPDRETALGIDLDGFDFTPYL 244 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 L ++ + G + + K L+G+ +++D + Sbjct: 245 ---AYLPFDAAFKVPEGRLT-TRLRLAFSQPPEATPKVALTGSVELADLRLE 292 >gi|167905219|ref|ZP_02492424.1| hypothetical protein BpseN_23449 [Burkholderia pseudomallei NCTC 13177] Length = 365 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 87/287 (30%), Gaps = 27/287 (9%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66 G+G L +V G F R E+Q + + + + +I P+ + Sbjct: 28 GVGALIVLVAFGLLG--FFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEA 82 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 83 DGVRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTD 142 Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + I V GRI+ D+ ++ + + + I Sbjct: 143 LVDKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNEKHVVDQWTVGIPFIATLPSK 202 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237 V + D A A+++ S+ ++ L P ++ Sbjct: 203 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTK 256 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 L + + S V + R+SG ++D V Sbjct: 257 LPVDVRSGRLSSNLDV------NFAMTGDTPSLRVSGTLDLNDAQVT 297 >gi|207725382|ref|YP_002255778.1| hypothetical protein RSMK00260 [Ralstonia solanacearum MolK2] gi|206590618|emb|CAQ37580.1| conserved hypothetical protein [Ralstonia solanacearum MolK2] Length = 1262 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 101/333 (30%), Gaps = 35/333 (10%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65 IGLG L + + G E Q + + + + V KI + P+ + Sbjct: 50 IGLGVLIFLAVFGLLGAVG--GPPLLHHLAETQLSKYLERPVTVG---KIRLNPYTLRLE 104 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 + I +++ + I L + A + + + ++ +D P + +++ N+ Sbjct: 105 IDQLHIAERDGKTPFVDIGHLHVNAAWSSIFRRAPVIEELTVDAPRVRIVRTAEQRFNFS 164 Query: 126 -----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 K + + + + G I+ +DQ + + L + + Sbjct: 165 DIVDRLTRPEVPPKPKSNEPARFLFANLRLNNGAIQFVDQPLGAQHTVDGLQIGVPFL-- 222 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 P +D ++A D F A++ SL I+L L P + Sbjct: 223 -ASLPADVDIFVQPLLA---ARIDGAPLHFAGKTKPFAQSLESSLNIKLDGLDLPRYL-- 276 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 G + I G + + R+ G + + V Sbjct: 277 -GYVPGPLPVAIPQGKLTTD-LTIDFQKPKTGNPVLRVHGTAGLDNLEVT--------DA 326 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + + + + L+ + D Sbjct: 327 GKAPLVATKQLRATLSDVRPLDNVYHLDALSLD 359 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 27/278 (9%), Positives = 85/278 (30%), Gaps = 33/278 (11%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + ++ + + + L + L + + +D ++ ++ G Sbjct: 315 TAGLDNLEVTDA-GKAPLVATKQLRATLSDVRPLDNVYHLDALSLDGVRVDATRAADGSI 373 Query: 123 NWF---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV--YFLSDL 165 N+ + +V + K+ + I+ D + L DL Sbjct: 374 NFARLGGKPAPVEAKPTPSTPAAQPKPLDVAVGKLQLANSSIRWRDATTQPAADLVLDDL 433 Query: 166 NLQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKI 221 + ++ R L + L + + G++ +G+ + D + ++ + L+ Sbjct: 434 HGDVAVRTLGGPTTLDVGAKLASGGTLNVKGSTSLDKRTGELELKLDAIKLAAVEPYLRQ 493 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSG----------VFSVAGDFSKLLNLELSAKKSR 271 P + G + ++ ++A L + Sbjct: 494 AGAPQLQNGALSADGKIALEFGADKFNVRAEPLVATLADLALAPATRNDTALRAKQLRVD 553 Query: 272 LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + NF ++ + ++ + ++ + +D T ++ Sbjct: 554 VK-NFDLASRTLALNEVRSDALQLDVLRKQDGSTVLTL 590 >gi|107027703|ref|YP_625214.1| hypothetical protein Bcen_5368 [Burkholderia cenocepacia AU 1054] gi|116693585|ref|YP_839118.1| hypothetical protein Bcen2424_5492 [Burkholderia cenocepacia HI2424] gi|105897077|gb|ABF80241.1| protein of unknown function DUF748 [Burkholderia cenocepacia AU 1054] gi|116651585|gb|ABK12225.1| protein of unknown function DUF748 [Burkholderia cenocepacia HI2424] Length = 1275 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 98/292 (33%), Gaps = 29/292 (9%) Query: 3 RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 RR+ IG+ + L+G F P I R E+Q + + + ++ +I + P+ Sbjct: 26 RRIGIGVLIFLVLFGLLGFFAAPPLI-----RHVAEQQLSKQLDRPATIQ---RIALNPY 77 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 ++ IR+ ++ I L +R + L G V ++ +D P + Sbjct: 78 TLNLEADGIRLGERGGQGDFIDIGKLVVRPSWSSLFRGAPIVNEVRLDSPRFHVVRYDAQ 137 Query: 121 VSNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 N+ + I V GRI D+ ++ + + + L I Sbjct: 138 RFNFTDLIEKFSSPTPKPDSKPTQFSVSNIQVNDGRIDFDDRLLNEKHVVDNWTLGIP-- 195 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 V + FD + A+++ + ++ L P +I Sbjct: 196 ----YIATLASKTDIFVEPKLRARFDGSPISIDGKTKPFAQSRESEIALKFDRLDVPKLI 251 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + SG+ S + + + R+SG +SD V Sbjct: 252 S---YVPAKLPVAVTSGLLS-SNLTVNFV-MSGETPALRVSGTVDLSDAKVT 298 Score = 40.6 bits (93), Expect = 0.43, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 79/308 (25%), Gaps = 65/308 (21%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 +V D ++ + G+ + A L L + ++ +DQP ++ +GV Sbjct: 289 TVDLSDAKVTDRASA-PLFAARGVHIAAAGLEPLRNAMHFDEIRLDQPVVDLSRDKQGVL 347 Query: 123 NWF---------------------------------------------QRKSTMDMIHNV 137 N + ++ Sbjct: 348 NVEKLVAQPAAAPKAAAGKPGASAVAVSGASAASGATVAAASGAKAEGSAAAKAAPPLDL 407 Query: 138 ILEKIHVKGGRIKIID--QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195 + + + GG I + D + L+ L + L +P ++ S+ G Sbjct: 408 TIRHVAIDGGTINVDDRVPATPTALSLTKLAATLDGFSLQGKTPAKY-TLSTSLSRGGDV 466 Query: 196 NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID-LFGNLFWNEKQPIYSGVFSVA 254 + + A+ A++L L L G L G +A Sbjct: 467 KAEGAFNLAAKQADTKLTVAALALPALQPYLGEATRARVLDGTLGATVNAKTDWGKTPLA 526 Query: 255 G---------DFSKLLNLELSAKKSRLS------GNFKISDGNVRISRYKLQSILPNSST 299 K+ + A L ++ I+ + + Sbjct: 527 AEVADSTVSLKSLKIAAPDNKAPAIVLPDASAKIAKIDVAARTAEIASVDTSGLALDVKR 586 Query: 300 DEDNKTKV 307 +D K + Sbjct: 587 LKDGKIDL 594 >gi|326402256|ref|YP_004282337.1| hypothetical protein ACMV_01080 [Acidiphilium multivorum AIU301] gi|325049117|dbj|BAJ79455.1| hypothetical protein ACMV_01080 [Acidiphilium multivorum AIU301] Length = 999 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 89/314 (28%), Gaps = 31/314 (9%) Query: 15 VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74 ++ A P I R ER A+ +VG+ + ++G I + +LP P + +++ I Sbjct: 2 LIGAAALYGPRLISGDYHRGAIERLASGVVGRPVYIEGPITLSLLPDPQLVAENVIIGGP 61 Query: 75 EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134 L + PLL G +R + + P++ + Sbjct: 62 HGAQ--VTTAVLKLDLAPGPLLLGRLRATRLALQHPYITLP------WPLPGGAEALAPP 113 Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 + + G +I R + + + + A GT Sbjct: 114 PWLGSLHATLHDGTFRI-----------------GPLRLDHANLSIFTGGPQAVISASGT 156 Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI-IIDLFGNLFWNEKQ-PIYSGVFS 252 +A + + + + +L + + G L + + + Sbjct: 157 TMLGKTPAAIALRVDDTGSDGPAPMTAELKLGKDALTTLSFHGALGHDSRLEGVIDIAAD 216 Query: 253 VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312 L L+ S+ ++G + Q + + ++ Sbjct: 217 KKAVSELLPELQKSSAPLHVTGQLAATGHLAAFENVSAQFGSA----QVEGQGALALVPA 272 Query: 313 NLLNFSENGAESMH 326 LL + G Sbjct: 273 PLLRITAKGDGLDL 286 >gi|192361323|ref|YP_001981048.1| AsmA family superfamily [Cellvibrio japonicus Ueda107] gi|190687488|gb|ACE85166.1| AsmA family superfamily [Cellvibrio japonicus Ueda107] Length = 718 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 55/367 (14%), Positives = 113/367 (30%), Gaps = 49/367 (13%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFESKIEGL 86 F+ E A G + + G + P V DI + E ++++ Sbjct: 27 SPNQFKPHIEAAAKEQ-GIALHM-GDLGWAFWPSIGVSLADITVAAVETPEKPIAELKNA 84 Query: 87 SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM------------- 133 S+ +PL GE +V + +D ++ + +G NW + Sbjct: 85 SLMLALMPLFRGEFQVDHVAVDGAQIHLAVDKQGKGNWEALSQSSTPESSEKAQVQSQTQ 144 Query: 134 -------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS-- 184 N+ +EKI + + D+++ Q+ L DLN+ ++ + S Sbjct: 145 SQASEAKPLNLEVEKISLTNSALDYHDEKTGQIINLRDLNIVLTGVNTQGNPFDAQLSWL 204 Query: 185 ----IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 + + G +N+ + K N + + L + A I +D + Sbjct: 205 LELVQANTDKLQVKGELNNRVTLDKEFNNLQLDDGQLRLTLTQKSSA-DIALDYQLAVKD 263 Query: 241 NEKQPIYSGVFSVAGDFSK----------LLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 +K Y G + ++ + K L K V + +L Sbjct: 264 LQKDMSYQGKLQLLSLNARQVLAALGTRLDTANSDALKHVALGTAIKGDTKQVALDDLQL 323 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-----LNETDFFEEEEKKNKNDD 345 T V+ + L G D +ET ++ ++ Sbjct: 324 TL----DKTRFTGNLAVTDLATSALKLKLTGDSINVDDYLPPPSETPAAAQQAAATEDTP 379 Query: 346 LKKDDIQ 352 L + ++ Sbjct: 380 LPLEALR 386 >gi|148259105|ref|YP_001233232.1| hypothetical protein Acry_0084 [Acidiphilium cryptum JF-5] gi|146400786|gb|ABQ29313.1| hypothetical protein Acry_0084 [Acidiphilium cryptum JF-5] Length = 999 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 89/314 (28%), Gaps = 31/314 (9%) Query: 15 VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74 ++ A P I R ER A+ +VG+ + ++G I + +LP P + +++ I Sbjct: 2 LIGAAALYGPRLISGDYHRGAIERLASGVVGRPVYIEGPITLSLLPDPQLVAENVIIGGP 61 Query: 75 EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134 L + PLL G +R + + P++ + Sbjct: 62 HGAQ--VTTAVLKLDLAPGPLLLGRLRATRLALQHPYITLP------WPLPGGAEALAPP 113 Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 + + G +I R + + + + A GT Sbjct: 114 PWLGSLHATLHDGTFRI-----------------GPLRLDHANLSIFTGGPQAVISASGT 156 Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI-IIDLFGNLFWNEKQ-PIYSGVFS 252 +A + + + + +L + + G L + + + Sbjct: 157 TMLGKTPAAIALRVDDTGSDGPAPMTAELKLGKDALTTLSFHGALGHDSRLEGVIDIAAD 216 Query: 253 VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312 L L+ S+ ++G + Q + + ++ Sbjct: 217 KKAVSELLPELQKSSAPLHVTGQLAATGHLAAFENVSAQFGSA----QVEGQGALALVPA 272 Query: 313 NLLNFSENGAESMH 326 LL + G Sbjct: 273 PLLRITAKGDGLDL 286 >gi|209547987|ref|YP_002279904.1| AsmA family protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533743|gb|ACI53678.1| AsmA family protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 630 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 43/340 (12%), Positives = 93/340 (27%), Gaps = 22/340 (6%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66 + L ++ + P I R E + G +KG + P P + Sbjct: 29 VFLLIALALFVALRVAAPYLITTGFVRSGIEDALSKWTGYHAEIKGSPVLEFWPTPRITL 88 Query: 67 KDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124 I I Q I+ LS + L G + ++ +P+L G+ +W Sbjct: 89 NQITIRQPRESGDKLLGSIDSLSADFSLIDALRGRTSFHEFHLVRPNLALTRDENGLIDW 148 Query: 125 F---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 +D + + + V+ G + + D ++ + Y + I Sbjct: 149 SYAGLLARAISGVRTENGAEVLDPDLDAEIGAVTVEDGALAVTDIKTAKTYRFDSVTADI 208 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 + L+ + + + F + +L F Sbjct: 209 AWPRLSGAISAVVIARINGEDLKVDFASRQPLLVFAGRNAETRTSLTSNLLTAHFQGIAN 268 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 I L + P + + +G + SA L + S +R + Sbjct: 269 IASLLALSGNITASIPDMPALLTWSGKSIPGIATLKSA---SLESDIMSSGNGLRFNNLS 325 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 L +++ D + + + + Sbjct: 326 LSLNEASATGVMD--LLTQPGKRPKIGGTLAFDQMNLKPF 363 >gi|110636561|ref|YP_676768.1| outer membrane integrity protein [Cytophaga hutchinsonii ATCC 33406] gi|110279242|gb|ABG57428.1| membrane spanning protein, required for outer membrane integrity [Cytophaga hutchinsonii ATCC 33406] Length = 1038 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 101/355 (28%), Gaps = 29/355 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGG-IKIHI-- 58 +++ L G V+L+ +P + + Q + ++ + + Sbjct: 17 MKKFLKISGISIGVLLLAMLILPFLF-KDKIKGIIDEQIKKNINGQVWYNAESFSLSLFS 75 Query: 59 -LPFPSVFFKDIRIDQK---EDGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLN 113 P +V ++ + G + S+ + + ++SG +I+V +++DQP + Sbjct: 76 HFPNLTVSIDELGLVSNVTEFKGDTLFAAKQFSLTIDIMSVISGDQIKVKGVFLDQPKIV 135 Query: 114 FYLSSKGVSNW---------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 G +W N+ +EK +K G I DQ L Sbjct: 136 TIFDKSGKMSWDITYPDTTQAPAAPEEPSTLNLSIEKWEIKDGTIIYDDQTMPMYAELKH 195 Query: 165 LNLQISARFLNIISPLS--IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 L+ + S + + L S V +GT D + N + Sbjct: 196 LDHKGSGDIMADVYDLKTYTKSTNVLVEYDGTKYLDGQTVTADAAMNIDLAKSVYKF-LD 254 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA------KKSRLSGNF 276 G + ++ K L L A +K + G Sbjct: 255 NEFAINDFKFGFNGAIEMPTDDIKMDITYNAKETDFKNLLSLLPAVYNKDFEKVKTEGII 314 Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVS--QDEENLLNFSENGAESMHDLN 329 + + +D + D +N + + ++ Sbjct: 315 GFDGYVKGVYNETTMPGFGLNMLIKDGYFQYPDLPDAVKNINLDLHVDDKDGVID 369 >gi|322421307|ref|YP_004200530.1| hypothetical protein GM18_3828 [Geobacter sp. M18] gi|320127694|gb|ADW15254.1| protein of unknown function DUF748 [Geobacter sp. M18] Length = 1210 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 43/322 (13%), Positives = 97/322 (30%), Gaps = 38/322 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-F 61 + + IGLG + +++L +P+ + + G+K + + I P Sbjct: 6 KYLFIGLGVIAALLLFTVAILPVIV-----KNKAVTALEEATGRKAQIG---SVSINPLT 57 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 V D I E G L + + + ++ +D P N ++ Sbjct: 58 LHVKVDDFAIAG-EAGPPLVAFRELHASLAPASIFKRALILSEITLDAPTFNLVRTAPNR 116 Query: 122 SNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLNLQI-- 169 N+ +KS L I +K G I+ D+ + + + +LN+ I Sbjct: 117 FNFSDIIDRQSKEKKSEKGTPLQFSLNNISIKNGSIEFDDRMVGGGRKHSVRELNIAIPF 176 Query: 170 ---SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT-------ANFPAKNKAISL 219 S I ++ G + + + N P + Sbjct: 177 ISNSPYLAERYIDPRITALVNGASFNFAGKLKPMSKSLETSVHVGLKQLNLPQLVAYYPV 236 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQ---PIYSGVFSVAGDFSKLLNLELSAKKSRLS--- 273 K + + +D+ + + + G+ + L + A+ L Sbjct: 237 KPPADLTSGKLTVDMDIGYRISADKEPELVLKGMSRLDDVAVDLPGGKPLARLPGLEVKA 296 Query: 274 GNFKISDGNVRISRYKLQSILP 295 ++ + N++ + Sbjct: 297 AKLEVLNKNLQFDSIAATGLEL 318 >gi|218462504|ref|ZP_03502595.1| hypothetical conserved membrane protein [Rhizobium etli Kim 5] Length = 340 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 91/313 (29%), Gaps = 20/313 (6%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66 + L + + P I R E + G + +KG + P P + Sbjct: 29 VLLLIALGLFVALRVAAPYLITTGFVRSGIEDALSKWTGYQAEIKGDPVLEFWPTPRIIL 88 Query: 67 KDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124 ++ I Q IE LS + L G + ++ +P+L KG+ +W Sbjct: 89 NEVTIRQPRESGDKLLGSIESLSADFSLIDALRGRTSFHEFHLVRPNLALTRDEKGLIDW 148 Query: 125 F---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 +D + + + V+ G + + D S + Y + I Sbjct: 149 SYAGLLARAINGVRYENGAEVLDPALDAEIGAVTVEDGTLAVTDIISAKTYRFDSITADI 208 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 + L+ + + + AF + + +L F Sbjct: 209 AWPRLSGAISAVVIARIDGEDLKVDFASRQPLLAFAGKSAEMRTSLTSNLLTARFQGIAS 268 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 I + P + + +G + SA L + S +R + Sbjct: 269 IASLSALSGNIAASIPDVPALLTWSGRSIPGIGTLKSA---SLESDIVSSGSGLRFNDLS 325 Query: 290 LQSILPNSSTDED 302 L +++ D Sbjct: 326 LSLNEASATGVMD 338 >gi|86356369|ref|YP_468261.1| hypothetical protein RHE_CH00718 [Rhizobium etli CFN 42] gi|86280471|gb|ABC89534.1| hypothetical conserved membrane protein [Rhizobium etli CFN 42] Length = 630 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 92/328 (28%), Gaps = 26/328 (7%) Query: 21 FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK--EDGS 78 P I R E + G +KG + P P + + I Q Sbjct: 43 VAAPYLITTGFVRSGIEDALSKWTGYHAEIKGNPVLEFWPTPRITLNQVTIRQPRESGDK 102 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------------- 125 IE LS + L G + ++ +P+L G+ +W Sbjct: 103 LLGSIESLSADFSLIDALRGRTSFHEFHLLRPNLALTRDENGLIDWSYTGLLAHAISGVR 162 Query: 126 --QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 +D + + + V+ G + + D S + Y + I L+ + Sbjct: 163 YENGAEVLDPALDAEIGAVTVEDGTLAVTDVRSAKTYNFDSVTADIGWPRLSGAISAVVI 222 Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKIQLFPLAYPIIID-LFGNLFWN 241 + V + AF + + + L + +A + L GN+ Sbjct: 223 ARINGVDLKVDFASRQPLLAFAGKSAETRTSLTSNLLTARFQGIASIASLSALSGNIAV- 281 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 P + +G + SA L + S +R + L +++ Sbjct: 282 -SIPDVPAFLTWSGRSLPGVGTLKSA---SLESDIMSSGSGLRFNDLSLSLNEASATGVM 337 Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLN 329 D + + + + Sbjct: 338 D--LSTTTGRRPKIGGTLAFDQMNLKPF 363 >gi|254475416|ref|ZP_05088802.1| AsmA [Ruegeria sp. R11] gi|214029659|gb|EEB70494.1| AsmA [Ruegeria sp. R11] Length = 650 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 32/312 (10%), Positives = 81/312 (25%), Gaps = 24/312 (7%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIEGLS 87 + Q G+ + G + + P V + + E L+ Sbjct: 28 EKLAKLAADQIEAQTGRTVTFGGRVGYTLWPTLGVKADRVALSNASWAGPEPMLTAERLT 87 Query: 88 MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW------------FQRKSTMDMIH 135 + L++G++RV ++ P LN G NW S Sbjct: 88 IGIAAADLIAGKVRVTELSAVLPQLNLSTREDGTGNWVLERPTAADVQTTASSSGAFDSL 147 Query: 136 NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195 V +E +++ G ++ + + +++ ++ + + A Sbjct: 148 PVSIEALNLTGATLRYA-PFGEAPVEMRQVDVALAWPDPTGTVDMDVTLRP----AGAPV 202 Query: 196 NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255 + F + S+ + L + +L G ++A Sbjct: 203 RVVGEIGTFAAFLAGEVSSIGASITAKDTELRFDGRAELTGAASGRLTGRSTDLGATLAA 262 Query: 256 DFSKLLNLELSAKKSRLSGNFKI-SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314 + + + SDG + + L + ++ + Sbjct: 263 FGVAPGAELPKVGEWLIGADATYTSDGRLALRDLSLSA----DENRITGGADITLAGKPT 318 Query: 315 LNFSENGAESMH 326 + + Sbjct: 319 ITAQLSAGALDL 330 >gi|170737139|ref|YP_001778399.1| hypothetical protein Bcenmc03_4779 [Burkholderia cenocepacia MC0-3] gi|169819327|gb|ACA93909.1| protein of unknown function DUF748 [Burkholderia cenocepacia MC0-3] Length = 1277 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 102/340 (30%), Gaps = 47/340 (13%) Query: 3 RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 RR+ IG+ + L+G F P I R E+Q + + + ++ +I + P+ Sbjct: 26 RRIGIGVLIFLVLFGLLGFFAAPPLI-----RHVAEQQLSKQLDRPATIQ---RIALNPY 77 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 ++ I + ++ I L +R + L G V ++ +D P + Sbjct: 78 TLNLEADGIHLGERGGQGDFIDIGKLVVRPSWSSLFRGAPIVNEVRLDSPRFHVVRYDAQ 137 Query: 121 VSNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 N+ + I V GRI D+ ++ + + + L I Sbjct: 138 RFNFTDLIEKFSSPTPKPDSKPTQFSVSNIQVNDGRIDFDDRLLNEKHVVDNWTLGIP-- 195 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 V + FD + A+++ + ++ L P +I Sbjct: 196 ----YIATLASKTDIFVEPKLRARFDGSPISIDGKTKPFAQSRESEIALKFDRLDVPKLI 251 Query: 233 D--------------LFGNLFWNEKQPIYSGVFSVAG-DFSKLLNLELSAKKSRLSGN-- 275 L NL N + V+G + A + Sbjct: 252 SYVPAKLPVAVTSGLLSSNLTVNFVMSGETPALRVSGTVDLNDAKVTDRASAPLFAARGV 311 Query: 276 ------FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + + +L + + S D+ V + Sbjct: 312 HVAAAGLEPLRNAMHFDEIRLDQPVIDLSRDKQGVLNVEK 351 Score = 42.2 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 82/317 (25%), Gaps = 67/317 (21%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 +V D ++ + G+ + A L L + ++ +DQP ++ +GV Sbjct: 289 TVDLNDAKVTDRASA-PLFAARGVHVAAAGLEPLRNAMHFDEIRLDQPVIDLSRDKQGVL 347 Query: 123 NWFQRKSTM-----------------------------------------------DMIH 135 N + + Sbjct: 348 NVEKLVAQPAAAPKAEAGKPAASAAAVSAATASGASSGAVAAASGAKAEGSAAAREAPPL 407 Query: 136 NVILEKIHVKGGRIKIID--QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193 ++ + + + GG I + D + L+ L + L +P ++ S+ G Sbjct: 408 DLTIRHVAIDGGTINVDDRVPATPTALSLTKLAATLDGFTLQGKTPAKY-TLSTSLSRGG 466 Query: 194 TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID-LFGNLFWNEKQPIYSGVFS 252 + + A+ A++L L L G L G Sbjct: 467 DVTAEGAFNLAAKQADTKLTVAALALPALQPYLGEATRARVLDGTLGATVNAKTDWGKTP 526 Query: 253 VAG---------DFSKLLNLELSAKKSRLS------GNFKISDGNVRISRYKLQSILPNS 297 +A K+ + A L ++ I+ + + Sbjct: 527 LAAEVADSTVSLKSLKIAAPDNKAPAIALPDASAKIAKIDVAARTAEIASVDATGLALDV 586 Query: 298 STDEDNKTKVSQDEENL 314 +D K ++ E Sbjct: 587 KRLKDGKIDLAALAEPA 603 >gi|258591568|emb|CBE67869.1| exported protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 669 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 97/337 (28%), Gaps = 42/337 (12%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KEDGSFESKIEGL 86 D +R + + ++ + + G +++H+LP P V +++ I E L Sbjct: 31 DQERYRGILIGRVSQLLNRNVTATG-LRVHLLPSPEVTIRNVVIADRAPWSEPFVDAEQL 89 Query: 87 SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ-------------------- 126 + + LPLL G+I++ ++ ID+P + G N Sbjct: 90 HVSLKLLPLLKGDIQIGNIRIDRPRIRLAKGPDG-WNLDDLIRPAARGATVEPHHTEGTR 148 Query: 127 RKSTMDMIHNVILEKIHVKGGRIKIID---QESDQVYFLSDLNLQISARFLNIISPLSID 183 + ++ + ++ G + + + D+N+ I A D Sbjct: 149 AARGQPALPVLLAGTLAIRHGALVVDNPLHPYGPVTLEFQDINMDIPATRSPHPLRFQAD 208 Query: 184 SI-----KGSVIAEGTG-NFDNKRSAFKITA------NFPAKNKAISLKIQLFPLAYPII 231 GS G+ + R ++ + A + Sbjct: 209 GQLPGETSGSFELTGSVQRAEGNRIPIEVELRVRGLDAAQLASAIGLSGGAAAAFAGTLD 268 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 ++ W G + K+RL + G + +S L Sbjct: 269 VEGKAVGEWPRLDLDTDVDLQRLGVTLAKEMGKAPGDKARLHAKGRWEGGQLDLSDINL- 327 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328 + ++ + L F N E + Sbjct: 328 ---LWKGQTIAGRLHLATQQSPRLQFWLNTPELSLEP 361 >gi|300704763|ref|YP_003746366.1| hypothetical protein RCFBP_20585 [Ralstonia solanacearum CFBP2957] gi|299072427|emb|CBJ43772.1| Conserved protein of unknown function [Ralstonia solanacearum CFBP2957] Length = 1262 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 101/333 (30%), Gaps = 35/333 (10%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65 IGLG L + + G E Q + + + + V KI + P+ + Sbjct: 50 IGLGVLIFLAVFGLLGAVG--GPPLLHHLAETQLSKYLERPVTVG---KIRLNPYTLRLE 104 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 + I +++ + + L + A + + + ++ +D P + +++ N+ Sbjct: 105 IDQLHIAERDGKTPFVDVGHLHVNAAWSSIFRRAPVIEELTVDAPRVRIVRTAEQRFNFS 164 Query: 126 -----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 K + + + + G I+ +DQ + + L + + Sbjct: 165 DIVDRLTQPEIPPKPKSNEPARFLFANLRLNDGAIQFVDQPLGAQHTVDGLQIGVPFL-- 222 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 P +D ++A D F A++ SL I+L L P + Sbjct: 223 -ASLPADVDIFVQPLLA---ARIDGAPLRFAGKTKPFAQSLESSLNIKLDGLDLPRYL-- 276 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 G + I G + + R+ G + + V Sbjct: 277 -GYVPGPLPVAIPQGKLTTD-LTIDFQKPKTGNPVLRVHGTAGLDNLEVT--------DA 326 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + + + + L+ + D Sbjct: 327 GKAPLVATKQLRATLSDVRPLDNVYHLDTLSLD 359 Score = 58.0 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 31/277 (11%), Positives = 84/277 (30%), Gaps = 31/277 (11%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + ++ + + + L + L + + +D ++ ++ G Sbjct: 315 TAGLDNLEVTDA-GKAPLVATKQLRATLSDVRPLDNVYHLDTLSLDGLRVDAARAADGSI 373 Query: 123 NWF---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV--YFLSDL 165 N+ + +V + K+ + I+ D + L DL Sbjct: 374 NFARLGGKPAPAEAKPAPSTPAAQPKPLDVAVGKLQLANSSIRWRDATTQPAADLVLDDL 433 Query: 166 NLQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKI 221 + I+ R L + L + + G++ +G+ + D ++ + L+ Sbjct: 434 HGDIAVRTLGGPTTLDVGAKLASGGTLNVKGSTSLDKHTGELELKLDAIKLAAVEPYLRQ 493 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL--------ELSAKKSRLS 273 P + G + ++ L L L AK+ R+ Sbjct: 494 AGAPQLQNGALSADGKIALEFGADKFNVRAEPLVATLTDLALAPTTRNDTALRAKQVRVD 553 Query: 274 GN-FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 F ++ + ++ ++ + +D T ++ Sbjct: 554 VKSFDLAARTLALNEVHSDALQLDVLRKQDGSTVLTL 590 >gi|293607603|ref|ZP_06689937.1| hypothetical protein HMPREF0004_5513 [Achromobacter piechaudii ATCC 43553] gi|292814036|gb|EFF73183.1| hypothetical protein HMPREF0004_5513 [Achromobacter piechaudii ATCC 43553] Length = 832 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 35/326 (10%), Positives = 87/326 (26%), Gaps = 41/326 (12%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82 L D ++ E + + + G I++ + P + + + + + + Sbjct: 26 FLLTFDPNAYKYKLEELVQERYHRTLTIDGEIELSLFPRIGLSVQGVSLSEPNSPETFAS 85 Query: 83 IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--------------- 127 IE + PLLS V + I G N+ Sbjct: 86 IESTRLAVAVWPLLSNSFVVDHVAISGLKARVVRGKDGQFNFSNLVGGASTTTAAPASPA 145 Query: 128 ------------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 + + + +K G +++ D S ++ +N Sbjct: 146 EALVGAAQTAAQAITSGTLPASRNNMQIDIAGLDLKDGEVQLQDAISGMAVAVTKINANT 205 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-PLAY 228 N + + + N + + + + L++ P A Sbjct: 206 GRVTFNQPFDVRLTARVEGGNPRVDANLTGQALLTLDPSAKRYAAQKLDLRMDGKLPGAE 265 Query: 229 PIIIDLFGNLFWNEKQPIYS-------GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281 + + GNL +N ++ + ++ +E S +LS + S Sbjct: 266 AKSLAVRGNLAFNGQKSALDVAGLEVVFQGDITDPAARATGVEASVAMPKLSIDPHKSQL 325 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKV 307 + + + + + Sbjct: 326 QIEKLAVRAKGGSADGPFEFAVDAPA 351 >gi|296534439|ref|ZP_06896878.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] gi|296265234|gb|EFH11420.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] Length = 573 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 86/314 (27%), Gaps = 33/314 (10%) Query: 15 VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74 +VL G + P DW + R+ A +G+++ + G +++ +LP P + + I Sbjct: 1 MVLAGLWYGPRLTDWNEHRDRLAILAAGRLGQRVTLAGPVQLTLLPQPMLEAGGVTIGGP 60 Query: 75 EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134 ED + L +R + LL + ++ + + R Sbjct: 61 EDDI-SIRARALRLRLDLPALLRLRLEPREVALVGAEIRLPWPPVPAGGQPFRPPPWLTG 119 Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 ++ V G++ + + + L+ S ++ +G Sbjct: 120 LQGRIQDSRVTIGQLVL----------------------ERVEADLAAASASEALRIQGR 157 Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254 + F T + L + + + + G Sbjct: 158 FRWRQTDLDFDTTLGRAGWDGIAPLALTVSGARASAS-----ASGVLLPEGGFEGTLQGG 212 Query: 255 GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314 G L L A RL G S + L + + Sbjct: 213 GSDLSAL-LPAPAGSFRLRGRLSASADLLTADELALDLGGSPA----RGVATLRLAPMPR 267 Query: 315 LNFSENGAESMHDL 328 L+ + D Sbjct: 268 LDLALVTGRVELDP 281 >gi|221208524|ref|ZP_03581526.1| conserved hypothetical protein [Burkholderia multivorans CGD2] gi|221171712|gb|EEE04157.1| conserved hypothetical protein [Burkholderia multivorans CGD2] Length = 337 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 94/332 (28%), Gaps = 38/332 (11%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65 IGLG L +VL G F R E+Q + + + ++ +I + P+ ++ Sbjct: 28 IGLGILIFLVLFGLLG--FFAAPPLIRHIAEQQLSKQLDRPATIR---RIALNPYTLNLE 82 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 I + + I L +R + L G V ++ +D P N+ Sbjct: 83 ADSIHVGEHGGQGDFIDIAKLVVRPSWTSLFRGAPIVNEIRLDSPRFRIVRYDAQRFNFT 142 Query: 126 Q-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + I + GRI D+ ++ + + + L + Sbjct: 143 DLIEKFSTPSKPDSKPTLFSVSNIQINNGRIDFDDRLLNEKHVVDEWTLGVP------YI 196 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID---LF 235 V + FD A A+++ + ++ L P +I Sbjct: 197 ATLPSKTDIFVEPKLRMRFDGSPIAIDGKTKPFAQSRESEIALKFDRLDVPKLISYVPAK 256 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 + + + R+SG ++D V Sbjct: 257 LPVAVTSGLLSSDLSVNFV--------MSGDTPALRVSGTVDLTDAKVT--------GPA 300 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + V+ L + + E D Sbjct: 301 SEPLFAARGVHVAAAGLEPLRNAMHFDEIRLD 332 >gi|300115136|ref|YP_003761711.1| AsmA family protein [Nitrosococcus watsonii C-113] gi|299541073|gb|ADJ29390.1| AsmA family protein [Nitrosococcus watsonii C-113] Length = 667 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 61/366 (16%), Positives = 120/366 (32%), Gaps = 32/366 (8%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHIL-PFPSVFFKDIRIDQKEDG--SFESKIE 84 D ++ G+++ + G +K+ +L PS+ K IR++ E + I Sbjct: 28 DENRVKKWASSYVEQAYGRELVIAGDLKLDLLTLQPSITIKGIRLENAEWADKPNMATIS 87 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIH- 143 + + E LPL+ G+I + D I + + +EKI Sbjct: 88 KVFFQFELLPLILGKINLLDGEIRDGQVFLAEQKNKTNWNTFLPQEKKPPGYFAVEKIRS 147 Query: 144 --VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201 + + ++ + + L N+++ + G D Sbjct: 148 FKLSNFTVAYHNKAKKETHTLRMENIRLRDFYSPQR------------KVSFHGRIDTIP 195 Query: 202 SAFKI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS 258 +F+I +N +K + L + +A D+ G+ + + G + Sbjct: 196 VSFQIDQKASNEKKVDKLLVLTGHIDTIALYATGDISGHPKRVKGKVRVKGTGETLSRLA 255 Query: 259 KLLNLELS---AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315 KL LE A + + I D + +++ + K K+ +E+ L Sbjct: 256 KLAGLETRTFHAYDGSGTIDANIEDRWLNLTQLTINYGQS----QMRGKLKIDLNEKRTL 311 Query: 316 NFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV-NKKEEKDNSHDKENQENFS 374 G L DF +K + DI K+ EK D + E F Sbjct: 312 ---VRGNLLFPVLASPDFRPVAKKGAAELKEEVTDIDVKAQEKQSEKKKLFDDDPIEPFI 368 Query: 375 GDKMIL 380 ++ L Sbjct: 369 PARLEL 374 >gi|167818381|ref|ZP_02450061.1| hypothetical protein Bpse9_24811 [Burkholderia pseudomallei 91] Length = 302 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 86/287 (29%), Gaps = 27/287 (9%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66 G+G L +V G F R E+Q + + + + +I P+ + Sbjct: 28 GVGALIVLVAFGLLG--FFAAPPLIRHIAEQQLSQQLERPATIA---RIAFNPYTLRLEA 82 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 83 DGVRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTD 142 Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + I V GRI+ D+ + + + + I Sbjct: 143 LVDKFSRPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSK 202 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237 V + D A A+++ S+ ++ L P ++ Sbjct: 203 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTK 256 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 L + + S V + R+SG ++D V Sbjct: 257 LPVDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297 >gi|300692126|ref|YP_003753121.1| hypothetical protein RPSI07_2488 [Ralstonia solanacearum PSI07] gi|299079186|emb|CBJ51854.1| Conserved protein of unknown function [Ralstonia solanacearum PSI07] Length = 1264 Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 48/345 (13%), Positives = 106/345 (30%), Gaps = 38/345 (11%) Query: 3 RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 RR+ +G+ V L+GA P E Q + + + + V KI + P+ Sbjct: 48 RRIGLGVLIFLVVFGLLGAVGGPPL-----LHHLAETQLSKYLERPVTVG---KIRLNPY 99 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I +++ + I L + A + + + ++ +D P + +++ Sbjct: 100 TLRLEIDQLHIAERDGKTPFVDIGHLHVNAAWSSIFRRAPVIEELTVDAPRVRIVRTAEQ 159 Query: 121 VSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 N+ K + + + + G I+ +DQ + + L + + Sbjct: 160 RFNFSDIVDKLTQPEIPPKPKSNEPARFVFANLQLNNGAIQFVDQPLGAQHTVDGLRIGV 219 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 P +D ++A D F A++ SL I+L L P Sbjct: 220 PFL---ASLPADVDIFVQPLLA---ARIDGAPLYFAGKTKPFAQSLESSLNIRLDGLDLP 273 Query: 230 IIID-----LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + L + + + F + +L + +A L V Sbjct: 274 RYLGYVPGPLPVAVPQGKLTTDLTIDFQKPNIGNPVLRVHGTAGLDSLEVTDAKKAPLVA 333 Query: 285 ISRYKLQSI---LPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + + ++ D +S D + Sbjct: 334 AKQLRATLSDVRPLDNVYHLD---TLSLDGVRVDAVRAPDGSINF 375 Score = 59.9 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 27/277 (9%), Positives = 82/277 (29%), Gaps = 31/277 (11%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + + + + + L + L + + +D ++ + G Sbjct: 315 TAGLDSLEVTDAKKA-PLVAAKQLRATLSDVRPLDNVYHLDTLSLDGVRVDAVRAPDGSI 373 Query: 123 NWFQ---------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV--YFLSDL 165 N+ Q +V + K+ + I D + L DL Sbjct: 374 NFAQLGGKPAQTEAKPAPSAPVAQPKPLDVAVGKLQLANSSIHWRDATTQPAADLVLDDL 433 Query: 166 NLQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKI 221 + ++ R L + L + + G++ +G+ + + + ++ + L+ Sbjct: 434 HGDVAVRTLGGPTTLDVGAKLASGGTLNIKGSTSLEKRTGELELKLDAIKLTGVEPYLRQ 493 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL------ELSAKKSRLSGN 275 P + G + ++ L L + + + +L + Sbjct: 494 AGAPQLQNGALSADGKIALEFGADKFNVRAEPLVATLADLALAPATRNDTALRAKQLRAD 553 Query: 276 ---FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 F ++ + ++ + + + +D T ++ Sbjct: 554 IKSFDLAARTLALNEVRGDGLQLDVLRKQDGSTVLTL 590 >gi|17545615|ref|NP_519017.1| transmembrane protein [Ralstonia solanacearum GMI1000] gi|17427908|emb|CAD14598.1| putative transmembrane protein [Ralstonia solanacearum GMI1000] Length = 1261 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 95/295 (32%), Gaps = 31/295 (10%) Query: 3 RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 RR+ +G+ +V L+GA P E Q + + + + V KI + P+ Sbjct: 48 RRIGLGVLIFLAVFGLLGAVGGPPL-----LHHLAETQLSKYLERPVTVG---KIRLNPY 99 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I +++ + I L + A + + + ++ +D P + +++ Sbjct: 100 TLRLEIDQLHIAERDGKTPFIDIGHLHVNAAWSSVFRRAPVIEELKVDAPRVRIVRTAEQ 159 Query: 121 VSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 N+ K + + + + G I+ +DQ + + L + + Sbjct: 160 RFNFSDIVDKLTQPEVPPKPKSNEPARFVFANLQLNNGAIQFVDQPLGAQHTVDGLQIGV 219 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 P +D ++A D F A++ SL I+L L P Sbjct: 220 PFL---ASLPADVDIFVQPLLA---ARIDGAPLHFAGKTKPFAQSLESSLNIKLDGLELP 273 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + G + + G + R+ G + V Sbjct: 274 RYL---GYVPGPLPVAVPQGKLTTD-LTIDFQKPRTGNPVLRVHGTAGLDGLEVT 324 Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 27/284 (9%), Positives = 81/284 (28%), Gaps = 34/284 (11%) Query: 59 LPFPSVF----FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 P V + + + + L + L + + +D ++ Sbjct: 307 NPVLRVHGTAGLDGLEVTDTKKA-PLVAAKQLRATLSDVRPLDNVYHLDMLSLDGVRVDA 365 Query: 115 YLSSKGVSNWFQR--------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 + G N+ Q + +V + K+ + + D + Sbjct: 366 VRAPDGSINFAQLGGKPAPEAKPAAPAPAAQPKPLDVAVGKLQLANSSVHWRDATTQPAA 425 Query: 161 FLSDLNLQISARFLNIISPLSID-----SIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215 L +L A + P ++D + G++ +G+ + + + ++ Sbjct: 426 DLVLDDLHGDAAVRTLGGPTTLDVGAKLASGGTLNVKGSTSLEKRTGELELKLEALKLAG 485 Query: 216 AIS-LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL------ELSAK 268 L+ P + G + ++ L L + + + Sbjct: 486 IGPYLRQAGAPQLQNGALSADGKIALEFGADKFNVHAEPLVATLADLALAPATRNDTALR 545 Query: 269 KSRLSGN---FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 +L + F ++ + ++ + + + +D T ++ Sbjct: 546 AKQLRADIKSFDLAARTLALNEVRADGLQLDVLRKQDGSTVLTL 589 >gi|303247854|ref|ZP_07334122.1| AsmA family protein [Desulfovibrio fructosovorans JJ] gi|302490755|gb|EFL50656.1| AsmA family protein [Desulfovibrio fructosovorans JJ] Length = 1257 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 83/281 (29%), Gaps = 18/281 (6%) Query: 18 VGAFTVPL----FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73 + F +PL I + E+ + +G+++ + G + I +P+ + + + Sbjct: 19 LAVFVLPLAARELIGAARLKAITEQTLSDALGRRVTITGDVSILFVPWFGLSMGPVAVAD 78 Query: 74 KEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM 131 + + + LPLL + + + L + G +NW + Sbjct: 79 APGFGDAPMLTARRVELTIRVLPLLRRVVSPGSVRVRDLTLALRRDTSGRANWDDLTAPQ 138 Query: 132 DMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS---ARFLNIISPL 180 + ++ + D + + ++ NL+ +I Sbjct: 139 QTAAAEAPGWEVAPEPRDVRLENATVTYDDAVTGRTLSVTKANLKTGRSQPFDFSISFLA 198 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 G + +G + ++ +++ L P + + L Sbjct: 199 KGFMAGGQLECHASGQAGLNAATGELRLGKTLVETILTVDHPLVP-GGATPVRVASRLTA 257 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281 + + L SA S L G+ K++ Sbjct: 258 TYAPETGTLAVTDLDARLPEAILTGSATLSALPGDAKLATR 298 >gi|222054354|ref|YP_002536716.1| protein of unknown function DUF748 [Geobacter sp. FRC-32] gi|221563643|gb|ACM19615.1| protein of unknown function DUF748 [Geobacter sp. FRC-32] Length = 1195 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 89/307 (28%), Gaps = 24/307 (7%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPS 63 + L + F+ R E++ + G+ +A++ I I P Sbjct: 3 LWKKLAIAAAAFFTLLVLFVAFVLPGIVRSQAEKKVGALTGRTLAIR---HISINPLTMR 59 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 V +++ + S R + V +++ P++ + N Sbjct: 60 VKVDGLQMQEPGGKITFVSFSSASARLSPASIWRRAPIVTGIHVISPYVRIVRTGANRYN 119 Query: 124 WFQRKST-------MDMIHNVILEKIHVKGGRIKIIDQESD--QVYFLSDLNLQIS---- 170 + L I V GG I D+ + +++ + +++ + Sbjct: 120 FSDIPERMPKSEKKSSSPTLFSLNNITVTGGSINFDDRAARTPKLHTVRRMHIAVPFISN 179 Query: 171 -ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 ++ + + TG + + + + I P+ P Sbjct: 180 IPYLVDQYIQPRFAAEVNGASLDLTGRLKPFQKGMETLLDVNLTDLDIPYYAAYLPVRLP 239 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 + I + + + V D ++ + A RL+ K + R+ Sbjct: 240 MAI------KSGKFSSKIAISYRVTPDKKPVIAITGDAAVVRLAMAEKSEGELLSFDRFA 293 Query: 290 LQSILPN 296 ++ + Sbjct: 294 IKINQAD 300 >gi|163867834|ref|YP_001609038.1| hypothetical protein Btr_0603 [Bartonella tribocorum CIP 105476] gi|161017485|emb|CAK01043.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476] Length = 626 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 47/382 (12%), Positives = 115/382 (30%), Gaps = 60/382 (15%) Query: 1 MLRRVLIGLGFLFSVVL----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 M R++ L +F ++ VG F +P + R ++ + G + ++ ++ Sbjct: 1 MRIRIIKFLSGIFITIIFLFGVGIFVLPYLVSTDMIRVRLAQELSAWTGYNVQLRDPPRL 60 Query: 57 HILPFPSVFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 ++ P+P + + K +D + + E + + + LL G + + I +P Sbjct: 61 NLFPYPKALLSGVTLSSKIDDVAPLMEAESIEVDLSVVDLLWGRVSFSETRIVRPQFVME 120 Query: 116 LSSKGVSNWFQRKSTMDMIHNVIL------------------------EKIHVKGGRIKI 151 K ++++F R S + + ++ ++ G + Sbjct: 121 KPVKTMADFFDRFSRSQGALGLAIRKAREILKHNPEHPEIEHLLKQPFGRVFIENGALVY 180 Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP 211 D S ++ LN + L + + + + I A+ Sbjct: 181 HDSLSGVAEKITGLN-----------ATLDWSESTQEIRLRADARWRGEFTKLSIDASQA 229 Query: 212 ---AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268 +K L + I L + I+ G S+ + Sbjct: 230 LLLLAGGKSQIKASLNSVRGGITFTGQARLS---EYYIFDGKVSMRSPGWNQTLSWVGGT 286 Query: 269 ---------KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE-ENLLNFS 318 +F +++++ N+ K+ + + S Sbjct: 287 HFWGHRLKIPIVWESHFLARPMHIQMNNVTFTMGKANA----RGALKLDFQDYVPNVMGS 342 Query: 319 ENGAESMHDLNETDFFEEEEKK 340 +L + FF ++K Sbjct: 343 LAFDNLDLNLLGSMFFSVKKKN 364 >gi|167722207|ref|ZP_02405443.1| hypothetical protein BpseD_24554 [Burkholderia pseudomallei DM98] Length = 366 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 86/287 (29%), Gaps = 27/287 (9%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66 G+G L +V G F R E+Q + + + + +I P+ + Sbjct: 28 GVGALIVLVAFGLLG--FFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEA 82 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 83 DGVRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTD 142 Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + I V GRI+ D+ + + + + I Sbjct: 143 LVDKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNAKHVVDQWTVGIPFIATLPSK 202 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237 V + D A A+++ S+ ++ L P ++ Sbjct: 203 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTK 256 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 L + + S V + R+SG ++D V Sbjct: 257 LPVDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297 >gi|253998958|ref|YP_003051021.1| hypothetical protein Msip34_1248 [Methylovorus sp. SIP3-4] gi|253985637|gb|ACT50494.1| conserved hypothetical protein [Methylovorus sp. SIP3-4] Length = 1305 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 56/386 (14%), Positives = 114/386 (29%), Gaps = 34/386 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWT--DFREDFERQATLIVGKKIAVKGGIKIHI-L 59 R L+ L V ++ + +R D E +AT +G+K+++ G IK Sbjct: 11 RFTLLTLWLAIFVFAAAVLSMRYLVLPNIDKYRADIEARATAAMGQKVSI-GEIKASWDG 69 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + ++ I E + + +L + E R+ + I QP L+ ++ Sbjct: 70 LNPHLSLYNVDIHDAE-ERPALSLGHVEASLSWLSIPLLEPRLSSIEIYQPELSIRRDAQ 128 Query: 120 GV-----SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISARF 173 G + +I V + D+ L+ LNL++ + Sbjct: 129 GTLYVAGMAMGGPSRPQFANWALRQSRIDVLDASVIWEDELRKAPPLSLTQLNLRVVSPA 188 Query: 174 LNIIS--------PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 + L + G + + AK + + Sbjct: 189 WKGLIGHHMFGLRALPSAGSSAPIDIRGNLYGKDISQPEDWSGTVYAKLEGTDISAWRKW 248 Query: 226 LAYPIII-DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKIS 279 ++YP + + +G + + V+ + LSA + LSG Sbjct: 249 ISYPFDLYEGYGAARFWLQLDDGKPSNIVSDVILSDVKTRLSASSPQATLNHLSGRLSWD 308 Query: 280 DGNVRISRYKLQSILPNSSTDED---NKTKVS---QDEENLLNFSENGAESMHDLNETDF 333 + ++I N+ D + ++ E + D T Sbjct: 309 KHK-DGQEFTAENIKLNTPDGLDMQNGSISLRERWIKDKQWFEGRVRLDEILLDTLNT-- 365 Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKKE 359 F KN +I + + Sbjct: 366 FAGYIPLPKNIKQNLQEISPTGKLEN 391 >gi|299066863|emb|CBJ38058.1| Conserved protein of unknown function [Ralstonia solanacearum CMR15] Length = 1261 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 105/338 (31%), Gaps = 39/338 (11%) Query: 3 RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 RR+ +G+ V L+GA P + + E Q + + + + V KI + P+ Sbjct: 48 RRIGLGVLIFLVVFGLLGAVGGPPLLHY-----LAETQLSKYLERPVTVG---KIRLNPY 99 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I +++ + I L + A + + + ++ +D P + +++ Sbjct: 100 TLRLEIDQLHIAERDGKTPFIDIGHLHVNAAWSSVFRRGPVIEELKVDAPRVRIVRTAEQ 159 Query: 121 VSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 N+ K + + + + G I+ IDQ + + L + + Sbjct: 160 RFNFSDIIDKLTQPEVPPKPKSNEPARFVFANLQLNNGAIQFIDQPLGAQHTVDGLQIGV 219 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 P +D ++A D F A++ SL I+L L P Sbjct: 220 PFL---ASLPADVDIFVQPLLA---ARIDGAPLHFAGKTKPFAQSLESSLNIKLDGLELP 273 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 + G + + G + R+ G + V Sbjct: 274 RYL---GYVPGPLPVAVPQGKLTTD-LTIDFQKPRTGNPVLRVHGTAGLDGLEVT----- 324 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + + + + L+ + D Sbjct: 325 ---DAKKAPLVAAKQLRATLSDVRPLDNVYHLDALSLD 359 Score = 54.9 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 27/276 (9%), Positives = 82/276 (29%), Gaps = 30/276 (10%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + + + + + L + L + + +D ++ + G Sbjct: 315 TAGLDGLEVTDAKKA-PLVAAKQLRATLSDVRPLDNVYHLDALSLDGVRVDAVRAPDGSI 373 Query: 123 NWFQR--------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQV--YFLSDLN 166 N+ Q +T +V + K+ + + D + L DL+ Sbjct: 374 NFAQLGGKPAPEAKPAAPAPATQPKPLDVAVGKLQLANSSVHWRDATTQPAADLVLDDLH 433 Query: 167 LQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKIQ 222 ++ R L + L + + G++ +G+ + + ++ L+ Sbjct: 434 GDVAVRTLGGPTTLDVGAKLASGGTLNVKGSTSLEKHTGELELKLEAVKLAGIEPYLRQA 493 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL------ELSAKKSRLSGN- 275 P + G + ++ L L + + + +L + Sbjct: 494 DAPQLQNGALSADGKIALEFGADKFNVHAEPLVATLADLALAPATRNDTALRAKQLRADI 553 Query: 276 --FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 F ++ + ++ + + + +D T ++ Sbjct: 554 KSFDLAARTLALNEVRADGLQLDVLRKQDGSTVLTL 589 >gi|330993254|ref|ZP_08317190.1| AsmA family protein [Gluconacetobacter sp. SXCC-1] gi|329759656|gb|EGG76164.1| AsmA family protein [Gluconacetobacter sp. SXCC-1] Length = 828 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 103/348 (29%), Gaps = 41/348 (11%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIE 84 +D R G+++ + G + IHILP PS+ +D+ + G S E Sbjct: 33 LDPDSLRTRVIAAIEKQTGRQVRL-GALDIHILPAPSLSVRDVGLSDMAGGAYSDMLTAE 91 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK-------------STM 131 L + LL E+R+ D+ + P L+ + G +NW + Sbjct: 92 QLQASIGIMGLLHHELRLEDVRLTHPVLHLERTEAGEANWRLSPTGAQATARPDAAATQA 151 Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQV--YFLSDLNL--------QISARFLNIISPLS 181 V + + V + D+ S L +NL Q+ + Sbjct: 152 ASEWKVQVGSVRVSNADLDWDDRLSGSRGKVVLDHINLSGVDGAQPQLDVAGHGGGGSFT 211 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 + G++ T A K + PA A+ I + L GN+ Sbjct: 212 LSGHTGAINLASTAR-SGWPVALKAAFQSGGQPAGQLAVDGTIADPDHMKGYNVTLDGNV 270 Query: 239 FWNEKQPIY-------SGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR----ISR 287 + + SA + L + G V +S Sbjct: 271 ASLKAVESLLPGRSLPDVRRLSFRANVVDGSAAGSAGSTPLLNMLHLDTGAVDAGPYLSG 330 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335 LQ + ++ +D + SQ + +G + Sbjct: 331 LTLQGLSIDAPGPKDAVSIRSQGQWQGQGLKLSGTLGSLQQVDAAVTS 378 >gi|94271231|ref|ZP_01291914.1| AsmA [delta proteobacterium MLMS-1] gi|93450519|gb|EAT01673.1| AsmA [delta proteobacterium MLMS-1] Length = 949 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 44/330 (13%), Positives = 102/330 (30%), Gaps = 53/330 (16%) Query: 33 REDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRA 90 +E G+++ + G ++ + P + I + D +++ S+ Sbjct: 1 KERIAAMVYEQTGRELRIDGELEWGLWPRLRLAGDSITLGNAPDFGPEPFLELDSFSLAV 60 Query: 91 EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW------------FQRKSTMDMIHNVI 138 PL+ E+R+ + + HLN +++G+ NW + + Sbjct: 61 ATWPLIRSEVRLDLVEVSGLHLNLARNAEGIGNWEDLAGEPEPTAKPAAPGSPLPFAALA 120 Query: 139 LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD 198 L + ++ R+ D+ S Q + DLNLQI A L + +D Sbjct: 121 LGGVDIRDLRVDWHDESSGQRAAIYDLNLQIGALSLGEPIEMELD--------------- 165 Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS 258 + L G L ++ + Y+ A Sbjct: 166 --------------------FQAASNQPDLAASGQLQGTLVYDLRGRHYALQPLHASLDL 205 Query: 259 KLLNLELSAKKSRLSGNFKISDGN--VRISRYKLQSILP--NSSTDEDNKTKVSQDEENL 314 + + L G F++ + R+ ++L + ++ + D Sbjct: 206 SGPTVPGGQAELTLRGLFELDEKAGLARVDDFRLAGLGMLVGATMEMDGLHTDQPGCRGE 265 Query: 315 LNFSENGAESMHDLNETDFFEEEEKKNKND 344 + N + ++ E+ ++ + Sbjct: 266 IQADINDLVRVLEIFESPLAQQLSGVRERT 295 >gi|15604215|ref|NP_220730.1| outer membrane assembly protein (asmA) [Rickettsia prowazekii str. Madrid E] gi|3860907|emb|CAA14807.1| OUTER MEMBRANE ASSEMBLY PROTEIN (asmA) [Rickettsia prowazekii] Length = 835 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 48/370 (12%), Positives = 136/370 (36%), Gaps = 23/370 (6%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFESKIEGLS 87 +++ + + + + G IK+ +LP P++ +I++ +E + Sbjct: 29 NNYKGVLIDKVKEATNRNLTINGDIKLSLLPTPTISLSEIKLSSINGAKVPHLVSVEAVK 88 Query: 88 MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH------------ 135 PL G I V + + +P ++ + G +W S + Sbjct: 89 ASLRLFPLFRGVIEVALIELQKPTISLEVLDNGQKSWQLYISNNNNTINNNNTVQSNYTQ 148 Query: 136 -----NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 +++ + +KGG++ I++ +++++ +L ++ + I +++++++ + Sbjct: 149 TVLELPILISHLKIKGGKVIYIEKNNEKIFNDINLETKMKSIKGPIDFTIALNALQQQIH 208 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250 +G K N I K ++ ++ GN + Sbjct: 209 IDGHVKEIGKIIPLSTNINLAGAKIKIDGKFDSKNNSFIGNANIKGNTKTLGMPYDLNND 268 Query: 251 FSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 +++ + N+ + + +++ N + R L+S + + + K + + Sbjct: 269 YTLTMSISACSKNINIRDARLHYPNIELLANTNYDMERNNLESNIIVNPGNLITKIQSNL 328 Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369 D+ N+L + + + D + E N+ L + I+ K + N + Sbjct: 329 DKTNIL-LQADSLKPILDALKLKTDELPPIINQKLILTTNVIRDPQAIKLQNINLSATNS 387 Query: 370 QENFSGDKMI 379 N +G+ ++ Sbjct: 388 --NITGEIVL 395 >gi|292571955|gb|ADE29870.1| Outer membrane assembly protein [Rickettsia prowazekii Rp22] Length = 829 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 48/370 (12%), Positives = 136/370 (36%), Gaps = 23/370 (6%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFESKIEGLS 87 +++ + + + + G IK+ +LP P++ +I++ +E + Sbjct: 29 NNYKGVLIDKVKEATNRNLTINGDIKLSLLPTPTISLSEIKLSSINGAKVPHLVSVEAVK 88 Query: 88 MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH------------ 135 PL G I V + + +P ++ + G +W S + Sbjct: 89 ASLRLFPLFRGVIEVALIELQKPTISLEVLDNGQKSWQLYISNNNNTINNNNTVQSNYTQ 148 Query: 136 -----NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 +++ + +KGG++ I++ +++++ +L ++ + I +++++++ + Sbjct: 149 TVLELPILISHLKIKGGKVIYIEKNNEKIFNDINLETKMKSIKGPIDFTIALNALQQQIH 208 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250 +G K N I K ++ ++ GN + Sbjct: 209 IDGHVKEIGKIIPLSTNINLAGAKIKIDGKFDSKNNSFIGNANIKGNTKTLGMPYDLNND 268 Query: 251 FSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 +++ + N+ + + +++ N + R L+S + + + K + + Sbjct: 269 YTLTMSISACSKNINIRDARLHYPNIELLANTNYDMERNNLESNIIVNPGNLITKIQSNL 328 Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369 D+ N+L + + + D + E N+ L + I+ K + N + Sbjct: 329 DKTNIL-LQADSLKPILDALKLKTDELPPIINQKLILTTNVIRDPQAIKLQNINLSATNS 387 Query: 370 QENFSGDKMI 379 N +G+ ++ Sbjct: 388 --NITGEIVL 395 >gi|294341420|emb|CAZ89837.1| conserved hypothetical protein [Thiomonas sp. 3As] Length = 774 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 28/273 (10%), Positives = 91/273 (33%), Gaps = 15/273 (5%) Query: 18 VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG 77 G + L D ++ + + + + G I+I + P ++ + +++ Sbjct: 39 GGMSILLLTFDPNQYKATLIQVVQEREHRTLTLPGTIEITLFPPLTLRTGPFSLSERDSP 98 Query: 78 SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-------QRKST 130 + ++ + L + + LL ++ V + + +P ++ ++G N+ + Sbjct: 99 AVFARADDLRLHLDLFALLRRKLVVDRVVMIKPQIHVARDAQGRLNFADLLPDSKPESAP 158 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID------- 183 + + ++ V+ G + D ++ L L++ +S ++ Sbjct: 159 PRSPLGLSVHRLQVEQGVLFYDDDKAKLHGQLDGLDVGLSGLDGGNAGAFHLETTARFVQ 218 Query: 184 -SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242 ++ + G D + + +T + + + + L W Sbjct: 219 PALATRIALRGKLLADPAQHSVALTDLALSAQGDVPGLKAMQAQLSADQLGLRTGSLWAL 278 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 + + + + L+ ++S G+ Sbjct: 279 TARQWRIKTTGRTESGENLSAQISLPTLEAKGD 311 >gi|171317999|ref|ZP_02907172.1| protein of unknown function DUF748 [Burkholderia ambifaria MEX-5] gi|171096842|gb|EDT41717.1| protein of unknown function DUF748 [Burkholderia ambifaria MEX-5] Length = 1267 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 96/293 (32%), Gaps = 31/293 (10%) Query: 3 RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 RR+ +G+ + L+G F P I R E+Q + + + ++ +I + P+ Sbjct: 26 RRIGLGVLIFIVLFGLLGFFAAPPLI-----RHIAEQQLSQQLERPSTIQ---RIALNPY 77 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 ++ + + + ++ I+ L +R + L G V ++ +D P + Sbjct: 78 TLNLEAEGVHVGERGGQGGFIDIDKLVVRPSWSSLFRGAPIVNEVRVDSPRFHIVRYDAQ 137 Query: 121 VSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 N+ + I V GRI D+ ++ + + + L I Sbjct: 138 RFNFTDLIEKFSKPSPKPESKPTQFSVSNIQVNDGRIDFDDRLLNEKHVVDNWTLGIPFI 197 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 V + FD A A+++ + ++ L P +I Sbjct: 198 ATLPSKTDIF------VQPKLRARFDGSPIAIDGKTKPFAQSRESEVALKFDRLDVPKLI 251 Query: 233 D-LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 L + S ++ + R+SG ++D V Sbjct: 252 SYAPAKLPVIVTSGLLSSDLAL------NFVMSGDTPALRVSGTVDLNDAKVT 298 Score = 43.7 bits (101), Expect = 0.054, Method: Composition-based stats. Identities = 45/389 (11%), Positives = 102/389 (26%), Gaps = 75/389 (19%) Query: 40 ATLIVGKKIAVKGGIKIHILPFPSVF----FKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95 + + + G P V D ++ + G+ + A L Sbjct: 267 LSSDLALNFVMSGDT-----PALRVSGTVDLNDAKVTGRA-SEPLFAARGVHVAAAGLEP 320 Query: 96 LSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH-------------------- 135 L + ++ IDQP ++ +GV N + Sbjct: 321 LRNVLHFDEIRIDQPVVDLSRDKQGVLNVEKLAGQPAAAPKAAAGKPAASGAAASTAAAT 380 Query: 136 ---------------------NVILEKIHVKGGRIKIID--QESDQVYFLSDLNLQISAR 172 ++ + + GG I + D + L+ L + Sbjct: 381 AAASGASGAKAEAAAKEAPPLDLTIRHFAIDGGTINVDDRVPATPTAMSLTKLAATLDGF 440 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 L +P ++ S+ G + S A+ A++L Sbjct: 441 TLQGKTPAKY-TLSTSLSHGGDIKAEGAFSVAAKQADTKLTVDALALPA----------- 488 Query: 233 DLFGNLFWNEKQPIYSGVF-SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 L L + + G + + L A+ + + V K Sbjct: 489 -LQPYLGEATRARVLDGTLGATVNAKADWGKTPLDAQVA--DSTVSLKSLKVATPDAKAP 545 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH------DLNETDFFEEEEKKNKNDD 345 +I+ ++ + K V+ + + G ++ E + Sbjct: 546 AIVLPDASAKIAKVDVAARTAEIASVDATGLALDVKRLKDGKIDLAALAEPAQAAVPKRT 605 Query: 346 LKKDDIQYSVNKKEEKDNSHDKENQENFS 374 + + + + D + K++ NF+ Sbjct: 606 VARKAEAAAPSWHYRIDALNVKDSAANFT 634 >gi|94266043|ref|ZP_01289763.1| Uncharacterized protein involved in outer membrane biogenesis-like [delta proteobacterium MLMS-1] gi|93453403|gb|EAT03828.1| Uncharacterized protein involved in outer membrane biogenesis-like [delta proteobacterium MLMS-1] Length = 415 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 103/288 (35%), Gaps = 7/288 (2%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 + R L+ LF ++ + + + + ER A +G ++ + G + I LP Sbjct: 6 IRRTWLVATVGLFIIIALILAALLAALQSDAAKARLERTAADALGMEVKIGGRLGIAFLP 65 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 +V D+R+ + ++ + E + + LPLL E+R+ + ++ + +G Sbjct: 66 DLAVTLHDVRLGEHDN--ELAWAERVRLGVGLLPLLQREVRINQLTVENSRITIQRDPEG 123 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA-RFLNIISP 179 N+ + + + L I + ++ +DQ+S + + L + R Sbjct: 124 RFNFQSPAPNGESLAALELPTIFLTAATLRYVDQQSGEQFAAEGCQLTVPELRLAEGEKS 183 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI---SLKIQLFPLAYPIIIDLFG 236 ++++ ++ + + ++ + L ++LF + Sbjct: 184 ALLENLTVRAELNCQTIRRDELRLDDLRLSVVGRDGSFEVEPLSLELFGARGEGALLADF 243 Query: 237 NLFWNEKQPIYSG-VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 + Y F VA F L E++ L+ + + Sbjct: 244 TGPAPNYEIRYFLPQFRVADFFQVLTQEEIATGTMDLTVELAMQGETM 291 >gi|308049193|ref|YP_003912759.1| AsmA family protein [Ferrimonas balearica DSM 9799] gi|307631383|gb|ADN75685.1| AsmA family protein [Ferrimonas balearica DSM 9799] Length = 610 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 39/347 (11%), Positives = 101/347 (29%), Gaps = 40/347 (11%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESK 82 F D F+ + G+++ + G I + P + +++ Sbjct: 24 FFFDLNSFKGPIADKVKQATGRELVIGGDIGWSVYPTLGLELAQVQLGNLPGEQLPPLLS 83 Query: 83 IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKI 142 +E S+ LPLL E++V ++ + HL + G S+ Sbjct: 84 VEQASVGVALLPLLKRELQVEELAVSGVHLELVTLADGRSSLTGLGGEGA---------- 133 Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202 + + +D + R++ ++ +I A G D + Sbjct: 134 -----------AKPSEAAPATDSSAAAPKRWVLGHLAVNDLTIHNDNRAAGA---DQTLA 179 Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262 ++ +A L++Q+ + + + Sbjct: 180 IKQLELARIEPERAAPLRLQVEVGDGDLAVSTQAEAMLTVSADFSRFQIDDWRQQLEAKG 239 Query: 263 LELSAKKSRLS----GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE-ENLLNF 317 + A+ LS + +++ ++ + + + + + + + Sbjct: 240 SAIGAQPLALSLAWDADLNLAEQQFVVTNLEFKL----ADFILNGEAQANLAGVRPAFQL 295 Query: 318 SENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364 + G D + + +K D + + + +EE D S Sbjct: 296 TAKGNALNLDP-----WLPADIADKGTDKSEPAPESAPAPQEEPDLS 337 >gi|240850043|ref|YP_002971436.1| AsmA family protein [Bartonella grahamii as4aup] gi|240267166|gb|ACS50754.1| AsmA family protein [Bartonella grahamii as4aup] Length = 626 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 52/384 (13%), Positives = 116/384 (30%), Gaps = 64/384 (16%) Query: 1 MLRRVLIGLGFLFSVVL----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 M R++ L +F ++ VG +P I R + + G + ++ ++ Sbjct: 1 MRIRIIKFLSGIFITIIFLFGVGILVLPYLISTDAIRIRLAQDLSAWTGYNVQLRDPPRL 60 Query: 57 HILPFPSVFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 H+ P+P F + + K +D + + E + + + LL G + + I +P Sbjct: 61 HLFPYPKAFLSGVTLTSKMDDVAPLMEAESIEVDLSVVDLLWGHVSFSETRIMRPQFVME 120 Query: 116 LSSKGVSNWFQRKSTMDMIHNVIL------------------------EKIHVKGGRIKI 151 K ++++F R S + + +I +K G + Sbjct: 121 KPVKTIADFFDRFSRSQGALGLAIRNTREILKHNPEHPEIEHLLKQPFGRIVIKNGVLVY 180 Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP 211 D S ++ LN + L V + + + I A+ Sbjct: 181 HDSFSGMAEKITGLN-----------ATLDWPESTQEVRLRADARWRGEFTKLSIDASQA 229 Query: 212 ---AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268 ++ L + I L + I+ G S+ Sbjct: 230 LPLLAGGKSHIRASLNSVRGGITFTGKARLS---EYYIFDGKVSMR--SPGWNQTLSWVG 284 Query: 269 KSRLSG-----------NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE-ENLLN 316 ++ G +F +++++ N+ K+ + + Sbjct: 285 GNQFWGHKFKIPIVWESHFLAQPMHIQMNNVTFTMGKANA----RGALKLDFQDYVPNVM 340 Query: 317 FSENGAESMHDLNETDFFEEEEKK 340 S + L + FF ++K Sbjct: 341 GSLAFDKLDLRLLGSMFFSGKKKN 364 >gi|269104991|ref|ZP_06157687.1| AsmA protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268161631|gb|EEZ40128.1| AsmA protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 1312 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 39/319 (12%), Positives = 101/319 (31%), Gaps = 11/319 (3%) Query: 14 SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73 + +G + + +D T ++ + T + ++ ++G I + + P + + I Sbjct: 40 VAIGIGVLSYGVTLDLTPHKQKISQWLTKNLARETKIEGDIALTLSFSPEIDINKLTIGN 99 Query: 74 KE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM 131 E S + LPLL + + + +D H+ +G NW Sbjct: 100 TEAMKWQPMLSSGHASAKVSLLPLLRNTLEIDYLKLDNTHVELNRDYQGKPNWVF----N 155 Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA 191 + K +KI D + + +S L+ Q F + LS+ + + Sbjct: 156 SSPKVTTSDDKTSKPLTLKITDTITAKDVSVSYLDQQTGQYFSAAVEQLSL-TKPDQWLL 214 Query: 192 EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ---PIYS 248 + G + F +T + + + +++ ++ Sbjct: 215 KAQGFVQGQSYDFSLTGDLESIINHQQGHLVAAGEFIGARLNIDADIQPWRTGVTHANID 274 Query: 249 GVFSVAGDFSKLLNLELSAKKS-RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + L+L++ +++ S + +++ K+ S + +S Sbjct: 275 LDWHDTAPIKSFLDLDIGPAAPLKITTKLSASHEGIGLTKLKIDSPVTQASGHLVFALAK 334 Query: 308 SQDEENLLNFSENGAESMH 326 N ++ + Sbjct: 335 KGQPLNYIDGKLDIPLIDL 353 >gi|71908942|ref|YP_286529.1| hypothetical protein Daro_3330 [Dechloromonas aromatica RCB] gi|71848563|gb|AAZ48059.1| Conserved hypothetical protein 2099 [Dechloromonas aromatica RCB] Length = 1307 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 114/350 (32%), Gaps = 26/350 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWT--DFREDFERQATLIVGKKIAVKGGIKIHI- 58 LR + + + V V + + D+R E+ A+ VG+ + + G I+ H Sbjct: 40 LRILGWSVLAAWLVFAVLVLALRYTVLPKIADYRVQIEQAASRAVGQPVTI-GRIEAHWQ 98 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 P + D+ + ++ + + + L + + D P L+ + Sbjct: 99 GLNPDLVLDDVVLADRQG-VPAFSLARVEGVLSWQTLWRLRPTLALLAFDGPVLHVRRET 157 Query: 119 KGV-----SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISAR 172 G + + ++I ++ I D+ L DL + Sbjct: 158 NGKLTVAGMDTEGESDPAFAEWVLEQKRIRIRDATIVWDDRLRKAPPLVLEDLQFALDNS 217 Query: 173 FLNIISPLSI---DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 LS D++ + G D + ++ + L + YP Sbjct: 218 GRRHRFGLSAAPPDALAARIDIRGEVKGDLGEALDNLSGKVFVELDYADLAGWQPWVDYP 277 Query: 230 III-DLFGNLFWNEKQPIYSGVFSVA--------GDFSKLLNLELSAKKSRLSGNFKISD 280 + + G L +G + KL L+L++ + RL G +K + Sbjct: 278 VHLPQGRGALRIWGDIADGAGKLTADVALEELRISLGRKLPELDLASMRGRLEGRYKADE 337 Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL-NFSENGAESMHDLN 329 ++ +K++ + + KV ++ S N + S DL+ Sbjct: 338 --WALAGHKVELLTQDGIRIAPTDFKVEWRQDPKSAAISGNASASFLDLS 385 >gi|53716222|ref|YP_106394.1| hypothetical protein BMAA1845 [Burkholderia mallei ATCC 23344] gi|121597648|ref|YP_990450.1| hypothetical protein BMASAVP1_0850 [Burkholderia mallei SAVP1] gi|124381349|ref|YP_001024943.1| hypothetical protein BMA10229_1140 [Burkholderia mallei NCTC 10229] gi|126446211|ref|YP_001079285.1| hypothetical protein BMA10247_A2113 [Burkholderia mallei NCTC 10247] gi|254176140|ref|ZP_04882798.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399] gi|254203383|ref|ZP_04909744.1| conserved hypothetical protein [Burkholderia mallei FMH] gi|254356070|ref|ZP_04972347.1| conserved hypothetical protein [Burkholderia mallei 2002721280] gi|52422192|gb|AAU45762.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344] gi|121225446|gb|ABM48977.1| conserved hypothetical protein [Burkholderia mallei SAVP1] gi|126239065|gb|ABO02177.1| conserved hypothetical protein [Burkholderia mallei NCTC 10247] gi|147745622|gb|EDK52701.1| conserved hypothetical protein [Burkholderia mallei FMH] gi|148025053|gb|EDK83222.1| conserved hypothetical protein [Burkholderia mallei 2002721280] gi|160697182|gb|EDP87152.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399] gi|261826269|gb|ABN00164.2| conserved hypothetical protein [Burkholderia mallei NCTC 10229] Length = 1307 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 86/287 (29%), Gaps = 27/287 (9%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66 G+G L +V G F R E+Q + + + + +I P+ + Sbjct: 28 GVGALIVLVAFGLLG--FFAAPPLIRHIAEQQLSQQLERPATIA---RIAFNPYTLRLEA 82 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 83 DGVRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTD 142 Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + I V GRI+ D+ + + + + I Sbjct: 143 LVDKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSK 202 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237 V + D A A+++ S+ ++ L P ++ Sbjct: 203 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTK 256 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 L + + S V + R+SG ++D V Sbjct: 257 LPVDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297 >gi|126442637|ref|YP_001061416.1| hypothetical protein BURPS668_A0410 [Burkholderia pseudomallei 668] gi|126222128|gb|ABN85633.1| conserved hypothetical protein [Burkholderia pseudomallei 668] Length = 1321 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 86/287 (29%), Gaps = 27/287 (9%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66 G+G L +V G F R E+Q + + + + +I P+ + Sbjct: 28 GVGALIVLVAFGLLG--FFAAPPLIRHIAEQQLSQQLERPATIA---RIAFNPYTLRLEA 82 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 83 DGVRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTD 142 Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + I V GRI+ D+ + + + + I Sbjct: 143 LVDKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNAKHVVDQWTVGIPFIATLPSK 202 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237 V + D A A+++ S+ ++ L P ++ Sbjct: 203 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTK 256 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 L + + S V + R+SG ++D V Sbjct: 257 LPVDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297 >gi|167896831|ref|ZP_02484233.1| hypothetical protein Bpse7_24025 [Burkholderia pseudomallei 7894] Length = 368 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68 G + LV + F R E+Q + + + + +I P+ + Sbjct: 28 GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 85 VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144 Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + I V GRI+ D+ + + + + I Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239 V + D A A+++ S+ ++ L P ++ L Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + S V + R+SG ++D V Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297 >gi|76817706|ref|YP_336915.1| hypothetical protein BURPS1710b_A1758 [Burkholderia pseudomallei 1710b] gi|76582179|gb|ABA51653.1| putative membrane protein [Burkholderia pseudomallei 1710b] Length = 1348 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68 G + LV + F R E+Q + + + + +I P+ + Sbjct: 59 GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 115 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 116 VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 175 Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + I V GRI+ D+ + + + + I Sbjct: 176 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 235 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239 V + D A A+++ S+ ++ L P ++ L Sbjct: 236 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 289 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + S V + R+SG ++D V Sbjct: 290 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 328 >gi|34496902|ref|NP_901117.1| hypothetical protein CV_1447 [Chromobacterium violaceum ATCC 12472] gi|34102758|gb|AAQ59122.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 1097 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 44/361 (12%), Positives = 117/361 (32%), Gaps = 28/361 (7%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDI 69 + +++ + ++ A G+++A+ ++ I+P+ + + Sbjct: 27 AIACALVLAFWAFLGLAAPHLLQKAAADWARKH-GRQLAIS---EVRIVPWSMELTLDGV 82 Query: 70 RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF---- 125 + + + + + + A +L G + + +D P L G+ NW Sbjct: 83 SLREGDG-KPLFQARRIYLNAALYAVLMGRWQASEFLLDTPQLWLERDKDGLWNWGRFVA 141 Query: 126 --------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 + + + + + L I ++ G+I+I D + + + +S L+ + Sbjct: 142 DISGPPKLEDGTAPEKLPRLKLNAIDLRNGQIRISDHLAGHHGNFRLMPINLSLNNLSTL 201 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-PLAYPIIIDLFG 236 ++ + G ++ + ++ A + + L + G Sbjct: 202 EENGRYTLHAEMEGGGRFDWQGSMRLQPLQSSGEASMQGLPLASAWDYVRPHFAAAKPDG 261 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 L N + F ++G L LSA L DG + + ++ + Sbjct: 262 ELSVNARY-----QFDMSGASPDLTISSLSASLKGLKLRAPAGDGMLDLPELRVDGGALD 316 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESM----HDLNETDFFEEEEKKNKNDDLKKDDIQ 352 S KV + L + + + + + K +K D+++ Sbjct: 317 LSRSLLTVAKVELNHGKLAASRDAAGQLDWLRALPPTKPEAKPAQPAKPSPWIVKIDNLR 376 Query: 353 Y 353 + Sbjct: 377 F 377 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 80/291 (27%), Gaps = 34/291 (11%) Query: 39 QATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG 98 + + G + + V + + + + LS+ + Sbjct: 603 ALSADLKLNATSAG--RWSLGGQLKVA--KMALQEPGEPLPLLGWNTLSLSQLQAQGMPL 658 Query: 99 EIRVFDMYIDQPHLNFYLSSKGVSNWF---------QRKSTMDMIHNVILEKIHVKGGRI 149 ++ + D+ +DQP L + NW + V + IHV+ G + Sbjct: 659 KVSINDVRLDQPRARLILDPQRNLNWQKIFARQPAKPASGNSAPLPQVDVHSIHVQNGAV 718 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK---RSAFKI 206 + D + +L+ S + L+ + +G + +G + + R A Sbjct: 719 EFADHGMTPDFATRMHHLRGSIQNLSTRA-----GGRGRITLDGAVDQYGEVKVRGALSP 773 Query: 207 TANFPAKNKAISLKIQLFPLAYPIIIDLFGN----------LFWNEKQPIYSGVFSVAGD 256 + + + + P ++ G L + G + D Sbjct: 774 MSPTDSTDILLDFHNLALNNLNPYSMNFAGWQVKDGKLSLELRYLLDHRQLKGENRIVID 833 Query: 257 FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ---SILPNSSTDEDNK 304 +L K L ++ R L + + + Sbjct: 834 SIQLGEELKGDKSPHLPLKLAVALLEDSDGRIDLDLPVAGSLDDPQFSYGQ 884 >gi|237745441|ref|ZP_04575921.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gi|229376792|gb|EEO26883.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 1099 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 96/344 (27%), Gaps = 27/344 (7%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68 L ++ F +P + + A +++ V+ KI + PF +V + Sbjct: 28 ASLIVAIVAAVFFLPGIV-----QSKAREFAAENFNRELTVQ---KIELDPFRLTVRLEG 79 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ-- 126 +R+ + + L + + + + P ++ G N Sbjct: 80 VRLSEPGQERAFVSFDHLFVEFSPRTFSEFNPVIRQIRLVNPTVHIVRRQSGKYNVDDMV 139 Query: 127 -----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + I ++ G I++ D + + +LN+ I Sbjct: 140 TYLSKPREDDAGRTLFSINNIRIENGTIRVDDDVRKKRLLIEELNVGIPFIANMP----- 194 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 ++ V + + + K ++ I+L L P + G L ++ Sbjct: 195 -AEVEVFVPFSIRARINRDKIELVGKSRPVLNKKDGTIGIKLDKLDLPTYL---GYLPFD 250 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 + SG S E + + G+ + S + Sbjct: 251 PGFKLKSGKLSAD-LDMTFAKREGDKRPIFVEGDVVFHSLRLTESD-NAHLLDIPELKIG 308 Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 K+ + + L S + N+ + E Sbjct: 309 IGKSDLVSGKIKLNRVSVENPRVFLERNKDGQWNFERLVKAGKK 352 Score = 55.3 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 46/330 (13%), Positives = 100/330 (30%), Gaps = 52/330 (15%) Query: 46 KKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDM 105 + I V+G V F +R+ + ++ I L + L+SG+I++ + Sbjct: 276 RPIFVEGD----------VVFHSLRLTESDNA-HLLDIPELKIGIGKSDLVSGKIKLNRV 324 Query: 106 YIDQPHLNFYLSSKGVSNW-----------------FQRKSTMDMIHNVILEKIHVKGGR 148 ++ P + + G N+ K+ V L++ V GG+ Sbjct: 325 SVENPRVFLERNKDGQWNFERLVKAGKKPAEKTGTAENEKTASRRTLAVDLKQFVVNGGQ 384 Query: 149 IKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208 + +D+ ++ +S N ++ L++ ++ V R + Sbjct: 385 LHFLDRAYNRPVNISARNFGLNVVNLSLDVSGRNAAVDSVVS-------TGTRITLVHSM 437 Query: 209 NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268 K ++ A D G F + I N +++ Sbjct: 438 PELLDRLREKDKAKVAQEAMGTAADSTGFHFRIRRAAIKD-------WSLSFENRQVAQP 490 Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328 + S N+ S+ N K N + + ++ D+ Sbjct: 491 IITRVSRLEASAENLS------DSLEKNVPLFMQAKVNDRGAIVVKGNIAVSPLKADLDM 544 Query: 329 N----ETDFFEEEEKKNKNDDLKKDDIQYS 354 + + F + N LK+ D+ Sbjct: 545 DVREVDIRFIQPYIDSYVNLSLKRADMSVK 574 >gi|115359570|ref|YP_776708.1| hypothetical protein Bamb_4825 [Burkholderia ambifaria AMMD] gi|115284858|gb|ABI90374.1| protein of unknown function DUF748 [Burkholderia ambifaria AMMD] Length = 1268 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 95/293 (32%), Gaps = 31/293 (10%) Query: 3 RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 RR+ +G+ + L+G F P I R E+Q + + + ++ +I + P+ Sbjct: 26 RRIGLGVLIFIVLFGLLGFFAAPPLI-----RHIAEQQLSQQLDRPSTIQ---RIALNPY 77 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 ++ + + ++ I+ L +R + L G V ++ +D P + Sbjct: 78 TLNLEADGVHVGERGGQGGFIDIDKLVVRPSWSSLFRGAPIVNEVRVDSPRFHIVRYDAQ 137 Query: 121 VSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 N+ + I V GRI D+ ++ + + + L I Sbjct: 138 RFNFTDLIEKFSKPSPKPESKPTQFSVSNIQVNDGRIDFDDRLLNEKHVVDNWTLGIP-- 195 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 V + FD A A+++ + ++ L P +I Sbjct: 196 ----FIATLASKTDIFVQPKLRARFDGSPIAIDGKTKPFAQSRESEVALKFDRLDVPKLI 251 Query: 233 D-LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 L + S ++ + R+SG ++D V Sbjct: 252 SYAPAKLPVIVTSGLLSSDLTL------NFVMSGDTPTLRVSGTVDLNDAKVT 298 Score = 46.8 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 44/361 (12%), Positives = 101/361 (27%), Gaps = 64/361 (17%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 +V D ++ + G+ + A L L + ++ +DQP ++ +GV Sbjct: 289 TVDLNDAKVTGRA-SEPLFAARGVHVAAAGLEPLRNVLHFDEIRLDQPVVDLARDKQGVL 347 Query: 123 NWF-----------------------------------------QRKSTMDMIHNVILEK 141 N + + ++ + Sbjct: 348 NVEKLAGQPAAAPKAAAGKPAASGAAASTATATAAASGASGAKAETAAKEAPPLDLTIRH 407 Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201 + GG I + D+ +S + + L +++G A+ T + R Sbjct: 408 FAIDGGTINVDDRVPATPTAMS---------LTKLAATLDGFTLQGKTPAKYTLSTSLSR 458 Query: 202 SA-FKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF-SVAGDFSK 259 K F K K+ + LA P L L + + G + + Sbjct: 459 GGDVKAEGAFSVAAKQADTKLTVDALALPA---LQPYLGEATRARVLDGTLGATVNATAD 515 Query: 260 LLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319 L A+ + + + K +I+ ++ + K V+ + + Sbjct: 516 WGKTPLDAQIA--DSTVSLKSLKLATPDAKAPAIVLPDASAKIAKVDVATRTAEIASVDA 573 Query: 320 NGAESMH------DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENF 373 G ++ E + + + + D + K++ NF Sbjct: 574 TGLALDVKRLKDGKIDLAALAEPAQAAVPKRTVARKAEAAAPTWHYRIDALNVKDSAANF 633 Query: 374 S 374 + Sbjct: 634 T 634 >gi|167741199|ref|ZP_02413973.1| hypothetical protein Bpse14_24241 [Burkholderia pseudomallei 14] Length = 370 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68 G + LV + F R E+Q + + + + +I P+ + Sbjct: 28 GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 85 VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144 Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + I V GRI+ D+ + + + + I Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239 V + D A A+++ S+ ++ L P ++ L Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + S V + R+SG ++D V Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297 >gi|291614553|ref|YP_003524710.1| hypothetical protein Slit_2095 [Sideroxydans lithotrophicus ES-1] gi|291584665|gb|ADE12323.1| conserved hypothetical protein [Sideroxydans lithotrophicus ES-1] Length = 1273 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 102/321 (31%), Gaps = 20/321 (6%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPS 63 +L+ + ++ + +P D + E A++ +G+ + + G I+ P Sbjct: 25 LLLAIAGALVLLTLRYRILP---DIERYHEQITAAASVAIGQPLHI-GRIEADWDGLRPR 80 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 + +++I K+ + L + L + E+R + ID P L+ ++G Sbjct: 81 LLLSEVQILDKQGHV-ALSLPRLENTVAWTSLFTAELRFQRLEIDSPDLSVRRDAQGHWF 139 Query: 124 WFQRK-------STMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLN 175 + + ++ GRI D + L ++L I RF Sbjct: 140 VAGIPLEGQSAEGPDSADWLLHQSNVVIRDGRITWQDDLRGAPLLALEHVDLSIDNRFGR 199 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 + + + T + + + LA+ + L Sbjct: 200 HRFAVLASA---PERLASRLDVRGNFYGDSFTDMSDWRGQLYTQLDYADVLAWKPWVSLP 256 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS---GNFKISDGNVRISRYKLQS 292 + F S ++ L+ ++RLS + + RI ++L+ Sbjct: 257 NAFKHGKGALRMWLGFEQGQLSSVDADVALAGVRARLSEELPQLDLKEMRGRIGWHQLER 316 Query: 293 ILPNSSTDEDNKTKVSQDEEN 313 ++ K + + + Sbjct: 317 GFEVNTQRLALKMRDGFELKP 337 >gi|167913521|ref|ZP_02500612.1| hypothetical protein Bpse112_23740 [Burkholderia pseudomallei 112] Length = 374 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68 G + LV + F R E+Q + + + + +I P+ + Sbjct: 28 GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 85 VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144 Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + I V GRI+ D+ + + + + I Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239 V + D A A+++ S+ ++ L P ++ L Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + S V + R+SG ++D V Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297 >gi|167826764|ref|ZP_02458235.1| hypothetical protein Bpseu9_24020 [Burkholderia pseudomallei 9] Length = 373 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68 G + LV + F R E+Q + + + + +I P+ + Sbjct: 28 GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 85 VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144 Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + I V GRI+ D+ + + + + I Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239 V + D A A+++ S+ ++ L P ++ L Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + S V + R+SG ++D V Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297 >gi|167848280|ref|ZP_02473788.1| hypothetical protein BpseB_23631 [Burkholderia pseudomallei B7210] Length = 366 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68 G + LV + F R E+Q + + + + +I P+ + Sbjct: 28 GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 85 VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144 Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + I V GRI+ D+ + + + + I Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239 V + D A A+++ S+ ++ L P ++ L Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + S V + R+SG ++D V Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297 >gi|254254715|ref|ZP_04948032.1| hypothetical protein BDAG_04028 [Burkholderia dolosa AUO158] gi|124899360|gb|EAY71203.1| hypothetical protein BDAG_04028 [Burkholderia dolosa AUO158] Length = 1278 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 99/291 (34%), Gaps = 28/291 (9%) Query: 3 RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 RR+ IG+ + L+G F P I R E+Q + + + +++ +I + P+ Sbjct: 26 RRIGIGILIFIVLFGLLGFFAAPPLI-----RHVAEQQLSRQLDRPASIQ---RIALNPY 77 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 ++ I + ++ I L +R + L G V ++ +D P Sbjct: 78 TLNLEADGIHVGERGGQGDFIDIGKLVVRPSWSSLFRGAPIVDEVRVDAPRFRIVRYDAQ 137 Query: 121 VSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 N+ D + + I + GRI D+ ++ + + + L I Sbjct: 138 RFNFTDLIEKFSTPSKPDDKPAHFSVSNIQINDGRIDFDDRLLNEKHVVDNWMLGIPYVA 197 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 V + FD A A+++ + +Q L P +I Sbjct: 198 TLPSKTDIF------VEPKLRARFDGSPIAIDGKTKPFAQSRESEIALQFDRLDVPKLIS 251 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + SG+ S + K + + R+SG ++D V Sbjct: 252 ---YAPAKLPVVVTSGLLS-SNLTLKFV-MSGDTPTLRVSGTVDLNDAKVT 297 Score = 42.2 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 43/340 (12%), Positives = 88/340 (25%), Gaps = 78/340 (22%) Query: 40 ATLIVGKKIAVKGGIKIHILPFPSVF----FKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95 + + K + G P V D ++ G+ + A L Sbjct: 266 LSSNLTLKFVMSGDT-----PTLRVSGTVDLNDAKVTGLA-SEPLFAARGVHVAAAGLEP 319 Query: 96 LSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM---------------------- 133 L + ++ +D+P ++ +GV N + + Sbjct: 320 LRNVLHFDEIRLDRPVVDLSRDKQGVLNVEKLAAAPTDASGKRAASAAAAASGASTASTA 379 Query: 134 -----------------------------IHNVILEKIHVKGGRIKIID--QESDQVYFL 162 ++ + + GG I I D L Sbjct: 380 STASTASTASASAADAASGAKAAAAAKTPPLDLTIRHFAIDGGTINIDDRMPAPPTAMSL 439 Query: 163 SDLNLQISARFLNIISPLSID-----SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217 + L + L +P S G V AEGT + KR+ K+ + A Sbjct: 440 TKLAATLDGFTLQGNAPAKYTLSTSLSRGGDVKAEGTFSVAAKRADTKLNVDALALPALQ 499 Query: 218 SL---KIQLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLLNLELSAKKSRLS 273 + L + + + W + +++ KL + A L+ Sbjct: 500 PYLGDATRARVLDGTLGATVDAKVDWGKTPLDAQVADSTISVKSLKLAAPDAKAPAIALA 559 Query: 274 ------GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 ++ I+ + + +D + V Sbjct: 560 DATAKIAKVDVAARVAEIASVDANGLALDVKRLKDGRIDV 599 >gi|172064380|ref|YP_001812031.1| hypothetical protein BamMC406_5371 [Burkholderia ambifaria MC40-6] gi|171996897|gb|ACB67815.1| protein of unknown function DUF748 [Burkholderia ambifaria MC40-6] Length = 1271 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 95/293 (32%), Gaps = 31/293 (10%) Query: 3 RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 RR+ +G+ + L+G F P I R E+Q + + + ++ +I + P+ Sbjct: 26 RRIGLGVLIFIVLFGLLGFFAAPPLI-----RHIAEQQLSQQLDRPSTIQ---RIALNPY 77 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 ++ + + ++ I+ L +R + L G V ++ +D P + Sbjct: 78 TLNLEADGVHVGERGGQGGFIDIDKLVVRPSWSSLFRGAPIVNEVRVDSPRFHIVRYDAQ 137 Query: 121 VSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 N+ + I V GRI D+ ++ + + + L I Sbjct: 138 RFNFTDLIEKFSKPSPKPESKPTQFSVSNIQVNDGRIDFDDRLLNEKHVVDNWTLGIP-- 195 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 V + FD A A+++ + ++ L P +I Sbjct: 196 ----FIATLASKTDIFVQPKLRARFDGSPIAIDGKTKPFAQSRESEVALKFDRLDVPKLI 251 Query: 233 D-LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 L + S ++ + R++G ++D V Sbjct: 252 SYAPAKLPVIVTSGLLSSDLTL------NFVMSGDTPTLRVAGTIDLNDAKVT 298 Score = 41.4 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 45/361 (12%), Positives = 101/361 (27%), Gaps = 64/361 (17%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 ++ D ++ + G+ + A L L + ++ DQP ++ GV Sbjct: 289 TIDLNDAKVTGRA-SEPLFAARGVHVAAARLEPLRNVLHFDEIRFDQPVVDLARDKHGVL 347 Query: 123 NWF-----------------------------------------QRKSTMDMIHNVILEK 141 N + + ++ + Sbjct: 348 NVEKLAGQPAAAPKAAAGQPAASGAAASTAGATAAASGASSAKAETAAKAAPPLDLTIRH 407 Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201 + GG I + D+ +S + L + L +++G A+ T + R Sbjct: 408 FAIDGGTINVDDRVPATPTAMSLIKL---------AATLDGFTLQGKTPAKYTLSTSLSR 458 Query: 202 SA-FKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF-SVAGDFSK 259 K F K K+ + LA P L L + + G + + Sbjct: 459 GGDVKAEGAFSVAAKQADTKLTVDTLALPA---LQPYLGEATRARVLDGTLGATVNAKAD 515 Query: 260 LLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319 L A+ + + V K +I+ ++ + K V+ + + Sbjct: 516 WGKTPLDAQIA--DSTVSLKSLKVATPDAKAPAIVLPDASAKIAKVDVAARTAEIASVDA 573 Query: 320 NGAESMH------DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENF 373 G ++ E + + + + + D + K++ NF Sbjct: 574 TGLALDVKRLKDGKIDLAALAEPAQAAVPQRTVARKAEAAAPSWHYRIDALNVKDSAANF 633 Query: 374 S 374 + Sbjct: 634 T 634 >gi|186475753|ref|YP_001857223.1| AsmA family protein [Burkholderia phymatum STM815] gi|184192212|gb|ACC70177.1| AsmA family protein [Burkholderia phymatum STM815] Length = 810 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 59/151 (39%), Gaps = 16/151 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIR 70 L DW R + + +G+ A++G +K+ + +P ++I Sbjct: 28 FILTFDWNRARPYVNEKVSEAIGRPFAIEGDLKVGWRHPVGETGWRAWVLWPRFSAQNIT 87 Query: 71 IDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128 I + + ++ + + + LPLL+ +I + + + P ++ G +NW + Sbjct: 88 IANPDWTRQKHFATLDEIDFQVKVLPLLAHDIVIPAINLVNPSVDLERLLDGRNNWTFKL 147 Query: 129 STMDMI--HNVILEKIHVKGGRIKIIDQESD 157 + + L I + G I + DQ+ Sbjct: 148 KSSAQPSEWKLDLHDIQLNKGMIALSDQQKK 178 >gi|237509772|ref|ZP_04522487.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346] gi|235001977|gb|EEP51401.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346] Length = 1321 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 86/287 (29%), Gaps = 27/287 (9%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66 G+G L +V G F R E+Q + + + + +I P+ + Sbjct: 28 GVGALIVLVAFGLLG--FFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEA 82 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 83 DGVRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTD 142 Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + I V GRI+ D+ + + + + I Sbjct: 143 LVDKFSRPLPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSK 202 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237 V + D A A+++ S+ ++ L P ++ Sbjct: 203 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTK 256 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 L + + S V + R+SG ++D V Sbjct: 257 LPVDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297 >gi|167921459|ref|ZP_02508550.1| hypothetical protein BpseBC_23113 [Burkholderia pseudomallei BCC215] Length = 369 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68 G + LV + F R E+Q + + + + +I P+ + Sbjct: 28 GVGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 85 VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144 Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + I V GRI+ D+ + + + + I Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNAKHVVDQWTVGIPFVATLPSKTD 204 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239 V + D A A+++ S+ ++ L P ++ L Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPHLLSYAPTKLP 258 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + S V + R+SG ++D V Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297 >gi|134280804|ref|ZP_01767514.1| conserved hypothetical protein [Burkholderia pseudomallei 305] gi|134247826|gb|EBA47910.1| conserved hypothetical protein [Burkholderia pseudomallei 305] Length = 1321 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 86/287 (29%), Gaps = 27/287 (9%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66 G+G L +V G F R E+Q + + + + +I P+ + Sbjct: 28 GVGALIVLVAFGLLG--FFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEA 82 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 83 DGVRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTD 142 Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + I V GRI+ D+ + + + + I Sbjct: 143 LVDKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNAKHVVDQWTVGIPFIATLPSK 202 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237 V + D A A+++ S+ ++ L P ++ Sbjct: 203 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTK 256 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 L + + S V + R+SG ++D V Sbjct: 257 LPVDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297 >gi|73537463|ref|YP_297830.1| hypothetical protein Reut_B3628 [Ralstonia eutropha JMP134] gi|72120800|gb|AAZ62986.1| Protein of unknown function DUF748 [Ralstonia eutropha JMP134] Length = 1304 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 36/344 (10%), Positives = 93/344 (27%), Gaps = 42/344 (12%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R++ + + L F + E+ AT +G+K+ + G + Sbjct: 16 RKLALRVAGGVVAALAMFGLAGYFGGPPLIKSLIEKNATEALGRKVTL-GEAHVRPF-EL 73 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + D I +++ + + L + V ++ID+ ++ + G Sbjct: 74 AATLTDFTIYERDGKTPAVTLGELEADTSLASVWHLAPVVDSLHIDRLAVHVVREADGRL 133 Query: 123 NWFQRKST---------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 ++ + + I V G + D+ + + +L L + Sbjct: 134 SFADIQDKLAAQPPKPPDAKPARFSVNNIAVTGSSVAYEDKVAGSNVRVDNLTLTLPFLS 193 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP---- 229 + + + + A T A ++ L + L Sbjct: 194 NLPHDVEIVT------RPTLSAHVNGTPLALDGTVLPFADSRETHLNVNFDGLDVARFMP 247 Query: 230 ------------IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GNF 276 ++D L + +++ S + L++ A +S G Sbjct: 248 FAPKLKDADVKHGLLDTRLTLGFRQQKDKQDIFVS-GTAALRELDVRTLAGAPLISNGKL 306 Query: 277 KISDGNV-------RISRYKLQSILPNSSTDEDNKTKVSQDEEN 313 V + + + + D ++ Sbjct: 307 AFDIDRVEPLARQAHLRSVDIDGLNVAAVRRADGSLNLATAFVP 350 >gi|167564866|ref|ZP_02357782.1| hypothetical protein BoklE_20090 [Burkholderia oklahomensis EO147] Length = 393 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 90/294 (30%), Gaps = 29/294 (9%) Query: 3 RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R IG+ +V L+G F P I R E+Q + + + + +I P+ Sbjct: 25 KRTGIGVLIFLAVFGLLGFFAAPPLI-----RHVAEQQLSQQLDRPATIS---RIAFNPY 76 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + + ++ I L +RA + L V ++ +DQP + Sbjct: 77 TLRLEADGVHVGERGGQGDFVDIGKLVVRASWTSLARFAPIVDEVRLDQPRFHIVRYDAQ 136 Query: 121 VSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 N+ + I V GRI+ D+ + + + ++ I Sbjct: 137 RFNFTDLVDKFSKPSPQPSTKPARFSVSNIQVNDGRIEFDDRLLNAKHVVDQWSIGIPFI 196 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 V + D A A+++ S+ ++ L P ++ Sbjct: 197 ATLPSKSDIF------VTPKLRARLDGSPIALDGKTKPFAQSRESSIDLKFDGLDVPRLL 250 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 + + + + R+SG ++D V Sbjct: 251 SYAPT-KLPVEVRSGKLSSDL----NVNFAMSGDTPALRVSGTVDLNDAQVTSP 299 >gi|311695905|gb|ADP98778.1| AsmA family protein [marine bacterium HP15] Length = 721 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 104/355 (29%), Gaps = 44/355 (12%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLS 87 + D++ E+ + ++G I +P + + + G +E L Sbjct: 30 NPNDYKPQIEQAVEDATNLDLVLEGDIGWSFIP-LGLELNSVEATLE--GDRFVALEQLV 86 Query: 88 MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------------------- 124 + +F L++ RV +D + +G NW Sbjct: 87 AQIDFWSLIAMSPRVNTFVLDGLDARLEVDEQGNGNWTRIMPEKAAGAATEETAGTQDEQ 146 Query: 125 -FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + N +E + + ++ D+ + Q L + + S L PL I Sbjct: 147 AQESEGGGGEPLNFNVENVQISNAQVHYTDKSTGQSVTLENFTVNASNITLGSEFPLEIG 206 Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKIQLFPLAYPI-----IIDLFGN 237 + + + + ++ AN A+S L P +L G+ Sbjct: 207 FRVATTQPTFEVDGN---ISARLAANEALNEFAVSGLNAVFDMTGEPFGGKEVTAELAGS 263 Query: 238 LFWNEKQPIYSGV-FSVAGDFSK---LLNLELSAKKSRLSGNFKISDGNVR--ISRYKLQ 291 N + + F+ + L++ K LSG I++ +++ ++ Sbjct: 264 ARANLENETANLSGFTASLANLNLSTDLDVTGFGDKPTLSGEISIAEFSLKDLLNNLGQP 323 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346 + + + + D +T F + + Sbjct: 324 PVETSDPDVLEAIAFSTGIGGPAGKVELTDLTIKLD--DTTFTGSGSYNLADTGV 376 >gi|298207556|ref|YP_003715735.1| outer membrane assembly protein [Croceibacter atlanticus HTCC2559] gi|83850192|gb|EAP88060.1| outer membrane assembly protein [Croceibacter atlanticus HTCC2559] Length = 884 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 54/383 (14%), Positives = 117/383 (30%), Gaps = 40/383 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKG---GIKIHI 58 ++++L G ++++G P F+ E+ + + + + + + Sbjct: 1 MKKILKIFGIFVLILVIGLIAAPFL-----FKGTIEKLIKKTINNNVNAQVEWRDLDLTL 55 Query: 59 ---LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE---IRVFDMYIDQP 110 P +V KD + + G + E L ++ LL E I+V ++ +++ Sbjct: 56 FSSFPDATVVIKDFSVVNNDPFKGDTLASGERLELQMGIKQLLKKENEQIKVDELNLEKA 115 Query: 111 HLNFYLSSKGVSNWFQRKSTM----------DMIHNVILEKIHVKGGRIKIIDQESDQVY 160 ++N + S G +N+ K L +K RI +D+ + + Sbjct: 116 YINIKVDSLGNANYDIAKEQPQTIETPTDTTSSGFTFDLSHYEIKDSRINYLDESTKTFF 175 Query: 161 FLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 L D+N + S L + S+ +G ++ + + Sbjct: 176 KLKDVNHVGNGDLSVSKSTLETQTNALVSLDLDGVNYLEDHTITLDANFELDLDKQKYTF 235 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS------AKKSRLS 273 ++ + + G + NE F K + + Sbjct: 236 -LENEAKINELPLTFNGFVQVNEDNNDIDITFKTPSSDFKNFLAIIPKTYSKNLDGVDTT 294 Query: 274 GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL-NETD 332 G+F + G ++ + N E N D+ NET Sbjct: 295 GDFIVD-GKIKGIVDDTHIPTLDIKIRSSN-ASFKYAELPK---RVNNITINADIKNETG 349 Query: 333 FFEEEEKKNKNDDLKKDDIQYSV 355 E+ N K D ++ Sbjct: 350 IVEDTYINIGNLTFKIDQDVFAA 372 >gi|242279977|ref|YP_002992106.1| AsmA family protein [Desulfovibrio salexigens DSM 2638] gi|242122871|gb|ACS80567.1| AsmA family protein [Desulfovibrio salexigens DSM 2638] Length = 1081 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 95/290 (32%), Gaps = 20/290 (6%) Query: 3 RRVLIGLGFLFSV-VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++ L LF + +L +++ + R E + + +++ + + P+ Sbjct: 9 KKLFWILFILFDLCILAAVVGGVFYLESDEPRIALENILSEKLEREVRFDENLDLIFYPW 68 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V + + D + ++G+ + +PLLSG++ V + +D P L+ Sbjct: 69 LGVETGPLTVSAPVDSAYPHQLTVQGIDFKVRLIPLLSGDLEVDTIIVDSPSLHVDRLKD 128 Query: 120 GVSNWFQRKSTMDM---------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 G N S ++ + + V D+ S + +S +N++ Sbjct: 129 GSLNLPLLGSDDGAENDDVGIKYFDSISVRGLSVLNATCSYSDKGSGNSFTVSGVNVRTG 188 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + ++ + + + K SL +++ Sbjct: 189 LLRKGTPLAFDLSAMLDAALFNLKAQANLKGLLDFSVQEKQVSLSETSLSVKVESD---- 244 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280 +L G E K L L+ + RLSG+ +D Sbjct: 245 --ELLGKGEVVEGIASLDFNLVEGMIDVKGLVLQGAG--VRLSGSANCTD 290 >gi|313201061|ref|YP_004039719.1| hypothetical protein MPQ_1320 [Methylovorus sp. MP688] gi|312440377|gb|ADQ84483.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 1305 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 57/380 (15%), Positives = 117/380 (30%), Gaps = 31/380 (8%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPS 63 L F +V+ + +P + +R D E +AT +G+K+++ G IK P Sbjct: 18 WLAIFAFAAAVLSMRYLVLP---NIDKYRADIEARATAAMGQKVSI-GEIKASWDGLNPH 73 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV-- 121 + ++ I E + + +L + E R+ + I QP L ++G Sbjct: 74 LSLYNVDIHDAE-ERPALSLGHVEASLSWLSIPLLEPRLSSIEIYQPELTIRRDAQGTLY 132 Query: 122 ---SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNII 177 + +I V + D+ L+ LNL++ + + Sbjct: 133 VAGMAMGGPSRPQFANWALRQSRIDVLDASVIWEDELRKAPPLSLTQLNLRVVSPAWKGL 192 Query: 178 S--------PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 L + G + + AK + + ++YP Sbjct: 193 IGHHMFGLRALPSAGSSAPIDIRGNLYGKDISQPEDWSGTVYAKLEGTDISAWRKWISYP 252 Query: 230 III-DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNV 283 + + +G + + V+ + LSA + LSG Sbjct: 253 FDLYEGYGAARFWLQLDDGKPSNIVSDVILSDVKTRLSASSPQATLNHLSGRLSWDKHK- 311 Query: 284 RISRYKLQSILPNSSTDEDNK-TKVSQDEENLLNFSENGAESMHD---LNETDFFEEEEK 339 + ++I N+ D + +S E + + D L+ + F Sbjct: 312 DGQEFTAENIKLNTPDGLDMQNGSISLRERWIKDKQWIEGRVRLDEILLDTLNTFAGYIP 371 Query: 340 KNKNDDLKKDDIQYSVNKKE 359 KN +I + + Sbjct: 372 LPKNLKQNLQEISPTGKLEN 391 >gi|167572069|ref|ZP_02364943.1| hypothetical protein BoklC_19674 [Burkholderia oklahomensis C6786] Length = 377 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 90/294 (30%), Gaps = 29/294 (9%) Query: 3 RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R IG+ +V L+G F P I R E+Q + + + + +I P+ Sbjct: 25 KRTGIGVLIFLAVFGLLGFFAAPPLI-----RHVAEQQLSQQLDRPATIS---RIAFNPY 76 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + + ++ I L +RA + L V ++ +DQP + Sbjct: 77 TLRLEADGVHVGERGGQGDFVDIGKLVVRASWTSLARFAPIVDEVRLDQPRFHIVRYDAQ 136 Query: 121 VSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 N+ + I V GRI+ D+ + + + ++ I Sbjct: 137 RFNFTDLVDKFSKPSPQPSTKPARFSVSNIQVNDGRIEFDDRLLNAKHVVDQWSIGIPFI 196 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 V + D A A+++ S+ ++ L P ++ Sbjct: 197 ATLPSKSDIF------VTPKLRARLDGSPIALDGKTKPFAQSRESSIDLKFDGLDVPRLL 250 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 + + + + R+SG ++D V Sbjct: 251 SYAPT-KLPVEVRSGKLSSDL----NVNFAMSGDTPALRVSGTVDLNDAQVTSP 299 >gi|226194713|ref|ZP_03790307.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan 9] gi|225933279|gb|EEH29272.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan 9] Length = 1323 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68 G + LV + F R E+Q + + + + +I P+ + Sbjct: 28 GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 85 VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144 Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + I V GRI+ D+ + + + + I Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239 V + D A A+++ S+ ++ L P ++ L Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + S V + R+SG ++D V Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297 >gi|217423051|ref|ZP_03454553.1| conserved hypothetical protein [Burkholderia pseudomallei 576] gi|217393959|gb|EEC33979.1| conserved hypothetical protein [Burkholderia pseudomallei 576] Length = 1323 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68 G + LV + F R E+Q + + + + +I P+ + Sbjct: 28 GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 85 VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144 Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + I V GRI+ D+ + + + + I Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239 V + D A A+++ S+ ++ L P ++ L Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + S V + R+SG ++D V Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297 >gi|126663144|ref|ZP_01734142.1| putative outer membrane protein [Flavobacteria bacterium BAL38] gi|126624802|gb|EAZ95492.1| putative outer membrane protein [Flavobacteria bacterium BAL38] Length = 869 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 106/390 (27%), Gaps = 43/390 (11%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58 ML++VL G G V L+ P +E + V IA + + + + Sbjct: 1 MLKKVLKGTGIFLLVTLIALAAAPFLF-KDKIKEMIAKTLNESVNANIAFE-DVDLSLFK 58 Query: 59 -LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE---IRVFDMYIDQPHL 112 P +V + + I K ++ L G+ + + + + Sbjct: 59 SFPKANVTIEKLSIITKAPFENDTLLYAGETNVTMSIKELFKGDDEAMNLESFSVVDGIV 118 Query: 113 NFYLSSKGVSNW-------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 N + G+ N+ +KS+ + ++ V+ + +D+ S+ L + Sbjct: 119 NIIFNKDGIGNFDIAIKEEADKKSSESKPFALSIQNYEVENLKFSYVDESSNMKMVLDSI 178 Query: 166 NLQISARFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 F L + S E T N + + K Sbjct: 179 YHDGKGNFAAQKLDLETKTTAKLSFEMEKTNYMKNVGISLDAVLGIDLEKSKYEFK-DNK 237 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL------LNLELSAKKSRLSGNFKI 278 L + ++ G + E Y F K K + +G F + Sbjct: 238 ALINQLPLEFNGFIQMVEAGQTYDLTFKTPTSDFKNFLGLIPEAYSGDINKVKTTGQFTV 297 Query: 279 SDG------NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM-HDLNET 331 I + ++ N+S L S H +NET Sbjct: 298 DGKVKGNLTETTIPAFDIKIASKNASFQ-----------YPNLPKSVKNIVIDTHIINET 346 Query: 332 DFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361 + D ++ + Sbjct: 347 GVMNDTYVNLNQLSFSIDQDVFNAKATVKN 376 >gi|319943368|ref|ZP_08017650.1| AsmA family protein [Lautropia mirabilis ATCC 51599] gi|319743183|gb|EFV95588.1| AsmA family protein [Lautropia mirabilis ATCC 51599] Length = 779 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 108/360 (30%), Gaps = 39/360 (10%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFESKIE 84 F+D F+ + ++ +G +K+ I P V ++R+ + + + Sbjct: 25 FVDVNYFKPQIANFVATRYNRTLSFEGDLKLSIFPHVGVTLPEVRLSEPNQPEQEAASLT 84 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW--------------FQRKST 130 + LPLL G+++ + ID + G + Sbjct: 85 SAQVSVALLPLLKGDVQADTVTIDGLKAKVVRQADGSMSIDDLLGAQDAPAQEQPAEPEA 144 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 I + + + R+ D+++ Q Y L LN++ I +P+S+ G+ Sbjct: 145 AAKIPAFHVNGVTLANARVVFDDRQAGQTYTLERLNVETGPLANVIETPVSLSLGFGATS 204 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250 E G+F + LKI L Y + G + + Sbjct: 205 PEARGDF----------------SMKGQLKIDLEQGRYGLRDFSAGLKGAIDTLQVQQFA 248 Query: 251 FSVAGDFSKLLNLELSAKKSRLS--GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308 + G + L G ++ KL +I + ++ + + KVS Sbjct: 249 LKLKGFSFDPQGPIIDLNDLALDAQGRMGADSFRGTVAAPKL-AIASDKASGDTVQAKVS 307 Query: 309 QDEENLLNFSEN-----GAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDN 363 ++ L+ G +N + + + K + Sbjct: 308 LGDKEWLSAVLTLAGVGGTADDLKVNSLGLDAKLTQDGRTVAAKLATPVQASLAAGRYQL 367 >gi|221200695|ref|ZP_03573736.1| conserved hypothetical protein [Burkholderia multivorans CGD2M] gi|221179267|gb|EEE11673.1| conserved hypothetical protein [Burkholderia multivorans CGD2M] Length = 1264 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 97/334 (29%), Gaps = 42/334 (12%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65 IGLG L +VL G F R E+Q + + + ++ +I + P+ ++ Sbjct: 28 IGLGILIFLVLFGLLG--FFAAPPLIRHIAEQQLSKQLDRPATIR---RIALNPYTLNLE 82 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 I + + I L +R + L G V ++ +D P N+ Sbjct: 83 ADSIHVGEHGGQGDFIDIAKLVVRPSWTSLFRGAPIVNEIRLDSPRFRIVRYDAQRFNFT 142 Query: 126 Q-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + I + GRI D+ ++ + + + L + Sbjct: 143 DLIEKFSTPSKPDSKPTLFSVSNIQINNGRIDFDDRLLNEKHVVDEWTLGVP------YI 196 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID----- 233 V + FD A A+++ + ++ L P +I Sbjct: 197 ATLPSKTDIFVEPKLRMRFDGSPIAIDGKTKPFAQSRESEIALKFDRLDVPKLISYVPAK 256 Query: 234 LFGNLFWNEKQPIYSGVFSVAG----------DFSKLLNLELSAKKSRLSGN-------- 275 L + S F ++G + A + + Sbjct: 257 LPVAVTSGLLSSDLSVNFVMSGDTPALRVSGTVDLTDAKVTGPASEPLFAARGVHVAAAG 316 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + + +L + + S D+ V + Sbjct: 317 LEPLRNAMHFDEIRLDRPVIDLSRDKQGVLNVEK 350 Score = 49.9 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 97/357 (27%), Gaps = 61/357 (17%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 +V D ++ G+ + A L L + ++ +D+P ++ +GV Sbjct: 288 TVDLTDAKVTGPA-SEPLFAARGVHVAAAGLEPLRNAMHFDEIRLDRPVIDLSRDKQGVL 346 Query: 123 NWF------------------------------------QRKSTMDMIHNVILEKIHVKG 146 N Q T ++ + + + G Sbjct: 347 NVEKLAGSPAAAPKAASAAANGASRAAVAAASAPAASGAQAADTKTPPLDLTIRHVAIDG 406 Query: 147 GRIKIID--QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204 G + + D + L+ L + L +P ++ S+ G Sbjct: 407 GTVNLDDRVPATPTALALTKLAATLDGFALQRKTPAKY-TLSTSLSRGGD---------L 456 Query: 205 KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA-GDFSKLLNL 263 K K + K+ + LA L L + + G + Sbjct: 457 KAEGTVDVAAKQVDTKLVVDALALAP---LQPYLGEATRARVLDGALGATINAKADWGKT 513 Query: 264 ELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 L A+ + + + K +I+ + + K V+ + + +G Sbjct: 514 PLDAQVA--DSELSLKSLKLATPDAKAPAIVLPDARAKIAKVDVAARTAEIASVDAHGLA 571 Query: 324 SMHD------LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374 ++ F + + + + + D + KE NF+ Sbjct: 572 LDVKRLKNGNIDLAAFASPAQPAVPQRTVARKAQAAAPSWHYRIDALNVKEASANFT 628 >gi|189500157|ref|YP_001959627.1| hypothetical protein Cphamn1_1214 [Chlorobium phaeobacteroides BS1] gi|189495598|gb|ACE04146.1| hypothetical protein Cphamn1_1214 [Chlorobium phaeobacteroides BS1] Length = 928 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 63/402 (15%), Positives = 125/402 (31%), Gaps = 37/402 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI 58 + + L + +V+ F V + + + G I I Sbjct: 1 MSKFLKYFLLILVLVMTSGFIVL-----QVLKPRLNGFIKQALNSAVDANVDYGDADISI 55 Query: 59 L---PFPSVFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113 P S+ KD+++ + E S+ + + SGE+++ + +D+P ++ Sbjct: 56 FQAFPAVSLSCKDLQVLDKNVSGMDILATAEKFSVAFDPFSVFSGELKIASLRVDRPMIH 115 Query: 114 FYLSSKGVSNWFQRKSTMDMIH-------NVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 + S G +NW N++ +K G I D + + + + N Sbjct: 116 IRIDSAGRNNWDVFPPADPSKSSQELSGLNLLFRDFKIKDGYIVFYDSKKNNSFLVQGFN 175 Query: 167 LQISARFLNIISPLSIDSIKGSV--IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 ++ R S L S+ S+ G D R++F +N+ LK Sbjct: 176 YEMKGRLGGRSSTLRTSSVMDSLSVTIGGMSLLDKTRASFTAEIAADLENRKFQLK-DNR 234 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA------------KKSRL 272 + I L G + + F K L L R Sbjct: 235 LALNEMGIVLDGTVSLLDDAVNTDLDFRADNIELKELLSLLPVLYENNYKKLDARGGVRF 294 Query: 273 SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETD 332 +G+ K ++ ++L + + S + + EE + S D Sbjct: 295 AGHVKGLYRKEQLPAFELALDVSDGSFGYEGVP--VRAEEISFSSSVTNPGGDADKTLLS 352 Query: 333 FFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374 E + N + K D++ V+ + N +F Sbjct: 353 VPELTLRINGKPVVMKLDVKTPVSDPYIDAAINGSLNLSDFQ 394 >gi|254263750|ref|ZP_04954615.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a] gi|254214752|gb|EET04137.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a] Length = 1317 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68 G + LV + F R E+Q + + + + +I P+ + Sbjct: 28 GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 85 VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144 Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + I V GRI+ D+ + + + + I Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239 V + D A A+++ S+ ++ L P ++ L Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + S V + R+SG ++D V Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297 >gi|53721262|ref|YP_110247.1| hypothetical protein BPSS0227 [Burkholderia pseudomallei K96243] gi|52211676|emb|CAH37672.1| putative membrane protein [Burkholderia pseudomallei K96243] Length = 1319 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68 G + LV + F R E+Q + + + + +I P+ + Sbjct: 28 GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 85 VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144 Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + I V GRI+ D+ + + + + I Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239 V + D A A+++ S+ ++ L P ++ L Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + S V + R+SG ++D V Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297 >gi|126458398|ref|YP_001074364.1| hypothetical protein BURPS1106A_A0321 [Burkholderia pseudomallei 1106a] gi|242311828|ref|ZP_04810845.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b] gi|126232166|gb|ABN95579.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a] gi|242135067|gb|EES21470.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b] Length = 1318 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68 G + LV + F R E+Q + + + + +I P+ + Sbjct: 28 GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 85 VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144 Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + I V GRI+ D+ + + + + I Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239 V + D A A+++ S+ ++ L P ++ L Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + S V + R+SG ++D V Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297 >gi|187927862|ref|YP_001898349.1| hypothetical protein Rpic_0766 [Ralstonia pickettii 12J] gi|187724752|gb|ACD25917.1| protein of unknown function DUF748 [Ralstonia pickettii 12J] Length = 1260 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 106/338 (31%), Gaps = 39/338 (11%) Query: 3 RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R+ IG+ + L+GAF P + Q + ++ + ++V KI I P+ Sbjct: 44 KRIGIGVLIFLVMFGLLGAFGGPPL-----LHHLAQTQLSQLLERPVSVG---KISINPY 95 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I +++ + + L + A + + + ++ ID PH+ +++ Sbjct: 96 TLRLDVDQLHIAERDGKTPFVDVGHLHVNASWSSIFRRAPVIEELSIDAPHVRIVRTAEQ 155 Query: 121 VSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 N+ K + + + + G I +DQ + + L + + Sbjct: 156 RFNFSDIVDKLSQPETAPKPKSNEPARFVFANLQLTNGAIDFVDQPLGGQHKVEGLQIGV 215 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 P +D ++ D F A + +L +++ L P Sbjct: 216 PFV---ASLPADVDIFVQPLLV---ARIDGAPLHFAGKTKPFADSLESNLNVKIDGLDLP 269 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 + G + + G + + R+ G + + V Sbjct: 270 RYL---GYVPGPLPVAVPQGKLTTD-LTIDFQKPKSGTPVLRVHGTTGLDNLEV------ 319 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + + + + L+ + D Sbjct: 320 --VDARKAPLVAAKQVRATLADVRPLDNVFHLDALTLD 355 >gi|197116923|ref|YP_002137350.1| hypothetical protein Gbem_0525 [Geobacter bemidjiensis Bem] gi|197086283|gb|ACH37554.1| DUF748 repeat protein [Geobacter bemidjiensis Bem] Length = 1210 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 99/306 (32%), Gaps = 31/306 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61 + +LI + S+++ +P+ + R G+++ + + I PF Sbjct: 6 KYILISAAIVTSIIVFVTALLPIIV-----RNKTVSTLKEATGREVHLS---SVSINPFT 57 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 +V D I +K + + + ++ +D P ++ ++ Sbjct: 58 LTVTVNDFAIAEKTG-PPLVAFRKAKASLALASVYKRALILSEIVLDTPSVSLVRTAPNR 116 Query: 122 SNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLNLQIS- 170 N+ + L I VK G I+ D+ + + + DL + I Sbjct: 117 FNFSDIIDRQPKGKAPEQGKPFLFSLNNISVKNGSIEFDDRMTAGGRKHTVRDLQITIPF 176 Query: 171 ----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 + + ++ TG + + + + K + + P+ Sbjct: 177 ISNIPYLADRYVDPRLAAVVNGAPFNFTGKLKPLSKSLETSVHIGLKGLNLPQYLAYAPV 236 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 P+ + G L + + V+ D L L+ A + + N +R+ Sbjct: 237 PPPVDLT-SGRLTLD-----MDLAYRVSADKKPELILKGGAGLAEVRVNLLDGKPLLRLP 290 Query: 287 RYKLQS 292 +L++ Sbjct: 291 SLELKA 296 >gi|330961858|gb|EGH62118.1| AsmA family protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 691 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 33/274 (12%), Positives = 82/274 (29%), Gaps = 39/274 (14%) Query: 47 KIAVKGGIKIHILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDM 105 ++ + G I + P+ + D + + ++ L + LPLL ++++ D+ Sbjct: 1 ELTLNGDIGWSLFPWLGLELHDTHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDI 60 Query: 106 YIDQPHLNFYLSSKGVSNWFQ-----------------------RKSTMDMIHNVILEKI 142 ++ +L + G NW + + ++ + Sbjct: 61 RVEGLNLTLHRDENGHGNWEDIGKPAVSSTGTPETTPPPSPEAPKPDRPSQPLRLDIDSL 120 Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGT 194 V R+ D + + + L P+ + + ++ G Sbjct: 121 TVNNARVDYSDARKGRTFMAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGQ 180 Query: 195 GNFDNKRSAFKI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 D ++ + + + K F +++DL N+ + Sbjct: 181 LRMDRVLKRYQFEDMRLSGEIAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKFSANQL 240 Query: 252 SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 G L K ++SG I+ ++R Sbjct: 241 RALG----ELRARDLDKTPQISGGLSIAQLDLRT 270 >gi|187251749|ref|YP_001876231.1| hypothetical protein Emin_1344 [Elusimicrobium minutum Pei191] gi|186971909|gb|ACC98894.1| Uncharacterized protein involved in outer membrane biogenesis [Elusimicrobium minutum Pei191] Length = 776 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 57/404 (14%), Positives = 133/404 (32%), Gaps = 46/404 (11%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + + F+ + +G + + D + Q + + + + G +++ Sbjct: 38 IKTLTFFMLFMVFLAALGWAMFIKYFNAQDVSQLIADQMQSALARPVVI-GSLELQFFNS 96 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + I + + + E +S+R +L EI + ++ + P + + G Sbjct: 97 AKIKKMLILDTEIPNAPPLLEAEEVSLRYNIWDILKKEIHIEEVTLKNPKIIISKNEDGS 156 Query: 122 SNWF-------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 N + + V ++ + G + D + V+ L D++++ Sbjct: 157 LNMPVIDISSARQIVSKTPGTNKEESFKVRIDDWKIVNGTFMLRDDFKNTVHALYDVDME 216 Query: 169 ISARFLNIISPLSIDSI----------KGSVIAEGTGNFDN---KRSAFK-ITANFPAKN 214 N S + + +V A G+ NF N R + + Sbjct: 217 FRNLNFNAPSNFKTGFLMRNVWQDKMIEVAVKAGGSVNFSNFDWSRFNLRNTNVELAFFD 276 Query: 215 KAISLKIQLFPL---------AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF-SKLLNLE 264 K I +++ + + P + D +LF N+ I ++ + K Sbjct: 277 KPIKIRLDVDNVYTPFLSFTADIPPLTDADLSLFLNKPLNINFPQMKISANTVLKRSYHH 336 Query: 265 LSAKKSRL-SGNFKIS-DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA 322 S K +L SG+ K GN+ + R + + + K + N NGA Sbjct: 337 FSVNKLQLTSGDIKADASGNLYLDRLEGDFNVKTDFFKMEGKETI-YAGIKKFNLKGNGA 395 Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHD 366 +N F++++ ++ + + N D Sbjct: 396 -----VNLKGVFKDKKVTFPEVEVSVKNAAAKIGNYNGGWNISD 434 >gi|4185552|gb|AAD09124.1| AsmA [Rhodobacter sphaeroides] Length = 150 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 47/131 (35%), Gaps = 3/131 (2%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R ++ LF + + + E R+ G+ + + G ++ I P Sbjct: 1 MRWLVRLAAVLFGLA-ALFLVALVLMPRERVAELAAREFEAATGRDLTISGDVRPSIWPR 59 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V + + + L + + L L+SG R+ + +++P + ++ Sbjct: 60 LGVRTGPVTVANAPWTDEGPMLEARSLEIGLDTLALMSGAWRISRIALEEPVIRLERDAE 119 Query: 120 GVSNWFQRKST 130 G +NW Sbjct: 120 GRANWDLSSPP 130 >gi|187477068|ref|YP_785092.1| hypothetical protein BAV0559 [Bordetella avium 197N] gi|115421654|emb|CAJ48164.1| putative exported protein [Bordetella avium 197N] Length = 826 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 46/411 (11%), Positives = 112/411 (27%), Gaps = 54/411 (13%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81 L D ++ E + + ++G I++ + P + + + + + + Sbjct: 25 IFLLTFDPNAYKYKLEELVQERYHRTLTIEGEIELSLFPRIGLAVQGVSLSEANSPEVFA 84 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------------- 124 I+ + + PLLS + V + I+ G N+ Sbjct: 85 SIDSMRLAVAVWPLLSNNLVVDHVTINGFKARIAREKSGQFNFENLVGGVEPSTAVPANA 144 Query: 125 ---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 + + + + +K G +++ D S ++ LN Sbjct: 145 AEATVGAIAGAAQALSSGTVSAPRSMQIDIAGLDLKDGELQLQDALSGMAVSVTHLNANT 204 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-PLAY 228 N +S ++ + + + + L+++ P A Sbjct: 205 GRVTFNQPFDVSFNARVEGGDPRFDAGLTGQALLRLDPSAKRYSAQRLDLRMEGKLPSAQ 264 Query: 229 PIIIDLFGNLFWNEKQPIYS-------GVFSVAGDFSKLLNLELSAKKSRLS-----GNF 276 + + GNL +N V ++L +E S +LS Sbjct: 265 AKSLAVRGNLAFNGASSSLDVAGLEVVFQGDVTHPAARLTGVEASVAMPKLSVDPHKAQL 324 Query: 277 KISDGNVRIS--------RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328 +I R + L + + S + + + + Sbjct: 325 QIDKLAARAKGNSPEGPFEFALDTPSLHISPTSAG-GDALTGRIRNPSLDASFSLTGISG 383 Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 N + +E K + + ++ + + + GD I Sbjct: 384 NAAELDIKEAKIDAAVKQGERVVKTVFASPVSLNLTQRAGSLAALKGDVNI 434 >gi|146343725|ref|YP_001208773.1| putative AsmA-like protein [Bradyrhizobium sp. ORS278] gi|146196531|emb|CAL80558.1| putative AsmA-like protein [Bradyrhizobium sp. ORS278] Length = 699 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 97/281 (34%), Gaps = 12/281 (4%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + I G L +V++V A + + + + + G ++++ GG + + P Sbjct: 1 MKALKIAGGLLGAVIVVLALALAFGLPASFLTVAIQDRVERDTGYRLSIAGGATVSLWPS 60 Query: 62 PSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V DI + + DG+ + L L SG + ++ I++P L L + Sbjct: 61 LQVTLTDITLQDPKDRDGNNRLTVSRLQADMALSSLWSGRPDISEISIEKPTLYLPLLRE 120 Query: 120 GVSNWFQRKS---TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 + + R + + V + + V G + + + L L+ S I Sbjct: 121 RLRDNAPRSRSSAKPESVPAVRIASVTVTDGAVILSNPRDRVENRLEGLSATGSLSGDKI 180 Query: 177 ISPLSIDSIKGSVIAEGTGN-----FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 S + V E D + + + + L + + Sbjct: 181 KIKGSARAGDRPVTFEINAAAPAMPIDRQTLPVDFRIGMESAFRGV-LAGRADVRLNGAL 239 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 I + G L ++G SV L+ ++L ++ L Sbjct: 240 IMING-LSGTLGDGDFNGWASVDLASKPLVKIDLDVRRLDL 279 >gi|83716151|ref|YP_440353.1| hypothetical protein BTH_II2165 [Burkholderia thailandensis E264] gi|83649976|gb|ABC34040.1| Domain of Unknown Function (DUF748) family [Burkholderia thailandensis E264] Length = 1382 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 85/286 (29%), Gaps = 25/286 (8%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66 G+G L +V+ G F R E+Q + + + + +I P+ + Sbjct: 100 GIGVLIFLVVFGLLG--FFAAPPLIRHVAEQQLSRQLERPATIA---RIAFNPYTLRLEA 154 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125 + + ++ I L +RA + L V ++ +DQP N+ Sbjct: 155 DGVHVGERGGQGDFVDIGKLVVRASWTSLARFAPIVDEVRLDQPRFRIVRYDAQRLNFTD 214 Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + I V GRI D+ + + + L I Sbjct: 215 LVDKFSKPSPQPSAKPVRFSVSNIQVNDGRIDFDDRLLNAKHVVDQWTLGIPFIATLPSK 274 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 V + D A A+++ S+ ++L L P ++ Sbjct: 275 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKLGGLDVPRLLS---YA 325 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + SG S + R+SG ++D V Sbjct: 326 PTRLPVDVRSGKLS-SNLDVNFAMA-GDTPSLRVSGTVDLNDAQVT 369 >gi|254461642|ref|ZP_05075058.1| AsmA [Rhodobacterales bacterium HTCC2083] gi|206678231|gb|EDZ42718.1| AsmA [Rhodobacteraceae bacterium HTCC2083] Length = 926 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 39/339 (11%), Positives = 92/339 (27%), Gaps = 23/339 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 R LI L + V + A L + Q + G+ + + I++ P Sbjct: 2 RFLIRLIVIVLVAVAIAIVGLLMLPGEKIARIAADQLSKQTGRAVDISSETSINLYPTLG 61 Query: 64 VFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 V I + + L++ + L+ G IR+ + P + ++ G+ Sbjct: 62 VTTGPASIASADWAKNGPLMTADSLAIGIDVPALIGGTIRITKLEAKSPRIVLERAADGL 121 Query: 122 SNWFQRKST-------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 +NW S D +++ LE+ + ++ ID + L ++++ Sbjct: 122 TNWDLLPSREPVETTEPVNETTEDQSYDLSLERALITDAGLRYIDHGTGTDQDLKNVDID 181 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 + L + L + + + I + A++ Sbjct: 182 LRWPSLGGPAELILGITPFTERLNLNTTVGDVMGL--IGGSQTTVIGALNAAGADLSFEG 239 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFS-KLLNLELSAKKSRLSGNFKISDGNVRISR 287 I + P + G + ++ + + Sbjct: 240 IASIKPEAAMQLTGSIPNVGALMRALGQDPATFGLAPNFNPSADINSQVNFDGTRLALRE 299 Query: 288 YKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESM 325 L +++ V + N Sbjct: 300 MAL----ALNTSTVSGDADVVLALGSPQVTAKLNADIKN 334 >gi|126665719|ref|ZP_01736700.1| hypothetical protein MELB17_04102 [Marinobacter sp. ELB17] gi|126629653|gb|EBA00270.1| hypothetical protein MELB17_04102 [Marinobacter sp. ELB17] Length = 724 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 94/289 (32%), Gaps = 36/289 (12%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGL 86 ID ++ E+ + + G I +P + ++ K DG +E L Sbjct: 29 IDPNTYKPQIEQAVEKQTNLDLILDGDISWSFIP-IGLELNNVE--AKLDGERFIALERL 85 Query: 87 SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------------------- 125 +F LL+ +V + +D + ++ KG +NW Sbjct: 86 VAEIDFWSLLAMSPQVNNFVLDGLDAHLSVNKKGEANWTRIMPEKDAQQAASSEPAPDAT 145 Query: 126 ---QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + N + + + R+ D + Q L D L S L PL I Sbjct: 146 ASETASESSSEPLNFNVSNVEIANARVHYTDATTGQEITLEDFTLGASNITLGSEFPLDI 205 Query: 183 DSIKGSVIAEGT------GNFDNKRSAFKITANFPAKNKAISLKI-QLFPLAYPIIIDLF 235 + + + ++ +A+ + I + I L Sbjct: 206 SFRVDTAEPKMSVTGSIAARLSANQALDAFSASGLDASFDIGGDAFAGKTVTAKISGSLA 265 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKL-LNLELSAKKSRLSGNFKISDGNV 283 NL N+ + FS A + LN+E K +L+GN I++ ++ Sbjct: 266 ANLA-NKTAKLKDIGFSFANLSANTNLNVEGFGDKPKLAGNIAINEFSL 313 >gi|289672234|ref|ZP_06493124.1| AsmA family protein [Pseudomonas syringae pv. syringae FF5] Length = 688 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 40/381 (10%), Positives = 100/381 (26%), Gaps = 73/381 (19%) Query: 51 KGGIKIHILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 G I + P+ + D + + ++ L + LPLL ++++ D+ ++ Sbjct: 1 NGDIGWSLFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEG 60 Query: 110 PHLNFYLSSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVK 145 +L + G NW + + ++ + V Sbjct: 61 LNLTLHRDENGHGNWEDIGKPVVASTEAPGETTPAPAPDAPKADRPSQPIRLDIDSLTVN 120 Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNF 197 R+ D + + + L P+ + + ++ G Sbjct: 121 NARVDYSDARKGRTFMAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGALRM 180 Query: 198 DNKRSAFKI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ---------- 244 D ++ + + + K F +++DL N+ Sbjct: 181 DRVLKRYQFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRAL 240 Query: 245 -----------PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNV 283 P SG S+A + + +S + ++ Sbjct: 241 GELRARDLDKTPQISGGLSIAQLDLRAFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSL 300 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKN 341 + L+ + + V + L G D EE + K Sbjct: 301 ALENLNLKV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAA 356 Query: 342 KNDDLKKDDIQYSVNKKEEKD 362 + +++ + + + Sbjct: 357 RKSEVQSGEAAAAAGDSPLPE 377 >gi|89076130|ref|ZP_01162488.1| hypothetical protein SKA34_09148 [Photobacterium sp. SKA34] gi|89048140|gb|EAR53724.1| hypothetical protein SKA34_09148 [Photobacterium sp. SKA34] Length = 1322 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 46/387 (11%), Positives = 118/387 (30%), Gaps = 19/387 (4%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLF---IDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58 L++V ++ A V + ID D R D + + + ++ + G + + + Sbjct: 33 LKQVAKWTSIAILTPIIAATGVLAYGVKIDLADHRHDINQWLSSTLDRETTIGGDMSLTL 92 Query: 59 LPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 P + D+ + E K + + LPLLS +++ + + L+ Sbjct: 93 SFSPEIELSDVTVANTEAMKWEPMLKSGYIGAKISVLPLLSHTLKIDYLDLKDISLHLSK 152 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 ++G +NW + + E ++ + + + + L+ + ++ N+ Sbjct: 153 DNQGKANWVFAEQASEKPK----ETTQSTPFKLALSNNIRAEKVSVDYLDQH-TGQYANV 207 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 + + + GN + + + K+ +++ Sbjct: 208 YLDQLALTKPDKWLLQAKGNAMGNEYDVSLAGDLESLINEQQGKLDATGSFAGAKLNIDA 267 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELS-----AKKSRLSGNFKISDGNVRISRYKLQ 291 ++ + + L L A L+ S + ++ L Sbjct: 268 DIHPFHSSTPSKANVKLDWVDTAQLESLLDIDLRHAAPMSLTTQITASSKGISLADIALT 327 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 S + ++ D + + N +N N + + + Sbjct: 328 SPITSAKGFLDISLAQNAKDLNHINGKLNIPLIDL----RPWLQPQPPVMYGVGYAAAAP 383 Query: 352 QYSVNKKEEKDNSHDKENQENFSGDKM 378 Q S +K E + S D++ Sbjct: 384 QQSPLQKALDQWLVKTETHLDLSVDEI 410 >gi|297568041|ref|YP_003689385.1| AsmA family protein [Desulfurivibrio alkaliphilus AHT2] gi|296923956|gb|ADH84766.1| AsmA family protein [Desulfurivibrio alkaliphilus AHT2] Length = 992 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 60/206 (29%), Gaps = 19/206 (9%) Query: 18 VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG 77 VG ID + + G+ ++++G + + P + + + Sbjct: 20 VGLVAAVHLIDINRHHDRIAQVVYDQTGRTLSIEGDFEWGLWPELYLKGGPLSLGNAPGF 79 Query: 78 S--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-------- 127 +E PL E+ + + + LN + +G+ NW Sbjct: 80 DREPFFHLESFHFSVTTWPLRRSEVHLQTLQVAGLQLNLERNQEGIGNWEDLAAEPDPAP 139 Query: 128 ---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + L I + + DQ S Q +SDL L + A Sbjct: 140 AARPHKKKDPGAGLPFAALALGGIQIDRVNVNWYDQASGQQAHISDLRLTVGALQFGEPM 199 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAF 204 L ++ S E + + + Sbjct: 200 QLELEFTAASNQPELEVAANAQATLL 225 >gi|90578314|ref|ZP_01234125.1| hypothetical protein VAS14_14724 [Vibrio angustum S14] gi|90441400|gb|EAS66580.1| hypothetical protein VAS14_14724 [Vibrio angustum S14] Length = 1318 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 48/381 (12%), Positives = 117/381 (30%), Gaps = 21/381 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLF---IDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58 L++V ++ A V + ID D R D + + + ++ + G + + + Sbjct: 29 LKQVAKWTSIAILTPIIAATGVLAYGVKIDLADHRHDINQWLSSTLDRETTIGGDMSLTL 88 Query: 59 LPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 P + D+ + E K + + LPLLS +++ + + L+ Sbjct: 89 SFSPEIELSDVTVANTEEMKWEPMLKSGYIGAKISVLPLLSHTLKIDYLDLKDISLHLSK 148 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 ++G +NW + + E ++ + + + + L+ + ++ N+ Sbjct: 149 DNQGKANWVFAEQASEKPK----EATQSTPFKLALSNNIRAEKVSVDYLDQH-TGQYANV 203 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 + + + GN + + + K+ +++ Sbjct: 204 YLDQLALTKPDKWLLQAKGNAMGNEYDVSLAGDLESLINEQQGKLDATGSFAGAKLNIDA 263 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELS-----AKKSRLSGNFKISDGNVRISRYKLQ 291 ++ + + L L A L+ S + ++ L Sbjct: 264 DIHPFHSNTPSKANVKLDWVDTAQLESLLDIDLRHAAPMSLTTQITASSKGISLADIALT 323 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETD----FFEEEEKKNKNDD 345 S + ++ D + + N +N N L + Sbjct: 324 SPITSAKGFLDISLAQNAKDLNHINGKLNIPLIDLRPWLQPQPPVMLGVGYAAAAPQKSP 383 Query: 346 LKKDDIQYSVNKKEEKDNSHD 366 L+K Q+ V + D S D Sbjct: 384 LQKALDQWLVKTETHLDLSVD 404 >gi|33598218|ref|NP_885861.1| hypothetical protein BPP3706 [Bordetella parapertussis 12822] gi|33566776|emb|CAE38989.1| exported protein, conserved [Bordetella parapertussis] Length = 736 Score = 99 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 51/153 (33%), Gaps = 16/153 (10%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQ 73 +DW + QA+ +G+ A++G + + +P+P D+ I Sbjct: 28 TLDWNRLKPTINEQASAALGRPFAIQGDLSVQWAREPGQGGWRGWVPWPHFVVHDVAIVN 87 Query: 74 KEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--RKS 129 + R LPLL + + + + + + GV+NW + Sbjct: 88 TVWARDPNLLTLRRGEFRLAPLPLLRQRVVIRRIQLSGLRADLQRRADGVANWEFTMPDT 147 Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 V ++ I G I+ D + + Sbjct: 148 GEPSPWKVDIDAIGFDQGAIRYADAIAQADLDV 180 >gi|118579201|ref|YP_900451.1| AsmA family protein [Pelobacter propionicus DSM 2379] gi|118501911|gb|ABK98393.1| AsmA family protein [Pelobacter propionicus DSM 2379] Length = 1070 Score = 99 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 102/347 (29%), Gaps = 28/347 (8%) Query: 1 MLRRVLI-----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55 ML+R+ I L FL S ++ A +P ID +R+D + + ++ G Sbjct: 1 MLKRLHIRLPALLLLFLVSGLIGLALFLPRLIDVNAYRDDIITSLRQELNRDVSF-GRGT 59 Query: 56 IHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + P+ F D+ + +K G + +S+ LPLL I + + ++ L Sbjct: 60 FSMKFGPTFTFDDLSVREKGGGD-FLRATRVSVHLALLPLLEKRIVLRTVVVEGADLRLE 118 Query: 116 LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ----------VYFLSDL 165 + G N + + L K+ V GG ++ D+ + LS + Sbjct: 119 RDAAGRLNIDDLLVPRPGAYKLQLRKVQVNGGVLRWRDRSVAKDGFQAEARISTLLLSGI 178 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK-------ITANFPAKNKAIS 218 S L++ G + G+ + + Sbjct: 179 RPGKRGTVKLECSLLALSGAPGQISLSGSVRLPDSGRPLSTLELDMDAHIRRFDAGRFWP 238 Query: 219 LKIQLFP-LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL-SGNF 276 P +D+ + +Q G +AG + RL + Sbjct: 239 YYGSHIPFGPTGGRLDISTSFKGTPRQFSARGTLRLAGVSVNWPTVFHHPVNPRLAQLQY 298 Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 ++ I L ++ + + Sbjct: 299 ELKREKNVIDMPLLHF--SADGFTVRGSCRIQDVNGPDPRITARASS 343 >gi|67639111|ref|ZP_00438013.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4] gi|238519656|gb|EEP83125.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4] Length = 539 Score = 99 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 86/287 (29%), Gaps = 27/287 (9%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66 G+G L +V G F R E+Q + + + + +I P+ + Sbjct: 28 GVGALIVLVAFGLLG--FFAAPPLIRHIAEQQLSQQLERPATIA---RIAFNPYTLRLEA 82 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125 +R+ ++ I L +RA + L + ++ +DQP N+ Sbjct: 83 DGVRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTD 142 Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + I V GRI+ D+ + + + + I Sbjct: 143 LVDKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSK 202 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237 V + D A A+++ S+ ++ L P ++ Sbjct: 203 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTK 256 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 L + + S V + R+SG ++D V Sbjct: 257 LPVDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297 >gi|118592445|ref|ZP_01549837.1| AsmA [Stappia aggregata IAM 12614] gi|118435103|gb|EAV41752.1| AsmA [Stappia aggregata IAM 12614] Length = 958 Score = 99 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 45/328 (13%), Positives = 111/328 (33%), Gaps = 45/328 (13%) Query: 15 VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74 ++ VPLF+ + + Q G ++ + G + + + P S+ +DI + + Sbjct: 3 LLATIILVVPLFLPKDEIKRQVVEQVDKRFGWRVRLDGPVSLSLFPGFSLVAEDIGLAGE 62 Query: 75 EDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMD 132 ++ E + + L+SG I+V + +D+P + + G ++W R+ D Sbjct: 63 AGADGIEFARAERVEFGLAWGGLVSGNIQVTGIALDKPDIYLEIGPNGTTSWEPRRDISD 122 Query: 133 ---------------------------------------MIHNVILEKIHVKGGRIKIID 153 + ++ ++ + + GG + Sbjct: 123 IGDLIEAETGAAETDAVAEAAPAPASEAEPDETAAAPDGYLKSIGVDSLQITGGTVTYKA 182 Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213 ++ + +S+L+L + A L+ L+ + TG+ + P Sbjct: 183 PDAAEPIRISNLDLSLQAPSLSGEVDLTSSFTFREMPVAVTGSLTD-PLGLMGGEQVPVD 241 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL--LNLELSAKKSR 271 K S + + + + L P + ++AG +SAK + Sbjct: 242 LKISSGENSVSVTGQSGLDPVRAELALTAAGPSLKALAALAGQDLAADPGAFAVSAKVAG 301 Query: 272 LSGNFKISDGNVRISRYKLQSILPNSST 299 ++D ++ + + L ++ Sbjct: 302 TEAMLSLADLDITLGQLSL-GGAADADL 328 >gi|134292377|ref|YP_001116113.1| hypothetical protein Bcep1808_3663 [Burkholderia vietnamiensis G4] gi|134135534|gb|ABO56648.1| protein of unknown function DUF748 [Burkholderia vietnamiensis G4] Length = 1292 Score = 99 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 97/291 (33%), Gaps = 28/291 (9%) Query: 3 RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 RR+ IG+ V L+G F P I R E+Q + + + ++ +I + P+ Sbjct: 26 RRIGIGVLIFVIVFGLLGFFAAPPLI-----RHLAEQQLSKQLDRPSTIR---RIALNPY 77 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 ++ + I ++ I L +R + LL G V ++ +D P + Sbjct: 78 TLNLEADGVHIGERGGRGDFIDIGKLVVRPSWTSLLRGAPIVNELRVDSPRFHIVRYDAQ 137 Query: 121 VSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 N+ + I V GRI D+ ++ + + + L I Sbjct: 138 RLNFTDLIEKFSTPSQPASKPTLFSVSNIQVNDGRIDFDDRLLNERHVVDNWTLGIPFIA 197 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 V + FD A A+++ + + L P +I Sbjct: 198 TLPSKTDIF------VQPKLRARFDGSPIAIDGRTKPFAQSRESEVTLTFDRLDVPKLIS 251 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + SG+ S + K + + R++G ++D V Sbjct: 252 ---YAPTKLPVVVTSGLLS-SNLTLKFV-MSGDTPSLRVAGTVDLNDAKVT 297 >gi|218515007|ref|ZP_03511847.1| hypothetical protein Retl8_15599 [Rhizobium etli 8C-3] Length = 380 Score = 99 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 60/142 (42%), Gaps = 1/142 (0%) Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 G EG D + F I+++ P + + ++ +L P +P+ IDL G L +++P Sbjct: 1 AGPWRIEGDAALDGEHGKFSISSSQPDEKGVLHMRTKLSPDKHPVNIDLDGELKLVDRKP 60 Query: 246 IYSGVFSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 Y G S A + + + + R+ G F++++ +RI Y+++ + + Sbjct: 61 NYQGQLSAAIEHRNSAKSANKNEQPPRVKGRFELTNERIRIPEYRMEIGPTDDPYVITGE 120 Query: 305 TKVSQDEENLLNFSENGAESMH 326 + + +G + Sbjct: 121 ATLDTGNAPEFLLTADGQQIDV 142 >gi|163758102|ref|ZP_02165190.1| hypothetical protein HPDFL43_00715 [Hoeflea phototrophica DFL-43] gi|162284391|gb|EDQ34674.1| hypothetical protein HPDFL43_00715 [Hoeflea phototrophica DFL-43] Length = 600 Score = 99 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 41/296 (13%), Positives = 90/296 (30%), Gaps = 25/296 (8%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK-- 74 L A +VPL + R+ ER G +++ + P P++ ++ I Sbjct: 2 LAIAVSVPLAVSSGVVRDRLERDIGGWAGHAVSLGDAPSLDFWPTPTIKLDNVVISPATF 61 Query: 75 EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134 DG + + + ++G + + +P N L G SNW + + Sbjct: 62 ADGDPILRADSIVANFNLFSAIAGAPSFTEFRLIRPTFNLELYPDGTSNWSSSQGQLAQG 121 Query: 135 HNVILEKIHVKG------GRIKIIDQESDQVYFLSDLNLQI-------SARFLNIISPLS 181 L + + I D + + D L+ + R I L+ Sbjct: 122 IESALARHQAEQAGEPIPASAIIPDSAALGTVTIEDGTLRWIRDPGAEAERLTAINGSLA 181 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFP-AKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 + A+ T F ++ K + + P + ++L + P+ ++ G+ Sbjct: 182 WTAPSAPARADITAIFRGEQMTLKGSTSAPLLFFGKNTAPVELQLSSPPLTLEFNGSASL 241 Query: 241 NEKQPIYSGVFSVAGDFSK--------LLNLELSAKKSRLSGNFKISDGNVRISRY 288 SG + + + + L+ ++ Sbjct: 242 -GPDLYGSGALRLFSPSVRRALEWSGADIKPGEALGALELTAQLSAEPTRAKLDDL 296 >gi|319794167|ref|YP_004155807.1| hypothetical protein Varpa_3512 [Variovorax paradoxus EPS] gi|315596630|gb|ADU37696.1| protein of unknown function DUF748 [Variovorax paradoxus EPS] Length = 1253 Score = 99.6 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 45/368 (12%), Positives = 103/368 (27%), Gaps = 29/368 (7%) Query: 15 VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74 +VL+ + + + ++ A+ +G+++ V G I + D+RI Sbjct: 2 LVLLALWVIAWLAVPPVAKSQLQKIASEKLGRQVTV-GKIDFKPW-TLELALHDLRIATA 59 Query: 75 EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------- 125 + + I+ + AE L + + I+ P + + G + Sbjct: 60 DGKQPQLAIKRIYADAELQSLFRLAPVIDAVSIESPAILLTHQADGKYDIDDILAKLASG 119 Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 + I +K G + DQ + + L + L + Sbjct: 120 PPPDPKAEPARFAIYNISIKDGAVDFDDQTVKRKHELRNFVLNVP------FLSNLASQR 173 Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PIIIDLFGNLFWNEKQ 244 + + + + ++ +Q L P + + G L + Sbjct: 174 EVKTEPKLAFVLNGSNFDSAAFTTPFSASRKTDAHVQFKGLDLVPYLGYIPGGLPVKLQA 233 Query: 245 PIYSGVFSVAGDFSKLLNLEL-------SAKKSRLSGN--FKISDGNVRISRYK-LQSIL 294 + + L++ AK S G + ++ + L+S+ Sbjct: 234 GSLDADLKIDFQQATTTGLKIYGTVEAHGAKLSDARGRDLLSFDSLKLALADVRPLESVF 293 Query: 295 PNSSTDEDN-KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353 S N + V++D LN + +K + Sbjct: 294 HLSEVALANPQLVVARDASGQLNLMATDPATDAAEKVAPLPVAPASAPAGQTAEKPKLNV 353 Query: 354 SVNKKEEK 361 V+K Sbjct: 354 QVDKVALS 361 Score = 56.8 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 79/280 (28%), Gaps = 29/280 (10%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 +V ++ + L + + L + ++ + P L + G Sbjct: 257 TVEAHGAKLSDARGRD-LLSFDSLKLALADVRPLESVFHLSEVALANPQLVVARDASGQL 315 Query: 123 NWFQRKSTMDMIH-----------------------NVILEKIHVKGGRIKIIDQESDQV 159 N D NV ++K+ + GGRI D+ Sbjct: 316 NLMATDPATDAAEKVAPLPVAPASAPAGQTAEKPKLNVQVDKVALSGGRIGWRDETVKPA 375 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 + +L + + G+ IA + F + +SL Sbjct: 376 AAVDLTDLGLDVTAITWPMEKPAQFNGGTAIAGASLKFKGSATDKVADVQTEVDALPLSL 435 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 + +D + + + F + L L + G F++ Sbjct: 436 AAPYLAQSLEPTLDGKLSGQIDIAWNQPNLKFKARRLAADGLALTQTKTALASVGRFELV 495 Query: 280 DGNVRISRYKLQSILPNSSTDEDN-KTKVSQDEENLLNFS 318 D V ++++ L +S N K +V +D E F Sbjct: 496 DAEVDMTQHTLNI----ASFTATNPKVRVERDSEKRWMFE 531 Score = 41.8 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 28/289 (9%), Positives = 70/289 (24%), Gaps = 50/289 (17%) Query: 49 AVKGGIKIHIL-PFPSVFFKDIR---IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFD 104 + G I I P + + + + + + + + + + + + Sbjct: 451 KLSGQIDIAWNQPNLKFKARRLAADGLALTQTKTALASVGRFELVDAEVDMTQHTLNIAS 510 Query: 105 MYIDQPHLNFYLSSKGVSNW---------------------------FQRKSTMDMIHNV 137 P + S+ + + + Sbjct: 511 FTATNPKVRVERDSEKRWMFERWLRTPAGNGGAAEAKVAAPKPAGAGSAKADANTKPWAL 570 Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLS----DLNLQISARFLNIISPLSIDSIKGSVIAE- 192 + + V G + D+ + LN Q A N +SPL + GS +E Sbjct: 571 TIATMAVDNGSLSYSDKAGALPVTVEVTAFKLNAQKIAPETNTVSPLQVSGRIGSGRSEP 630 Query: 193 GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS 252 G ++ + A + + A + +D+ Y+ Sbjct: 631 GKFDYKGNVVLKPLAAEGRLEVISFPAHAFKAYYADALNVDIRRAFASYRGTVHYT---- 686 Query: 253 VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 + +L+G+ + D ++ Sbjct: 687 ----------TTPAGMTVKLAGDTALDDFRANSVSLTQSPGFDRNTNQL 725 >gi|59801694|ref|YP_208406.1| hypothetical protein NGO1344 [Neisseria gonorrhoeae FA 1090] gi|240014592|ref|ZP_04721505.1| hypothetical protein NgonD_08084 [Neisseria gonorrhoeae DGI18] gi|240017037|ref|ZP_04723577.1| hypothetical protein NgonFA_07687 [Neisseria gonorrhoeae FA6140] gi|240081327|ref|ZP_04725870.1| hypothetical protein NgonF_08470 [Neisseria gonorrhoeae FA19] gi|240113536|ref|ZP_04728026.1| hypothetical protein NgonM_08211 [Neisseria gonorrhoeae MS11] gi|240118398|ref|ZP_04732460.1| hypothetical protein NgonPID_08033 [Neisseria gonorrhoeae PID1] gi|240121114|ref|ZP_04734076.1| hypothetical protein NgonPI_04954 [Neisseria gonorrhoeae PID24-1] gi|240123943|ref|ZP_04736899.1| hypothetical protein NgonP_08379 [Neisseria gonorrhoeae PID332] gi|240126143|ref|ZP_04739029.1| hypothetical protein NgonSK_07994 [Neisseria gonorrhoeae SK-92-679] gi|240128620|ref|ZP_04741281.1| hypothetical protein NgonS_08323 [Neisseria gonorrhoeae SK-93-1035] gi|254494134|ref|ZP_05107305.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|260440076|ref|ZP_05793892.1| hypothetical protein NgonDG_03140 [Neisseria gonorrhoeae DGI2] gi|268597429|ref|ZP_06131596.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268599601|ref|ZP_06133768.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268604110|ref|ZP_06138277.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268682568|ref|ZP_06149430.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268684729|ref|ZP_06151591.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268687008|ref|ZP_06153870.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|291043364|ref|ZP_06569087.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|293398668|ref|ZP_06642846.1| hypothetical protein NGNG_01333 [Neisseria gonorrhoeae F62] gi|59718589|gb|AAW89994.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|226513174|gb|EEH62519.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268551217|gb|EEZ46236.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268583732|gb|EEZ48408.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268588241|gb|EEZ52917.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268622852|gb|EEZ55252.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268625013|gb|EEZ57413.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268627292|gb|EEZ59692.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|291012970|gb|EFE04953.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291611139|gb|EFF40236.1| hypothetical protein NGNG_01333 [Neisseria gonorrhoeae F62] gi|317164664|gb|ADV08205.1| hypothetical protein NGTW08_1237 [Neisseria gonorrhoeae TCDC-NG08107] Length = 700 Score = 99.6 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 50/385 (12%), Positives = 115/385 (29%), Gaps = 29/385 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ + L L + +V + R ++ +KI+ I+ +LP Sbjct: 12 LKYAVAVLTMLLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIRRRLLPR 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I + + G ++ + + L S I+V + L G Sbjct: 71 PTVILKNLTITEPDGGRVAVSVKETKIGLSWKNLWSDRIQVEKWVVSGADLALTRDRNGA 130 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 N + +I V+ +++ Q L +++L + + + Sbjct: 131 WNIQDLFDGAKHSA--SVNRIIVENSTVRLN--FLQQQLILKEISLNLQSPDSSGQ---Q 183 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S V + + + ++ P + + + I I G+ Sbjct: 184 FESSGILVWRKLSVPWKSRGLFLSDGIGTPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-RY 288 + NL L+A+ L +G F R + Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPALALKNNSIKTGTVNGTFTAGGEYARWDGSF 302 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 KL +S ++S +F ++ L + + + L Sbjct: 303 KLDKANLHSGIANIGNAEISG------SFKTPRLQTNFSLGSPLVWSRDNGLDA-PRLHI 355 Query: 349 DDIQYSVNKKEEKDNSHDKENQENF 373 +Q +V++ + + + Sbjct: 356 STLQDTVDRLPQPRFISRLDGSLSI 380 >gi|260575309|ref|ZP_05843309.1| AsmA family protein [Rhodobacter sp. SW2] gi|259022569|gb|EEW25865.1| AsmA family protein [Rhodobacter sp. SW2] Length = 658 Score = 99.6 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 84/289 (29%), Gaps = 32/289 (11%) Query: 36 FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFL 93 R+ G+ +A +GG+ I P V + I E + E L++R + Sbjct: 34 AAREFGRATGRVLAFEGGVTPSIWPVLGVETGPVSISNAEWSDAGPMLRAEALAIRLDMG 93 Query: 94 PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----RKSTMDMIHNVILEKIHVKGGRI 149 LL GE+R+ + P L G NW + L+ V GG + Sbjct: 94 ALLGGEVRITGISAVGPVLLLERDKDGRGNWQFGGKGGGAGAASGAPFTLDLGTVTGGAV 153 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209 D+ + + L+ + + + S G + + + Sbjct: 154 HYTDRSTGRSLNLTGI-----------EAEAAFPSFTGPLDLTLKAAMNGQPLDVTAQIE 202 Query: 210 FPAKNKAISL-KIQLFPLAYPIIIDLFGNLF---------WNEKQPIYSGVFSVAGDFSK 259 A L + L + G + + V ++AG Sbjct: 203 SFGPFMAGQLVPMTLNATSGVARASFKGQMAASPLVAEGTLQADLADLAAVSALAGAGRP 262 Query: 260 LLNLELSAKKSRLSGNFKIS-----DGNVRISRYKLQSILPNSSTDEDN 303 L L A+ + +SG ++ + ++ D Sbjct: 263 NLPEGLGARNAAVSGALTLTAEGSLHLRAGTVTLDGNVLQGDADLTTDG 311 >gi|254805448|ref|YP_003083669.1| hypothetical protein NMO_1511 [Neisseria meningitidis alpha14] gi|254668990|emb|CBA07338.1| conserved hypothetical protein [Neisseria meningitidis alpha14] Length = 731 Score = 99.6 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 53/385 (13%), Positives = 114/385 (29%), Gaps = 32/385 (8%) Query: 4 RVLIGLGFLFSVVLVGAFT---VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 R+ + L ++L V + R ++ +KI+ I+ +LP Sbjct: 38 RLKYAVAVLTILLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLP 96 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 P+V K++ I + ++ + + L S I+V + L KG Sbjct: 97 RPTVILKNLTITEPGGNRTAVSVKETKIGLGWKNLWSDRIQVEKWVVSGAELALTRDRKG 156 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 V N + +I ++ +++ + LNLQ Sbjct: 157 VWNIQDLIDNPKRKA--SVNRIIIENSTVRLDLPQDRLTLKEVRLNLQSPDSSGQQ---- 210 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 +S V + + + ++ P + + + + I + G+ Sbjct: 211 -FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEAETALNGHRIAVSTTGSPTI 268 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-R 287 + NL L+A+ L +G F R Sbjct: 269 RFNAGGADAADLALRADTAFHNLHLTAQIPALALRNNGIKIETVNGAFTAGGEYARWDGS 328 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347 +KL +S ++S +F ++ LN + E + + L Sbjct: 329 FKLDKANLHSGIANIGNAEISG------SFKTPRHQTNFSLNSPLVWTENKGLDA-PRLY 381 Query: 348 KDDIQYSVNKKEEKDNSHDKENQEN 372 +Q +VN+ + + + Sbjct: 382 VSTLQDTVNRLPQPRFISRLDGSLS 406 >gi|58426029|gb|AAW75066.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 311 Score = 99.6 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 70/209 (33%), Gaps = 14/209 (6%) Query: 67 KDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124 + + + +++ + E PLL G++R+ ++ ++ P L + Sbjct: 4 ERLSLGNASWSKRGAMAELNAAEIDVELWPLLRGKLRLPEIRLEHPTLLLEAGNDSHPGN 63 Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 + + L ++ V GR++ ID S + +N ++P S D Sbjct: 64 WVFDQSHSDSSMPRLGRLLVNNGRLQYIDDASRSDVDV----------AINSLAPPSSDQ 113 Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNE 242 + +G G + A K P + +I L A + G L Sbjct: 114 RAAPISIDGKGRWKGYPFALKGNTASPLELSQSEHPFRIDLRGSAGATRTHVRGTLTNPF 173 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSR 271 + ++ +++G L L S Sbjct: 174 QLRVFDLQMALSGQDMADLYLLASQYHPH 202 >gi|94970883|ref|YP_592931.1| AsmA [Candidatus Koribacter versatilis Ellin345] gi|94552933|gb|ABF42857.1| AsmA [Candidatus Koribacter versatilis Ellin345] Length = 862 Score = 99.6 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 37/275 (13%), Positives = 79/275 (28%), Gaps = 32/275 (11%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66 + ++ +L+G F +P FI+ +R + VG+ V G +++ +LP P Sbjct: 23 KIMFWIVVAILLGIF-LPPFINVNRYRARIASSISNAVGRPATVGG-VELRLLPQPGFDL 80 Query: 67 KDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124 ++ I S + E ++ L G + V + + P LN S G N Sbjct: 81 HNVEIADDPSISPEYLLRAEEVTAYLRLSSLWRGRLEVARLNLTDPSLNVVRSDDGRWNL 140 Query: 125 ------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI--- 169 I G RI + + ++ +L + Sbjct: 141 ETLLSRTTQIPSAPTAQAHPESARRRFPYIEATGARINFKFGLEKKAFTFTEADLALWLA 200 Query: 170 ------------SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217 +R ++ ++GS + + + + + Sbjct: 201 AENSWHMRLEAKPSRVDTKVTDTGSIKMEGSFERNSQLRYTPVKFSINWRDAQLGQVTKL 260 Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS 252 L + + G+ + I Sbjct: 261 -LSGADHGWRGGTTLSITGSGTPADLAVIADVRVD 294 >gi|240116114|ref|ZP_04730176.1| hypothetical protein NgonPID1_07696 [Neisseria gonorrhoeae PID18] gi|268601780|ref|ZP_06135947.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268585911|gb|EEZ50587.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] Length = 700 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 50/386 (12%), Positives = 115/386 (29%), Gaps = 32/386 (8%) Query: 4 RVLIGLGFLFSVVLVGAFT---VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 R+ + L ++L V + R ++ +KI+ I+ +LP Sbjct: 11 RLKYAVAVLTMLLLAAIGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIRRRLLP 69 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 P+V K++ I + + G ++ + + L S I+V + L G Sbjct: 70 RPTVILKNLTITEPDGGRVAVSVKETKIGLSWKNLWSDRIQVEKWVVSGADLALTRDRNG 129 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 N + +I V+ +++ Q L +++L + + + Sbjct: 130 AWNIQDLFDGAKHSA--SVNRIIVENSTVRLN--FLQQQLILKEISLNLQSPDSSGQ--- 182 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 +S V + + + ++ P + + + I I G+ Sbjct: 183 QFESSGILVWRKLSVPWKSRGLFLSDGIGTPEIS-PFHFEASTSLDGHGITISTTGSPSV 241 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-R 287 + NL L+A+ L +G F R Sbjct: 242 RFNAGGADAAGLGLRADTSFRNLHLTAQIPALALKNNSIKTGTVNGTFTAGGEYARWDGS 301 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347 +KL +S ++S +F ++ L + + + L Sbjct: 302 FKLDKANLHSGIANIGNAEISG------SFKTPRLQTNFSLGSPLVWSRDNGLDA-PRLH 354 Query: 348 KDDIQYSVNKKEEKDNSHDKENQENF 373 +Q +V++ + + + Sbjct: 355 ISTLQDTVDRLPQPRFISRLDGSLSI 380 >gi|116696007|ref|YP_841583.1| hypothetical protein H16_B2071 [Ralstonia eutropha H16] gi|113530506|emb|CAJ96853.1| conserved hypothetical membrane protein [Ralstonia eutropha H16] Length = 1329 Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 30/342 (8%), Positives = 92/342 (26%), Gaps = 40/342 (11%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 R+ + L F + E+ AT +G+K+ + G + + Sbjct: 26 RLTTRVAGGVVAALAVFGLAGYFGGPPLLKYLIEKNATDALGRKVTL-GRAHVRPF-ELA 83 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 D+ I +++ + + + V ++++D+ ++ + G + Sbjct: 84 ATLTDLTIYERDGKTPALTLGEAEANTSLASVWHLAPVVDNLHVDRLAVHVVRDADGRMS 143 Query: 124 WFQRKST---------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + + + I V G D++ + +L L + Sbjct: 144 FADVQEKLAALPPKPPDAKPARFSVNNIAVTGSSFGYDDKQLGSSLRVDNLTLTLPFLSN 203 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 + + + A A ++ L + L L ++ Sbjct: 204 LPHDVEIVT------RPTLSARVNGTPLALDGEVLPFADSRQTRLNVNLDGLEVARLMAF 257 Query: 235 -----FGNLFWNEKQPIYSGVFS----------VAGDFSKLLNLELSAKKSRL-SGNFKI 278 + + + F + + + + + SG + Sbjct: 258 APPLRDAEVKSGKLDTRLTVAFRQQKDTQEMLVMGTAALRDAEVVTRVGQPLVKSGRLAV 317 Query: 279 SDGNV-------RISRYKLQSILPNSSTDEDNKTKVSQDEEN 313 G + ++ +++ + ++ D ++ Sbjct: 318 DIGKLEPLAHRAQLRSVEIEGLGVEAARRADGSLNLATAFLP 359 >gi|239999415|ref|ZP_04719339.1| hypothetical protein Ngon3_08012 [Neisseria gonorrhoeae 35/02] gi|268595235|ref|ZP_06129402.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268548624|gb|EEZ44042.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] Length = 700 Score = 99.2 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 51/385 (13%), Positives = 115/385 (29%), Gaps = 29/385 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ + L L + +V + R ++ +KI+ I+ +LP Sbjct: 12 LKYAVAVLTMLLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIRRRLLPR 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V K++ I Q + G ++ + + L S I+V + L G Sbjct: 71 PTVILKNLTITQPDGGRVAVSVKETKIGLSWKNLWSDRIQVEKWVVSGADLALTRDRNGA 130 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 N + +I V+ +++ Q L +++L + + + Sbjct: 131 WNIQDLFDGAKHSA--SVNRIIVENSTVRLN--FLQQQLILKEISLNLQSPDSSGQ---Q 183 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S V + + + ++ P + + + I I G+ Sbjct: 184 FESSGILVWRKLSVPWKSRGLFLSDGIGTPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-RY 288 + NL L+A+ L +G F R + Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPALALKNNSIKTGTVNGTFTAGGEYARWDGSF 302 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 KL +S ++S +F ++ L + + + L Sbjct: 303 KLDKANLHSGIANIGNAEISG------SFKTPRLQTNFSLGSPLVWSRDNGLDA-PRLHI 355 Query: 349 DDIQYSVNKKEEKDNSHDKENQENF 373 +Q +V++ + + + Sbjct: 356 STLQDTVDRLPQPRFISRLDGSLSI 380 >gi|150395541|ref|YP_001326008.1| AsmA family protein [Sinorhizobium medicae WSM419] gi|150027056|gb|ABR59173.1| AsmA family protein [Sinorhizobium medicae WSM419] Length = 608 Score = 99.2 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 95/325 (29%), Gaps = 27/325 (8%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI-DQKEDGSFESKIEG 85 + T+ R ER G K + G ++ P P + I + ++I Sbjct: 45 VSTTEARAAMERMLDDWSGGKSTISGEPEVRFWPEPLLTLPMATIVTSGPEQRPLAEIGR 104 Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-----QRKSTMDMIHNVILE 140 ++ L L GE + ++ + +P + + G NW T + Sbjct: 105 ITASFSVLSALRGEQALEEVTLVEPVITLERGADGTVNWQKPRWLVPPDTTIPQDEAPVG 164 Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200 I ++ GR++IID+ + I L S G + + + + Sbjct: 165 DITIENGRVRIIDRMAAN---------GGGIDIAGISGTLKWPSFGGRLSTQFSATIGGE 215 Query: 201 RSAFKITANFPAKNKAIS-LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259 + + P A ++ + P+ G + SG ++ Sbjct: 216 QIGWAFVCEEPLALFAGRNAALKTSLTSAPLTFSFEGTGNLPPQLFA-SGHLQMSAPSLA 274 Query: 260 LLNLE--------LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE 311 L L A + S+ +++ +L ++ D ++ + Sbjct: 275 RLAAWYRNVPDAGLPAGGFSIDTKVDTSETALKLEDLQLAIGGAAATGVLD--VQLGSGK 332 Query: 312 ENLLNFSENGAESMHDLNETDFFEE 336 + + + + Sbjct: 333 RPRVEGTLAFDRIDLNGLPLAALKP 357 >gi|268680364|ref|YP_003304795.1| hypothetical protein Sdel_1745 [Sulfurospirillum deleyianum DSM 6946] gi|268618395|gb|ACZ12760.1| Uncharacterized protein involved in outer membrane biogenesis [Sulfurospirillum deleyianum DSM 6946] Length = 482 Score = 99.2 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 51/408 (12%), Positives = 124/408 (30%), Gaps = 39/408 (9%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M ++V++ + F+ +V F + ID+ +++ ++ G ++ +KG I + + P Sbjct: 1 MFQKVVLSIVLFFAFSIVAFFLLIKVIDFNEYKPRLQKMIKDATGYELIIKGDITLSLSP 60 Query: 61 FPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 + DI + + + ++ + E PLL+ EI++ + +D L + Sbjct: 61 -VGISVLDIEVFNPHEKEKGAFATLKSFDVALEVAPLLTKEIKIHYLSLDSLALTLEKNE 119 Query: 119 KGVSNWFQRKSTMDM-----------------IHNVILEKIHVKGGRIKIIDQESDQVYF 161 + N+ + + V +++I + D + Sbjct: 120 QEQFNFELPTVSKKEEAKPSTEQNTTLEKAPLLPLVNVKEIKFSNAHVSYHDVRQKETLQ 179 Query: 162 LSDLNLQISARFLN------IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215 + +N I + D+ GS+ G ++ ++ Sbjct: 180 IKGINFDIDNIHYDPSKHKFQGLSFIADASIGSLNY-GEYGIKEIYMPLEMK-ESVLSSE 237 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 + + P + IDL G + +A ++L E+ K+ Sbjct: 238 NVQFTLFETPSQGTLKIDLSGKQPKLSLKSKLE-QLKLAQVSKEILKKEILEGKANADLK 296 Query: 276 FKIS-DGNVRISR-YKLQSILPNSSTDEDN----KTKVSQDEENLLNFSENGAESMHDLN 329 + + + + K S D L+ + Sbjct: 297 LSFFLNDTLTFKNTVNGFIHVSGENVTFKGYDIDKIVTSVDASKGLSMML----LNVIKS 352 Query: 330 ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 + ++ N D+ ++ S N + N +K Sbjct: 353 TQEAKTLLKEVNAKVDIGYSEVHLSDVAASTAKNRLAIKGSVNIVEEK 400 >gi|49475194|ref|YP_033235.1| hypothetical protein BH03950 [Bartonella henselae str. Houston-1] gi|49237999|emb|CAF27204.1| hypothetical protein BH03950 [Bartonella henselae str. Houston-1] Length = 624 Score = 99.2 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 56/419 (13%), Positives = 124/419 (29%), Gaps = 71/419 (16%) Query: 1 MLRRVLIGLGFLFSVVLV----GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 M R++ L +F ++V G +P + R + ++ G + ++ ++ Sbjct: 1 MRARIIKFLSGIFITIVVLFEVGILILPYLVSTDTIRIRLAQDLSVWTGYNVELRDPPRL 60 Query: 57 HILPFPSVFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 +I P+P + I + K + + + E + + + LLSG I + I +P Sbjct: 61 NIFPYPKAYLSGITLISKMNNAAPLMEAESIEVDLSLVDLLSGHISFSETRIVRPQFVME 120 Query: 116 LSSKGVSNWFQRKSTMDMIHNVIL------------------------EKIHVKGGRIKI 151 K V+++F R S + + +I ++ G + Sbjct: 121 KPVKTVADFFARFSRSRGALGLAIRNAREILKHNPDKPDTKRLLKQPFGRIVIENGILVY 180 Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP 211 D S ++ LN + + + + + I A+ Sbjct: 181 HDSISGIAEKITGLNAVLDWPESTQEA-----------RFHADARWRGELTKLSINADQA 229 Query: 212 ---AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268 +K L + I G ++E ++ G S+ Sbjct: 230 LLLLAGGKSQVKASLNSVRGG--ITFIGQARFSE-YYVFDGKVSMR--SPGWNQTLAWIG 284 Query: 269 KSRLSG-----------NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE-ENLLN 316 ++ G F ++++ N+ +V + ++ Sbjct: 285 DNQFWGHQLKEPIVWESRFVAQPMHIQMDNVAFTMGTANA----RGALEVDFQDYVPIII 340 Query: 317 FSENGAESMHDLNETDFFEEEEKKNK-------NDDLKKDDIQYSVNKKEEKDNSHDKE 368 S DL + F +EK D++ Q V D + + Sbjct: 341 GSLAFDNLDFDLLRSVFSSVKEKNQFLDMADRIGVDVRLSAPQAKVGNVVLTDLAAAIQ 399 >gi|149376060|ref|ZP_01893826.1| hypothetical protein MDG893_03740 [Marinobacter algicola DG893] gi|149359697|gb|EDM48155.1| hypothetical protein MDG893_03740 [Marinobacter algicola DG893] Length = 733 Score = 99.2 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 49/365 (13%), Positives = 107/365 (29%), Gaps = 39/365 (10%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLS 87 D ++ E+ + + G I +P + D+ ++ K+E L Sbjct: 30 DPNTYKPQIEKVVENKTNLDLILAGDIGWSFIP-LGLELNDVEATLED--ERLVKLEQLV 86 Query: 88 MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------------------- 124 + F L++ RV + N + G NW Sbjct: 87 AQVSFWSLVTMSPRVDTFLLSGLDANLSVDKNGNGNWTRIMPEGEEQPQQEDPAAPAETA 146 Query: 125 --FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 ++S N +E + + R+ D+ + Q + L D + S L PL + Sbjct: 147 EEQPKESGTSKPLNFNVENVEISNARVHYEDKGTGQAFTLEDFTVNASEITLGSSFPLGV 206 Query: 183 DSI--KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PIIIDLFGNLF 239 E G+ + +A + F + + P + ++ G+L Sbjct: 207 SFRFATNQPQFEVQGDISARLAANEALNEFGVSDLEAIFDMNGEPFGGESVRAEIAGSLE 266 Query: 240 WNEKQPIYSGV-FSVAGDFS---KLLNLELSAKKSRLSGNFKISDGNVR--ISRYKLQSI 293 N + + F+ + L + K +L G+ I + +++ ++ +I Sbjct: 267 ANLENETATLNGFTASLADLKLNTDLTVNGFGDKPQLEGSLSIDEFSLKALLAALGQPAI 326 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353 + + D +T F N + + Sbjct: 327 ETEDPDVMKAVAFSTNIGGPAGTVELSDLTISLD--DTTFQGSASYALANSAIGLNLQGD 384 Query: 354 SVNKK 358 ++N Sbjct: 385 AINAD 389 >gi|213962601|ref|ZP_03390862.1| AsmA family protein [Capnocytophaga sputigena Capno] gi|213954596|gb|EEB65917.1| AsmA family protein [Capnocytophaga sputigena Capno] Length = 892 Score = 99.2 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 49/385 (12%), Positives = 114/385 (29%), Gaps = 28/385 (7%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58 + +++ G ++++ +P F +E A + +A++ + I + Sbjct: 3 IAKKIFKWGGITLLLLIIAMIAIPFFF-KDTIKEKVIEMANKNLKANLALQ-DVDISLFK 60 Query: 59 -LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 P V D + KE G + + + LL+G + + + + Sbjct: 61 NFPKAQVTLNDFVLVNKEPFVGDTLFAAKHIDVTLSIKDLLAGNYNLLGANVKDASVYIH 120 Query: 116 LSSKGVSNWF-----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 L+ +GV N+ + + +++ +V+ + + + ++D+ Sbjct: 121 LNKEGVGNFDIAIPSDKPEEESAPIKLDIQQYNVENLKFTFKMDDGNLFMEVADIYHSGK 180 Query: 171 ARFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 F + L + + + + + KN+ + K Q Sbjct: 181 GNFAEEVLDLDTQTKANVTFAMDKSTFMKQVPITLQAILGIDLKNQKYTFK-QNKATVNR 239 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNL-----ELSAKKSRLSGNFKISDGNV 283 + + G + E+ Y FS F L L S + + +GN + Sbjct: 240 LDLVFDGFIQLLEEGQRYDLTFSTPTNSFQNFLALIPEEYSKSIENVKTTGNLTL--KGF 297 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343 I + + + L + +N T + K N N Sbjct: 298 AKGDMVGDKIPT---FGLEMYADNASFKYPNLPKTVRDITIDLKVNNTTGITNDTKVNLN 354 Query: 344 D---DLKKDDIQYSVNKKEEKDNSH 365 + +D N N Sbjct: 355 KFTMSIDQDHFSARANVSNIVVNPF 379 >gi|163858293|ref|YP_001632591.1| putative secreted protein [Bordetella petrii DSM 12804] gi|163262021|emb|CAP44323.1| putative secreted protein [Bordetella petrii] Length = 840 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 37/344 (10%), Positives = 93/344 (27%), Gaps = 42/344 (12%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82 L D ++ E + +A+ G +++ + P + + + + + + + Sbjct: 26 FLLTFDPNAYKYKLEELVQERYHRTLAIDGELELSLFPRIGLSVQGVSLSEVDSPDTFAS 85 Query: 83 IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF----------------- 125 IE + + PLLS + V + I+ G N+ Sbjct: 86 IESMRLAVAVWPLLSSNLVVDHVAINGFKARVVRDKNGHLNFENLVGGGAANTLEPAGPA 145 Query: 126 ---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + + + + ++ G +++ D+ S +++LN Sbjct: 146 TAAVGAMAGAAQAIATGGAAAPATMQIDIAGLDLQAGELQLQDEISGMAVAVTNLNANTG 205 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL-AYP 229 N +S+ + N + + + +++ L A Sbjct: 206 RVTYNQPFDVSLSARVEGGNPRIDANLTGQGLLTLDPLAKRFAAQKLDVRMDGNVLGAEA 265 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 + GNL +N + VAG ++ + I +K Sbjct: 266 KSLAARGNLAFNGRTSSLD----VAGLEIVFQGDVPDPATPMKGVEASVAIPKLAIDPHK 321 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 LQ + + + + + Sbjct: 322 LQLQIEKLAVRAKGSLT-----GGPFELAADAPALNISPSSATG 360 >gi|152982071|ref|YP_001354952.1| hypothetical protein mma_3262 [Janthinobacterium sp. Marseille] gi|151282148|gb|ABR90558.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 1110 Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 110/338 (32%), Gaps = 34/338 (10%) Query: 3 RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 RR LIGL + ++ L G F +P I + E+ T + ++ ++ K+ + P+ Sbjct: 23 RRTLIGLLAVIVLIGLFGYFALPGII-----KSQAEQIITEKLHRQTSIG---KVEVNPY 74 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + D+++ + E + E L + + LL + + + P+++ Sbjct: 75 TMRLTIHDMKLMEPEGDLTFASFEKLMVNVSYKSLLRFAPVIEQVQLSTPYVHLVRKDAA 134 Query: 121 VSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 +N + I + G I++ D+ + + ++DL L + Sbjct: 135 RTNIDDIIELINSQPPSPEPARFSAFNIEIDKGHIELDDKTAQTKHEITDLKLGVPFISS 194 Query: 175 NIISP-------LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA-----ISLKIQ 222 LS + ++ +G + + N + + Sbjct: 195 LPSQVEVFVEPLLSANVNGSPMLIKGKAHPFADPVNAVVDLNLDDVDLTDYLKYVPGTPH 254 Query: 223 LFPLAYPIIIDLFGNLFWNEKQP---IYSGVFSVAGDFSKLLNLELSAKKSRLSGNF--- 276 + + + L + +++ + SG + N + K L+ Sbjct: 255 FKVPSAKLDVHLTADFRQEKEKAPALLLSGNIKLKALQLNDQNDKSIVKLPELAITLNEA 314 Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314 K+ I++ + + + S + + + Sbjct: 315 KVLSERFEIAKIAINGVEADISRNANGQLNFENLLTPP 352 >gi|33595528|ref|NP_883171.1| hypothetical protein BPP0843 [Bordetella parapertussis 12822] gi|33565606|emb|CAE40252.1| putative exported protein [Bordetella parapertussis] Length = 839 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 42/373 (11%), Positives = 109/373 (29%), Gaps = 41/373 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82 L D ++ E + + ++G I++ + P + + + + + + Sbjct: 26 FLLTFDPNAYKYKLEEAVQARYERTLNIEGEIELSLFPRIGLAVQGVSLSEPNSPDVFAS 85 Query: 83 IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--------------- 127 I+ + + PLLS + V + I+ G N+ Sbjct: 86 IDSMRLAVAVWPLLSNSLVVDHVTINGFKARVIRGKDGHFNFENLVGGSVQSTDVPGNAA 145 Query: 128 -----------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + + + + +K G I++ D S ++ LN Sbjct: 146 EATAGAITGTAQAIVNGTVSTPKSMQIDIAGLDLKDGEIQLQDAMSGMAVAITKLNAATG 205 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-PLAYP 229 N +S+ + + + + L+++ P A Sbjct: 206 RVTYNQPFDVSLSARVEGGNPRVDAGLTGQAQLTLDPLAKRYAAQRLDLRMEGRLPGAQA 265 Query: 230 IIIDLFGNLFWNEKQPIYS-------GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 + GN+ +N + +KL N+E S +L+ + ++ Sbjct: 266 KSLAARGNVAFNGMTSSLDVAGLEILFQGDIVDTATKLTNVEASVAMPKLAVDPHKTELQ 325 Query: 283 VRISRYKLQSILPNSSTDEDNKT-KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341 + + + +P + ++ N + +G +L+ + Sbjct: 326 IDKLAVRAKGAMPGGPFELAVDAPALNISPTNASGDALSGRVRTQELDASFGLNGISGNA 385 Query: 342 KNDDLKKDDIQYS 354 D+K+ + + Sbjct: 386 GELDIKEAKLDST 398 >gi|33599926|ref|NP_887486.1| hypothetical protein BB0937 [Bordetella bronchiseptica RB50] gi|33567523|emb|CAE31436.1| putative exported protein [Bordetella bronchiseptica RB50] Length = 839 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 42/373 (11%), Positives = 109/373 (29%), Gaps = 41/373 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82 L D ++ E + + ++G I++ + P + + + + + + Sbjct: 26 FLLTFDPNAYKYKLEEAVQARYERTLNIEGEIELSLFPRIGLAVQGVSLSEPNSPDVFAS 85 Query: 83 IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--------------- 127 I+ + + PLLS + V + I+ G N+ Sbjct: 86 IDSMRLAVAVWPLLSNSLVVDHVTINGFKARVIRGKDGHFNFENLVGGSVQSTDVPGNAA 145 Query: 128 -----------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + + + + +K G I++ D S ++ LN Sbjct: 146 EATAGAITGTAQAIVNGTVSTPKSMQIDIAGLDLKDGEIQLQDAMSGMAVAITKLNAATG 205 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-PLAYP 229 N +S+ + + + + L+++ P A Sbjct: 206 RVTYNQPFDVSLSARVEGGNPRLDAGLTGQAQLTLDPLAKRYAAQRLDLRMEGRLPGAQA 265 Query: 230 IIIDLFGNLFWNEKQPIYS-------GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 + GN+ +N + +KL N+E S +L+ + ++ Sbjct: 266 KSLAARGNVAFNGMTSSLDVAGLEILFQGDIVDTATKLTNVEASVAMPKLAVDPHKTELQ 325 Query: 283 VRISRYKLQSILPNSSTDEDNKT-KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341 + + + +P + ++ N + +G +L+ + Sbjct: 326 IDKLAVRAKGAMPGGPFELAVDAPALNISPTNASGDALSGRVRTQELDASFGLNGISGNA 385 Query: 342 KNDDLKKDDIQYS 354 D+K+ + + Sbjct: 386 GELDIKEAKLDST 398 >gi|194292519|ref|YP_002008426.1| hypothetical protein RALTA_B1786 [Cupriavidus taiwanensis LMG 19424] gi|193226423|emb|CAQ72372.1| conserved hypothetical protein, DUF748 [Cupriavidus taiwanensis LMG 19424] Length = 1321 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 40/329 (12%), Positives = 98/329 (29%), Gaps = 45/329 (13%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED 76 L G F P I + E+QAT +G+K+ + G ++ + D+ I +++ Sbjct: 38 LAGYFGGPPLI-----KHLVEKQATEALGRKVTL-GQAQVRPF-ELAATLTDLTIYERDG 90 Query: 77 GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF---------QR 127 + + + + V ++++D+ ++ + G ++ Sbjct: 91 KTPALTLGEVQADTSLASVWHLAPVVDNLHVDRLAVHVVRGADGRMSFADVQEKFAALPP 150 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187 K + I V G ++ D+ D + +L L + + Sbjct: 151 KPADAEPARFSVNNIAVTGSSVRYDDKLLDTTLRVDNLTLTLPFLSNLPHDVEIVT---- 206 Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE-KQPI 246 + + A A ++ L I L L ++ L E K Sbjct: 207 --RPTLSAQVNGTPLALDGEVLPFADSRQTRLNINLDGLEVARMMAFAPTLRDAEVKSGK 264 Query: 247 YSGVFSVA--------------GDFSKLLNLELSAKKSRL-SGNFKISDGNV-------R 284 +VA + + A + + SG + + + Sbjct: 265 LDTRLTVAFRQQQDTQEMVVTGSAALRDAEVRTRAGQPLIRSGKLAVDIARLEPLAHRAQ 324 Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEEN 313 + +++ + ++ D ++ Sbjct: 325 LRSVEIEGLAVEAARRADGSLNLATAFLP 353 >gi|257140987|ref|ZP_05589249.1| hypothetical protein BthaA_17559 [Burkholderia thailandensis E264] Length = 1299 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 86/287 (29%), Gaps = 27/287 (9%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66 G+G L +V+ G F R E+Q + + + + +I P+ + Sbjct: 17 GIGVLIFLVVFGLLG--FFAAPPLIRHVAEQQLSRQLERPATIA---RIAFNPYTLRLEA 71 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125 + + ++ I L +RA + L V ++ +DQP N+ Sbjct: 72 DGVHVGERGGQGDFVDIGKLVVRASWTSLARFAPIVDEVRLDQPRFRIVRYDAQRLNFTD 131 Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + I V GRI D+ + + + L I Sbjct: 132 LVDKFSKPSPQPSAKPVRFSVSNIQVNDGRIDFDDRLLNAKHVVDQWTLGIPFIATLPSK 191 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237 V + D A A+++ S+ ++L L P ++ Sbjct: 192 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKLGGLDVPRLLSYAPTR 245 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 L + + S V + R+SG ++D V Sbjct: 246 LPVDVRSGKLSSNLDV------NFAMAGDTPSLRVSGTVDLNDAQVT 286 >gi|238025466|ref|YP_002909698.1| hypothetical protein bglu_2g21580 [Burkholderia glumae BGR1] gi|237880131|gb|ACR32463.1| Hypothetical protein bglu_2g21580 [Burkholderia glumae BGR1] Length = 1298 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 78/251 (31%), Gaps = 25/251 (9%) Query: 36 FERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLP 94 E+Q + +G+ + +I + P+ + IR+ + G I L +R + Sbjct: 59 AEQQLSRQLGRPARIA---RIALNPYTLRLEADGIRLGEPAGGGPFLDIAKLVVRPAWTS 115 Query: 95 LLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKG 146 LL G V ++ ID P L+ N + I + Sbjct: 116 LLRGAPIVDEVRIDSPRLHLVRYDAQRFNVSDLIETFSKPSPQPSSGPARFSVSNIQINQ 175 Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKI 206 GRI D+ + + L L + V D A Sbjct: 176 GRIDFDDRLLGVRHTVDQLTLGVPFIATLASKADLF------VQPTLRLRLDGSPIAIDG 229 Query: 207 TANFPAKNKAISLKIQLFPLAYPIIID-LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 A+++ + ++ L P ++ + L K S +V+ ++ Sbjct: 230 RTKPFARSRESRINLKFDGLDVPKLLSYVPARLPVEVKSGRLSSDLAVS------FAMDG 283 Query: 266 SAKKSRLSGNF 276 A+ R+SG Sbjct: 284 DARTLRVSGRV 294 Score = 53.0 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 30/301 (9%), Positives = 80/301 (26%), Gaps = 40/301 (13%) Query: 53 GIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112 + +I P ++ + + + + + L + V + +D Sbjct: 526 PLAANIGPS-TLTLSALELGAPYAKGPVIALSKARVGLTRIDLGARRAEVASIDLDGLSA 584 Query: 113 NFYLSSKGVSNWF----------------------QRKSTMDMIHNVILEKIHVKGGRIK 150 G + R + + + +++ G+ Sbjct: 585 EVARLKDGQIDLASLAGPATAREPAPGARGGRAHLDRGAEAAAPWHYRIGALNLTDGQAS 644 Query: 151 IIDQESDQVYFL--SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK--RSAFKI 206 D + + L S L L++ ++ PL + S+ ++ +G+ + Sbjct: 645 FTDFSTPRPVRLAFSPLTLKLGPIGDDLSKPLPL-SLHATLNRKGSVEVAGELRAVPLDA 703 Query: 207 TANFPAKNKAIS-----LKIQLFPLAYPIIIDLFGNLFWNEKQ----PIYSGVFSVAGDF 257 K + L +D G+L ++ Y G ++ Sbjct: 704 RLRIDGKRLDAAAFEPYFGSALNATIASARLDASGDLAVSQGGAATRASYRGDLALLDVR 763 Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317 R + +S+ + + + + +V D + LN Sbjct: 764 LLDKASSDPFAGWR---SLALSNLKADYDSARGTDLDVARVSFANFYGRVLLDAQGRLNL 820 Query: 318 S 318 + Sbjct: 821 N 821 >gi|78222389|ref|YP_384136.1| AsmA [Geobacter metallireducens GS-15] gi|78193644|gb|ABB31411.1| AsmA [Geobacter metallireducens GS-15] Length = 1079 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 93/299 (31%), Gaps = 23/299 (7%) Query: 18 VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK-GGIKIHILPFPSVFFKDIRIDQKED 76 V F + F + +++ + + +++ + G + P+ F + I +++ Sbjct: 24 VAIFFLAHFHELDTYKDQILAEVQKSLNRQVTYEKGEVTFRF--TPAFSFTKVVIKERDG 81 Query: 77 GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN 136 + + + +S R LPLL G++ V + ++P + + G N Sbjct: 82 LTTFATADRVSFRLALLPLLEGKVVVGKLMAERPTIQIIRNRDGTFNISDLLEEKKGAPP 141 Query: 137 VILEKIHVKGGRIKIIDQ---ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193 + + I + G+I DQ + V L L++ + +I + G Sbjct: 142 LRMRGISIHDGKITFTDQAATANGVVTRLEKTALELDRIVRGKETEFTIATTLAQGATTG 201 Query: 194 TGNFDN-------------KRSAFKITANFPAKNKAISLKIQLFP-LAYPIIIDLFGNLF 239 T R K+ A + + P + D+ ++ Sbjct: 202 TLFARGLADLPREGHPMTETRIDAKVEARNLSAAHYWPYYGRFVPFDPLAGLFDVKASIH 261 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---LSGNFKISDGNVRISRYKLQSILP 295 G VAG + + R L+ K V +S + Sbjct: 262 GTAADFTSKGTVHVAGLRFSYPKVFHAVLTPRDLQLNYKLKRDRYQVDVSAVDFRMDGL 320 >gi|254463646|ref|ZP_05077057.1| AsmA [Rhodobacterales bacterium Y4I] gi|206684554|gb|EDZ45036.1| AsmA [Rhodobacterales bacterium Y4I] Length = 635 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 89/311 (28%), Gaps = 39/311 (12%) Query: 36 FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFL 93 Q G+++ + G + P V + + + + E +++ Sbjct: 34 AADQLEAQTGRQLGLGGKVSFTFWPVLGVKADAVTLSNADWAGPEPMLRAERVTIGVAAA 93 Query: 94 PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---------RKSTMDMIHNVILEKIHV 144 LL G +RV ++ PHLN +++G+ NW + + +E + + Sbjct: 94 DLLRGNVRVTEVSAILPHLNLATNAEGIGNWVFGGGGAAAGSTGAGEGTGQPLRIEAVEL 153 Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204 G ++ + + + +L + + G+V A T + Sbjct: 154 TGATLRYA-AHGEAPVEMKNADLSLLWPEPD-----------GTVNARVTLRPAGEPVEI 201 Query: 205 KITANFPAKNKAISLKIQLFPLAYP-IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL 263 A A + +A P G+ N + SG + + + Sbjct: 202 DAEIGTFAAFLAGEVSSVGATVAAPGGRGRFDGHADINGEA---SGRLTFGAEDAARTGA 258 Query: 264 ELSAKKSRLSGNFKI--------SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315 L A + + +DG + + L+ V + + Sbjct: 259 ALGAVLPEVLAQKAVFGADVTYTADGRLSMRDLALELG----KNKLSGAADVEFAKRPRI 314 Query: 316 NFSENGAESMH 326 G Sbjct: 315 TARLQGGALDF 325 >gi|224369836|ref|YP_002604000.1| hypothetical protein HRM2_27440 [Desulfobacterium autotrophicum HRM2] gi|223692553|gb|ACN15836.1| conserved hypothetical protein [Desulfobacterium autotrophicum HRM2] Length = 1200 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 51/397 (12%), Positives = 127/397 (31%), Gaps = 45/397 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61 +R+LI + + LVG F VP+ + + + +++ ++ +I + P+ Sbjct: 10 KRILIPVIIMVLYTLVGFFLVPVL-----GKNILCKSLGKALNRQVTIE---RIAVNPYA 61 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + ++ + + ++ + + L + + V + ++ P ++ + Sbjct: 62 LTATIEEFSVAE-QNKDALFFAKRIFANLSLSSLFTLGLNVSEFSLENPRVSIVRNRDAT 120 Query: 122 SNW--------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 N+ ++ L+ IH+ G K DQ ++ + ++D +L Sbjct: 121 FNFSDLLALGQDNKTDAPEKDEENKGPIRFTLKNIHITQGEFKFEDQFTNVSHAVTDFSL 180 Query: 168 QISARFLNIISPLSIDSIKGSVIA-EGTGNFDNKRSAFKITANFPAKNKA---------- 216 + S + + + + T + + + F + K Sbjct: 181 MLPLLTSREKSRHEAAGMDINFVVNQATVDVHVESTPFAADMATQVEIKISDVDVVHYLS 240 Query: 217 -ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY--SGVFSVAGDFSKLLNLELSAKKSRLS 273 + + + + + +DL +P G + K E K L+ Sbjct: 241 YLPIPETIQLKSLGMNLDLDAAYRSTTPKPSLQIQGKVTAVNAEIKGAAEEEIIKFPSLT 300 Query: 274 GNFKISD---GNVRISRYKLQSILPNSSTDEDNKTK----VSQDEENLLNFSENGAESMH 326 + SD G + I++ +Q+ N S D+ + Q + A++ Sbjct: 301 VDISPSDILAGKLNITKILMQTPQLNLSRDKTGTVNLLTYIPQKQAPPQQAENKVADNKA 360 Query: 327 DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDN 363 D +D F + D S + Sbjct: 361 DKTHSDPFSLNLDNFEIKDATVGFQDLSNEQAFNTTL 397 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 93/341 (27%), Gaps = 45/341 (13%) Query: 42 LIVGKKIAVKGGIKIHILPFPSVFFKD-IRIDQKE----DGSFESKIEGLSMRAEFLPLL 96 +G + + + P PS+ + + E K L++ +L Sbjct: 251 KSLGMNLDLDAAYR-STTPKPSLQIQGKVTAVNAEIKGAAEEEIIKFPSLTVDISPSDIL 309 Query: 97 SGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--------------------RKSTMDMIHN 136 +G++ + + + P LN G N T + Sbjct: 310 AGKLNITKILMQTPQLNLSRDKTGTVNLLTYIPQKQAPPQQAENKVADNKADKTHSDPFS 369 Query: 137 VILEKIHVKGGRIKIIDQESDQVY--FLSDLNLQISARFLNIISPLS-----IDSIKGSV 189 + L+ +K + D ++Q + L +N+ I IK Sbjct: 370 LNLDNFEIKDATVGFQDLSNEQAFNTTLFPINVLIKNVKAGSTISGEYRLTLASEIKEDF 429 Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 G ++ + + NK + L I+ N + Sbjct: 430 ETSGRFQTHPVQAQGSMNLSNLVLNKYLPYYAGL--------INFDVNDGRATLSANFDI 481 Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + + ++ + +S + + V I + ++ + S + N ++ Sbjct: 482 SEKPDKLETTINTVDFMVQSLVIS-DHDAKEQMVEIPEFNIKGASIDLSGKQINTGVITL 540 Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350 + N + E ++E K N + Sbjct: 541 RDANFFIQRDKAGELNLVK---GLLPDKETKKPNTPVLAPQ 578 >gi|209965141|ref|YP_002298056.1| hypothetical protein RC1_1847 [Rhodospirillum centenum SW] gi|209958607|gb|ACI99243.1| conserved hypothetical protein [Rhodospirillum centenum SW] Length = 1041 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 30/235 (12%), Positives = 77/235 (32%), Gaps = 17/235 (7%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK---EDGSFE 80 P +DW FR + +G+ + + G + + +LP P++ D+ + + Sbjct: 22 PALVDWNRFRPELADLLATAMGRDVTIAGDVDLTLLPSPTLLAADVALSEPGAAPGRPPL 81 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILE 140 + + + ++ LPLL+G +++ + + + G + V L+ Sbjct: 82 ASVGTVEVKVRLLPLLAGRVQIEKLALVDSRMRIEFRPDGSR--IGPIDLSALGGTVQLD 139 Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200 ++ + G + + + + L + + +G G+ + D Sbjct: 140 RMTIHRGTLTLEADDGRRRLDLVSI-----------RGSVDAGGPQGPFNVAGSFSLDGV 188 Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255 +T A + ++ L + G + + G G Sbjct: 189 PLTLDVTTGRIAPGATVPVRATLGVPDGKGQVRFAGVVP-DGDPSRLQGDLRAEG 242 >gi|119898485|ref|YP_933698.1| hypothetical protein azo2194 [Azoarcus sp. BH72] gi|119670898|emb|CAL94811.1| conserved hypothetical membrane protein [Azoarcus sp. BH72] Length = 1199 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 100/353 (28%), Gaps = 23/353 (6%) Query: 29 WTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLS 87 R + +G+++AV+G PF + + +RI + + + + + Sbjct: 40 PPVLRHYTVQILHDKLGREVAVEG---ARFNPFTLTAELRGVRIMEADGSAEALAADLVR 96 Query: 88 MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------QRKSTMDMIHNVILEK 141 E ++ + ++ + P + F + G SNW + + L Sbjct: 97 ANLELESVVRRAPVLHELAVVAPRVQFVRRADGGSNWSDVVERLAAEPPSEEPARFSLGN 156 Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201 I + GRI + D + +++L L + P+ +D V +G + Sbjct: 157 ISLSDGRIVVEDAAHGLRHDITELRLGVPFVS---NLPVKVDVF---VEPTLSGRVNGDP 210 Query: 202 SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261 A + ++ ++ L + L + K + SG S + Sbjct: 211 LALSGRTKPFSDDRETVAELTLKNFELSPWL---AYLPFKPKFTVPSGTLSTS-IQLSFS 266 Query: 262 NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL-NFSEN 320 E L G I+ + + Q + + + Sbjct: 267 QPEGQQPLIALQGQIDIAG--LAVQEVGGQPVFAVEELGLELGDVQPLAGKWHFSRLRVI 324 Query: 321 GAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENF 373 E T ++ D + ++ +F Sbjct: 325 KPEVDLVRLTTGGLNVTALLPESAASAPADKTAKKGARPAAAEGSTAGSEVDF 377 >gi|329114605|ref|ZP_08243364.1| Hypothetical protein APO_1401 [Acetobacter pomorum DM001] gi|326696085|gb|EGE47767.1| Hypothetical protein APO_1401 [Acetobacter pomorum DM001] Length = 717 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 79/248 (31%), Gaps = 8/248 (3%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KEDGSFE 80 V D + G+ + + G + + ILPFP V K +++ EDG Sbjct: 23 IVSATQDADWLKTRLADAVESSTGRHLTI-GQLHVWILPFPWVEAKGVKLSSVAEDGVNM 81 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILE 140 I + R LPL S I D+ + P + + G ++W Sbjct: 82 LDIGQVRARLALLPLFSHRIAFEDVSLISPQVQLRRLADGRADWHFTPQERQSSGGGASS 141 Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV-IAEGTGNFDN 199 + + D Q ++ L+ ++ + + G+ + Sbjct: 142 SSGKMHWNLTVSDLSLTQA-QVAWLDAVHHRSGAFQVAEGKVKGLSGNAPDFDVKLRKGA 200 Query: 200 KRSAFKITANFPA---KNKAISLKIQLFPLAYPI-IIDLFGNLFWNEKQPIYSGVFSVAG 255 + A + L+I L +P + + G++ Q +Y+ + Sbjct: 201 GQLALTGQTGPLLPMSAQLPMQLRISLTVNGHPAGLAHIDGSITDPRGQKVYALQIGGSV 260 Query: 256 DFSKLLNL 263 + LN+ Sbjct: 261 AQLRDLNV 268 >gi|332878647|ref|ZP_08446366.1| hypothetical protein HMPREF9074_02109 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683422|gb|EGJ56300.1| hypothetical protein HMPREF9074_02109 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 895 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 38/359 (10%), Positives = 100/359 (27%), Gaps = 21/359 (5%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58 +++++ G V+L +P F +E + +++ + I + Sbjct: 3 IVKKIFKWGGITLVVLLGAMVAIPYFF-KDTIKEKVIEMVNKNLKANLSLA-DVDISLFK 60 Query: 59 -LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 P + D + KE G + + + L++G + + + Sbjct: 61 SFPKAQITLSDFALVNKEPFVGDTLFAAKHIDVTLSVKDLMAGNYNLLGANVKDASAYIH 120 Query: 116 LSSKGVSNWF-----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + +G N+ + ++ +V+ + + + ++D+ Sbjct: 121 FNKEGAGNFDIAIPSDTPEEESAPIKLDIQSYNVENLKFTFKMDDGNIFMEIADIYHSGK 180 Query: 171 ARFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 F + L + + + + + + KN+ + K + Sbjct: 181 GNFAEEVLDLDTQTKANFTFAMDKSTFMNRVPITLQALLGIDLKNQKYTFK-ENKATVNR 239 Query: 230 IIIDLFGNLFWNEKQPIYSGVFS----VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 + + G + E+ Y FS +F L+ E S + ++ Sbjct: 240 LDLVFNGFIQLLEEGQRYDLTFSTPTNTFQNFLALIPEEYSKSIENVKTTGNLTLKGFAK 299 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344 I + V + + +N + K N N Sbjct: 300 GDMVGDKIPTFGLEMFADNATVKYPDLPK---TIKDISIDLKVNNATGITNDTKVNLNK 355 >gi|162148057|ref|YP_001602518.1| hypothetical protein GDI_2273 [Gluconacetobacter diazotrophicus PAl 5] gi|161786634|emb|CAP56216.1| conserved protein [Gluconacetobacter diazotrophicus PAl 5] Length = 827 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 78/260 (30%), Gaps = 22/260 (8%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG- 77 ID R+ G+ + V G + + ILP+PSV +D+ + G Sbjct: 38 ATMAARAMIDPASLRQQAVAAVWRQTGRVLRV-GTLDVRILPYPSVSVRDLALSDMAGGA 96 Query: 78 -SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI-- 134 GL R LPLL EIR+ D+ + P L + G +NW Sbjct: 97 RPDMLTATGLDARLAILPLLHHEIRLEDVRLTHPDLLVERMADGRANWQMHPQPDTAPAA 156 Query: 135 -----------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 V + + V+ + D+++ ++ + + L +P Sbjct: 157 SNPGGSSHSARWAVRIGSVRVRDAVVTWDDRQAHGTGTVALDRVALDG--LTGSAPSFDV 214 Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP-IIIDLFGNLFWNE 242 A + ++ P K + ++ P + L G L Sbjct: 215 QGHRPADAGAGFTMQGQVGPLVTPSSDPWK---VRVQAAFLLDGQPGGSLGLDGALSDPA 271 Query: 243 KQPIYSGVFSVAGDFSKLLN 262 Y LN Sbjct: 272 HLRGYDVTLHATAGQVSGLN 291 >gi|325983439|ref|YP_004295841.1| hypothetical protein NAL212_2894 [Nitrosomonas sp. AL212] gi|325532958|gb|ADZ27679.1| protein of unknown function DUF748 [Nitrosomonas sp. AL212] Length = 1088 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 40/355 (11%), Positives = 105/355 (29%), Gaps = 35/355 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-F 61 +R+ I LG + V+++ A + F + E + + + + + V I I P Sbjct: 13 KRLGISLGVIAIVIILLA-AISYFWLPGYAKSQLEIRLSEFLQRPVTVA---SIEIKPHT 68 Query: 62 PSVFFKDIRID----QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 + ++ E G L + L + + + P Sbjct: 69 LELLVHGFQVGVKADSNEPGESLFSFNRLYIDLSIKSLKQRAPVITAIALTHPKFRLIRE 128 Query: 118 SKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 +K N D + I ++ G + ID+ + ++++NL I Sbjct: 129 TKDQLNISDLLEKFSQPSDEKDDDGAQFSISNITIQEGHFEFIDRHMQTDHQITEINLGI 188 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 + +++ + + + A + + +L ++ + Sbjct: 189 P------VIANFDSALEHWIEPHFSARINGSPFALEGKLRPFTVPQEATLALKFNKIDLS 242 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 + + + SG + + A L+G N + + Sbjct: 243 ---EFDRYAPLPQGIRLLSGFLD-SDLLVTFTQEQEQAPNIMLTG-------NTILHQLA 291 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344 ++ + N +++ + E ++ +N+ + E E + Sbjct: 292 IKDTTVAAPYR-TNVKELNIALTQVDLMREKPSQIKLKMNQVELTRESESEPALS 345 >gi|90411511|ref|ZP_01219522.1| hypothetical protein P3TCK_12801 [Photobacterium profundum 3TCK] gi|90327724|gb|EAS44067.1| hypothetical protein P3TCK_12801 [Photobacterium profundum 3TCK] Length = 1317 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 107/327 (32%), Gaps = 14/327 (4%) Query: 2 LRRVLIGLGFLF---SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58 L+++ +++ G + + +D R + T + + + G I++ I Sbjct: 19 LKKIAKWASIGLLSPVILITGVLSYGVNLDLAPHRTYINQWLTNNLHRDAEIAGDIELEI 78 Query: 59 LPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 P++ + + I E L + LPLL+ + + + + LN Sbjct: 79 SFSPAIRLEGVMIGNIEAIPWQPMLTSGYLEAKISVLPLLNNTLEIDHLEFENIALNLAK 138 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 ++ G++NW + + + N E + + SD ++ L + N Sbjct: 139 TADGLTNWAFNEQPLPVNLNTNDENQDPSNSGLPFSLRLSD-SISAKNITLAYEDQTQNQ 197 Query: 177 ISPLSIDSIK----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 L ++++ + + G+ + + + ++ + Sbjct: 198 YIGLFLENLNLTKPDTWQLDVKGHTMGQNYDLTLEGDLETLINEQQGLLKAKGEFAGAQL 257 Query: 233 DLFGN---LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-RLSGNFKISDGNVRISRY 288 ++ N L E + LL L++ ++ + S + I+ Sbjct: 258 NIDANIVPLQQGESHATVQLDWQDTRPIEDLLGLDVKPIAPLSVNADVTASMNHFAITDL 317 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLL 315 L S + + + D K V + + Sbjct: 318 TLTSPITQAKGNLDVKLDVPYTDGHNF 344 >gi|167578991|ref|ZP_02371865.1| hypothetical protein BthaT_12675 [Burkholderia thailandensis TXDOH] Length = 862 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 85/286 (29%), Gaps = 25/286 (8%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66 G+G L +V+ G F R E+Q + + + + +I P+ + Sbjct: 17 GIGVLIFLVVFGLLG--FFAAPPLIRHVAEQQLSRQLERPATIA---RIAFNPYTLRLEA 71 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125 + + ++ I L +RA + L V ++ +DQP N+ Sbjct: 72 DGVHVGERGGQGDFVDIGKLVVRASWTSLARFAPIVDEVRLDQPRFRIVRYDAQRFNFTD 131 Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + I V GRI D+ + + + L I Sbjct: 132 LVDKFSKPSPQPSAKPVRFSVSNIQVNDGRIDFDDRLLNAKHVVDQWTLGIPFIATLPSK 191 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 V + D A A+++ S+ ++L L P ++ Sbjct: 192 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKLDGLDVPRLLS---YA 242 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + SG S + R+SG ++D V Sbjct: 243 PTKLPVDVRSGKLS-SNLDVNFAMA-GDTPSLRVSGTVDLNDAQVT 286 Score = 37.2 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 39/331 (11%), Positives = 92/331 (27%), Gaps = 59/331 (17%) Query: 39 QATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG 98 + + + A+ G + +V D ++ +E+ + + A L L Sbjct: 254 KLSSNLDVNFAMAGD-TPSLRVSGTVDLNDAQVTSREN-EPLFAAHAVHVAAAQLEPLRN 311 Query: 99 EIRVFDMYIDQPHLNFYLSSKGVSNWF--------------------------------- 125 + D+ IDQP ++ GV N Sbjct: 312 VLHFDDIRIDQPVVSLARDKAGVLNVTKLAGGANGAPAATKAAAAKAAGASAGGLAGAAS 371 Query: 126 --------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 ++ +++ + G + + D +S ++ Sbjct: 372 GASSAAAANADKEKAQPLDLTIKRFAINDGTLNLNDASLATPAAIS---------LTHVA 422 Query: 178 SPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 + L+ ++ G A T D + K F + K+ + LA P+ + Sbjct: 423 TTLADFTLAGKTPARYTLATDVASGGSLKAEGAFSLAARQADTKLVVDALALPV---VQP 479 Query: 237 NLFWNEKQPIYSGVFSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 L + G S + + L A+ S + + + K +++ Sbjct: 480 YLAGATSARVLDGALSTSVNAKADWSKTPLDAQVS--DSELGLKSLKIALPNAKTPAVVL 537 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + + K ++ + + G Sbjct: 538 PDARVKVTKIDLAARTAEIASVDATGLALDV 568 >gi|332188398|ref|ZP_08390122.1| asmA family protein [Sphingomonas sp. S17] gi|332011544|gb|EGI53625.1| asmA family protein [Sphingomonas sp. S17] Length = 705 Score = 97.3 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 44/336 (13%), Positives = 95/336 (28%), Gaps = 29/336 (8%) Query: 11 FLFSVVLVGAFTVPLFIDWTDF-REDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68 + ++++ A + LF+ F R FE + + + V G +++ P+ + Sbjct: 28 GVGLLLVIAAIWLVLFVTKGRFLRHPFESVVGKLTHRTVTVGGDFQLYFAPWRIKFVAER 87 Query: 69 IRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126 I I + + + R L LL G+ R + + ++ + +N + Sbjct: 88 IAISNPDWASRPNLFTADRIDSRIAPLSLLFGKRRFTWLELTNGAVDLEWTPDHRTNSWT 147 Query: 127 RKSTMD--MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 + ++ +V G I+ D ++++A Sbjct: 148 FSQKKGGKPLEFPRIDTANVTGTTIRYRDPR-----------MRVTADLALDDIRSQDAR 196 Query: 185 IKGSVIAEGTGNFDNKRSAFKIT-ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243 I +V G G + + A ++ A +ID+ G L Sbjct: 197 IGQAVGVRGKGVIRSTPFKLTAQLLSPDATANRGKNELIARMRAAGNVIDVAGTLPSIAD 256 Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYKLQSILPNSS 298 G L + R L R +R + Sbjct: 257 IENVPLRTRARGKDMSTLLDIIGVVIPRTRTYDLRAQMVKDGEAYRFTRMAGTFGDSD-- 314 Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334 + V+ + L+ D+ + F Sbjct: 315 --LAGRLTVTNGQ--RLHLDSALTTKKLDIIDAAPF 346 >gi|209542673|ref|YP_002274902.1| AsmA family protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530350|gb|ACI50287.1| AsmA family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 818 Score = 97.3 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 78/260 (30%), Gaps = 22/260 (8%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG- 77 ID R+ G+ + V G + + ILP+PSV +D+ + G Sbjct: 29 ATMAARAMIDPASLRQQAVAAVWRQTGRVLRV-GALDVRILPYPSVSVRDLALSDMAGGA 87 Query: 78 -SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI-- 134 GL R LPLL EIR+ D+ + P L + G +NW Sbjct: 88 RPDMLTATGLDARLAILPLLHHEIRLEDVRLTHPDLLVERMADGRANWQMHPQPDTAPAA 147 Query: 135 -----------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 V + + V+ + D+++ ++ + + L +P Sbjct: 148 SNPGGSSHSARWAVRIGSVRVRDAVVTWDDRQAHGTGTVALDRVALDG--LTGSAPSFDV 205 Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP-IIIDLFGNLFWNE 242 A + ++ P K + ++ P + L G L Sbjct: 206 QGHRPADAGAGFTMQGQVGPLVTPSSDPWK---VRVQAAFLLDGQPGGSLGLDGALSDPA 262 Query: 243 KQPIYSGVFSVAGDFSKLLN 262 Y LN Sbjct: 263 HLRGYDVTLHATAGQVSGLN 282 >gi|149369724|ref|ZP_01889576.1| outer membrane assembly protein [unidentified eubacterium SCB49] gi|149357151|gb|EDM45706.1| outer membrane assembly protein [unidentified eubacterium SCB49] Length = 875 Score = 97.3 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 49/383 (12%), Positives = 115/383 (30%), Gaps = 37/383 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI 58 +++ L LG V+++ P F++ E+ + + + + + Sbjct: 1 MKKFLKILGIFLIVLVIALIAAPFL-----FKDSIEKIVKQTINDNVNATVAWESLDLSL 55 Query: 59 ---LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE---IRVFDMYIDQP 110 P ++ + + G + + + + L + I++ ++Y++ Sbjct: 56 IKSFPDAALTINNFSVINNAPFKGDTLASGKQVKLDMGITQLFKTQEEAIKINELYLEDS 115 Query: 111 HLNFYLSSKGVSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159 +N + + +N+ + + L+ +K RI +D+ ++ Sbjct: 116 FINIKVDANNNANYDIAIQDETNTAPETSQETEGGFTFDLQGYELKNARINYLDESTETY 175 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218 LSD N F L ++ + +N + +N+ + Sbjct: 176 LMLSDFNHSGKGDFSASTLELDTNTDALVTYKMGDVAYLNNTKLTLDAVILMDLENQKYT 235 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFK 277 K + + + L G + NE + + DF L + A + L G Sbjct: 236 FK-ENEAKINQLPLALDGFIKINENNTELDITLNTPSSDFKNFLAVIPEAYVNNLDGVTT 294 Query: 278 ISDGNVR---ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-LNETDF 333 + V I N + + D LN+T Sbjct: 295 TGNFTVNGAIKGIVDDTYIPKFDIKIRSNNASFKYADLPK---TVENITINTDLLNQTGL 351 Query: 334 FEEEEKKNKNDDLKKDDIQYSVN 356 ++ K DD ++ N Sbjct: 352 VKDTYVMLNGVSFKIDDELFTAN 374 >gi|254281724|ref|ZP_04956692.1| AsmA family protein [gamma proteobacterium NOR51-B] gi|219677927|gb|EED34276.1| AsmA family protein [gamma proteobacterium NOR51-B] Length = 664 Score = 97.3 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 106/360 (29%), Gaps = 22/360 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + +L +G L ++V+V F +P+FID + + G ++ V G + P Sbjct: 1 MLVILWIVGALIALVVVALFLLPVFIDTNELVALADEMVGEATGGELRVLGEADFSVFPR 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIE----GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 S+ + + ES+IE L LPLL+G V M + ++ Sbjct: 61 LSLNLGEATLTIPPADDTESRIEAKITQLDFGLAILPLLTGRTEVDAMNLSGVNVTIT-- 118 Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 L + + + + ++ + S + + Sbjct: 119 -----EAVATPEIPVPDDLEDLSDREWEQLGRALRKEREAKRKEMTGATVVSSGLVVAVD 173 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKIT-ANFPAKNKAISLKIQLF-PLAYPIIIDLF 235 + + D + + G + FK++ N + I + +L P A PI + + Sbjct: 174 AVVLEDVSLTLLDSSGKETLNVAIPLFKVSDVNTEERPITIDGRARLQSPDATPINLSID 233 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 G++ V ++L + S LSG + + Sbjct: 234 GDVRVASNLTDIK----VIAVNTRLTGVLSGPIDSTLSGAVTLLPLHADFDLTTALPGGS 289 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV 355 + E + S D K + + D S Sbjct: 290 -----VSGDLTFAALESPQILVSFESESLNLDQLTPPASSASGKATPVTETEADSSSESA 344 >gi|71280785|ref|YP_268604.1| hypothetical protein CPS_1874 [Colwellia psychrerythraea 34H] gi|71146525|gb|AAZ26998.1| conserved hypothetical protein [Colwellia psychrerythraea 34H] Length = 1011 Score = 97.3 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 65/400 (16%), Positives = 138/400 (34%), Gaps = 44/400 (11%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ ++ +F + G F +PL + + T + ++ + I PF Sbjct: 14 IKAIIYSGIVVFLYAISGFFILPLIV-----KPLIIDTVTEKLERQAQLD---VIEFNPF 65 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 S+ K I K + L++ + PLL I ++ I++P ++ + + G Sbjct: 66 TLSITLKGFSISGKH-TDKLLDFDLLTVNLQAFPLLQKTISFDEIIINKPEVSVIILANG 124 Query: 121 VSNWF-------------QRKSTMDMIHNVILEKIHVKGGRIKIID--QESDQVYFLSDL 165 N+ ++T + + ++K G I D +E+ + + ++ Sbjct: 125 EFNFQDIILKNTALDSEVDSENTNEAAWILSIDKFRHNEGIINFSDQNRETAYHHTIKEI 184 Query: 166 -----NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAIS 218 N A N+ + S + G + +S+ I+ P K + + Sbjct: 185 NVALDNFSTKAGDNNMHLVKAKTSQGTELNWHGKFSLSPLKSSGDISFVSPLKIVSDYLQ 244 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278 +I + ++ + + +QP + +A + + KK S + Sbjct: 245 QRILFNITEGSLKVNSHYDFNFAGEQPQFIINNLMASISALEIRSRDDNKKIITSDELSV 304 Query: 279 SDGNVRIS--RYKLQSILPNSSTDEDNKTKVS-QDEENLLNFSENGAESMHDLNET---- 331 + S + + SI S N+ K+S D E L + D E Sbjct: 305 DLEQLSSSDKKIVINSISNTGSFIAVNRNKLSQFDIEKLFILQQLNQSVSTDETEVSTES 364 Query: 332 -----DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHD 366 + + ++ K +N DL+ I S N D+S Sbjct: 365 STEKDEAVKHKDNKRENWDLEIKAISTSNNNIVINDSSVS 404 >gi|58040099|ref|YP_192063.1| hypothetical protein GOX1666 [Gluconobacter oxydans 621H] gi|58002513|gb|AAW61407.1| Hypothetical protein GOX1666 [Gluconobacter oxydans 621H] Length = 839 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 99/335 (29%), Gaps = 42/335 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ L + ++ + + ID RE G + V+ + +LP+ Sbjct: 1 MKKLTGVLIAVIVAIVGVSVATHVLIDQDALRERVAVALKHQTGLMMQVR-HSSVQLLPW 59 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+ D+ + ++ + K + LL E+R D ++ +N G Sbjct: 60 PAFEASDVVLT-RDGQTPVLKAHTIHAGIAVFALLHREVRFQDFVVEGATVNLVRGLDGQ 118 Query: 122 SNWFQRKSTMDMI----------------HNVILEKIHVKGGRIKIIDQESDQV------ 159 +NW + ++ L+ +HV + D+ + Sbjct: 119 ANWSLTPDRENEDASLPVHGQSGQRIQAHWDLSLDGLHVAQAAVIWNDRLTRTSGSFGLD 178 Query: 160 -------------YFLSDLNLQISARFLNIISPLSIDSIKGSVIAE-GTGNFDNKR---S 202 L + + LS GT D ++ Sbjct: 179 TLDLAGLRSSSPWISLQGHHAGTPFTLKGHVGNLSQIRGTQPWAFSIGTTLGDGEKRDWL 238 Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262 P++ + + L Q LF + P G +V G L + Sbjct: 239 NLDGRIGNPSQMQNVVLTAQGEWPNLQDAHRLFPHANLPN-VPALGGDIAVQGSPGPLTD 297 Query: 263 LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297 L+ A ++ G+ ++ L+ + + Sbjct: 298 LDGDALLHQVLGSMNPMRVHLHAGYVALRQGVLRN 332 >gi|163857981|ref|YP_001632279.1| hypothetical protein Bpet3668 [Bordetella petrii DSM 12804] gi|163261709|emb|CAP44011.1| conserved hypothetical protein [Bordetella petrii] Length = 1181 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 40/298 (13%), Positives = 90/298 (30%), Gaps = 30/298 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR L +V+L+ + R ++G+ + V G I + Sbjct: 12 RRFGKILLATVAVILILFGVAAWQV-PKVLRSALTDDVAGLLGRPVRV-GDISFNPF-TL 68 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 +V D+ I+Q S I L + A ++ L V + +++P + Sbjct: 69 TVRAHDLAIEQPGADSPLVDIGQLDVSASWMSLFWFAPVVDSVRVERPRIALVREDVTRF 128 Query: 123 NWF---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 N+ + + L + ++ G I + D+ + + + ++ L Sbjct: 129 NFSDIQQKLADMAAAQPEPAQPDDGGLPRFSLNNLVLEDGAITLDDRVTGRKQQVDEIAL 188 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 + + V + A + A +L ++ LA Sbjct: 189 GVPFISTFGYAT------DIDVQPSVHMRINGSPFDLDGVARPFDEVPASTLNVKFTGLA 242 Query: 228 YPIIIDLFGN-LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 D + L ++ + V +A R+ G+ + ++R Sbjct: 243 LENWADAWPMPLPIKVERALLDSDLRVV-----FEQPRDAAPTIRVVGDLGLRQLDLR 295 >gi|329119470|ref|ZP_08248155.1| hypothetical protein HMPREF9123_1584 [Neisseria bacilliformis ATCC BAA-1200] gi|327464403|gb|EGF10703.1| hypothetical protein HMPREF9123_1584 [Neisseria bacilliformis ATCC BAA-1200] Length = 728 Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 44/380 (11%), Positives = 110/380 (28%), Gaps = 32/380 (8%) Query: 2 LRRV------LIGLGFLFSVVLVGA----FTVPLFIDWTDFREDFERQATLIVGKKIAVK 51 ++R+ L L + G + R+ + G+K+ Sbjct: 1 MKRLQSGKFWLKSLTAAVLLFAAGFAAQHLLLAWLFSPEKLRQAADAAV-AGTGRKVRFV 59 Query: 52 GGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111 + + P P+V K + I + + E + E + + + L GE R+ + +P Sbjct: 60 DEGRTTVFPRPTVTLKQVEITRAHGEAAEIRAEEMRLGIGWGS-LWGEPRIEKWVLLRPE 118 Query: 112 LNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 L+ + G N + +++I V+ GR+ + E + + L +++L ++ Sbjct: 119 LSLSRDAAGKWNVADLLAKESR---FAVDRIIVEDGRLLLDTPE--RRHTLENVSLNVNN 173 Query: 172 RFLNIISPLSIDSIKGSV-----IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 + +K + + G + +++ ++++ Sbjct: 174 ADDAQTQIKAAGRLKTPLWENDAEWKLQGTLNRNAQGWRMP--------ELAIEGGSKWR 225 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 + W + + L+A+ L + + Sbjct: 226 GAAFSFRFAADAAWRRDSGKARFSKAALKLDIPDYEMHLNAESPALEADGDSLTAAAANA 285 Query: 287 RYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 + D K V D + G+ D T F + + Sbjct: 286 VLTAKYGGAAWDGTLDAKNIGVWPDRASAEQIGLKGSRKT-DATHTAFTLDTPLAWRKGG 344 Query: 346 LKKDDIQYSVNKKEEKDNSH 365 + + + + N Sbjct: 345 WEMPAAKLTTRMENAAGNPR 364 >gi|258542796|ref|YP_003188229.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter pasteurianus IFO 3283-01] gi|256633874|dbj|BAH99849.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter pasteurianus IFO 3283-01] gi|256636933|dbj|BAI02902.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter pasteurianus IFO 3283-03] gi|256639986|dbj|BAI05948.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter pasteurianus IFO 3283-07] gi|256643042|dbj|BAI08997.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter pasteurianus IFO 3283-22] gi|256646097|dbj|BAI12045.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter pasteurianus IFO 3283-26] gi|256649150|dbj|BAI15091.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter pasteurianus IFO 3283-32] gi|256652137|dbj|BAI18071.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655194|dbj|BAI21121.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter pasteurianus IFO 3283-12] Length = 718 Score = 96.9 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 35/257 (13%), Positives = 79/257 (30%), Gaps = 25/257 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KEDGSFE 80 + D + G+ +++ G + + ILPFP V KD+++ EDG Sbjct: 23 IISATQDADWLKTRLADAVESSTGRHLSI-GQLHVWILPFPWVEAKDVKLSSVAEDGVNM 81 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI------ 134 I + R LPL S I D+ + P + + G ++W Sbjct: 82 LDIGQVRARLALLPLFSHRIAFEDVSLISPQVQLRRLADGRADWHFTPQERQSSIGGSSS 141 Query: 135 -------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI-ISPLSIDSIK 186 N+ + + + ++ D + ++ N + + Sbjct: 142 ASSGKMHWNLTVSDLSLTQAQVAWDDAVHHRSGAFQVAEGKVKGLSGNAPDFDVKLRKGA 201 Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 G + G + + + + + + G++ + Q + Sbjct: 202 GQLALTGQT---GPLLPMSAQLP-----MQLRISLTVNGHPAGL-AHIDGSITDPQGQKV 252 Query: 247 YSGVFSVAGDFSKLLNL 263 Y+ + + LN+ Sbjct: 253 YALQIGGSVAQLRDLNV 269 >gi|332883872|gb|EGK04152.1| hypothetical protein HMPREF9456_01180 [Dysgonomonas mossii DSM 22836] Length = 884 Score = 96.9 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 46/366 (12%), Positives = 112/366 (30%), Gaps = 30/366 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-- 59 +++ L G + V++V +P + A + + +K +++ Sbjct: 1 MKKALTIAGVVIVVLIVAMIAIPFLF-KDKIKTAVLNAANEKLNATVDIK-DFGLNLFSN 58 Query: 60 -PFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 P ++ D + D + S+ + + L E + + +D+ + + Sbjct: 59 FPNATLSLNDASVVGVGDFQKDTLLSAKSASVTIDLMSLFGSEYNISKINLDKASVYTKV 118 Query: 117 SSKGVSNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 G +NW + + + L+KI V + + L+ N Sbjct: 119 LEDGRANWDIMKADSTASASTESESAFKLNLKKITVNDCSFVYQNDSTKMKVTLNKWNGD 178 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 + F + L+ +S G V T D N ++ L + + Sbjct: 179 LHGDFSAGETTLNTNSTIGEV----TFVMDGIPY-----LNKIQGVADATINANLDKMEF 229 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRIS 286 NL N+ + G F++ G + + +L+L+A ++ + + + Sbjct: 230 AFK---ESNLQLNDLKASIDGTFAMVGKDYEDMEFDLKLNAPDTQFKDILSLVPA-MYTA 285 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346 +K + + K + D + ++M + Sbjct: 286 DFKDVKTSGTAKLEAYIKGLMHGDSYPAFDVKIIVNDAMFQYPSLPKAVNNINVAMAINS 345 Query: 347 KKDDIQ 352 K + Sbjct: 346 KGGSLD 351 >gi|322420237|ref|YP_004199460.1| OmpA/MotB domain-containing protein [Geobacter sp. M18] gi|320126624|gb|ADW14184.1| OmpA/MotB domain protein [Geobacter sp. M18] Length = 1153 Score = 96.9 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 30/311 (9%), Positives = 88/311 (28%), Gaps = 18/311 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R + + +F ++ F+ + ++ +++ + G + I+ + Sbjct: 1 MKR-WMWVSLIFVGSVLCLAGFVAFLLPEILKSQVMQRVEAATSRRLEI-GELSINPFTW 58 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + +D+R + + + + V ++ P L + Sbjct: 59 -TFEIRDLRFSELRSRETFLTFSSARIAMSPMSVFRRAPIVASAHLASPRLRIVRTGANS 117 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLNLQIS-----ARFL 174 N+ + + + + + G + ID+ ++ + L + L + Sbjct: 118 YNFSDLLKWLPKHPRLSVNNLTIGNGSLDFIDRGLAVEKHHELRKIELAVPFVTTIPYLA 177 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID- 233 + ++ G A + T K A+ + P P+ Sbjct: 178 KRYVAPRLSALVNGSPVYLEGKLRPFPRAVEATVTLDLKEVALPYYLAYLPRELPVRAAS 237 Query: 234 -------LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 L ++ P + + KL + + I Sbjct: 238 GRLSARVALSYLAAQKRNPELALSGNATLADLKLADRTGAPFLEARRLGAVIDRARPLTG 297 Query: 287 RYKLQSILPNS 297 + L S+ ++ Sbjct: 298 EFDLSSLSADA 308 >gi|54301946|ref|YP_131939.1| hypothetical protein PBPRB0266 [Photobacterium profundum SS9] gi|46915366|emb|CAG22139.1| hypothetical protein PBPRB0266 [Photobacterium profundum SS9] Length = 999 Score = 96.9 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 106/342 (30%), Gaps = 18/342 (5%) Query: 2 LRRVLIGLGFLF---SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58 L+++ F +++ G + +D R + T + + + G I++ I Sbjct: 19 LKKIAKWASIGFLSPVILITGVLRYGVNLDLAPHRAYINQWLTDNLHRDAEITGDIELEI 78 Query: 59 LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 P++ + + I ED L + LPLL+ + + + D LN Sbjct: 79 SFSPAIRLEGVMIGNIEDIPWQPMLTSGYLEAQISVLPLLNNTLEIDHLEFDNIALNLAK 138 Query: 117 SSKGVSNWFQ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 ++ G++NW + NV + + + SD ++ + Sbjct: 139 TADGLTNWEFNKQPSPSSTSSLNVNDKSQAPSNSGLPFSLRLSD-SISAKNITFAYEDQS 197 Query: 174 LNIISPLSIDSIK----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 N L ++++ + + G+ + + + ++ Sbjct: 198 QNQYIGLFLENLNLTKPDTWQLDVKGHTMGQDYDLTLNGDLENLINEQQGSLKAKGEFAG 257 Query: 230 IIIDLFGN---LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-RLSGNFKISDGNVRI 285 +++ N L E + LL L++ ++ + S + I Sbjct: 258 AQLNIDANIVPLQQGESHATVQLDWQDTRPIEDLLGLDVKPIAPLSVNADITASMNHFSI 317 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLL-NFSENGAESMH 326 + L S + + D K V + + + Sbjct: 318 TDLALTSPITQAKGYLDVKLDVPYTDGHNFIEGQLDVPLIDL 359 >gi|330891674|gb|EGH24335.1| AsmA family protein [Pseudomonas syringae pv. mori str. 301020] Length = 686 Score = 96.5 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 39/379 (10%), Positives = 98/379 (25%), Gaps = 73/379 (19%) Query: 53 GIKIHILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111 I + P+ + D + + ++ L + LPLL ++++ D+ ++ + Sbjct: 1 DIGWSLFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLN 60 Query: 112 LNFYLSSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGG 147 L + G NW + + ++ + V Sbjct: 61 LTLHRYENGHGNWEDIGKPAVASTETSGETTPAPAPDAPKADRPSQPIRLDIDSLTVNNA 120 Query: 148 RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDN 199 R+ D + + + L P+ + + ++ G D Sbjct: 121 RVDYSDARKGRTFMAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDR 180 Query: 200 KRSAFKI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ------------ 244 ++ + + K F +++DL N+ Sbjct: 181 VLKRYQFEDMRLSGEVAGGPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGE 240 Query: 245 ---------PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRI 285 P SG S+A + + +S + ++ + Sbjct: 241 LRARDLDKTPQISGGLSIAQLDLRTFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLAL 300 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKN 343 L+ + + V + L G D EE + K + Sbjct: 301 ENLNLKV----DDSTFAGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARK 356 Query: 344 DDLKKDDIQYSVNKKEEKD 362 +++ + + + Sbjct: 357 SEVQSGEAAAAAGDSPLPE 375 >gi|109899851|ref|YP_663106.1| hypothetical protein Patl_3550 [Pseudoalteromonas atlantica T6c] gi|109702132|gb|ABG42052.1| protein of unknown function DUF748 [Pseudoalteromonas atlantica T6c] Length = 1074 Score = 96.5 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 49/403 (12%), Positives = 121/403 (30%), Gaps = 47/403 (11%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFK 67 + + + + I + + G+ + ++ KI I PF V Sbjct: 19 IATYLVIAYLLYALILGVITPLVLQSQLPSVLSEKTGRDVNIE---KIRINPFLLRVRVT 75 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNFYLSSKG---VSN 123 +I+I+++ ++ L + A F L V ++I++P+ + ++ G N Sbjct: 76 NIQINEQASNEPFVRVALLELDAGFWQSLLHLTPAVEHVFIEKPYAHVARTAGGDNTRFN 135 Query: 124 W--------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 + Q I ++ L + G + + D+ + +L ++ Sbjct: 136 FTGMIEALSQNGDKQPQEDEATSEIPHIRLGLFRLSNGHVMLSDKVTGTQINYPELGFEL 195 Query: 170 SARFLNIISPLS-----------------IDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212 + + + G+V +G KI A Sbjct: 196 TDLDTLASITVPATKRDALLPENHYAFTLLTDEGGAVHLDGQFQLSPVDVKGKIELESIA 255 Query: 213 KNKAISL-KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR 271 L + ++DL N + + A L + + + + Sbjct: 256 LPPLWPLSNALMAAKLTSGLLDLNLNYAVTQGDSDMHLQVNRAQLRVSDLTMSDATSQPK 315 Query: 272 LS-GNFKISDGNVR--ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328 ++ I+D + + + SI + + + ++ +L+ Sbjct: 316 INIAGIHINDFELDTATQQIDINSIRIDEPWF---EASLDKNGVDLVAL-LTPKSETSSA 371 Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371 + +F E + K + + + + E N E+Q Sbjct: 372 SNAEFNTESIAEPKTKPQSEPEPEAKTAQGTEPQNESRTESQA 414 Score = 41.0 bits (94), Expect = 0.30, Method: Composition-based stats. Identities = 37/323 (11%), Positives = 76/323 (23%), Gaps = 19/323 (5%) Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 + + K + + + + + D+P + +N Sbjct: 562 VSALVVTDGPKQEPLLKWQDMQVAGIQYDSQKRAFSLQKIAFDKPFAKLVIDKDKNTNIS 621 Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 + SDQ L + S Sbjct: 622 DLVVQQAANDGITEHAPATDDSSDTAHQ--SDQQTSLETAPAMAINIGEIRLLGGSAYFE 679 Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 S+ + + + ++ + + ++ A + L G + + Sbjct: 680 DNSLRPRFASSIEALNGSIAGLSSSADNPAEVDIAGKIDGYA---PVALNGAINPLLEDM 736 Query: 246 IYSGVFSVAGDFSKLLNLELSA--------KKSRLSGNFKISDGNVRISR-YKLQSILPN 296 FSV+G +N L + + D +R + + Sbjct: 737 FLDLNFSVSGAELTSVNPYSGTYMGHFIDRGLLSLDVKYSLQDNQLRGDNHVVIDQLTLG 796 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGA-----ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 TD D + L +G E DLN F +L + Sbjct: 797 RKTDSDQALSLPLGLAIALLQDSDGVIDLGMEVSGDLNNPSFGFGSIILKALGNLITKAV 856 Query: 352 QYSVNKKEEKDNSHDKENQENFS 374 + S D+ N+ FS Sbjct: 857 TAPFSLLANLVGSDDELNEVAFS 879 >gi|330448706|ref|ZP_08312354.1| asmA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492897|dbj|GAA06851.1| asmA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 1324 Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 44/372 (11%), Positives = 109/372 (29%), Gaps = 16/372 (4%) Query: 14 SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73 + G + ID T+ R D + + + ++ + G + + + P + D+ I Sbjct: 47 IIAATGVLAYGVKIDLTEHRHDINQWLSSTLDRETTIGGDMSLTLSFSPEIELSDVTIAN 106 Query: 74 --KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM 131 K + + LPLLS +++ + + L+ ++G NW K Sbjct: 107 TKAMKWEPMLKSGYIGAKISVLPLLSHTLKIDYLDLKDTSLHLVKDNQGNPNWMFGKDPQ 166 Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA 191 + ++ + + + L+ Q + ++ N+ + + Sbjct: 167 AKPK----QSTSSTPFKLALSNNIQADKVAVDYLD-QQTGQYTNVYLEQLALTKPDKWLL 221 Query: 192 EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 + GN + + + K+ +++ ++ Sbjct: 222 QAKGNAMGNDYDVSLAGDLESLINEQQGKLDATGSFAGAKLNINADIHPFRSNTPSKANV 281 Query: 252 SVAGDFSKLLNLELS-----AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 + + L L A L+ S + ++ L S + ++ D Sbjct: 282 KLDWVDTAQLESLLDIDLRHAAPMSLTTQITASSKGISLADIALTSPITSAKGFLDISLA 341 Query: 307 VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHD 366 + N +N N + + + Q S +K Sbjct: 342 QNAKALNHINGKLNIPLIDL----RPWLQPQPPVMYGVGYAAAAPQQSPLQKALDQWLVK 397 Query: 367 KENQENFSGDKM 378 E + S D++ Sbjct: 398 TETHLDLSIDEI 409 >gi|78224025|ref|YP_385772.1| hypothetical protein Gmet_2829 [Geobacter metallireducens GS-15] gi|78195280|gb|ABB33047.1| protein of unknown function DUF748 [Geobacter metallireducens GS-15] Length = 1200 Score = 96.1 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 106/335 (31%), Gaps = 30/335 (8%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP- 62 ++LIG +F ++L F+ + R G+K+++ + I PF Sbjct: 6 KILIG-CGIFLLILAAFTA---FVLPGMVKGRAIRAVEEATGRKLSIG---AVSINPFTW 58 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + + +R+ +++ + + + + G V + + P+++ + Sbjct: 59 NAEVRGMRLTERDGTTTFASFSSARVAVSPASIFRGAPIVSEARLRSPYVHLVRTGANAY 118 Query: 123 NW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLNLQISAR 172 N+ + + I V G I IDQ ++ + +S L L + Sbjct: 119 NFSDILEKKGPENPQPKKERARFSVSNIAVTNGSIDFIDQGLAVEKRHRVSGLELGVPFV 178 Query: 173 FL-----NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 +I ++ G SA + + + K+ I + P Sbjct: 179 STIPHYADIYIAPRFRAVVNGSPLVLDGKLRPFTSAAEYSLDVNLKDLDIPYYLAYVPAK 238 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 P+ ++ G + + + + + L + + L + R Sbjct: 239 LPVRVE-RGTAA-----TKLALTYRIDANKNPELVMTGELSLANLKAAGADGAPLAALDR 292 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA 322 + + T V+ D + + + +G Sbjct: 293 LGVMIGKSELLAPAISLTSVTLDG-PVFHLARDGK 326 >gi|207743948|ref|YP_002260340.1| hypothetical protein RSIPO_02131 [Ralstonia solanacearum IPO1609] gi|206595350|emb|CAQ62277.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609] Length = 1262 Score = 96.1 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 41/331 (12%), Positives = 98/331 (29%), Gaps = 33/331 (9%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFK 67 +G + L + E Q + + + + V KI + P+ + Sbjct: 50 IGLGVLIFLAVFGLLGGVGGPPLLHHLAETQLSKYLERPVTVG---KIRLNPYTLRLEID 106 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-- 125 + I +++ + I L + A + + + ++ +D P + +++ N+ Sbjct: 107 QLHIAERDGTTPFVDIGHLHVNAAWSSIFRRAPVIEELTVDAPRVRIVRTAEQRFNFSDI 166 Query: 126 ---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 K + + + + G I+ +DQ + + L + + Sbjct: 167 VDRLTRPEIPPKPKSNEPARFLFANLRLNNGAIQFVDQPLGAQHTVDGLQIGVPFL---A 223 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 P +D ++A D F A++ SL I+L L P + G Sbjct: 224 SLPADVDIFVQPLLA---ARIDGAPLHFAGKTKPFAQSLESSLNIKLDGLDLPRYL---G 277 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 + I G + + R+ G + + V Sbjct: 278 YVPGPLPVAIPQGKLTTD-LTIDFQKPKTGNPVLRVHGTAGLDNLEVT--------DAGK 328 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + + + + L+ + D Sbjct: 329 APLVATKQLRATLSDVRPLDNVYHLDALSLD 359 Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 27/278 (9%), Positives = 85/278 (30%), Gaps = 33/278 (11%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + ++ + + + L + L + + +D ++ ++ G Sbjct: 315 TAGLDNLEVTDA-GKAPLVATKQLRATLSDVRPLDNVYHLDALSLDGVRVDATRAADGSI 373 Query: 123 NWF---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV--YFLSDL 165 N+ + +V + K+ + I+ D + L DL Sbjct: 374 NFARLGGKPAPVEAKPAPSTPAAQPKPLDVAVGKLQLANSSIRWRDATTQPAADLVLDDL 433 Query: 166 NLQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKI 221 + ++ R L + L + + G++ +G+ + D + ++ + L+ Sbjct: 434 HGDVAVRTLGGPTTLDVGAKLASGGTLNVKGSTSLDKRTGELELKLDAIKLAAVEPYLRQ 493 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSG----------VFSVAGDFSKLLNLELSAKKSR 271 P + G + ++ ++A L + Sbjct: 494 AGAPQLQNGALSADGKIALEFGADTFNVRAEPLVATLADLALAPATRNDTALRAKQLRVD 553 Query: 272 LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + NF ++ + ++ + ++ + +D T ++ Sbjct: 554 VK-NFDLASRTLALNEVRSDALQLDVLRKQDGSTVLTL 590 >gi|83749101|ref|ZP_00946106.1| probable transmembrane [Ralstonia solanacearum UW551] gi|83724222|gb|EAP71395.1| probable transmembrane [Ralstonia solanacearum UW551] Length = 1262 Score = 96.1 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 41/331 (12%), Positives = 98/331 (29%), Gaps = 33/331 (9%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFK 67 +G + L + E Q + + + + V KI + P+ + Sbjct: 50 IGLGVLIFLAVFGLLGGVGGPPLLHHLAETQLSKYLERPVTVG---KIRLNPYTLRLEID 106 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-- 125 + I +++ + I L + A + + + ++ +D P + +++ N+ Sbjct: 107 QLHIAERDGTTPFVDIGHLHVNAAWSSIFRRAPVIEELTVDAPRVRIVRTAEQRFNFSDI 166 Query: 126 ---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 K + + + + G I+ +DQ + + L + + Sbjct: 167 VDRLTRPEIPPKPKSNEPARFLFANLRLNNGAIQFVDQPLGAQHTVDGLQIGVPFL---A 223 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 P +D ++A D F A++ SL I+L L P + G Sbjct: 224 SLPADVDIFVQPLLA---ARIDGAPLHFAGKTKPFAQSLESSLNIKLDGLDLPRYL---G 277 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 + I G + + R+ G + + V Sbjct: 278 YVPGPLPVAIPQGKLTTD-LTIDFQKPKTGNPVLRVHGTAGLDNLEVT--------DAGK 328 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + + + + L+ + D Sbjct: 329 APLVATKQLRATLSDVRPLDNVYHLDALSLD 359 Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 27/278 (9%), Positives = 85/278 (30%), Gaps = 33/278 (11%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + ++ + + + L + L + + +D ++ ++ G Sbjct: 315 TAGLDNLEVTDA-GKAPLVATKQLRATLSDVRPLDNVYHLDALSLDGVRVDATRAADGSI 373 Query: 123 NWF---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV--YFLSDL 165 N+ + +V + K+ + I+ D + L DL Sbjct: 374 NFARLGGKPAPVEAKPAPSTPAAQPKPLDVAVGKLQLANSSIRWRDATTQPAADLVLDDL 433 Query: 166 NLQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKI 221 + ++ R L + L + + G++ +G+ + D + ++ + L+ Sbjct: 434 HGDVAVRTLGGPTTLDVGAKLASGGTLNVKGSTSLDKRTGELELKLDAIKLAAVEPYLRQ 493 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSG----------VFSVAGDFSKLLNLELSAKKSR 271 P + G + ++ ++A L + Sbjct: 494 AGAPQLQNGALSADGKIALEFGADTFNVRAEPLVATLADLALAPATRNDTALRAKQLRVD 553 Query: 272 LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + NF ++ + ++ + ++ + +D T ++ Sbjct: 554 VK-NFDLASRTLALNEVRSDALQLDVLRKQDGSTVLTL 590 >gi|332286872|ref|YP_004418783.1| putative secreted protein [Pusillimonas sp. T7-7] gi|330430825|gb|AEC22159.1| putative secreted protein [Pusillimonas sp. T7-7] Length = 861 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 104/341 (30%), Gaps = 17/341 (4%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++RVLI L +F V LVG L D ++ E + + +KG I++ + P Sbjct: 1 MKRVLISLVVVFLVALVGIAIFLLTFDPNAYKNKLEEVVYNRYQRSLIIKGDIELSLFPR 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + +D+ + + + I+ PL+ + V + + +G Sbjct: 61 IGLSVEDVALSNRNSTDTFASIDSARFAVAIWPLMFNRLVVDHVAVTGFKAWVTRDEQGQ 120 Query: 122 SNW---FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 N+ R + L + +S S++ ++ Sbjct: 121 FNFRDLVDRPGAALGMMAPALAAKSLLPSARAETVPADRPPTVVSSAYAADSSQGTDLQI 180 Query: 179 P---LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 L + + + +G + ++ N+A + ++ + D Sbjct: 181 DIAGLDLKNGEIHFYDNVSGAV-GRIEKLEVNTGRMTANQAFDVALKGKLVGEYPEADAN 239 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELS--AKKSRLSGNFKISDGNVRISRYKLQSI 293 +S L AK + L GN S + +S L+ + Sbjct: 240 IEGQALVLFNPEQKSYSAQKINVVANGLLGPLVAKSATLRGNLAYSAYSQMLSASNLELL 299 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334 + D + +T S + + D ++ + Sbjct: 300 V---QGDIEGET-----PIKGFETSLSVPQLKVDRSQAELK 332 >gi|167617094|ref|ZP_02385725.1| hypothetical protein BthaB_12383 [Burkholderia thailandensis Bt4] Length = 885 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 86/287 (29%), Gaps = 27/287 (9%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66 G+G L +V+ G F R E+Q + + + + +I P+ + Sbjct: 17 GIGVLIFLVVFGLLG--FFAAPPLIRHVAEQQLSRQLERPATIA---RIAFNPYTLRLEA 71 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125 + + ++ I L +RA + L V ++ +DQP N+ Sbjct: 72 DGVHVGERGGQGDFVDIGKLVVRASWTSLARFAPIVDEVRLDQPRFRIVRYDAQRLNFTD 131 Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + I V GRI D+ + + + L I Sbjct: 132 LVDKFSKPSPQPSAKPVRFSVSNIQVNDGRIDFDDRLLNAKHVVDQWTLGIPFIATLPSK 191 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237 V + D A A+++ S+ ++L L P ++ Sbjct: 192 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKLGGLDVPRLLSYAPTR 245 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 L + + S V + R+SG ++D V Sbjct: 246 LPVDVRSGKLSSNLDV------NFAMAGDTPSLRVSGTVDLNDAQVT 286 >gi|94497865|ref|ZP_01304431.1| hypothetical protein SKA58_17393 [Sphingomonas sp. SKA58] gi|94422754|gb|EAT07789.1| hypothetical protein SKA58_17393 [Sphingomonas sp. SKA58] Length = 720 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 51/382 (13%), Positives = 102/382 (26%), Gaps = 30/382 (7%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFK 67 + F +L + + + FE + +++ V G +++ P + Sbjct: 40 IAIAFVGILFAIWLILFVTKGRFLKRPFEHVVGNSLNRQVRVDGDFQLYFAPITVKFLAE 99 Query: 68 DIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYLSSKGVSNW 124 IR+ + + + R L L+ G+ +RV + + ++ S N Sbjct: 100 GIRVSNTSWASRPDIFRADRIDSRIAPLSLIFGDKVRVRWLELRNGAVDLEWSRDHQHNT 159 Query: 125 FQRKSTMDMIHNVIL---EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + L + + G ++ D +Q+ Sbjct: 160 WTFGDPGKKGKPLNLPLVSRALLTGTTLRFRDPR-----------MQLGVDIGFDTVKAR 208 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKIT-ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 V G G A K + ++ A +D+ G L Sbjct: 209 DTQFTSEVRFAGDGTMRALPFALKGGLLSPDQTVTGGRNQLAARMEAGATRVDVSGTLPG 268 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295 + G L L R + + R + K + Sbjct: 269 ATQLEGSDLQMVAQGRNLARLFDFLGIVIPPTRTYRFTSDLTKVGEEWRFTHLKGRFGDS 328 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNET-DFFEEEEKKNKNDDLKKDDIQYS 354 + + VSQ E L + A D+ + F + +K + S Sbjct: 329 D----LAGRFTVSQPGERTL-IKGDLATQKLDIIDVGPFIGYDPEKLASQGAGGAIETVS 383 Query: 355 VNKKEEKDNSHDKENQENFSGD 376 + D E NF D Sbjct: 384 GTPRVLPDTPLRVEAIRNFDAD 405 >gi|238021969|ref|ZP_04602395.1| hypothetical protein GCWU000324_01874 [Kingella oralis ATCC 51147] gi|237866583|gb|EEP67625.1| hypothetical protein GCWU000324_01874 [Kingella oralis ATCC 51147] Length = 809 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 53/380 (13%), Positives = 127/380 (33%), Gaps = 27/380 (7%) Query: 6 LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65 L+ + V L G+ + + ++ R+A + + I+ + P P++ Sbjct: 3 LVACLIVAGVYLGGSAALYRVSEHEALQQR-AREALAGTKRTVQFDAQIERSLFPRPTII 61 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 ++ + + + + + + + + + L+S E + + ++ H +++G N Sbjct: 62 LHNVVLSEADGKAPALRAQEVKIGIGWSSLIS-EPTIEKLVLNDVHALLIRNNQGRWNIA 120 Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 T + V ++ + G + + D E + + S ++L + AR + +++ Sbjct: 121 DLWQTRNQRPAV-FNRVQINRGTLIVRDAEQGE-FAFSQISLAL-ARQNDTTIGYQLEAQ 177 Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 S E N + I++ + +++K Y L N W E+ Sbjct: 178 AQSPYWE---NLQLAAAGDTISSPNSQQFPKLAVKFNGKENGYTFSGSLKTNATWREQ-- 232 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 + S S N + ++L+ + I+ PN T Sbjct: 233 DFIAENSKLEIASYRHNSTFNISITKLASRY-GDTKLTGINAVFTAPGHPNQPTGTLAAA 291 Query: 306 KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL-----------KKDDIQYS 354 + + + E DLN + ++ N +L K I Sbjct: 292 QAQWQDN-----ELHSDEINLDLNTRNAQQDNLDINAKSELIWRNGSGIQLGKLKFISTQ 346 Query: 355 VNKKEEKDNSHDKENQENFS 374 + + + E NF+ Sbjct: 347 TTPQGTPRFASEMEGSLNFA 366 >gi|34498780|ref|NP_902995.1| hypothetical protein CV_3325 [Chromobacterium violaceum ATCC 12472] gi|34104631|gb|AAQ60989.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 716 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 41/326 (12%), Positives = 97/326 (29%), Gaps = 18/326 (5%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE 84 D R G+ + + G I + P P + + + I +++E Sbjct: 33 WQFDEAAVRSSLTHALQD-TGRSVRIDGRITPQVFPSPGIEIEKLSISDPGKPDAFARVE 91 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-KSTMDMIHNVILEKIH 143 L + ++PLL G V + + P G N + + + L+++ Sbjct: 92 MLRVSLAWMPLLFGNREVKALDLYGPSAGVSRGLDGQLNIADLFQRRHQDSYTLKLDRLT 151 Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203 V+ G + + DQ + L+ ++L D+++G+ D+ R Sbjct: 152 VREGTLLLSDQLTHTDKRLASISL-------------DADNLRGTADVSFGAILDDDRRP 198 Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL 263 ++ P + + + I G Y F+ + + Sbjct: 199 VRLALTTPLTIQDDQVSLPELEAVAISNIQGLGETKLTI-AGQYKLNFASLQATGSEVTV 257 Query: 264 ELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 ++++ + N + + S ++ +++ N + Sbjct: 258 SFTSERPSSEVKLTLPQINASLRELTMPSGSLSAKLSY-ARSQYQLQAALD-NLKLSEGG 315 Query: 324 SMHDLNETDFFEEEEKKNKNDDLKKD 349 D + +F N L Sbjct: 316 LYADKLDGEFNWLAGSSKVNVKLNAP 341 >gi|325523558|gb|EGD01861.1| hypothetical protein B1M_24440 [Burkholderia sp. TJI49] Length = 295 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 43/284 (15%), Positives = 84/284 (29%), Gaps = 30/284 (10%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68 G L +VL G F R E+Q + + + ++ +I + P+ ++ Sbjct: 31 GVLIFLVLFGLLG--FFAAPPLIRHIAEQQLSKQLDRPATIQ---RIALNPYTLNLEADS 85 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ-- 126 I + ++ I L +R + L G V ++ +D P + N+ Sbjct: 86 IHLGERGGQGDFIDIAKLVVRPSWTSLFRGAPIVNEIRLDSPRFHIVRYDAQRFNFTDLI 145 Query: 127 -----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + I V GRI D+ ++ + + + L I Sbjct: 146 EKFSTPSKPDSKPTLFSVSNIQVNNGRIDFDDRLLNEKHVVDNWTLGIP------YIATL 199 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN---L 238 V FD A A+++ + ++ L P +I + Sbjct: 200 PSKTDIFVQPTLRLRFDGSPIAIDGKTKPFAQSRESEIALKFDKLDVPKLISYAPTKLPV 259 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 S A + R+SG ++D Sbjct: 260 AVTSGLLSSDLALSFA--------MNGETPALRVSGTVDLADAK 295 >gi|313667930|ref|YP_004048214.1| AsmA family protein [Neisseria lactamica ST-640] gi|313005392|emb|CBN86826.1| putative AsmA family protein [Neisseria lactamica 020-06] Length = 700 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 46/380 (12%), Positives = 111/380 (29%), Gaps = 28/380 (7%) Query: 4 RVLIGLGFLFSVVLVGAFT---VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 R+ + L ++L V + R ++ +KI+ I+ +LP Sbjct: 11 RLKYAVAVLTILLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLP 69 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 P+V K++ I + I+ + + L S +I+V + L KG Sbjct: 70 RPTVILKNLTITEPGGDRTAVSIKETKIGLSWKNLWSDQIQVEKWVVSGAELALTRDGKG 129 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 V N + +I ++ +++ + + L ++ L + + Sbjct: 130 VWNIQDLIDNPKRKA--SVNRIIIENSTVRLD--FLQERFTLKEVRLNLQSPDSAGQ--- 182 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 +S V + + + ++ P + + + + I + G+ Sbjct: 183 QFESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEAETALNGHRIAVSTTGSPTI 241 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 + NL L+A+ L + + ++I ++ Sbjct: 242 RFNAGGADAADLALRADTAFHNLHLTAQIPAL----ALRNNGIKIETANGTFTAAGENSQ 297 Query: 301 EDNKTKVS-------QDEENLLNFSENGA----ESMHDLNETDFFEEEEKKNKNDDLKKD 349 K+ S N ++ L + + L Sbjct: 298 WGGSFKLDRADLHPGIGNIGNAEISGNVKTPRLQTNFSLGSPLVWSRNNG-LEAPRLHVS 356 Query: 350 DIQYSVNKKEEKDNSHDKEN 369 +Q +VN+ + + Sbjct: 357 TLQDTVNRLPQPRFISRLDG 376 >gi|33594346|ref|NP_881990.1| hypothetical protein BP3467 [Bordetella pertussis Tohama I] gi|33564421|emb|CAE43730.1| putative exported protein [Bordetella pertussis Tohama I] gi|332383757|gb|AEE68604.1| hypothetical protein BPTD_3419 [Bordetella pertussis CS] Length = 839 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 41/373 (10%), Positives = 108/373 (28%), Gaps = 41/373 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82 L D ++ E + + ++G I++ + P + + + + + + Sbjct: 26 FLLTFDPNAYKYKLEEAVQARYERTLNIEGEIELSLFPRIGLAVQGVSLSEPNSPDVFAS 85 Query: 83 IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--------------- 127 I+ + + PLLS + V + I+ N+ Sbjct: 86 IDSMRLAVAVWPLLSNSLVVDHVTINGFKARVIRGKDSHFNFENLVGGSVQSTDVPGNAA 145 Query: 128 -----------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + + + + +K G I++ D S ++ LN Sbjct: 146 EATAGAITGTAQAIVNGTVSTPKSMQIDIAGLDLKDGEIQLQDAMSGMAVAITKLNAATG 205 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-PLAYP 229 N +S+ + + + + L+++ P A Sbjct: 206 RVTYNQPFDVSLSARVEGGNPRLDAGLTGQAQLTLDPLAKRYAAQRLDLRMEGRLPGAQA 265 Query: 230 IIIDLFGNLFWNEKQPIYS-------GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 + GN+ +N + +KL N+E S +L+ + ++ Sbjct: 266 KSLAARGNVAFNGMTSSLDVAGLEILFQGDIVDTATKLTNVEASVAMPKLAVDPHKTELQ 325 Query: 283 VRISRYKLQSILPNSSTDEDNKT-KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341 + + + +P + ++ N + +G +L+ + Sbjct: 326 IDKLAVRAKGAMPGGPFELAVDAPALNISPTNASGDALSGRVRTQELDASFGLNGISGNA 385 Query: 342 KNDDLKKDDIQYS 354 D+K+ + + Sbjct: 386 GELDIKEAKLDST 398 >gi|85716795|ref|ZP_01047762.1| hypothetical protein NB311A_10433 [Nitrobacter sp. Nb-311A] gi|85696402|gb|EAQ34293.1| hypothetical protein NB311A_10433 [Nitrobacter sp. Nb-311A] Length = 640 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 97/303 (32%), Gaps = 29/303 (9%) Query: 2 LRRVLIGLGFLFS-VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 + R L G + + +V + + I + + G ++ +KG I + P Sbjct: 1 MARALKIAGLVAASLVTIVIVLLVTGIPSGFVASLVQDRIERDTGYRLTIKGTTGIDLWP 60 Query: 61 FPSVFFKDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF---- 114 P + +DQ G + + + E LLSG +++ ++ ID P L Sbjct: 61 SPGFALHLVTLDQPGSAAGDAQIVVGEIRAAFELASLLSGTLKISELAIDHPTLRMPLLR 120 Query: 115 YLSSKGVSNWFQRKSTMDMIHN-VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 +S GV + R ++++ V G I D ++ ++D+N ++ R Sbjct: 121 ERTSSGVPSRPDRSEEASEGDTLFPVDRVTVSNGAIVFFDPQTGWENRVNDVNASLTLRA 180 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 + G ++ F I A PA L + P + + Sbjct: 181 DR------------QIKITGDARSGDRSLTFAIAATPPAG----PLGRRNVPTELTLEVS 224 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 + + + L S + +G + + + + L Sbjct: 225 GAPAHQLAARA-----EVRINRQTLLINGLSGSLDDGKFNGWASVDLASKPLVKIDLDFH 279 Query: 294 LPN 296 + Sbjct: 280 RLD 282 >gi|94312879|ref|YP_586088.1| hypothetical protein Rmet_3951 [Cupriavidus metallidurans CH34] gi|93356731|gb|ABF10819.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 1337 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 43/325 (13%), Positives = 93/325 (28%), Gaps = 35/325 (10%) Query: 12 LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71 L L G F P I + E+ AT +G+K+ + G + S ++ I Sbjct: 48 LAVFGLAGYFGGPPLI-----KYLVEKNATEALGRKVTL-GEAHVRPF-SLSATINNLTI 100 Query: 72 DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------ 125 + + + + + + + +++D ++ + G N+ Sbjct: 101 YEPDGKTPTVTLGEAEAKTSAASVWHLAPVIDSLHVDALSVHVLRDANGRMNFADVQERF 160 Query: 126 ---QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 K + I V D+ + V + + L + N+ +++ Sbjct: 161 AALPPKPADAKPARFSVSNIAVTNTSFVYEDKLLNTVQRVENFTLTLP-FLSNLPHDVTL 219 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242 ++ + A T A ++ +L I L L + L E Sbjct: 220 NTAPSLF-----AKINGSPLALAGTMQPFADSREANLNINLDGLEVAKYMAFAPKLKDAE 274 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 + V + E + +SG + D +V + + Sbjct: 275 VKSGL-----VDTRLNVGFRQEKDKQDLYVSGTIALRDADV--------VTHAGAPLVKA 321 Query: 303 NKTKVSQDEENLLNFSENGAESMHD 327 + V D L + D Sbjct: 322 GRLAVDLDRVEPLAHKAHVKSIELD 346 Score = 39.9 bits (91), Expect = 0.76, Method: Composition-based stats. Identities = 34/337 (10%), Positives = 88/337 (26%), Gaps = 55/337 (16%) Query: 77 GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---------- 126 G+ K L++ + + L+ + V + +D L + G + Sbjct: 315 GAPLVKAGRLAVDLDRVEPLAHKAHVKSIELDGFGLLATRGADGALDLATAFLPEGMKSA 374 Query: 127 ---------------------------RKSTMDMIHNVILEKIHVKGGRIKIID---QES 156 ++ + +++I +K ++ +D Sbjct: 375 PAKAPAAAPVTATPAPASVVAASGVQVPPKAEEVPWSYAVDRIAIKDAKLGFVDAMAPSG 434 Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANFPA- 212 + +N+ I+ P +D+ I + +G D K+ T Sbjct: 435 PGKLDIGPVNVDIANLASTGDKPAKLDATVTIADGQTIKQSGELDLKKGTLNGTLETAGV 494 Query: 213 --KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL--ELSAK 268 + A +L I+ N QP++ + L + Sbjct: 495 RPQGFAAWWPHELRSQFGDTGINAELNYKMAWSQPVFQFTLEKSRLELSPLYVATREPVN 554 Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328 +GN + K ++ + ++ L + + D Sbjct: 555 LPASAGNDDRATKAAS-PAPKGRAGRAQRGNRASQRVADTEGANLPL---LRADKLVLDD 610 Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSH 365 + D ++ + + + Q + + Sbjct: 611 IQLDLAKQTFEAGQ---VSLAKPQIAATRDHSGQLLE 644 >gi|167838651|ref|ZP_02465510.1| hypothetical protein Bpse38_19232 [Burkholderia thailandensis MSMB43] Length = 1243 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 86/288 (29%), Gaps = 27/288 (9%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65 G+G L +V+ G F R E+Q + + + + +I P+ + Sbjct: 27 TGIGVLIFLVVFGLLG--FFAAPPLIRHVAEQQLSEQLDRPATIA---RIAFNPYTLRLE 81 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 + + ++ I L +RA + L V ++ +DQP N+ Sbjct: 82 ADGVHVGERGGQGGFVDIGKLVVRASWTSLARFAPIVDEVRLDQPRFRIVRYDAQRLNFT 141 Query: 126 QRKSTMDMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 + I + GRI+ D+ + + + + I Sbjct: 142 DLVDKFSKPSPQPSPKPVRFSVSNIQINDGRIEFDDRLLNAKHVVDQWTVGIPFIATLPS 201 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 V + D A A+++ S+ ++ L P ++ Sbjct: 202 KTDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDMPRLLSYAPT 255 Query: 238 -LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 L + + S V + R+SG ++D V Sbjct: 256 KLPVDVRAGRLSSDLDVK------FAMAGDTPSLRVSGTVDLNDAQVT 297 Score = 43.0 bits (99), Expect = 0.077, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 91/305 (29%), Gaps = 41/305 (13%) Query: 40 ATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE 99 + + K A+ G + +V D ++ + + + + A L L Sbjct: 266 LSSDLDVKFAMAGD-TPSLRVSGTVDLNDAQVTSRAN-EPLFAAHAVHVAAAQLEPLRNV 323 Query: 100 IRVFDMYIDQPHLNFYLSSKGVSNW------------------FQRKSTMDMIHNVILEK 141 + D+ IDQP ++ GV N + ++ +++ Sbjct: 324 LHFDDIRIDQPVVSLARDKAGVLNVMKLAGGANGAPAASRAAAASAAAGKAQPLDLTIKR 383 Query: 142 IHVKGGRIKIIDQESDQVYFLS-------DLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 + G + + D +S + ++ + + + + GS+ AEG Sbjct: 384 FAINDGTLNLNDASLATPAAISLRHVATTLADFTLAGKTPARYTLATDVASGGSLKAEGA 443 Query: 195 GNFDNKRS-------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 + +++ A + P A S ++ L+ + + Sbjct: 444 FSLAARQADTLLVVDALALPVVQPYLAGATSARVLDGALSTSVKAKAD-WSKTPLDAQVS 502 Query: 248 SGVFSVAGDFSKLLNLELSA-----KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 + L N + A + +++ + I+ + + + ++ Sbjct: 503 DSELGLKSLRIALPNAKTPAVALPDARVKVT-KIDFAARTAEIASVDATGLALDVARLQN 561 Query: 303 NKTKV 307 + + Sbjct: 562 GQIDL 566 >gi|237747638|ref|ZP_04578118.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229379000|gb|EEO29091.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 1120 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 48/371 (12%), Positives = 113/371 (30%), Gaps = 24/371 (6%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED 76 G + +P ++ + +++ ++ + I +L + + + Sbjct: 38 AAGIYFLPRIVESGA-----KEFVAEKFNRELTIQ-KLDIDLL-NLTAKLDGVVLTDPGS 90 Query: 77 GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN------WFQRKST 130 + + L + V ++ + P ++ K N + + Sbjct: 91 KDPFASFDHLFVELSPETFSERAPVVKEVRLVNPKIHIVRYGKKQYNINDLVAYATQPKE 150 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + N + I + G I++ D + + + +LN+ I ++ Sbjct: 151 DESKSNFSINNIQIDNGTIRVDDLQRKKTLLIDELNIDIPVIANMPSQVEIFTALA---- 206 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250 N D K K+ + ++L L P + G L ++ + SG Sbjct: 207 ISAKVNNDRIELVGKSRTKPAYDKKSGKISVKLDKLDLPTYL---GYLPFDPGFKLKSGK 263 Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN-KTKVSQ 309 FS ++ +K R+ ++ +V ++ ++L S D K+ + Sbjct: 264 FS---ADLDIIFPRKKEEKRRILVRGDVTLNSVSLAESNGAAVLKFSELKVDIDKSDILS 320 Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369 + + E D N + E N K EK + Sbjct: 321 GKIGIGRIGLKNPEVFLDRNNNGQWNVELLLNTGKKTDTGTQTAKNEKPAEKQSFAIDLG 380 Query: 370 QENFSGDKMIL 380 Q SG ++ + Sbjct: 381 QLAVSGGQVFI 391 >gi|293607174|ref|ZP_06689516.1| hypothetical protein HMPREF0004_5092 [Achromobacter piechaudii ATCC 43553] gi|292814508|gb|EFF73647.1| hypothetical protein HMPREF0004_5092 [Achromobacter piechaudii ATCC 43553] Length = 1228 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 91/316 (28%), Gaps = 32/316 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61 RR L + +V L+ + ++G+ ++V KI PF Sbjct: 12 RRAGKILLGIVAVALILCGIAAWQV-PRVLHNALTDDVAKLIGRDVSVG---KISFNPFT 67 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 ++ +D+ + Q + + L + A + L V + + QP + Sbjct: 68 LTIRARDLAVAQPGSQTPLLTLAELDVSAAWSSLFWFAPVVDRLTLRQPTIAIVREDVTR 127 Query: 122 SNW---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 N+ + + L + ++GG I + D+ + + + +L Sbjct: 128 FNFSDIQQRVAQLTADQPAEPPKPDAGLPRFSLNNMVIEGGAITLDDKVTGRKQVVDELG 187 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 L + + V + A K + +L++ L Sbjct: 188 LGVPFISTFGYAT------DIDVQPRLHLRINGSPFDLTGVARPFDKVPSSTLRVAFNGL 241 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 D+ + S + + + + K R+ G+ + + Sbjct: 242 QLEKWADV---WPMPLPFKLNSALLD-SNLQVVFEQPKDAPPKIRVVGDLGL--RRFDLK 295 Query: 287 RYKLQSILPNSSTDED 302 ++ S+ Sbjct: 296 DSAGDTLAAWSALTVT 311 >gi|194333760|ref|YP_002015620.1| hypothetical protein Paes_0930 [Prosthecochloris aestuarii DSM 271] gi|194311578|gb|ACF45973.1| hypothetical protein Paes_0930 [Prosthecochloris aestuarii DSM 271] Length = 911 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 94/332 (28%), Gaps = 30/332 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-- 59 + +++ ++ G I + + + +I I + Sbjct: 1 MNKLIKFFLLTVVLLFAGLMVFLQIIKP-RISDTIKSVLNERLNAQIDYS-DAGISLFQS 58 Query: 60 -PFPSVFFKDIRI----DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 P +V D+ + E S+ L G V+ + D+P + Sbjct: 59 FPRITVTLHDLLVESQPADSAVADTLGSFERFSVSFNPFSLFQGRFDVYALRFDKPQIVI 118 Query: 115 YLSSKGVSNWFQRKSTMDM--------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 G NW ST ++ L V + D++ L N Sbjct: 119 ENDETGHLNWDIFPSTDADEEASSASRPFSLNLHDFRVVDATVIYRDRKGSAALELGGWN 178 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 Q+ RF S + + + + G +A + A+ A ++ L Sbjct: 179 NQLKGRFSGESSVIHMVNTVNELTLAAGGVTSIDHAAVSLNADIDADFINKKFTLRKNRL 238 Query: 227 AYP-IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA------------KKSRLS 273 + + L G + + F K L + A + +S Sbjct: 239 TLNELGVVLDGTVSLMDDGLNTDLDFKADDITLKNLLSLVPALYTHNFNRLDAEGRVAMS 298 Query: 274 GNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 G+ K + ++ +KL + + S D Sbjct: 299 GHVKGLMRDGQVPAFKLAVDVSDGSFGYDGVA 330 >gi|121594033|ref|YP_985929.1| hypothetical protein Ajs_1662 [Acidovorax sp. JS42] gi|120606113|gb|ABM41853.1| protein of unknown function DUF748 [Acidovorax sp. JS42] Length = 1235 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 38/279 (13%), Positives = 90/279 (32%), Gaps = 26/279 (9%) Query: 13 FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71 + GA+ + + + ER A+ +G+K+ V+ ++ LP+ + + Sbjct: 17 LVLCWGGAWLLGWLVVPPLAQSQIERHASEALGRKLTVE---RVEFLPWTLEATLHGVAL 73 Query: 72 DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR---- 127 K+ S + ++ + + AE L G + + +D P + + GV + Sbjct: 74 ASKDGSSEQVRVGRIYIDAELQSLWRGAPVIDALQVDDPVVRVTQLAPGVYDVDDLLALM 133 Query: 128 ------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + + L I +KGG ++ D+ V+ L + L + Sbjct: 134 AAKPQDEKSATEPAHFALFNIALKGGVVEFDDRTVGVVHTLRRVELDVP------FLSSF 187 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + V + A + +++ + DL + Sbjct: 188 SADREVKVTPRLAFELNGSTFDTSAMATPFMDARQAEVRLHIEN------FDLAPFGRYL 241 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280 G +L + + +SG+ ++S Sbjct: 242 PPSVPVRLKAGRLGADIQLGFEQRETPRLLISGDVQLSG 280 >gi|144899543|emb|CAM76407.1| protein involved in outer membrane biogenesis [Magnetospirillum gryphiswaldense MSR-1] Length = 745 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 79/281 (28%), Gaps = 21/281 (7%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIE 84 ID+ ++ G+K+ G +K+ + PS+ +I + G+ +I+ Sbjct: 28 IDFERYKGYIADLVETETGRKLTFGGPVKLRLGLVPSLIADNITLSNPAGGAPGPMIRIQ 87 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV 144 + LL EI + + + P + + + N K L ++ + Sbjct: 88 RVEAEVALPALLRKEILIQRLIVSSPEIVLENENWKLDNGRADKQASGTPTRFDLRELKI 147 Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204 K ++ + Q + + + +++ E TG N +A Sbjct: 148 KNAKVSWRGTDGRQTLVAVHKLVLLPEQGAGTGLGVNVVGDSQGRTFEFTGKVGNLGAAL 207 Query: 205 KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL---- 260 + L I+ + G + S D Sbjct: 208 AGK----------PWPVSLKGAGTGTIVSVDGTIGTLNSFTGLDFKVSFQTDELSDFLYM 257 Query: 261 -----LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 RL+ + G + + + + + Sbjct: 258 AGYGNGRGNGLLGPMRLAARLHDTGGVLALDDMDVSAGKRD 298 >gi|304311597|ref|YP_003811195.1| Uncharacterized protein involved in outer membrane biogenesis, AsmA family [gamma proteobacterium HdN1] gi|301797330|emb|CBL45550.1| Uncharacterized protein involved in outer membrane biogenesis, AsmA family [gamma proteobacterium HdN1] Length = 774 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 49/371 (13%), Positives = 116/371 (31%), Gaps = 48/371 (12%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLS 87 D D+R + + G + + G + P ++ + KE +++ L Sbjct: 31 DPNDYRAEISERVQAQTGVVLTM-GKLGWSFYPLLGFQAGNVHVAMKEGAPQVAELTSLV 89 Query: 88 MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-------------- 133 + LPLL +I V + I + G +NW + Sbjct: 90 VGVRVLPLLQKQIEVDGVEISGLKAHLQTDKNGRNNWALDAGSAGDAASSEGNTKPGAAA 149 Query: 134 -----------------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 + + + +I ++ ++ DQ +D Y + +L++ L+ Sbjct: 150 AETKSTGTSETAGEASALPPLQIGRIVLRDSSVRYEDQSADADYQVDLQSLELRNVQLDT 209 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA-YPIIIDLF 235 PLS + + +A + + + A L+I + L Sbjct: 210 PFPLSAKLR---LRDGKGLDVQLALAAKLLAGSSLKQFSAQDLQITTDVSGVLGKTLHLA 266 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 + N + +A + NL + + L+ + + +G + ++ + + +L Sbjct: 267 LSGGLNADLDKDTASLQLAKVEVENANLSGDFRVTGLTKSLQW-EGTLALASFDPKKLLA 325 Query: 296 N----SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF---EEEEKKNKNDDLKK 348 N + D+K NF+ G + + + D K Sbjct: 326 NLGMKAPVTADSKALTRVGA----NFTLKGTDHNVVIEPLQVSLDESHLRGRVAVSDFSK 381 Query: 349 DDIQYSVNKKE 359 +++ ++ Sbjct: 382 QALEFKLHLDA 392 >gi|237747044|ref|ZP_04577524.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gi|229378395|gb|EEO28486.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 1379 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 37/343 (10%), Positives = 104/343 (30%), Gaps = 35/343 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59 LR L G + +V V + + ++ + E A+ +G+ + + Sbjct: 53 LRTALTGFFIFYLLVASVFLGVRYLVLPHVSAYKSELETLASESIGRPVTFS-RVSASWY 111 Query: 60 -PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 P + +++R+ + ++E +S + L ++R+ + ID+P + Sbjct: 112 GLQPKIDLENVRVADSNG-NEVVRLENVSAIVSWWSLPLMDVRLASLQIDRPDITVMRDK 170 Query: 119 KGVS-------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQIS 170 +G + + + +I + G + D+ + L ++ + Sbjct: 171 QGRFHVAGVLVDPAAQNENSIADWILKQHEIVLSDGVLHWKDEFRNGAELNLEQVDFAMK 230 Query: 171 ARFLNIIS---PLSIDSIKGSVIAEGTG---NFDNKRSAFKITANFPAKNKAISLKIQLF 224 R + + GS+ G F +K S + + + Sbjct: 231 NRGRRHKFRMTAVPDSQLTGSLDIRGNLLHPRFADKISDISRWKGELYVDMS-----GVD 285 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + D + + ++ L ++ + RL Sbjct: 286 MAEWKRLADFP--IGLISGRGAVQAWLTLDEFQLTGLTADIDGEDIRLK-------MEAT 336 Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQD--EENLLNFSENGAESM 325 + + L S + + + + + + ++S + Sbjct: 337 LPQLDLLKASGRLSIQKTGRPPLVKGAEAKPVYSYSASHLSLE 379 >gi|307151842|ref|YP_003887226.1| hypothetical protein Cyan7822_1969 [Cyanothece sp. PCC 7822] gi|306982070|gb|ADN13951.1| protein of unknown function DUF490 [Cyanothece sp. PCC 7822] Length = 1982 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 42/379 (11%), Positives = 111/379 (29%), Gaps = 17/379 (4%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67 G + ++ +G + + + Q + + +K+ + + + F Sbjct: 33 IGGGVLILLGIGGYLGVRYFVYEKLSPLVSTQLSNYINRKVNIGKVESFSL---THIRFG 89 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127 I ++ + ++ ++LP L G D+ I P+L G + Sbjct: 90 TSSIPATPTDLDTLSLKAVDIKFDWLPFLLGRPLPLDVTIVDPNLYLDQDKNGKWTNIEL 149 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL-NL-QISARFLNIISPLSIDSI 185 + K+ ++ + + ++ + NL + ++ L + + Sbjct: 150 PKNQRELPIDFDLKVRLEDADLDLKPYALKKIIPIQAAGNLRYTKTKVQDLQYNLDVALL 209 Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL--KIQLFPLAYPIIIDLFGNLFWNEK 243 + V +G ++ ++ +T N A + ++L L + +L N+ E Sbjct: 210 QSQVNVKGQSVIESGKTRLNLTVNRLALTELVTLIPNAPLKLNSGVFNANLNLNVPSFEN 269 Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 G V+ L A + + + V + + ++ Sbjct: 270 IEGTQGQGQVSLSQLAGRIPSLQAPLNA-NIQIRFQGQKVLVDAFDANV----NNIVAQA 324 Query: 304 KTKVSQDEENLLNFSEN----GAESMHDLNETDFFEEEEKKNK-NDDLKKDDIQYSVNKK 358 K + + LN + + + + K N Sbjct: 325 KGSIDWQQGYNLNVEIKPFKFSNLARLVSLSLPLKVDGQLQLKFKITGAVTQPLIIGNIN 384 Query: 359 EEKDNSHDKENQENFSGDK 377 + DK + N + + Sbjct: 385 NKNPVLLDKLSLRNINANF 403 >gi|92114830|ref|YP_574758.1| hypothetical protein Csal_2712 [Chromohalobacter salexigens DSM 3043] gi|91797920|gb|ABE60059.1| protein of unknown function DUF748 [Chromohalobacter salexigens DSM 3043] Length = 595 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 108/346 (31%), Gaps = 39/346 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFT----VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58 RR+ GL L V ++ +P +ID + T G+++ + + + Sbjct: 15 RRLGWGLSVLAGVAVLLLVAWWWALPAYID-----HRLSQMLTERSGRQVTID---DVTL 66 Query: 59 LPFPS-VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 P+ V +RI + D + + ++ L R + + P L Sbjct: 67 TPWRHQVTLDGLRIAGQADTPVFAS-RRVVATLDWHSLFDAGWRFERVDLTSPRLQLIWR 125 Query: 118 SKGVSNWF--QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 + G N + ++++ V GR+ I++ D LS NL + AR + Sbjct: 126 AGGEWNLARLFGGGGGGGSAPLRIDRLTVSDGRLDWINRRPDAPLTLSLKNLDLEARHYD 185 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 +S +G ++ F +L I L P+ L Sbjct: 186 -------NSDDRPFALQGQADWRGGTLKGTGEMGF----SPWTLDIDLDADQVPLTA-LS 233 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF--------KISDGNVRISR 287 G L + SG A + + + G R+ R Sbjct: 234 GYLAHVVRAEPSSGALD-ARIRLRSGRASDAGTQVNGQGGIEGLEMHDPDTDQPVARVER 292 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN-GAESMHDLNETD 332 ++ L +S + E L+ + + ++ DL + Sbjct: 293 LAVE-GLTFASARPALTAERVSLEAPWLDVTIDERLDTNLDLWQPP 337 >gi|294506901|ref|YP_003570959.1| hypothetical protein SRM_01086 [Salinibacter ruber M8] gi|294343229|emb|CBH24007.1| conserved hypothetical protein [Salinibacter ruber M8] Length = 1019 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 91/273 (33%), Gaps = 19/273 (6%) Query: 3 RRVLIG----LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58 RR+L LG L +VL A +P + G+++ + I + + Sbjct: 38 RRLLKWGGGLLGGLLVLVLAAALLLPRLFTSEQLKGYVVPPLEEATGRQVHID-AIGLRV 96 Query: 59 LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 LP P+V R+ E + + L++ PL +IR + ++ P + + + Sbjct: 97 LPAPAVRVSGFRLANAEGYGPAPAVEARALTVDVALWPLFLLDIRPTAVALEAPVVRYEV 156 Query: 117 SSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 G +N+ + + + V G R+ D+ + Q L DL+ Q Sbjct: 157 GKDGATNFDDLGASDTTAAAGDESPLAGIPVSSFRVSGARMNYADRSTGQALRL-DLDAQ 215 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ---LFP 225 +SAR SV A + + A + + +++ L Sbjct: 216 LSARPDGAAITSEGTVDLRSVRALLPSVGPDTLVVQEAAATYDVRVAPSEGEVEVRTLQL 275 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS 258 P+ I G + QP F Sbjct: 276 DTAPVTITADGTIAGLNAQPALDLAFETGRTDL 308 >gi|222111234|ref|YP_002553498.1| hypothetical protein Dtpsy_2042 [Acidovorax ebreus TPSY] gi|221730678|gb|ACM33498.1| protein of unknown function DUF748 [Acidovorax ebreus TPSY] Length = 1235 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 39/292 (13%), Positives = 93/292 (31%), Gaps = 25/292 (8%) Query: 13 FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71 + GA+ + + + ER A+ +G+K+ V+ ++ LP+ + + Sbjct: 17 LVLCWGGAWLLGWLVVPPLAQSQIERHASEALGRKLTVE---RVEFLPWTLEATLHGVAL 73 Query: 72 DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR---- 127 K+ S + ++ + + AE L G + + +D P + + GV + Sbjct: 74 ASKDGSSEQVRVGRIYIDAELQSLWRGAPVIDALQVDDPVVRVTQLAPGVYDVDDLLALM 133 Query: 128 ------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + + L I +KGG ++ D+ + V+ L + L + Sbjct: 134 AAKPQGEKSATEPAHFALFNIALKGGVVEFDDRTVEVVHTLRRVELDVP------FLSSF 187 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PIIIDLFGNLFW 240 + V + A + +++ + P L ++ Sbjct: 188 SADREVKVTPRLAFELNGSTFDTSAMATPFMDARQAEVRLHIENFDLAPFGRYLPPSVPV 247 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN---VRISRYK 289 K + G + L + +LSG ++ + Sbjct: 248 RLKAGRLDADVQL-GFEQRETPRLLISGDVQLSGVHATDAQEQPLLQFEEMR 298 >gi|148263439|ref|YP_001230145.1| AsmA family protein [Geobacter uraniireducens Rf4] gi|146396939|gb|ABQ25572.1| AsmA family protein [Geobacter uraniireducens Rf4] Length = 1104 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 36/299 (12%), Positives = 96/299 (32%), Gaps = 27/299 (9%) Query: 21 FTVPLFIDWTDFREDFERQATLIVGKKIAVK-GGIKIHILPFPSVFFKDIRIDQKEDGSF 79 + ++ + + +++ + G + P S F ++ + +K+ + Sbjct: 56 VLLDKLFHLESYKTQILAEIEKSLNRRVFYEKGEFSLQFGP--SFTFSNVVVKEKDGLTN 113 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVIL 139 + L+ + LPLL ++ + +M D+P + ++G+SN + L Sbjct: 114 FVTAKRLTFKIALLPLLEKKVSLKEMVFDRPDIALSRDNQGISNISDLLEAKKTAVTLHL 173 Query: 140 EKIHVKGGRIKIIDQE---SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196 + I +K G I+ D + L + +L IS + + + + + Sbjct: 174 KGIRLKKGTIRFQDMAITPAGITTVLENTDLNISQFARSKSCDVKLTASIAGFSKGNRFS 233 Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYP----------------IIIDLFGNLFW 240 + P + ++K+ L D+ N Sbjct: 234 LAGTAKLSD--KDKPLSETSFNMKLDAKNLDVAHFWPYYSKYVPFRKILGRFDIDTNFIG 291 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---LSGNFKISDGNVRISRYKLQSILPN 296 + +G ++G + + R + ++++ ++ + L N Sbjct: 292 SFFAFTSNGEMKISGLRFDYPQVFHAVLAPRDLHFRYDMELTNRDISVKSLNLTVDGLN 350 >gi|88706128|ref|ZP_01103835.1| AsmA [Congregibacter litoralis KT71] gi|88699522|gb|EAQ96634.1| AsmA [Congregibacter litoralis KT71] Length = 620 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 50/368 (13%), Positives = 113/368 (30%), Gaps = 33/368 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R +L LG ++++ A VPLF+D E + G ++ + G + + P Sbjct: 1 MRVLLWVLGVPLVLIILAAILVPLFLDEEALVEIAAERIKEQSGAELRIDGDASLSLFPK 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 ++ + + D + S +PL + + + +D L+ + Sbjct: 61 VALSASAVSL-NVPDSKTRIVADSFSAGVALMPLFRKSVEIDSIRVDGLTLSAEAVDEEA 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + +T + E V+ E+ L L++ L I ++ Sbjct: 120 AKAEAMDTTTLSNSELD-EFYAVRAQARAKAQAEAAASVLAVPLALEVGELSLADIHVIT 178 Query: 182 IDSIKGSVI-------AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 +DS + N D + P+ + P+ I L Sbjct: 179 VDSDGQPISELQLRQLTAKDLNIDGRPVPLTAEVIIPSGD-----------DKDPMSITL 227 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 G N ++ ++ LSG F + + + +LQ+ Sbjct: 228 AGEFRTNLNAE----TLNLDSLNLRVTGATPDPITLGLSGEFALDTQVADL-KLELQTGD 282 Query: 295 PNSSTDE--------DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346 S ++ E N G ++ ++ +++ + + + L Sbjct: 283 LKGSGTLRYASFESPQIDADLALTELNPALLVLAGPDAGAEVADSEASADGDTSLPLNAL 342 Query: 347 KKDDIQYS 354 + D + Sbjct: 343 RMIDTRAK 350 >gi|320353630|ref|YP_004194969.1| AsmA family protein [Desulfobulbus propionicus DSM 2032] gi|320122132|gb|ADW17678.1| AsmA family protein [Desulfobulbus propionicus DSM 2032] Length = 902 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 81/298 (27%), Gaps = 28/298 (9%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG- 77 G + ++ Q G+ + + G ++I + PSV I + Sbjct: 23 GMVIAVKSVSPDRIKKMLTAQVQSATGRALTIAGPLEIRLGLEPSVVASGITLSNPPGST 82 Query: 78 -SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH- 135 K+E PLL+ +I + + ++ P + +KG N Sbjct: 83 RPEMVKMERFEFEMALRPLLNRQIVINRLLLNAPDIVIETEAKGPGNLDFSPPDQQGRPA 142 Query: 136 ---------------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 +V L ++ + G I + D+ + + L + + P Sbjct: 143 PPAATEQQEGAGASFSVTLREVKISNGVIALHDRTAKTTETVRIHELTLKPDTAD---PA 199 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 + + E + + + + L ID L Sbjct: 200 LLALQLLTTAREQKIDLAGTMGDINAILSGAPWPLKLKAAAKAIALNVEGRIDKLAALQG 259 Query: 241 NEKQPIYSGV-----FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 + G AG L + ++ + G +S LQ+ Sbjct: 260 LNFKLTAQGEELGEVLRAAGVSLPE--LPQTLGPFTVTARVDNAGGRFNLSDLDLQAG 315 >gi|150024503|ref|YP_001295329.1| hypothetical protein FP0400 [Flavobacterium psychrophilum JIP02/86] gi|149771044|emb|CAL42511.1| Putative outer membrane protein [Flavobacterium psychrophilum JIP02/86] Length = 860 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 113/381 (29%), Gaps = 34/381 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58 M +++ IG+G +++ +P+F + E+ V K+ + + Sbjct: 1 MKKKIFIGIGVFLLIIIASLAAIPIFF-KDQIKAKIEKSINENVDAKVTFA-DASLSLFK 58 Query: 59 -LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE---IRVFDMYIDQPHL 112 P +V + + I K G E L+++ L +GE + + + + Sbjct: 59 NFPQANVGIQKLIIINKAPFAGDTLVAFEELNLQMSVKELFNGENQPMTLKAISVKNGKA 118 Query: 113 NFYLSSKGVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 N + G+ N+ ++ + + ++ ++ K D+ S +++LN Sbjct: 119 NILFNKDGIGNFDIAIKDNNKEESKSKPFAMNIQNYALENFNFKYYDERSKIKMVINELN 178 Query: 167 LQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 + F I L S S+ + N + + + K Sbjct: 179 HTGTGNFAAQILDLDTKSTAKISLDMDKMNYMKNVAISLDAVLGIDLEKSKYTFK-DNTA 237 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL------LNLELSAKKSRLSGNFKIS 279 + + G + E Y F K + +G+F ++ Sbjct: 238 KINELPLQFNGFIQLLEDGQDYDLTFKTPTSSFKNFLGLVPAAYAGDLNTVKTTGDFTVA 297 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD---LNETDFFEE 336 + +I + N + + + D +NET + Sbjct: 298 G--FAKGKLTNATIPKFNIAIASNNASFQYPDLPK-----SVQNIIIDTKIINETGLMND 350 Query: 337 EEKKNKNDDLKKDDIQYSVNK 357 K D ++ Sbjct: 351 TYVNLDKLSFKIDQDVFTAKA 371 >gi|466662|gb|AAB18501.1| unnamed protein product [Escherichia coli str. K-12 substr. MG1655] Length = 183 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 59/163 (36%), Gaps = 18/163 (11%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 11 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 71 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130 Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII 152 P S+ +NW + D + + GR I Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKD----ANANRRHGRFGWI 169 >gi|115373227|ref|ZP_01460528.1| AsmA family [Stigmatella aurantiaca DW4/3-1] gi|310817519|ref|YP_003949877.1| AsmA family protein [Stigmatella aurantiaca DW4/3-1] gi|115369828|gb|EAU68762.1| AsmA family [Stigmatella aurantiaca DW4/3-1] gi|309390591|gb|ADO68050.1| AsmA family protein [Stigmatella aurantiaca DW4/3-1] Length = 900 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 111/346 (32%), Gaps = 45/346 (13%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQA--TLIVGKKIAVKGGIKIHILP 60 RR LG +F+V+++G V +D ++ + A + +G+ I + G I + P Sbjct: 7 RRWPYVLGGIFAVLVLGVAIVLWRLDAILLQQARAQAATFSQQLGRPIQI-GDISTKLFP 65 Query: 61 FPSVFFKDIRIDQKEDGS-FESKIEGLSMRAEFLPLLS---GEIRVFDMYIDQPHLNFYL 116 V +++ + E ++++ L +R +PLL +I+V + + +N Sbjct: 66 HIGVDVENVSVGAAEGEDLPLAEVKALDVRVAAMPLLRSSGKDIQVLNAEVTGLTVNVIR 125 Query: 117 SSKGVSNW-----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159 G +N + + V +++ + G I+ +D+ + Sbjct: 126 LPDGTTNVQRLQERLASQQKPEEEAPPENTPPTDLSGVRVDRAALTDGTIRFVDRSGAKA 185 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-------------DNKRSAFKI 206 L+ +L I + L + PL + + + +R + K Sbjct: 186 QELAVSDLDIEVKDLRVGQPLEVKLAAAVLAQKQNLFVTLSASPLPPTLVPTPERLSLKA 245 Query: 207 TANFPAKNKA-ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 A A + + + ++ K E Sbjct: 246 EAIDLAPLGPFLPPSVGFQAGTLTADWKAELGAAIPGGKGPTRLEGAIRALGLKFAGAEG 305 Query: 266 SAKK---SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308 ++ G++ + R+KL D K +V Sbjct: 306 GKALDVVLDTDVKADLAAGDLALDRFKLDFGPAG----IDGKGRVK 347 >gi|326793901|ref|YP_004311721.1| AsmA family protein [Marinomonas mediterranea MMB-1] gi|326544665|gb|ADZ89885.1| AsmA family protein [Marinomonas mediterranea MMB-1] Length = 788 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 58/383 (15%), Positives = 116/383 (30%), Gaps = 51/383 (13%) Query: 18 VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG 77 G V +F+D DF+++ A + + G I P+ V DI + + Sbjct: 20 GGIGYVLIFVDPNDFKKELISLADKHANIDLKIDGDISWSFFPWLGVELNDIGVA-AKGE 78 Query: 78 SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM---- 133 S +K E R LPLL +I V + + + + +G NW T Sbjct: 79 STLAKFEEAEFRLAVLPLLQQKIEVDTVRLIGLKADLVMDEEGNGNWQLGSKTDSQKQAS 138 Query: 134 ----------------------------------IHNVILEKIHVKGGRIKIIDQESDQV 159 I ++ +EKI + +++ +D++ Sbjct: 139 NQSSIASSTASMPSETDAVTPNAAKAAQTSSAYTIPDINIEKIELVDAQVRFVDKQRGMD 198 Query: 160 YFLSDLNLQISARFLNIISPLSID-SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218 L+ N +S PL D ++G + E G + + A+ + Sbjct: 199 L-LAMFNTNLSNVRWGEAWPLEFDIKLEGILPKEANGEQQSIGHTMSLGADLTVFPEHQR 257 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278 L + + + I + + + L L + K+ Sbjct: 258 LALSDLIVKTRTEAAMLPISPLLANAQIRQLELDLPQENLIIDGLSLDSLGVSFESQIKV 317 Query: 279 SDGNVRISRYKLQSILPN-SSTDEDNKTKVSQDE--------ENLLNFSENGAESMHDLN 329 + + ++ L + + S + NK + E L S G + + Sbjct: 318 FEL-LSKPQFSLAANVTEFSPRELLNKLALPLPEMADETTLSALQLTLSLEGDANAVKVQ 376 Query: 330 ETDFFEEEEKKNKNDDLKKDDIQ 352 +E + N +K + Sbjct: 377 PISIRLDETQLEANASVKFTPLS 399 >gi|49473944|ref|YP_031986.1| hypothetical protein BQ02970 [Bartonella quintana str. Toulouse] gi|49239447|emb|CAF25797.1| hypothetical protein BQ02970 [Bartonella quintana str. Toulouse] Length = 626 Score = 94.2 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 46/383 (12%), Positives = 110/383 (28%), Gaps = 60/383 (15%) Query: 1 MLRRVLIGLGFLFSVVL----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 M R++ L +F ++ +P + R + + G + ++ ++ Sbjct: 1 MRARIIKFLSGIFITIVFLFGASILILPSLVSTDAIRIRLAQDLSAWTGYNVQLRDPPRL 60 Query: 57 HILPFPSVFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 ++ P+P F + + K + + E + + + LL G + + I +P Sbjct: 61 NLFPYPRAFLFGVTLTSKMNNAVPLMEAESIEVDLSLVDLLWGHVSFSETRIVRPQFVME 120 Query: 116 LSSKGVSNWFQRKSTMDMIHNVIL------------------------EKIHVKGGRIKI 151 K V+++F R S + + +I +K G + Sbjct: 121 KPVKTVADFFTRFSQSQGALGLAIRNAREIIKHNPDQPDIKRLLNQPFGRIVIKNGVLVY 180 Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP 211 D S ++ LN + + + + + I A+ Sbjct: 181 HDSLSSVAEKITGLNAALDWPEATQEA-----------RFRADARWRGELTKLSIDADQA 229 Query: 212 ---AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268 +K + + I L + I+ G S+ + Sbjct: 230 LLLLAGGKSQIKASINSVRGGITFTGQAQLS---EYYIFDGKVSMRSPEWNQTLAWIGGS 286 Query: 269 K---------SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE-ENLLNFS 318 + +F +++++ ++ + ++ S Sbjct: 287 QFWGHGLKIPIVWESHFLAQPMHIKMNNVTFTMGTS----RARGALELDFQDYVPIVIGS 342 Query: 319 ENGAESMHDLNETDFFEEEEKKN 341 +L+E F EEKK Sbjct: 343 LAFDNLDFNLSELVFSLVEEKKA 365 >gi|319782143|ref|YP_004141619.1| AsmA family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168031|gb|ADV11569.1| AsmA family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 617 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 43/340 (12%), Positives = 102/340 (30%), Gaps = 35/340 (10%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M+RR + +G VV + +PL R+ + + G ++A+ G +I + P Sbjct: 5 MIRRGIWAIGAAVIVVALVVAALPLIASTRIVRDRIAWEMSAWSGFRVAIDGSPRIEVWP 64 Query: 61 FPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 D+ + Q D + E + + + L G++ + +P + + Sbjct: 65 TFRAILTDVTLSQWTDTEAPPVVEAERVEVDLSAMAALRGDVAFSTARLVRPTIRVQRTP 124 Query: 119 KGVSNWFQRKST-------------MDMIHNVILEKI-HVKGGRIKIIDQESDQVYFLSD 164 G+ L+K+ G ++ D D Sbjct: 125 AGLFLPAVPTGGRITRSIDTARGLVNADPAKPDLDKLPTDTFGTVEFRDGRMVASIGGKD 184 Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQL 223 + + ++ + ++ + TG + + A + + P + + L Sbjct: 185 VEI-----LSSLNGQANWAAMNSNATLSATGIWRGESVALDVASAKPLVLFAGGTAPLTL 239 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK--------LLNLELSAKKSRLSGN 275 A P G +E + G + + + + +S Sbjct: 240 SFKAAPATFSFDGTASMSENT-YFDGQAKFSAPSLRRVLEWSQAGIAPGAAIGSVSISSK 298 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315 + G V+ +I +++ +S E + Sbjct: 299 ITATGGRVKFDN---TAIALDNNPGM-GALDLSLGEAQPV 334 >gi|256820936|ref|YP_003142215.1| hypothetical protein Coch_2110 [Capnocytophaga ochracea DSM 7271] gi|256582519|gb|ACU93654.1| conserved hypothetical protein [Capnocytophaga ochracea DSM 7271] Length = 892 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 48/385 (12%), Positives = 111/385 (28%), Gaps = 28/385 (7%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58 + +++L G ++++ +P F +E A + I ++ + I + Sbjct: 3 IAKKILKWGGITLLLLIIAMIAIPFFF-KDTIKEKVIEMANENLKANIGLQ-DVDISLFK 60 Query: 59 -LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 P V D + KE G + + + LL+G + + + + Sbjct: 61 NFPKARVTLNDFVLVNKEPFVGDTLFAAKHIDVTLSIKDLLAGNYNLLGANVKDASVYIH 120 Query: 116 LSSKGVSNWF-----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 L+ +G N+ + + +++ +V+ + + + ++D+ Sbjct: 121 LNKEGEGNYDIAIPSDKPEEESAPIKLDIQRYNVENLKFTFKMDDGNLFMEVADIYHSGK 180 Query: 171 ARFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 F + L + + + + KN+ + K Q Sbjct: 181 GNFAEEVLDLDTQTKANLTFAMGKSTFMKRVPITLQAILGIDLKNQKYTFK-QNKATVNR 239 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNL-----ELSAKKSRLSGNFKISDGNV 283 + + G + E+ Y FS F L L S + + +GN + Sbjct: 240 LDLVFDGFIQLLEEGQHYDLTFSTPTNSFQNFLALIPEEYSKSIENVKTTGNLTL--KGF 297 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343 I + + + L + +N + K N N Sbjct: 298 AKGDMVGDKIPT---FGLEMYADNASFKYPNLPKTVRDITIDLKVNNATGITNDTKVNLN 354 Query: 344 D---DLKKDDIQYSVNKKEEKDNSH 365 + +D N N Sbjct: 355 KFTMSIDQDHFSARANVSNVVVNPF 379 >gi|315224136|ref|ZP_07865976.1| AsmA family protein [Capnocytophaga ochracea F0287] gi|314945869|gb|EFS97878.1| AsmA family protein [Capnocytophaga ochracea F0287] Length = 892 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 48/385 (12%), Positives = 111/385 (28%), Gaps = 28/385 (7%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58 + +++L G ++++ +P F +E A + I ++ + I + Sbjct: 3 IAKKILKWGGITLLLLIIAMIAIPFFF-KDTIKEKVIEMANENLKANIGLQ-DVDISLFK 60 Query: 59 -LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 P V D + KE G + + + LL+G + + + + Sbjct: 61 NFPKARVTLNDFVLVNKEPFVGDTLFAAKHIDVTLSIKDLLAGNYNLLGANVKDASVYIH 120 Query: 116 LSSKGVSNWF-----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 L+ +G N+ + + +++ +V+ + + + ++D+ Sbjct: 121 LNKEGEGNYDIAIPSDKPEEESAPIKLDIQRYNVENLKFTFKMDDGNLFMEVADIYHSGK 180 Query: 171 ARFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 F + L + + + + KN+ + K Q Sbjct: 181 GNFAEEVLDLDTQTKANLTFAMGKSTFMKRVPITLQAILGIDLKNQKYTFK-QNKATVNR 239 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNL-----ELSAKKSRLSGNFKISDGNV 283 + + G + E+ Y FS F L L S + + +GN + Sbjct: 240 LDLVFDGFIQLLEEGQHYDLTFSTPTNSFQNFLALIPEEYSKSIENVKTTGNLTL--KGF 297 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343 I + + + L + +N + K N N Sbjct: 298 AKGDMVGDKIPT---FGLEMYADNASFKYPNLPKTVRDITIDLKVNNATGITNDTKVNLN 354 Query: 344 D---DLKKDDIQYSVNKKEEKDNSH 365 + +D N N Sbjct: 355 KFTMSIDQDHFSARANVSNVVVNPF 379 >gi|309378224|emb|CBX23138.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 700 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 49/382 (12%), Positives = 112/382 (29%), Gaps = 32/382 (8%) Query: 4 RVLIGLGFLFSVVLVGAFT---VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 R+ + L ++L V + R ++ +KI+ I +LP Sbjct: 11 RLKYAVAVLTMLLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIGRRLLP 69 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 P+V K++ I + ++ + + L S +I++ + L KG Sbjct: 70 RPTVILKNLTITEPGSNRTAVSVKETKIGLGWKNLWSDQIQIEKWVVSGAELALTRDGKG 129 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 V N + +I ++ +++ + +LNLQ Sbjct: 130 VWNIQDLIDNPKRKA--SVNRIIIENSTVRLDLPQDRLTLKEVNLNLQSPDSAGQQ---- 183 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 +S V + + + ++ P + + + + I + G+ Sbjct: 184 -FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEAETALNGHRIAVSTTGSPTI 241 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVR-ISR 287 + NL L+A+ L +G F + N + Sbjct: 242 RFNAGGADAADLALRADTAFHNLHLTAQIPALALRNNGIKIETANGTFTAAGENSQWGGS 301 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347 +KL + ++S N ++ L + + + L Sbjct: 302 FKLDRADLHPGISNIGNAEISG------NVKTPRLQTNFSLGSPLVWSRDNG-LEVPRLH 354 Query: 348 KDDIQYSVNKKEEKDNSHDKEN 369 +Q +VN+ + + Sbjct: 355 ISTLQDTVNRLPQPRFISRLDG 376 >gi|317152641|ref|YP_004120689.1| hypothetical protein Daes_0926 [Desulfovibrio aespoeensis Aspo-2] gi|316942892|gb|ADU61943.1| hypothetical protein Daes_0926 [Desulfovibrio aespoeensis Aspo-2] Length = 1231 Score = 93.8 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 40/295 (13%), Positives = 80/295 (27%), Gaps = 17/295 (5%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFK 67 + F + L V + R Q+ + + + + + P + Sbjct: 18 VAFWLIIALAAYVLVGFLLVPPALRSIIVSQSQSALKRTVHLG---SVSFNPLTLRLALH 74 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ- 126 D R D E LS+R + V + + ++ G + Sbjct: 75 DFRADALEGEVPLMSFGELSLRPGVASVWRMAPVVSSLALRDLTVDIVFFGDGRYSISDL 134 Query: 127 -------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 L + + I D+ + + +S++NL I Sbjct: 135 LDSDGEQADQPPGQFLPFALSEFEMSNATIVFDDRSKAKRHVVSEINLSIPFTSSFEGLR 194 Query: 180 LSIDSIKGSVIAEGT-GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG-N 237 + S + G + F T A+++ + +P + DL Sbjct: 195 KEFTQPEFSAVVNGDPVKLKGRTLPFDDTLLTEFSLGAVNVDLD---QYWPYLSDLIPLT 251 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 L + S F + D L L + L G + ++R Q Sbjct: 252 LVKGQLSSEISINFERSDDQRLKLFLSGGGALNGLELTSPQDGGVLSVNRIAFQM 306 Score = 56.8 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 31/288 (10%), Positives = 78/288 (27%), Gaps = 15/288 (5%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEG 85 I T + + ++ + ++ + + + +DG + Sbjct: 247 LIPLTLVKGQLSSEISINFER----SDDQRLKLFLSGGGALNGLELTSPQDGG-VLSVNR 301 Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVK 145 ++ + E L + + + +DQP + G NW ++ Sbjct: 302 IAFQMERFSLGDSLLHLRQVTVDQPRVKLIRRPGGEFNWAGYFTSTQDGAGPDEAGQAGA 361 Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK 205 L + + + V A TG R+ Sbjct: 362 EQS-----ASPSLRVDLGSVEVTSGSVEWIDQDVPGGFERTYPVTARATGLSTGSRTPGT 416 Query: 206 ITANFPAKNKAISLKIQLFPLAYPIIIDL-----FGNLFWNEKQPIYSGVFSVAGDFSKL 260 +A+ + N ++I P ++ L + ++A + + Sbjct: 417 FSASLGSANGGGVIEISGQCRLDPALVTATLTASDLTLAEYSPYFATALPLTLASGSAGI 476 Query: 261 LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308 + + S + DG++ +S +L + + VS Sbjct: 477 SATLAVEQTTNKSMAVSVKDGSLTLSDLRLHKPAAGEPSVLAGQLAVS 524 Score = 44.1 bits (102), Expect = 0.040, Method: Composition-based stats. Identities = 31/258 (12%), Positives = 68/258 (26%), Gaps = 4/258 (1%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68 L + L G P+ F + Q + G +H + + Sbjct: 669 LVGTAQIALRGLGLAPVNTYLARFADLELAQGAASADLTLTFDGNDTLHFVLEGDSALAN 728 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128 R+ G + I+ L + L +RV + +D P G +N + Sbjct: 729 ARLMDTLAGDELAGIDALRLSKIRLENEPYRLRVDTVRLDDPRAVLRFEQDGRTNIQRTL 788 Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188 + G D + +Q F + + + G Sbjct: 789 RVPPPEPTDRAAG-NRSPGPGAATDAANATPPLADTPLVQDEPPFFESLEIGRVTTENGQ 847 Query: 189 VIA---EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 + T + + + ++T ++ + + P + + G L Sbjct: 848 IRFHDASVTPPYSTEMADIRLTLTNISQAPDAQPGLDMQASIGPTPLSVTGTLNPLAVPI 907 Query: 246 IYSGVFSVAGDFSKLLNL 263 ++ G L+ Sbjct: 908 GSDLAVTLTGLDLASLSP 925 >gi|261399952|ref|ZP_05986077.1| AsmA family protein [Neisseria lactamica ATCC 23970] gi|269210405|gb|EEZ76860.1| AsmA family protein [Neisseria lactamica ATCC 23970] Length = 700 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 46/379 (12%), Positives = 105/379 (27%), Gaps = 26/379 (6%) Query: 4 RVLIGLGFLFSVVLVGAFT---VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 R+ + L ++L V + R ++ +KI+ I +LP Sbjct: 11 RLKYAVAVLTMLLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIGRRLLP 69 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 P+V K++ I + ++ + + L S I++ + L KG Sbjct: 70 RPTVILKNLTITEPGSNRTAVSVKETKIGLGWKNLWSDRIQIEKWVVSGAELALTRDGKG 129 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 V N + +I ++ +++ + LNLQ Sbjct: 130 VWNIQDLIDNPKRKA--SVNRIIIENSTVRLDLPQDRLTLKEVSLNLQSPDSAGQQ---- 183 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 +S V + + + ++ P + + + + I + G+ Sbjct: 184 -FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEAETALNGHRIAVSTTGSPTI 241 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 + NL L+A+ L + + ++I ++ Sbjct: 242 RFNAGGADAADLALRADTAFHNLHLTAQIPAL----ALRNNGIKIETANGTFTAAGENSQ 297 Query: 301 EDNKTKVS-------QDEENLLNFSENGAESMHDLN---ETDFFEEEEKKNKNDDLKKDD 350 K+ S N N + + + L Sbjct: 298 WGGSFKLDRADLHPGIGNIGNAEISGNVKTPRLQTNFSLGSPLVWSRDNGLEAPRLHIST 357 Query: 351 IQYSVNKKEEKDNSHDKEN 369 +Q +VN+ + + Sbjct: 358 LQDTVNRLPQPRFISRLDG 376 >gi|307308414|ref|ZP_07588118.1| AsmA family protein [Sinorhizobium meliloti BL225C] gi|306901017|gb|EFN31625.1| AsmA family protein [Sinorhizobium meliloti BL225C] Length = 608 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 41/333 (12%), Positives = 95/333 (28%), Gaps = 27/333 (8%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS-FESKIEG 85 + T+ R ER G K + G ++ P P V I ++I Sbjct: 45 VSTTEARATMERMLDDWSGGKSTISGEPEVRFWPEPLVTLPATTIVSTGPEPLRLAEIGR 104 Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-----QRKSTMDMIHNVILE 140 ++ L L GE + ++ + P + + G NW Sbjct: 105 ITASFSLLSALRGEQALEEITLVDPVITLERGADGAVNWQKPDWLVPPGNAMPRDEAPFG 164 Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200 I ++ GR +++D+ + I L S G + A+ + Sbjct: 165 DITIENGRFRVVDRLAAT---------GEGVDVAGISGTLKWPSFGGRLSAQFAAVIGGE 215 Query: 201 RSAFKITANFPAKNKAIS-LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259 + P A ++ + P+ G ++ + P SG ++ Sbjct: 216 AVGWAFVCEEPLALFARRNAALKTSLTSAPLTFSFEGTGNFSSQ-PFASGHLQMSAPSLA 274 Query: 260 LL--------NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE 311 L + EL + + +++ +L ++ D ++ + Sbjct: 275 ALAAWYRGAPDAELPPGGFSIDTRVTTGETALKLEELQLAIGEATATGVLD--VQLPSGK 332 Query: 312 ENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344 + + + + + ++ Sbjct: 333 GPRVEGTLAFDRIDLNGLPLATLKPAQGDDRGW 365 >gi|294668240|ref|ZP_06733347.1| AsmA family protein [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309948|gb|EFE51191.1| AsmA family protein [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 689 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 49/365 (13%), Positives = 112/365 (30%), Gaps = 19/365 (5%) Query: 4 RVLIGLGFLFSVVLVG-AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 + L+G L ++ + + R A G+KI + I ++P P Sbjct: 12 KCLVGGAVLSALAFGAQYALLSWLFSSENVR-RAADGAVAGTGRKIRYRPEINTSVIPRP 70 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 +V K + I S E IE + + + L G V +P L S G Sbjct: 71 TVTLKQVEITHPGGASAEISIEEMRVGLSWASLF-GTPSVEKWVFVRPELMLNRSQDGGW 129 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 N + ++++ V+ G + + D + L ++NL+I+ + + + Sbjct: 130 NIRDLLQKEGSLP---VDRLIVEDGHLLLD--TGDSSHTLENINLKINGADESQTTVKAE 184 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG---NLF 239 +K + AE + + +A ++ + + A+S + +I G Sbjct: 185 GRLKTPLWAE-EAEWKFEGTAARLADGWLMPDLALSGRSNYKGDETNFLIGGNGSWRTGG 243 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 + ++ A ++++S + + + + Sbjct: 244 IQLNNARLKIDIPARNLHLNAESPQIKAGETQISAAAANAVLTAQYGGAQWDGTIAAKRL 303 Query: 300 DED----NKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV 355 K+S + ++ LN + + L + Sbjct: 304 TLHPTVAAVEKLSINGSRKTALTQTAFTLDTPLNWQ---RQGGWEMPAAKLTTRLDNITG 360 Query: 356 NKKEE 360 N + Sbjct: 361 NPRPR 365 >gi|332996914|gb|EGK16533.1| hypothetical protein SFK272_4793 [Shigella flexneri K-272] gi|333013400|gb|EGK32772.1| hypothetical protein SFK227_4729 [Shigella flexneri K-227] Length = 178 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 58/166 (34%), Gaps = 22/166 (13%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 ++ + F +++V A + DW + ++ + + + A++G + + Sbjct: 6 KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65 Query: 57 -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 +P+P V +DI + D + + L LL+ + + + +++ Sbjct: 66 ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125 Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGG 147 P S+ +NW + + L+ I G Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQG 171 >gi|15964471|ref|NP_384824.1| hypothetical protein SMc00838 [Sinorhizobium meliloti 1021] gi|15073648|emb|CAC45290.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021] Length = 604 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 41/333 (12%), Positives = 95/333 (28%), Gaps = 27/333 (8%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS-FESKIEG 85 + T+ R ER G K + G ++ P P V I ++I Sbjct: 41 VSTTEARATMERMLDDWSGGKSTISGEPEVRFWPEPLVTLPATTIVSTGPEPLRLAEIGR 100 Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-----QRKSTMDMIHNVILE 140 ++ L L GE + ++ + P + + G NW Sbjct: 101 ITASFSLLSALRGEQALEEITLVDPVITLERGADGAVNWQKPDWLVPPGNAMPRDEAPFG 160 Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200 I ++ GR +++D+ + I L S G + A+ + Sbjct: 161 DITIENGRFRVVDRLAAT---------GEGVDVAGISGTLKWPSFGGRLSAQFAAVIGGE 211 Query: 201 RSAFKITANFPAKNKAIS-LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259 + P A ++ + P+ G ++ + P SG ++ Sbjct: 212 AVGWAFVCEEPLALFARRNAALKTSLTSAPLTFSFEGTGNFSSQ-PFASGHLQMSAPSLA 270 Query: 260 LL--------NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE 311 L + EL + + +++ +L ++ D ++ + Sbjct: 271 ALAAWYRGAPDAELPPGGFSIDTRVTTGETALKLEELQLAIGEATATGVLD--VQLPSGK 328 Query: 312 ENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344 + + + + + ++ Sbjct: 329 GPRVEGTLAFDRIDLNGLPLATLKPAQGDDRGW 361 >gi|237749197|ref|ZP_04579677.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229380559|gb|EEO30650.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 1359 Score = 93.4 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 47/368 (12%), Positives = 109/368 (29%), Gaps = 31/368 (8%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-PFPSVFFKDIRIDQKEDGS 78 +P +++ + E+ A+ +GK + I P V +++ + + G Sbjct: 60 YVVLPHV---NEYKTEIEKLASESIGKNVRFS-KITASWYGLQPKVDLENVTLSD-DRGK 114 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS-------NWFQRKSTM 131 +++ +S + + ++R+ + +D+P +N G + ++ + Sbjct: 115 EYVRLKNVSAVVSWWSVPLMDLRLASLVVDKPDINISRDRDGRFYVAGILVDPEKQTESG 174 Query: 132 DMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNIISPL-SIDSIKGSV 189 + +I V+ G I D L N + R L ++ + Sbjct: 175 VADWILKQHEIIVRDGAIHWKDDFRHAAELNLDQFNFAMKNRGRKHRFRLTAVPDAHIAD 234 Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 + GN + R K++ K L + +DL L Sbjct: 235 SIDIRGNLSHPRFEKKVSDVSKWKGDLYVALPNLNADQWKKYVDLPVELDGGTGSIQVWA 294 Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + L+L K RL + + D R+ ++ + + + Sbjct: 295 GVDKSRLTEISAELDLKNLKLRLRKDLPVLDLAFATGRFDMKRL-------VNAGAEDDL 347 Query: 310 DEENLLNFSENGAESMH----DLNETDFF-----EEEEKKNKNDDLKKDDIQYSVNKKEE 360 ++ + LN+ F E + + + + Sbjct: 348 QAHPFYSYGVDKLSLKTVLGKVLNDASFTASYLSPEGDNQLAKTKVDVKRLNLGELGNFL 407 Query: 361 KDNSHDKE 368 DKE Sbjct: 408 PYLPLDKE 415 >gi|297184459|gb|ADI20574.1| hypothetical protein [uncultured alpha proteobacterium EB080_L84F03] Length = 183 Score = 93.4 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 63/182 (34%), Gaps = 15/182 (8%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 R LI L + V + A L + Q + G+ + + I++ P Sbjct: 2 RFLIRLIVIVLVAVAIAIVGLLMLPGEKIARIAADQLSKQTGRAVDISSETSINLYPTLG 61 Query: 64 VFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 V I + + L++ + L+ G IR+ + P + ++ G Sbjct: 62 VTTGPASIASADWAKNGPLMTADSLAIGIDVPALIGGTIRITKLEAKSPRIVLERAADGR 121 Query: 122 SNWFQRKST-------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 +NW S D +++ LE+ + ++ ID + L ++++ Sbjct: 122 TNWDLLPSREPVETTEPVNETTEDQSYDLSLERALITDAGLRYIDHGTGTDQDLKNVDID 181 Query: 169 IS 170 + Sbjct: 182 LR 183 >gi|86748018|ref|YP_484514.1| AsmA [Rhodopseudomonas palustris HaA2] gi|86571046|gb|ABD05603.1| AsmA [Rhodopseudomonas palustris HaA2] Length = 655 Score = 93.4 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 103/313 (32%), Gaps = 33/313 (10%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ESKIE 84 I + + G ++A+ G KI + P SV D+ + D + I Sbjct: 26 IPSGAVTSAIQSRIERDTGYRLAIGGASKISLFPGFSVTLNDVTLQDPNDRNPDSRFTIG 85 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN---VILEK 141 + ++SG+ RV ++ + +P L L + S ++++ Sbjct: 86 RVRAELPLGSVISGKPRVTELTLTKPELRVPLIRERAPTASSPPSPAIRNGRQIDTVIDR 145 Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201 + V+ G + + + + +N +I+ +S + G K Sbjct: 146 VIVEDGVVVMANAADRVEDRIERINAEITIDAERRVSAV------------GGAQLGGKP 193 Query: 202 SAFKITANFPAKNKA---ISLKIQL-----FPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253 + F I A+ PA + + LK++ PLA + L G L G Sbjct: 194 ATFDIKASPPAADAQPVPVELKLEAPDLLRAPLAAKAEVRLRGALLQINGLSGTLGD--- 250 Query: 254 AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313 G F+ + +L A K RL + + + + + P + D + +S Sbjct: 251 -GAFNGWASADL-AGKPRL--KLDLDFQRLDLGHPRTPAQPPGAPWS-DARIDLSGLNYV 305 Query: 314 LLNFSENGAESMH 326 + Sbjct: 306 DAELRLSANALNL 318 >gi|95930610|ref|ZP_01313344.1| protein of unknown function DUF748 [Desulfuromonas acetoxidans DSM 684] gi|95133262|gb|EAT14927.1| protein of unknown function DUF748 [Desulfuromonas acetoxidans DSM 684] Length = 1191 Score = 93.4 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 40/329 (12%), Positives = 96/329 (29%), Gaps = 42/329 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R LI + + ++L+ VP ++ + + ++ K + PF Sbjct: 5 MKRSLITVAVIVGLLLLSMLVVPW-----QVKKQGTAWIAENTERTLTIE---KAYFNPF 56 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + + + + L + ++ + + + ID P++ L + Sbjct: 57 TLKLELSGVTLTEPASDQPFVSWDRLMVAVSLRSIIDQALILRRIEIDHPYVKIDLLGEQ 116 Query: 121 VSNWFQRKSTMDM--------------IHNVILEKIHVKGGRIKIIDQESDQV--YFLSD 164 N+ D I + G I DQ S Q + + Sbjct: 117 QFNFSDFMHLGDDAPPPVEPVPEEESGPFLFSFNNIVISDGEIDFNDQASPQSSHHEIRQ 176 Query: 165 LNLQIS-----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 L L + + + + G ++ + + N ++ Sbjct: 177 LALSVPVIGNVEYLADEYVTPELAMLLNGADIHAEGQSKPFDNSLETNLSLAFFNTDLAF 236 Query: 220 KIQLFPLAYPII-----IDLFGNL-----FWNEKQPIYSGVFSVAGDFSKLLNLELSAKK 269 Q P+A P+ +D NL + + +G F+++ + + Sbjct: 237 YAQNAPVALPVDVQSGILDCEINLTYLVTKDELPKLLVNGDFALSELVVNEPDGKPLFAM 296 Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSS 298 L + +V + L I Sbjct: 297 PTLL--LDVEQADVFKQDFTLSLIALFEP 323 >gi|307318977|ref|ZP_07598408.1| AsmA family protein [Sinorhizobium meliloti AK83] gi|306895391|gb|EFN26146.1| AsmA family protein [Sinorhizobium meliloti AK83] Length = 608 Score = 92.6 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 41/333 (12%), Positives = 95/333 (28%), Gaps = 27/333 (8%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS-FESKIEG 85 + T+ R ER G K + G ++ P P V I ++I Sbjct: 45 VSTTEARATMERMLDDWSGGKSTISGEPEVRFWPEPLVTLPATTIVSTGPEPRRLAEIGR 104 Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-----QRKSTMDMIHNVILE 140 ++ L L GE + ++ + P + + G NW Sbjct: 105 ITASFSLLSALRGEQALEEITLVDPVITLERGANGAVNWQKPDWLVPPGNAMPRDEAPFG 164 Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200 I ++ GR +++D+ + I L S G + A+ + Sbjct: 165 DITIENGRFRVVDRLAAT---------GEGVDVAGISGTLKWPSFGGRLSAQFAAVIGGE 215 Query: 201 RSAFKITANFPAKNKAIS-LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259 + P A ++ + P+ G ++ + P SG ++ Sbjct: 216 AVGWAFVCEEPLALFARRNAALKTSLTSAPLTFSFEGTGNFSSQ-PFASGHLQMSAPSLA 274 Query: 260 LL--------NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE 311 L + EL + + +++ +L ++ D ++ + Sbjct: 275 ALAAWYRGSPDAELPPGGFSIDTRVTTGETALKLEELQLAIGEATATGVLD--VQLPSGK 332 Query: 312 ENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344 + + + + + ++ Sbjct: 333 GPRVEGTLAFDRIDLNGLPLATLKPAQGDDRGW 365 >gi|158520972|ref|YP_001528842.1| hypothetical protein Dole_0955 [Desulfococcus oleovorans Hxd3] gi|158509798|gb|ABW66765.1| protein of unknown function DUF748 [Desulfococcus oleovorans Hxd3] Length = 1040 Score = 92.6 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 98/326 (30%), Gaps = 33/326 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-F 61 +R+L+ G F+V F F+ + +G+ +AV+ KI P Sbjct: 6 KRILVIAGICFAV----YFIAIFFVASAVLTRMAPEKLAEFLGRPVAVE---KIRANPLT 58 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 SV + I K + E L + AE L+ + + + +++P ++ S Sbjct: 59 LSVTVYGLEIKDKNKTDPFVRFEKLYVNAEAWSLIRRGLVLKRVLLEKPEIHVARLSGAT 118 Query: 122 SNWFQR------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 N+ + + + I V G + D + + +S +N Q+ Sbjct: 119 FNFSDLLAGEKEEENPAEEKSPAEPFGFAVANISVVDGTVVYRDLPFGKTHTISPINWQV 178 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 I + T + D + + + + + L ++ P Sbjct: 179 P------FISNFIRHRNRKLEPALTLSVDGATLSVDVQTKPFKNSMETVVDMALSGVSIP 232 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN-----LELSAKKSRLSGNFKISDGNVR 284 + + F K + ++ A L + DG Sbjct: 233 RYTAYMPKDRIGFQVEQGDVDITTQISFYKENDRSVVTVQGQAAIVDLDVKDREGDGLFT 292 Query: 285 ISRYKLQSILP--NSSTDEDNKTKVS 308 + R + + S + +V Sbjct: 293 LPRLAVTVLPSVVTESRLHVGEVQVQ 318 >gi|260219866|emb|CBA26826.1| hypothetical protein Csp_G38580 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 625 Score = 92.6 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 38/323 (11%), Positives = 99/323 (30%), Gaps = 30/323 (9%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGL 86 D + + R + + + G ++ + P + + + ++ + + ++ Sbjct: 2 FDGDKIKAEISRTVLEQKQRTLVIAGKPQLSVWPDVGIQLDGVTLSERGSSTEFAALKSA 61 Query: 87 SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-------------KSTMDM 133 M +PLLS +++V + + G N + Sbjct: 62 RMSVAVMPLLSKQVQVRALDVTGLKATLIKRKDGSLNIADLLGDPSAQPAPANVPAQPAE 121 Query: 134 IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193 + + I + ++ D++ +++L+L + + + + K S+ +G Sbjct: 122 PLKIDVAAIRIADAQLTWRDEQVGSTTNINNLSLSTGHVQADTGAKTA-NIEKLSLAIKG 180 Query: 194 TGNFDNKRSAFKIT--ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI----- 246 D A A PA++ ++ + L L E Sbjct: 181 QAGADGFSLALDAPKLALSPARSSGEAVTLSAGVQGSGRSALLKLVLSGVEGNVDAIRIS 240 Query: 247 -YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 +G +A + L L L+G+ +++ + ++ K Sbjct: 241 KLTGSLDLAHPDMPMKQLSLP-----LNGSLQVNLAQQSAALALATKF---DESNIATKL 292 Query: 306 KVSQDEENLLNFSENGAESMHDL 328 V++ L F + + D Sbjct: 293 NVARFAPLSLGFDLDIDQLNVDK 315 >gi|134096170|ref|YP_001101245.1| hypothetical protein HEAR3014 [Herminiimonas arsenicoxydans] gi|133740073|emb|CAL63124.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 1112 Score = 92.6 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 101/343 (29%), Gaps = 45/343 (13%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61 R + F+ + L G F +P I + E+ T + ++ + K+ + P+ Sbjct: 23 RSAIGVFAFVVLLGLFGYFALPGII-----KSQAEQLITEKLHRQTTIG---KVEVNPYA 74 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 V D+++ + E + + E L + + L V + + P+++ Sbjct: 75 MQVTIHDMKLLEPEGDAVFASFEKLMVNVSYQSLFRLAPVVQQVQLSAPYIHLVRKDATH 134 Query: 122 SNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 N + + I + GRI+ D+ + V+ ++DL + + Sbjct: 135 YNIDDIIELINSQPPSPEPARFSVFNIELDKGRIEFDDRPAQTVHKIADLKIGVPFVSSL 194 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY------- 228 + V + + + K + A + + L + Sbjct: 195 P------SQVDVYVEPLLSASINGSPLLIKGKTHPFADTVDAVVDLNLDNMDLTSYLKYI 248 Query: 229 ---------PIIIDLFGNLFWNEKQPI-----YSGVFSVAGDFSKLLNLELSAKKSRLSG 274 +DL +++ + +G + + K LS Sbjct: 249 PGTPHFKIPSARLDLHMTATFSQPKKQAPSLLLNGDIKLKSLQVNDESGNSIVKLPELSI 308 Query: 275 NFKIS---DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314 + I++ + I + + + + Sbjct: 309 TLNEARVLSERFEIAKLSISGIAADITRKANGRFNFDNLLTPP 351 >gi|237714229|ref|ZP_04544710.1| outer membrane assembly protein [Bacteroides sp. D1] gi|262408395|ref|ZP_06084942.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294647540|ref|ZP_06725119.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] gi|294808577|ref|ZP_06767321.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] gi|229445721|gb|EEO51512.1| outer membrane assembly protein [Bacteroides sp. D1] gi|262353947|gb|EEZ03040.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292637108|gb|EFF55547.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] gi|294444220|gb|EFG12943.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] Length = 841 Score = 92.6 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 41/385 (10%), Positives = 100/385 (25%), Gaps = 55/385 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------ 55 +++ L V+++ F +P F+ K + + K Sbjct: 1 MKKGLKIAAITVGVIIILMFLLPF-----AFQGKIADIVKTEGNKMLNAQFDFKNLNISL 55 Query: 56 IHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112 P SV +D + + + ++ L + ++I+ L Sbjct: 56 FRNFPQASVTLEDFWLKGTGEFANDTLVQAGEVTAAVNLFSLFGDSGYDISKIFIEDTKL 115 Query: 113 NFYLSSKGVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 + + G +NW + V L++ +K + DQ+ Sbjct: 116 HAIILPDGRTNWDIMKPDTIATVETPAEEEASSPFKVKLQRFVIKNMNLIYDDQQGKMYA 175 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 + D N + + + L +++ S+ + G + + A Sbjct: 176 DIRDFNAICAGDLGSERTTLKLEAETKSLTYKMNGIPFLANANISAKMDVDADLANNKYT 235 Query: 221 IQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 ++ + I + G + + + K + + A Sbjct: 236 LKDNTIRLNAIQAGIDGWVALKDPAIDMDLKLNTNDIGFKEILSLIPA------------ 283 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339 + + + ++ K + D N ++M Sbjct: 284 ---IYATEFSSLKTDGTATLTATAKGILQGDTVPAFNIDMQVKDAMF------------- 327 Query: 340 KNKNDDLKKDDIQYSVNKKEEKDNS 364 + D I S N + N Sbjct: 328 RYPALPAGVDQINISANVQNPGGNI 352 >gi|186477256|ref|YP_001858726.1| hypothetical protein Bphy_2507 [Burkholderia phymatum STM815] gi|184193715|gb|ACC71680.1| conserved hypothetical protein [Burkholderia phymatum STM815] Length = 1419 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 41/322 (12%), Positives = 92/322 (28%), Gaps = 30/322 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI- 58 LR +L FL+ VV++ + + FR E + + ++ + G I H Sbjct: 31 LRVLLGIALFLYFVVVLAVLGLRYVVLPRVDSFRPQIESAVSEKIHAQLRI-GKIAPHWT 89 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 P + D+ I +E I S + + + + +D+P L Sbjct: 90 GFQPGIEVTDVTITNREGKV-ALTIPHASATVSWSSIWKLAPILSSVIVDKPDLLIERER 148 Query: 119 KGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQIS 170 G + + + + ++GG ++ D D L D+ L I Sbjct: 149 DGSLTVAGVMVPTTHSGNDTFSTWLLRQQAMILRGGTLRWHDARRDAPEIALQDIRLAIL 208 Query: 171 ARFLNI----ISPLSIDSIKGSVIAEGT---GNFDNKRSAFKITANFPAKNKAISLKIQL 223 + + +P + G + + T ++ L + Sbjct: 209 SDGYDHRLALQAPPDGKVLFGPLDFRASFRHARLAAMGKPVNWTGEAYISTGSVDLPMLA 268 Query: 224 FPLAYPI-IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS---GNFKI- 278 + +PI + + + L + + +L F Sbjct: 269 RYIDFPIETYAGRVANKIWLQFAQGHVRSASGEASGNNIALRVKPTQPKLDVPVAQFSWA 328 Query: 279 -----SDGNVRISRYKLQSILP 295 + + + + + P Sbjct: 329 VAHDGDEWTLDLDDLRAEFGQP 350 >gi|187477332|ref|YP_785356.1| hypothetical protein BAV0827 [Bordetella avium 197N] gi|115421918|emb|CAJ48438.1| putative exported protein [Bordetella avium 197N] Length = 1153 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 101/307 (32%), Gaps = 19/307 (6%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR G + VVL A + R ++G++++V G I + Sbjct: 12 RRCAKIFGTVVLVVLGLAGLAAWQL-PKVLRSALTHDVAAMLGREVSV-GDIAFNPF-TL 68 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 ++ +D+ I Q + + K+ + + A + L + + + P L Sbjct: 69 TLRAQDLAIAQPQSQTALLKVGLVEVSAAWRSLFWFAPVLDRVRVVAPQLALTREDLLRF 128 Query: 123 NW-------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 N+ + + + L + ++GGRI++ D+ S + + D++L + Sbjct: 129 NFSDIQQKLAASETSAEPDTPPAGLPRFALHRFSLEGGRIELDDKVSGRKQRIDDMSLSL 188 Query: 170 SARFLNIISPLSIDSIKGSVIAEGT-GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 + G+ + F + + L +Q + + Sbjct: 189 PFLSTFGHDRDVDLRPAVHMRINGSPLDIGGVARPFDALPSAKLDLRVEGLGLQQWADIW 248 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 P +DL L V+ A D L A +L+ +R S Sbjct: 249 P--LDLPLILDRALLDSRLQLVYQQAADGPPAFKLTGEAGLRQLNVRETSGAELLRWSAL 306 Query: 289 KLQSILP 295 L++IL Sbjct: 307 NLRNILS 313 >gi|298482088|ref|ZP_07000276.1| outer membrane assembly protein [Bacteroides sp. D22] gi|298271645|gb|EFI13218.1| outer membrane assembly protein [Bacteroides sp. D22] Length = 841 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 41/385 (10%), Positives = 100/385 (25%), Gaps = 55/385 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------ 55 +++ L V+++ F +P F+ K + + K Sbjct: 1 MKKGLKIAAITVGVIIILMFLLPF-----AFQGKIADIVKTEGNKMLNAQFDFKNLNISL 55 Query: 56 IHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112 P SV +D + + + ++ L + ++I+ L Sbjct: 56 FRNFPQASVTLEDFWLKGTGEFANDTLVQAGEVTAAVNLFSLFGDSGYDISKIFIEDTKL 115 Query: 113 NFYLSSKGVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 + + G +NW + V L++ +K + DQ+ Sbjct: 116 HAIILPDGRANWDIMKPDTIATVETPAEEEASSPFKVKLQRFVIKNMNLIYDDQQGKMYA 175 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 + D N + + + L +++ S+ + G + + A Sbjct: 176 DIRDFNAICAGDLGSERTTLKLEAETKSLTYKMNGIPFLANANISAKMDVDADLANNKYT 235 Query: 221 IQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 ++ + I + G + + + K + + A Sbjct: 236 LKDNTIRLNAIQAGIDGWVALKDPAIDMDLKLNTNDIGFKEILSLIPA------------ 283 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339 + + + ++ K + D N ++M Sbjct: 284 ---IYATEFSSLKTDGTATLTATAKGILQGDTVPAFNIDMQVKDAMF------------- 327 Query: 340 KNKNDDLKKDDIQYSVNKKEEKDNS 364 + D I S N + N Sbjct: 328 RYPALPAGVDQINISANVQNPGGNI 352 >gi|220926151|ref|YP_002501453.1| AsmA family protein [Methylobacterium nodulans ORS 2060] gi|219950758|gb|ACL61150.1| AsmA family protein [Methylobacterium nodulans ORS 2060] Length = 611 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 57/336 (16%), Positives = 103/336 (30%), Gaps = 30/336 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R +L+ G ++VL A + R R G +G + +LP P Sbjct: 31 RSILVLCGGASALVLAAAACQSWTVATPAARAFVGRHLARAYGLTFEAQGPTTLALLPAP 90 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + F+ +R+ G ++ L ++ LL+G+ + + L + Sbjct: 91 RLRFQHVRVLN--GGRLLAESRSLEVQLGLGALLTGQAEAAALTLAGTRLVLPEDDDRWA 148 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 R + L ++ V GRI + SD+ L DL L +S Sbjct: 149 GPLARLTARLADGARPLRRLSVTEGRITAGESGSDR---LGDLTLSVSWPRAGAG----- 200 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP-IIIDLFGNLFWN 241 + G ++ + A P + +A+P +DL G W Sbjct: 201 ------LDLSGRFSWRGVPTHVVFAAARPLDLAMGTPSPVRATIAWPSGSLDLDGTGSWQ 254 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRISRYKLQSI 293 P +G + A+ L G F+ + + +L Sbjct: 255 -GGPALAGEGRFTTRALSETLAWVGARAPLAPALGRVTLEGRFEARPDTLAMPSLRLVL- 312 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 + T D + + L S A DL+ Sbjct: 313 ---ADTVLDGAGAATLGPDGRLALSGTLAAERLDLS 345 >gi|325106519|ref|YP_004276173.1| AsmA family protein [Pedobacter saltans DSM 12145] gi|324975367|gb|ADY54351.1| AsmA family protein [Pedobacter saltans DSM 12145] Length = 885 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 42/277 (15%), Positives = 95/277 (34%), Gaps = 19/277 (6%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58 M ++++I + +F V+L+ ++PLF + + K+ K I + I Sbjct: 1 MSKKIIITISLIFVVILLAVASIPLFF-KDTIVSKVKNTINENLNAKVNFK-DIDLTIIS 58 Query: 59 -LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNF 114 P + D I + +KI+ L + + ++ G+ ++ ++ +D+P + Sbjct: 59 SFPQLGLKLNDFEIVGVDSFSTDTLAKIKNLQLNLNLMSVIKGDKYQINEVKLDEPKIYA 118 Query: 115 YLSSKGVSNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 + G +NW + T L+K +K G I D + L+++ Sbjct: 119 RVLKSGKANWDIVKSDSTKTSPQDTTASSFKAALKKYEIKNGNIIYDDASLNFYMALNNI 178 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 N F + L +S + + G + + ++ Sbjct: 179 NHSGKGDFTQDLFVLDTESNIEKLTVKYGGIPYLNGVHLEAGLPLDIDLAKMKFTLKENT 238 Query: 226 LAYP-IIIDLFGNLFWNEKQP-IYSGVFSVAGDFSKL 260 + +++ L G+L + F K Sbjct: 239 IKLNELVLSLVGSLAMPNDTDMVIDVKFDAEKSDLKN 275 >gi|319408120|emb|CBI81773.1| AsmA family [Bartonella schoenbuchensis R1] Length = 618 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 36/332 (10%), Positives = 88/332 (26%), Gaps = 51/332 (15%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67 + ++ +P + R + + G + ++ ++ + P+P F Sbjct: 4 VFVAVVFLLGTSVIVLPYLVSTDAIRVRMAQDLSAWTGYNVQLREPPRLKLFPYPKAFLS 63 Query: 68 DIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS--------- 117 I + K +D + + E + + + LL G + + I P Sbjct: 64 GITLTSKIDDVAPLMEAESIEVDLSLIDLLRGCVSFSETRIVHPQFVMEKPFKTVSDFFN 123 Query: 118 -------------SKGVSNWFQRKSTMDMIHNVI--LEKIHVKGGRIKIIDQESDQVYFL 162 D+ + +I ++ G + D SD + Sbjct: 124 TLSRSQGTLGLAVRNAREIVKLNPDQPDIESLLNQPFGRIVIENGVLIYRDSVSDVTEKI 183 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP---AKNKAISL 219 + LN + + + + + + I A+ SL Sbjct: 184 TGLN-----------ATIDWSESTQAARFRANARWHGELTELLINADQALLLLAGGQSSL 232 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS-----AKKSRL-- 272 ++ L I L + I+ G S+ + + +L Sbjct: 233 RVSFNSLRGGITFTGKARLS---EYYIFDGKVSMRSPGWNQTLAWIGGNQFWGGRLKLPI 289 Query: 273 --SGNFKISDGNVRISRYKLQSILPNSSTDED 302 +F + ++ N+ + Sbjct: 290 VWESHFLAQPKRIEMNNITFNMGAANARGALE 321 >gi|78355272|ref|YP_386721.1| hypothetical protein Dde_0225 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217677|gb|ABB37026.1| hypothetical protein Dde_0225 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 1261 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 78/306 (25%), Gaps = 28/306 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61 + ++ L L +V G F F+ R+ E + +G+ +V G + PF Sbjct: 15 KLAILWLAGLLAVWTAGGF----FLVPHIARDAVESNLSQALGRNCSVGG---MSFNPFT 67 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 SV +D + +K+ + + + + + ID+ ++ KG Sbjct: 68 LSVELRDTAVLRKDGSGPFISFRSVRAAPDITTIFYRAPVIRYISIDRLAVSLEFMGKGQ 127 Query: 122 SNWFQRKSTMDMIHN-----------VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 N+ + + I D + ++DLNLQ+ Sbjct: 128 YNFSDLMPPSAEARPEDSGQDDAVFPFAVRNFMLTNSSIVFRDTPHGITHTVTDLNLQVP 187 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL---A 227 + V + F+ + Sbjct: 188 ------FTSSLAGDRDAPVEPRMNATVNGNAVDFEGRIVPFGNKLRTDFIFAADNIELKD 241 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 Y I L + + FS A S L + + Sbjct: 242 YWQYIPAGIPLELASGRLSTAVNFSFAEQASGSLLHISGNGTLADVALYDGKKKVLGFDA 301 Query: 288 YKLQSI 293 + Sbjct: 302 FSYDIG 307 Score = 36.0 bits (81), Expect = 9.2, Method: Composition-based stats. Identities = 22/232 (9%), Positives = 63/232 (27%), Gaps = 10/232 (4%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 SV +D+ + + + L++ + + + +++P L+ G+ Sbjct: 726 SVAVRDVLVRDAMHKDGIASLGSLAVNGIAFDGAAETLSAETVRLEKPKLDILREQDGML 785 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL-----SDLNLQISARFLNII 177 N + V + V + + + +D ++Q+ + Sbjct: 786 NL----QRVLRAGPVQVNATAVADATVTADVTGIPEEESVLPQTGADGDVQMRVAVNATM 841 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 + A +F + R ++ + +S+ + L Sbjct: 842 PGAPASDKDSASPAGLEKHFSDVRLGGAFISDGTVHFRDVSVSPPFELTLAGLNATLSSV 901 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 +P + G L S + + N+ + + Sbjct: 902 SLSAASRPDLRVDGRLNGVPLTLQGALNPLVSPPYS-DLALRIANLDLVAFS 952 >gi|295086692|emb|CBK68215.1| AsmA family. [Bacteroides xylanisolvens XB1A] Length = 841 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 41/385 (10%), Positives = 100/385 (25%), Gaps = 55/385 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------ 55 +++ L V+++ F +P F+ K + + K Sbjct: 1 MKKGLKIAAITVGVIIILMFLLPF-----AFQGKIADIVKTEGNKMLNAQFDFKNLNISL 55 Query: 56 IHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112 P SV +D + + + ++ L + ++I+ L Sbjct: 56 FRNFPQASVTLEDFWLKGTGEFANDTLVQAGEVTAAVNLFSLFGDSGYDISKIFIEDTKL 115 Query: 113 NFYLSSKGVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 + + G +NW + V L++ +K + DQ+ Sbjct: 116 HAIILPDGRANWDIMKPDTIATVETPAEEEASSPFKVKLQRFVIKNMNLIYDDQQGKMYA 175 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 + D N + + + L +++ S+ + G + + A Sbjct: 176 DIRDFNAICAGDLGSERTTLKLEAETKSLTYKMNGIPFLANANISAKMDVDADLANNKYT 235 Query: 221 IQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 ++ + I + G + + + K + + A Sbjct: 236 LKDNTIRLNAIQAGIDGWVALKDPAIDMDLKLNTNDIGFKEILSLIPA------------ 283 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339 + + + ++ K + D N ++M Sbjct: 284 ---IYATEFSSLKTDGTATLTATAKGILQGDTVPAFNIDMQVKDAMF------------- 327 Query: 340 KNKNDDLKKDDIQYSVNKKEEKDNS 364 + D I S N + N Sbjct: 328 RYPALPAGVDQINISANVQNPGGNI 352 >gi|150377127|ref|YP_001313723.1| AsmA family protein [Sinorhizobium medicae WSM419] gi|150031674|gb|ABR63790.1| AsmA family protein [Sinorhizobium medicae WSM419] Length = 1013 Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 48/346 (13%), Positives = 115/346 (33%), Gaps = 22/346 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RRV++ + ++ + +P I R + RQ + G IA G +K P Sbjct: 1 MRRVILCVLGAAALAVTAIAILPSLISSDWMRAELGRQLSSATGSSIAFNGPVKFSAFPS 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF-YLSSKG 120 +V KD+ + + G ++ ++ F L + +R+ ++ +D+P + ++ Sbjct: 61 LAVVAKDVTLSAEAQGVT-AEFAEVTGSVAFSSLWADRLRIEEISVDRPVIILDEKAADE 119 Query: 121 VSNWFQRKSTMDMIHNV----------ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + + + ++ + + G I + + +SD+ L +S Sbjct: 120 TTPVQEGSGEARSSDPLPDLAALLERSAIDSVSITSGTF-IRRSAARREEVVSDVELTLS 178 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 ++ LS + G + E + + + ++++ P Sbjct: 179 IPDIDDTFSLSASARMGELTYEASFTIS----TLRSLLGRQPADLDLTVEADPAPAPGLT 234 Query: 231 IIDLFGNLFWNEKQ--PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 + G + N I G L L + K++R + + ++ + Sbjct: 235 SLSASGQVTLNANGSYQIRGGKVETGEQAFGLNALFVPGKRARFLADLDAD--RLDLTPF 292 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334 + + S TK L F ++ +N Sbjct: 293 VDTTPAASPSKVLSTGTKTDAGNRVGLQF-LASFDADVSINAAAIT 337 >gi|293370411|ref|ZP_06616965.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] gi|292634559|gb|EFF53094.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] Length = 842 Score = 91.9 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 43/386 (11%), Positives = 100/386 (25%), Gaps = 56/386 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------ 55 +++ L V+++ F +P F+ K + + K Sbjct: 1 MKKGLKIAAITVGVIIILMFLLPF-----AFQGKIADIVKTEGNKMLNAQFDFKNLNISL 55 Query: 56 IHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112 P SV +D + + + ++ L + ++I+ L Sbjct: 56 FRNFPQASVTLEDFWLKGTGEFANDTLVQAGEVTAAVNLFSLFGDSGYDISKIFIEDTRL 115 Query: 113 NFYLSSKGVSNWFQRKST-------------MDMIHNVILEKIHVKGGRIKIIDQESDQV 159 + + G +NW K V L++ +K + DQ+ Sbjct: 116 HAIVLPDGRANWDIMKPDTTATAEAPVSEEEASSPFKVKLQRFVIKNMNLIYDDQQGKMY 175 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 + D N + + + L +++ S+ + G + T + A Sbjct: 176 ADIRDFNAVCAGDLGSDRTTLKLEAETKSLTYKMNGIPFLANANISATMDVDADLANNKY 235 Query: 220 KIQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278 ++ + I + G + + + K + + A Sbjct: 236 TLKDNTIRLNAIQAGIDGWVALKDPAIDIDLKLNTNDIGFKEILSLIPA----------- 284 Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE 338 + + + ++ K + D N +M Sbjct: 285 ----IYATEFSSLKTDGTATLTATAKGILQGDTVPAFNIDMQVKNAMF------------ 328 Query: 339 KKNKNDDLKKDDIQYSVNKKEEKDNS 364 + D I S N + N Sbjct: 329 -RYPALPAGVDQINISANVQNPGGNI 353 >gi|260171738|ref|ZP_05758150.1| outer membrane assembly protein [Bacteroides sp. D2] gi|315920050|ref|ZP_07916290.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313693925|gb|EFS30760.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 842 Score = 91.9 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 43/386 (11%), Positives = 100/386 (25%), Gaps = 56/386 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------ 55 +++ L V+++ F +P F+ K + + K Sbjct: 1 MKKGLKIAAITVGVIIILMFLLPF-----AFQGKIADIVKTEGNKMLNAQFDFKNLNISL 55 Query: 56 IHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112 P SV +D + + + ++ L + ++I+ L Sbjct: 56 FRNFPQASVTLEDFWLKGTGEFANDTLVQAGEVTAAVNLFSLFGDSGYDISKIFIEDTRL 115 Query: 113 NFYLSSKGVSNWFQRKST-------------MDMIHNVILEKIHVKGGRIKIIDQESDQV 159 + + G +NW K V L++ +K + DQ+ Sbjct: 116 HAIVLPDGRANWDIMKPDTTATAEAPVSEEEASSPFKVKLQRFVIKNMNLIYDDQQGKMY 175 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 + D N + + + L +++ S+ + G + T + A Sbjct: 176 ADIRDFNAVCAGDLGSDRTTLKLEAETKSLTYKMNGIPFLANANISATMDVDADLANNKY 235 Query: 220 KIQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278 ++ + I + G + + + K + + A Sbjct: 236 TLKDNTIRLNAIQAGIDGWVALKDPAIDMDLKLNTNDIGFKEILSLIPA----------- 284 Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE 338 + + + ++ K + D N +M Sbjct: 285 ----IYATEFSSLKTDGTATLTATAKGILQGDTVPAFNIDMQVKNAMF------------ 328 Query: 339 KKNKNDDLKKDDIQYSVNKKEEKDNS 364 + D I S N + N Sbjct: 329 -RYPALPAGVDQINISANVQNPGGNI 353 >gi|218508183|ref|ZP_03506061.1| hypothetical conserved membrane protein [Rhizobium etli Brasil 5] Length = 149 Score = 91.9 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 42/121 (34%), Gaps = 2/121 (1%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66 + L + + P I R E + G + ++G + P P + Sbjct: 29 VLLLIALGLFVALRVAAPYLITTGFVRSGIEDALSKWTGYQAEIQGDPVLEFWPTPRITL 88 Query: 67 KDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124 ++ I Q +IE LS + L G + ++ +P+L KG+ +W Sbjct: 89 NEVTIRQPRESGDKLLGRIESLSADFSLIDALRGRTSFHEFHLLRPNLALTRDEKGLIDW 148 Query: 125 F 125 Sbjct: 149 S 149 >gi|319405182|emb|CBI78787.1| AsmA family [Bartonella sp. AR 15-3] Length = 626 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 56/402 (13%), Positives = 124/402 (30%), Gaps = 61/402 (15%) Query: 1 MLRRVLIGLGFLFSVVL----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 M +++ L +F ++ +P + R + ++ G + ++ ++ Sbjct: 1 MCIKIIKFLSGIFIAIVFLGGAAVIILPYIVSTDAIRIRLAQDLSVWTGYNVQLRDPPRL 60 Query: 57 HILPFPSVFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 I P+P F + + K E+ + ++E + + + LL G I + I P Sbjct: 61 KIFPYPKAFLSGVTLTPKIENIAPLMEVESIEVDLSLVSLLWGHISFSETRIMYPKFVMD 120 Query: 116 LSSKGVSNWFQR-------------------KSTMDMIHNVIL-----EKIHVKGGRIKI 151 K VS++F K D L +I ++ G + Sbjct: 121 KPVKTVSDFFDTLLRSQGALGLAIQNAREVIKHNPDNPDVASLLNQPFGRIIIENGTLMY 180 Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP 211 D S + +++LN + + + ++ + + + I A+ Sbjct: 181 RDGVSSVMEQITELN-----------ASIDWPGLTQALQFHAKARWHGELTELLINADQA 229 Query: 212 ---AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS-- 266 LKI + I + L + I+ G S+ + Sbjct: 230 LFLLAGGKSLLKISFNSVRGGITFEGQARLS---EYYIFDGKVSLRSPGWDQTVAWIGGN 286 Query: 267 ------AKKSRL-SGNFKISDGNVRISRYKLQSILPNS----STDEDNKTKVSQDEE--N 313 K + +F +R++ L N+ D N+ + + Sbjct: 287 QFWGHELKIPIVWESHFLAQPARIRMNNVILMMGTANARGALEFDFKNRVPILIGSLGFD 346 Query: 314 LLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV 355 L+F+ + E +FF D++ Q + Sbjct: 347 KLDFNIMKSLFFCSKQENEFFNLAFLNQIGLDIRLSASQAKI 388 >gi|77918917|ref|YP_356732.1| hypothetical protein Pcar_1313 [Pelobacter carbinolicus DSM 2380] gi|77545000|gb|ABA88562.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380] Length = 809 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 35/328 (10%), Positives = 107/328 (32%), Gaps = 30/328 (9%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE 84 I RE A + + + + G I I + + D+ + KE + + Sbjct: 28 FLISSEQVREAVLPLAKNALQRDVVL-GDIDISLFS--GIVLHDLTVMDKEGRTPFVEAG 84 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------------FQRK 128 + +R F PLL ++ V ++ ++QP L ++ G N+ + Sbjct: 85 TVRLRYRFWPLLKLKVVVDEIGLEQPRLRVVRNADGSFNFSDLLQRKQTAGSQIQTSASE 144 Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQ----VYFLSDLNLQISARFLNIISPLSIDS 184 + ++++ ++ + G+++ +D + + L++ ++ + P+ + Sbjct: 145 TGEGRSFDLLVSEVLLSDGKVQFVDYQPNPDNPFTLELTEFKVRAENISATHVFPIEAEV 204 Query: 185 IKGSVIAEGTGNFDNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +G D ++ + A + + + Q + I+ ++ Sbjct: 205 AINQARLAASGQVDPSAKGGQLKIHLTDLNAPDFSAYYQKQKAVGLKALKINADLDVEGT 264 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKK---SRLSGNFKISDGNVRISRYKLQSILPNSS 298 Q +G + G + + L + ++ + + ++ Sbjct: 265 VGQLHTAGRIVLDGLHLEPAATSGRTIRDLDISLDYDLELDRSAGVVDLKRGHLLVGGLP 324 Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMH 326 D + + ++ + + + Sbjct: 325 VDVQGRAE-PFGGTPSVDGTLSLSRLDL 351 >gi|119116611|dbj|BAF40877.1| hypothetical protein [Photobacterium phosphoreum] Length = 1305 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 38/335 (11%), Positives = 109/335 (32%), Gaps = 16/335 (4%) Query: 2 LRRVLIGLGFLF---SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58 L++V + V + G + +D + R + + T + +K +KG + + + Sbjct: 18 LKKVAVWTIVALLTPIVTISGVLAYGVKLDLSTHRSEINQWLTKTLDRKTDIKGSMALTL 77 Query: 59 LPFPSVFFKDIRIDQ--KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 P + D+ I ++ + LPLL +++ + + LN Sbjct: 78 SFSPEIELSDVTIANLKSMPWQPMLSSGYIAAKISVLPLLQNTLKIDYLNLKDISLNLLR 137 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 +G NW +K ++ + + + + ++ + Q + + Sbjct: 138 DQQGHENWVFKKQPTPSKQPSSSTAF-----KLVLSNNINAEKVRVNYED-QAKNTYYDG 191 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 + + G+ +T + ++ +D+ Sbjct: 192 YLDHLALTKPDKWLLVAQGDAMGSEYNLSLTGDLQKLINNQHGQLFAKGSFAGAELDVDA 251 Query: 237 NL----FWNEKQPIYSGVFSVAGDFSKLLNLELS-AKKSRLSGNFKISDGNVRISRYKLQ 291 N+ ++ S + + LL+L+L ++ S+ +++ Sbjct: 252 NITPFSSGDDSTANISLNWKDTNQIASLLDLDLQHVAPLSITTELSASNKGFAFKDIQVR 311 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 S + +++ + + + + N++N + E Sbjct: 312 SPITSANGHINVRFAQNAQQLNIINGKLDIPEIDL 346 >gi|253570091|ref|ZP_04847500.1| outer membrane assembly protein [Bacteroides sp. 1_1_6] gi|251840472|gb|EES68554.1| outer membrane assembly protein [Bacteroides sp. 1_1_6] Length = 838 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 37/377 (9%), Positives = 102/377 (27%), Gaps = 36/377 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-- 59 +++ L + V+++ +P + + ++ + K + I + Sbjct: 1 MKKGLKIAAIVVGVIIILMLLLPFAFQ-GKIAGIVKTEGNKMLNAQFDFK-KLNISLFRN 58 Query: 60 -PFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFY 115 P SV +D + + + ++ L + ++I+ L+ Sbjct: 59 FPQASVTLEDFWLKGAGEFANDTLVQAGEVTATINLFSLFGDSGYDISKVFIEDTRLHAI 118 Query: 116 LSSKGVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 + G +NW V L++ +K + DQ+ + Sbjct: 119 VLPDGRANWDIMKPDTTDTQETPAAEEDSSPFKVKLQRFVIKNMNLIYDDQQGKMYADIR 178 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 D N + + + L +++ S+ + G + + A ++ Sbjct: 179 DFNALCAGDLGSDRTTLKLEAETKSLTYKMNGIPFLANANISAKMDVDADLANNKYTLKD 238 Query: 224 FPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 + I + G + + + K + + A Sbjct: 239 NTIRLNAIQAGIDGWVELKDPAIDMDLKLNTNDVGFKEILSLIPA--------------- 283 Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342 + + + ++ K + D N +M ++ N Sbjct: 284 IYATEFSSLKTDGTATLAASAKGTLQGDTVPAFNIDMQVKNAMFRYPALPAGVDQININA 343 Query: 343 NDDLKKDDIQYSVNKKE 359 N +I + + Sbjct: 344 NVRNPGGNIDLTTIQIN 360 >gi|241767683|ref|ZP_04765315.1| protein of unknown function DUF748 [Acidovorax delafieldii 2AN] gi|241361363|gb|EER57882.1| protein of unknown function DUF748 [Acidovorax delafieldii 2AN] Length = 344 Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 79/248 (31%), Gaps = 17/248 (6%) Query: 29 WTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSM 88 + ER A+ +G+ + V G I + +DI + + +I + Sbjct: 41 PALAKGPLERMASEALGRPVTV-GAIDFKPW-TLEITLRDIAVGGTAGAPPQLEIARIYA 98 Query: 89 RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILE 140 AE LL V + ID PHL + G + + L Sbjct: 99 DAEMQSLLRLAPVVDALEIDAPHLRLTHLADGHYDVDDILARLSTPSGKPDTGPARLALY 158 Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200 + + GG + D+ D+ + + L L++ + V + + Sbjct: 159 NLALTGGAVDFTDRTVDRTHAVRQLALKVP------FISTLPSQREVKVEPHLSFAIGDS 212 Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259 R + A+ ++ L P + L +L K I VA + + Sbjct: 213 RFDSSVQGTPFAQTGKGDATVKWQGLDLAPYLAYLPASLPVRVKGAILDMDVKVAFEQAP 272 Query: 260 LLNLELSA 267 L ++L+ Sbjct: 273 HLAVKLTG 280 >gi|283851605|ref|ZP_06368884.1| AsmA family protein [Desulfovibrio sp. FW1012B] gi|283572935|gb|EFC20916.1| AsmA family protein [Desulfovibrio sp. FW1012B] Length = 1296 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 40/335 (11%), Positives = 90/335 (26%), Gaps = 52/335 (15%) Query: 21 FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--S 78 F I + E+ T +G+++ V G + I P+ + + + ++ Sbjct: 46 FAARQMIGPERLKTITEQALTDALGRRVTVSGDVSILFAPWFGLAMGPVAVAERPGAGDG 105 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI 138 L M LPLL+ + + + L+ + G +NW + Sbjct: 106 PMLTAGRLEMTIRVLPLLARVVSPGSVRVRDLGLHLRRDASGRTNWDDLTAPHSAAAASA 165 Query: 139 LE--------KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + I ++ + D + +V ++D L+ + Sbjct: 166 PDWEVAPEPRDILIENASVDYRDAVTGRVLAVTDARLK--------------TGLGQPFD 211 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250 A + ++ + P L + E G Sbjct: 212 FS-----------LAFRAAGLLPDTSLECHARGKATFDPGSGRLAFSKTVVESALTILGP 260 Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS-Q 309 + G L L+A +G ++ +VR+ + + Sbjct: 261 LAPGGATPARLVSRLTADYDPAAGTLSLAGLDVRLP-----------GGRITGSAEATGL 309 Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344 + + A DL+ + E + Sbjct: 310 GQSPKVR-----AALALDLDMAGKWRELLGLSPAA 339 >gi|182412097|ref|YP_001817163.1| hypothetical protein Oter_0273 [Opitutus terrae PB90-1] gi|177839311|gb|ACB73563.1| protein of unknown function DUF748 [Opitutus terrae PB90-1] Length = 1098 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 102/336 (30%), Gaps = 36/336 (10%) Query: 12 LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71 + V++ + F+ R + +++ +G+ +++ G +KI F S+ + ++I Sbjct: 11 ILLVLVGVYAVLGYFVLPPIARTELQKRMAAQLGRTVSI-GAVKIDPFAF-SIALERVQI 68 Query: 72 DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126 + LS+ + L L GE + ++ ++ + G ++ Sbjct: 69 MNASGAEPFAGWRRLSVNFDPLASLRGEWVLGEITLEDFRGGVEIDEHGTPSFSDLLDRF 128 Query: 127 ----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLNLQISAR 172 + ++ V G ++ +D+ +V+ + L Sbjct: 129 GKTREPDAARPAEPRQRSRPWRISRLTVAGAQVDFVDRSRSEVFRTLLGPVNFTLVEFRT 188 Query: 173 FLNIISPLSIDSIKGS---VIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKIQLFPLAY 228 +P ++ S + G+ + S + +K L Q+ L Sbjct: 189 AGGHGAPYRFEARSESGEKLTWTGSLSARPLTSTGEWRLENVLLSKYAPYLDEQMNLLLT 248 Query: 229 PIIIDLFG-----NLFWNEKQPIYSGVFSVAGDFS---KLLNLELSAKKSRLSGNFKISD 280 + L G L + + + G + L + L G F + Sbjct: 249 AGKLTLSGRYDVSFLPDDRRLQVTEGAAQLTNLKLVERATGQPLLELPTAELRG-FSVDG 307 Query: 281 --GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314 V + +L D D ++ Sbjct: 308 LQRRVALGTLRLSGGRLAVRRDADGALNLASVLAPR 343 Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 27/240 (11%), Positives = 69/240 (28%), Gaps = 32/240 (13%) Query: 47 KIAVKGGIKIHILP---FPSVF-----FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG 98 K+ + G + LP V ++++ ++ G ++ +R + L Sbjct: 251 KLTLSGRYDVSFLPDDRRLQVTEGAAQLTNLKLVERATGQPLLELPTAELRGFSVDGLQR 310 Query: 99 EIRVFDMYIDQPHLNFYLSSKGVSNWF--------------QRKSTMDMIHNVILEKIHV 144 + + + + L + G N + D V + V Sbjct: 311 RVALGTLRLSGGRLAVRRDADGALNLASVLAPRSAGSSAGDATEPAHDQPIEVTATEFGV 370 Query: 145 KGGRIKIIDQESDQV--YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202 + ++ D + + L+ +N + + L +++ G + +GT + Sbjct: 371 RDFVVQWHDGTTPRPVDIELTGVNATVKDVTSTRGATLPVEATFG-LNPQGTARASGNVA 429 Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIII-------DLFGNLFWNEKQPIYSGVFSVAG 255 N + + L + + + L G + F+ G Sbjct: 430 LAPFRLNLDLELAWMPLPPFSGYMERALPVRLARGTASLKGRVAVAPGPAGPDVSFTGGG 489 >gi|171463804|ref|YP_001797917.1| AsmA family protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193342|gb|ACB44303.1| AsmA family protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 265 Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 80/247 (32%), Gaps = 20/247 (8%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKI 83 F++ + + I G+++ + G + ++ P SV + + + + Sbjct: 17 FVNTSQLTKLLSSSVQEITGRELKITGPVSLNFFPSISVKTEQVSLSNVPWASNPEMLTV 76 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------------FQR 127 + L + PLL G++ + + + N + GV NW Sbjct: 77 KQLELDISIWPLLKGDVEISRIALVGVDANLQTNKAGVGNWNLTPPVLNQNISSGQSVAT 136 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187 + V L+ + V +I D L L + + ++ + K Sbjct: 137 PDSASDSSFVTLKTLDVIDAQINYQDDNQAPKIILIP-KLSLGSSEGRVMILMDAQYAKH 195 Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 S+ +G + + + F + + + L + LA ID + + Sbjct: 196 SLNLKGKTS-SLRNAYFAWNQSPLKMDLDLVLTLNGKSLAITGDIDKTPQVLPQFNVSLI 254 Query: 248 SGVFSVA 254 S F +A Sbjct: 255 SKSFDLA 261 >gi|257095597|ref|YP_003169238.1| hypothetical protein CAP2UW1_4067 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048121|gb|ACV37309.1| conserved hypothetical protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 1307 Score = 91.1 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 87/285 (30%), Gaps = 22/285 (7%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFK 67 GF+ V+ + +P + +R + ERQ ++ +G + + G I+ P + Sbjct: 42 FGFVLLVLALRYLVLP---NIESYRPEIERQLSVGLGLSVVI-GKIEASWAGLNPDLILS 97 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127 D+RI + + + + ++R+ + I +P L+ G Sbjct: 98 DVRIADAQG-QPALAFTRVEGVLSWSSIPHWQLRLGLLQIAEPTLHLRRDVDGRFYVAGI 156 Query: 128 KSTMDMI------HNVILEKIHVKGGRIKIIDQES-DQVYFLSDLNLQISARFLNIISPL 180 + D + +I V+G + D + L D++ + L Sbjct: 157 AVSQDGGDGSVADWILAQRRIRVEGATVVWEDAKREAPPLILEDVDFALDNNGRQHRFGL 216 Query: 181 SI---DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII-DLFG 236 + + G + A + L + L YP+ + G Sbjct: 217 TAMPPAEFASRIDLRGDFRGRSIEQAQSWQGQAFVQIDYADLAVWRAWLDYPLALPHGRG 276 Query: 237 NLFWNEKQP-----IYSGVFSVAGDFSKLLNLELSAKKSRLSGNF 276 + + FS+ +L R+SG Sbjct: 277 AVRAWAGFADGGLRDLTADFSLHDVNLRLAKDLPELDLERMSGRL 321 >gi|255691111|ref|ZP_05414786.1| outer membrane assembly protein [Bacteroides finegoldii DSM 17565] gi|260623464|gb|EEX46335.1| outer membrane assembly protein [Bacteroides finegoldii DSM 17565] Length = 841 Score = 91.1 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 41/386 (10%), Positives = 100/386 (25%), Gaps = 57/386 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQAT----LIVGKKIAVKGGIKIH 57 +++ L V+++ +P F+ ++ + + + I Sbjct: 1 MKKGLKIAAITVGVIIILMLLLPF-----AFKGKIADIVKTEGNKMLNAQFDFE-RLNIS 54 Query: 58 IL---PFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPH 111 + P SV +D + + + ++ L + ++I+ Sbjct: 55 LFRNFPQASVTLEDFWLKGAGEFANDTLVQAGEVTAAINLFSLFGDSGYDISKIFIEDTR 114 Query: 112 LNFYLSSKGVSNWFQRKSTM------------DMIHNVILEKIHVKGGRIKIIDQESDQV 159 L+ + G NW K V L++ +K + DQ+ Sbjct: 115 LHAIVLPDGQVNWDIMKPDTTATEETPTAEEESSPFKVKLQQFVIKNMNLVYDDQQGKMY 174 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 + D N S + + L +++ S+ + G + + A Sbjct: 175 ADIRDFNAVCSGDLGSDRTTLQLEAETQSLTYKMNGIPFLADANISAKMDIDADLANNKY 234 Query: 220 KIQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278 ++ + I + G + + + K + + A Sbjct: 235 TLKDNTIRLNAIQAGIDGWVALQDPAIDMDLKLNTNDIGFKEILSLIPA----------- 283 Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE 338 + + + ++ K + D N +M Sbjct: 284 ----IYATEFSSLKTDGTATLTAAAKGVLQGDTVPAFNIDMQIKNAMF------------ 327 Query: 339 KKNKNDDLKKDDIQYSVNKKEEKDNS 364 + D I S N + N Sbjct: 328 -RYPALPAGVDQINISANVQNPGGNI 352 >gi|29349537|ref|NP_813040.1| outer membrane assembly protein [Bacteroides thetaiotaomicron VPI-5482] gi|29341446|gb|AAO79234.1| outer membrane assembly protein [Bacteroides thetaiotaomicron VPI-5482] Length = 838 Score = 91.1 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 37/377 (9%), Positives = 102/377 (27%), Gaps = 36/377 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-- 59 +++ L + V+++ +P + + ++ + K + I + Sbjct: 1 MKKGLKIAAIVVGVIIILMLLLPFAFQ-GKIAGIVKTEGNKMLNAQFDFK-KLNISLFRN 58 Query: 60 -PFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFY 115 P SV +D + + + ++ L + ++I+ L+ Sbjct: 59 FPQASVTLEDFWLKGAGEFANDTLVQAGEVTATINLFSLFGDSGYDISKVFIEDTRLHAI 118 Query: 116 LSSKGVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 + G +NW V L++ +K + DQ+ + Sbjct: 119 VLPDGRANWDIMKPDTTDTQETPAAEEDSSPFKVKLQRFVIKNMNLIYDDQQGKMYADIR 178 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 D N + + + L +++ S+ + G + + A ++ Sbjct: 179 DFNALCAGDLGSDRTTLKLEAETKSLTYKMNGIPFLANANISAKMDVDADLANNKYTLKD 238 Query: 224 FPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 + I + G + + + K + + A Sbjct: 239 NTIRLNAIQAGIDGWVELKDPAIDMDLKLNTNDVGFKEILSLIPA--------------- 283 Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342 + + + ++ K + D N +M ++ N Sbjct: 284 IYATEFSSLKTDGTATLAASAKGTLQGDTVPAFNIDMQVKNAMFRYPALPAGVDQININA 343 Query: 343 NDDLKKDDIQYSVNKKE 359 N +I + + Sbjct: 344 NVRNPGGNIDLTTIQIN 360 >gi|56475951|ref|YP_157540.1| hypothetical protein ebA972 [Aromatoleum aromaticum EbN1] gi|56311994|emb|CAI06639.1| probable transmembrane protein [Aromatoleum aromaticum EbN1] Length = 1294 Score = 91.1 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 85/312 (27%), Gaps = 19/312 (6%) Query: 3 RRVLIGLGFLFSVVLVGAFTV--PLFIDWTDFREDFERQATLIVGKKIAVKG-GIKIHIL 59 R V IGL F V + V L +R VG +++ + Sbjct: 25 RPVAIGLAVAFFVAALSFLLVRDVLLPRADQYRGHLAALIGDAVGLPVSIDALSADVS-G 83 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + + + +E +++ + + LL G+ + + P L + Sbjct: 84 LRPRLHLSGVELRDREG-RPALRLDTVDATLAWWSLLRGQPHFHRLVLHAPQLALRRDAG 142 Query: 120 GVSNWFQRKSTMDMI------HNVILEKIHVKGGRIKIID-QESDQVYFLSDLNLQISAR 172 G +I ++ + D + + L +N +++ Sbjct: 143 GQLFVAGIPVASGGPSGGLSDWLFGQREIVIRDAAVSWHDARRAAPELRLEQVNFRLAHA 202 Query: 173 FLNIIS---PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 ++ ++ G + L + YP Sbjct: 203 GGRYRFGLQAAPPAALASTLDLRGDITSAQPAEPGTWSGELYLALAQADLGGWRAWIDYP 262 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 I + G + + A + + L+A +++ R+S + Sbjct: 263 IELAGNGGMRAWLELTHGQPEAFTANFAADEIATRLAADLP----ELQLASARGRLSGRR 318 Query: 290 LQSILPNSSTDE 301 + L S+ Sbjct: 319 SPAGLSLSARAL 330 >gi|170751383|ref|YP_001757643.1| AsmA family protein [Methylobacterium radiotolerans JCM 2831] gi|170657905|gb|ACB26960.1| AsmA family protein [Methylobacterium radiotolerans JCM 2831] Length = 610 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 96/334 (28%), Gaps = 33/334 (9%) Query: 12 LFSVVLVGAFTVPL-FIDW---TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67 +F + L L DW F R+A G + ++G ++ +LP+P + F Sbjct: 7 IFVLALGSLIAAGLGLRDWPVEDGRVTAFARRAFDAYGLGLTLEGPARLAVLPWPRLTFD 66 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127 +R+ G ++ L++ + L LL G V + ++ G R Sbjct: 67 RVRLAAGSAGPVLAEEGRLTIDLDPLSLLGGRAAVSGLRLEGA--RLSDDPAGWDAALAR 124 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187 + + RI + D D++L I+ + Sbjct: 125 LAEQARSGE------TARPRRIVLRDARLAAGDAARDIDLDIAWPLWGRAA--------- 169 Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP-IIIDLFGNLFWNE---K 243 + + + +T PA + +P + G + Sbjct: 170 --EGRASLIWRGVPTRIALTHLRPAALAQRRGSPFTAEITWPNGSLAADGTVAPPAEGGA 227 Query: 244 QPIYSGVFSVAGDFSKL------LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297 P+ SG ++ L+ S + + +S L+ L + Sbjct: 228 LPVMSGQVRFETRSLPESLAWIGRDVPLAPLAGAFSVDGRFETAERSVSWPSLRIGLGQN 287 Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331 + + + L+ A DL Sbjct: 288 VLEGAGAVALGPGKAPRLSVQATLAAETLDLTPL 321 >gi|145300962|ref|YP_001143803.1| hypothetical protein ASA_4114 [Aeromonas salmonicida subsp. salmonicida A449] gi|142853734|gb|ABO92055.1| conserved hypothetical protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 689 Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 40/374 (10%), Positives = 113/374 (30%), Gaps = 34/374 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR +L FL V V D R + G + + G + + L Sbjct: 5 LRALLYTFAFLLLFVWVALG----LFDAERARGPIASWISQQTGVPVTI-GRLVFNPLHP 59 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 ++ + + ++ L + E + L+ ++R+ + + +P + L Sbjct: 60 YTLLAEQVSYGDA------ITLDKLYLEIESIDWLNRDVRIAHLDLIRPVIKLPLP---- 109 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + I + ++++ + + + S L+D L R L+ Sbjct: 110 NTLPTLPVHSLTISDSTIDRLSLHSDELTL----SGLNATLNDWQLLNPVRPPQANLSLN 165 Query: 182 IDSIKGSV----IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII-DLFG 236 I+ ++ G + + + + + + L A + + +L Sbjct: 166 INELETPAFALSRLNLKGRLEGQVLSTD-KLTANLFDGLLETGMTLDWPARSLRLHNLKA 224 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 E + + + + ++ +++ N +++ + Q+ Sbjct: 225 QGMRVEWGAMGQPELPLRHISLDTGQVR-DVSITAITQEISLNNFNGQLTAFSWQAGSTP 283 Query: 297 SSTDEDNKTKVSQD----EENLLNFSENGAESMHDLN----ETDFFEEEEKKNKNDDLKK 348 + + + + E+ S + + ++ E +F + + L Sbjct: 284 TGYFTGSLGDLGRGLFQLEDLKGRVSFSPQQIDAEVQGKAYEGEFNLDLALDTQQQKLTL 343 Query: 349 DDIQYSVNKKEEKD 362 D+ S + Sbjct: 344 KDMTLSGMDISLPE 357 >gi|319953648|ref|YP_004164915.1| outer membrane protein [Cellulophaga algicola DSM 14237] gi|319422308|gb|ADV49417.1| putative outer membrane protein [Cellulophaga algicola DSM 14237] Length = 908 Score = 90.7 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 41/332 (12%), Positives = 92/332 (27%), Gaps = 39/332 (11%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK----- 55 M +++L +G + + ++ P F + V I + Sbjct: 1 MKKKILKIVGIILLLFVITLIAAPFF-----LKGKIADIIKNKVNNSITATFDFEDADLT 55 Query: 56 -IHILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE---IRVFDMYIDQ 109 P + I + K G +++ L G I + + ID Sbjct: 56 LFSSFPNAKLTMNAISLVNKAPFVGDTLFSSNEVALEMSIKELFKGADEPIAISSLTIDN 115 Query: 110 PHLNFYLSSKGVSNW---------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 +N + G +N+ ++ + ++ + RIK +D+ + + Sbjct: 116 ALINIIANEDGAANYDIAVPSTETAAEETDASSNFTLSMKSYAITNTRIKYLDKATGMRF 175 Query: 161 FLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 L D+N + S L + S + T + S Sbjct: 176 ELIDMNHSGTGDLSLEKSELDTKTSGLVSFEMDSTNYLNKNPIKLDALIGVDLATSTYSF 235 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS------------A 267 ++ + + + G + N+ F K + Sbjct: 236 -LKNEAMVNQLPLVFDGFIKLNDDSQEIDISFKTPSSDFKNFLAVIPEEYSKNIENVTTT 294 Query: 268 KKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 ++G F + I ++K+ N+S Sbjct: 295 GNFSIAGRFNGIVDDTHIPKFKIDINSDNASF 326 >gi|124265783|ref|YP_001019787.1| outer membrane biogenesis protein [Methylibium petroleiphilum PM1] gi|124258558|gb|ABM93552.1| uncharacterized protein involved in outer membrane biogenesis [Methylibium petroleiphilum PM1] Length = 826 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 35/324 (10%), Positives = 84/324 (25%), Gaps = 38/324 (11%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGL 86 D ++ + +A+ G I + + P V +D+++ + + ++ Sbjct: 30 FDPNRYKGLLIDWMREHKARTLAIDGPIGLSVFPRLEVTLRDVKLSEHRRPDEFAALQEA 89 Query: 87 SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW------------FQRKSTMDMI 134 ++ + +PLL + V + +N+ + G N + Sbjct: 90 TLAVQVMPLLKQRLAVDRVSARGVRVNYRRDADGRRNIDDLLSPATDAKDAPAANASSQA 149 Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 + I K + + D L+ SP+ + Sbjct: 150 LAFDISAIEFKDLQATVKDVPLGLDGRFVVKELRTGRLADGAESPIRFVGQAALAQPKLN 209 Query: 195 GNFDNK-RSAFKITANFPAKNKAISLKIQLFPLAY---PIIIDLFGNLFWNEKQPIYSGV 250 + + + + A PA L + L + + L G L ++ Sbjct: 210 ADVELTGQLKLSLPAGAPASVALRDLALSLRGDGFDVKQLDARLAGTLAYDGPSGALQAD 269 Query: 251 ---------------------FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 L L A +L+G +++ K Sbjct: 270 KLRLTLSGERLGVALKDSTVALDALRLDPPKRALRLDALDVKLTGQRGEDSVAAQLAWPK 329 Query: 290 LQS-ILPNSSTDEDNKTKVSQDEE 312 L+ + + + Sbjct: 330 LEVTGDTLNGSALKGSASLQGGPA 353 >gi|311745060|ref|ZP_07718845.1| putative membrane spanning protein, required for outer membrane integrity [Algoriphagus sp. PR1] gi|126577572|gb|EAZ81792.1| putative membrane spanning protein, required for outer membrane integrity [Algoriphagus sp. PR1] Length = 1001 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 48/384 (12%), Positives = 120/384 (31%), Gaps = 33/384 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGG-IKIHI-- 58 +++ LI +F V++ A P+ +++ V K+ + + I Sbjct: 1 MKKFLIITAGVFIVLIGAAIAFPILF-KDKIAARIDQEIAQSVNAKVLYDLDNVSLSIFR 59 Query: 59 -LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNF 114 P S ++ I ++ L + +L + + ++++ +L Sbjct: 60 SFPNISANIQEFGIVGNAPFETDTLVTLDELQIDFNLKSVLFDDYPTLTGVHLNGGNLYI 119 Query: 115 YLSSKGVSNWFQRKSTMDMIH-------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 + G +N+ + D + +++I + + D++ D L ++N Sbjct: 120 KVLQDGTANYDIMYPSTDTTAVAEESNMRIGIDQIEINHLNLVYDDRQLDYFMALGEINA 179 Query: 168 QISARFLNI--ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 Q + F + P+ ++++ V EGT NK + + + +L Sbjct: 180 QGNGEFTSDVYELPIELEALIAEVNYEGTSYLSNKNFSGETALTVDMEQMKFTL------ 233 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 GN N+ +G S+ + L+L K + + G + Sbjct: 234 --------GEGNFQLNDFIFGLTGFLSMPDEDIN-LDLAFEGKDNEFKSILSLVPG-IYS 283 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 + + K ++ + + S A+ M + + + Sbjct: 284 DSFSSLETSGTMDFQGNVKGVYNEQKFPSFDVSLKIADGMFKYQDLPKPVKNVNLDMQVL 343 Query: 346 LKKDDIQYSVNKKEEKDNSHDKEN 369 + D I + + Sbjct: 344 NETDQIDNTSISIPNFNLDFGSNP 367 >gi|121602232|ref|YP_988620.1| AsmA family protein [Bartonella bacilliformis KC583] gi|120614409|gb|ABM45010.1| AsmA family [Bartonella bacilliformis KC583] Length = 626 Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 36/271 (13%), Positives = 83/271 (30%), Gaps = 43/271 (15%) Query: 1 MLRRVLIGLGFLFSVVL----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 M +++ L +F V+ +P + R + + G + ++ ++ Sbjct: 1 MRAKIVKFLSGIFFAVVFLFGAAVIILPYIVSTDAIRIRLAQDLSAWTGYNVQLRDPPRL 60 Query: 57 HILPFPSVFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + P+P F + + QK +D + + E + + + LL + + I +P Sbjct: 61 DLFPYPKAFLSGVTLTQKIDDNAPLMEAESIEVDLSLIDLLWKRVSFSETRIIRPQFVIE 120 Query: 116 LSSKGVSNWFQRKSTMDMIHNVIL------------------------EKIHVKGGRIKI 151 K ++++F S + + ++ +K G + Sbjct: 121 KPVKTIADFFDTLSQSQGALGLTIRSAREVVMHNPDQPDVEHLLRQPFGRVVIKNGVLVY 180 Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP 211 D SD ++ LN + + ++ + + I A+ Sbjct: 181 RDSVSDVAEKITGLNATMDWPESTRAA-----------RFRANAHWRGELTELIINADQA 229 Query: 212 ---AKNKAISLKIQLFPLAYPIIIDLFGNLF 239 LKI + L I L Sbjct: 230 LLLLAGGKSPLKISMNSLRGGITFVGQAQLS 260 >gi|237815995|ref|ZP_04594992.1| AsmA family protein [Brucella abortus str. 2308 A] gi|237789293|gb|EEP63504.1| AsmA family protein [Brucella abortus str. 2308 A] Length = 646 Score = 89.9 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 35/338 (10%), Positives = 95/338 (28%), Gaps = 37/338 (10%) Query: 1 MLRR-VLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGI 54 M+R + L F ++ A VP + R ++ + G + ++ Sbjct: 1 MMRWPIFTRLIIAFVILCAAAAATLLAVVPFIVSTDAIRIRVAQEISAWTGYSVELRQAP 60 Query: 55 KIHILPFPSVFFKDIRID--QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112 ++ + P + + + + + + L + G I + I +PH+ Sbjct: 61 RLSVFPVLRASLSGVTLSKLTDQGQKPLMSADRIDVELSPLDAIMGHISFSETQIVRPHV 120 Query: 113 NFY-------------LSSKGVSNWFQRKSTMDMIHNVILEKIHVKG-----GRIKIIDQ 154 N +S G R + + GR+ + D Sbjct: 121 NLEAPVSNISQLLDAIANSNGRLGTAIRAQRALLQSGAKKNALAAGQASQPFGRVVVRDG 180 Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK- 213 S+ N+ + ++ + L + +G+ + + + F +T Sbjct: 181 TIAFNRAGSEPNVPHDKQITDVNATLEWPRTSSAATLKGSAKWRGEATQFSLTVAQALPL 240 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + + A P+ + G + + + G + L+ Sbjct: 241 LAGGTSDLTASLTANPLSLTFQGKANISRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGS 299 Query: 271 ------RLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 L+ + ++ + ++ + + Sbjct: 300 SEIGAFSLASTITATPKRLKFADVEMTANGSPVKGVIE 337 >gi|53712279|ref|YP_098271.1| outer membrane assembly protein [Bacteroides fragilis YCH46] gi|52215144|dbj|BAD47737.1| outer membrane assembly protein [Bacteroides fragilis YCH46] Length = 837 Score = 89.9 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 38/347 (10%), Positives = 96/347 (27%), Gaps = 43/347 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQAT----LIVGKKIAVKGGIKIH 57 +++ + V+L+ F +P FR E ++ + I Sbjct: 1 MKKGFKITAIVIGVILILMFLLPF-----AFRGKIEGIVKSEGNKMLNGHFDFS-SLDIS 54 Query: 58 I---LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPH 111 + P SV D + K ++ L + V + ++ Sbjct: 55 LFRNFPKASVTLNDFWLKGTGKFENDTLVKAGEVTAAINLFSLFGDDGYDVSKVSVENTR 114 Query: 112 LNFYLSSKGVSNWFQRKSTMDMIH-----------NVILEKIHVKGGRIKIIDQESDQVY 160 L+ + G +NW K + L++ +K + D++S Sbjct: 115 LHAIVLPDGKTNWDIMKPDSSTASETQESGESSTFRIKLQRFVIKNMNVVYDDRQSAMYA 174 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 + + N S + + LS+++ ++ + G ++ + A Sbjct: 175 DIHNFNALCSGDLGSDQTLLSLEAETEALTYKMNGIPFLSQANVYAKMDVDADLAHNKFT 234 Query: 221 IQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 ++ I + G + + + + K + + A Sbjct: 235 LKKNEFRLNAIKAGIDGWIELKDPAIDMDLKLNTSEIGFKEILSLIPA------------ 282 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + +K ++ + K + D + +M Sbjct: 283 ---IYSKEFKNLKTDGTATLEATAKGILQGDTIPQFDVRLAVKNAMF 326 >gi|120434613|ref|YP_860303.1| hypothetical protein GFO_0244 [Gramella forsetii KT0803] gi|117576763|emb|CAL65232.1| conserved hypothetical protein [Gramella forsetii KT0803] Length = 902 Score = 89.9 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 124/381 (32%), Gaps = 36/381 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-- 59 +++ L LGF+ +++ P + + ++ ++ + ++ K I + + Sbjct: 1 MKKALKILGFVILTIIILLIVAPFIFE-SQLKDLVKKTMNDNLNAQVDFK-DIDLSMFRS 58 Query: 60 -PFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSG---EIRVFDMYIDQPHLN 113 P ++ +D+ I E G + E +++ L ++ + +++ ++N Sbjct: 59 FPEATLVIEDLSIINNEPFKGDTLALGEEVTLEMSIKELFKSSEEPKKIDRLTLNKAYVN 118 Query: 114 FYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 + S G +N+ ++ ++ L+ + R+K D+ S + +L Sbjct: 119 IKVDSLGNANYDIAVEDTTTVSSNSESTPFSLDLKHYEINNSRVKYDDKSSKTSLDIENL 178 Query: 166 NLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 N + + F S L S S+ +G + +N + ++ Sbjct: 179 NHEGTGDFSLDQSELDTYSEALVSLNYDGVNYLNQNSLILDAVIQMDLENMKYTF-LENE 237 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS------AKKSRLSGNFKI 278 + + G + NE F K + + +G+F + Sbjct: 238 AKVNQLPLTFDGYVQVNENDTEMDVSFKTPSSDFKNFLAVIPEIYAKNIENVDTNGDFVL 297 Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD---LNETDFFE 335 + + I + + + + D LN+T E Sbjct: 298 NGR--IFGKTDDTFIPKMDIKITSSNASFKYPDLPK-----SVQDINLDMEILNDTGLAE 350 Query: 336 EEEKKNKNDDLKKDDIQYSVN 356 E N + D +++ N Sbjct: 351 ETYININNATFRIDQDRFTAN 371 >gi|91200055|emb|CAJ73097.1| hypothetical protein kuste2352 [Candidatus Kuenenia stuttgartiensis] Length = 868 Score = 89.9 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 44/376 (11%), Positives = 118/376 (31%), Gaps = 52/376 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R+++I L +F +L+ P ID +++ A + ++ +K+ ++ Sbjct: 1 MRKIIIILSSVFVFLLIAVIAAPFVIDLNKYKDRIITLAKPYLNREFDFA-DVKLTLISG 59 Query: 62 PSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V +RI ++ L ++ PLL +I++ + +D+P + +S Sbjct: 60 LGVEINGLRIADNPEFGSEDFLSLQSLRIKVALFPLLKKKIQIKKLIMDEPVVRLVRNSN 119 Query: 120 GVSNWF-----------------------------QRKSTMDMIHNVILEKIHVKGGRIK 150 GV N+ + +++ + + G+I Sbjct: 120 GVFNFSDMASDAEEDEKPQAKDEKRKEKKSGSEKKPDSEHNIFLAGLMVSQFTLHSGQIH 179 Query: 151 IID---QESDQVYFLSDLNLQISARFLNIISPLSIDS-----IKGSVIAEG-------TG 195 +D ++ LN+++ L + + + +++ +G Sbjct: 180 FLDNFVPDAPVTMVFDSLNIELKNVSLYKPIRIYASAGLQGTTEQNLLIKGMVGPVGDNM 239 Query: 196 NFDNKRSAFKITANFPAKNKAISL---KIQLFPLAYPIIIDLFGNLFWNEKQPIYS-GVF 251 + ++ +K + + L PL + + + + S Sbjct: 240 DLVGLAMDIHVSVQNVFLHKFVPYIPDGLMLSPLEGILYMTANIKGSVHSGLDLESVIQG 299 Query: 252 SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE 311 K + ++ L K D I +L L +++ + + Sbjct: 300 EKLVMSIKDSDEKIQNVNITLKEKIKYDDRKGDIGFQQLDLALNDNNVSLTGTIE-NIKT 358 Query: 312 ENLLNFSENGAESMHD 327 + + + + D Sbjct: 359 DPQWDVTLMAKMNALD 374 >gi|224826295|ref|ZP_03699397.1| AsmA family protein [Lutiella nitroferrum 2002] gi|224601396|gb|EEG07577.1| AsmA family protein [Lutiella nitroferrum 2002] Length = 717 Score = 89.9 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 95/306 (31%), Gaps = 16/306 (5%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81 + D RE R + + V+G IK H+LPFP + I I Q + + Sbjct: 30 LILWKFDEHAVRETLGRVLQEQ-HRNVTVRGAIKPHVLPFPGLDIDRIDISQPGNATPAI 88 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-KSTMDMIHNVILE 140 ++ L R +LPLL GE+ V + +D + + + V L+ Sbjct: 89 TVDHLEARLAWLPLLFGELEVSKLRVDGLKVQVVRHPDSSLSIADLFQRRDTGRFRVKLD 148 Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200 + ++ + +D+ + L+ L+L D ++G Sbjct: 149 TLRLRESELDYLDESTQHHQTLNTLSL-------------DADGLRGDAHLSVGALLSGG 195 Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL 260 R ++ P + + + ++ G N + F+ + Sbjct: 196 RRPLRLALETPLTIQDDQVTLSQLQAVVMSEVEGLGESKLNANG-LLRLNFAALQATGEQ 254 Query: 261 LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320 L L LS+ + ++ + + + + + E Sbjct: 255 LALTLSSDNPKSGFTLRVPAFSASFKEITTPLATLDGQLTYGQTHYEAVARFDNVKLDEA 314 Query: 321 GAESMH 326 G + H Sbjct: 315 GLNADH 320 >gi|160886925|ref|ZP_02067928.1| hypothetical protein BACOVA_04939 [Bacteroides ovatus ATCC 8483] gi|156107336|gb|EDO09081.1| hypothetical protein BACOVA_04939 [Bacteroides ovatus ATCC 8483] Length = 842 Score = 89.9 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 38/348 (10%), Positives = 93/348 (26%), Gaps = 43/348 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------ 55 +++ L V+++ F +P F+ K + + K Sbjct: 1 MKKGLKIAAITVGVIIILMFLLPF-----AFQGKIADIVKTEGNKMLNAQFDFKNLNISL 55 Query: 56 IHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112 P SV +D + + + ++ L + ++I+ L Sbjct: 56 FRNFPQASVTLEDFWLKGTGEFANDTLVQAGEVTAAVNLFSLFGDSGYDISKIFIEDTRL 115 Query: 113 NFYLSSKGVSNWFQRKST-------------MDMIHNVILEKIHVKGGRIKIIDQESDQV 159 + + G +NW K V L++ +K + DQ+ Sbjct: 116 HAIVLPDGRANWDIMKPDTTATAEAPVSEEEASSPFKVKLQRFVIKNMNLIYDDQQGKMY 175 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 + D N + + + L +++ S+ + G + T + A Sbjct: 176 ADIRDFNAVCAGDLGSDRTTLKLEAETKSLTYKMNGIPFLANANISATMDVDADLANNKY 235 Query: 220 KIQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278 ++ + I + G + + + K + + A Sbjct: 236 TLKDNTIRLNAIQAGIDGWVALKDPAIDMDLKLNTNDIGFKEILSLIPA----------- 284 Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + + + ++ K + D N +M Sbjct: 285 ----IYATEFSSLKTDGTATLTATAKGILQGDTVPAFNIDMQVKNAMF 328 >gi|298290613|ref|YP_003692552.1| AsmA family protein [Starkeya novella DSM 506] gi|296927124|gb|ADH87933.1| AsmA family protein [Starkeya novella DSM 506] Length = 614 Score = 89.9 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 44/372 (11%), Positives = 111/372 (29%), Gaps = 33/372 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++++ L L R + E +G++ A+ G + + P+ Sbjct: 1 MKKLVPILLLPIVAALAAGVVASRLATQERLRHEVETMVQAAIGRQPAITGDVSFSVFPW 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P++ + ID ++ + + LPLL+G + + L Sbjct: 61 PAIEVDGLAIDDP---RARLEVGEARIVLDLLPLLTGRASPDYIELTDADLTLADPGDST 117 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + ++V G +KI + + +++I R Sbjct: 118 KALGALITGLGTAE--SDADLYVTDGSVKIARGNGGE-MLIPQADMRIGWRGGRD----- 169 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL-KIQLFPLAYPIIIDLFGNLFW 240 V A+G + + + + + + + ++L P + G Sbjct: 170 -------VTAKGRATWRGEPLDIDLNLSGLSALASGGIGSLKLAVSGTPAELSFQGGARL 222 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRISRYKLQS 292 P+ +G +VA + L L+G+ ++S V + +++ Sbjct: 223 -AGGPVVTGTLAVASRQLRDALEWLDFDAPTERGFGAFALNGSAQLSAQGVVLGEARVEL 281 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 + D + + A DL+ + + + + D+ Sbjct: 282 ----DGNAGVGGFNLRFDGGRAI-VQGSLASEQLDLSPYGQLALSGGQGGSWNSEDIDLH 336 Query: 353 YSVNKKEEKDNS 364 + + S Sbjct: 337 RTRALDVDLRLS 348 >gi|239816072|ref|YP_002944982.1| hypothetical protein Vapar_3097 [Variovorax paradoxus S110] gi|239802649|gb|ACS19716.1| protein of unknown function DUF748 [Variovorax paradoxus S110] Length = 1275 Score = 89.6 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 28/270 (10%), Positives = 76/270 (28%), Gaps = 23/270 (8%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED 76 ++ VP + ++ A+ +G+++ V G I + D+RI + Sbjct: 27 VIAWLAVPPI-----AKSQLQKIASEKLGRQVTV-GKIDFKPW-TLELALNDLRIATADG 79 Query: 77 GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF---------QR 127 + ++ + AE +L + + ++ P + + G + Sbjct: 80 SRPQVAVKRIYADAELQSILRLAPVIDAVTVEAPAILLTHQADGKYDIDDILAKLAAGPP 139 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187 + I ++ G + DQ + + L L + Sbjct: 140 PDPKAEPARFAIYNISIRDGAVDFDDQTVKRRHELRGFVLNVP------FLSNLASKRDI 193 Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PIIIDLFGNLFWNEKQPI 246 + + + + A ++ +Q L P + + G L + Sbjct: 194 NTEPKLAFALNGSKFDSAALTTPFAASRKTDAHVQFKGLDLAPYLGYIPGGLPVQLQAGS 253 Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNF 276 + + + L+++ Sbjct: 254 LDADLKIDFEQAATAGLKITGTVEAHKAKL 283 Score = 52.6 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 72/280 (25%), Gaps = 29/280 (10%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 +V ++ + L + + L + ++ + P L +KG Sbjct: 275 TVEAHKAKLGDARGRD-LLGFDSLKLALADVRPLEAVFHLSEVALANPQLAVARDAKGQL 333 Query: 123 NWFQRKS-----------------------TMDMIHNVILEKIHVKGGRIKIIDQESDQV 159 N V ++K+ + GGRI D+ Sbjct: 334 NLLATDPATGAAEKVAKAPAAAASAPNGKAPEKPKLKVRVDKVALSGGRIGWRDETVQPA 393 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 + L + L + IA T F + +SL Sbjct: 394 AAIETTALGLDLTELTWPMEKPARFSGSTAIAGATLKFQGSATDKVAEVQTEVDALPLSL 453 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 + +D + F L L + G F++ Sbjct: 454 AAPYLAQSLEPTLDGKLSGQVEVAWAQPDLRFKARRVAVDGLALTQAKTALASVGRFELI 513 Query: 280 DGNVRISRYKLQSILPNSSTDEDN-KTKVSQDEENLLNFS 318 D ++++ L +S N K +V +D E F Sbjct: 514 DAEADMTKHTLDV----ASFTATNPKVQVERDSEKRWMFE 549 Score = 46.8 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 26/290 (8%), Positives = 69/290 (23%), Gaps = 50/290 (17%) Query: 49 AVKGGIKIHIL-PFPSVFFKDIRIDQ---KEDGSFESKIEGLSMRAEFLPLLSGEIRVFD 104 + G +++ P + + +D + + + + + + + V Sbjct: 469 KLSGQVEVAWAQPDLRFKARRVAVDGLALTQAKTALASVGRFELIDAEADMTKHTLDVAS 528 Query: 105 MYIDQPHLNFYLSSKGVSNW-----------------------------FQRKSTMDMIH 135 P + S+ + Sbjct: 529 FTATNPKVQVERDSEKRWMFERWLKTPAGNGGTAQAKAAAPKPAGAGPEAAPPGANTKPW 588 Query: 136 NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT- 194 + + + V G + D+ S + I+A L + + G Sbjct: 589 ALTIGTLAVDNGTLSYADKASATPVAVE-----ITAFSLKAQKVAPETATVSPLQVSGRI 643 Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLF---PLAYPIIIDLFGNLFWNEKQPIYSGVF 251 G+ ++ F N K + ++++ A+ N+ Y G Sbjct: 644 GSRRSEPGRFDYKGNVVLKPLSAEGRLEVASFPAHAFKAYYADALNVDIRRAFASYKGTV 703 Query: 252 SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 A + +L+G+ + D ++ Sbjct: 704 RYASA--------PAGMTIKLAGDTALDDFRANSISLTQSPGFDRNTNQL 745 >gi|228471627|ref|ZP_04056401.1| AsmA family protein [Capnocytophaga gingivalis ATCC 33624] gi|228277046|gb|EEK15732.1| AsmA family protein [Capnocytophaga gingivalis ATCC 33624] Length = 896 Score = 89.6 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 54/377 (14%), Positives = 116/377 (30%), Gaps = 27/377 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI--- 58 +++ G + V+++ +P +E + V +I+ + + Sbjct: 1 MKKFFKIFGIIVLVLILLLVCIPFLF-KNTIKEKIMEKVNESVNAQISFT-DFSLSVFKN 58 Query: 59 LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLL----SGEIRVFDMYIDQPHL 112 P +V + +++ G + + S + +L ++ + + Sbjct: 59 FPNATVELEGLKVINNAPFAGDTLAYVGNFSAKVNLKDILFKGDKDPYKLLGFSLSNAVV 118 Query: 113 NFYLSSKGVSNWFQRKSTMDMIHN------VILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 N +++ +G N+ KST D + L++ ++ R D S L L Sbjct: 119 NVHMNEEGKGNFDIAKSTSDTTDEEPNNFSLDLKEYSIENLRFTFRDDTSKMSVILDSLY 178 Query: 167 LQISARFLNIISPLS-IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 + F N + L + K S ++GT N + +LK Sbjct: 179 HKGKGNFANQVLDLETTTATKVSFASDGTAFLRNNVVTLDAVLGIDLNQQKYTLK-DNTL 237 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + ++ G + E +Y+ F F L+L +A + G + + Sbjct: 238 KLNALELNFDGFVQLLEDGQLYNLSFKTPKTTFKNFLDLIPAAYTKSIEGVQTTGEFTIN 297 Query: 285 I---SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL-NETDFFEEEEKK 340 +Y +I N S + + NET+ E+ Sbjct: 298 GKVDGKYTPTTIPKLDIRMLSNNASFKYPSLPK---SVKNIDIDVKIGNETEKLEDTYVN 354 Query: 341 NKNDDLKKDDIQYSVNK 357 D +SV Sbjct: 355 INRFAFTIDQDAFSVKA 371 >gi|298385033|ref|ZP_06994592.1| outer membrane assembly protein [Bacteroides sp. 1_1_14] gi|298262177|gb|EFI05042.1| outer membrane assembly protein [Bacteroides sp. 1_1_14] Length = 838 Score = 89.6 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 38/377 (10%), Positives = 102/377 (27%), Gaps = 36/377 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-- 59 +++ L + V+++ +P + + ++ + K + I + Sbjct: 1 MKKGLKIAAIVVGVIIILMLLLPFAFQ-GKIAGIVKTEGNKMLNAQFDFK-KLNISLFRN 58 Query: 60 -PFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFY 115 P SV +D + + + ++ L + ++I+ L+ Sbjct: 59 FPQASVTLEDFWLKGAGEFANDTLVQAGEVTATINLFSLFGDSGYDISKVFIEDTRLHAI 118 Query: 116 LSSKGVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 + G NW V L++ +K + DQ+S + Sbjct: 119 VLPDGHVNWDIMKPDTTDTQETPATEEESSPFKVKLQRFVIKNMNLIYDDQQSKMYADIR 178 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 D N + + + L +++ S+ + G + + A ++ Sbjct: 179 DFNALCAGDLGSDRTTLKLEAETKSLTYKMNGIPFLANANISAKMDVDADLANNKYTLKD 238 Query: 224 FPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 + I + G + + + K + + A Sbjct: 239 NTIRLNAIQAGIDGWVELKDPAIDMDLKLNTNDVGFKEILSLIPA--------------- 283 Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342 + + + ++ K + D N +M ++ N Sbjct: 284 IYATEFSSLKTDGTATLAASAKGTLQGDTVPAFNIDMQVKNAMFRYPALPAGVDQININA 343 Query: 343 NDDLKKDDIQYSVNKKE 359 N +I + + Sbjct: 344 NVRNPGGNIDLTSIQIN 360 >gi|254482278|ref|ZP_05095519.1| AsmA family protein [marine gamma proteobacterium HTCC2148] gi|214037603|gb|EEB78269.1| AsmA family protein [marine gamma proteobacterium HTCC2148] Length = 623 Score = 89.6 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 47/381 (12%), Positives = 121/381 (31%), Gaps = 30/381 (7%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M R +L + +V+V A +P+ +D + + G +++V GG + I P Sbjct: 1 MPRILLYIILAPLILVIVAALLIPVMVDEEKMLQLAADEVRKQTGAELSVLGGADLRIFP 60 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + D+ +D D + L++ E +PLLS E+ + + +D + + Sbjct: 61 TLGLALADVSLDMPSDQQPSLQARSLNIGVELIPLLSKEVAIETIELDGVVIKMTTEPEA 120 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQES-DQVYFLSDLNLQISARFLNIISP 179 + + + + + R + + L +L I+ + + Sbjct: 121 APIDTSKLNDKQLGEFYAKRQADIDEARQAASTEAAVAVPLALEVASLSITDSRIEMTEV 180 Query: 180 LSIDSIKGSVIAEGTG-NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 SI + +G N + + + + P+++ G++ Sbjct: 181 GGDTSIIEIDNLKVSGLNLEGRSIPLEGSVILAGDE--------------PLVVMFNGSV 226 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 +++ + + L SG ++ L+ + Sbjct: 227 VVSQETQM----LGIEEMDLTLKGALAETVALNTSGEVDMNRQVA-----DLKLVATIGD 277 Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358 T D + + + E ++ + + + + + + + + Sbjct: 278 TRADGQLRYAAFESPQID-----TQLRLNQFTPALLALAGPEAADTKPVQPSPEEAEDTP 332 Query: 359 EEKDNSHDKENQENFSGDKMI 379 D + + + S DK+I Sbjct: 333 LPLDALRVIDTRADLSIDKVI 353 >gi|239909045|ref|YP_002955787.1| hypothetical protein DMR_44100 [Desulfovibrio magneticus RS-1] gi|239798912|dbj|BAH77901.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 1244 Score = 89.2 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 35/266 (13%), Positives = 80/266 (30%), Gaps = 21/266 (7%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKI 83 I RE ++ T +G+ + G + I + P+ + + + Q Sbjct: 38 IIGPQRLREMAQKALTDALGRDTVLSGDVSITLTPWLGLSMGPVAVAQAPGFGDDPMFAA 97 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH------NV 137 + M PLL+ I + ++ ++ G +NW + D Sbjct: 98 RKVEMTIRMAPLLAKVISPGSVRARDVTVHLARAADGRTNWDDLAAPQDAQAGSGWTVVP 157 Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197 +H+ ++ D + +V ++ L+ L + ++ G Sbjct: 158 QPRAVHLDNVAVRYDDAATGKVLSVTGARLRTG---LGQPFDFAASFEAMGLVPNGQLQC 214 Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL---FGNLFWNEKQPIYSGVFSVA 254 + + L + + ++ID G + + Sbjct: 215 -------HLQGRASFDPGSGRLGLHGVRVESGLVIDAPLVPGGAVPTRVVSRLILDYDAS 267 Query: 255 GDFSKLLNLELSAKKSRLSGNFKISD 280 L +++ A RL+G +SD Sbjct: 268 AAALTLSDIDARADGLRLTGTAGVSD 293 >gi|319898417|ref|YP_004158510.1| AsmA family [Bartonella clarridgeiae 73] gi|319402381|emb|CBI75920.1| AsmA family [Bartonella clarridgeiae 73] Length = 626 Score = 89.2 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 59/417 (14%), Positives = 125/417 (29%), Gaps = 65/417 (15%) Query: 1 MLRRVLIGLGFLFSVVL----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 M +++ L +F ++ P + R + ++ G + ++ ++ Sbjct: 1 MCIKIIKFLSGIFIAIVSLGGAAVIIFPYIVSTDAIRIRLAQDLSVWTGYNVQLRDPPRL 60 Query: 57 HILPFPSVFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 I P+P F + + K E + ++E + + + LL G I + + P Sbjct: 61 KIFPYPKAFLSGVTLTPKIESIAPLMEVESIEVDLSLVSLLGGHISFSETRVMYPKFVMD 120 Query: 116 LSSKGVSNWFQR-------------------KSTMDMIHNVIL-----EKIHVKGGRIKI 151 K +S++F K D L +I ++ G + Sbjct: 121 KPVKTISDFFDTLLRSQGALGLAIQSAREIIKHNPDNPDVASLLNQPFGRIVIENGTLIY 180 Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP 211 D SD + ++ LN + + + +V + + + I A+ Sbjct: 181 RDGISDVMEKITGLN-----------ASIDWPGLTQAVQFRAKARWHGELTELLINADQA 229 Query: 212 ---AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268 SLK+ + I L + I+ G S+ F Sbjct: 230 LFLLAGGKSSLKVSFNSVRGGITFKGQAQLS---EYYIFDGKLSLR--FPGWDQTVAWIG 284 Query: 269 KSRLSGN-----------FKISDGNVRISRYKLQSILPNS----STDEDNKTKVSQDEE- 312 ++ GN F +R++ N+ D N V Sbjct: 285 GNQFWGNGLKIPIVWESHFLAQPARIRMNNIIFTIGTANARGALEFDFKNHVPVLIGSLG 344 Query: 313 -NLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 + L+F+ + E +FF+ D++ Q + D + + Sbjct: 345 FDKLDFNILKSLFFCSEKENEFFDVAFLNRIGLDIRLSAPQAKIGDIGLTDLAAAIQ 401 >gi|92119068|ref|YP_578797.1| AsmA [Nitrobacter hamburgensis X14] gi|91801962|gb|ABE64337.1| AsmA [Nitrobacter hamburgensis X14] Length = 640 Score = 89.2 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 91/297 (30%), Gaps = 28/297 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + I ++ + + I + + G +IA+ G I + P Sbjct: 1 MGALKIAGVAATCLIAIAIVLLVTGIPSGFVTSLVQDRIERETGYRIAINGKTGIGLWPS 60 Query: 62 PSVFFKDIRIDQKEDGSFES--KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 S+ ++ ++ + + + + + F LLSG +V D+ ID L L + Sbjct: 61 FSLALHNVTLENPKTTATDVHIAVGEVRAALPFASLLSGAPKVSDLTIDHATLRLPLLRE 120 Query: 120 G-VSNWFQRKSTMDMIH----NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + ++++ + G I D ++ + D+N ++ Sbjct: 121 RTRIDIPPGPDHSGDTSEDDTPFPIDRVTISNGTIVFFDPQTSSEGRVGDVNASVTLSTD 180 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 + G N F I A PA + + + +D+ Sbjct: 181 R------------QINVTGNARPGNHSLKFGIKATPPA------GPLGRQNIPTELTLDV 222 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 G ++ + G + L S + +G + + + + L Sbjct: 223 PG---LPTRELTAKAEVRINGRMLLINGLSGSLNDGKFNGWASVDLASKPLVKLDLD 276 >gi|254702324|ref|ZP_05164152.1| AsmA family protein [Brucella suis bv. 5 str. 513] Length = 645 Score = 89.2 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 30/311 (9%), Positives = 87/311 (27%), Gaps = 31/311 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79 VP + R ++ + G + ++ ++ + P + + + Sbjct: 27 VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126 + + + L + G I + I +PH+N +S G Sbjct: 87 LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146 Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 R + + GR+ + D S+ N+ + ++ + L Sbjct: 147 RAQRALLQSGANKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240 + +G+ + + + F +T + + A P+ + G Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291 + + + G + L+ L+ + ++ + ++ Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325 Query: 292 SILPNSSTDED 302 + + + Sbjct: 326 ANGSPAKGVIE 336 >gi|306843024|ref|ZP_07475651.1| AsmA family protein [Brucella sp. BO2] gi|306286816|gb|EFM58357.1| AsmA family protein [Brucella sp. BO2] Length = 646 Score = 89.2 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 34/338 (10%), Positives = 94/338 (27%), Gaps = 37/338 (10%) Query: 1 MLRR-VLIGLGFLFSVVLVGAFTV-----PLFIDWTDFREDFERQATLIVGKKIAVKGGI 54 M+R + L F ++ A P + R ++ + G + ++ Sbjct: 1 MMRWPIFTRLIIAFVILCAAAVATLLAVVPFIVSTDAIRIRVAQEISAWTGYSVELRQAP 60 Query: 55 KIHILPFPSVFFKDIRID--QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112 ++ + P + + + + + + L + G I + I +PH+ Sbjct: 61 RLSVFPVLRASLSGVTLSKLTDQGQKPLMSADRIDVELSPLDAIMGHISFSETQIVRPHV 120 Query: 113 NFY-------------LSSKGVSNWFQRKSTMDMIHNVILEKIHVKG-----GRIKIIDQ 154 N +S G R + + + GR+ + D Sbjct: 121 NLEAPVSNISQLLDAIANSNGRLGTAIRAQRALLQSSAKKNALAAGQASQPFGRVVVRDG 180 Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK- 213 S+ N+ + ++ + L + +G+ + + + F +T Sbjct: 181 TIAFNRAGSEPNVPHDKQITDVNATLEWPRTSSAATLKGSAKWRGEATQFSLTVAQALPL 240 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270 + + A P+ + G + G + L+ Sbjct: 241 LAGGTSDLTASLTANPLSLTFQGKANI-SGDRFFEGRLTAKTPSLSGAVHWLNLPPIAGS 299 Query: 271 ------RLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 L+ + ++ + ++ + + + Sbjct: 300 SEIGAFSLASTITATPKRLKFADVEMTANGSPAKGVIE 337 >gi|255531390|ref|YP_003091762.1| hypothetical protein Phep_1486 [Pedobacter heparinus DSM 2366] gi|255344374|gb|ACU03700.1| hypothetical protein Phep_1486 [Pedobacter heparinus DSM 2366] Length = 1027 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 45/379 (11%), Positives = 103/379 (27%), Gaps = 33/379 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-- 59 +++V G +L+ P + +R + ++ KG + + Sbjct: 1 MKKVFKITGISLCTLLLLLLVTPYLFQ-DTISREVQRSINKSIKGEVKFKG-VGLSFFRH 58 Query: 60 -PFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 P ++ + + LS R + S +I++ ++D+ +N + Sbjct: 59 FPSLTLNLDQFMLKGAAPFEKDTLLYSKALSFRVNLATVFSEQIKIDQFFLDEAVINVEV 118 Query: 117 SSKGVSNWF-------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 KG +N+ + +T + +E I + ++ D+ + +DLN Sbjct: 119 DEKGRANYDVYESKAKEGGATDTTATAIKIEGIFINKSKLTYNDRSVPMLISAADLNYAG 178 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-LFPLAY 228 I LS + GS+ ++ L Sbjct: 179 KGDLSKAIFDLSSKAEIGSLDVYYNNEPYLLNKKINARLVTKINTNSLDLMFDENDLKIN 238 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 + I G + E + +A ++ + ++ Sbjct: 239 SLPIHFVGRFSFIEGGYDIKFRTKAKETDL---HNIFTALPPAIAERMEKTNIK------ 289 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 K ++ L+F+ E ++ E K N K Sbjct: 290 ----GYAEIKASLIGKYLAGKNIMPTLSFNLKIREGE--ISNPKAPEPISKLYINLQTKL 343 Query: 349 DDI---QYSVNKKEEKDNS 364 + +N N Sbjct: 344 PSLNPDSLYINMDSLYFNI 362 >gi|153807485|ref|ZP_01960153.1| hypothetical protein BACCAC_01765 [Bacteroides caccae ATCC 43185] gi|149129847|gb|EDM21059.1| hypothetical protein BACCAC_01765 [Bacteroides caccae ATCC 43185] Length = 840 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 38/376 (10%), Positives = 98/376 (26%), Gaps = 42/376 (11%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------ 55 +++ L V+++ +P F+ K + + K Sbjct: 1 MKKGLKIAAITVGVIIILMLLLPF-----AFQGKIADIVKTEGNKMLNAQFDFKKLNISL 55 Query: 56 IHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112 P SV +D + + + ++ L + ++I+ L Sbjct: 56 FRNFPQASVTLEDFWLKGTGEFANDTLVQAGEVTAAINLFSLFGDSGYDISKIFIEDTKL 115 Query: 113 NFYLSSKGVSNW------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 + + G +NW V L++ +K + DQ+ Sbjct: 116 HAIVLPDGRANWNIMEPDTTASAETPAAEEESSPFKVKLQRFVIKNMNLIYDDQQGKMYA 175 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 + D N + + + L +++ S+ + G + + A Sbjct: 176 DIQDFNATCAGDLGSERTTLKLEAETKSLTYKMNGIPFLANANISAEMDVDADLANNKYT 235 Query: 221 IQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 ++ + I + G + + + K + + A Sbjct: 236 LKDNTIRLNAIQAGIDGWVALKDPAIDMDLKLNTNDIGFKEILSLIPA------------ 283 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339 + + + ++ + K + D N +M ++ Sbjct: 284 ---IYATEFSSLKTDGTATLNATAKGTLLGDTVPAFNVDMQVKNAMFRYPALPAGVDQIN 340 Query: 340 KNKNDDLKKDDIQYSV 355 N N +I + Sbjct: 341 INANVQNPGGNIDLTT 356 >gi|306844609|ref|ZP_07477196.1| AsmA family protein [Brucella sp. BO1] gi|306275053|gb|EFM56816.1| AsmA family protein [Brucella sp. BO1] Length = 645 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 35/337 (10%), Positives = 93/337 (27%), Gaps = 37/337 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAF------TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55 +R L + V+L A VP + R ++ + G + ++ + Sbjct: 1 MRWPLFTRLIIAFVILCAAAAATLLAVVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPR 60 Query: 56 IHILPFPSVFFKDIRID--QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113 + + P + + + + + + L + G I + I +PH+N Sbjct: 61 LSVFPILRASLSGVTLSKLTDQGQKPLMSADRIDVELSPLDAIMGHISFSETQIVRPHVN 120 Query: 114 FY-------------LSSKGVSNWFQRKSTMDMIHNVILEKIHVKG-----GRIKIIDQE 155 +S G R + + GR+ + D Sbjct: 121 LEAPVSNISQLLDAIANSNGRLGTAIRAQRALLQSGAKKNALAAGQASQPFGRVVVRDGT 180 Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-N 214 S+ N+ + ++ + L + +G+ + + + F +T Sbjct: 181 IAFNRAGSEPNVPHDKQITDVNATLEWPRTSSAATLKGSAKWRGEATQFSLTVAQALPLL 240 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270 + + A P+ + G + G + L+ Sbjct: 241 AGGTSDLTASLTANPLSLTFQGKANI-SGDRFFEGRLTAKTPSLSGAVRWLNLPPIAGSS 299 Query: 271 -----RLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 L+ + ++ + ++ + + + Sbjct: 300 EIGAFSLASTITATPKRLKFADVEMTANGSPAKGVIE 336 >gi|265762470|ref|ZP_06091038.1| outer membrane assembly protein [Bacteroides sp. 2_1_16] gi|263255078|gb|EEZ26424.1| outer membrane assembly protein [Bacteroides sp. 2_1_16] Length = 837 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 38/347 (10%), Positives = 97/347 (27%), Gaps = 43/347 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQAT----LIVGKKIAVKGGIKIH 57 +++ + V+L+ F +P FR E ++ + I Sbjct: 1 MKKGFKITAIVIGVILILMFLLPF-----AFRGKIEGIVKSEGNKMLNGHFDFS-SLDIS 54 Query: 58 I---LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPH 111 + P SV D + + K ++ L + V + ++ Sbjct: 55 LFRNFPKASVTLNDFWLKGTGEFENDTLVKAGEVTAAINLFSLFGDDGYDVSKVSVENTR 114 Query: 112 LNFYLSSKGVSNWFQRKSTMDMIH-----------NVILEKIHVKGGRIKIIDQESDQVY 160 L+ + G +NW K + L++ +K + D++S Sbjct: 115 LHAIVLPDGKTNWDIMKPDSSTASETQESGESSTFRIKLQRFVIKNMNVVYDDRQSAMYA 174 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 + + N S + + LS+++ ++ + G ++ + A Sbjct: 175 DIHNFNALCSGDLGSDQTLLSLEAETEALTYKMNGIPFLSQANVYAKMDVDADLAHNKFT 234 Query: 221 IQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 ++ I + G + + + + K + + A Sbjct: 235 LKKNEFRLNAIKAGIDGWIELKDPAIDMDLKLNTSEIGFKEILSLIPA------------ 282 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + +K ++ + K + D + +M Sbjct: 283 ---IYSKEFKNLKTDGTATLEATAKGILQGDTVPQFDVRLAVKNAMF 326 >gi|115522929|ref|YP_779840.1| AsmA family protein [Rhodopseudomonas palustris BisA53] gi|115516876|gb|ABJ04860.1| AsmA family protein [Rhodopseudomonas palustris BisA53] Length = 617 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 96/280 (34%), Gaps = 12/280 (4%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE-- 84 I + Q G +++V+G +I + P P V +D+ +D+ + G ++ Sbjct: 26 IPAGWMTSAMQSQLARDTGLRVSVQGTTRIALWPAPRVTLQDVVLDRPDAGERSVRLNVV 85 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-IHNVILEKIH 143 + F L SG ++ ++ + QP L L + + T E++ Sbjct: 86 RIEAGVPFAALWSGTPQLTELTLTQPVLQVPLLRERRAAPAAPAPTPSNVFSMPSFERLR 145 Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQIS-ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202 + G + + + + + ++ ++ A + S + E T + Sbjct: 146 IVDGAVVLSNPQDKVERRIDGISADLAMAEDRRVTGTGSATFGAHPLGFEFTAT---APA 202 Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262 + P + + + L + L G + SG F G F+ + Sbjct: 203 TLGGRESVPVEFSLTAPTLLTSALTSKAELKLNGTVLMING---LSGSFG-GGAFNGWGS 258 Query: 263 LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 +L A K +L + + ++ + P S T D Sbjct: 259 ADL-AGKPQLKLDLDFQKLALPGTKADARPDAPWSETTFD 297 >gi|256114175|ref|ZP_05454929.1| AsmA family protein [Brucella melitensis bv. 3 str. Ether] Length = 645 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 29/311 (9%), Positives = 86/311 (27%), Gaps = 31/311 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79 VP + R ++ + G + ++ ++ + P + + + Sbjct: 27 VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126 + + + L + G I + I +PH+N +S G Sbjct: 87 LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146 Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 R + + GR+ + D S+ N+ + ++ + L Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAVNRAGSEPNVPHDKQITDVNATLE 206 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240 + +G+ + + + F +T + + P+ + G Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTTNPLSLTFQGKANI 266 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291 + + + G + L+ L+ + ++ + ++ Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325 Query: 292 SILPNSSTDED 302 + + + Sbjct: 326 ANGSPAKGVIE 336 >gi|294852918|ref|ZP_06793591.1| AsmA protein [Brucella sp. NVSL 07-0026] gi|294821507|gb|EFG38506.1| AsmA protein [Brucella sp. NVSL 07-0026] Length = 645 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 35/338 (10%), Positives = 97/338 (28%), Gaps = 36/338 (10%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79 VP + R ++ + G + ++ ++ + P + + + Sbjct: 27 VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126 + + + L + G I + I +PH+N +S G Sbjct: 87 LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146 Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 R + + GR+ + D S+ N+ + ++ + L Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240 + +G+ + + + F +T + + A P+ + G Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291 + + + G + L+ L+ + ++ + ++ Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 + + + ++ ++E + A DLN Sbjct: 326 A----NGSPAKGVIEIGLEQEQP-AVTGTLAFEKLDLN 358 >gi|163843856|ref|YP_001628260.1| AsmA family protein [Brucella suis ATCC 23445] gi|163674579|gb|ABY38690.1| AsmA family protein [Brucella suis ATCC 23445] Length = 645 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 30/311 (9%), Positives = 88/311 (28%), Gaps = 31/311 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79 VP + R ++ + G + ++ ++ + P + + + Sbjct: 27 VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126 + + + L + G I + I +PH+N +S G Sbjct: 87 LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146 Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 R + + GR+ + D S+ N+ + ++ + L Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240 + +G+ + + + F +T + + A P+ + G + Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKVNI 266 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291 + + + G + L+ L+ + ++ + ++ Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325 Query: 292 SILPNSSTDED 302 + + + Sbjct: 326 ANGSPAKGVIE 336 >gi|37522996|ref|NP_926373.1| hypothetical protein glr3427 [Gloeobacter violaceus PCC 7421] gi|35213999|dbj|BAC91368.1| glr3427 [Gloeobacter violaceus PCC 7421] Length = 1210 Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 106/354 (29%), Gaps = 15/354 (4%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+R LIG + G VPLF+D FR+ + + +G+ + + G +++ L Sbjct: 24 LQRTLIGAAGVGLASFAGLALVPLFVDGESFRKPLQEALSRSLGRDV-LLGRVELRTLGG 82 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + + +R+ +E S + G + LPLL +I V ++ ID + G Sbjct: 83 IGLRTEQVRVVNREGTSE-LQARGAFVELALLPLLVRQIEVRNIEIDGAEIYLKRFRDGR 141 Query: 122 SNWFQR---KSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLNLQISARFLNI 176 N + + N+ + + ++ D+ + Q + S L+L++ +F Sbjct: 142 WNVADLGDGQGAGEGPVNLAGTGLTLFDSTVRFDDEGVQPPQRFLASALSLKV-QKFDRA 200 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 P+++ + +A + K+ Sbjct: 201 ELPINLQGRIVNA-----LRDKPVATALTLDGTLAWPEDGDWQKLTGNLRILAEKFRPRY 255 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 + P +G+ V RL G Sbjct: 256 LSAYTRDIPSLAGLTGVFDLDFVWKGALGGES--RLEGTCGTRLLRWDWPLLFGGRPWLA 313 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350 D VS +G D+ + E + DL Sbjct: 314 RKVKVDTAMGVSSAGVRAERLRLSGEGFDADIQGSVRRPTGESPSPLLDLTVKT 367 >gi|148559550|ref|YP_001259474.1| AsmA family protein [Brucella ovis ATCC 25840] gi|148370807|gb|ABQ60786.1| AsmA family protein [Brucella ovis ATCC 25840] Length = 645 Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 30/311 (9%), Positives = 87/311 (27%), Gaps = 31/311 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79 VP + R ++ + G + ++ ++ + P + + + Sbjct: 27 VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126 + + + L + G I + I +PH+N +S G Sbjct: 87 LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146 Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 R + + GR+ + D S+ N+ + ++ + L Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240 + +G+ + + + F +T + + A P+ + G Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291 + + + G + L+ L+ + ++ + ++ Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325 Query: 292 SILPNSSTDED 302 + + + Sbjct: 326 ANGSPAKGVIE 336 >gi|37519806|ref|NP_923183.1| hypothetical protein glr0237 [Gloeobacter violaceus PCC 7421] gi|35210797|dbj|BAC88178.1| glr0237 [Gloeobacter violaceus PCC 7421] Length = 1092 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 42/349 (12%), Positives = 96/349 (27%), Gaps = 25/349 (7%) Query: 3 RRVLIGLGFLFSVV---LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59 R +I L +V + VPLF+D R+ E + +++ + G +++ L Sbjct: 14 RWAIISLAATVGLVGAGVTALALVPLFVDSDGLRKPLEEAIAQTLRRRVRL-GKLQVQTL 72 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + + + + + PLLS ++ + + ++ L + Sbjct: 73 GGIGLRADRVELFNLRGSEKQLDARSVFVEVDLWPLLSRQVVLKRLEFERLDLALQRNPA 132 Query: 120 GVSNWFQRKSTMDMIHNVILEK----IHVKGGRIKIIDQESDQVYFLS----DLNLQISA 171 G N + + + +++ DQ + L +L+ Sbjct: 133 GQWNVADLLTAQGPDGPGQTGYSGPAVSLVDSTVRVTDQTQNPPRQLRLSNVAFDLRPQN 192 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNF----DNKRSAFKITANFPAKNKAISLKIQLFPLA 227 + I+ K + GT ++ + + P Sbjct: 193 PYDLDITFKGDLGEKTPLAVAGTIELPKGDPAAAWGGELRLQTQQLAADQVVGLLGQPAL 252 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL----SAKKSRLSGNFKISDGNV 283 + ++ W Q G + A+ L G+ V Sbjct: 253 AGLKGLFDLDVRWELSQDQLEGKVKAQALAWLWPEVWGKTAWKARSVDLDGDLTFGPQQV 312 Query: 284 RISRYKLQSILPNSSTDEDNKTKV-SQDEENLLNFSENGAESMHDLNET 331 + R +L+ D K + + N D Sbjct: 313 AVERLQLKLP----ELTADAKGTLPRFFNQPGQALDLNVKTGEFDPFTA 357 >gi|224826410|ref|ZP_03699512.1| protein of unknown function DUF748 [Lutiella nitroferrum 2002] gi|224601511|gb|EEG07692.1| protein of unknown function DUF748 [Lutiella nitroferrum 2002] Length = 1123 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 50/332 (15%), Positives = 109/332 (32%), Gaps = 33/332 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR +G ++ ++ + R A G+K+++ G +KI Sbjct: 24 RRWPYWVGGGALALVAASWGALAWGVPDVARHAAADWAQGK-GQKLSI-GTMKIEPW-SM 80 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 V D+R+ + L + AE L G R +D+P +++G Sbjct: 81 KVELGDVRLAEGNGA-PLFAARRLVLDAEPTALFIGRWRAALFQLDKPQWFVERNAQGEW 139 Query: 123 NWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV--YFLSDLNLQI 169 NW + + ++L+ + + GG ++++D + + L +NL + Sbjct: 140 NWARFVKAVSGPAKPATESKGELPKLVLDLLQLNGGEVRMVDHFGGETRAFDLKPVNLTL 199 Query: 170 S-----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 + + + +G +S+ + + +Q F Sbjct: 200 KELSTLPVDGGSYTLTAELGDGAKLAWKGNVGLQPLQSSGEARLDKLTLASLWPY-VQPF 258 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK----KSRLS------G 274 P +L + + + VA + L L L+A L G Sbjct: 259 FHTAPPQGELAASARYQFDLSGKTPQLKVAPFNATLNRLHLAAPGGGSALALKQLALEGG 318 Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 F ++ +V I+R +L ++ + + Sbjct: 319 RFDLASSSVDITRLRLSDGELSAQRNGAGQLD 350 >gi|60680457|ref|YP_210601.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343] gi|60491891|emb|CAH06650.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343] Length = 837 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 38/347 (10%), Positives = 97/347 (27%), Gaps = 43/347 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQAT----LIVGKKIAVKGGIKIH 57 +++ + V+L+ F +P FR E ++ + I Sbjct: 1 MKKGFKITAIVIGVILILMFLLPF-----AFRGKIEGIVKSEGNKMLNGHFDFS-SLDIS 54 Query: 58 I---LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPH 111 + P SV D + + K ++ L + V + ++ Sbjct: 55 LFRNFPKASVTLNDFWLKGTGEFENDTLVKAGEVTAAINLFSLFGDDGYDVSKVAVENTR 114 Query: 112 LNFYLSSKGVSNWFQRKSTM-----------DMIHNVILEKIHVKGGRIKIIDQESDQVY 160 L+ + G +NW K + L++ +K + D++S Sbjct: 115 LHAIVLPDGKTNWDIMKPDSSTAGETQESGESSTFRIKLQRFVIKNMNVVYDDRQSAMYA 174 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 + + N S + + LS+++ ++ + G ++ + A Sbjct: 175 DIHNFNALCSGDLGSDQTLLSLEAETEALTYKMNGIPFLSQANVYAKMDVDADLAHNKFT 234 Query: 221 IQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 ++ I + G + + + + K + + A Sbjct: 235 LKKNEFRLNAIKAGIDGWIELKDPAIDMDLKLNTSEIGFKEILSLIPA------------ 282 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + +K ++ + K + D + +M Sbjct: 283 ---IYSKEFKNLKTDGTATLEATAKGILQGDTVPQFDVRLAVKNAMF 326 >gi|119897585|ref|YP_932798.1| hypothetical protein azo1294 [Azoarcus sp. BH72] gi|119669998|emb|CAL93911.1| conserved hypothetical membrane protein [Azoarcus sp. BH72] Length = 1307 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 87/289 (30%), Gaps = 21/289 (7%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPS 63 + + + F +++ F +P + +R + E T +G +A++ + P Sbjct: 35 LCVWIAFAALFLVLREFVLP---NVDAYRAEVEAGLTEALGAPVAIE-HLSGDWSGMRPR 90 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 + + + E ++E + +L L + ID P + + G Sbjct: 91 LHLTGLALRDAEG-RPALRLERVDATLGWLSLAQLRPFFHRLEIDGPDVAITRRADGRLE 149 Query: 124 WFQRKSTMDMI------HNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNI 176 + +I V+ + D+ LS + ++ F Sbjct: 150 IAGMTMDDGPSDGSFLDWLLAQRQIVVRDAALTWTDELRGAPPLRLSQVQFRLERSFHRH 209 Query: 177 ISPLSI---DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 L + ++ G ++ L + YP+ + Sbjct: 210 RFALQAQPPAQLASALDLRGELQQLVPQTPAASVGKLYVALDHADLGGWRQWVDYPVALS 269 Query: 234 LFGNLFWN-----EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 G L + + + S+AG ++L + + +RL G Sbjct: 270 GSGGLRAWIDLEADGRQAITTDVSLAGVETRLGDSLPVLQLARLGGRLT 318 >gi|256061653|ref|ZP_05451792.1| AsmA family protein [Brucella neotomae 5K33] Length = 645 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 30/311 (9%), Positives = 87/311 (27%), Gaps = 31/311 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79 VP + R ++ + G + ++ ++ + P + + + Sbjct: 27 VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126 + + + L + G I + I +PH+N +S G Sbjct: 87 LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146 Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 R + + GR+ + D S+ N+ + ++ + L Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240 + +G+ + + + F +T + + A P+ + G Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291 + + + G + L+ L+ + ++ + ++ Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325 Query: 292 SILPNSSTDED 302 + + + Sbjct: 326 ANGSPAKGVIE 336 >gi|222056862|ref|YP_002539224.1| protein of unknown function DUF748 [Geobacter sp. FRC-32] gi|221566151|gb|ACM22123.1| protein of unknown function DUF748 [Geobacter sp. FRC-32] Length = 992 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 50/383 (13%), Positives = 113/383 (29%), Gaps = 43/383 (11%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP-SVFFKDIRIDQKEDGSFE 80 F+ + ++ G+K+A+ G I I PF ++ +D+R + G Sbjct: 20 GFVAFVLPGIVKNQAVQRVEAATGRKLAIGG---ISINPFAWTIEVRDLRFSDR-GGETF 75 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---RKSTMDMIHNV 137 + + L + I HL + N+ R+ Sbjct: 76 ATFSSARIAVSPSSLYRRAPIIASARITSLHLRIVRVGANIYNFSDLFKRQPQHSQQSRF 135 Query: 138 ILEKIHVKGGRIKIIDQES--DQVYFLSDLNLQIS-----ARFLNIISPLSIDSIKGSVI 190 L + + G + IDQ ++ + L + L + + + + Sbjct: 136 SLNNLMITNGSVDFIDQGLPIEKRHELRKIELAVPFITTISYLAGRYITPRLSAEVNGSP 195 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250 G A + +A N ++ + P A P+ ++ SG Sbjct: 196 LHVEGKLRPFPKAVEASATVEFNNASLPHYLAYIPGALPVRVE--------------SGR 241 Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR----ISRYKLQSILPNSSTDEDNKT- 305 S + + N ++D V I L+ + ++ + Sbjct: 242 MSAKVA-MSYRAAQKENPGLTFNSNVTLADTKVADRKGIPLLALRQLDVAANLEIGGPGG 300 Query: 306 -KVSQDEENLLNFSE---NGAESMHDLNETDFFEEEEKKN----KNDDLKKDDIQYSVNK 357 ++ + S L + K+N + L+ ++++ ++ Sbjct: 301 TRLEKGSVQARQLSAWVGKREGITLALLSLEGGTYSRKENLLKVADVTLRDGNLRFFRDR 360 Query: 358 KEEKDNSHDKENQENFSGDKMIL 380 K +E++ +G K L Sbjct: 361 KGVFLPLLHREDKGTVTGKKTPL 383 >gi|319762625|ref|YP_004126562.1| hypothetical protein Alide_1931 [Alicycliphilus denitrificans BC] gi|330824715|ref|YP_004388018.1| hypothetical protein Alide2_2130 [Alicycliphilus denitrificans K601] gi|317117186|gb|ADU99674.1| hypothetical protein Alide_1931 [Alicycliphilus denitrificans BC] gi|329310087|gb|AEB84502.1| protein of unknown function DUF748 [Alicycliphilus denitrificans K601] Length = 1252 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 44/374 (11%), Positives = 107/374 (28%), Gaps = 38/374 (10%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEG 85 + R ER A+ +G+K+ V K+ LP+ + I ++ + + +I Sbjct: 39 VVPPVARSQIERHASEALGRKVTVS---KVEFLPWTLEATVHGLSIASEDGKASQVQIAR 95 Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----------RKSTMDMIH 135 + + AE L + + +D+P ++ ++ G ++ + Sbjct: 96 IYIDAELQSLWRLAPVIDAVQVDEPVIHVTQTAPGHYDFDDVLDRLAQQPKTRDGEARPL 155 Query: 136 NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195 L + ++GG + D+ +V+ L L + + + V Sbjct: 156 RFALYNLALRGGALDFDDRTVGKVHMLRGLRIDVP------FLSNFSADREVKVTPRLAF 209 Query: 196 NFDNKRSAFKITANFPAKNKAISLKIQLFPLA-YPIIIDLFGNLFWNEKQPIYSGVFSVA 254 + A+N+ + + + P + + K + + Sbjct: 210 ELNGSAFDTAAQTTPFAQNRQTEVNLHVDGFDLGPFSGYIPSRVPVRLKSGVLDADLKLG 269 Query: 255 GDFSKLLNLELSAKKSRLSGN----------FKISDGNVRISRYK-LQSILPNSSTDEDN 303 + + RL G V + + LQ I+ + D Sbjct: 270 FEQEDATPRLTISGGVRLHGVRTTDAAGEPLLDFDALQVALKDVRPLQRIVDVDAIDWHG 329 Query: 304 ------KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNK 357 + L +GA++ + + L + ++ Sbjct: 330 VHVHLRRDVAGAVALPGLAQPADGADATAKPTPAPQDAAWQVRLGRVGLHDGVVDWTDAS 389 Query: 358 KEEKDNSHDKENQE 371 + EN + Sbjct: 390 LPGGKAAWKAENLQ 403 Score = 48.7 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 33/261 (12%), Positives = 74/261 (28%), Gaps = 20/261 (7%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 V +R + L + + + L + V + H++ G Sbjct: 284 GVRLHGVRTTDAAG-EPLLDFDALQVALKDVRPLQRIVDVDAIDWHGVHVHLRRDVAGAV 342 Query: 123 NWF--------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLNL 167 + D V L ++ + G + D NL Sbjct: 343 ALPGLAQPADGADATAKPTPAPQDAAWQVRLGRVGLHDGVVDWTDASLPGGKAAWKAENL 402 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 Q A + + + + ++ G D R A + A A+S++ +A Sbjct: 403 QAEAWAVALPFQQPLQFRLSTQLSGGAAKGDAARLAVQGQATDVQAQAAVSVRGLSMAMA 462 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 P + + + +A + + + +L+ + ++ R R Sbjct: 463 APYL----AGVLKPSLAGMLDADLGLARNGDAMAAKVATLSLGKLALDCAAAEKKCRTLR 518 Query: 288 YKLQSILPNSSTDEDNKTKVS 308 + +S E + +VS Sbjct: 519 TAGIADAAKTSLAEAGRLEVS 539 >gi|189425668|ref|YP_001952845.1| AsmA family protein [Geobacter lovleyi SZ] gi|189421927|gb|ACD96325.1| AsmA family protein [Geobacter lovleyi SZ] Length = 1094 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 110/354 (31%), Gaps = 30/354 (8%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI 83 P +D ++ + +++ + G + + P F D+ I ++ Sbjct: 32 PRLLDLNSYKTQLTELLQQQLKRQVRL-GNSQFSWVLGPEFTFSDLYIQERNSSLEFLSA 90 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIH 143 +S R LPLL+ +I + ++ ID ++GV N +++ + Sbjct: 91 RRISFRLALLPLLNKKIELREIIIDDARATVSRDAQGVMNIDDLLQPAPDAYDLRARGLR 150 Query: 144 VKGGRIKIIDQESDQ---VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200 ++ G + DQ S + +S +NL I S + + ++ G+ + Sbjct: 151 IRNGTLFWRDQASAEICTRLTVSGINLSIDKLIRGRKSSYKLAA---TLEGSSPGSINTA 207 Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYP-IIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259 + + I K+ L + Y + + + S +V G + Sbjct: 208 GTIRLPKTGNLLQQTDIDAKLDLTQVEYWRFWPYIDDYVPFPSPGGTASLNLAVKG---R 264 Query: 260 LLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319 NL+ + + + + D K S + + S Sbjct: 265 WQNLKANGTLLLRNPKVVWP------TVFHAVVAPKQLQLAVDLKWTPSLLDMPSVQLSL 318 Query: 320 NGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENF 373 +G + + DL+ D SV E + +N F Sbjct: 319 DGFAI-------------KGAVRLGDLQGKDPSISVKATSEPFDYLRVKNYIPF 359 >gi|254719632|ref|ZP_05181443.1| AsmA family protein [Brucella sp. 83/13] gi|306837733|ref|ZP_07470601.1| AsmA family protein [Brucella sp. NF 2653] gi|306407189|gb|EFM63400.1| AsmA family protein [Brucella sp. NF 2653] Length = 645 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 30/311 (9%), Positives = 85/311 (27%), Gaps = 31/311 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79 VP + R ++ + G + ++ ++ + P + + + Sbjct: 27 VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126 + + + L + G I + I +PH+N +S G Sbjct: 87 LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146 Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 R + + GR+ + D S+ N+ + ++ + L Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240 + +G+ + + + F +T + + A P+ + G Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291 + G + L+ L+ + ++ + ++ Sbjct: 267 -SGDRFFEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325 Query: 292 SILPNSSTDED 302 + + + Sbjct: 326 ANGSPAKGVIE 336 >gi|225853080|ref|YP_002733313.1| AsmA family protein [Brucella melitensis ATCC 23457] gi|256045222|ref|ZP_05448120.1| AsmA family protein [Brucella melitensis bv. 1 str. Rev.1] gi|256263437|ref|ZP_05465969.1| AsmA [Brucella melitensis bv. 2 str. 63/9] gi|260565181|ref|ZP_05835665.1| AsmA protein [Brucella melitensis bv. 1 str. 16M] gi|225641445|gb|ACO01359.1| AsmA family protein [Brucella melitensis ATCC 23457] gi|260151249|gb|EEW86343.1| AsmA protein [Brucella melitensis bv. 1 str. 16M] gi|263093446|gb|EEZ17496.1| AsmA [Brucella melitensis bv. 2 str. 63/9] gi|326409622|gb|ADZ66687.1| AsmA family protein [Brucella melitensis M28] Length = 645 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 30/311 (9%), Positives = 87/311 (27%), Gaps = 31/311 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79 VP + R ++ + G + ++ ++ + P + + + Sbjct: 27 VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126 + + + L + G I + I +PH+N +S G Sbjct: 87 LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146 Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 R + + GR+ + D S+ N+ + ++ + L Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240 + +G+ + + + F +T + + A P+ + G Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291 + + + G + L+ L+ + ++ + ++ Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325 Query: 292 SILPNSSTDED 302 + + + Sbjct: 326 ANGSPAKGVIE 336 >gi|254710638|ref|ZP_05172449.1| AsmA family protein [Brucella pinnipedialis B2/94] gi|254714822|ref|ZP_05176633.1| AsmA family protein [Brucella ceti M644/93/1] gi|254717880|ref|ZP_05179691.1| AsmA family protein [Brucella ceti M13/05/1] gi|256032131|ref|ZP_05445745.1| AsmA family protein [Brucella pinnipedialis M292/94/1] gi|256160327|ref|ZP_05458021.1| AsmA family protein [Brucella ceti M490/95/1] gi|256255532|ref|ZP_05461068.1| AsmA family protein [Brucella ceti B1/94] Length = 645 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 30/311 (9%), Positives = 87/311 (27%), Gaps = 31/311 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79 VP + R ++ + G + ++ ++ + P + + + Sbjct: 27 VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126 + + + L + G I + I +PH+N +S G Sbjct: 87 LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146 Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 R + + GR+ + D S+ N+ + ++ + L Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240 + +G+ + + + F +T + + A P+ + G Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291 + + + G + L+ L+ + ++ + ++ Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325 Query: 292 SILPNSSTDED 302 + + + Sbjct: 326 ANGSPAKGVIE 336 >gi|326539325|gb|ADZ87540.1| AsmA family protein [Brucella melitensis M5-90] Length = 621 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 30/313 (9%), Positives = 87/313 (27%), Gaps = 31/313 (9%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDG 77 VP + R ++ + G + ++ ++ + P + + + Sbjct: 1 MAVVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQ 60 Query: 78 SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNW 124 + + + L + G I + I +PH+N +S G Sbjct: 61 KPLMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGT 120 Query: 125 FQRKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 R + + GR+ + D S+ N+ + ++ + Sbjct: 121 AIRAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNAT 180 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNL 238 L + +G+ + + + F +T + + A P+ + G Sbjct: 181 LEWPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKA 240 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYK 289 + + + G + L+ L+ + ++ + + Sbjct: 241 NISRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVE 299 Query: 290 LQSILPNSSTDED 302 + + + + Sbjct: 300 MTANGSPAKGVIE 312 >gi|163753139|ref|ZP_02160263.1| outer membrane assembly protein [Kordia algicida OT-1] gi|161326871|gb|EDP98196.1| outer membrane assembly protein [Kordia algicida OT-1] Length = 903 Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 53/388 (13%), Positives = 104/388 (26%), Gaps = 51/388 (13%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI- 58 +++L G V+++ P F+ + K + + + Sbjct: 4 KKILKITGITLLVLIIALAVTPYL-----FKGKIIAMVKDNINKNVNAQVDFTDADVSFF 58 Query: 59 --LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSG---EIRVFDMYIDQPH 111 P S+ +D+ + + +++ L G I+V+ ID Sbjct: 59 RNFPKASIVLEDVEVINNAPFENDTLFYGKEVAITTAIGELFKGTDEAIQVYSFTIDNAK 118 Query: 112 LNFYLSSKGVSNWFQRKSTMDMIH---------NVILEKIHVKGGRIKIIDQESDQVYFL 162 LN + G +N+ K ++ H+ I D +S + L Sbjct: 119 LNIQVDESGNANYDIAKPNTTETPENVSKTSDFKFKIDNYHILNTDINYFDAKSKTLLAL 178 Query: 163 SDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221 D+ + F S L + S D + +N + + Sbjct: 179 KDVQHEGFGDFSLATSELDTQTDALVSFAIGDMNYIDKQHIKLDALIGMDLENGKYTF-L 237 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS------------AKK 269 + L + + G + N K + A Sbjct: 238 ENEALVNQLPLKFEGFVKVNPDSQEVDISLQTPSSDFKNFLAVIPEAYAKNISTVQTAGN 297 Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 +SG K RI ++ + N+S + L S L Sbjct: 298 FEVSGEIKGLVTETRIPTIDIKVVSNNASF-----------KYPDLPKSVENININAQLK 346 Query: 330 ETDFFEEEEKKN-KNDDLKKDDIQYSVN 356 T E+ + N K D+ + N Sbjct: 347 NTTGKTEDTYVDINNLAFKIDEDAFRGN 374 >gi|71907231|ref|YP_284818.1| hypothetical protein Daro_1599 [Dechloromonas aromatica RCB] gi|71846852|gb|AAZ46348.1| Protein of unknown function DUF748 [Dechloromonas aromatica RCB] Length = 1124 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 42/333 (12%), Positives = 102/333 (30%), Gaps = 39/333 (11%) Query: 4 RVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61 ++ LG V+ ++G F P + ++Q +L + ++++++ +I I P+ Sbjct: 26 KLGKWLGIFLLVIGVLGFFAAPPL-----LKSILQKQLSLQLHREVSIE---QIAINPYA 77 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S + I + G + + L + + V ++ + L ++G Sbjct: 78 LSAKVNGLSIR-ADGGKEVAGFDELFVNLSSASIFKLAAVVDEVRLQGLRLAVSRVAEGR 136 Query: 122 SNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 + + L I + +I DQ +V+ +SD+NL + Sbjct: 137 YDISDLLDEWMKPKDEPEKDTPRFSLNNIQLINAKIVFDDQPKGKVHTISDINLALPFVS 196 Query: 174 LNII----------------SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217 SPL++ + F + P +++ Sbjct: 197 SLPYQAEVLVHPAFSAKINGSPLALTGESKPFTTTHESHLSLDLDRFDLAVLQPYLPESL 256 Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 ++ L + + G V+G + + RL Sbjct: 257 PFRLNAGTLDTEMKAMFK-EVSDKVYSVTVIGAAHVSGLVLAESDGQALVGWKRLDVELD 315 Query: 278 I---SDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + + R L + + + ++ + V Sbjct: 316 SIDPLNRKAAVKRVALDGLDVSLAVNKQGEFNV 348 >gi|209809078|ref|YP_002264616.1| hypothetical protein VSAL_II0269 [Aliivibrio salmonicida LFI1238] gi|208010640|emb|CAQ81023.1| putative membrane protein [Aliivibrio salmonicida LFI1238] Length = 1032 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 47/401 (11%), Positives = 122/401 (30%), Gaps = 48/401 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61 R L + VP ++ Q + ++ + + + I PF Sbjct: 20 RWSTYFLTAYLFYAAMLGLLVPYI-----AKQQIPEQLSALIERPVTLT---DITFNPFT 71 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK- 119 + + I ED + +E S+R F + + I V + I++P ++ + Sbjct: 72 LQLDVQGFAIL--EDTTPFISLEHASVRLNFWQSIFNAAIFVEHITINKPFVDIERLNNP 129 Query: 120 --------------GVSNWFQRKSTMDMIHNVI---------LEKIHVKGGRIKIIDQES 156 + ++ + ++ +D S Sbjct: 130 DELVFNFSDILTTIAKKTASDPIVEEPTDEVIDRHALLFPVLIKHTRITQANVQFLDGVS 189 Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216 ++NL++ A + ++ + + + ++ Sbjct: 190 GAKLEYPNINLEVGAFSTQGLLTDAVPTNHYQLHMT-DADSGTVDVQGQVQLTPLEVVGN 248 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF 276 + +K P + I + + + V + N ++ A + G F Sbjct: 249 LDIKQIQLPRLWGF-IAKDMVAKLTSGKVSLASNYHVVQTIGETENDDVMAITTD-RGMF 306 Query: 277 KISDGN--------VRISRYKLQSILPNSSTDEDNKTKVSQDEEN-LLNFSENGAESMHD 327 ++D N + + + + I + + + ++ ++ N +N ++ G + +H Sbjct: 307 SLNDLNFDADDKSILSLPVFSVNDIKTDVNQQTIDIASITSNDLNVAVNVNKKGVDLIHL 366 Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 F +E K + ++K VN + + KE Sbjct: 367 FTPKSFSQESTKSPEKTEVKSPKESAVVNSDNDGVTAESKE 407 >gi|261752889|ref|ZP_05996598.1| AsmA family protein [Brucella suis bv. 5 str. 513] gi|261742642|gb|EEY30568.1| AsmA family protein [Brucella suis bv. 5 str. 513] Length = 619 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 30/310 (9%), Positives = 87/310 (28%), Gaps = 31/310 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80 VP + R ++ + G + ++ ++ + P + + + Sbjct: 2 VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127 + + + L + G I + I +PH+N +S G R Sbjct: 62 MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121 Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + + GR+ + D S+ N+ + ++ + L Sbjct: 122 AQRALLQSGANKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + +G+ + + + F +T + + A P+ + G + Sbjct: 182 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 241 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292 + + G + L+ L+ + ++ + ++ + Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300 Query: 293 ILPNSSTDED 302 + + Sbjct: 301 NGSPAKGVIE 310 >gi|301161991|emb|CBW21535.1| putative outer membrane protein [Bacteroides fragilis 638R] Length = 837 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 38/347 (10%), Positives = 97/347 (27%), Gaps = 43/347 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQAT----LIVGKKIAVKGGIKIH 57 +++ + V+L+ F +P FR E ++ + I Sbjct: 1 MKKGFKITAIVIGVILILMFLLPF-----AFRGKIEGIVKSEGNKMLNGHFDFS-SLDIS 54 Query: 58 I---LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPH 111 + P SV D + + K ++ L + V + ++ Sbjct: 55 LFRNFPKASVTLNDFWLKGTGEFENDTLVKAGEVTAAINLFSLFGDDGYDVSKVSVENTR 114 Query: 112 LNFYLSSKGVSNWFQRKSTMDMIH-----------NVILEKIHVKGGRIKIIDQESDQVY 160 L+ + G +NW K + L++ +K + D++S Sbjct: 115 LHAIVLPDGKTNWDIMKPDSSTASETQESGESSTFRIKLQRFVIKNMNVVYDDRQSAMYA 174 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 + + N S + + LS+++ ++ + G ++ + A Sbjct: 175 DIHNFNALCSGDLGSDQTLLSLEAETEALTYKMNGIPFLSQANVYAKMDVDADLAHNKFT 234 Query: 221 IQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 ++ I + G + + + + K + + A Sbjct: 235 LKKNEFRLNAIKAGIDGWIELKDPAIDMDLKLNTSEIGFKEILSLIPA------------ 282 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + +K ++ + K + D + +M Sbjct: 283 ---IYSKEFKNLKTDGTATLEATAKGILQGDMVPQFDVRLAVKNAMF 326 >gi|253563682|ref|ZP_04841139.1| outer membrane assembly protein [Bacteroides sp. 3_2_5] gi|251947458|gb|EES87740.1| outer membrane assembly protein [Bacteroides sp. 3_2_5] Length = 837 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 38/347 (10%), Positives = 97/347 (27%), Gaps = 43/347 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQAT----LIVGKKIAVKGGIKIH 57 +++ + V+L+ F +P FR E ++ + I Sbjct: 1 MKKGFKITAIVIGVILILMFLLPF-----AFRGKIEGIVKSEGNKMLNGHFDFS-SLDIS 54 Query: 58 I---LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPH 111 + P SV D + + K ++ L + V + ++ Sbjct: 55 LFRNFPKASVTLNDFWLKGTGEFENDTLVKAGEVTAAINLFSLFGDDGYDVSKVSVENTR 114 Query: 112 LNFYLSSKGVSNWFQRKSTMDMIH-----------NVILEKIHVKGGRIKIIDQESDQVY 160 L+ + G +NW K + L++ +K + D++S Sbjct: 115 LHAIVLPDGKTNWDIMKPDSSTASETQESGESSTFRIKLQRFVIKNMNVVYDDRQSAMYA 174 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 + + N S + + LS+++ ++ + G ++ + A Sbjct: 175 DIHNFNALCSGDLGSDQTLLSLEAETEALTYKMNGIPFLSQANVYAKMDVDADLAHNKFT 234 Query: 221 IQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 ++ I + G + + + + K + + A Sbjct: 235 LKKNEFRLNAIKAGIDGWIELKDPAIDMDLKLNTSEIGFKEILSLIPA------------ 282 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + +K ++ + K + D + +M Sbjct: 283 ---IYSKEFKNLKTDGTATLEATAKGILQGDMVPQFDVRLAVKNAMF 326 >gi|171056974|ref|YP_001789323.1| hypothetical protein Lcho_0283 [Leptothrix cholodnii SP-6] gi|170774419|gb|ACB32558.1| protein of unknown function DUF748 [Leptothrix cholodnii SP-6] Length = 1016 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 78/298 (26%), Gaps = 26/298 (8%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-P 62 RV + +V+ + + + E + +G + + +I I P+ Sbjct: 26 RVSLWTAGTLAVLALAWTLLIGSWLPGFIKPRIEAAGSDALGTPMVLD---RITIAPWKL 82 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 V +R+ + + + + + + + + QP +N S Sbjct: 83 VVQLDGLRVGEA--AAPLFTLGSAQTQLSLQSIRQRAPVLASLTLQQPRVNVERLSAERF 140 Query: 123 NWFQ-------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 N+ L I ++GG + D + + L + + Sbjct: 141 NFSAVLDHVKARQAAQPPAPPSPEPARFALHNIRLEGGALHYRDAVLQTEHHVEALRIGL 200 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 ++ V D A A K L + L + Sbjct: 201 P------FISSLPSDVETEVQPLLEARIDGSALRLDGHARPFAAAKPAELALDLQGVKLA 254 Query: 230 IIID-LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 L L + G S E + R+ G IS ++ + Sbjct: 255 DWASLLRAVLPAEFAPQVLQGQLDTKLAISFEARPEPAPPSLRVRGELAISGFDLAVP 312 >gi|311108342|ref|YP_003981195.1| hypothetical protein AXYL_05180 [Achromobacter xylosoxidans A8] gi|310763031|gb|ADP18480.1| hypothetical protein AXYL_05180 [Achromobacter xylosoxidans A8] Length = 1207 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 29/264 (10%), Positives = 82/264 (31%), Gaps = 27/264 (10%) Query: 36 FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95 + + ++G+ ++V G I + +V +D+ + Q + + + L + A + L Sbjct: 6 LVQDVSKMIGRDVSV-GDISFNPF-TLTVRARDLAVAQPDSQTPLLTLAELDVSAAWTSL 63 Query: 96 LSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---------------RKSTMDMIHNVILE 140 V M + +P++ N+ + + L Sbjct: 64 FWFAPVVDRMTLREPNIAIVREDVTRFNFSDIQQRVAELTAAQPEEPAKPDEGLPRFSLN 123 Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200 + ++ G I + D+ + + + ++ + + + V + Sbjct: 124 NMVIENGSITLDDKVTGRKQVVDEVGVGVPFISTFGYAT------DIDVQPRVHLRINGS 177 Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL 260 A K + +L++ L D+ + S + + Sbjct: 178 PFDLNGVARPFDKVPSSTLRVAFNGLQLEKWADV---WPMPLPFKVESALLD-SNLQVVF 233 Query: 261 LNLELSAKKSRLSGNFKISDGNVR 284 + + K R+ G+ + ++R Sbjct: 234 EQPKDAPPKIRVVGDLGLRRLDLR 257 >gi|114327247|ref|YP_744404.1| asmA family protein [Granulibacter bethesdensis CGDNIH1] gi|114315421|gb|ABI61481.1| asmA family protein [Granulibacter bethesdensis CGDNIH1] Length = 937 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 45/346 (13%), Positives = 98/346 (28%), Gaps = 39/346 (11%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66 I + L + +V A V L +D R E + G ++G + + P+P +F Sbjct: 31 IAVSGLVVLSIVAAGAVWLMLDQAVIRHRIEASLYKVSGHPAHIEGPLGLAFNPWPVLFV 90 Query: 67 KDIRIDQK----------EDGSF-ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 +++ + Q + + + ++ PLL G I V + + + + Sbjct: 91 REVSLAQPEEPSGAALRHDWPDPWFLRAQDITAGIALWPLLHGHITVSSLSLARLDIRMT 150 Query: 116 LSSKGVSNWFQRKSTMDMI--------------------HNVILEKIHVKGGRIKIIDQE 155 + G NW ++ + + + + D Sbjct: 151 RNHAGEENWIIKRIKAPSASAAPPPVSAAGEAVAPRPKRAVPPVRVLRIGEASVVYHDLR 210 Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT-GNFDNKRSAFKITANFPAKN 214 + V+ L L + + I LS + A G+ D + + N Sbjct: 211 NGSVWAAEKLRLHATDQQGTIALMLSGLVQGIPMRALVEGGSVDALLDPDEQHSWPLQIN 270 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274 + + + + G + + V+ L L L Sbjct: 271 AQLLPTLHGRLDRNNPHLSVSGVVDHPRHGRGFHL-MVVSRVLDGARLLPLRQAIPALD- 328 Query: 275 NFKISDGNVRISRYKLQSILPNS---STDEDNKTKVSQDEENLLNF 317 ++ NV + + D+ V Q + + Sbjct: 329 --QLVGKNVPPPEIWSAIAALHDVSLTFRLDDDATVQQGLSPVFSV 372 >gi|303325922|ref|ZP_07356365.1| LigA [Desulfovibrio sp. 3_1_syn3] gi|302863838|gb|EFL86769.1| LigA [Desulfovibrio sp. 3_1_syn3] Length = 684 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 55/381 (14%), Positives = 107/381 (28%), Gaps = 62/381 (16%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++RVL+ + + V+ V + ID GK + + +LP Sbjct: 1 MKRVLLWILGIVIVLGVAGAILLGRIDTQFVVNQIADATAKATGKPLVFASAPSLSLLP- 59 Query: 62 PSVFFKDIRIDQKEDGSFES-KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS-- 118 P V F + +DG + ++ + E PLLSG + V ++ +D P L Sbjct: 60 PGVKFGQAGWGEIKDGQGLAVSVKSGMVELELAPLLSGNLVVREVRLDNPVLEVREGKAV 119 Query: 119 KGVSN------------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 G V L ++ V+ G ++ +D + DLN Sbjct: 120 SGQDAPAAAPAAPPVSGAQTGAVAPSDELPVELMRLVVRQGEVRYVDAR-GVHLEIKDLN 178 Query: 167 LQISARFLNIISPLSIDS-----------IKGSVIAEGTGNFDNKRSAFK---------- 205 L + + + D + G++ + + F+ Sbjct: 179 LSVENLRRREEAGMQCDFSFDLKEDQKAILAGNLALDAKLRYYAPHLTFRQISLTVTPLG 238 Query: 206 ----ITANFPAKNKAISLKIQLFPLAYPI--------IIDLFGNLFWNEKQPIYSGVFSV 253 A +L +Q L + L G + + G S+ Sbjct: 239 GLLPKEAGPAQLVCEGALNLQTQSLRLATARLSTPQARLTLGGEATLTPQA--FKGTVSL 296 Query: 254 AGDFSKLLNLELSAKKS------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 G KL L K + +D + + + +Q + Sbjct: 297 EGSPRKLAALTGQTLKPSDNDVLSFKSVLEYADDTLHLRQIVMQL----DDIPVRGDLSL 352 Query: 308 SQDEENLLNFSENGAESMHDL 328 + ++ D Sbjct: 353 ALGTPLAISGGIQTGMINLDK 373 >gi|254704852|ref|ZP_05166680.1| AsmA family protein [Brucella suis bv. 3 str. 686] Length = 645 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 31/311 (9%), Positives = 87/311 (27%), Gaps = 31/311 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79 VP + R ++ + G + ++ ++ + P + + + Sbjct: 27 VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126 + + + L + G I + I +PH+N +S G Sbjct: 87 LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146 Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 R + + GR+ + D S+ N+ + ++ + L Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240 + +G+ + K + F +T + + A P+ + G Sbjct: 207 WLRTSSAATLKGSAKWRGKATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291 + + + G + L+ L+ + ++ + ++ Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325 Query: 292 SILPNSSTDED 302 + + + Sbjct: 326 ANGSPAKGVIE 336 >gi|218442203|ref|YP_002380532.1| hypothetical protein PCC7424_5316 [Cyanothece sp. PCC 7424] gi|218174931|gb|ACK73664.1| protein of unknown function DUF490 [Cyanothece sp. PCC 7424] Length = 1982 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 111/325 (34%), Gaps = 15/325 (4%) Query: 6 LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65 LIG G L ++ + G V F+ + E Q + +G+++ + + + Sbjct: 35 LIGGGVLIALGVGGYLGVRYFV-YERLSPLIEAQLSNFLGREVNLGEVESFSL---THIR 90 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 F + I + + ++ ++++ LPLL G ++ + P++ G Sbjct: 91 FGNTSIPATPTDADNASVDAVNIQFNILPLLLGRPLPLEVTLVDPNVYIDQDKTGKW-VD 149 Query: 126 QRKSTMDMIHNVILE-KIHVKGGRIKIIDQESDQVYFL--SDLNLQISARFLNIISPLSI 182 + + L+ K++++ + + + Q + I+A + L + Sbjct: 150 IELPEQEEELPIDLDVKVNLEDADLALKPNQLKQPVTIQADGTARYITADPQQLQYDLDV 209 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL--FPLAYPIIIDLFGNLFW 240 + +K V EG D ++ + N A + +L + + DL N+ Sbjct: 210 EVLKSDVNLEGKTVLDTGQTQLNLQVNRLALGEIAALLPANLINLNSGTLNADLNLNVPS 269 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 EK G +V+ L + + V I ++++ ++ Sbjct: 270 LEKIEGTQGQGNVSLTQIAGRLPTLKVP-IKANVELGFEGQTVLIDQFRV----SLNNIV 324 Query: 301 EDNKTKVSQDEENLLNFSENGAESM 325 K + + + N + Sbjct: 325 AQAKGSIDWQKGYNIQAQINPFQVT 349 >gi|182680265|ref|YP_001834411.1| AsmA family protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182636148|gb|ACB96922.1| AsmA family protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 655 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 103/343 (30%), Gaps = 38/343 (11%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 R IGLG L ++ ++ + P + R + E Q G + G + +LP P Sbjct: 27 RSAIGLGILMALGIIVSLVAPWLFSASALRGEIEAQIRATTGLAVQSHGRAVLVVLPEPH 86 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS- 122 V + + + L + LPLL G + + + + + G Sbjct: 87 VNIEAVSFADPSGAL-RIETPMLKGYFQVLPLLLGRLEIASASL--FDAHMVIDLDGRPM 143 Query: 123 ----------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + + L +++ G+ + + S + + + +N+ + R Sbjct: 144 PSDSAIGRAADARPATAQAARTDAINLGVLNLINGQALLKSRTSPEEHLIKAINVTLDWR 203 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK-AISLKIQLFPLAYPII 231 L + L G+ + ++ P + I L A + Sbjct: 204 QLGAAAQLI-----------GSVEYHDQSIDLSAWIAKPVELLRGGPSDITLRLEAPSLS 252 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR--------LSGNFKISDGNV 283 + G L E Q ++G + L +S N I + N Sbjct: 253 LSTRGRLGS-EPQFHFNGQMEATTPALRDLLALGDRSLPLPGPFNDIVVSANTVIENDNA 311 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 S L+ + + E + +L+ + Sbjct: 312 AFSNLHLEI---DGNRFEGALAMQGLSGKPILSGTLATNLLSL 351 >gi|91785978|ref|YP_546930.1| hypothetical protein Bpro_0065 [Polaromonas sp. JS666] gi|91695203|gb|ABE42032.1| hypothetical protein Bpro_0065 [Polaromonas sp. JS666] Length = 461 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 53/406 (13%), Positives = 126/406 (31%), Gaps = 50/406 (12%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 + + L ++ AFT+ ++ DFR+ E +A+ +G + + G + + + P P Sbjct: 6 KWAVYVSLGLAVLLAAVAFTLHRWVSTDDFRQRVEHEASAALGMPVTLAG-VAVDVWPLP 64 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-------NFY 115 +V I + +E + +R ++ PLL G + + + + + L Sbjct: 65 AVALTGIVV----QSKPPLTLERVEVRPQWQPLLQGRLAISTLLVRRAVLPQQGIDAVLL 120 Query: 116 LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 K ++ + E ++G + ++ ++ + + Sbjct: 121 ALQKKKQPASAKQGPKPKTPDPAPESAGLEGL------PRRTVLDEVTWISAAGARTTVA 174 Query: 176 IISPLSIDSIKGSVIAE-GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 + L+ D + SV + GN R+ + PA N + + + + + +++ Sbjct: 175 AEAALADDGLPDSVSFKLLKGNLQGLRATLQREEPKPADNASKAGDAVVGEDRWALRVEV 234 Query: 235 ---------------FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 G + G G L+A LSG + + Sbjct: 235 GGGKIEGRLALRRAPAGAPVKPGEALALQGQLQTRGVEVSA----LTAPAGALSGQLEAT 290 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE--------NGAESMHDLNET 331 ++ + + V N L+ ++ G ++ D Sbjct: 291 T---SLNARAATTGGLVDALQSHTTFTVRNAVINGLDLAKAVQTVGLSRGGQTRLDTLAG 347 Query: 332 DFFEEE-EKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376 + + N + + N + N +GD Sbjct: 348 QVNTQGRAAQLSNLVASSGVLSATGNVAISPAKALSGRVIVNVAGD 393 >gi|265995493|ref|ZP_06108050.1| AsmA family protein [Brucella melitensis bv. 3 str. Ether] gi|262766606|gb|EEZ12395.1| AsmA family protein [Brucella melitensis bv. 3 str. Ether] Length = 619 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 29/310 (9%), Positives = 86/310 (27%), Gaps = 31/310 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80 VP + R ++ + G + ++ ++ + P + + + Sbjct: 2 VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127 + + + L + G I + I +PH+N +S G R Sbjct: 62 MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121 Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + + GR+ + D S+ N+ + ++ + L Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAVNRAGSEPNVPHDKQITDVNATLEW 181 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + +G+ + + + F +T + + P+ + G + Sbjct: 182 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTTNPLSLTFQGKANIS 241 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292 + + G + L+ L+ + ++ + ++ + Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300 Query: 293 ILPNSSTDED 302 + + Sbjct: 301 NGSPAKGVIE 310 >gi|161619548|ref|YP_001593435.1| AsmA family protein [Brucella canis ATCC 23365] gi|260565908|ref|ZP_05836378.1| AsmA protein [Brucella suis bv. 4 str. 40] gi|161336359|gb|ABX62664.1| AsmA family protein [Brucella canis ATCC 23365] gi|260155426|gb|EEW90506.1| AsmA protein [Brucella suis bv. 4 str. 40] Length = 645 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 31/311 (9%), Positives = 87/311 (27%), Gaps = 31/311 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79 VP + R ++ + G + ++ ++ + P + + + Sbjct: 27 VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126 + + + L + G I + I +PH+N +S G Sbjct: 87 LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146 Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 R + + GR+ + D S+ N+ + ++ + L Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240 + +G+ + K + F +T + + A P+ + G Sbjct: 207 WLRTSSAATLKGSAKWRGKATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291 + + + G + L+ L+ + ++ + ++ Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325 Query: 292 SILPNSSTDED 302 + + + Sbjct: 326 ANGSPAKGVIE 336 >gi|152982123|ref|YP_001352525.1| hypothetical protein mma_0835 [Janthinobacterium sp. Marseille] gi|151282200|gb|ABR90610.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 1349 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 106/310 (34%), Gaps = 19/310 (6%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDI 69 F+F V+ +G V +++R D E AT +G+ + + G I P + ++ Sbjct: 4 FIFCVLFLGLRYVV-LPQISNYRVDVENVATKAIGRPVTI-GSIDASWHGLRPFLSLDNV 61 Query: 70 RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS------- 122 I K G ++ +S + ++ ++R+ + ID+P ++ + G Sbjct: 62 AIYDK-GGDVALRLPKVSATVSWWSVMVADLRLHSLEIDKPDMDVERDANGNFYVAGMLI 120 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLNLQISARFLNIISPLS 181 + + + +I +K G+++ D+ L+D+N+ + + L Sbjct: 121 DMQKDGDGKAANWILSQREIRIKDGQLRWQDKSRQAPELLLNDVNVVLHNEGRHHQFALK 180 Query: 182 -IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 + + FD+ + KI+ + A+ ID L Sbjct: 181 ATPPAAIAAPLDVRAAFDHPYFSKKISDATRWTGTIYTAVRDTELAAWKTYIDFPFELQQ 240 Query: 241 NEKQPIYSGVFSVAG-----DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 + F A L ++ +K + ++G + IS L + Sbjct: 241 AKGSLRAWLSFDHARIADLTADLALSDVSAQLRKDLVPLELTSANGRIAISEP-LDTSPR 299 Query: 296 NSSTDEDNKT 305 + + Sbjct: 300 DGKPTFGAQG 309 >gi|323700431|ref|ZP_08112343.1| hypothetical protein DND132_3025 [Desulfovibrio sp. ND132] gi|323460363|gb|EGB16228.1| hypothetical protein DND132_3025 [Desulfovibrio desulfuricans ND132] Length = 1235 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 50/392 (12%), Positives = 108/392 (27%), Gaps = 31/392 (7%) Query: 1 MLRRV-LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59 +LRR+ L L G F VP + Q + ++ ++ I Sbjct: 14 LLRRIVFWLLTAFVVYTLFGFFAVPPI-----LKSVLVSQIKENLKREASLG---DIRFN 65 Query: 60 P-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 P + D+ I ++ + L + + V + +D ++N Sbjct: 66 PLNFHLEASDLHIKNLKEEGDLLSLGHLEVAPGASSIWKLAPVVSYLKLDGLNVNVTFYG 125 Query: 119 KGVSNWF-------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 G + + I L + + I D+ + + ++D+ Sbjct: 126 NGKYSVSDLLGTPDSVNQEQPKPEEKGAIFPFALYGLELTNSMITFDDRPRGKKHVIADI 185 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT-GNFDNKRSAFKITANFPAKNKAISLKIQLF 224 +L++ + + G + F T + A+ + +Q + Sbjct: 186 HLRVPFTSSIAKDVKEFTQPVFTAVVNGDPVELKGRTLPFDKTLRTEFELGAVDVDLQQY 245 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 PI L L S F L L + L Sbjct: 246 WKYMPIKTPLE--LKSGRFTSDISLFFERPEAQRINLYLGGGGTLTDLELTAPGDGPVFS 303 Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344 + + + + + +VS + + ++N T +F E Sbjct: 304 MKKLAFEMERFSLGDNALVVKRVSMSQ-PFFKV---VRRADGEINWTGYFPGSEPGPTGP 359 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376 +K + + + N K+ +FS Sbjct: 360 KVKTEADTNAAFV-FDLRNFEIKDGTVDFSDQ 390 >gi|221214439|ref|ZP_03587410.1| conserved hypothetical protein [Burkholderia multivorans CGD1] gi|221165696|gb|EED98171.1| conserved hypothetical protein [Burkholderia multivorans CGD1] Length = 1377 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 97/332 (29%), Gaps = 37/332 (11%) Query: 1 MLRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGI 54 MLRRV + V + + +FR ER + + ++++ G + Sbjct: 1 MLRRVFKVTLAVAIGTYFVACGTFLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GKL 59 Query: 55 KIHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113 H P V + I ++ + + ++ LL + + +D+P L Sbjct: 60 SPHWSGMQPGVEVTHLTIRGRDG-QVALSVPHATAALSWMSLLRLSPALSSLIVDEPDLV 118 Query: 114 FYLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDL 165 ++ G + + + E I ++GG ++ D + D LS + Sbjct: 119 VARAADGSLSIAGVGVASAHGGNDTFGTWLLKQEAIVLRGGTLRWRDAQHDAPELALSGI 178 Query: 166 NLQISARFLNIISPLSIDSIK----GSVIAEGTGN---FDNKRSAFKITANFPAKNKAIS 218 L + + L + G + T N + Sbjct: 179 RLAVLNDGRLHKAALQAPANGTLLLGPLDFRARFTHKALAPIGKPSNWTGNAYLSTGPVD 238 Query: 219 LKIQLFPLAYPI-----IIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKK 269 L+ + P+ ID ++ + +G + G L L Sbjct: 239 LQTLARYVDMPLTIHAGRIDNAIWATFSNGRLRSAGG-DLQGADVALRVRPTQPRLDVPT 297 Query: 270 SRLSGNFKISDGN---VRISRYKLQSILPNSS 298 + + G + ++ + + P Sbjct: 298 VGFRWDLALDPGRDYTLHLTHFNAELGQPPLP 329 >gi|23502471|ref|NP_698598.1| AsmA family protein [Brucella suis 1330] gi|23348463|gb|AAN30513.1| AsmA family protein [Brucella suis 1330] Length = 645 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 31/311 (9%), Positives = 87/311 (27%), Gaps = 31/311 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79 VP + R ++ + G + ++ ++ + P + + + Sbjct: 27 VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126 + + + L + G I + I +PH+N +S G Sbjct: 87 LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146 Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 R + + GR+ + D S+ N+ + ++ + L Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240 + +G+ + K + F +T + + A P+ + G Sbjct: 207 WLRTSSAATLKGSAKWRGKATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291 + + + G + L+ L+ + ++ + ++ Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325 Query: 292 SILPNSSTDED 302 + + + Sbjct: 326 ANGSPAKGVIE 336 >gi|108757458|ref|YP_628465.1| asmA family protein [Myxococcus xanthus DK 1622] gi|108461338|gb|ABF86523.1| asmA family protein [Myxococcus xanthus DK 1622] Length = 900 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 47/367 (12%), Positives = 127/367 (34%), Gaps = 49/367 (13%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQA--TLIVGKKIAVKGGIKIHILP 60 RR LG +F+++++ +D + ++ A + ++G+ I + G I + P Sbjct: 10 RRWPYVLGGVFALLVIIVAVALWRLDAILLKTARDQAATYSQLLGRPIEI-GDISTKLFP 68 Query: 61 FPSVFFKDIRIDQKEDGS-FESKIEGLSMRAEFLPLLS---GEIRVFDMYIDQPHLNFYL 116 +++ + E +++ + +R PLLS +I+V + + +N Sbjct: 69 TIGAQVENVTVGPAEGEDLPLAQLALIDVRVAAGPLLSSSGKDIQVKNAEVSGLTVNLVR 128 Query: 117 SSKGVSNWF-----------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159 + G +N +S + V +E+ + G I+ +D+ + + Sbjct: 129 FADGTTNVQRLLQRLEEQQPKEEEAPAEESQPMDLSGVHVERAALTDGAIRFVDRGAGEQ 188 Query: 160 YF---LSDLNLQISARFLNIISPLSIDS--IKGSVIAEGTGNFDNKRSAF---------- 204 + DL++++ + +++ + + + + + + + Sbjct: 189 ARELGVKDLDIEVKDLRVGKPLVVNLAAAVLADTQNLQVSLHAAPLPATLVPTPERVTLK 248 Query: 205 --KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF---SK 259 KI + ++ L DL G + + G+ G S+ Sbjct: 249 AQKIDLAPLGPFLPPDIGLRAGTLDADWQADLGGAVPGGQGPTKLVGIIKALGLSFTGSE 308 Query: 260 LLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FS 318 + ++G+ + G++ +++ K+ +S K ++ + F Sbjct: 309 GGKALDVVMDTDVAGDI--NTGDLALNKLKVDLGP--ASLTGKGSVKGLLTDKPAVEGFE 364 Query: 319 ENGAESM 325 G Sbjct: 365 LTGRNLD 371 >gi|319403714|emb|CBI77299.1| AsmA family [Bartonella rochalimae ATCC BAA-1498] Length = 630 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 48/386 (12%), Positives = 111/386 (28%), Gaps = 64/386 (16%) Query: 1 MLRRVLIGLGFLFSVVL----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 M +++ L +F ++ VP + R + ++ G + ++ K+ Sbjct: 1 MRIKIIKFLSGIFIAIVFLVGAAVIIVPYIVSTDAIRIRLAQDLSVWTGYSVQLRDLPKL 60 Query: 57 HILPFPSVFFKDIRI-----DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111 I P+P F + + + ++E + + + LL G I + I P Sbjct: 61 KIFPYPKAFLSGVTLTPKMESAASLAAPLMEVESIEVDLSLISLLWGRISFSETRIMYPK 120 Query: 112 LNFYLSSKGVSNWFQRKSTMDMIHNVIL------------------------EKIHVKGG 147 +K +S++F + + +I ++ G Sbjct: 121 FIMDKPAKTISDFFDTLLRSQGAFGLAIQSAREIIKRNPDNPDVASLLNQPFGRIVIENG 180 Query: 148 RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207 + D S + ++ LN + + + ++ + + + I Sbjct: 181 TLMYRDDASVVMEQITGLN-----------ASIDWPGLTQAMQFRAKARWHGELTELFIN 229 Query: 208 ANFP---AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE 264 A+ SL++ + I L + I+ G S+ Sbjct: 230 ADQALLLLAGGKSSLQVSFNSVRGGITFKGQARLS---EYYIFDGKVSLRSPGWDQTVAW 286 Query: 265 LSA---------KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE-ENL 314 + +F +VR+S N+ + + Sbjct: 287 IGGNQLWGHGLKMPIVWESDFLAQPAHVRMSNVIFTMGTANA----RGALEFDFKNHVPV 342 Query: 315 LNFSENGAESMHDLNETDFFEEEEKK 340 L S + D+ + F E+K Sbjct: 343 LMGSLGFDKLDFDILKLLLFCSEQKN 368 >gi|265984642|ref|ZP_06097377.1| AsmA family protein [Brucella sp. 83/13] gi|264663234|gb|EEZ33495.1| AsmA family protein [Brucella sp. 83/13] Length = 619 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 30/310 (9%), Positives = 85/310 (27%), Gaps = 31/310 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80 VP + R ++ + G + ++ ++ + P + + + Sbjct: 2 VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127 + + + L + G I + I +PH+N +S G R Sbjct: 62 MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121 Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + + GR+ + D S+ N+ + ++ + L Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + +G+ + + + F +T + + A P+ + G Sbjct: 182 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI- 240 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292 + G + L+ L+ + ++ + ++ + Sbjct: 241 SGDRFFEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300 Query: 293 ILPNSSTDED 302 + + Sbjct: 301 NGSPAKGVIE 310 >gi|256370021|ref|YP_003107532.1| AsmA family protein [Brucella microti CCM 4915] gi|256000184|gb|ACU48583.1| AsmA family protein [Brucella microti CCM 4915] Length = 645 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 30/311 (9%), Positives = 87/311 (27%), Gaps = 31/311 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79 VP + R ++ + G + ++ ++ + P + + + Sbjct: 27 VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126 + + + L + G I + I +PH+N +S G Sbjct: 87 LMSTDRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146 Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 R + + GR+ + D S+ N+ + ++ + L Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240 + +G+ + + + F +T + + A P+ + G Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291 + + + G + L+ L+ + ++ + ++ Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325 Query: 292 SILPNSSTDED 302 + + + Sbjct: 326 ANGSPAKGVIE 336 >gi|261325662|ref|ZP_05964859.1| AsmA family protein [Brucella neotomae 5K33] gi|261301642|gb|EEY05139.1| AsmA family protein [Brucella neotomae 5K33] Length = 619 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 30/310 (9%), Positives = 87/310 (28%), Gaps = 31/310 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80 VP + R ++ + G + ++ ++ + P + + + Sbjct: 2 VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127 + + + L + G I + I +PH+N +S G R Sbjct: 62 MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121 Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + + GR+ + D S+ N+ + ++ + L Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + +G+ + + + F +T + + A P+ + G + Sbjct: 182 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 241 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292 + + G + L+ L+ + ++ + ++ + Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300 Query: 293 ILPNSSTDED 302 + + Sbjct: 301 NGSPAKGVIE 310 >gi|217970306|ref|YP_002355540.1| hypothetical protein Tmz1t_1893 [Thauera sp. MZ1T] gi|217507633|gb|ACK54644.1| protein of unknown function DUF748 [Thauera sp. MZ1T] Length = 1266 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 100/298 (33%), Gaps = 32/298 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LRR L + L ++ VP R ++ +G+++ V+ ++ I PF Sbjct: 18 LRRTLWTVAILLALSAAAYLAVPPV-----ARHYAQKLLGETLGREVVVE---RVLINPF 69 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + +RI + + + E L E LL I + ++ +D+P ++ L ++G Sbjct: 70 RLTAEVGGLRIMEADGSAEALGFESLRANLELESLLRKGIVLHELALDKPRVHVALEAEG 129 Query: 121 VSNWFQ-----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 NW + + I + G +++ D+ + LS+L + + Sbjct: 130 RHNWTDVLERIAALGGEEPAEDTPPTLFSIGNIRISDGLVRVDDRVRGITHELSELGVGV 189 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 P+ +D + + A+++ L + L Sbjct: 190 PFVS---NLPVRVDVFVQP---SLSAKLNGDALLLNARTKPFAESQETILDVSLK----- 238 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 DL + + +P + ++ +L + LS + + + Sbjct: 239 -EFDLTPWIAYLPIEPRFRLPSALLTTNLELSFSQTVEGAPVLSLRGPLQVHKLVLQD 295 Score = 39.5 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 6/82 (7%), Positives = 26/82 (31%), Gaps = 3/82 (3%) Query: 44 VGKKIAVKGGIKIHILPFPS--VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIR 101 +++ ++ + + + + +E + + + + + + G Sbjct: 264 TNLELSFSQTVEGAPVLSLRGPLQVHKLVLQDREGA-PVATADEVELEFADVQPMIGRWH 322 Query: 102 VFDMYIDQPHLNFYLSSKGVSN 123 + + +P L+ G N Sbjct: 323 FTRLRLARPELDLVRLKDGGLN 344 >gi|265991655|ref|ZP_06104212.1| AsmA family protein [Brucella melitensis bv. 1 str. Rev.1] gi|263002439|gb|EEZ15014.1| AsmA family protein [Brucella melitensis bv. 1 str. Rev.1] Length = 619 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 30/310 (9%), Positives = 87/310 (28%), Gaps = 31/310 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80 VP + R ++ + G + ++ ++ + P + + + Sbjct: 2 VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127 + + + L + G I + I +PH+N +S G R Sbjct: 62 MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121 Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + + GR+ + D S+ N+ + ++ + L Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + +G+ + + + F +T + + A P+ + G + Sbjct: 182 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 241 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292 + + G + L+ L+ + ++ + ++ + Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300 Query: 293 ILPNSSTDED 302 + + Sbjct: 301 NGSPAKGVIE 310 >gi|312112905|ref|YP_004010501.1| hypothetical protein Rvan_0112 [Rhodomicrobium vannielii ATCC 17100] gi|311218034|gb|ADP69402.1| hypothetical protein Rvan_0112 [Rhodomicrobium vannielii ATCC 17100] Length = 601 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 89/275 (32%), Gaps = 7/275 (2%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED 76 + A VP F D R+ F + + G K+ + G ++I SV D+R Sbjct: 45 VFFAVAVPRFFDGDVARKSFVKALSAWSGGKVTLAGQLRIASFATLSVEASDVRFHDAPG 104 Query: 77 GSFE--SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134 E ++ LL G++ + P + G + + + + Sbjct: 105 LDPVQRGSAETVTAVVNLSSLLLGDLEYRKFVVSSPRFVLKRDAGGRAADELAAARLALT 164 Query: 135 --HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE 192 L I ++ I D ++ + + +P ++ K Sbjct: 165 LVDRSSLPDIQLRDPVFYIADGALRPYRRVAFERITLKRPDSAAAAPFALSMRKPGFELA 224 Query: 193 GTGNFDNKRSAFKITANFPAKN-KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 G + ++ + ++ + A L L P L G+L W+ ++ Sbjct: 225 FKGERNGQKVSGQLKLVAAGDHPLAAHLIAALAPWETATGFSLEGDLTWSRERFSLDNAS 284 Query: 252 SVAGDFSKL--LNLELSAKKSRLSGNFKISDGNVR 284 GD + L L++S +RL G +V Sbjct: 285 LSFGDRTATGVLALDVSDDPARLEGTLAYDTLDVT 319 >gi|261219727|ref|ZP_05934008.1| AsmA family protein [Brucella ceti M13/05/1] gi|261222741|ref|ZP_05937022.1| AsmA family protein [Brucella ceti B1/94] gi|261318210|ref|ZP_05957407.1| AsmA family protein [Brucella pinnipedialis B2/94] gi|261322617|ref|ZP_05961814.1| AsmA family protein [Brucella ceti M644/93/1] gi|265989242|ref|ZP_06101799.1| AsmA family protein [Brucella pinnipedialis M292/94/1] gi|265998703|ref|ZP_06111260.1| AsmA family protein [Brucella ceti M490/95/1] gi|260921325|gb|EEX87978.1| AsmA family protein [Brucella ceti B1/94] gi|260924816|gb|EEX91384.1| AsmA family protein [Brucella ceti M13/05/1] gi|261295307|gb|EEX98803.1| AsmA family protein [Brucella ceti M644/93/1] gi|261297433|gb|EEY00930.1| AsmA family protein [Brucella pinnipedialis B2/94] gi|262553327|gb|EEZ09161.1| AsmA family protein [Brucella ceti M490/95/1] gi|264661439|gb|EEZ31700.1| AsmA family protein [Brucella pinnipedialis M292/94/1] Length = 619 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 30/310 (9%), Positives = 87/310 (28%), Gaps = 31/310 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80 VP + R ++ + G + ++ ++ + P + + + Sbjct: 2 VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127 + + + L + G I + I +PH+N +S G R Sbjct: 62 MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121 Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + + GR+ + D S+ N+ + ++ + L Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + +G+ + + + F +T + + A P+ + G + Sbjct: 182 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 241 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292 + + G + L+ L+ + ++ + ++ + Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300 Query: 293 ILPNSSTDED 302 + + Sbjct: 301 NGSPAKGVIE 310 >gi|116623043|ref|YP_825199.1| hypothetical protein Acid_3947 [Candidatus Solibacter usitatus Ellin6076] gi|116226205|gb|ABJ84914.1| protein of unknown function DUF490 [Candidatus Solibacter usitatus Ellin6076] Length = 1605 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 51/376 (13%), Positives = 114/376 (30%), Gaps = 31/376 (8%) Query: 3 RRVLIGLGF-LFSVVLVGAFTVPLFIDWTDFREDFERQ----ATLIVGKKIAVKGGIKIH 57 R++ +G + +VLV + FR+ + G K+ + Sbjct: 5 RKIAAIVGGSILGLVLVVFLAGIAIVRTEWFRDMVRSKLVTVVENATGGKVEIG---SFA 61 Query: 58 I-LPFPSVFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 +D I + + + + L + + L G + + ++ +D P N Sbjct: 62 FDWTHLRAQVRDFVIHGLEPAGAAPLLRADLLQVDLKLLSPFKGFVDIANLLVDTPQANV 121 Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKI-HVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 + + G +N K +E I + G ++ + ++LN Sbjct: 122 IIFADGRTNVPNPKVQPKSSDKTAVETIVDLAIGHFELRNGSFTFAERKTELNANGEKLR 181 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 + +V TG D K AN PA + + L + + + Sbjct: 182 AMLYYS--------AVNPRYTGQIDIAPLHVKAGAN-PAVDINVKLPLTMEKDKISLSA- 231 Query: 234 LFGNLFWNEKQPIYSGVFSVAGD--FSKLLNLELSAKKSRLSGNFKISDGNVRISRY--K 289 + E + + +G + L +++ + + + V R Sbjct: 232 --AEITTPESRLVITGAMEHLTAPRTNVHLKAQIALDEVKRVAGLTLPLDTVHAPRMLDA 289 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349 + N S ++S + N G + N + E + K + Sbjct: 290 EITGSMNESRIALQDARLSIGKTN---LEATGTLAALQFNTSIALGEVGRLFKVSARPEG 346 Query: 350 DIQYSVNKKEEKDNSH 365 +Q N + +N++ Sbjct: 347 TLQAGGNLTLDANNNY 362 >gi|148252159|ref|YP_001236744.1| putative AsmA-like protein [Bradyrhizobium sp. BTAi1] gi|146404332|gb|ABQ32838.1| putative AsmA-like protein [Bradyrhizobium sp. BTAi1] Length = 705 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 97/288 (33%), Gaps = 25/288 (8%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAE 91 + + G ++++ G I + P DI + + DG+ + L Sbjct: 33 AAIQDRVERDTGYRLSIAGSASISLWPSLHATLTDITLLDPKDRDGNNRLTVAKLQADMA 92 Query: 92 FLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR---KSTMDMIHNVILEKIHVKGGR 148 L SG + ++ +D+P L L + + + R + D ++ +E++ ++ G Sbjct: 93 LSGLWSGRPDIAEVIVDKPTLYLPLLRERLRDNAPRNRAPAKSDAAPSIRIERVTIRDGA 152 Query: 149 IKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208 + + + + + + G + GT ++ +F++ + Sbjct: 153 VILSNPRDRVENRIDGI------------GATASLGGDGRIKLTGTARASDRPVSFEVNS 200 Query: 209 ---NFPAKNKAISLKIQLFP-LAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLLNL 263 P + + ++ +L A+ ++ +L N + +G ++ G Sbjct: 201 TAPGMPIDRQTLPVEFKLEMADAFRGVLAGRADLRLNGPLVMINGLSGTLGGGDFNGWAS 260 Query: 264 ELSAKKSRLSGNFK---ISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308 A K + + + G+ R S ++ D V Sbjct: 261 VDVASKPLVKLDLDVRRLDLGSPAAPRNAGASGWSTAAIDLRGLNYVD 308 >gi|319406722|emb|CBI80355.1| AsmA family [Bartonella sp. 1-1C] Length = 630 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 45/377 (11%), Positives = 111/377 (29%), Gaps = 58/377 (15%) Query: 1 MLRRVLIGLGFLFSVVL----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 M +++ L +F ++ VP + R + ++ G + ++ ++ Sbjct: 1 MRIKIIKFLSGIFIAIVFLVGAAVIIVPYIVSTDAIRIRLAQDLSVWTGYSVQLRDPPRL 60 Query: 57 HILPFPSVFFKDIRID-----QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111 I P+P F + + + ++E + + + LL G I + I P Sbjct: 61 KIFPYPKAFLSGVTLTPKMEIAASLAAPLMEVESIEVDLSLVSLLWGRISFSETRIMYPK 120 Query: 112 LNFYLSSKGVSNWFQRKSTMDMIHNVIL------------------------EKIHVKGG 147 K +S++F S + + +I ++ G Sbjct: 121 FIMDKPVKTISDFFDTLSRSQGAFGLAIQSAREIIKHNPDNPDVASLLNQPFGRIVIENG 180 Query: 148 RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207 + D S + ++ LN + + + ++ ++ + + I Sbjct: 181 TLMYRDGSSVVMEQITGLN-----------ASIDWPRLTQAMQFRAKAHWHGELTELFIN 229 Query: 208 ANFPA-------KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL 260 A+ + +S + + L ++ K + S + + Sbjct: 230 ADQALLLLAGGKSSLQVSFNSVRGGITFKGHARLSEYYIFDGKISLCSPSWDQTVAWIGG 289 Query: 261 LNLELSAKKSRL--SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE-ENLLNF 317 K + +F +VR+S N+ + +L Sbjct: 290 NQFWGHGLKIPIVWESDFLAQPAHVRMSNVIFTMGTANA----RGALEFDFKNHVPVLMG 345 Query: 318 SENGAESMHDLNETDFF 334 S + D+ + FF Sbjct: 346 SLGFDKLDFDILKFLFF 362 >gi|86141820|ref|ZP_01060344.1| outer membrane assembly protein [Leeuwenhoekiella blandensis MED217] gi|85831383|gb|EAQ49839.1| outer membrane assembly protein [Leeuwenhoekiella blandensis MED217] Length = 891 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 94/299 (31%), Gaps = 32/299 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI 58 ++++ +G + V++VG P FR E + + I + + Sbjct: 1 MKKIFKIIGIVLLVLIVGLIAAPFL-----FRGPLEDLLKRSINENINATVAWEDFDLTL 55 Query: 59 ---LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLS----GEIRVFDMYIDQ 109 P +V + + G + L + + L I + + +D Sbjct: 56 FSSFPDAAVKVNNFTVVNNAPFAGDTLASGAVLQLDMGVMQLFKTSSGEPIAIDAIRLDD 115 Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIH------------NVILEKIHVKGGRIKIIDQESD 157 ++N + S G +N+ K + ++ + RI +D+ + Sbjct: 116 AYVNIKVDSLGNANYDIAKENPNATATADTLADSSGGFRFAVQHYELNNSRINYLDESTQ 175 Query: 158 QVYFLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKA 216 LS++N + F IS L+ + S +G +N + + + Sbjct: 176 TFLRLSEVNHEGDGDFSAAISNLNTKTEALASFDLDGVNYLNNNKLSLDAVIEMNLDEQR 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSG 274 + K + L + + G + NE F DF L + L G Sbjct: 236 YTFK-ENEALVNQLPLVFEGFVQINEANNELDLSFETPTSDFKNFLGVIPEVYAKNLDG 293 >gi|241765469|ref|ZP_04763436.1| AsmA family protein [Acidovorax delafieldii 2AN] gi|241364779|gb|EER59768.1| AsmA family protein [Acidovorax delafieldii 2AN] Length = 388 Score = 86.9 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 34/238 (14%), Positives = 63/238 (26%), Gaps = 26/238 (10%) Query: 74 KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM 133 + + + + S LPLLS + + + P + G +NW T Sbjct: 143 TDQTAPMATVASASATLHLLPLLSRHLAFDTVVLSAPDVALERHMDGRNNWTFTPRTPRN 202 Query: 134 ----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189 +++ V+ GR+ +D L L L P S + V Sbjct: 203 DGRAPWQFTVDQFAVRQGRLAYVDP-------LRKLQLAARI----HTLPPSQADGRYGV 251 Query: 190 IAEGTGNFDNKRSAFKITANFP--AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 E G F R A +++ ++ +Q A + + G L Sbjct: 252 HFEVEGRFAKARIEGSGKAGPLLSLRDRIVNYPLQFEARAGSVATSVEGTLANPRALKGM 311 Query: 248 SGVFSVAGDFSKLLNLELSAKKSR---------LSGNFKISDGNVRISRYKLQSILPN 296 + L L G+ + S + + Sbjct: 312 DLQVMLQASSMADLYELTGLVLPNTPPFRTRGHLRGSLEPGHAVWDYSDFAGTVGESD 369 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 6/66 (9%), Positives = 17/66 (25%), Gaps = 13/66 (19%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKI-------------HILPFPSVFFKDIRIDQ 73 DW + + + G+ + G + +P ++ + I + Sbjct: 25 FDWNRAKPWISERVSESAGRSFEIAGNLNATWHWPDPLAEGWRRWIPGITLQAERITLGN 84 Query: 74 KEDGSF 79 Sbjct: 85 PPGFGT 90 >gi|62290488|ref|YP_222281.1| AsmA family protein [Brucella abortus bv. 1 str. 9-941] gi|82700411|ref|YP_414985.1| AsmA [Brucella melitensis biovar Abortus 2308] gi|189024712|ref|YP_001935480.1| AsmA [Brucella abortus S19] gi|254697931|ref|ZP_05159759.1| AsmA [Brucella abortus bv. 2 str. 86/8/59] gi|254730821|ref|ZP_05189399.1| AsmA [Brucella abortus bv. 4 str. 292] gi|260547016|ref|ZP_05822755.1| AsmA protein [Brucella abortus NCTC 8038] gi|62196620|gb|AAX74920.1| AsmA family protein [Brucella abortus bv. 1 str. 9-941] gi|82616512|emb|CAJ11579.1| AsmA [Brucella melitensis biovar Abortus 2308] gi|189020284|gb|ACD73006.1| AsmA [Brucella abortus S19] gi|260096066|gb|EEW79943.1| AsmA protein [Brucella abortus NCTC 8038] Length = 645 Score = 86.9 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 30/311 (9%), Positives = 86/311 (27%), Gaps = 31/311 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79 VP + R ++ + G + ++ ++ + P + + + Sbjct: 27 VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126 + + + L + G I + I +PH+N +S G Sbjct: 87 LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146 Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 R + + GR+ + D S+ N+ + ++ + L Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240 + +G+ + + + F +T + + A P+ + G Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291 + + + G + L+ L+ + ++ + ++ Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325 Query: 292 SILPNSSTDED 302 + + Sbjct: 326 ANGSPVKGVIE 336 >gi|254708266|ref|ZP_05170094.1| AsmA [Brucella pinnipedialis M163/99/10] Length = 645 Score = 86.9 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 30/311 (9%), Positives = 86/311 (27%), Gaps = 31/311 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79 VP + R ++ + G + ++ ++ + P + + + Sbjct: 27 VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126 + + + L + G I + I +PH+N +S G Sbjct: 87 LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146 Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 R + + GR+ + D S+ N+ + ++ + L Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240 + +G+ + + + F +T + + A P+ + G Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291 + + + G + L+ L+ + ++ + ++ Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325 Query: 292 SILPNSSTDED 302 + + Sbjct: 326 ANGSPVKGVIE 336 >gi|261755548|ref|ZP_05999257.1| AsmA family protein [Brucella suis bv. 3 str. 686] gi|261745301|gb|EEY33227.1| AsmA family protein [Brucella suis bv. 3 str. 686] Length = 619 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 31/310 (10%), Positives = 87/310 (28%), Gaps = 31/310 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80 VP + R ++ + G + ++ ++ + P + + + Sbjct: 2 VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127 + + + L + G I + I +PH+N +S G R Sbjct: 62 MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121 Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + + GR+ + D S+ N+ + ++ + L Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + +G+ + K + F +T + + A P+ + G + Sbjct: 182 LRTSSAATLKGSAKWRGKATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 241 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292 + + G + L+ L+ + ++ + ++ + Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300 Query: 293 ILPNSSTDED 302 + + Sbjct: 301 NGSPAKGVIE 310 >gi|213027293|ref|ZP_03341740.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 95 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 37/94 (39%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95 S+ + + + + + + + Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALGRF 94 >gi|253699185|ref|YP_003020374.1| hypothetical protein GM21_0539 [Geobacter sp. M21] gi|251774035|gb|ACT16616.1| protein of unknown function DUF748 [Geobacter sp. M21] Length = 1208 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 95/325 (29%), Gaps = 33/325 (10%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKE 75 + +P+ + R G+++ + + I PF +V +D+ I +K Sbjct: 20 VFVTAVLPIIV-----RNKTVSALKEATGREVRLS---SVSINPFTLTVTMRDLAIAEKT 71 Query: 76 DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--------R 127 + + ++ +D P ++ S+ N+ Sbjct: 72 G-PPLVAFREAKASLALASIYKRAFILSELALDTPSVSLVRSAPNRFNFSDIIDRQPKGE 130 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 K L I VK G + D+ + + + DL + I Sbjct: 131 KPEQGKPLLFSLNNIIVKNGSVDFDDRMTAGGRKHAVRDLQISIPFISNIPYLADRY--- 187 Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 V + +F +K+ S+ I L L+ P + Sbjct: 188 ---VDPRLAAVVNGAPFSFAGKLKPLSKSLETSVHIGLKGLSLPQYL---AYAPAPPPVD 241 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 + SG ++ L + KK L VR+++ + +L S + Sbjct: 242 LTSGRLTL---DMDLAYRVSAEKKPELILKGGAGLAMVRVNQLDGKPLLRLPSLELKADR 298 Query: 306 KVSQDEENLL-NFSENGAESMHDLN 329 + + + NG E D + Sbjct: 299 LEVLAKSFAFGSIALNGLELFVDRD 323 >gi|325266490|ref|ZP_08133167.1| AsmA family protein [Kingella denitrificans ATCC 33394] gi|324981933|gb|EGC17568.1| AsmA family protein [Kingella denitrificans ATCC 33394] Length = 715 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 39/334 (11%), Positives = 98/334 (29%), Gaps = 18/334 (5%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 ++ G+ L L ++ F + + G ++ I+ + P P+ Sbjct: 15 KLAYGILSLVLAYLGAYASLYRFANHDVLSQRANSAM-QKTGYRVTFDKNIQRSLFPRPT 73 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 V ++ R+ + + I + + + + G+ + + ++ Y ++K N Sbjct: 74 VTIRNARLQTPQGETD-LTIGEVRVGMAWSSIF-GQPEIEKLVLNHAEGTVYRTAKNEWN 131 Query: 124 WF-QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 +I + R+ I + L ++ LQ+ + Sbjct: 132 VASWLPQEEGGEPIPSFNRIMMNESRLNIT--YGAHHFSLQNIQLQVYPANNGHAYRIQA 189 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242 D+ ++ + +AF + + I L+ Y L + W Sbjct: 190 DTPHADWQ---NLHWQAQGTAFLQQGSLHLPD--IRLQFNGKAQDYTFTGSLQSAIQW-- 242 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 + S + LSA +L+ K + + + Sbjct: 243 QHEQLSAKNIRITADGEQYQTHLSATIDQLTHRHK--EQQTLLKNLTATVNTATDNRQIR 300 Query: 303 NKTKVSQDEENLLNFSENGAESMHD---LNETDF 333 + +Q + + + + + LN T Sbjct: 301 GTLRTAQAQFDEQRAHSDEIQLNLNHSRLNNTPI 334 >gi|225628040|ref|ZP_03786076.1| AsmA family protein [Brucella ceti str. Cudo] gi|225617203|gb|EEH14249.1| AsmA family protein [Brucella ceti str. Cudo] Length = 646 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 29/309 (9%), Positives = 86/309 (27%), Gaps = 31/309 (10%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFES 81 P + R ++ + G + ++ ++ + P + + + Sbjct: 30 PFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPLM 89 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQRK 128 + + + L + G I + I +PH+N +S G R Sbjct: 90 SADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIRA 149 Query: 129 STMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + GR+ + D S+ N+ + ++ + L Sbjct: 150 QRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEWP 209 Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWNE 242 + +G+ + + + F +T + + A P+ + G + Sbjct: 210 RTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANISR 269 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSI 293 + + G + L+ L+ + ++ + ++ + Sbjct: 270 DRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTAN 328 Query: 294 LPNSSTDED 302 + + Sbjct: 329 GSPAKGVIE 337 >gi|212703704|ref|ZP_03311832.1| hypothetical protein DESPIG_01751 [Desulfovibrio piger ATCC 29098] gi|212672856|gb|EEB33339.1| hypothetical protein DESPIG_01751 [Desulfovibrio piger ATCC 29098] Length = 666 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 98/301 (32%), Gaps = 27/301 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++RVL +G + V+ V +D G + ++ +LP Sbjct: 1 MKRVLCWIGGIVLVLAAVLAIVISQLDTEFISGQISAAVEKATGTPVRFASPPELSLLP- 59 Query: 62 PSVFFKDIRIDQKEDGSFE-SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 P F + D +DG G E PLL GE+ + ++ +D P L+ L +G Sbjct: 60 PGAKFASVSWDGVQDGQGMRFTARGGEAHLELEPLLHGELVIGEVRLDSPSLS-LLLPEG 118 Query: 121 VSNWFQR---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 + K +++ + L ++ + G + + ++ + Y L D+NL + Sbjct: 119 KAAAPAGVASGKVAGNKPGSEVLLPLELGRLTLSKGSLHV--EKGGERYDLRDINLSVEN 176 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 + L + T + T A+ + ++ L+ I Sbjct: 177 LRNGQDAVLRC---------DFTYDLLTAGRTLAGTLALDAQAGLFGMAPRVQNLSLTIT 227 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDF----SKLLNLELSAKKSRLSGNFKISDGNVRISR 287 G L G S+ L+L + + L+G + S Sbjct: 228 PSRRGLLPAGLGPVQLQGDASLDTAARQLHLSRLSLSVPHGRVGLTGTLGLDGPTFTGSA 287 Query: 288 Y 288 Sbjct: 288 L 288 >gi|300310753|ref|YP_003774845.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gi|300073538|gb|ADJ62937.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 1439 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 93/307 (30%), Gaps = 30/307 (9%) Query: 9 LGFLFSVVLVGAFTVPLFI---------DWTDFREDFERQATLIVGKKIAVKGGIKIHI- 58 LGF ++L G F + ++ ER + +G+ +++ I Sbjct: 37 LGFTVKLLLAGYFIFCALFLVLRYAVLPEIGHYKPQIERLVSAQIGRAVSID-VINASWR 95 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 P + +I + + G + +S + ++ +R+ ++ I+ L + Sbjct: 96 GLRPQLSLTNITVHD-QQGEPALTLPQVSTTLSWSSVVVASLRLENLSIEGADLAIRRDA 154 Query: 119 KGVSNWFQRKSTMDM-----IHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISAR 172 G + +I ++ +++ D+ L D+NL + R Sbjct: 155 GGKLFVAGIPVPTGGDGSSLDWLLSQREIVIRHSKLRWDDELRQAPELVLEDVNLVLHNR 214 Query: 173 FLNIISPLSI---DSIKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAISLKIQLFPL 226 +L L S + + F + A + L + Sbjct: 215 WLRHRLSLRAIPPTSYAAPLDVRADFSHPAFARSSDILRWKGTLYADLQRTDLSVWRAYF 274 Query: 227 AYPIII-DLFGNLFWNEKQ-----PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280 YPI I G++ ++ ++ ++L R++G S+ Sbjct: 275 DYPIAIQSGTGSVRAWLALDHAKVANFTADLALNNFNAQLSRQLEPLSLKRVNGRISASE 334 Query: 281 GNVRISR 287 Sbjct: 335 SLGATPE 341 >gi|17986698|ref|NP_539332.1| hypothetical protein BMEI0415 [Brucella melitensis bv. 1 str. 16M] gi|17982320|gb|AAL51596.1| hypothetical protein BMEI0415 [Brucella melitensis bv. 1 str. 16M] Length = 618 Score = 86.5 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 29/310 (9%), Positives = 87/310 (28%), Gaps = 31/310 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80 +P + R ++ + G + ++ ++ + P + + + Sbjct: 1 MPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 60 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127 + + + L + G I + I +PH+N +S G R Sbjct: 61 MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 120 Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + + GR+ + D S+ N+ + ++ + L Sbjct: 121 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 180 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + +G+ + + + F +T + + A P+ + G + Sbjct: 181 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 240 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292 + + G + L+ L+ + ++ + ++ + Sbjct: 241 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 299 Query: 293 ILPNSSTDED 302 + + Sbjct: 300 NGSPAKGVIE 309 >gi|313157485|gb|EFR56904.1| hypothetical protein HMPREF9720_1119 [Alistipes sp. HGB5] Length = 821 Score = 86.5 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 44/326 (13%), Positives = 98/326 (30%), Gaps = 31/326 (9%) Query: 13 FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID 72 ++++ A V + E+ ++G+ I ++ ++++I + + +RI Sbjct: 2 AVLIVIAAIAVSPV-----AKNYIEKHDRELIGRSIRME-RLRMNIFTG-RLRIEGLRIG 54 Query: 73 QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG------------ 120 ED + +++ MR PLL + V + P + Y Sbjct: 55 GSEDSTTFFRLDSFEMRMRLWPLLGNRVLVKKISFAGPDVKIYQRGNAFSFDDITARFAG 114 Query: 121 -VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII-- 177 + + + I ++ GR+ D D + ++DLNL I + + Sbjct: 115 DTTAVAATPEKTSKPWEIGIYDISIRNGRVFYKDLALDAEWGMNDLNLHIPGVYFSGEKT 174 Query: 178 --SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKIQLFPLAYPIIIDL 234 + + GS+ + N ++ I A + + L A + Sbjct: 175 DVGAVLNFAEGGSLSTDVGYNIESSEFDIGIRLQDFALAGTLPYFRQSLDVTAVDGRLSA 234 Query: 235 FGNLFWNEK---QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF---KISDGNVRISRY 288 L N + G S+AG + A L + R Sbjct: 235 DSRLRGNTQHLLSLTTEGTASLAGFALRDRQQRPVAGVDTLGVKLAEGDLGKMRFVFDRI 294 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENL 314 + + + + + Sbjct: 295 YVSGLSALFEMTPEGNNLAALMKSPA 320 >gi|168701238|ref|ZP_02733515.1| hypothetical protein GobsU_17066 [Gemmata obscuriglobus UQM 2246] Length = 1329 Score = 86.5 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 52/379 (13%), Positives = 114/379 (30%), Gaps = 20/379 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-- 59 LR LIG+G L ++V+V + +++ + R+ + +G + V + + Sbjct: 8 LRWALIGVGGLLAIVVVLRVGLGVYLATGAGKGLVARKISAQIGMPVEVT---SVRLGLV 64 Query: 60 -PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 + D S +E S L + I + + +L ++SS Sbjct: 65 TSSIGLKLFDPA-APAGGKSEVFAVEDASADISLFGLATSRISPQQVTLRGVNLTLHVSS 123 Query: 119 KGVSNWFQRKSTMDMIH-NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 G K L I + GR+ I + L +LN ++ ++ Sbjct: 124 DGKVVTTLPKMPESGGSGGGTLPNIVLADGRLTIRQD-GRPEFALHNLNATVTPAGDRVV 182 Query: 178 SPLSIDSIK-GSVIAEGTGNFDNKRSAFKITA--NFPAKNKAISLKIQLFPLAYPIIIDL 234 ++D +G + + ++ S+ + I D Sbjct: 183 IDGTMDDPAWSQWTLKGEIAKNGSAGEVRFETPDGPLTMDRLESVPFVPASVWKSIRADG 242 Query: 235 FGNLF---WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 G + W + + + + L + S ++++G ++ +++ K Q Sbjct: 243 RGAVAVRLWTDSSADVHYAVDIKPNEASLTLPDASVTLAKVTGLINLTGAKIKLVGAKAQ 302 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 + D E L + + DL + + + D+ Sbjct: 303 L--AGGTLAVDGVA--DFAPEPTL-VTLKATAANLDLKQLPPEWKLPRDMDGKLQGSADV 357 Query: 352 QYSVNKKEEKDNSHDKENQ 370 V S E Sbjct: 358 SLQVFADGRLVPSGSGEGA 376 >gi|260169266|ref|ZP_05756077.1| AsmA family protein [Brucella sp. F5/99] gi|261758779|ref|ZP_06002488.1| AsmA family protein [Brucella sp. F5/99] gi|261738763|gb|EEY26759.1| AsmA family protein [Brucella sp. F5/99] Length = 645 Score = 86.5 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 29/309 (9%), Positives = 86/309 (27%), Gaps = 31/309 (10%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFES 81 P + R ++ + G + ++ ++ + P + + + Sbjct: 29 PFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPLM 88 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQRK 128 + + + L + G I + I +PH+N +S G R Sbjct: 89 SADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIRA 148 Query: 129 STMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + GR+ + D S+ N+ + ++ + L Sbjct: 149 QRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEWP 208 Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWNE 242 + +G+ + + + F +T + + A P+ + G + Sbjct: 209 RTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANISR 268 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSI 293 + + G + L+ L+ + ++ + ++ + Sbjct: 269 DRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTAN 327 Query: 294 LPNSSTDED 302 + + Sbjct: 328 GSPAKGVIE 336 >gi|126658898|ref|ZP_01730041.1| hypothetical protein CY0110_20293 [Cyanothece sp. CCY0110] gi|126619848|gb|EAZ90574.1| hypothetical protein CY0110_20293 [Cyanothece sp. CCY0110] Length = 1981 Score = 86.5 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 115/337 (34%), Gaps = 32/337 (9%) Query: 6 LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65 LI G L S+ + V F+ + +Q + + +++ V + + Sbjct: 33 LIAGGVLLSLGVAAYGGVNYFV-YNQLSPLLSQQLSKALEREVRVGEVESFSLN---RIR 88 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 I E+ ++GL+++ LPLL G+ D+ ID P+L + G F Sbjct: 89 IGQTSIPTTENDPDRVDLDGLTIQFNPLPLLIGQPLDLDITIDDPNLYVEQNPSGKWLGF 148 Query: 126 QRKSTMDMIH---NVILE-KIHVKGGRIKIIDQESDQVYFLS----DLNLQISARFLNII 177 Q + ++ V ++ I + I ++ ++ + S I Sbjct: 149 QEREQIEDTELNLPVDIDADIQLNNANIALLPNGFKELIEVDAEGTAGYTYRSNEEQEIS 208 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 L + + ++ +G N + ++ ++ + A + +L L +++ N Sbjct: 209 YNLDVSLLNSAIAVKGETNIKSFQTQAELMISQLALPELAALIPNLPVTLKSGLVESNLN 268 Query: 238 LFWNE----KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 + + +G F ++ + L L++ +L ++ V+ + +L Sbjct: 269 INVPSLEEIEGTEGNGNFQLSNVQAGLDALKVP---IKLDLGLNFNNKTVQFNETRLSL- 324 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330 K +G + D+N Sbjct: 325 ---------GKFVTDIKGSLNWQ---DGYDIDVDINP 349 >gi|254694276|ref|ZP_05156104.1| AsmA [Brucella abortus bv. 3 str. Tulya] Length = 645 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 29/311 (9%), Positives = 85/311 (27%), Gaps = 31/311 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79 VP + R ++ + G + ++ ++ + P + + + Sbjct: 27 VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126 + + + L + G I + I +PH+N +S G Sbjct: 87 LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146 Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 R + + G + + D S+ N+ + ++ + L Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGHVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240 + +G+ + + + F +T + + A P+ + G Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291 + + + G + L+ L+ + ++ + ++ Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325 Query: 292 SILPNSSTDED 302 + + Sbjct: 326 ANGSPVKGVIE 336 >gi|284103083|ref|ZP_06386063.1| AsmA family protein [Candidatus Poribacteria sp. WGA-A3] gi|283830285|gb|EFC34525.1| AsmA family protein [Candidatus Poribacteria sp. WGA-A3] Length = 1130 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 70/191 (36%), Gaps = 10/191 (5%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 +R++ L +F + + G V F D + +G + ++ +++ LP+P Sbjct: 6 KRLISSLFLVFILCVAGVVYVATF-HVEDLQRMARDLIAGSLGDHVVIE-DMQVRFLPYP 63 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 V D+ ++ G+ + + + L L+ + + I+ +L+ + G Sbjct: 64 QVDLTDVSVNDPRQGTPIFQASHIQLDLNVLSLMQQTLMPNALLIEDAYLDLERNENGQW 123 Query: 123 NWFQRKSTMDMIH-----NVILEKIHVKGGRIKIIDQESDQVYFL---SDLNLQISARFL 174 N+ + + + G + D+ + + ++ LQ+ L Sbjct: 124 NYRDIFQPDAAGQVGIGTWLSGRSLTLTNGSVHFEDRYRRESALVVHAEEVELQVEQLVL 183 Query: 175 NIISPLSIDSI 185 + + + + + Sbjct: 184 DGTTEMFLSAR 194 >gi|75677214|ref|YP_319635.1| hypothetical protein Nwi_3033 [Nitrobacter winogradskyi Nb-255] gi|74422084|gb|ABA06283.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255] Length = 649 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 91/298 (30%), Gaps = 35/298 (11%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAE 91 + + G +IA+ G I + P P + D+ + + + E Sbjct: 34 SLVQDRIERDTGYRIAINGTTGIELWPSPGFALHHVTFDRPGSAATDAQLAVGEVRATLE 93 Query: 92 FLPLLSGEIRVFDMYIDQPHLN--FYLSSKGVSNWFQRKSTMDMIHN---VILEKIHVKG 146 LLSG +++ ++ ID P L G + + + + + ++ V Sbjct: 94 LAGLLSGTLKISELTIDHPTLRAPLLRERTGGGVPSRPDRSEETAGDDTAFPIGRVTVSN 153 Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKI 206 G I D ++ + D+N + + G + F I Sbjct: 154 GAIVFFDPQTGWEDRIDDVNASVRLGADRR------------INITGDARPGGRSLTFAI 201 Query: 207 TANFPAKNK---AISLKIQLFPLAYPII-IDLFGNLFWNEKQPI------------YSGV 250 A PA I ++ L P + + N + + ++G Sbjct: 202 AATPPAGPLGRRNIPTELTLEVSGAPTRQLTARAEVRINRQTLLINGLSGSLDDGKFNGW 261 Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308 SV L+ ++L +K LS + ++ + ++ D V Sbjct: 262 ASVDLASKPLVKVDLDFQKLDLSAAPSEASAPRSGAQPSSEQSWSDAPIDVGGLNYVD 319 >gi|116625557|ref|YP_827713.1| hypothetical protein Acid_6504 [Candidatus Solibacter usitatus Ellin6076] gi|116228719|gb|ABJ87428.1| conserved hypothetical protein [Candidatus Solibacter usitatus Ellin6076] Length = 513 Score = 86.1 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 116/365 (31%), Gaps = 30/365 (8%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE--DGSFESKIE 84 ID FR E++ T ++G+++ + G +K+ IL SV D+ I K + Sbjct: 15 IDPNHFRPTLEQELTKVLGREVKL-GELKLSILSG-SVTANDLSIADDPAYSRDAFVKAK 72 Query: 85 GLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKGVSNWF------------QRKSTM 131 L + E PLL S ++ V + I+QP + G N+ Sbjct: 73 SLGVGVELWPLLTSRQLHVTGLTIEQPSIALIQFPNGEWNFSKLGGDKMPAKVAAAPPPA 132 Query: 132 DMIHNVILEKIHVKGGRIK-IIDQESDQVYFLSDLNLQISARFLNIISPLSID---SIKG 187 ++ ++ + + GG + + L D+NL+I P + + G Sbjct: 133 SSAMDLSVKLVRITGGHFSVLRVGGHARPLVLDDVNLEIRDFSAGSAFPFTFATKVAGGG 192 Query: 188 SVIAEGTG----NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243 +V +G D S + N + A + I A ++ L L + K Sbjct: 193 TVKLDGKAGPIDAVDVAASPLTASVNVDRLDLAGTG-ITQSAPAISGLVGLDSTLESDGK 251 Query: 244 QPIYSGVFSVAGDFSK-LLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 G + S + + + ++ + +++ ++ Sbjct: 252 IARVKGKVKADNLKLAIHGKPAKRPVEFEFSLDQDLRKRSGQLRQGQIKIGSAVANLSGT 311 Query: 303 NKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKD 362 Q +++ NG + E L+ ++ + Sbjct: 312 ---YADQGASTVIHMVLNGPKMAVTELEALLPALGVVLPNGSSLQGGTASVRLDMDGALE 368 Query: 363 NSHDK 367 + K Sbjct: 369 SLVTK 373 >gi|91775553|ref|YP_545309.1| AsmA [Methylobacillus flagellatus KT] gi|91709540|gb|ABE49468.1| AsmA [Methylobacillus flagellatus KT] Length = 700 Score = 86.1 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 41/348 (11%), Positives = 102/348 (29%), Gaps = 27/348 (7%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPL--FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 RR++ L + L + W+ RE + + + + + + ++ +L Sbjct: 11 RRLIKFGKILLWLFLGVILAFVICEVQGWSFLREPAQSLLSKQLERDVRLDKPFRLRLLS 70 Query: 61 FPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLL----SGEIRVFDMYIDQPHLNF 114 + + I E + + ++ + L GE+R+ ++ +D Sbjct: 71 GIQLDLGHLYISAPEKFNVPHLVDADNIRLKLRYRDLWHYRKQGELRIHEIIVDAIDGQL 130 Query: 115 YLSSKGVSNWFQRKSTMDMIHNV-ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 + G ++W K I+E + V+ G I D S + Sbjct: 131 VRHADGSASWDFPKDESQPASPFPIIETLIVRNGSGHIDDAISATKLKAT---------- 180 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA---KNKAISLKIQLFPLAYPI 230 +++ V +G ++ + P + +K + + + Sbjct: 181 FKTDEGAKQAALRSEVSVDGQFKHRPLKAFLETPGFLPVATHDEDSPPIKSKGWLEYGKL 240 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRI 285 +D G + G V G +L + + RLS + + Sbjct: 241 RVDFDGQAADLFGRLNIEGSAVVTGPSLSVLGELVGSVFPTTDPFRLSASLSKQKDVWEV 300 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 + + + + + +L+ +G+ F Sbjct: 301 NVDSAKIGRSSLAATFQYDPRSKTTGIPILSGHIDGSRFYLADLAPAF 348 >gi|260758541|ref|ZP_05870889.1| AsmA family protein [Brucella abortus bv. 4 str. 292] gi|260762364|ref|ZP_05874707.1| AsmA family protein [Brucella abortus bv. 2 str. 86/8/59] gi|260668859|gb|EEX55799.1| AsmA family protein [Brucella abortus bv. 4 str. 292] gi|260672796|gb|EEX59617.1| AsmA family protein [Brucella abortus bv. 2 str. 86/8/59] Length = 619 Score = 86.1 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 30/310 (9%), Positives = 86/310 (27%), Gaps = 31/310 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80 VP + R ++ + G + ++ ++ + P + + + Sbjct: 2 VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127 + + + L + G I + I +PH+N +S G R Sbjct: 62 MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121 Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + + GR+ + D S+ N+ + ++ + L Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + +G+ + + + F +T + + A P+ + G + Sbjct: 182 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 241 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292 + + G + L+ L+ + ++ + ++ + Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300 Query: 293 ILPNSSTDED 302 + Sbjct: 301 NGSPVKGVIE 310 >gi|92114357|ref|YP_574285.1| hypothetical protein Csal_2235 [Chromohalobacter salexigens DSM 3043] gi|91797447|gb|ABE59586.1| conserved hypothetical protein [Chromohalobacter salexigens DSM 3043] Length = 1290 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 43/339 (12%), Positives = 102/339 (30%), Gaps = 28/339 (8%) Query: 3 RRVLIGLGFLFS-VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R L + + + L+ + FR + E V+ + + Sbjct: 9 RWALTIMAIVLGGIALILLAARGVTTQADAFRGELESLLASRFSANAEVQ-RLGAEWHGW 67 Query: 62 -PSVFFKDIRI-DQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSS 118 P++ + + G+ ++ R + L L G +++ ++ Y Sbjct: 68 DPALNLSGVTLRAATRQGAPLLSLDSAQARLDTLASLRAGYPVFARADVERATVHLYQRE 127 Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 G W + V + + + + Q + D + + + ++ Sbjct: 128 DGGWGWPSAEV----PEQVQSSRFRLADLD-RWVGALLRQRVTIDDARVVLHGQNDSVTL 182 Query: 179 P---LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 L + EG + + + F A + ++ Sbjct: 183 VAPRLLMAGGDSRAHLEGRMHVAGEP---SAALTAVLDVLPGQRGLGAFNAALQVDVNAD 239 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 G L G A + L LE A+ + ++ D +R+S +L++ Sbjct: 240 GLLAL--------GRVLTANERYTLSALEGDARLWARWHDARLEDARLRLSLPRLEATQR 291 Query: 296 NSS----TDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330 + TD + + +D++ + NG + D N+ Sbjct: 292 DGPPLSFTDIGLRAQALRDDDGGWDLWANGLSATRDDND 330 >gi|261315767|ref|ZP_05954964.1| AsmA family protein [Brucella pinnipedialis M163/99/10] gi|261304793|gb|EEY08290.1| AsmA family protein [Brucella pinnipedialis M163/99/10] Length = 619 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 30/310 (9%), Positives = 86/310 (27%), Gaps = 31/310 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80 VP + R ++ + G + ++ ++ + P + + + Sbjct: 2 VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127 + + + L + G I + I +PH+N +S G R Sbjct: 62 MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121 Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + + GR+ + D S+ N+ + ++ + L Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + +G+ + + + F +T + + A P+ + G + Sbjct: 182 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 241 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292 + + G + L+ L+ + ++ + ++ + Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300 Query: 293 ILPNSSTDED 302 + Sbjct: 301 NGSPVKGVIE 310 >gi|301064893|ref|ZP_07205256.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300441015|gb|EFK05417.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 1171 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 111/337 (32%), Gaps = 42/337 (12%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61 + LI + + L G F +P + ++ + + + V+ ++ + P+ Sbjct: 25 KLFLIAVCSVLVYTLAGFFLLPYI-----LKSQLKKYVAEDLNRTLQVE---EVRLNPYA 76 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 ++ + + + DG + + E L D+ +D L ++ Sbjct: 77 LTLNISGLAL-NEADGEGILAFKRFFVSFELKSLFRWAWTFADVSLDGLVLQVDVAPDKS 135 Query: 122 SNW---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQE--SDQVYFLSD 164 N +T + + E+I + G I+I D+ + + Sbjct: 136 VNLDRLVRDLSPERPHAAPPEPATDAPLPRLYFERIQLSNGYIRIRDRSLPTPAEIPIEP 195 Query: 165 LNLQIS--ARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS- 218 +NL+I+ + P I + G + G + D S + A + Sbjct: 196 INLEITHLSTLPEEKGPHKITARLPDDGILEWSGEISLDPIWSEGQFKLKNLHTKLAWNF 255 Query: 219 LKIQLFPLAYPIIIDLFGNLFWN-----EKQPIYSGVFSVAGDFS---KLLNLELSAKKS 270 LK L A I+ L G+ ++ + I + EL+ Sbjct: 256 LKQTLKIDAPEGILGLEGHYLFDYTAKVPQIKISDLTMQLDKLNLKVMNTPKAELAINAI 315 Query: 271 RL-SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 R+ +G F ++ ++ + R L ++ ++ + Sbjct: 316 RVDNGRFDLAKNDLAVGRLTLSGGSLQAAVEKGGRLS 352 >gi|77918246|ref|YP_356061.1| hypothetical protein Pcar_0632 [Pelobacter carbinolicus DSM 2380] gi|77544329|gb|ABA87891.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380] Length = 1197 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 97/349 (27%), Gaps = 42/349 (12%) Query: 2 LRRVLIGLGFLFSV-VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +RR+ + ++ +V +P I R E Q + +G ++ K+ P Sbjct: 16 IRRIALWTAGFIALWAVVAGLILPPII-----RHVAENQLSEKLGSACSLG---KVRFNP 67 Query: 61 F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 F + +R+ + +E +R + + D+ + PHL L Sbjct: 68 FTLRLTADKLRVPLPDG-EECFSLERFEIRVSPAGIYRFAPVLSDLKLTDPHLEMRLRPD 126 Query: 120 G--------------------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159 G + V+L + + GG I D Sbjct: 127 GSLSLADLGQALQKASPDETSQPQTSDTTQKEWNLFGVMLTDLEITGGLIHFRDDIRVTE 186 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 + ++DL + ++ + + A+ Sbjct: 187 HTVADLGFYVPFTSTLKRHRER------AITPYLEAVINGRPLRVDGRLAPFAEQLHTEF 240 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 I+L L + + + G FS FS E + LSG ++ Sbjct: 241 DIRLDNLDL---VRFQPYVQPFTSAILNDGQFSTDLIFSMRQQPETGIRLG-LSGQLTLA 296 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328 V + LP + + D S+ G ++ L Sbjct: 297 GLEVLAPDGEEALRLPRLNVELDGALNTSEGMTLK-KVDVQGLQAHLTL 344 Score = 44.5 bits (103), Expect = 0.031, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 78/277 (28%), Gaps = 29/277 (10%) Query: 70 RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF---- 125 + + + + L ++ + + + +PH+N + GV+N Sbjct: 720 SLSVLDGKQEFAALRSLRIQDLDIQPGRQRYTTGPITLVRPHINLIVGDDGVNNLARLFG 779 Query: 126 ---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 S + + G ++I D + L + Sbjct: 780 QTADNAAGTTTSSPPSQTKKEAQTDVTLGIGGLQISDANLVMRDERYQPAVINRLDKLAV 839 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 ++ G D+ + + N + A L+ QL +DL Sbjct: 840 TVEAVENTPDSLAKISFAGELDDAPIQGEGSINPLRADAATELQAQLK------TLDLTA 893 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 +E+ Y L+ ++S + +L I + + + P+ Sbjct: 894 LSPMSERFIAYPLQ-----KGMFTLDSKISIAQGKLDSTHSIQLDGLELGD---KVEAPD 945 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 + K VS ++ N DL++ F Sbjct: 946 APNLPV-KLGVSLLQDPAGNIHLTLP-VRGDLDDPSF 980 >gi|161525812|ref|YP_001580824.1| hypothetical protein Bmul_2643 [Burkholderia multivorans ATCC 17616] gi|189349467|ref|YP_001945095.1| hypothetical protein BMULJ_00595 [Burkholderia multivorans ATCC 17616] gi|160343241|gb|ABX16327.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] gi|189333489|dbj|BAG42559.1| putative membrane protein [Burkholderia multivorans ATCC 17616] Length = 1399 Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 96/331 (29%), Gaps = 37/331 (11%) Query: 2 LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55 LRRV + V + + +FR ER + + ++++ G + Sbjct: 24 LRRVFKVTLAVAIGTYFVACGTFLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GKLS 82 Query: 56 IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 H P V + I ++ + + ++ LL + + +D+P L Sbjct: 83 PHWSGMQPGVEVTHLTIRGRDG-QVALSVPHATAALSWVSLLRLSPALSSLIVDEPDLVV 141 Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166 ++ G + + + E I ++GG ++ D + D LS + Sbjct: 142 ARAADGSLSIAGVGVASAHGGNDTFGTWLLKQEAIVLRGGTLRWRDAQHDAPELALSGIR 201 Query: 167 LQISARFLNIISPLSIDSIK----GSVIAEGTGN---FDNKRSAFKITANFPAKNKAISL 219 L + + L + G + T N + L Sbjct: 202 LAVLNDGRRHKAALQAPANGTLLLGPLDFRARFTHKALAPIGKPSNWTGNAYLSTGPVDL 261 Query: 220 KIQLFPLAYPI-----IIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270 + + P+ ID ++ + +G + G L L Sbjct: 262 QTLARYVDMPLTIHAGRIDNAIWATFSNGRLRSAGG-DLQGADVALRVRPTQPRLDVPTV 320 Query: 271 RLSGNFKISDGN---VRISRYKLQSILPNSS 298 + + G + ++ + + P Sbjct: 321 GFRWDLALDPGRDYTLHLTHFNAELGQPPLP 351 >gi|124267421|ref|YP_001021425.1| hypothetical protein Mpe_A2234 [Methylibium petroleiphilum PM1] gi|124260196|gb|ABM95190.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 1260 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 34/287 (11%), Positives = 82/287 (28%), Gaps = 22/287 (7%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-P 62 R L+ + + + + E A+ +G +A+ +I + P+ Sbjct: 22 RALLWTAGGVATFALLWTLLIGAWLPGFLKPRIEAAASEALGAPLALD---RIELAPWRL 78 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 +++ E + ++ L L + + + +P + + G Sbjct: 79 EAVIAGLKLGPAE--APWLRVAELRADLSIESLWRLAPVLERVLVREPQIELERQAIGRY 136 Query: 123 NWFQ---------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 N L I ++GGRI I+D+ S + + L + + Sbjct: 137 NITPMLEALAKQPPAPPDAKPARFALNNIRLEGGRIHIVDRVSRSEHHVEGLQIGVP--- 193 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 + V + + A+ + + + L P ++ Sbjct: 194 ---FVSNLPSQVTIDVEPLLDARVNGSHLQVQGKTQPFAEGRRSHVDVSWQQLDVPRWVE 250 Query: 234 -LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 L + G + +A R++G+ +S Sbjct: 251 AFAPLLPQALPIDVLRGQLDLRLAIGFEQRPAPAAPLLRIAGSATLS 297 >gi|254689787|ref|ZP_05153041.1| AsmA [Brucella abortus bv. 6 str. 870] gi|256258040|ref|ZP_05463576.1| AsmA [Brucella abortus bv. 9 str. C68] gi|297248870|ref|ZP_06932588.1| AsmA protein [Brucella abortus bv. 5 str. B3196] gi|297176039|gb|EFH35386.1| AsmA protein [Brucella abortus bv. 5 str. B3196] Length = 645 Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 29/311 (9%), Positives = 85/311 (27%), Gaps = 31/311 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79 VP + R ++ + G + ++ ++ + P + + + Sbjct: 27 VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126 + + + L + G I + I +PH+N +S G Sbjct: 87 LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146 Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 R + + GR+ + D S+ N+ + ++ + L Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240 + + + + + + F +T + + A P+ + G Sbjct: 207 WPRTSSAATLKSSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291 + + + G + L+ L+ + ++ + ++ Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325 Query: 292 SILPNSSTDED 302 + + Sbjct: 326 ANGSPVKGVIE 336 >gi|261214585|ref|ZP_05928866.1| AsmA family protein [Brucella abortus bv. 3 str. Tulya] gi|260916192|gb|EEX83053.1| AsmA family protein [Brucella abortus bv. 3 str. Tulya] Length = 619 Score = 85.3 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 29/310 (9%), Positives = 85/310 (27%), Gaps = 31/310 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80 VP + R ++ + G + ++ ++ + P + + + Sbjct: 2 VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127 + + + L + G I + I +PH+N +S G R Sbjct: 62 MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121 Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + + G + + D S+ N+ + ++ + L Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGHVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + +G+ + + + F +T + + A P+ + G + Sbjct: 182 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 241 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292 + + G + L+ L+ + ++ + ++ + Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300 Query: 293 ILPNSSTDED 302 + Sbjct: 301 NGSPVKGVIE 310 >gi|326335493|ref|ZP_08201680.1| outer membrane protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692259|gb|EGD34211.1| outer membrane protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 903 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 55/380 (14%), Positives = 119/380 (31%), Gaps = 32/380 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI--- 58 ++++L +G +F ++++ ++P +E + V +++ + I Sbjct: 1 MKKILKIVGIIFLILILTIVSIPFLF-KNTIKEKIMEKVNESVNAQVSFT-DFSLSIFKN 58 Query: 59 LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE----IRVFDMYIDQPHL 112 P +V +++ G + + + +L + R+ I + Sbjct: 59 FPNATVELGGLKVINNAPFEGDTLAYVGNFQAKVNLKDILFKKDNEPYRLLGFSIADAVV 118 Query: 113 NFYLSSKGVSNWFQRKSTMDMIHN-------VILEKIHVKGGRIKIIDQESDQVYFLSDL 165 N ++S+G N+ K T + N L++ ++ R D S L L Sbjct: 119 NIRMNSEGKGNFDIVKDTSETPDNEEPNNLSFDLKEYSIENLRFTFKDDTSKMSVVLDSL 178 Query: 166 NLQISARFLNIISPLSIDSI-KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 + F I L ++ K S ++GT N + + +LK Sbjct: 179 YHKGKGNFAEQILDLETTTVTKVSFASDGTAFLRNNVVSLDAILGIDLNQQKYTLK-NNT 237 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 + ++ G + + +Y F F L+L +A + G + + Sbjct: 238 LKLNNLELNFNGFVQLLDDGQLYDLSFKTPKTTFKNFLDLIPTAYTKSIEGVQTTGEFTI 297 Query: 284 R---ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL---NETDFFEEE 337 +Y SI N + D+ N+T+ E+ Sbjct: 298 DGKIAGKYTSTSIPKLDIQMLSNNASFKYPSLPK-----SVRNIDIDIKIGNDTEKMEDT 352 Query: 338 EKKNKNDDLKKDDIQYSVNK 357 D +SV Sbjct: 353 YMNINRFSFTIDQDAFSVKA 372 >gi|299148445|ref|ZP_07041507.1| outer membrane assembly protein [Bacteroides sp. 3_1_23] gi|298513206|gb|EFI37093.1| outer membrane assembly protein [Bacteroides sp. 3_1_23] Length = 838 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 42/381 (11%), Positives = 96/381 (25%), Gaps = 56/381 (14%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------IHILP 60 V+++ F +P F+ K + + K P Sbjct: 2 KIAAITVGVIIILMFLLPF-----AFQGKIADIVKTEGNKMLNAQFDFKNLNISLFRNFP 56 Query: 61 FPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYLS 117 SV +D + + + ++ L + ++I+ L+ + Sbjct: 57 QASVTLEDFWLKGTGEFANDTLVQAGEVTAAVNLFSLFGDSGYDISKIFIEDTRLHAIVL 116 Query: 118 SKGVSNWFQRKST-------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 G +NW K V L++ +K + DQ+ + D Sbjct: 117 PDGRANWDIMKPDTTATAEAPVSEEEASSPFKVKLQRFVIKNMNLIYDDQQGKMYADIRD 176 Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 N + + + L +++ S+ + G + T + A ++ Sbjct: 177 FNAVCAGDLGSDRTTLKLEAETKSLTYKMNGIPFLANANISATMDVDADLANNKYTLKDN 236 Query: 225 PLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 + I + G + + + K + + A + Sbjct: 237 TIRLNAIQAGIDGWVALKDPAIDIDLKLNTNDIGFKEILSLIPA---------------I 281 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343 + + ++ K + D N +M + Sbjct: 282 YATEFSSLKTDGTATLTATAKGILQGDTVPAFNIDMQVKNAMF-------------RYPA 328 Query: 344 DDLKKDDIQYSVNKKEEKDNS 364 D I S N + N Sbjct: 329 LPAGVDQINISANVQNPGGNI 349 >gi|182414891|ref|YP_001819957.1| hypothetical protein Oter_3077 [Opitutus terrae PB90-1] gi|177842105|gb|ACB76357.1| protein of unknown function DUF748 [Opitutus terrae PB90-1] Length = 1041 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 116/350 (33%), Gaps = 46/350 (13%) Query: 13 FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71 +VG F +P I R E++ + +G+++ ++ K+ + P+ SV ++ I Sbjct: 19 VLFTVVGFFVLPPLI-----RPQLEKRLSQELGRRVTIE---KLRLNPYTLSVTLENFAI 70 Query: 72 DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR---- 127 + + + + L + + L L G + D+ +D+ L + G ++ Sbjct: 71 MEPDGVTRFLGWQRLYVNFDALSSLWGSWVLGDIELDRFDARVVLQADGTFSFADLLKRF 130 Query: 128 ------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + + + ++ V + D Q + + L + Sbjct: 131 TPTTPAPTPSEPARPIRIARLKVTETSVNFSDLSRAQPFTTTVGPLTFALTEFKT----- 185 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFK--ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 + E ++ ++ + A +SL+ + P P DL Sbjct: 186 VSQRGAPYRFEA-VTESGEKLSWAGTLQAEPMRSAGELSLEGIVLPKYAPYYADLT---- 240 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN----------VRISRYK 289 + + SG SV G + L K G ++ + + + ++ Sbjct: 241 ---QADLTSGRLSVRGRYELDLTPGQHVMKLH-EGMLQLHEVKVVQRSDRSAVLDLPAFE 296 Query: 290 LQSILPNS-STDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE 338 + + ++ S V + + ++GA ++ + + + Sbjct: 297 ISGVDADALSQKATIAAIVLNGGKVSVRREKSGAINLLAMLQPAAPKGGS 346 >gi|91975484|ref|YP_568143.1| AsmA [Rhodopseudomonas palustris BisB5] gi|91681940|gb|ABE38242.1| AsmA [Rhodopseudomonas palustris BisB5] Length = 649 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 83/302 (27%), Gaps = 21/302 (6%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ESKIE 84 I + + G +IA+ G K+ + P +V D+ + D + I Sbjct: 26 IPSGAVTSAIQSRVERDTGYRIAIAGASKVSLFPGFAVTLNDVTVQNPNDRNPDSRFTIG 85 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI--LEKI 142 + +++G+ V ++ + +P L L +N S+ + +++I Sbjct: 86 NVRAELALGSVIAGKPHVTELTLTKPELRVPLIRD-RNNAPAASSSAGSGKTIDAAIDRI 144 Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG---SVIAEGTGNFDN 199 +K G + + + + +N +I+ I + + G + + Sbjct: 145 TIKDGVVVMANAADRVEDRIDRINAEITIDPERRIHAIGGAQLAGKPAKFEIKAAPPAAD 204 Query: 200 KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG-------------NLFWNEKQPI 246 + + L + ++ + G +P Sbjct: 205 AQPVPVDFKLDAPDLLSWPLAAKAEVRLRGALLQINGLSGTLGDGAFNGWASADLAGKPQ 264 Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 + F +S N + +L + N Sbjct: 265 LKLDLDFQRLDLGNPRKPTAPGAPWSDARFDLSGLNYVDAEIRLSAAELNLGAAHFAPAS 324 Query: 307 VS 308 + Sbjct: 325 ID 326 >gi|217979422|ref|YP_002363569.1| AsmA family protein [Methylocella silvestris BL2] gi|217504798|gb|ACK52207.1| AsmA family protein [Methylocella silvestris BL2] Length = 642 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 50/342 (14%), Positives = 102/342 (29%), Gaps = 34/342 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R +L L L ++ + A VP + R+ Q I G +G +LP P Sbjct: 28 RILLGSLCLLAILLGMTAAAVPWLFSTSALRDGITAQIRQITGLSTLSQGKAVFVVLPQP 87 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL------ 116 + I+ L LL G++ + + + +P + L Sbjct: 88 HISIDAIQFADPSGAL-RIDAAYLKGYLRVSALLRGQLEIASVTLGEPQMVIDLAGRPMR 146 Query: 117 --SSKGV-SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 S+ G +N L + + GR ++ + D + +N+ + R Sbjct: 147 SDSAIGRAANAKSATPQASSADETRLGVLTLVNGRARLTNSFGDSDAIVEAINVTVDWRK 206 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK-AISLKIQLFPLAYPIII 232 L S GT F ++ + PA + + L + + + Sbjct: 207 LG-----------ASANINGTARFRDQGADISAAIEHPADLMRGGASGLLLKIDSPALSL 255 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSK--------LLNLELSAKKSRLSGNFKISDGNVR 284 G+L Q ++G + + + + L + L + + + Sbjct: 256 AAEGSLAS-GPQAQFAGRVTASAPSLRRLVETGGYFIALPAPFENFALEADVNATAPSAS 314 Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 S +LQ + + + L + E Sbjct: 315 FSNLRLQLDGNDYEGAL---AVLQGEGRPTLAGTLAANELSL 353 >gi|226525312|gb|ACO70911.1| hypothetical protein [uncultured Verrucomicrobia bacterium] Length = 516 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 50/385 (12%), Positives = 121/385 (31%), Gaps = 66/385 (17%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 + +LI G + ++V+ F V L+I + + + + + + + + P+ Sbjct: 6 KAILIVFGTVLALVVAIVFGVNLYIQSPAVQARIQEEISRSLRLPLKIT---NTSVTPWS 62 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + I I S + + R LP+ SG++ +++M +D P L + + G Sbjct: 63 DLRITGITI--PNGDSNLLEAASFNARYRLLPVFSGKLIIYNMSVDSPKLVWPQNEDGKW 120 Query: 123 NWF--------------------------------QRKSTMDMIHNVILEKIHVKGGRIK 150 + K VI+E +K G ++ Sbjct: 121 ELPKPGQAVAKSAVVATATPEAAPPVIAPVEPKSQEPKPKKKSGFQVIVEGFEIKHGNVE 180 Query: 151 IIDQESDQVYFLSDLNLQISARFL---------------------NIISPLSIDSIKGSV 189 ++D +V +D+++ + N+ P + + + Sbjct: 181 LLDYAQHKVASFTDVHMLYTTLTPERIEGVAEISRIVWSEIFTFENVRFPFNYTADVVDL 240 Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 + T F + A + + + + + + +G Sbjct: 241 -PQITATFGGGPVSSSFNLQSSAPKSPFTFAAKFDAVDVA-RVAKEASWGEGHASGVLAG 298 Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 G+F + L E +A + +G F+ +S +++ D + K S Sbjct: 299 SVDFHGNFPRFLRAEGTAHLTLANGRFQ------ELSYFEMIGNALQIKQLSDLRLKASS 352 Query: 310 DEENLLNFSENGAESMHDLNETDFF 334 + + + N + D ++ Sbjct: 353 ADARIADEKINFDSLILDASDLQLT 377 >gi|298369438|ref|ZP_06980756.1| AsmA family protein [Neisseria sp. oral taxon 014 str. F0314] gi|298283441|gb|EFI24928.1| AsmA family protein [Neisseria sp. oral taxon 014 str. F0314] Length = 705 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 32/321 (9%), Positives = 84/321 (26%), Gaps = 19/321 (5%) Query: 6 LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65 L + + + + R E G+ I + +LP P++ Sbjct: 17 FCILAAILATI-GLNVLLHHVFSTDQVRRHTEAFIRK-TGRTINFDRSVGRSLLPRPTLT 74 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 K++ I + I + + L S + + + G + Sbjct: 75 LKNVVISTPDGNHPAILIRETKIGFAWSALWSDNAPIEKWVVSGADTTLEQTPDG----W 130 Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII-SPLSIDS 184 + ++ ++ RI + + LN Q ++ Sbjct: 131 NLQDLWQQPAGSTPNRLIIESSRIDVRLPQGSYKIENFGLNTQRPEAGGRPFKINGTLQH 190 Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 + +G G + T+ + + L+ + + + L W + Sbjct: 191 DTLPLRWQGNGIWR--------TSGGNWETPSFHLEAAGRLNDHTLTVSTDSALLWQPQS 242 Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 S NL L+A+ ++ + + ++ + S D Sbjct: 243 STLQARNFNLRADSSFHNLHLTAQSPLIT--LRNNHLSLNALSSAFTAGTSESRW--DGS 298 Query: 305 TKVSQDEENLLNFSENGAESM 325 ++ + + + Sbjct: 299 LELDKVSLRPSIAVLDNFKFN 319 >gi|16264304|ref|NP_437096.1| hypothetical protein SM_b20816 [Sinorhizobium meliloti 1021] gi|15140441|emb|CAC48956.1| hypothetical protein SM_b20816 [Sinorhizobium meliloti 1021] Length = 429 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 113/344 (32%), Gaps = 22/344 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR ++ L + ++ + +P I R + RQ + G IA G + + P+ Sbjct: 1 MRRFILSLLGVAALAVAAIAVLPSLISSDWVRAELGRQLSAATGSSIAFNGPVNLSAFPY 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF-YLSSKG 120 +V +D+ + + +G ++ +S L S + + + +D+P + ++ Sbjct: 61 LAVVAEDVTLSAEAEGIT-AEFAEVSGSVALSSLWSDRLHIKQIALDRPVIVLEEKAADE 119 Query: 121 VSNWFQRKSTMDMIHNV----------ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 ++ R + +E + + G I D +SD+ L +S Sbjct: 120 AASTADRGIETGSGDPLPALVAFLERSAIESVSITSGTF-IRRSAEDPEEVVSDVELTLS 178 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 A ++ LS + G E + + + + ++L + P P Sbjct: 179 APDVDDAFSLSASARVGERSYETSFTIS------TLRSLLERQPADVTLTAEADPAPAPG 232 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 + + + +G + + G + S + G ++ R L Sbjct: 233 LTNFEASGQVTLNA---NGSYQIRGGEVEAGEQAFSLNALFVPGERARFLVDLEADRLDL 289 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334 + + + + + G ++ +N Sbjct: 290 TPFMDVAPETSQTEAPAADTAKPANLQFLAGFDADMSINAAALT 333 >gi|237721209|ref|ZP_04551690.1| outer membrane assembly protein [Bacteroides sp. 2_2_4] gi|229449005|gb|EEO54796.1| outer membrane assembly protein [Bacteroides sp. 2_2_4] Length = 838 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 42/381 (11%), Positives = 96/381 (25%), Gaps = 56/381 (14%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------IHILP 60 V+++ F +P F+ K + + K P Sbjct: 2 KIAAITVGVIIILMFLLPF-----AFQGKIADIVKTEGNKMLNAQFDFKNLNISLFRNFP 56 Query: 61 FPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYLS 117 SV +D + + + ++ L + ++I+ L+ + Sbjct: 57 QASVTLEDFWLKGTGEFANDTLVQAGEVTAAVNLFSLFGDSGYDISKIFIEDTRLHAIVL 116 Query: 118 SKGVSNWFQRKST-------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 G +NW K V L++ +K + DQ+ + D Sbjct: 117 PDGRANWDIMKPDTTATAEAPVSEEEASSPFKVKLQRFVIKNMNLIYDDQQGKMYADIRD 176 Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 N + + + L +++ S+ + G + T + A ++ Sbjct: 177 FNAVCAGDLGSDRTTLKLEAETKSLTYKMNGIPFLANANISATMDVDADLANNKYTLKDN 236 Query: 225 PLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 + I + G + + + K + + A + Sbjct: 237 TIRLNAIQAGIDGWVALKDPAINIDLKLNTNDIGFKEILSLIPA---------------I 281 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343 + + ++ K + D N +M + Sbjct: 282 YATEFSSLKTDGTATLTATAKGILQGDTVPAFNIDMQVKNAMF-------------RYPA 328 Query: 344 DDLKKDDIQYSVNKKEEKDNS 364 D I S N + N Sbjct: 329 LPAGVDQINISANVQNPGGNI 349 >gi|218886450|ref|YP_002435771.1| hypothetical protein DvMF_1354 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757404|gb|ACL08303.1| protein of unknown function DUF748 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 1428 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 38/381 (9%), Positives = 97/381 (25%), Gaps = 43/381 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R + + ++ +P R E Q + + + V+ K+ P+ Sbjct: 32 RWTYTVAAIVAAWGVLAGLAMPPL-----LRGVLEDQLSDKLRVRCTVE---KVRFNPYS 83 Query: 63 -SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 ++ + +R+ + L L + + + P + G Sbjct: 84 WALSIQGVRVPNPTGDGDMLTFDALEFSPGLSAALRLAPVLAYVRLVNPVVYVAHFGDGR 143 Query: 122 SNWFQ------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 ++ + + + V G + D ++ ++ Sbjct: 144 YSFSEFIPADGEGEGGKQDRADRSEGANKPLFPFAASNFEVVNGTVIFHDAPQKTIHTIT 203 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 +L+ + I + D + + A++ + Sbjct: 204 ELHFVVPFTSTMERDRERI------ITPSLNATVDGRALNVQGRLLPFAEHLRTEFDVVT 257 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 + L + SG V + + L+G+ ++D V Sbjct: 258 DEVDLTQY---REYLAAFTPLRVESGRLGV-NLKLVVEQPAAHDVEFGLAGSVTLNDLRV 313 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEE 337 K + S E + + ++ + +G + ++ F Sbjct: 314 NAPDGKEAVLGLTSGVVEVEEFSLLDRHVDVRRVALDGLLARVGRLADGSIDWVGFVAPA 373 Query: 338 EKKNKNDDLKKDDIQYSVNKK 358 K + D K D K Sbjct: 374 GGKRQEPDQSKQDQSKQAQAK 394 Score = 47.2 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 34/328 (10%), Positives = 83/328 (25%), Gaps = 18/328 (5%) Query: 27 IDWTDFREDFERQ--ATLIVGK-----KIAVKGGI--KIHILPFPSVFFKDIRIDQKEDG 77 +D T +RE + G+ K+ V+ + SV D+R++ + Sbjct: 260 VDLTQYREYLAAFTPLRVESGRLGVNLKLVVEQPAAHDVEFGLAGSVTLNDLRVNAPDGK 319 Query: 78 SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV 137 + + E LL + V + +D + G +W + Sbjct: 320 EAVLGLTSGVVEVEEFSLLDRHVDVRRVALDGLLARVGRLADGSIDWVGFVAPAGGKRQE 379 Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197 + + + + + Q+ + + + A G Sbjct: 380 PDQSKQDQSKQAQAKQDRAGQIDGARNDRQTGPRNGTMAATAAVASNGANGTGAGGATGK 439 Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257 + A+ + ++ L ++ + SG+ + DF Sbjct: 440 NPASPPASGKT--AAEQLPFVVNVRTLGLRDATVVWKDATVP-GGAVVRLSGLDATLTDF 496 Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317 + + + + ++ G K + K + + E L Sbjct: 497 ATPGGKQQPKGGGAFTASLRMDGGGAAGEAAKPGPGGKPGAGAGTLKAEGTLTLEPL--- 553 Query: 318 SENGAESMHDLNETDFFEEEEKKNKNDD 345 G D + + Sbjct: 554 ---GVTLRLDARDLPLLPVRGYVAQAAP 578 >gi|33600317|ref|NP_887877.1| hypothetical protein BB1331 [Bordetella bronchiseptica RB50] gi|33567916|emb|CAE31829.1| putative exported protein [Bordetella bronchiseptica RB50] Length = 1149 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 31/234 (13%), Positives = 79/234 (33%), Gaps = 21/234 (8%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 R + + ++G+ ++V KI PF ++ D+ + Q E + ++ L + A Sbjct: 40 VRGALTQDVSAMLGRDVSVG---KIRFNPFTLTLRAHDLALAQPEGAAPLLQVAELDVSA 96 Query: 91 EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM--------------IHN 136 ++ L V + + QP + N+ + + Sbjct: 97 SWMSLFWFAPVVDSLVVRQPRIALVREDVTRFNFSDIQQKVADMTAQSPPEPEPEAGPPR 156 Query: 137 VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT-G 195 L + ++GG I + D+ S + + ++ L + + + + G+ Sbjct: 157 FSLNNMVLEGGEITLDDKVSGRQQRIDEIALGVPFISTFGYATDIDVQPRVHMRINGSPF 216 Query: 196 NFDNKRSAFK--ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 + F ++ + L+ P+ + L L ++ Q ++ Sbjct: 217 DLTGVARPFDTVPSSTLDVSFAGLELEKWADAWPLPLPVKLERALLDSDLQVLF 270 >gi|297538915|ref|YP_003674684.1| AsmA family protein [Methylotenera sp. 301] gi|297258262|gb|ADI30107.1| AsmA family protein [Methylotenera sp. 301] Length = 675 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 34/319 (10%), Positives = 95/319 (29%), Gaps = 23/319 (7%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68 + + LV I W R +R + + + + K+ ++ + Sbjct: 14 IFGAIVLALVLVVAFCEAIGWPFLRSPLQRFMQNKLERTVNIDAPFKLKLIGGLKLNAGG 73 Query: 69 IRIDQKEDG--SFESKIEGLSMRA---EFLPLLSGEI-RVFDMYIDQPHLNFYLSSKGVS 122 RI + + + +GL ++ + + +G + + + +F G S Sbjct: 74 FRISAPPEFKVPYLASAKGLELQLRYSDLWGIETGSPYVIKSIKAEHIDAHFSRGLDGKS 133 Query: 123 NWFQRKSTMDMIHNVI-LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 W K+ D I ++ + ++ G+ +D + + + + + + +S ++ Sbjct: 134 TWQFNKNDTDPIRPFPLIQSLLIREGQ-AYVDDRLTKADLIIEFSTDEGQKNTSPVSKVA 192 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + +G + + + + + G ++ Sbjct: 193 VRGDFRERKLKGELTTQGFLPIAS------QDKNSAPVSSKGWLEYGKVYASFDGTVYDL 246 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYKLQSILPN 296 + G ++ G L LS R +SG + + I + + Sbjct: 247 FGEQNIKGQLAINGSSLGELGDLLSITLPRTTPFKISGGIERNHEVWLIDVASARIGQSD 306 Query: 297 SSTDEDNKTKVSQDEENLL 315 K + + + Sbjct: 307 ----LSGKFEYDTRPDKSV 321 >gi|240136982|ref|YP_002961451.1| hypothetical protein MexAM1_META1p0212 [Methylobacterium extorquens AM1] gi|240006948|gb|ACS38174.1| conserved hypothetical protein; putative exported protein [Methylobacterium extorquens AM1] Length = 1175 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 111/322 (34%), Gaps = 31/322 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R L L +VLV A VP FIDW+ R +R + +G +G I + +LP Sbjct: 1 MRDSLTALAGAVVLVLVAALAVPPFIDWSAHRALIDRTLSDSLGAGARSEGAIDLRLLPS 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P + +R+ ++ + + PLL GE+R +++ L +S + + Sbjct: 61 PHLRLARLRLGAEDG--PALDAQAVDAEIALAPLLKGEVRFVQTSVERAGLTLPVSDEAL 118 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + ++ ++++ + ++ + I+ + NL++ A Sbjct: 119 LLPREPQTLRRD---IVIDDLRIRRLTVAILRTGEAPQEQFAAENLRLRAP--------- 166 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 ++ G +AEGT F + + + ++SLK+ P ++L + Sbjct: 167 --ALAGPWLAEGTAKGS----PFHLATSVAGSDGSLSLKLTGGGDTMP-RLELDARITLK 219 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS----------RLSGNFKISDGNVRISRYKLQ 291 + + L+ L+ F V+ +L+ Sbjct: 220 PEDASDADRVRRGLVPEAEGTARLTVGPPVQPAGAVLPLTLAAKFASRGPLVQAKTVELE 279 Query: 292 SILPNSSTDEDNKTKVSQDEEN 313 + ++ E Sbjct: 280 LDPGGKAARLSGNGRLDLREAR 301 >gi|83312203|ref|YP_422467.1| hypothetical protein amb3104 [Magnetospirillum magneticum AMB-1] gi|82947044|dbj|BAE51908.1| Uncharacterized protein involved in outer membrane biogenesis [Magnetospirillum magneticum AMB-1] Length = 673 Score = 84.6 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 31/266 (11%), Positives = 75/266 (28%), Gaps = 19/266 (7%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED-GSFESKIEGLSM 88 + + G ++ G K+ + P P + F + + G I+ + Sbjct: 31 EAYNRFLAERVKAATGLDLSFAGVTKLKLGPSPVLSFTGVTLSAAGGKGGPLLYIDRIEA 90 Query: 89 RAEFLPLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQRKSTMDMIH--NVILEKIHVK 145 R +PL ++R+ + + +P L+ + G + L ++ ++ Sbjct: 91 RVALVPLALRQLRLDSITLIRPVLDLRQLGALGPTRPLDLTEAPAGAPITRPALSELRIE 150 Query: 146 GGRIKIID---------------QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 ++ D L + +I PLS + Sbjct: 151 DASVRWTDGHLQVAKASFHPETEAGGPLSLQLDGIWQNTPVSLSGVIGPLSSLAGGKPYP 210 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250 + G+ + + P K + L+++ ++ L + + Sbjct: 211 VQFKGSVGGANLTLRGSLAAPLAGKGLDLELRAQGEEMSDLLRLGPTTATPQALGPFKLA 270 Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNF 276 V + +L A R Sbjct: 271 TRVTDAAGSVALSDLDAVIGRRDAQL 296 >gi|213963631|ref|ZP_03391883.1| AsmA family protein [Capnocytophaga sputigena Capno] gi|213953759|gb|EEB65089.1| AsmA family protein [Capnocytophaga sputigena Capno] Length = 943 Score = 84.6 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 98/333 (29%), Gaps = 28/333 (8%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL---P 60 + L LG L ++L P+ E ++ A + ++ + P Sbjct: 7 KALKYLGILVGLLLAFVIVFPMLY-PEYVTEKVKKLANDNLNGELNFS-KANLTFFTHFP 64 Query: 61 FPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLS 117 ++ D+ + ++ LS+ + LL S +I + ++Y+ ++ + Sbjct: 65 SLTLNLDDVLLKGSAPFENDTLVSVKRLSLGIDVKELLFSKKIDIEEIYLKNAFVHIQVD 124 Query: 118 SKGVSNW------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 +G +++ + D V L++I +K R+ D+ + + N Sbjct: 125 KQGGASYNVYKSSEETTDEGDDDARVDLQRIELKDTRLIYDDKSTGIYIQANGFNYLGKG 184 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI-QLFPLAYPI 230 I L + S+ G K ++S Q + Sbjct: 185 GLEESIFDLRTKAQIQSLDFIFGGETYLKDKHVNAELITQINTHSLSFIFQQNDLKINQL 244 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 +D G L + Y F + S L + + F + Sbjct: 245 PVDFKGKLDFLSNG--YDLNFEINSKDSNLNDFFTALPP-----QFTQWHKKATL----- 292 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 + K SQ+ + F + Sbjct: 293 -KGKTDIFFSMKGKYIASQNLSPDIYFKMKVRD 324 >gi|134294814|ref|YP_001118549.1| hypothetical protein Bcep1808_0702 [Burkholderia vietnamiensis G4] gi|134137971|gb|ABO53714.1| conserved hypothetical protein [Burkholderia vietnamiensis G4] Length = 1403 Score = 84.6 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 105/331 (31%), Gaps = 37/331 (11%) Query: 2 LRRVL---IGLGFLFSVVLVGAFTVPLFI---DWTDFREDFERQATLIVGKKIAVKGGIK 55 LRRV + +G V GAF ++ +FR ER + + ++++ G + Sbjct: 24 LRRVFRVTLAVGIGVYFVASGAFLGLRYVVLPRIDEFRPRIERAVSDKLHAQLSI-GRLS 82 Query: 56 IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 H P V ++ I ++ + + ++ LL + + +D P L Sbjct: 83 PHWSGMQPGVEVTNLTIRGRDGRI-ALSVPHATAALSWISLLRLSPALSSLIVDHPDLVV 141 Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166 ++ G + + + E I ++ G ++ D + D LS + Sbjct: 142 ARAADGSLSVAGIGVATTHGGNDTFGTWLLKQEAIVLRNGTLRWRDAQHDAPELALSGIR 201 Query: 167 L----QISARFLNIISPLSIDSIKGSVIAEGTGNFD-----NKRSAFKITA---NFPAKN 214 L + + +P + + G + K + + A P Sbjct: 202 LAVLNHGREHKVALQAPANGTLLLGPLDFRARFTHKPLAPIGKPTNWTGNAYLSTGPVDL 261 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270 + + + L A+ ID + + +G + G L L Sbjct: 262 QTLGRYLDLPFTAHAGRIDNAIWATFQDGHLRSAGG-DLQGADVVLRVRPTQPRLEVPTV 320 Query: 271 RLSGNFKISDGN---VRISRYKLQSILPNSS 298 + + G + ++R+ + P Sbjct: 321 GFGWDIALDAGRDYTLHLTRFNAELGQPPLP 351 >gi|329914122|ref|ZP_08276056.1| exported protein [Oxalobacteraceae bacterium IMCC9480] gi|327545205|gb|EGF30475.1| exported protein [Oxalobacteraceae bacterium IMCC9480] Length = 1391 Score = 84.6 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 29/260 (11%), Positives = 87/260 (33%), Gaps = 12/260 (4%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGL 86 + ++ + E+ A+ +G+ +++ G I +P + D+ I + + + Sbjct: 70 NIDQYKPEVEQLASRALGQPVSI-GSIGATWRGLYPDLTLADVVIHDRRG-EAALTLPKV 127 Query: 87 SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-------QRKSTMDMIHNVIL 139 + L ++R+ + +DQP ++ +G + + + Sbjct: 128 EATLSWWSLAVADLRLRRLALDQPDIDIVRDPQGRFLVAGIAIDSGKPGDSAAADWILAQ 187 Query: 140 EKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSIKG-SVIAEGTGNF 197 +I ++ G+I IDQ+ L ++ + + N + + F Sbjct: 188 NEIVIRAGQIHWIDQQRGAPELILQQVDFTLRNSWRNHQVAFKAVPPATLAAPLDVRATF 247 Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257 + ++ + + + A+ +D ++ A Sbjct: 248 SHPHFGNAVSDARQWLGELYADLREADLAAWKTWLDFPVDVQSARGAVRAWLSIDRARIV 307 Query: 258 SKLLNLELSAKKSRLSGNFK 277 + +L+++ +RL + + Sbjct: 308 NLTADLDVAGISTRLRPDLQ 327 >gi|316936150|ref|YP_004111132.1| AsmA family protein [Rhodopseudomonas palustris DX-1] gi|315603864|gb|ADU46399.1| AsmA family protein [Rhodopseudomonas palustris DX-1] Length = 606 Score = 84.6 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 29/305 (9%), Positives = 76/305 (24%), Gaps = 22/305 (7%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIE 84 I + + G ++ + G + + P ++ D+ + + G KI Sbjct: 26 IPAGALTAAIQSRIERDTGYRVTIAGTGTVRLFPAVALTLHDVTAESPDGGPADPRLKIA 85 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIH 143 + L+S R+ ++ + P L+ L +G + + +E+I Sbjct: 86 TVRAELPLTSLVSATPRITELTLISPELHLPLLRRRGDAVATPASARKADAGLAEIERIV 145 Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG-----NFD 198 ++ G + + + + + S + G + + Sbjct: 146 IQDGAVVMTSAADRIERRIGGIQADVERDDARGPITASGSAALGRSPLSFELTATPPSDE 205 Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG-------------NLFWNEKQP 245 + +T + P L+ + + + G +P Sbjct: 206 RQPILVDVTLDAPGL-LTSRLRARAEARLRDATLSINGISGKLGDAPFNGWAAVDVAGKP 264 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 + + A N + +L + N Sbjct: 265 RVKLDLDFRRLDLVAITRSVPAGAPWSEAPLDFVGLNYVDAEIRLSAAELNIGPARIAPA 324 Query: 306 KVSQD 310 Sbjct: 325 SADAG 329 >gi|221202236|ref|ZP_03575270.1| conserved hypothetical protein TIGR02099 [Burkholderia multivorans CGD2M] gi|221209175|ref|ZP_03582168.1| conserved hypothetical protein TIGR02099 [Burkholderia multivorans CGD2] gi|221170993|gb|EEE03447.1| conserved hypothetical protein TIGR02099 [Burkholderia multivorans CGD2] gi|221177810|gb|EEE10223.1| conserved hypothetical protein TIGR02099 [Burkholderia multivorans CGD2M] Length = 1399 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 96/331 (29%), Gaps = 37/331 (11%) Query: 2 LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55 LRRV + V + + +FR ER + + ++++ G + Sbjct: 24 LRRVFKVTLAVAIGTYFVACGTFLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GKLS 82 Query: 56 IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 H P V + I ++ + + ++ LL + + +D+P L Sbjct: 83 PHWSGMQPGVEVTRLTIRGRDG-QVALSVPHATAALSWMSLLRLSPALSSLIVDEPDLVV 141 Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166 ++ G + + + E I ++GG ++ D + D LS + Sbjct: 142 ARAADGSLSIAGVGVASAHGGNDTFGTWLLKQEAIVLRGGTLRWRDAQHDAPELALSGIR 201 Query: 167 LQISARFLNIISPLSIDSIK----GSVIAEGTGN---FDNKRSAFKITANFPAKNKAISL 219 L + + L + G + T N + L Sbjct: 202 LAVLNDGRLHKAALQAPANGTLLLGPLDFRARFTHKALAPIGKPSNWTGNAYLSTGPVDL 261 Query: 220 KIQLFPLAYPI-----IIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270 + + P+ ID ++ + +G + G L L Sbjct: 262 QTLARYVDMPLTIHAGRIDNAIWATFSNGRLRSAGG-DLQGADVALRVRPTQPRLDVPTV 320 Query: 271 RLSGNFKISDGN---VRISRYKLQSILPNSS 298 + + G + ++ + + P Sbjct: 321 GFRWDLALDPGRDYTLHLTHFNAELGQPPLP 351 >gi|33866022|ref|NP_897581.1| hypothetical protein SYNW1488 [Synechococcus sp. WH 8102] gi|33638997|emb|CAE08003.1| conserved hypothetical protein [Synechococcus sp. WH 8102] Length = 1470 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 91/323 (28%), Gaps = 16/323 (4%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTD-----FREDFERQATLIVGKKIAVKGGIKIHILPF 61 + L +V + V D FR ER +G I + Sbjct: 11 LILISSAAVGVGSVLAVQTLDRTADEVLASFRGPLERSIGTALGHPITFGPYKGLRPW-- 68 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 V + I K++GLS+ + L L V + + + G Sbjct: 69 -GVALGETTIAPTRTDRSTIKVQGLSVHLDPLASLRQWQPVLRLKLQGLDVALDRQPDGR 127 Query: 122 SN-WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + + + ++ L + RI++ D++ S ++QI+ + + IS L Sbjct: 128 YWRFGEVSQDGEAPPDLDLRFELAQPARIRLT-PSGDEIQLTSRGSVQIARQRFSAISRL 186 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 S GS+ E G +D + ++ + W Sbjct: 187 SRLGRAGSLDLEAKGRWDRPELVLSSRLRSLDLSTLEAVLPGSDATGLAGQAGGDLAIQW 246 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 + + G V L + S + V + R + + Sbjct: 247 TPSRFLCQGQLKVKDLELHNTTLPDPLRSSAV--GVSCRGDRVSLIRSRFRMG----DWR 300 Query: 301 EDNKTKVSQDEENLLNFSENGAE 323 D + V D L + + Sbjct: 301 ADARGSVQLDGAVDLRINVASLK 323 >gi|33593676|ref|NP_881320.1| hypothetical protein BP2712 [Bordetella pertussis Tohama I] gi|33563749|emb|CAE42989.1| putative exported protein [Bordetella pertussis Tohama I] gi|332383080|gb|AEE67927.1| hypothetical protein BPTD_2670 [Bordetella pertussis CS] Length = 1153 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 31/234 (13%), Positives = 79/234 (33%), Gaps = 21/234 (8%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 R + + ++G+ ++V KI PF ++ D+ + Q E + ++ L + A Sbjct: 40 VRGALTQDVSAMLGRDVSVG---KIRFNPFTLTLRAHDLALAQPEGAAPLLQVAELDVSA 96 Query: 91 EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM--------------IHN 136 ++ L V + + QP + N+ + + Sbjct: 97 SWMSLFWFAPVVDSLVVRQPKVALVREDVTRFNFSDIQKKVADMAAQSPPEPEPESGPPR 156 Query: 137 VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT-G 195 L + ++GG I + D+ S + + ++ L + + + + G+ Sbjct: 157 FSLNNMVLEGGEITLDDKVSGRQQRIDEIALGVPFISTFGYATDIDVQPRVHMRINGSPF 216 Query: 196 NFDNKRSAFK--ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 + F ++ + L+ P+ + L L ++ Q ++ Sbjct: 217 DLTGVARPFDTVPSSTLDVSFAGLELEKWADAWPLPLPVKLERALLDSDLQVLF 270 >gi|33595790|ref|NP_883433.1| hypothetical protein BPP1115 [Bordetella parapertussis 12822] gi|33565869|emb|CAE36416.1| putative exported protein [Bordetella parapertussis] Length = 1147 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 31/234 (13%), Positives = 80/234 (34%), Gaps = 21/234 (8%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 R + + ++G+ ++V KI PF ++ D+ + Q E + ++ L + A Sbjct: 40 VRGALTQDVSAMLGRDVSVG---KIRFNPFTLTLRAHDLALAQPEGAAPLLQVAELDVSA 96 Query: 91 EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM--------------IHN 136 ++ L V + + QP + N+ + + Sbjct: 97 SWMSLFWFAPVVDSLVVRQPRIALVREDVTRFNFSDIQQKVADMAAQSPPEPEPEAGPPR 156 Query: 137 VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT-G 195 L + ++GG I + D+ S + + ++ L + + + + G+ Sbjct: 157 FSLNNMVLEGGEITLDDKVSGRQQRIDEIALGVPFISTFGYATDIDVQPRVHMRINGSPF 216 Query: 196 NFDNKRSAFK--ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 + +F ++ + L+ P+ + L L ++ Q ++ Sbjct: 217 DLTGVARSFDTVPSSTLDVSFAGLELEKWADAWPLPLPVKLERALLDSDLQVLF 270 >gi|325107364|ref|YP_004268432.1| hypothetical protein Plabr_0786 [Planctomyces brasiliensis DSM 5305] gi|324967632|gb|ADY58410.1| hypothetical protein Plabr_0786 [Planctomyces brasiliensis DSM 5305] Length = 854 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 41/348 (11%), Positives = 97/348 (27%), Gaps = 48/348 (13%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66 LF L +P + R+ + + G + P+ Sbjct: 78 WVFAGLFIAFLGVLAVLPQLLSTAAMRQQIASSLMQDFDGTVEIGG-ADLAWW-KPA-EL 134 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126 ++ + + + I+ + + ++ +++P + + + G +NW + Sbjct: 135 SEMTMTDGQG-ETMATIQSAKVSTPLWRMFWPGSVPVELKVERPRIVYEIDRYGRTNWAK 193 Query: 127 ----RKSTMDMIHNVILE------KIHVKGGRIKIIDQESDQVYFLSDLNLQISAR---- 172 ++ + I V G++ + D+ S + +L+ + Sbjct: 194 VFGGLEAGQKSFRWPEFQHSGQPVHIRVSDGQVIVKDRVSGRTIEARNLDALLKKSPRFV 253 Query: 173 ------FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF----------KITANFPAKNKA 216 + S G++ A+ + A + P +A Sbjct: 254 EGELTGQTRLTSEEEGSRPAGNISADFQLAMAGNKVAGGDVSGEISKTPLELIQPWLKQA 313 Query: 217 IS-LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 + L + GNL + G S ++ + L+G Sbjct: 314 MPHLHLSAGNADGKFESKWTGNLR-TGLKLAVEGTLSADDVSAQSTKWNQQLTGTALTGK 372 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 F I + LPNS D + + + E + E + Sbjct: 373 FSIDNT------------LPNSPGKFDIRWTLDEAELSDYRIEEEPQD 408 >gi|260755318|ref|ZP_05867666.1| AsmA family protein [Brucella abortus bv. 6 str. 870] gi|260884336|ref|ZP_05895950.1| AsmA family protein [Brucella abortus bv. 9 str. C68] gi|260675426|gb|EEX62247.1| AsmA family protein [Brucella abortus bv. 6 str. 870] gi|260873864|gb|EEX80933.1| AsmA family protein [Brucella abortus bv. 9 str. C68] Length = 619 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 29/310 (9%), Positives = 85/310 (27%), Gaps = 31/310 (10%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80 VP + R ++ + G + ++ ++ + P + + + Sbjct: 2 VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127 + + + L + G I + I +PH+N +S G R Sbjct: 62 MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121 Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + + GR+ + D S+ N+ + ++ + L Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + + + + + + F +T + + A P+ + G + Sbjct: 182 PRTSSAATLKSSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 241 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292 + + G + L+ L+ + ++ + ++ + Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300 Query: 293 ILPNSSTDED 302 + Sbjct: 301 NGSPVKGVIE 310 >gi|149927492|ref|ZP_01915746.1| hypothetical protein LMED105_11915 [Limnobacter sp. MED105] gi|149823765|gb|EDM82991.1| hypothetical protein LMED105_11915 [Limnobacter sp. MED105] Length = 764 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 43/354 (12%), Positives = 109/354 (30%), Gaps = 25/354 (7%) Query: 2 LRRVLIGLGFLFS----VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 +++ ++ + V+ A + ID + +A G +++ Sbjct: 1 MKKAIVWGMGIVVGVPLVLAATAAILVNTIDQQALLNKASAIVKEKQQRDLAFTGPVQLK 60 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 P + + + + K + +S+ LPLLS E+ V + +N + Sbjct: 61 WFPSIGADLNGVTLSEFQSTDQFLKADKVSISLALLPLLSSEVVVDAIQASGVTVNVAKN 120 Query: 118 SKGVSNWF----------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 + G N+ T + N ++ I ++ + ID+++ Sbjct: 121 ADGKFNFDDLSKSDNQDEVQSESEPSPDTGEQALNFSVDSIALENLNVAYIDKQTGSEAS 180 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK 220 L++ +Q + + + + + + N D N R F + N A + + Sbjct: 181 LNNFAMQSGRIEPGVPTDIELKGNVKANKPQADLNIDLNTRLEFGLGENLYANFENLKFA 240 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL-SGNFKIS 279 + +++ + N +K + A L S + ++S Sbjct: 241 VLGQLDQQQADVNVQAS-TLNVNPNTLEIKAQSLDAKAKGQLPNVGAFDVSLISPSLELS 299 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 + R ++ L ++ + + A +N + Sbjct: 300 ETVARGEALNFKADLKQATRSIN--ATLDLAGLQGNLKQAVSAALKTTVNLVEG 351 >gi|307322552|ref|ZP_07601896.1| AsmA family protein [Sinorhizobium meliloti AK83] gi|306891796|gb|EFN22638.1| AsmA family protein [Sinorhizobium meliloti AK83] Length = 1004 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 103/297 (34%), Gaps = 20/297 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR ++ L + ++ + +P I R + RQ + G IA G + + P+ Sbjct: 1 MRRFILSLLGVAALAVAAIAILPSLISSDWVRSELGRQLSAATGSSIAFNGPVNLSAFPY 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG- 120 +V +D+ + + +G ++ +S L S + + + +D+P + + Sbjct: 61 LAVVAEDVTLSAEAEGIT-AEFAEVSGSVALSSLWSDRLHIKQIALDRPVIVLEEKAADE 119 Query: 121 -----------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 + + + + +E + + G + +++ +S++ L + Sbjct: 120 AAPTTAGSGHETGSGDPLPALVAFLERSAIESVSIASGTFILR-SATNRDEVVSNIALTL 178 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 SA ++ LS + G E + + + ++++ P Sbjct: 179 SAPDIDDEFSLSASARMGERNYETSFTIS----TLRSLLERQPADVTVTVEADPAPAPGL 234 Query: 230 IIIDLFGNLFWNEKQ--PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + G + N I G L L + +++R + + ++ Sbjct: 235 TNFEASGQVTLNANGSYQIRGGQVEAGEQVFGLNALFVPGERARFLVDLEADRLDLT 291 >gi|27375469|ref|NP_766998.1| hypothetical protein blr0358 [Bradyrhizobium japonicum USDA 110] gi|27348606|dbj|BAC45623.1| blr0358 [Bradyrhizobium japonicum USDA 110] Length = 689 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 40/293 (13%), Positives = 91/293 (31%), Gaps = 23/293 (7%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED--GSFESKIE 84 I + G ++++ G +I + P +V D+ + +D G ++ Sbjct: 26 IPSGFLTSTIASRVESATGYRLSIDGTTRISLWPTLNVTLNDLTLQDPKDRSGITRLTVD 85 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST-MDMIHNVILEKIH 143 + + SG ++ ++ + +P L L + + N ++++ Sbjct: 86 SVQADMSLSSVWSGRPKISELIVTRPVLYQPLLRERLPNAGTSSKPLALDTDGATIDRVK 145 Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203 V G + +S +N ++ +V GT + Sbjct: 146 VTDGEVAFARVRDRVESRISAINAD------------AVVGRDRNVSITGTARVGEHPTK 193 Query: 204 FKITANFPA---KNKAISLKIQLF-PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259 F I A PA I ++ + P + + + + +GV GD + Sbjct: 194 FDIKATTPAPPTDRPTIPVEFAIDMPDVLKSRLAGHAEMRLSGDLVMINGVNGTLGDGAF 253 Query: 260 LLNLELS-AKKSRLSGNFKISDGNVRISR-YKLQSILP--NSSTDEDNKTKVS 308 + A K + + + +++ S P N+ D V Sbjct: 254 NGWASVDIASKPLVKVDLDFQRLTIPLAKSPDGASGQPWSNAPIDVSGLNYVD 306 >gi|329115313|ref|ZP_08244067.1| Hypothetical protein APO_2392 [Acetobacter pomorum DM001] gi|326695292|gb|EGE46979.1| Hypothetical protein APO_2392 [Acetobacter pomorum DM001] Length = 625 Score = 84.2 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 35/331 (10%), Positives = 86/331 (25%), Gaps = 36/331 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R + G + +V V + + + + + +G+K + G + + + Sbjct: 1 MPRWVWLAGSVLAVSTVAIGVLLAGLPHYNLAHIASDKISASLGRKTQI-GALHVRFGRW 59 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 +V ++ + GS ++ L + L +G+++ D+ ID F +S Sbjct: 60 VTVDLDNLHLANIPQGSRADMISLKHLHAQILLSSLFNGQMQARDVKIDGFSGLFERTST 119 Query: 120 GVSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 NW + K I L + + Sbjct: 120 REPNWRFGKKASSAPAKPKEPSGKIWFPGLRDAAITDSEVIYRSAHGHSYVT-------- 171 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP--AKNKAISLKIQLFPLA 227 L S ++ G ++ + + + + Sbjct: 172 ----GLKAVALHSTSDTAPLVMNVNGAYNGTPVTLQANMQPIDVLRQAGKPYGTDIHAAS 227 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK------LLNLELSAKKSRLSGNFKISDG 281 + + L G + + S+ + LSG+F Sbjct: 228 GDLSLHLNGTMTDLFDFDGIDAKLDLQTATSRPIMAFAGEADSKITQPVTLSGHFTHKGD 287 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312 + + N S ++ + Sbjct: 288 VWHLDH---TTGSLNESPISTADVTFTEGAK 315 >gi|172036880|ref|YP_001803381.1| hypothetical protein cce_1965 [Cyanothece sp. ATCC 51142] gi|171698334|gb|ACB51315.1| hypothetical protein cce_1965 [Cyanothece sp. ATCC 51142] Length = 1230 Score = 84.2 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 114/337 (33%), Gaps = 32/337 (9%) Query: 6 LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65 LI G L S+ + V F+ + +Q + + +++ V + + Sbjct: 33 LITGGILVSLGVATYGGVSYFV-YEKLSPLLSQQLSKALEREVRVGEVESFSLN---HIR 88 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 + I E+ + GL ++ LPLL G+ ++ ID P+L + G F Sbjct: 89 IGETSIPTTENDPDRLDLNGLKVKFNPLPLLIGQPLDINITIDDPNLYVEQNPSGKWLGF 148 Query: 126 QRKSTMDMIH---NVILE-KIHVKGGRIKIIDQESDQVYFLS-DLNLQISARF---LNII 177 Q + ++ I + ++ I + I ++ ++ + D R I Sbjct: 149 QEREQIEDIELDLPIDIDADIELNNANIALLPNGFKELIKVDADGTAGYRYRSNEEQEIN 208 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 L + + S+ +G N + ++ ++ + A + +L L +++ N Sbjct: 209 YDLDVSLLNSSIAVQGETNIKSFQTQAELMISQLALPELAALIPNLPVTLKSGLVESNLN 268 Query: 238 LFWNE----KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 + + +G F ++ + L L++ +L ++ V+ + + Sbjct: 269 INVPSLEEIEGTEGNGNFQLSNVQAGLEALKVP---IKLDLALDFNNKTVQFNETRFSL- 324 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330 + +G D+N Sbjct: 325 ---------GEFVTDIKGSLNWQ---DGYNIDVDINP 349 >gi|188579664|ref|YP_001923109.1| hypothetical protein Mpop_0396 [Methylobacterium populi BJ001] gi|179343162|gb|ACB78574.1| conserved hypothetical protein [Methylobacterium populi BJ001] Length = 1179 Score = 84.2 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 103/313 (32%), Gaps = 13/313 (4%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R +L L +VLV A VP FIDW+ R +R T +G +G I + +LP Sbjct: 1 MRDILTALAGAVVLVLVAALAVPPFIDWSAHRALIDRALTDSLGAGARSEGAIDLRLLPS 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P + +R+ ++ + PLL GE+R I++ L +S + + Sbjct: 61 PHLRLARLRLGAEDG--PALDARSVDAEIALAPLLKGEVRFVQTAIERADLTLPVSDEAL 118 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + ++ ++++ + ++ + + NL++ A L + Sbjct: 119 LLPREPQALRRD---IVIDDLRIRRLSLATARTGEAPQAQFTAENLRLRAPALAGPWLVE 175 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240 + + + + K+T + ++ P P GN Sbjct: 176 GTAKGSPFHLATSTAGGDGGVSLKLTGGGDTMPRLELDARLTFKPEDAPG-----GNRAH 230 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 P G + + + L+ F+ + +++ + Sbjct: 231 RGLVPEAEGTARLT--VGPPVQPAGAVLPLTLAAKFEARGPVAQAKTVEIELDPGGKAAR 288 Query: 301 EDNKTKVSQDEEN 313 ++ E Sbjct: 289 LSGSGRLDLREAR 301 >gi|254558834|ref|YP_003065929.1| hypothetical protein METDI0195 [Methylobacterium extorquens DM4] gi|254266112|emb|CAX21864.1| conserved hypothetical protein; putative exported protein [Methylobacterium extorquens DM4] Length = 1175 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 110/322 (34%), Gaps = 31/322 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R L L +VLV A VP FIDW+ R +R + +G +G I + +LP Sbjct: 1 MRDSLTALAGAVVLVLVAALAVPPFIDWSAHRALIDRTLSDSLGAGARSEGAIDLRLLPS 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P + +R+ ++ + + PLL GE+R +++ L +S + + Sbjct: 61 PHLRLARLRLGAEDG--PALDAQAVDAEIALAPLLKGEVRFVQTSVERAGLTLPVSDEAL 118 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + ++ ++++ + ++ + + + NL++ A Sbjct: 119 LLPREPQTLRRD---IVIDDLRIRRLTVATLRTGEAPQEQFAAENLRLRAP--------- 166 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 ++ G +AEGT F + + + ++SLK+ P ++L + Sbjct: 167 --ALAGPWLAEGTAKGS----PFHLATSVAGSDGSLSLKLTGGGDTMP-RLELDARITLK 219 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS----------RLSGNFKISDGNVRISRYKLQ 291 + + L+ L+ F V+ +L+ Sbjct: 220 PEDASDADRVRRGLVPEAEGTARLTVGPPVQPAGAVLPLTLAAKFASRGPLVQAETVELE 279 Query: 292 SILPNSSTDEDNKTKVSQDEEN 313 + ++ E Sbjct: 280 LDPGGKAARLSGNGRLDLREAR 301 >gi|218778090|ref|YP_002429408.1| hypothetical protein Dalk_0231 [Desulfatibacillum alkenivorans AK-01] gi|218759474|gb|ACL01940.1| protein of unknown function DUF748 [Desulfatibacillum alkenivorans AK-01] Length = 1096 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 58/416 (13%), Positives = 122/416 (29%), Gaps = 62/416 (14%) Query: 2 LRRVLIGLGFLF-SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 L+++ I + L + ++G VP I W R G+K +++ + P Sbjct: 13 LKKIFIIILGLVTAYTIIGFVLVPAIIKWG-----VVRIIEKDYGRKASIE---DVAFNP 64 Query: 61 F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSS 118 + ++ I + + GLS+ + + S V ++ ++ P + ++ Sbjct: 65 YGLTLRVDGFTILDPD-ETAFVSFGGLSVDVKVWDSITSMAAVVGEVDLENPLVRITMNE 123 Query: 119 KGVSNWFQRKSTMDM---------------IHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 G N+ + L+ + V GG I +D++ D + + Sbjct: 124 DGGFNFADLIPASNPETNAPEENNEEQEKKPPRFSLDILSVSGGNIVFVDKQKDATHKII 183 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 DL + + D + V + + + + S I Sbjct: 184 DLFVAVRGLSGLP------DDLDNPVEINLEASINGAPLTVEAESLIFDPKLKSSAGISF 237 Query: 224 -FPLAYPIII---DLFGNLFWNEKQPIYSG----------------VFSVAGDFSKLLNL 263 A P + G K +Y+ V+ + Sbjct: 238 RDISAAPYKAYIPAIEGRTLVTAKTGVYAAIQYSMEESGAHNLAVRNLKVSDTLLAWEDP 297 Query: 264 ELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 ++ + G ++IS G + L VS D L +NGA Sbjct: 298 FKDPEQPEIRGPYQISLGKFSLGLDVLVKDPAVMDVLVK-DADVSLDNLQLFA--QNGAL 354 Query: 324 SMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 + E + ++ N D+ + E + + +MI Sbjct: 355 ------KLAGVEHFDVQDANADMAALKASVGAVNTNGGWFAAALEPTKRINITRMI 404 >gi|255007793|ref|ZP_05279919.1| putative outer membrane protein [Bacteroides fragilis 3_1_12] gi|313145498|ref|ZP_07807691.1| outer membrane assembly protein [Bacteroides fragilis 3_1_12] gi|313134265|gb|EFR51625.1| outer membrane assembly protein [Bacteroides fragilis 3_1_12] Length = 837 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 40/346 (11%), Positives = 97/346 (28%), Gaps = 41/346 (11%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGG---IKIHI 58 +++ L + V+L+ F +P FR E K + + + I + Sbjct: 1 MKKGLKITTIVIGVILILMFLLPF-----AFRGKIEGIVKAEGNKMLNARFDFSSLDISL 55 Query: 59 ---LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112 P SV D + K ++ L V + + L Sbjct: 56 FRNFPKASVTLNDFWLKGTGAFENDTLVKAGEVTAAINLFSLFGDSGYDVSKVSVTDTWL 115 Query: 113 NFYLSSKGVSNWFQRKSTMDM-----------IHNVILEKIHVKGGRIKIIDQESDQVYF 161 + + G +NW K V L++ +K + D++S Sbjct: 116 HAIVLPDGKANWDIMKPDSATVSETSESSESSPFRVKLQRFVIKNMNVVYDDRQSVMYAD 175 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221 + + N S + + L++++ ++ + G ++ + A + Sbjct: 176 IHNFNALCSGDLGSDQTLLNLEAETEALTYKMNGIPFLSQANIYAKMDVDADLVHHKFTL 235 Query: 222 QLFPL-AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280 + I + G + + + + K + + A Sbjct: 236 KKNEFCLNAIKAGIDGWVELKDPAIDMDLKLNTSEVGFKEILSLIPA------------- 282 Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + +K ++ + K + D + + +M Sbjct: 283 --IYSKEFKNLKTDGTATLEATAKGVLQGDTVPRFDVRLSVKNAMF 326 >gi|218528414|ref|YP_002419230.1| hypothetical protein Mchl_0365 [Methylobacterium chloromethanicum CM4] gi|218520717|gb|ACK81302.1| conserved hypothetical protein [Methylobacterium chloromethanicum CM4] Length = 1175 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 110/322 (34%), Gaps = 31/322 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R L L +VLV A VP FIDW+ R +R + +G +G I + +LP Sbjct: 1 MRDSLTALAGAVVLVLVAALAVPPFIDWSAHRALIDRTLSDSLGAGARSEGAIDLRLLPS 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P + +R+ ++ + + PLL GE+R +++ L +S + + Sbjct: 61 PHLRLARLRLGAEDG--PALDAQAVDAEIALAPLLKGEVRFVQTSVERAGLTLPVSDEAL 118 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + ++ ++++ + ++ + + + NL++ A Sbjct: 119 LLPREPQTLRRD---IVIDDLRIRRLTVATVRTGEAPQEQFAAENLRLRAP--------- 166 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 ++ G +AEGT F + + + ++SLK+ P ++L + Sbjct: 167 --ALAGPWLAEGTAKGS----PFHLATSVAGSDGSLSLKLTGGGDTMP-RLELDARITLK 219 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS----------RLSGNFKISDGNVRISRYKLQ 291 + + L+ L+ F V+ +L+ Sbjct: 220 PEDAADADRVRRGLVPEAEGAARLTVGPPVQPAGAVLPLTLAAKFASRGPLVQAKTVELE 279 Query: 292 SILPNSSTDEDNKTKVSQDEEN 313 + ++ E Sbjct: 280 LDPGGKAARLSGNGRLDLREAR 301 >gi|153011244|ref|YP_001372458.1| AsmA family protein [Ochrobactrum anthropi ATCC 49188] gi|151563132|gb|ABS16629.1| AsmA family protein [Ochrobactrum anthropi ATCC 49188] Length = 649 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 32/318 (10%), Positives = 87/318 (27%), Gaps = 45/318 (14%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79 VP + R ++ + G + ++ ++ + P + + + Sbjct: 27 VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLKVFPVLRASLNGVTLSKLTDQGQKP 86 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF-------------YLSSKGVSNWFQ 126 + + + L + G I + I +PH+N +S G Sbjct: 87 LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLDGPISNFSQLLDAIANSNGRLGTAI 146 Query: 127 RKSTMDMIHNVI------------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 R ++ V+ G I +S+ + + Sbjct: 147 RAQRALQKDGSGDNAQATQQASQPFGRVVVRDGTIAFNRPDSEPEITSDE-------QIT 199 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIID 233 ++ + L + +G+ + + S F +TA + + A P+ + Sbjct: 200 DVNATLEWPRTSSAATLKGSAKWREETSQFSLTAAQALPLLAGGTSDVTASLTANPLSLT 259 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVR 284 G ++ + + G + LS L + ++ Sbjct: 260 FQGKANISKDRF-FEGDLTAKTPSLSGAVRWLSLPPIAGSAEIGAFSLESTITATPKRLK 318 Query: 285 ISRYKLQSILPNSSTDED 302 + ++ + + + Sbjct: 319 FADVEMTASDSPAKGVIE 336 >gi|322436779|ref|YP_004218991.1| AsmA family protein [Acidobacterium sp. MP5ACTX9] gi|321164506|gb|ADW70211.1| AsmA family protein [Acidobacterium sp. MP5ACTX9] Length = 556 Score = 83.8 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 24/268 (8%), Positives = 69/268 (25%), Gaps = 33/268 (12%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE--DGSFESKIEG 85 + ++ + +G+ + + + +++LP PS ++ I + + Sbjct: 58 NVNRYKRQIVTSISTSLGRPVHID-SVSLNLLPLPSFTLENFVISEDPAFGAEPVLQANE 116 Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN-----------WFQRKSTMDMI 134 + L + + +D P +N G N + Sbjct: 117 VRANLRVSSLWRRRVEFSRIALDSPSVNLVHLPDGRWNLESILLQASRMPAAPTAQKKAG 176 Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI---SARFLNIISPLSIDSIKGSVIA 191 I G R+ + L++ + + ++ Sbjct: 177 TAPRFPYIEATGARVNLKMGLEKMPISLTEADFALFLPEPNEWHLRLKTHFVRTDAPPTD 236 Query: 192 EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 G + T + A+ + + P+ G + W Sbjct: 237 TGILRVEG-------TLGRASTLAAVPVDLHADWETAPL-----GAVSWVLMGRDA---- 280 Query: 252 SVAGDFSKLLNLELSAKKSRLSGNFKIS 279 + G+ + + + + L + + Sbjct: 281 GLRGEMNLTAAVTGTVGSNNLDTHLTLQ 308 >gi|332701659|ref|ZP_08421747.1| AsmA family protein [Desulfovibrio africanus str. Walvis Bay] gi|332551808|gb|EGJ48852.1| AsmA family protein [Desulfovibrio africanus str. Walvis Bay] Length = 1271 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 41/368 (11%), Positives = 97/368 (26%), Gaps = 57/368 (15%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81 +P F+D + E +G +A++G + + +LP P + + + DG Sbjct: 24 LLPHFVDTRQVKARLESVMADALGMPVAIRGELGLRLLPTPELRLGGLELGHGADG-PLV 82 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV---- 137 + + LL E+ + ++ +D L + G N + I Sbjct: 83 SCREVRLSLSLSRLLRREVLLRNVVLDDIVLRLSRGTDGRLNLQLPQILAVRIEGAPGGE 142 Query: 138 -----ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL----------SI 182 + + + G + ++D + L L+ + + Sbjct: 143 RFTFQGVNNLSIT-GSLLLVDASTGMRLELERLHARYRKGREQLFLSGALRMAWPEQYRF 201 Query: 183 DSIKGSVIAEGTGNF---------------------DNKRSAFKITANFPAKNKAISLKI 221 ++ SV A G D ++ A + + Sbjct: 202 PRLEASVNAVGGLKLEDRVLRVQGFDVQAGLVLQARDGTARTGTLSTRLDLDTAAGTFRT 261 Query: 222 -QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS------- 273 +L + + +P+ S + L + L ++ Sbjct: 262 RELEAALGELRLTGSARGKDILSEPVLSASLQAEAGDAAALAMALGLPTPTVAYGRQTPV 321 Query: 274 ---GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330 + + + + +L + + + N A D Sbjct: 322 QAGLELEARSDGLDVRKLRLSLGES----EIAGQVSLLGWAAPAWKIELNAARLNLDELR 377 Query: 331 TDFFEEEE 338 + E E Sbjct: 378 PAVWPEAE 385 >gi|317403444|gb|EFV83955.1| hypothetical protein HMPREF0005_01938 [Achromobacter xylosoxidans C54] Length = 1226 Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 94/287 (32%), Gaps = 22/287 (7%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LPF 61 + ++ VV +G V ++ +R E A+ +G ++A+ G I+ Sbjct: 25 LFWVALTVYGVVAIGLLGVRYWVLPRVDQWRPQIEAYASQALGARVAI-GAIRADWQGLN 83 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P + +++ + + +S + L + + + ++QP L + Sbjct: 84 PKLELSSVQVYD-DVPEPVLSLPSVSAVLAWRSLFTLSPTLLRLRVEQPDLTLRRDAANR 142 Query: 122 SNWFQR------KSTMDMIHNVIL------EKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQ 168 + +++ L ++ ++G RI+ D+ L++++L Sbjct: 143 LWVAGQGIDLNASDHQSDLNHPALRWLTGQREVQIRGARIRWQDELRQAPDLVLNNVDLL 202 Query: 169 ISARFLNIISPLSIDSIKGSVI-AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 + L+ L D + G F+ + + + + PLA Sbjct: 203 VRNGSLSHRFVLRADGDPVLARKVDLRGEFNRSLFSANAASPANWSGQLYAALDDAEPLA 262 Query: 228 YPIIID---LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR 271 + + + G + + G F+ ++ SA Sbjct: 263 WAPWLSPPPIKGRISTRAWLQLDHGKFTTLTADVATRGVDWSAAPGA 309 >gi|254410411|ref|ZP_05024190.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] gi|196182617|gb|EDX77602.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] Length = 1925 Score = 83.4 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 38/363 (10%), Positives = 115/363 (31%), Gaps = 19/363 (5%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64 LIG+ + V + G + R T ++ + + + + + + Sbjct: 32 WLIGISIILLVGIAGGMGFAWYFIQQMLAPLVARNLTQLLQRPVEIGEVERFSL---TGL 88 Query: 65 FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS-N 123 F + + + IE + ++ + LPL+ ++ + +P + + G Sbjct: 89 RFDSAALPPTDTEPDRASIEAVEVQYDLLPLIFDRRLELNVTLIEPDVYIEQAVDGSWMP 148 Query: 124 WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQES-DQVYFLSDLNLQISARFLNIISPLSI 182 ++ V L+++ V+ ++++ + + + + + + + + Sbjct: 149 LELKEQGEPGPIEVDLQQLGVRNAEVQLVPRSTEGKQQSPVAIAIPQGSSQFLQDNDIIR 208 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF-GNLFWN 241 ++G + + GT N + F +A + ++K P+ +D+ GN+ + Sbjct: 209 FDVQGEIASGGTFNLQGEHL-FPTSATHLQVDGQ-NVKASTLDRLIPLPLDVNAGNVGGD 266 Query: 242 -----EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 + + + + +L + +G + + +R+ Q Sbjct: 267 LEITIKPDQPLQFLGNATLNNVTAQVPQLPQAFANTNGRLRFKETTIRLEDVTTQFGQI- 325 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356 + + N + F EE + ++K + Sbjct: 326 -PVTANGSVDLETG----FNLTAQTQAVQIKTVLQTFNLEETPVPLSGEVKAALLVTGSL 380 Query: 357 KKE 359 + Sbjct: 381 TQP 383 >gi|154247686|ref|YP_001418644.1| AsmA family protein [Xanthobacter autotrophicus Py2] gi|154161771|gb|ABS68987.1| AsmA family protein [Xanthobacter autotrophicus Py2] Length = 654 Score = 83.4 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 90/297 (30%), Gaps = 28/297 (9%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64 V I +G + + +LV +PL + + R G+K+ + G + + P P V Sbjct: 29 VAIVIGAITAALLVVTAALPLVVPGAELRRIAVHALAGSTGQKVVILGEPALRLFPSPRV 88 Query: 65 FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124 + S E + R + LL+G + V D+ ++ P L G Sbjct: 89 VLGKVSFPLPSGQS--LDAENVVTRLDIWHLLAGRVEVDDVIVEHPTLVLT---GGGLTP 143 Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 + + + ++ + G I + +S L + Sbjct: 144 ALAVAPIFAAAHWP--ELRIVDGTIAWRSEGGLTRELVSGLTANLDRVVAGRG------- 194 Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKN-KAISLKIQLFPLAYPIIIDLFGNLFWNEK 243 + ++ ++R + + A ++ A G Sbjct: 195 ----LALGAAFDWRDERVTVNLVLDDAAGFLNGTPSPARVVLAATGAEARFQGRAAL-GT 249 Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRISRYKLQS 292 P+ +G S D + L + LS + + DG + ++ L Sbjct: 250 APVLTGTLSAEADALRDLLDWAGIEPPTRGGLGPFALSTHLALEDGGLALTDASLDL 306 >gi|33602208|ref|NP_889768.1| hypothetical protein BB3232 [Bordetella bronchiseptica RB50] gi|33576646|emb|CAE33724.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 1219 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 39/390 (10%), Positives = 110/390 (28%), Gaps = 41/390 (10%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI 58 +LR + + ++ V+ V + ++ +R E+ A+ +G ++A+ + Sbjct: 23 ILRLLFWSVFAIYGVLAVAFLGLRYWVLPRADQWRPQIEQYASQALGSRVAID-SLSADW 81 Query: 59 -LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 P + +RI + ++ + +L + + ID L Sbjct: 82 SGLNPRLNLSGVRIYD-HQADPVLSLPSVAAVLGWRSVLKLSPTLQSLRIDGADLLVRRD 140 Query: 118 SKGVSNWFQRKSTMDMI------------HNVILEKIHVKGGRIKIIDQE-SDQVYFLSD 164 S + + ++ ++G ++ D+ L Sbjct: 141 SADRLWVAGQSIDLAAPSDHGFTESPALRWLARQRELALRGVTLRWQDEARQAPELRLDG 200 Query: 165 LNLQISARFLNIISPLSID---------SIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215 L+L + L+ L + S++G + + +++ ++ Sbjct: 201 LDLLVRNGVLSHRFSLRVRPPAQLAAKVSLRGELNRSLFARDGSNPASWSGQLYAEVQDA 260 Query: 216 -AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL-----LNLELSAKK 269 + + A L + + A ++ + + + Sbjct: 261 EPAAWAPWVAMPAAQGRYAARAWLQLDHGKFT-DLTMDAALRGLNWRAGQSASVSVDSAQ 319 Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL---NFSENGAESMH 326 RL G ++ S L + + + + + A+ Sbjct: 320 WRLQG---APGDLLQFSDLPLARSADGAGVSVTGQADGLWLNLPEIFEHPLALDRAQLDA 376 Query: 327 DLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356 L E + + L D+ +++ Sbjct: 377 SLTEPAG-QPLTLNLRRLQLANPDLDATLH 405 >gi|307299852|ref|ZP_07579637.1| AsmA family protein [Sinorhizobium meliloti BL225C] gi|306904741|gb|EFN35324.1| AsmA family protein [Sinorhizobium meliloti BL225C] Length = 1007 Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 49/380 (12%), Positives = 124/380 (32%), Gaps = 27/380 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR ++ L + ++ + +P I R + RQ + G IA G + + P+ Sbjct: 1 MRRFILSLLGVAALAVAAIAVLPSLISSDWVRAELGRQLSAATGSSIAFNGPVNLSAFPY 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS--- 118 +V +D+ + + +G ++ +S L S + + + +D+P + + Sbjct: 61 LAVVAEDVTLSAEAEGIT-AEFAEVSGSVALSSLWSDRLHIKQIALDRPVIVLEEKAADE 119 Query: 119 --------KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + + + + +E + + G I D +SD+ L +S Sbjct: 120 AASTADRGNETGSGDPLPALVAFLERSAIESVSITSGTF-IRRSAEDPEEVVSDVELTLS 178 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 A ++ LS + G + + + + ++++ P Sbjct: 179 APDIDDEFSLSASARMGGRSYDTSFTIS----TLRSLLERQPADITLAVEADPAPAPGMS 234 Query: 231 IIDLFGNLFWNEKQ--PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR-ISR 287 ++ G + N I G L L + +++R + + ++ Sbjct: 235 SLEASGQVTLNANGSYQIRGGEVEAGEQAFSLNALFVPGQRARFLLDLEADRLDLTPFMD 294 Query: 288 YKLQSILPNSSTDEDNK-TKVSQDEENLLNFSENGAESMH------DLNETDFFEEEEKK 340 ++ + + + + S N A + D++ + ++ E Sbjct: 295 AAPEASQSGAPSAGTANPANLQFLAGFDADMSINAAALVLGEISASDVSFSAALKDGELA 354 Query: 341 NKNDDLKKDDIQYSVNKKEE 360 + L D + N Sbjct: 355 AELGHLGIDAGSLAANVATN 374 >gi|86159908|ref|YP_466693.1| hypothetical protein Adeh_3490 [Anaeromyxobacter dehalogenans 2CP-C] gi|85776419|gb|ABC83256.1| protein of unknown function DUF748 [Anaeromyxobacter dehalogenans 2CP-C] Length = 953 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 102/315 (32%), Gaps = 24/315 (7%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-F 61 RR + G + +LV + R +QA+ + + + + ++ + P Sbjct: 11 RRRWLRAGAVLGALLVLYTAFGFLAAPSLVRRIAVKQASAALHRPVEIN---RVRVNPLA 67 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 SV + +R+ + + + L +R L LL+G++ ++ + +P L+ L +G Sbjct: 68 LSVTVEGLRVKHADGA-PFAAWDSLHVRLAPLRLLAGDLGFAEIRLVRPALHVGLDPRGA 126 Query: 122 SNWFQRKSTMDMIHN--------------VILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 + + + + ++ V+ R+ D + + L Sbjct: 127 LTFEDLLAGDPEAAEPGAPAAPEKEGRLGLSIGRLAVEEARVVFRDATRKPAFETTLGPL 186 Query: 168 QISARFLNIISPLSID-SIKGSVIAEGTGNFDN--KRSAFKITANFPAKNKAISLKIQLF 224 + S G+ + T + + + + + + + Sbjct: 187 TVRLESFRTRGGGDSPYSFAGTTESGETFRWTGTVRSAPLRSSGTLAFERIQLPKYAPYI 246 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 P+ + G L + G V L +E A R + + V Sbjct: 247 HDQAPVDL-AEGVLDLETGYELAWGADARVLRTSGGKLTVERLALAPRGERDAPVRLPRV 305 Query: 284 RISRYKLQSILPNSS 298 +S ++ ++ +S Sbjct: 306 EVSGIRVDALAKEAS 320 >gi|226941062|ref|YP_002796136.1| transmembrane protein [Laribacter hongkongensis HLHK9] gi|226715989|gb|ACO75127.1| Probable transmembrane protein [Laribacter hongkongensis HLHK9] Length = 1274 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 40/323 (12%), Positives = 95/323 (29%), Gaps = 39/323 (12%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGL 86 + ++ E++ + +G + + G + + P ++ + ID G + ++ L Sbjct: 49 NLGTYKPQLEQELSAALGHAVHI-GSLTGSLQGPVLTLALHQVEIDNPNPGGYPLQLAEL 107 Query: 87 SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV-------SNWFQRKSTMDMIHNVIL 139 S R + L+S R + + P L+ + G + + + + + Sbjct: 108 SARPSWKSLISWSPRFTRITLTAPELSLRRARDGHLYLNGIVLDGSRSSDSQMLDWLLEQ 167 Query: 140 EKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD 198 ++I ++ R++ D+ L+ NL + L+ + +G D Sbjct: 168 DEIRIEQARLRWRDEAMGLAELDLTQGNLSLVQGLFGHRLTLTAHAPEGW--------LD 219 Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS 258 R + + K L + D L W P G V F+ Sbjct: 220 AFRFQMTWRGDRLENWRTWRGKFALDVGGANL-ADWRRTLAWLAHMPAGQGGARVEASFA 278 Query: 259 KLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ---SILPNSSTDEDNKTKVSQDEENLL 315 G F + L+ + + + + ++ + Sbjct: 279 --------------DGQFTSGQARFDLKNVVLRPEAAGPLVAVPNLSGEVELKPGADGGS 324 Query: 316 NF---SENGAESMHDLNETDFFE 335 + L + F Sbjct: 325 ELLARNLVAQTIDGKLFDRAEFR 347 >gi|307153271|ref|YP_003888655.1| hypothetical protein Cyan7822_3431 [Cyanothece sp. PCC 7822] gi|306983499|gb|ADN15380.1| protein of unknown function DUF490 [Cyanothece sp. PCC 7822] Length = 1817 Score = 83.0 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 48/398 (12%), Positives = 121/398 (30%), Gaps = 33/398 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR+ +GLG + V + G F+ E++ + + + + + I + Sbjct: 40 RRLWLGLGSVLLVSITGGLVYGRFVIEQQLAPILEKELSDFLNRPVKIGSVEGISL---T 96 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 V F I + + + + + S D+ +P++ G Sbjct: 97 GVRFGKSEILPTPTDPAKISLAEVDVSFNPVKFFSHSQLTLDVKAIRPNIYLEQGVNGSW 156 Query: 123 NWFQRKSTMDMIHN---VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN---- 175 V LE + + + + + + S + L + + N Sbjct: 157 LMTPFDVIKSNGSQEGAVELESLQFINADVVLRARSATKQLN-SAVKLFVPSLKTNFANQ 215 Query: 176 ----IISPLSIDSIKGSVIAEG-----TGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 + + + G G TG + + A A+ L ++ + Sbjct: 216 GRIVDFVGVGLLAKGGKAKLSGVAKTNTGEINLVVLGHSVQAADLKNLIALPLNLKNGEV 275 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 + + L ++ P GV ++ +L ++ +G + +D +++ Sbjct: 276 GGNLEVHLK-----PKQLPSLKGVATL--ANVTAQIPQLPQAFAQTNGLLRFNDHQIKLE 328 Query: 287 RYKLQSIL----PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342 Q N + + +S + + + + + + + Sbjct: 329 GVTTQFGKIAAVTNGTINLKGNYALSAKTLP-FQVQDALSTLKIPASSLPISAQLQSQFQ 387 Query: 343 NDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMIL 380 + ++ Q S+N K DK N ++F + + Sbjct: 388 -VNGTLNNPQVSLNLVTTKPAVIDKINFQSFQANLQLF 424 Score = 39.9 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 88/332 (26%), Gaps = 38/332 (11%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHI------------LPFPSVFFKDIRIDQKEDG 77 F + Q +G V G + + LP ++ + I Q Sbjct: 612 NQFVPNLPHQLNGRLGGNFTVTGDLNSTLADIQGSGQAHFNLPSGTIKANQLEIHQGFWQ 671 Query: 78 SFESK--IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH 135 + ++ ++ L G+++ + ++ N + + Sbjct: 672 ATLKTDNLQLANLIPNLSTPLRGKLQG-QLSLEG---NLESRLEDIQGTGYGSLI-SSAG 726 Query: 136 NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS--VIAEG 193 + + I +KGG+ + + L+ + Q ++ + + AEG Sbjct: 727 TIAAKHILIKGGK--FESLITPEQVQLASFSPQFKGFLGGKLNISGNINNLNPTAIKAEG 784 Query: 194 TGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPIIIDLFGNLFWNEKQP---IYSG 249 NF S L +Q + L +L Sbjct: 785 NLNFSQGLSLINRALTTTVAWSGKRLDILQATASDFNAKGFLEMDLSSKNPLSAINKLDL 844 Query: 250 VFSVAGDFSKLLNLELS-AKKSRLSGNFKISDG----------NVRISRYKLQSILPNSS 298 S G K L S A++ + G + IS L N Sbjct: 845 NVSAKGFDLKQLTASFSQAQQWNIGGRLNFEGKIAGTPQKPHIDGAISLNNLSMAHENFE 904 Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330 + + D L + + + LNE Sbjct: 905 PELKGAISLVPDSGVKLQLAGDRDKIELSLNE 936 >gi|119475520|ref|ZP_01615873.1| AsmA [marine gamma proteobacterium HTCC2143] gi|119451723|gb|EAW32956.1| AsmA [marine gamma proteobacterium HTCC2143] Length = 1175 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 84/312 (26%), Gaps = 14/312 (4%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 R L + +++++G F+ R E T I ++ + G + Sbjct: 23 RTLTVTLVVSALIVIGGFSYLAL-KPNQLRPILEHLLTSITERQFQIAGDFDFQLGKELL 81 Query: 64 VFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + K + G +I + ++ L S + + + ++ HL F G Sbjct: 82 IHAKFVTWANASWGSAENMLEINSIDLQINLASLFSPPVIISHVNVENAHLEFEWDDDGR 141 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGR----IKIIDQESDQVYFLSDLNLQISARFLNII 177 NW + D + + + + + V + S + +I Sbjct: 142 MNWMLFDTDTDTDTDTDTDTDDGDPSAHPLPLLLGITNLNSVELAFKAPILTSPLLIKVI 201 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK---NKAISLKIQLFPLAYPIIIDL 234 S +++ +N+ ++ +S+ + L + + Sbjct: 202 SAKQELDQDNNIVIRSKALTNNRPFTLDGNMGRFSELVLAGEVSMDLTLESEFSALNVKA 261 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA---KKSRLSGNFKISDGNVRISRYKLQ 291 + N + + L L L +G + Sbjct: 262 DVDDLRNLSGANFDIDWQGKEIADTLEAFNLPIVTTGPVALKAKLDNQNGQLN-GHLDGS 320 Query: 292 SILPNSSTDEDN 303 + + D Sbjct: 321 VGDLSVAGDLKA 332 >gi|256828177|ref|YP_003156905.1| hypothetical protein Dbac_0362 [Desulfomicrobium baculatum DSM 4028] gi|256577353|gb|ACU88489.1| protein of unknown function DUF748 [Desulfomicrobium baculatum DSM 4028] Length = 1330 Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 30/285 (10%), Positives = 78/285 (27%), Gaps = 27/285 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 + + I + +G +P + + + ++I+V G I+++ Sbjct: 16 KTLAITTCCVALYAAIGFLLLPRIASY-----VLVEKVAPALSRQISV-GEIRVNPF-AM 68 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + D I + ++ + L E + + V + +D P ++ L G + Sbjct: 69 TADVSDFVIREPDESGEFVAFDRLHANLELSSIPRLALVVREARVDGPRIHIRLGQDGQT 128 Query: 123 NWFQRKSTMDMIH----------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 N+ +I+E + G + DQ + + + + Sbjct: 129 NFSDLTVGSAEPGPERTGEPMLLPLIVEPFTIGNGTLTFEDQARGVSHVVDQIQFNLP-- 186 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + + + + + + + + + LA P Sbjct: 187 ----RFSSRKKDWETFMTPTLSFRANGAPFNLEGRTTPFSNSLKTEFDLNVIDLALPQYW 242 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 E + G ++ E + L G Sbjct: 243 ---AYAMARENLQLSKGFLNLE-SKLAFEQFEDALPTFSLQGTIT 283 Score = 38.3 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 33/319 (10%), Positives = 91/319 (28%), Gaps = 29/319 (9%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 ++ +DI + +DG + + +L+ + + + ++QP+L G Sbjct: 281 TITGRDIEL--VDDGEPVLTAARTEAVMDDISILNLRLGLSSVVLEQPYLRVVRHKDGSL 338 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 NW + + ++ I Q + + D N+ S + Sbjct: 339 NW----MHYFVPPDAPVDSPANATAPSTPIAQNASAPITVEDGNIAGGDPNAANASAANA 394 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242 ++ +V + N A + L P I + G + + + Sbjct: 395 NTTVAAVTGNASMN---------EALEIDNATAARRDTARTLLLQVPTIRLVDGRVHFRD 445 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 + ++ + +L+ S + ++G + + S Sbjct: 446 ETTSFTKEIE--SLDLTITDLDTSLNATSVAG---LQMRTADGEAIDTNATFSVSPFRVL 500 Query: 303 NKTKVSQDEENLLN--------FSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354 +V + + A++ + E+ + ++ L+ D+ Sbjct: 501 ALIEVRDLDIPSYASYFKDALPLTLATAKADAGIRFAIDGEDRALRLEDSSLEIRDLSLK 560 Query: 355 VNKKEEKDNSHDKENQENF 373 + + +N Sbjct: 561 A-ADGAGEIKLGRAALDNI 578 >gi|209521475|ref|ZP_03270181.1| conserved hypothetical protein [Burkholderia sp. H160] gi|209498081|gb|EDZ98230.1| conserved hypothetical protein [Burkholderia sp. H160] Length = 1416 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 89/307 (28%), Gaps = 25/307 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTV------PLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55 LRR L L L V+ A + + FR E + + + + G + Sbjct: 27 LRRTLRVLATLALVLYFIATGLFLGLRYVVLPRADQFRPRIEATVSDKLRTQFTI-GRLA 85 Query: 56 IHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 H F P + ++ I + I + + L + + +DQP + Sbjct: 86 PHWSGFQPGLDITNLVIRDHDG-QPALTIPHATAAVSWRSLWEFHPALSSLIVDQPDVLV 144 Query: 115 YLSSKGVSNWFQRKSTM-------DMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLN 166 S GV + + + I V+GG ++ D + L D+ Sbjct: 145 SRSEDGVLSVAGVPVPTRHSGNDVLSTWLLRQQAIVVRGGVLRWRDATRKEPELALRDIR 204 Query: 167 LQISARFL----NIISPLSIDSIKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAISL 219 + I + +P +KG + + + + L Sbjct: 205 IAILNDGHEHRMALQAPPDGQVLKGPLDFRTSFRHAPLSAIGKPINWSGQAYVSTGPVDL 264 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 + +PI G + G + A ++ L + ++ ++ Sbjct: 265 PTLARYVDFPIE-TFAGRVDNAIWIDFTEGRMTQASGQLNGNDVALRVRPTQPKLLLPVA 323 Query: 280 DGNVRIS 286 R+ Sbjct: 324 HFLWRLG 330 >gi|167753537|ref|ZP_02425664.1| hypothetical protein ALIPUT_01814 [Alistipes putredinis DSM 17216] gi|167658162|gb|EDS02292.1| hypothetical protein ALIPUT_01814 [Alistipes putredinis DSM 17216] Length = 838 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 99/303 (32%), Gaps = 28/303 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-P 60 ++ +L+ LG + +V+ +P + E+ + +VG++I ++ K+ Sbjct: 5 IKILLVTLGIIAVLVVTTILLLPPI-----AKNYLEKHSKELVGRQITIE---KLRFNVL 56 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + I + + +D + + + R LPLL I + + ID+P+LN Y Sbjct: 57 NGKLRIDQIAMLEPDDSTTFASLGNFYTRIHLLPLLRQRIHIDAVLIDKPYLNVYQDGT- 115 Query: 121 VSNWFQR-----------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 N+ + V ++ I + G + D + + + ++L++ + Sbjct: 116 SFNFDDLLTRFLTPADTVEKAPSNPWTVDIDDIKIHNGELTYKDMQRNVTWGFNELDIDV 175 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 L+ + G+ + TA++ +L + + Sbjct: 176 PGLHLSGH---ERTDMGIVFNFSRGGSLRTSLEYDQATADYDLSLLLSNLSLAGTAAYFN 232 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 +ID+ E + L A S L + + + Sbjct: 233 QVIDI----GSVEGLVTLDLHVKGNANHLLDLRTYGIAAASGLKLRDSRDNRIIDVDTLN 288 Query: 290 LQS 292 Sbjct: 289 FDL 291 >gi|302035662|ref|YP_003795984.1| hypothetical protein NIDE0277 [Candidatus Nitrospira defluvii] gi|300603726|emb|CBK40057.1| protein of unknown function; AsmA family [Candidatus Nitrospira defluvii] Length = 702 Score = 82.6 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 100/327 (30%), Gaps = 51/327 (15%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--F 79 +P ID +++ + ++ +K+ ++ I++ I P + Sbjct: 20 ALPFLIDLNKYQDRYRPLIEEVLNRKVELR-DIRLTIWPRIGARVGGFVVQDDPAFRTGP 78 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN--- 136 + + L + + LPLL G + V ++ + P + +++G N + Sbjct: 79 FASLSSLDVGVKLLPLLKGTVEVEEITLRDPVITVLKNTQGQLNISTLGAKTPAPPAPSK 138 Query: 137 -----------------VILEKIHVKGGRIKIIDQESDQ--VYFLSDLNLQISARFLNII 177 ++++ + GG++ D+ + + + +++L +++ L Sbjct: 139 PEAPAQTPGSPLQILALFAVDRVSIDGGKLSYRDESTPKPTEHTVNNLEFLLTSVHLGES 198 Query: 178 SPLSIDSIKG----SVIAEGTG-----NFDNKRSAFKITANFPAKNKAIS-LKIQLFPLA 227 + + + V +GT D K F + A + L Sbjct: 199 PTVHLGATLQPYNLPVRLDGTFGPLVETLDMKSFTFNLALGKVAIGLKGRAVGGNLDATI 258 Query: 228 YPIII---DLFGNLFWNEKQPIYSGVFSV-------------AGDFSKLLNLELSAKKSR 271 + I DL L + I ++ L L L S Sbjct: 259 NALQIDTADLPLTLPLTKPVQIKDVHLTLHALYPVPPDTPPANQVDLTDLGLTLVMGGSA 318 Query: 272 LSGNFKISDGNVRISRYKLQSILPNSS 298 ++ + G ++ + Sbjct: 319 INVKGTAAKGLANLTAASASINSADLP 345 >gi|300312993|ref|YP_003777085.1| hypothetical protein Hsero_3699 [Herbaspirillum seropedicae SmR1] gi|300075778|gb|ADJ65177.1| exported protein [Herbaspirillum seropedicae SmR1] Length = 1124 Score = 82.6 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 95/302 (31%), Gaps = 30/302 (9%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 R+ Q +G+K+ V + PF ++ DI + + + + ++ L + A Sbjct: 47 VRKLAVEQTQAQLGRKLDVG---AVSFNPFRLALQVSDITLYEADGKTPFLAVQSLLVDA 103 Query: 91 EFLPLLSGEIRVFDMYIDQPHLNFYL---SSKGVSNWF------QRKSTMDMIHNVILEK 141 LL + ++ + +P L G N+ + + L Sbjct: 104 SSASLLCLAPVLDEVRLSKPQLRVQRIDADQGGHYNFSDILERLAAQPKSEGQARFSLAN 163 Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT-GNFDNK 200 + ++ G I D+ + + ++ L + + + S + S GT + + Sbjct: 164 VQLQDGAIHFEDKLTGKTIDIAALQVGLPFISNLPGNIDSFVQPQLSATINGTPLHLKGR 223 Query: 201 RSAFKITANFPAKNKAISLKIQ-------------LFPLAYPIIIDLFGNLFWNEKQPIY 247 F T L + L +DL N ++ Sbjct: 224 SKPFSSTLESAFAIDIERLDLVSYLPFVPMELPVLLQSGHLSTRLDLGFNRQQDKPTITL 283 Query: 248 SGVFSVAGDFSKL--LNLELSAKKSRLS-GNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 +G + L A++ + G F + + +IS+ L+ +S + + Sbjct: 284 AGDVVLDDIAVADRAKAPLLKARQLAVKLGQFDVLAASGQISQVTLEQPQIWASMNGRGE 343 Query: 305 TK 306 Sbjct: 344 IN 345 Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 101/314 (32%), Gaps = 28/314 (8%) Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 V DI + + K L+++ +L+ ++ + ++QP + ++ +G N Sbjct: 287 VVLDDIAVADRAKA-PLLKARQLAVKLGQFDVLAASGQISQVTLEQPQIWASMNGRGEIN 345 Query: 124 WFQRKSTMDMIHN--------------VILEKIHVKGGRIKIIDQES---DQVYFLSDLN 166 W + + ++L++++V+ GR+ D+ + Q LS + Sbjct: 346 WVRALAAPATGKRTAASQAATSAQASAIVLQQLNVRDGRVNWRDEANASPAQNVQLSGIE 405 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 + + + + + G F+ + + K I L L Sbjct: 406 IDAAQLSTAANAQPATLKVTAIENGHGRLGFEGQVAPLKPAVAGKLTLAGIDLAGYRNYL 465 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 + L G L N G + +L +L+L+ + + + + +R+ Sbjct: 466 HRAPVSGLAGKLSGNSTLQWRDGHLKLDDSTVELASLQLT-PEGKSTQPISVESLKLRVQ 524 Query: 287 RYKLQS-----ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341 + + D++ ++ L A+ DL E + Sbjct: 525 NVTDTFDQAMPLTLQARLDKNGSADITGQIAPHL----KNADLDLDLRELPIAPVQGYFT 580 Query: 342 KNDDLKKDDIQYSV 355 ++ + S Sbjct: 581 DILNVSISNGALSA 594 >gi|94969832|ref|YP_591880.1| hypothetical protein Acid345_2805 [Candidatus Koribacter versatilis Ellin345] gi|94551882|gb|ABF41806.1| protein of unknown function DUF490 [Candidatus Koribacter versatilis Ellin345] Length = 1317 Score = 82.6 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 55/405 (13%), Positives = 125/405 (30%), Gaps = 36/405 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDF----ERQATLIVGKKIAVKGGIKIHI 58 + V G + S+VL+ + + F + +A+ + ++ ++ K+++ Sbjct: 6 KVVGWGAVAVLSLVLLAIVGTAVLLHSEKFHRYVIVRVQTEASDSLNAQVTLR-DFKLNL 64 Query: 59 LPFPSVFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 ++ D+ + + + + ++ + + +L + + D+ +D P ++ Y+ Sbjct: 65 -STLTLDLYDLNLHSSESDPNAPLLHVDHAGASVKIISMLKRQWNLSDIQVDHPVIHLYV 123 Query: 117 SSKGVSNWFQRK----STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 G +N + K ++ I ++ + + + G I D+ S+ L D+ Q S Sbjct: 124 DKNGNNNLPKPKTSNGNSNTNIFDLAIRRAALTNGEIYYNDRRSELDANLLDVTFQSSYD 183 Query: 173 ---------FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKI-TANFPAKNKAISLKIQ 222 L V + + +FD R+ K+ NF + L Sbjct: 184 AANGGRYYGSLGYKQGNLHFGDYSPVQHDLSASFDADRNGIKLDPVNFAIGESKVLLHAT 243 Query: 223 LFPLAYP-------IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA-KKSRLSG 274 + P +D + I G +AG+ + A + + G Sbjct: 244 MQNYTQPVVTAAYDASLDATQFRKILKNASIPVGTVRLAGNAIYHQDPNKPALQTVNVDG 303 Query: 275 NFKISDGNVRISRYKLQSILPNSSTDE-DNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 V + + D ++S S G E TD Sbjct: 304 TIASRSLLVNQPGLRADIRAIDGHYKIADGNAELS-----SFRASIFGGEINAIAKVTDL 358 Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378 K + + + + N S D Sbjct: 359 AGAGNGKLHAVAKNISAADLKTLANAAAIKNVNVDGKLNASADAT 403 >gi|163849772|ref|YP_001637815.1| hypothetical protein Mext_0320 [Methylobacterium extorquens PA1] gi|163661377|gb|ABY28744.1| hypothetical protein Mext_0320 [Methylobacterium extorquens PA1] Length = 1175 Score = 82.6 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 109/322 (33%), Gaps = 31/322 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R L L +VLV A VP FIDW+ R +R + +G +G I + +LP Sbjct: 1 MRDSLTALAGAVVLVLVAALAVPPFIDWSAHRALIDRTLSDSLGAGARSEGAIDLRLLPS 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P + +R+ ++ + + PLL GE+R +++ L +S + + Sbjct: 61 PHLRLARLRLGAEDG--PALDAQAVDAEIALAPLLKGEVRFVQTSVERAGLTLPVSDEAL 118 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + ++ ++++ + ++ + + + NL++ A Sbjct: 119 LLPREPQTLRRD---IVIDDLRIRRLTVATLRTGEAPQEQFAAENLRLRAP--------- 166 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 ++ G +AEGT F + + + ++SLK+ P ++L + Sbjct: 167 --ALAGPWLAEGTAKGS----PFHLATSVAGSDGSLSLKLTGGGDTMP-RLELDARITLK 219 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS----------RLSGNFKISDGNVRISRYKLQ 291 + L+ L+ F V+ +L+ Sbjct: 220 PEDAPGEDRVRRGLVPEAEGTARLTVGPPVQPAGAVLPLTLAAKFASRGPLVQAKTVELE 279 Query: 292 SILPNSSTDEDNKTKVSQDEEN 313 + ++ E Sbjct: 280 LDPGGKAARLSGNGRLDLREAR 301 >gi|333029884|ref|ZP_08457945.1| putative outer membrane protein [Bacteroides coprosuis DSM 18011] gi|332740481|gb|EGJ70963.1| putative outer membrane protein [Bacteroides coprosuis DSM 18011] Length = 844 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 114/344 (33%), Gaps = 34/344 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI--- 58 +++ G + +++LV ++P +++A ++ + + I + Sbjct: 1 MKKAFKITGIIVAILLVIMISIPFLFS-GKIESLVKKEANKMLNAEFDFA-SLDISLFKN 58 Query: 59 LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFY 115 P S+ KD + + +K + L+ + L + + +++ L Sbjct: 59 FPKASLTLKDFWVKGINEFENDTLAKAKELTATVNVMSLFKDSGYEIGQIILNEGKLKAV 118 Query: 116 LSSKGVSNWFQRKSTM-------------DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 + GV NW K + ++ ++KI VK + +Q+ +Q + Sbjct: 119 VLPTGVENWNILKEEDTKEDVQEELEDATEGDFSLKVDKISVKNFSLIYDNQKDNQFALI 178 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 +L+L + + + L+I+ ++ G K N A + Sbjct: 179 DNLDLNLKGDLSSKKTTLAIEGNTPNLTFRSGGIPLINSMHLKAKINLDADLSNKVFTLA 238 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 + N + G ++ + + ++L+L+ + + Sbjct: 239 KN------------EIQLNAIKTNLDGWVAMKENDAIEMDLKLNTSEVGFKEVLSLIPA- 285 Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + + +K ++ K + D + + + ++M Sbjct: 286 IYANDFKNIQTDGTATLIAYAKGTMQGDILPSFDITLDVKDAMF 329 >gi|332308460|ref|YP_004436311.1| hypothetical protein Glaag_4119 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175789|gb|AEE25043.1| hypothetical protein Glaag_4119 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 1301 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 54/380 (14%), Positives = 119/380 (31%), Gaps = 18/380 (4%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI- 58 +++++ L +V V V + + + E+ G +I + G I Sbjct: 11 IIKKLWSCAAILLVLVAVAISVVRYILPYMDGQKHRIEQWVEGQYGVEINI-GNITAQWK 69 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS 117 P++ +D+++ Q IE + +F +L+ ++R ++ +L LS Sbjct: 70 GAGPAIVLEDLQLVQNAQSPLSLDIEKTVIELDFWDSVLARQVRSQRFDLNGLNLKVDLS 129 Query: 118 SKGVSNWFQRKSTMDMIHNV-ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 + + L+ V + +I QV ++ L R Sbjct: 130 LMNQEGSDFPVVSALKQLFLEQLQSFSVSNSQFEITTSHDQQVVLVNQLLWSNKGRHHQG 189 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 + L ++ + + A T + + + T A +S I + +++ G Sbjct: 190 VGELQVEELASN-SASFTLDLRGDKDSLNGTFYAKAHEVDLSPWINQWLATRYELVESRG 248 Query: 237 NLFWNEKQPIYSG---VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN--VRISRYKLQ 291 N +A + K + L G + Y L Sbjct: 249 NFVVWASIEDGDIKNAQLDLADSRFVWQKEDAQIKAAILGGQLNAEPSKEGWIFNLYDLG 308 Query: 292 SILPNSSTD------EDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 + S ++K +V + ++ S LN D F + + + Sbjct: 309 LQANDRSQTSNWYGEINDKGQVHIQNADRVDLSAITPLLPLALNPVD-FNVLQGLSPSAT 367 Query: 346 LKKDDIQYSVNKKEEKDNSH 365 L K ++Q+ + N Sbjct: 368 LNKLNVQFDKTDTYAQVNVS 387 >gi|33596497|ref|NP_884140.1| hypothetical protein BPP1876 [Bordetella parapertussis 12822] gi|33566266|emb|CAE37177.1| conserved hypothetical protein [Bordetella parapertussis] Length = 1219 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 39/390 (10%), Positives = 109/390 (27%), Gaps = 41/390 (10%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI 58 +LR + + ++ V+ V + ++ +R E+ A+ +G ++A+ + Sbjct: 23 ILRLLFWSVFAIYGVLAVAFLGLRYWVLPRADQWRPQIEQYASQALGSRVAID-SLSADW 81 Query: 59 -LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 P + +RI + ++ + +L + + ID L Sbjct: 82 SGLNPRLNLSGVRIYD-HQADPVLSLPSVAAVLGWRSVLKLSPTLQSLRIDGADLLVRRD 140 Query: 118 SKGVSNWFQRKSTMDMI------------HNVILEKIHVKGGRIKIIDQE-SDQVYFLSD 164 S + + ++ + G ++ D+ L Sbjct: 141 SADRLWVAGQSIDLAAPSDHGFTESPALRWLARQRELALHGVTLRWQDEARQAPELRLDG 200 Query: 165 LNLQISARFLNIISPLSID---------SIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215 L+L + L+ L + S++G + + +++ ++ Sbjct: 201 LDLLMRNGVLSHRFSLRVRPPAQLAAKVSLRGELNRSLFARDGSNPASWSGQLYAEVQDA 260 Query: 216 -AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL-----LNLELSAKK 269 + + A L + + A ++ + + + Sbjct: 261 EPAAWAPWVAIPAAQGRYAARAWLQLDHGKFT-DLTMDAALRGLNWRAGQSASVSVDSAQ 319 Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL---NFSENGAESMH 326 RL G ++ S L + + + + + A+ Sbjct: 320 WRLQG---APGDLLQFSDLPLARSADGAGVSVTGQADGLWLNLPEIFEHPLALDRAQLDA 376 Query: 327 DLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356 L E + + L D+ +++ Sbjct: 377 TLTEPAG-QPLTLNLRRLQLANPDLDATLH 405 >gi|172059719|ref|YP_001807371.1| hypothetical protein BamMC406_0659 [Burkholderia ambifaria MC40-6] gi|171992236|gb|ACB63155.1| conserved hypothetical protein [Burkholderia ambifaria MC40-6] Length = 1398 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 97/331 (29%), Gaps = 37/331 (11%) Query: 2 LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55 LRRV + V + + +FR ER + + ++++ G + Sbjct: 24 LRRVFRVTLAVGIGTYFVASASFLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GRLS 82 Query: 56 IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 H P V D+ I ++ + + ++ LL + + +D P L Sbjct: 83 PHWSGMQPGVEVTDLTIRGRDGRI-ALSVPHATAALSWMSLLRLSPALSSLIVDHPDLVV 141 Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166 ++ G + + + E I ++ G ++ D + D LS + Sbjct: 142 ARAADGSLSVAGVGVATTHGGNDTFSTWLLKQEAIVLRNGTLRWRDAQHDAPELALSGIR 201 Query: 167 L----QISARFLNIISPLSIDSIKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAISL 219 L + +P + + G + T + + L Sbjct: 202 LAVLNHGRVHKAALQAPANGTLLLGPLDFRARFRHKPLQPIGKPTNWTGDAYLSTGPVDL 261 Query: 220 KIQLFPLAYPI-----IIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270 + L P+ ID + + +G + G L L Sbjct: 262 QTLGRYLDIPLTIHAGRIDNAIWATFEDGHLRSAGG-DLQGADVVLRVRPTQPRLDVPTV 320 Query: 271 RLSGNFKISDGN---VRISRYKLQSILPNSS 298 + ++ G + ++R+ + P Sbjct: 321 GFGWDMALNAGRDYTLHLTRFNAELGQPPLP 351 >gi|258542556|ref|YP_003187989.1| hypothetical protein APA01_14690 [Acetobacter pasteurianus IFO 3283-01] gi|256633634|dbj|BAH99609.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01] gi|256636693|dbj|BAI02662.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03] gi|256639746|dbj|BAI05708.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07] gi|256642802|dbj|BAI08757.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22] gi|256645857|dbj|BAI11805.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26] gi|256648910|dbj|BAI14851.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32] gi|256651897|dbj|BAI17831.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654954|dbj|BAI20881.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12] Length = 624 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 84/302 (27%), Gaps = 19/302 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R + G + +V V A + + + + + +G+K ++ + + + + Sbjct: 1 MPRWVWLAGSVLAVSAVAAGVLVAGLPHYNLAHIASDKLSASLGRKTQIE-ALHVRLGRW 59 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 +V ++ + GS ++ L + L +G ++ D+ ID F + + Sbjct: 60 VTVDMDNLHLANIPQGSRADMITLKHLHAQILLSSLFNGHMQARDVKIDGFSGLFERTPE 119 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI---IDQESDQVYFLSDLNLQISARFLNI 176 NW K G+I D + S Sbjct: 120 REPNWRFGKKASSAPSKPKE-----TSGKIWFPGLRDAAITDSEVIYRSAHGHSYVTGLK 174 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP--AKNKAISLKIQLFPLAYPIIIDL 234 L S ++ + G ++ + + + + + + L Sbjct: 175 AVALHSVSDSTPLLMDVNGAYNGTPVTLQANMQPINVLRQAGKPYGTDIHAASGDLSLHL 234 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNL------ELSAKKSRLSGNFKISDGNVRISRY 288 G + + S+ + + LSG+F + Sbjct: 235 NGTMTDLFDFDGIDAKLDLQTATSRQIMAFAGEADSKITQPVTLSGHFTHKGDVWHLDHT 294 Query: 289 KL 290 Sbjct: 295 TG 296 >gi|307728524|ref|YP_003905748.1| hypothetical protein BC1003_0454 [Burkholderia sp. CCGE1003] gi|307583059|gb|ADN56457.1| hypothetical protein BC1003_0454 [Burkholderia sp. CCGE1003] Length = 1398 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 104/326 (31%), Gaps = 34/326 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPL------FIDWTDFREDFERQATLIVGKKIAVKGGIK 55 LRR L + L V+ A + L FR E + + + ++ G + Sbjct: 27 LRRTLHVVLALALVLYFIAAGLFLGLRYGVLPRADAFRPRIEATVSDKLHAQFSI-GKLA 85 Query: 56 IHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 H F P + ++ I ++ I + + L + + +DQP + Sbjct: 86 PHWSGFQPGLDITNLVIRDRDG-KPALTIPHATATLSWRSLWQFRPVLSSLIVDQPDVLI 144 Query: 115 YLSSKGVSNWFQRK-------STMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166 S GV + + + + I V+GG ++ D + D L D+ Sbjct: 145 ARGSDGVLSVAGVPVPTRHSGNDTLSTWLMRQQAIVVRGGVLRWRDAQRDAPELALRDIR 204 Query: 167 LQISARFLNI----ISPLSIDSIKGSVIA-----EGTGNFDNKRSAFKITA---NFPAKN 214 + I + +P ++G + K +K A P Sbjct: 205 IAILNDGYDHRLALQAPPDGHLLRGPLDFRTHFRHAPLAAIGKPVNWKGQAYVSTGPVDL 264 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQ-PIYSGVFSVAGDFSKLLNLELSAKKSRLS 273 ++ I+ + ID + + + + SG S A ++ + S Sbjct: 265 PTLARYIKFPIETFAGRIDNAIWVDFADGRMTSASGQMSGADVALRVRPTQPKLLLPVAS 324 Query: 274 GNFKISDG----NVRISRYKLQSILP 295 +++ ++++ + + P Sbjct: 325 FGWRVEGQQGDYKLQLNDLRAELGQP 350 >gi|325282028|ref|YP_004254570.1| AsmA family protein [Odoribacter splanchnicus DSM 20712] gi|324313837|gb|ADY34390.1| AsmA family protein [Odoribacter splanchnicus DSM 20712] Length = 842 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 60/393 (15%), Positives = 131/393 (33%), Gaps = 38/393 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI--- 58 +++V I LG L VV+ +P F D + E+Q+ + K+ + G + + + Sbjct: 1 MKKVFITLGVLILVVITALMVIPTFF-KGDILQIIEKQSAKYINAKLKI-GDMNLSMFIS 58 Query: 59 LPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNFY 115 P +V K++ I ++ G I L++G E+ V + + + Sbjct: 59 FPNLNVALKEVMITGQDEFAGDTVVYIPLFEASVNLKSLIAGDELIVNQLLLKNCRIAPT 118 Query: 116 LSSKGVSNWF----------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159 ++S+G +NW + + L I ++ I D + Sbjct: 119 VNSEGKANWDILLSSGSQTSATTETPPDEPKGKAERGLRLNDIAIENLFITYNDFQHSTY 178 Query: 160 YFLSDLNLQISARF--LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217 ++D++L+++ F N + + + S + + + ++ K Sbjct: 179 ASIADIDLKLNGNFSETNTLIDIFLALQNISYRHQNSVWINKTDLKWQAVIGANLKEMTF 238 Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNF 276 ++ + + +DL GN+ E + + F+ LL + + + G Sbjct: 239 DIQ-KNDLALNDLKLDLTGNIGVGEDKYKLDLQLNAPDTKFASLLAMVPKTLQHYIEGLE 297 Query: 277 KISDGNVRI---SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 D + + Y + + N V E + DLN + Sbjct: 298 TSGDFKLNVTAKGEYYADHLPALQANLLVNNASVKYPELPE-----AIRQINIDLNVS-- 350 Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHD 366 + +LKK + N N + Sbjct: 351 NPGGPVDSTQLNLKKLSFDIAGNPFSMYLNISN 383 >gi|115350688|ref|YP_772527.1| hypothetical protein Bamb_0634 [Burkholderia ambifaria AMMD] gi|115280676|gb|ABI86193.1| conserved hypothetical protein [Burkholderia ambifaria AMMD] Length = 1398 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 97/331 (29%), Gaps = 37/331 (11%) Query: 2 LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55 LRRV + V + + +FR ER + + ++++ G + Sbjct: 24 LRRVFRVTLAVGIGTYFVASASFLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GRLS 82 Query: 56 IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 H P V ++ I ++ + + ++ LL + + +D P L Sbjct: 83 PHWSGMQPGVEVTNLTIRGRDGRI-ALSVPHATAALSWMSLLRLSPALSSLIVDHPDLVV 141 Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166 ++ G + + + E I ++ G ++ D + D LS + Sbjct: 142 ARAADGSLSVAGVGVATTHGGNDTFSTWLLKQEAIVLRNGTLRWRDAQHDAPELALSGIR 201 Query: 167 L----QISARFLNIISPLSIDSIKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAISL 219 L + +P + + G + T + + L Sbjct: 202 LAVLNHGRVHKAALQAPANGTLLLGPLDFRARFRHKPLQPIGKPTNWTGDAYLSTGPVDL 261 Query: 220 KIQLFPLAYPI-----IIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270 + L P+ ID + + +G + G L L Sbjct: 262 QTLGRYLDIPLTIHAGRIDNAIWATFEDGHLRSAGG-DLQGADVVLRVRPTQPRLDVPTV 320 Query: 271 RLSGNFKISDGN---VRISRYKLQSILPNSS 298 + ++ G + ++R+ + P Sbjct: 321 GFGWDMALNAGRDYTLHLTRFNAELGQPPLP 351 >gi|293604495|ref|ZP_06686900.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292817076|gb|EFF76152.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 1219 Score = 81.9 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 44/363 (12%), Positives = 107/363 (29%), Gaps = 26/363 (7%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI 58 MLR + ++ VV VG V ++ ++R E A+ +G ++ + G IK + Sbjct: 1 MLRCLFWAALIVYGVVAVGFLGVRYWVLPRVGEWRPQIEAYASDALGARVTI-GDIKANW 59 Query: 59 -LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 P + +++ + + + +S + +L+ R+ + + +P L Sbjct: 60 QGLNPRLDLTSVQVVD-DSETPVLSLPSVSAVLAWRSVLTLSPRLVRLQLHKPELTLRRD 118 Query: 118 SKGVSNWFQRK------------STMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSD 164 + + + ++ V I D L+ Sbjct: 119 PANHLWVAGQDIDLNASDHRSDLNHPALRWLARQRELSVDDATIIWQDDLRRAPALPLTG 178 Query: 165 LNLQISARFLNIISPLSIDSIKGSVI-AEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 ++ + L+ L + E G F+ A + + + + Sbjct: 179 VDFLMRNGSLSHRFVLRASAGDALARKVELRGEFNRSLFAANSSNPANWSGQFYTELDDV 238 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 P A+ I G + + L +++ + + + Sbjct: 239 EPQAWAPWIPAPG----ISGRIAARAWLQLERGKFTELTSDVALRGVDWAADHDGPSVRG 294 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343 ++++LQ + + ED S ++ L F+E Sbjct: 295 ASAQFRLQGLPGDFVQIEDVPLARSPG-APDVSVKGAAQHLRVTL--PGVFKEPTLVAHE 351 Query: 344 DDL 346 + Sbjct: 352 LSV 354 >gi|170700484|ref|ZP_02891489.1| conserved hypothetical protein [Burkholderia ambifaria IOP40-10] gi|170134608|gb|EDT02931.1| conserved hypothetical protein [Burkholderia ambifaria IOP40-10] Length = 1398 Score = 81.9 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 97/331 (29%), Gaps = 37/331 (11%) Query: 2 LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55 LRRV + V + + +FR ER + + ++++ G + Sbjct: 24 LRRVFRVTLAVGIGTYFVASASFLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GRLS 82 Query: 56 IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 H P V ++ I ++ + + ++ LL + + +D P L Sbjct: 83 PHWSGMQPGVEVTNLTIRGRDGRI-ALSVPHATAALSWMSLLRLSPALSSLIVDHPDLVV 141 Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166 ++ G + + + E I ++ G ++ D + D LS + Sbjct: 142 ARAADGSLSVAGVGVATTHGGNDTFGTWLLKQEAIVLRNGTLRWRDAQHDAPELALSGIR 201 Query: 167 L----QISARFLNIISPLSIDSIKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAISL 219 L + +P + + G + T + + L Sbjct: 202 LAVLNHGRVHKAALQAPANGTLLLGPLDFRARFRHKPLQPIGKPTNWTGDAYLSTGPVDL 261 Query: 220 KIQLFPLAYPI-----IIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270 + L P+ ID + + +G + G L L Sbjct: 262 QTLGRYLDIPLTIHAGRIDNAIWATFQDGHLRSAGG-DLQGADVVLRVRPTQPRLDVPAV 320 Query: 271 RLSGNFKISDGN---VRISRYKLQSILPNSS 298 + ++ G + ++R+ + P Sbjct: 321 GFGWDMALNAGRDYTLHLTRFNAELGQPPLP 351 >gi|225873639|ref|YP_002755098.1| hypothetical protein ACP_2040 [Acidobacterium capsulatum ATCC 51196] gi|225792269|gb|ACO32359.1| conserved hypothetical protein [Acidobacterium capsulatum ATCC 51196] Length = 931 Score = 81.9 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 91/327 (27%), Gaps = 35/327 (10%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE--DGSFES 81 P +I +R + +G+ + ++ + + +LP P + ++ +D+ Sbjct: 46 PPYIGLNHYRRQMVASVSASLGRTVHIQ-SMHLRLLPTPGIVMENFVVDEDPAFGNEPAL 104 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-----------QRKST 130 + L I V + +D P +N + G ++ + Sbjct: 105 TAPTVVATLRVSSLWRRHIEVSSISMDTPSVNLVRNPNGNWSFGSILLQAARSTNAPTTQ 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI------SARFLNIISPLSID- 183 I + G RI + L D +L + R P+ D Sbjct: 165 RYAGGAPRFPYIEMSGARINFKQGLYKLPFSLFDADLALWQQSANRWRLRIHAQPVRTDL 224 Query: 184 ----SIKGSVIAEG----TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 + G++ +G T N + + +A L + + L Sbjct: 225 DLDLADTGTLRIDGWLGRTTNLHSLPVHLDGSWQDAQLGQATRLLFGAD-EGWRGQLHLS 283 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 G+L + + S L N + + ++R S L +LP Sbjct: 284 GSLRGTLSDLQARWQIHLDNPHRIEFTPDSS---PSLDANCQATYHSLRHSLDGLLCLLP 340 Query: 296 NSS--TDEDNKTKVSQDEENLLNFSEN 320 + L N Sbjct: 341 TAPGHLLLTGAIPDLLHPGPSLQLEVN 367 >gi|297538859|ref|YP_003674628.1| hypothetical protein M301_1671 [Methylotenera sp. 301] gi|297258206|gb|ADI30051.1| conserved hypothetical protein [Methylotenera sp. 301] Length = 1315 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 48/401 (11%), Positives = 114/401 (28%), Gaps = 40/401 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-L 59 R L+ + + L+ A + ++ +++ AT +K+ + G IK Sbjct: 11 RIALLLATIIIVIFLMAALVIQFYVFPSINQYKDKIANYATQAAHQKVVI-GNIKAGWQG 69 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + +I + E+ ++ + +L + E + + I P L + Sbjct: 70 INPHLSLSNIDLYDTEN-RPALALKNTDISFSWLSIPLLEPHLANFTIRSPELTIRRNLN 128 Query: 120 GVSNWF-----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARF 173 G + + ++ V ++ +D+ L LNLQ+ + Sbjct: 129 GDIFVAGISMQGQSKPDLPNWLLRQSQLDVLNAKVVWLDEMRGAPALSLEKLNLQVVSPP 188 Query: 174 LNIISPL----------SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA-ISLKIQ 222 + S + A GN ++ S + + KN ++ K Sbjct: 189 WKSFIKNHRITLSTLVSAGTSEPIMINANVYGNDISRLSEWHGSIETKLKNANVVAFKPW 248 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYS--------GVFSVAGDFSKLLNLELSAKKSRLSG 274 IDL + + ++ ++ L ++L G Sbjct: 249 FDYSPITQPIDLQSGVGSTDTTIEFAKSQVQSVTSNVALDNVQLLLKANTEPLILNKLVG 308 Query: 275 NFKI----SDGNVRISRYKLQS-ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 ++ + +S L + K Q E F+ Sbjct: 309 ELDWKSSATEQSFNVSHLTLNTSNGLTLKDAAGGYAKTQQGNE---KFNLKLTHIDLAFI 365 Query: 330 ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQ 370 + + + K + + + + K++ Sbjct: 366 KAYLVQL--PLPADIAQKINSLSPTGKLDNLLLSWEGKQSL 404 >gi|330827857|ref|YP_004390809.1| AsmA family [Aeromonas veronii B565] gi|328802993|gb|AEB48192.1| AsmA family [Aeromonas veronii B565] Length = 705 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 42/366 (11%), Positives = 106/366 (28%), Gaps = 39/366 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR +L FL V V D + + G + + G + + L Sbjct: 5 LRGLLYTFAFLLLFVWVALG----LFDAERAKGPIASWISQQTGVPVTI-GRLVFNPLHP 59 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 ++ + +R ++ + + E + LS ++R+ + + +P + L ++ Sbjct: 60 YTLLAEQVRYGDA------VSLDKIYLEIESIDWLSRDVRIAHLDLIRPAIKLPLPNQ-- 111 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 I + ++++ ++ + + LSD L R L+ Sbjct: 112 --LPSLPVHSLTISDSTIDRLSLESPELTLR----GLNATLSDWELIDPKRQPQANLSLN 165 Query: 182 IDSIKGS----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII-DLFG 236 I ++ G + + + + + L A + + DL Sbjct: 166 IGQLETPQFTFARLNLQGQLEGEVLRTD-KLVTNLFDGLLETGMVLDWPARTLQLHDLKA 224 Query: 237 -NLFWNEKQPIYSG---VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + G F + L+ + ++ ++ + +++ + Q+ Sbjct: 225 RGMRVELGDLTQQGFPQRFPLQSVSLDRGQLD-GVSLNDINQELSFNNFSGQLTAFNWQA 283 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN----KNDDLKK 348 + + F + + E + K N +L Sbjct: 284 GN-----QPTGYLSGTLGDMGRGLFQLEEIKGKLAFSPQQIDGELQGKAYEGEFNVELSL 338 Query: 349 DDIQYS 354 D Q Sbjct: 339 DTQQQK 344 >gi|187922734|ref|YP_001894376.1| hypothetical protein Bphyt_0728 [Burkholderia phytofirmans PsJN] gi|187713928|gb|ACD15152.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN] Length = 1428 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 101/321 (31%), Gaps = 24/321 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTV------PLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55 LRR+L + L V+ A + + FR E + + + + G + Sbjct: 59 LRRILHVVLALALVLYFIAMGLFLGLRYVVLPRVDSFRPRIEAAISEKLHAQFTI-GKLA 117 Query: 56 IHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 H F P + ++ I + + I + + L + + +DQP + Sbjct: 118 PHWSSFQPGLDVTNLIIRDHDGKA-ALTIPHATATLSWRSLWQFRPALSSLIVDQPDVLV 176 Query: 115 YLSSKGVSNWFQRK-------STMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166 SS GV + + + + I V+GG ++ D + D L D+ Sbjct: 177 SRSSDGVLSVAGVPVPTRHSGNDTLSTWLLRQQAIVVRGGALRWRDAQHDAPELALRDIR 236 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 + I + L + + G +F ++A N + + P+ Sbjct: 237 IAILNDGYDHRLALQAPADGQ--VLHGPLDFRTHFKHAPLSAIGKPINWTGQVYVSTGPV 294 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 P + + N + ++ + + ++ + + + + Sbjct: 295 DLPTLAR-YVNFPIETFAGRIDNAIWIDFAEGRMKSAGGQLAGTDVALRVRPTQPKLLVP 353 Query: 287 ----RYKLQSILPNSSTDEDN 303 ++L++ + N Sbjct: 354 VANFSWRLEAAEGDYKLQLTN 374 >gi|326388699|ref|ZP_08210292.1| hypothetical protein Y88_3100 [Novosphingobium nitrogenifigens DSM 19370] gi|326206950|gb|EGD57774.1| hypothetical protein Y88_3100 [Novosphingobium nitrogenifigens DSM 19370] Length = 1036 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 32/316 (10%), Positives = 83/316 (26%), Gaps = 19/316 (6%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR + ++++G ++ R + K++A+ +I P Sbjct: 5 RRKWWIAPAVLILLVLGYLAAGYWLVPRVLRSQAVGWTHDRLHKRLALG---EIRFDP-L 60 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 I + + L ++ L + + ++ +D+P ++ + G Sbjct: 61 RFTLDIDSIAVDDPTHPMVALGHLHLKMAPLSVFEKAWHLPEVGLDRPAVDAIVRRDGSL 120 Query: 123 NWF----QRKSTMDMIHNVILEKIHVKGGRIKIID-------QESDQVYFLSDLNLQISA 171 N + ++++ + GG++ D + + + +L+ SA Sbjct: 121 NLAELIPPSTGEATKPLALRIDRLTIAGGQVAFADLSLPLQPRSRLEPVTFTLKDLRTSA 180 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKIQLFPLAYPI 230 + + G + S + L L + Sbjct: 181 SGSGDFTFAAASDAGERFDWRGRLSLTPLGSTGSFAVADLRADTLYRYLSPWLPVIPTSG 240 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 G VA + L+ G+ ++ R L Sbjct: 241 KASAAGRYAVRYAGGATRLGVDVARLGLADVGLDGGTL---FRGSAHAGKMDLGHGRIDL 297 Query: 291 QSILPNSSTDEDNKTK 306 ++ + Sbjct: 298 AIGSDHALGSLTGLAQ 313 >gi|78065305|ref|YP_368074.1| hypothetical protein Bcep18194_A3829 [Burkholderia sp. 383] gi|77966050|gb|ABB07430.1| conserved hypothetical protein [Burkholderia sp. 383] Length = 1399 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 42/331 (12%), Positives = 102/331 (30%), Gaps = 37/331 (11%) Query: 2 LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55 LRRV + V + + +FR ER + + ++++ G + Sbjct: 24 LRRVFRVTLAVGIGTYFVASGALLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GKLS 82 Query: 56 IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 + P V ++ I + + + ++ LL + + +DQP L Sbjct: 83 PNWSGMQPGVELTNLTIRGHDGKV-ALSVPHATAALSWMSLLRLSPALSSLIVDQPDLVV 141 Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166 ++ G + + + E I ++GG ++ D + D LS + Sbjct: 142 ARAADGSLSIAGVGVATTHGGNDTFGTWLLKQEAIVLRGGTLRWRDAQHDAPELVLSGIR 201 Query: 167 LQISAR----FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT--------ANFPAKN 214 L + + +P + + G + K + + P Sbjct: 202 LAVLNNGRVHKAALQAPANGTLLLGPLDFRARFRHKPLAPVGKPSNWAGDAYLSTGPVDL 261 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270 + ++ + + + ID +++ +G + G L L Sbjct: 262 QTLARYLDVPLTIHAGRIDNAIWATFSDGHLHSAGG-DLQGADVALRVRPTQPRLDVPTV 320 Query: 271 RLSGNFKISDG---NVRISRYKLQSILPNSS 298 + ++ G + ++R+ + P Sbjct: 321 GFGWDMQLDAGHDYTLHLTRFNAELGQPPLP 351 >gi|254505296|ref|ZP_05117447.1| AsmA family [Labrenzia alexandrii DFL-11] gi|222441367|gb|EEE48046.1| AsmA family [Labrenzia alexandrii DFL-11] Length = 896 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 46/394 (11%), Positives = 122/394 (30%), Gaps = 34/394 (8%) Query: 2 LRRVL---IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQA-TLIVGKKIAVKGGIKIH 57 L+R L + + F+ +++ P + R A T + +++ + G + + Sbjct: 6 LKRTLGAGLLVFFISIMLVAAVLYTPF---ASGLRTAVAAYALTEALERQVEIGGDVTVG 62 Query: 58 ILPFPSVFFKDIRIDQKEDG---SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 + P DIR+ +++ + I+ + ++ LLSG+ + + + + Sbjct: 63 LGPLIGFSASDIRLARRDPAANETPWHAIDHVDVKIPLHALLSGDPKPSAILLRGVTVYL 122 Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + + L R+ + D S + L D+ L + Sbjct: 123 A---------GELPENAEDDAVSNLGNFAGLPTRL-LTDPMS-EDLVLEDIVLIDPDKGN 171 Query: 175 NIISPL-------SIDSIKGSVIAEGTGNFDNKRSAFKITANFP--AKNKAISLKIQLFP 225 + + + ++ E D+ + P + + + + L Sbjct: 172 GWGYEIVVDKLSSQASASRSDLLVEAKLRVDDTPATLLAVFTNPHNSADGSKTGPFDLQI 231 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV-R 284 + G+L + + V+ L L ++ + G ++ + Sbjct: 232 GLPGGELRTSGDLDLRQPIAAVAAKLEVSISSLGNLLDLLDLRRV-IEGTASMTASHAGS 290 Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344 I + + + +N VS S GA+ ++ ++ Sbjct: 291 IDALAMTELQLD--LQLENIASVSISGAVQNMVSGEGADLEFAVDVETGRSQDIAPQSVF 348 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378 + + ++ E+ D Q N + ++ Sbjct: 349 QVDVERFSGAIKGDRERFFIADLTVQTNLASGEL 382 >gi|319942522|ref|ZP_08016832.1| hypothetical protein HMPREF9464_02051 [Sutterella wadsworthensis 3_1_45B] gi|319803925|gb|EFW00843.1| hypothetical protein HMPREF9464_02051 [Sutterella wadsworthensis 3_1_45B] Length = 854 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 29/246 (11%), Positives = 72/246 (29%), Gaps = 28/246 (11%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + +VL +V + R E+ + ++ + + + + P+ Sbjct: 12 MAKVLTFTACAAAVGVALYAAAGYVGVPYAVRTVIEKNVSELLNRTVTLD---DVRFNPW 68 Query: 62 P-SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + + I + E + L + A L + ++ ID +N ++ K Sbjct: 69 TWAFELRGLTIPE-EGSDPLLSLGLLRIDASSQTLFKLAPVLDEITIDGLKVNAVVNEKN 127 Query: 121 VSNWF-----------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 S+ + L I V ++ D+ L+ Sbjct: 128 RRELEKLLGGNDADKATQTAAKSADSSDAGLPQFALYNITVANSSLRYQDKSQGIDESLT 187 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 DL++++ + S+ V + + T K+ L +++ Sbjct: 188 DLSVKLPFVSTMESARESL------VTPALSLKLNGSAIEASGTTKPFGKSLEAQLNLKV 241 Query: 224 FPLAYP 229 L Sbjct: 242 QRLDAA 247 Score = 38.7 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 26/221 (11%), Positives = 62/221 (28%), Gaps = 29/221 (13%) Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF----- 125 KE + + ++ +++ S +V + + QP ++ G++ Sbjct: 511 FALKEGKTTLASVKSAAVKLSEFSTASRTAKVESIAVVQPTAYAVMTKSGLNLSQLTVET 570 Query: 126 -------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLNLQIS 170 + + + N L + V G +K D+ + +N + Sbjct: 571 KPSTAKKTSKEETAKTNAAEPAWNWSLGQATVTNGSLKYRDESISPAASVEIPKINAALK 630 Query: 171 ARF----LNIISPLSIDSIKGSVIAEGTGNFDNKRSAF---KITANFPAKNKAISLKIQL 223 S D GS+ A G + + + + L Sbjct: 631 NVSSKSGTKSSVDFSADLGGGSLTAAGNFVLAPLSADIGVKGANIGLKSFSNLMQGYAGL 690 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIY--SGVFSVAGDFSKLLN 262 + + D + ++Q ++ G S+A Sbjct: 691 GAKSGTLEADGRATVRTQKEQNVFGWKGNASLASLDLTNAK 731 >gi|325105166|ref|YP_004274820.1| hypothetical protein Pedsa_2453 [Pedobacter saltans DSM 12145] gi|324974014|gb|ADY52998.1| hypothetical protein Pedsa_2453 [Pedobacter saltans DSM 12145] Length = 1045 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 47/383 (12%), Positives = 115/383 (30%), Gaps = 34/383 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58 +++R IGL + +++ V I+ A + ++ I + Sbjct: 20 IVKRFFIGLAIILALLAVLPLIFSKTIN-----NKISAWANENLDAEVKFS-NIGLSFFS 73 Query: 59 -LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 P+ +V DI + K + +S+ + + + YI+ +N Sbjct: 74 HFPYLTVNVYDIDLKGSAPFKNETLLKAKEVSLGINLASVFEETLAINKFYIEDGFINVQ 133 Query: 116 LSSKGVSNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 S G++N+ + D ++ +E I +K + D+ + N Sbjct: 134 TDSLGIANYNILKSDSTKKETPQKEDSETSLRIELIKIKNTHLIYNDRSLPVLIDARGFN 193 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 + + + L+ + S+ G ++S + L Sbjct: 194 YTGKGKLSDAVFALTTHAQIDSLTFSYDGQEYLTNKNIDAKLLTHVNTNSLSFVFEKNEL 253 Query: 227 A-YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 + I G + Y F++ SKL +L + L + Sbjct: 254 KINKLPITFTGKFAFINNG--YDLDFNIVSLQSKLEHLLSILPPNYLE---WTDKTKIS- 307 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 L + + + +++ + + + + + + N D Sbjct: 308 -------GLSDINFSLKGQYLAEENKMPDAHLALKIKDGKLAYQDFPTPLQNLTLDLNVD 360 Query: 346 LKKDDIQYSVNKKEEKDNSHDKE 368 L D + + E+ + + K+ Sbjct: 361 LPNADPKKVILNLEKLNFNLGKD 383 >gi|120603069|ref|YP_967469.1| hypothetical protein Dvul_2026 [Desulfovibrio vulgaris DP4] gi|120563298|gb|ABM29042.1| protein of unknown function DUF748 [Desulfovibrio vulgaris DP4] Length = 1354 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 34/296 (11%), Positives = 81/296 (27%), Gaps = 30/296 (10%) Query: 3 RRVLIGLGFLFSV-VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R +L L L+ +++G +P + R + ER + V+ K+ I PF Sbjct: 29 RVILWSLLGLYIFWLVIGGLVLPPVV-----RSELERTMAQHLRATCTVE---KVTINPF 80 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + +++ LS+ L + + +P ++ +G Sbjct: 81 TLRIRVLGVKVPDASGEGVLFGFRELSIAPSPAALFRLAPSLASARLVEPVVDITYFGEG 140 Query: 121 VSNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 ++ + ++ + G D+ + ++D++ + Sbjct: 141 RFSFSDIVPPSEATTDDKATPVFPFVISDFELVDGSFIFRDEPRGVTHTIADIDFIVPFT 200 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PII 231 + + D R A+ + I +A Sbjct: 201 SSLDMF------RDTPITPSLNATVDGSRMTVAGRLLPFAETQRTEFDIATEDVALEQFK 254 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 L +Q + + +EL G ++SD + Sbjct: 255 AYLAPFTPLRLEQGKARLELDLLVERLPSGQVELGLG-----GALRLSDILLNTPD 305 Score = 40.3 bits (92), Expect = 0.50, Method: Composition-based stats. Identities = 31/252 (12%), Positives = 75/252 (29%), Gaps = 24/252 (9%) Query: 49 AVKGGIKIHILPFPSVFF---------KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE 99 + G K+ P++ D+ + + ++ + ++ + Sbjct: 545 SFGGRAKVVFQSSPALQLTVSEGALMVDDLALAAQGKQGHALGVKHIGLKGLAVDYGKQS 604 Query: 100 IRVFDMYIDQPHLNFYLSSKGVSNWFQR--KSTMDMIHNVILEKIHVKGGRI----KIID 153 IR + + P +N L G+ S D V ++ G+ K+ Sbjct: 605 IRAAVLALTSPSVNLILGDDGLPLLPASTGDSQPDTGKKVKGDRQRRAQGKAGSSTKVES 664 Query: 154 QESDQVYFLSDLNLQISARFLNIISP-LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212 + + + + R N++ L +D ++ G + S ++ + Sbjct: 665 KARGTQEKARRGDTKTADRDWNLVLDSLELDGGTVNITERGAKAPTLQVSDLRVRTGALS 724 Query: 213 KNKAISLKIQLFPL-AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK-- 269 + L + L GN+ + L++ L+ Sbjct: 725 PDLTQRLPFDASMRWQKDGQLALKGNVRI--RPLDLDLNVKATKVDLAPLDIPLAMSTAM 782 Query: 270 ---SRLSGNFKI 278 RLSG+ ++ Sbjct: 783 QAGGRLSGDVRL 794 >gi|46579374|ref|YP_010182.1| hypothetical protein DVU0961 [Desulfovibrio vulgaris str. Hildenborough] gi|46448788|gb|AAS95441.1| conserved hypothetical protein [Desulfovibrio vulgaris str. Hildenborough] gi|311233198|gb|ADP86052.1| hypothetical protein Deval_0888 [Desulfovibrio vulgaris RCH1] Length = 1354 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 34/296 (11%), Positives = 81/296 (27%), Gaps = 30/296 (10%) Query: 3 RRVLIGLGFLFSV-VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R +L L L+ +++G +P + R + ER + V+ K+ I PF Sbjct: 29 RVILWSLLGLYIFWLVIGGLVLPPVV-----RSELERTMAQHLRATCTVE---KVTINPF 80 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + +++ LS+ L + + +P ++ +G Sbjct: 81 TLRIRVLGVKVPDASGEGVLFGFRELSIAPSPAALFRLAPSLASARLVEPVVDITYFGEG 140 Query: 121 VSNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 ++ + ++ + G D+ + ++D++ + Sbjct: 141 RFSFSDIVPPSEATTDDKATPVFPFVISDFELVDGSFIFRDEPRGVTHTIADIDFIVPFT 200 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PII 231 + + D R A+ + I +A Sbjct: 201 SSLDMF------RDTPITPSLNATVDGSRMTVAGRLLPFAETQRTEFDIATEDVALEQFK 254 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 L +Q + + +EL G ++SD + Sbjct: 255 AYLAPFTPLRLEQGKARLELDLLVERLPSGQVELGLG-----GALRLSDILLNTPD 305 Score = 39.5 bits (90), Expect = 0.84, Method: Composition-based stats. Identities = 30/252 (11%), Positives = 74/252 (29%), Gaps = 24/252 (9%) Query: 49 AVKGGIKIHILPFPSVFF---------KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE 99 + G K+ P++ D+ + + ++ + ++ + Sbjct: 545 SFGGRAKVVFQSSPALQLTVSEGALMVDDLALAAQGKQGHALGVKHIGLKGLAVDYGKQS 604 Query: 100 IRVFDMYIDQPHLNFYLSSKGVSNWFQR--KSTMDMIHNVILEKIHVKGGRI----KIID 153 IR + + P +N L G+ S D V ++ G+ K+ Sbjct: 605 IRAAVLALTSPSVNLILGDDGLPLLPASAGDSQPDTGKKVKGDRQRRAQGKAGSSTKVES 664 Query: 154 QESDQVYFLSDLNLQISARFLNIISP-LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212 + + + + N++ L +D ++ G + S ++ + Sbjct: 665 KARGTQEKARRGDTKTADTDWNLVLDSLELDGGTVNITERGAKAPTLQVSDLRVRTGALS 724 Query: 213 KNKAISLKIQLFPL-AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK-- 269 + L + L GN+ + L++ L+ Sbjct: 725 PDLTQRLPFDASMRWQKDGQLALKGNVRI--RPLDLDLNVKATKVDLAPLDIPLAMSTAM 782 Query: 270 ---SRLSGNFKI 278 RLSG+ ++ Sbjct: 783 QAGGRLSGDVRL 794 >gi|34497551|ref|NP_901766.1| transmembrane protein [Chromobacterium violaceum ATCC 12472] gi|34103406|gb|AAQ59768.1| probable transmembrane protein [Chromobacterium violaceum ATCC 12472] Length = 1272 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 97/357 (27%), Gaps = 39/357 (10%) Query: 2 LRRVLIGLGF------LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55 L+R L+ L AFT L + +R E+ + +G ++++ + Sbjct: 10 LKRSLLVLAVSLFTACALVSAAFAAFTFWLLPNLDQYRPRLEQSLSGALGHRVSIS-RLS 68 Query: 56 IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 H P + I G + ++++ + L S E+R+ M +D P + Sbjct: 69 GHWQDVAPQFELSGVSIANPVSGQ-ALTLSRVTVQPSWTSLWSWEVRLA-MRVDGPAVEL 126 Query: 115 YLSSKGVS-------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166 S G + + ++ R+ D+ L + Sbjct: 127 RRSVGGTIYLNGFDLTSGPSSDNALGNWLLRQPSLEIRNARLSWEDERLGLPRLDLRQGS 186 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 L + L LS G G + +P + ++ + + Sbjct: 187 LTLERNLLGHRVQLS----GVPAATLGKGFQLSANWRGDDINGWPQWSGSVKVALNGARA 242 Query: 227 AYPII------IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK------KSRLSG 274 + G + G S + + + +L G Sbjct: 243 DIWSRYMREMGVLHRGEGDGTLEMSFSDGSVSSLQADVSVRDAAYTPPSARELVLPQLQG 302 Query: 275 NFKISDG-----NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 ++ + S L S + K + + + + + H Sbjct: 303 KLQLDRQFSGSYKIAASELTLASSTGLAFDKSSIKGQWQPGAKGGGELTLDNVDVGH 359 >gi|170691359|ref|ZP_02882524.1| conserved hypothetical protein [Burkholderia graminis C4D1M] gi|170143564|gb|EDT11727.1| conserved hypothetical protein [Burkholderia graminis C4D1M] Length = 1395 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 100/327 (30%), Gaps = 36/327 (11%) Query: 2 LRRVL-IGLGFLFSVVLVGA---FTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55 LRR L + L + + A + + FR E + + + + G + Sbjct: 27 LRRTLHVVLALALVLYFIAAGLFLGLRYVVLPRVDTFRPRIEATVSDKLHAQFTI-GKLA 85 Query: 56 IHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 H P + ++ I + I + + L + + +DQP + Sbjct: 86 PHWSGFQPGLDITNLVIRDHDG-KPALTIPHATATLSWRSLWQFHPALSSLIVDQPDVLI 144 Query: 115 YLSSKGVSNWFQRK-------STMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166 GV + + V + I V+GG ++ D + D L D+ Sbjct: 145 SRGGDGVLSVAGVPVPTRHSGNDTLSTWLVRQQAIVVRGGVLRWRDAQRDAPELALRDIR 204 Query: 167 LQISARFLNI----ISPLSIDSIKGSVIA-----EGTGNFDNKRSAFKITA---NFPAKN 214 + I + +P ++G + K +K A P Sbjct: 205 IAILNDGYDHRLALQAPPDGQLLRGPLDFRTHFRHAPLAAIGKPINWKGQAYVSTGPVDL 264 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270 ++ I+ + ID + + + + S +AG L +L + Sbjct: 265 PTLARYIKFPIETFAGRIDNAIWVDFADG-RMTSASGQMAGADVALRVRPTQPKLLLPIA 323 Query: 271 RLSGNFKISDGN--VRISRYKLQSILP 295 + G+ ++++ + + P Sbjct: 324 NFGWRLQAQQGDYELQLNDMRAELGQP 350 >gi|254253177|ref|ZP_04946495.1| hypothetical protein BDAG_02429 [Burkholderia dolosa AUO158] gi|124895786|gb|EAY69666.1| hypothetical protein BDAG_02429 [Burkholderia dolosa AUO158] Length = 1398 Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 107/331 (32%), Gaps = 37/331 (11%) Query: 2 LRRVLIG---LGFLFSVVLVGAFTVPLFI---DWTDFREDFERQATLIVGKKIAVKGGIK 55 LRRV +G V GAF ++ +FR ER + + ++++ G + Sbjct: 24 LRRVFKVTLAVGIGAYFVASGAFLGLRYVLLPRIDEFRPRIERTVSDKLHAQLSI-GKLS 82 Query: 56 IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 H P V +++ I ++ + + ++ LL + + +D+P L Sbjct: 83 PHWSGMQPGVEVENLTIRGRDGQI-ALSVPHATAALSWISLLRLSPALSSLIVDRPDLVV 141 Query: 115 YLSSKGVSNWF-------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166 ++ G + + + + E I ++ G ++ D + D LS + Sbjct: 142 ARAADGSLSIAGVGVPTTRGGNDTFSTWLLKQEAIVLRSGTLRWRDAQHDAPELALSGIR 201 Query: 167 LQISARFLNIISPLSIDSIK----GSVIAEGTGNFDNKRSAFKIT--------ANFPAKN 214 L + + L + G + K + + P Sbjct: 202 LAVLNDGRTHKAALQAPANGTLLLGPLDFRARFTHRPLAPIGKPSNWTGDAYLSTGPVDL 261 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270 + +S I + + ID +++ +G + G L +L Sbjct: 262 QTLSRYIDMPLTIHAGRIDNAIWATFHDGHLRSAGG-DLQGADVALRVRPTQPQLDVPTV 320 Query: 271 RLSGNFKISDGN---VRISRYKLQSILPNSS 298 + ++ G + ++R+ + P Sbjct: 321 GFGWDMALNAGRDYTLHLTRFNAELGQPPLP 351 >gi|153005727|ref|YP_001380052.1| AsmA family protein [Anaeromyxobacter sp. Fw109-5] gi|152029300|gb|ABS27068.1| AsmA family protein [Anaeromyxobacter sp. Fw109-5] Length = 874 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 36/317 (11%), Positives = 89/317 (28%), Gaps = 42/317 (13%) Query: 37 ERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS-FESKIEGLSMRAEFLPL 95 + +G+ + + G + + V D++I E +++ + A L Sbjct: 44 AATLSQQLGRPVEIGG-VATKLWGGLGVRVTDVKIGAGEGEPLPLAELRRAEVEANLLRA 102 Query: 96 LS---GEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN---------------- 136 L EI+V + ++ +N G +N + + Sbjct: 103 LRTGGEEIQVDEAVLEGLRVNVVKLPDGTTNLERVADRLAKPEEERPAEPAPPEQPPFRL 162 Query: 137 VILEKIHVKGGRIKIIDQE--SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 + +++ V+ RI +D+ + ++ DL++++ L + + + Sbjct: 163 LRVDRAAVENARIAFLDRTVPGAKELYVDDLDVEVKDLETGKPLELVVRAAVLAQTQNLE 222 Query: 195 GNFDNKRSAFKIT--------------ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 + + A L + + DL G + Sbjct: 223 LRVKAAPLPASLEVVPEEVVLKVQPIVLDPLAPFLPAELGFRGGRFQADLSADLGGAVPG 282 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS--DGNVRISRYKLQSILPNSS 298 E G F A L + + G +RI + +L + ++ Sbjct: 283 GEGPLEVRGGFRATQLAF-AGQEGGKALDVALDSDLEADMKAGELRIGKLELTAGP--AA 339 Query: 299 TDEDNKTKVSQDEENLL 315 + + Sbjct: 340 LVGKGRATGLNGDSPRF 356 >gi|240139671|ref|YP_002964148.1| hypothetical protein MexAM1_META1p3123 [Methylobacterium extorquens AM1] gi|240009645|gb|ACS40871.1| conserved hypothetical protein, AsmA family protein; putative exported protein [Methylobacterium extorquens AM1] Length = 632 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 46/334 (13%), Positives = 101/334 (30%), Gaps = 12/334 (3%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LRR L L + A +P I+ R G +A +G ++ +LP Sbjct: 3 LRRTLSALALGLVAAGLVAACLPWSIEAPGTARFVSRGLQQGWGVALAARGRTEVVLLPL 62 Query: 62 PSVFFKDIRIDQKEDGSFESKI-EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS-K 119 P + F+D+R+ + + LS++ LL+G + V + +D L + Sbjct: 63 PRIVFEDVRLTEGDAAGPVLAAGGNLSLQLGLAALLTGRVEVDSLTLDGSELVLPQEAGD 122 Query: 120 GVSNWFQR--KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 + ++ +I + +K D + D++L IS + Sbjct: 123 PRWSAAAERLTHSIAGADGDRPRRIILARCALKGRDPRDGTLQTARDVDLTISWPAWSES 182 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 ++ A T + F + + L + Sbjct: 183 LAVNGGFRWSDGSARITLTDLRPYALFSGGESPFTAALTWPTGSLSAQGNGSLRDGLKAS 242 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297 + + ++ G L L + + G+F+ + G ++ ++S Sbjct: 243 GTGSLQTRSLHKTLALTG---GGLALSPFVEDFAVEGSFEAAAGQIQFPSVTVRS----D 295 Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331 + + + A +L+ Sbjct: 296 GNVLEGAGSATFGPKRN-AVQATLAAENLNLSPL 328 >gi|16330525|ref|NP_441253.1| hypothetical protein sll1586 [Synechocystis sp. PCC 6803] gi|1653016|dbj|BAA17933.1| sll1586 [Synechocystis sp. PCC 6803] Length = 1749 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 45/380 (11%), Positives = 110/380 (28%), Gaps = 29/380 (7%) Query: 16 VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE 75 + G T + + + + + + + + + + F I Sbjct: 40 AIAGGVTYGHYWVQRNVSPLVGQAVEHFLNRPVELGPLTSVSL---THLEFGATSIPATA 96 Query: 76 DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH 135 +++ L + L E + +P F G W + Sbjct: 97 TDPNWVQLQSLKISYNPWQYLQDEHLGLTITAMEPQAYFEQGRSGQW-WHTEMGQLAEDF 155 Query: 136 NVILEKIHVKGGRIKIIDQESDQVYFLS-DLNLQISARFLNIISPLSIDSIKGSVIA--- 191 LEK+ V+ GR ++ + Q L L + + L ++G ++ Sbjct: 156 PFQLEKLIVRRGRGTVVSRNGHQALNQPIQLRLNDAQFWQGSNQELFRFRLQGQLLPLVE 215 Query: 192 -EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID---LFGNLFW---NEKQ 244 N + + K++ + L L P+ L +L +++ Sbjct: 216 RHSYLNLEGTIDPAQERWQLQVKSRHLPLTALKQILPLPLNFQRGTLDSDLAIAVEDQQL 275 Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 G + +L +L+ + ++G +++ + K Q + + K Sbjct: 276 ASLDGEVDLHQASLQL--PQLARPLTAINGPLTFQGRKIQLGQVKGQLGEIQAQS----K 329 Query: 305 TKVSQDEENLLNFSENGAESMHDLN----ETDFFEEEEKKNKNDDLKKD--DIQYSVNKK 358 + + L + E + + ++ + Q +V + Sbjct: 330 GHIDWQDGFNLAIATAPLEVNKIFQGLQFPPATMPISGQLSSTVTIQGPLENPQINVALQ 389 Query: 359 EEKDNSHDKENQE--NFSGD 376 + NS EN +F + Sbjct: 390 KAGKNSLQIENLALDDFQAN 409 >gi|307943583|ref|ZP_07658927.1| AsmA family protein [Roseibium sp. TrichSKD4] gi|307773213|gb|EFO32430.1| AsmA family protein [Roseibium sp. TrichSKD4] Length = 949 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 113/343 (32%), Gaps = 48/343 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+L+GL L +++ A +P F+ + Q G ++ + G + + + P Sbjct: 1 MRRLLLGLASLLFLLVTAALVIPFFLPKDLIKNQVIAQVDQQFGWRLRLDGPVSLSLFPG 60 Query: 62 PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 ++ + I + + +K EGL + + LL G+IR+ +++++P + + Sbjct: 61 FALNAEQIGLSGEAGADGIEFAKAEGLKVGLAWGGLLGGDIRITGVHLEKPGILMDIGPS 120 Query: 120 GVSNWFQR------------------------------KSTMDMIHNVILEKIHVKGGRI 149 G+++W R S+ + + ++++ + G + Sbjct: 121 GLTSWEPRRRFGTNTPDAPAREIETANESAAPAPSQDQSSSTAFLERIGIDQLTISDGMV 180 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209 + D S + + + LS S+ G V E F K + + Sbjct: 181 RYTDHRSGTDFRV-----------AALNLSLSASSLTGVVELESDFQFQEKPLSVSGQID 229 Query: 210 FPAKNKAISLK-IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF----SKLLNLE 264 P A ++ + L + + I L G+ Q S + Sbjct: 230 NPLAFAAGEVRPLLLNIASNEVKIGLEGSAGLKPLQIDLVVQGSAPSANDLLALADVTPN 289 Query: 265 LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 L + ++ + S D + Sbjct: 290 RDLGAFELGAKVTGDPTRITVADLAATLGSLSVSGSSDTDLSL 332 >gi|226946301|ref|YP_002801374.1| hypothetical protein Avin_42760 [Azotobacter vinelandii DJ] gi|226721228|gb|ACO80399.1| conserved hypothetical protein [Azotobacter vinelandii DJ] Length = 981 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 40/332 (12%), Positives = 110/332 (33%), Gaps = 32/332 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + L + + ++ RQ V + ++ ++ PF Sbjct: 1 MPKGLKPALVTLAAAPALYGLFGFLVLPGVAQQVINRQLPRFVTQPANLE---RLEFNPF 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + +R+ + + E L + ++ L SG + + ++ +++PH+ L +G Sbjct: 58 TLELTLHRLRLGEAGNEQ--LAFERLYGKLQWDSLWSGHLHLAELQLERPHVEVLLDKQG 115 Query: 121 VSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS----DL 165 N Q + V L++ + G+I DQ+ + + L Sbjct: 116 ELNLAHLFKLPPASPEQEEEPAGAPFPVHLDRFLLSAGQIHFQDQQPSEPVEVRYDALQL 175 Query: 166 NLQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANF-------PAKNK 215 ++ N + L++ + G + G + RS+ K+ + P Sbjct: 176 EVRNLGTLPNDTAELTLQASGPNAGRIDWSGQFSLVPMRSSGKLGIDQLGLATWWPYVRN 235 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL-SG 274 ++ L ++ L+ L + + + + + + + Sbjct: 236 SVPLVLENGTLSLSSDYQLDLAEGFRLQLQNAALKLAPFAIKAPDGRPLARLQSLEVGKT 295 Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 + +++ V I + + Q + ++ + D + Sbjct: 296 SLDLAERRVSIGQVQGQGLETWAAREADGELD 327 >gi|317486259|ref|ZP_07945092.1| hypothetical protein HMPREF0179_02450 [Bilophila wadsworthia 3_1_6] gi|316922505|gb|EFV43758.1| hypothetical protein HMPREF0179_02450 [Bilophila wadsworthia 3_1_6] Length = 1225 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 48/379 (12%), Positives = 114/379 (30%), Gaps = 29/379 (7%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61 R L G+G L ++ A ++P + R E Q + V + ++ + + PF Sbjct: 45 RACLFGIGLLCALWTALAVSLPPTV----LRGVVESQLSEAVNAPVTIE---SLSVNPFT 97 Query: 62 PSVFFKDIRID----QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 + + +R+ IE L +R + + P L+ Sbjct: 98 LGIAVRGVRVPYLEETGTPDGALLTIERLDIRPRLRLFADAAPIQAALRVYNPVLDITYL 157 Query: 118 SKGVSNW------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS- 170 G+ ++ T L + +KGG I + D V+ +SD+N + Sbjct: 158 GNGLFSFSKLLPAPSGADTAPDTPLFALSDLDLKGGTILLRDGPVGMVHTVSDVNFHVPL 217 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 R ++ ++ ++ + G + + T + + P+ Sbjct: 218 LRSADLPFAPTLSALVNGTRIDVEGRTEPDAETLRTTFAIHTAPLHMEHFKRYLSDFTPL 277 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKSRLSGNF-----KISDG 281 ++ G + + + + E++ + + G + D Sbjct: 278 NLN-SGTVALDMLFTLSQPHLGRVESSLSGTVKVEDAEIATPEGTIVGRLRRGQAALKDF 336 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341 + R +L + + + K + + + E + Sbjct: 337 TLSERRIRLDEMELDGLYLRVGRDKAGRIDWVDWLSGTDANPENLSPETPFVVEGADLIL 396 Query: 342 KNDDLKKDDIQYSVNKKEE 360 +N D D + ++ E Sbjct: 397 RNSDFTWVDASLADTQQIE 415 Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 27/228 (11%), Positives = 59/228 (25%), Gaps = 19/228 (8%) Query: 40 ATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE 99 + + I + G + I S+ +D+R+ + + LS S Sbjct: 736 LSANLDATITEEKGKDLGIQASGSLTVRDLRLKDARTEKVYAVLRRLSADTFRFSSASSS 795 Query: 100 IRVFDMYIDQPHLNFYLSSKGVSNWF------QRKSTMDMIHNVILEKIHVKGGRIKIID 153 +M +D ++ L++ + Q + + ++ + D Sbjct: 796 FEAKEMLLDLLRMDVALNADKTLDILECVPKKQTGQEPSSPFRFSVASLRLQDAALLFRD 855 Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213 Q V + D+N +S + TG + N + Sbjct: 856 QAHGSVSAVQDINATVSGLSSSGGLS----------DIVLTGQIGGAPITLSGSCNPFST 905 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261 A L + P+ G + F+ Sbjct: 906 PPAAKLAFTAKGVDLARY---SAYTRAYLGYPVVQGRLDLESAFATSG 950 Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 32/287 (11%), Positives = 81/287 (28%), Gaps = 30/287 (10%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 +V +D I E + ++ + L IR+ +M +D +L G Sbjct: 307 TVKVEDAEIATPEG-TIVGRLRRGQAALKDFTLSERRIRLDEMELDGLYLRVGRDKAGRI 365 Query: 123 NWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS----DLNLQI 169 +W + + V + ++ +D + D + Sbjct: 366 DWVDWLSGTDANPENLSPETPFVVEGADLILRNSDFTWVDASLADTQQIEITGVDGRIAE 425 Query: 170 SARFLNIISPLSID---SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 + + + + S +G + +G G + + L + Sbjct: 426 YSTRPGARTAMRLSFGISTEGVLAVDGEGTLTPPSLNASLWVDDLPLIVLRPLLGETPLN 485 Query: 227 AYPIIIDLFGNLFWNEK--------QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278 I + G + + P + +V G + + L + LS + Sbjct: 486 DILGRIAIKGGVRFGSDGKTPQTPAAPASATSLAVTGAEASVSALSFGRG-NSLSAADRK 544 Query: 279 SDGNVRISRYKLQSILPN----SSTDEDNKTKVSQDEENLLNFSENG 321 + + +++++ N + K E + + +G Sbjct: 545 AGKDAGSPAVRIRALTFNGLHFDTQARSASVKTLSVEAPEVRVTSSG 591 >gi|206561618|ref|YP_002232383.1| hypothetical protein BCAL3279 [Burkholderia cenocepacia J2315] gi|198037660|emb|CAR53603.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 1399 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 42/331 (12%), Positives = 100/331 (30%), Gaps = 37/331 (11%) Query: 2 LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55 LRRV + V + + +FR ER + + ++++ G + Sbjct: 24 LRRVFRVTLAVGIGTYFVASGAFLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GKLS 82 Query: 56 IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 + P V ++ I ++ + + ++ LL + + +DQP L Sbjct: 83 PNWSGMQPGVELTNLTIRGRDGKV-ALSVPHATAALSWMSLLRLSPALSSLIVDQPDLVV 141 Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166 ++ G + + + E I ++GG ++ D + D LS + Sbjct: 142 ARAADGSLSVAGVGVATTHGGNDTFGTWLLKQEAIVLRGGTLRWRDAQHDAPELVLSGIR 201 Query: 167 LQISAR----FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT--------ANFPAKN 214 L + + +P + + G + K + P Sbjct: 202 LAVLNDGRVHKAALQAPANGTLLLGPLDFRARFKHKPLAPIGKPANWTGDAYLSTGPVDL 261 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270 + ++ + + + ID + + +G + G L L Sbjct: 262 QTLTRYLDVPLTIHAGRIDNAIWATFGDGHLRSAGG-DLQGADVALRVRPTQPRLDVPTV 320 Query: 271 RLSGNFKISDG---NVRISRYKLQSILPNSS 298 + + G + ++R+ + P Sbjct: 321 GFGWDMVLDSGHDYTLHLTRFNAELGQPPLP 351 >gi|113954688|ref|YP_731084.1| hypothetical protein sync_1880 [Synechococcus sp. CC9311] gi|113882039|gb|ABI46997.1| Uncharacterized conserved protein [Synechococcus sp. CC9311] Length = 1467 Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 110/327 (33%), Gaps = 15/327 (4%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILP 60 R V+ GLGF T ++ R E+Q ++ +G I + + Sbjct: 4 RVVISGLGFTVVAAAAVWLTADRLLEQAVNGLRPSLEQQLSVPLGHPIEIGPYRGLGFD- 62 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + I+I + +++ LS+ + L + V + ++N + +G Sbjct: 63 --GIGIGPIKIRPGTKDASSLRVQKLSLGIDPLSSIRHLRLVVVARLKGAYVNLRRNQQG 120 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 +S + +H V L + +I++ + Q+ L+++ ++ + + + Sbjct: 121 QFWVPGPRSDGEFLHRVDLRVRLIDPAKIRVE-PANLQLSLAGAARLRLNEKWADGVFQV 179 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 + +GSV +G ++D + L P+ + W Sbjct: 180 GLP-DRGSVKLKGLAHWDRPEFRLTTRLKRIRLDNLQGLLPMAQPIQLRGQVGGDLRFEW 238 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 N Q G SV G L+ + +L D + I R + + +S Sbjct: 239 NRGQTSCGGGLSVVGFKVSGQPLQHPLESRQL--RLHCDDDRLTIPRSQWRYGPYRAS-- 294 Query: 301 EDNKTKVSQDEENLLNFSENGAESMHD 327 + ++Q + S E D Sbjct: 295 LGGRFHLNQ----RFDLSATLKELNQD 317 >gi|322417663|ref|YP_004196886.1| hypothetical protein GM18_0121 [Geobacter sp. M18] gi|320124050|gb|ADW11610.1| hypothetical protein GM18_0121 [Geobacter sp. M18] Length = 541 Score = 80.7 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 61/372 (16%), Positives = 127/372 (34%), Gaps = 36/372 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV-GKKIAVKGGIKIHILP- 60 + VL LG L +++L+ FID R ER+ + G ++ + K+H P Sbjct: 20 KAVLWVLGILVALLLI-VVIASFFID-EPLRRTTERRMNQSLKGYQVRL---PKLHFSPI 74 Query: 61 FPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF---YL 116 S+ K + + Q ++ L ++ +LSG++ DM +D+P ++ L Sbjct: 75 GLSITLKGLTVSQQAHPEPPVAEFPYLRTSVQWREILSGKLVG-DMSLDEPKIHVNLKQL 133 Query: 117 SSKGVSNWFQRKSTMDMI----HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 S+ S ++ + + + + + I ID++ D+ L+ LNL+ + Sbjct: 134 RSEAASTVPMKQKGWQQAVEAIYPLKINLLKINDASITYIDEDPDRPLKLTHLNLEANNI 193 Query: 173 FLNIISP---LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 + S ++ + G G+ + + P +L++ P+AY Sbjct: 194 RNIHLPDKVYPSDFHLETDIFGSGHGSVAGRANFLA----EPTPAVKAALELAKVPIAYF 249 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS---GNFKISDGNVRIS 286 + N+ G +L+ +L R Sbjct: 250 APVLARSNVRIQGGVLSADGDIEYGRKVQTARLKKLTIHGVKLDYVHTPETAQAEKRRAR 309 Query: 287 RYKLQSILPNSSTDED------NKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKK 340 + K + + D T + N +G + L++ DFF + Sbjct: 310 KVKEAAREVTNKPDLILTVEHLGLTGANLGVINDF----DGRKVRLFLSDADFFLDNFSN 365 Query: 341 NKNDDLKKDDIQ 352 + K + Sbjct: 366 QFSKGPAKAKLS 377 >gi|145589956|ref|YP_001156553.1| membrane protein-like protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048362|gb|ABP34989.1| membrane protein-like protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 1384 Score = 80.7 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 34/316 (10%), Positives = 94/316 (29%), Gaps = 26/316 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDF---REDFERQATLIVGKKIAVKGGIKIHI 58 L+R+LI +G + +++++G V ++ W + E+ +G ++++ +++ Sbjct: 26 LKRILILIGLVCALLVIGHLGV-RYVLWPQLEKSKASVEKIIGARIGAEVSID-KLQVAW 83 Query: 59 -LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 +P+ + +R + E I + + D++ + + + Sbjct: 84 TGLWPNFEIEGLRFNSAEKSKPLLLINKIYGELSWKSFYHLAPYFRDLHFEGAEIYAQRN 143 Query: 118 SKGVSNWFQRKSTMDM------IHNVILEKIHVKGGRIKIIDQESDQVYF---LSDLNLQ 168 + G + + I V ++ DQ++ + + L+L Sbjct: 144 NNGAISIAGISIDSNSNDFSAENWLFSQNSIEVNNAKLFWDDQKNKRPITSVEIVSLSLD 203 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTG--NFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 R L+ G + + + + ++ N + Sbjct: 204 NGIRKHEGSIRLNTPWANGPAEMKVSFVPHLAGQAGNWRDWIGTIYWNLS-------DLD 256 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 I NL E +G + ++A +L + + Sbjct: 257 LKQISQQFSINLTTLEGILSSNGQLKIDNGHPDGGEFYVAAD--QLIIQTSKDTEAIALG 314 Query: 287 RYKLQSILPNSSTDED 302 R + + Sbjct: 315 RLETNLSQETNDGLLS 330 >gi|254562081|ref|YP_003069176.1| hypothetical protein METDI3686 [Methylobacterium extorquens DM4] gi|254269359|emb|CAX25325.1| conserved hypothetical protein, AsmA family protein; putative exported protein [Methylobacterium extorquens DM4] Length = 632 Score = 80.7 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 101/334 (30%), Gaps = 12/334 (3%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LRR L L + A +P I+ R G +A +G ++ +LP Sbjct: 3 LRRTLSALALGLVAAGLVAACLPWSIEAPGTARFVSRGLQQGWGVALAARGRTEVVLLPL 62 Query: 62 PSVFFKDIRIDQKEDGSFESKI-EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS-K 119 P + F+DIR+ + + LS++ LL+G + V + +D L + Sbjct: 63 PRIVFEDIRLTEGDAAGPVLAAGGNLSLQLGLAALLTGRVEVDSLTLDGSELVLPQEAGD 122 Query: 120 GVSNWFQR--KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 + ++ +I + +K D + D++L IS + Sbjct: 123 PRWSAAAERLTHSIAGADGDRPRRIILARCALKGRDPRDGTLQTARDVDLTISWPAWSDS 182 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 ++ A T + F + + L + Sbjct: 183 LAVNGGLRWSEGSARITLTDLRPYALFSGGESPFTAALTWPTGSLNAQGNGSLRDGLKAS 242 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297 + + ++ G L L + + G+F+ + G ++ ++S Sbjct: 243 GTGSLQTRSLHKTLALTG---GGLALSPFVEDFAVEGSFEAASGQIQFPSVTVRS----D 295 Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331 + + + A +L+ Sbjct: 296 GNVLEGAGSATFGPKRN-AVQATLAAENLNLSPL 328 >gi|256421431|ref|YP_003122084.1| hypothetical protein Cpin_2392 [Chitinophaga pinensis DSM 2588] gi|256036339|gb|ACU59883.1| hypothetical protein Cpin_2392 [Chitinophaga pinensis DSM 2588] Length = 1075 Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 55/405 (13%), Positives = 127/405 (31%), Gaps = 46/405 (11%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58 +LR +LI + L + G L+ ++ + ++ + G + Sbjct: 9 ILRILLIPVAILIIL--AGIAVGVLYSQQQRLINLAIKELNKQLPGELVIGGSMISPFQN 66 Query: 59 LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 P+ S+ KD++ + G ++E L + +L + V +++ + HL+ Sbjct: 67 FPYISIGLKDVKFFATKQKTGRPMYQLEKLYVGFSLPDILQQKYNVKVIFLKKGHLDLVR 126 Query: 117 SSKGVSNWFQRKSTMDMI----------HNVILEKIHVKGGRIKIIDQESDQVYF--LSD 164 + G N + ++ ++KI + I D+ S Q +S Sbjct: 127 DNNGNLNIVEANRIQQDTIATAAAESAALDLDIKKIVLSELEISFTDRPSGQHVNARISK 186 Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 + A I + + + + + + F NK T + + ++L Sbjct: 187 IKTSFRAADNKIFADFTGGMVADYITPKDSSLFRNKHLNADFTVTYDQTKEFVTLT---- 242 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 GNL + SG + + ++ +F + + Sbjct: 243 ----------KGNLKLEDFSFSVSGTADLKNGNNVDFKIKGDKPDIGQLMSFAPASVADQ 292 Query: 285 ISRYKLQSILPNSSTDEDNK--------TKVSQDEENLLNFSENGAESMHDLNETDFFEE 336 + ++K K +V+ EN + + + ++ F+ Sbjct: 293 VKQFKYD-GRLYFDGLVKGKLAGEQMPLIQVNFGCENGWLMNPDAKK----RIDSLGFKG 347 Query: 337 EEKKNKNDDLKKDDIQYSVNK-KEEKDNSHDKENQENFSGDKMIL 380 LK ++ EK ++F+ KMI+ Sbjct: 348 YYTNGAEHSLKTSELHLMNMSAIPEKGIFKGNFVMKDFTDPKMIM 392 >gi|157961426|ref|YP_001501460.1| hypothetical protein Spea_1600 [Shewanella pealeana ATCC 700345] gi|157846426|gb|ABV86925.1| protein of unknown function DUF748 [Shewanella pealeana ATCC 700345] Length = 1073 Score = 80.3 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 54/415 (13%), Positives = 120/415 (28%), Gaps = 71/415 (17%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61 R +LI S V VP I + +Q + ++ + + ++ ++ I PF Sbjct: 23 RLLLIVSAIYLSFTAVLGLLVPYII-----VKQAPKQLSELLQRPVTLE---RVKINPFT 74 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG 120 V + + + + + LS +F L + V D+ + P +N Sbjct: 75 LEVAVDNFELHETNN-QPFVGFKQLSFEYQFWNSLFNTAFSVADVTLAAPSINVERIKAP 133 Query: 121 V------------------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 + ++ + + + I+ + + + ID ++ Sbjct: 134 QSLRFNFSDIIDTLANRPKTEQSEQSTESSRLPHFIVTNLAIVNADLSFIDHVTNSQLHY 193 Query: 163 SDLNLQISARFLNIIS-----PLSIDSIKGSVIAEGTGNFDN--------KRSAFKITAN 209 +LNL + N + L G + S I + Sbjct: 194 PELNLNVKFFDSNHVIKSTLENLGDKQQTNHYAIHVVGRNGGEIATQGLVQLSPLNIVGD 253 Query: 210 FPAKNKAIS-----LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE 264 N + + Q P+ + L N + + + LN + Sbjct: 254 VQLTNIQLPQFWSFISEQFAPVLTSGRLSLSSNYQLQIQNDKFEVTTDLGLVKLDELNFD 313 Query: 265 ------LSAKKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317 ++ + L G F + V ++ N+ ++D Sbjct: 314 YQEQSIINLPMTALKGIAFDLQQQTVTAETLDTHGLVLNTKINKDG-------------- 359 Query: 318 SENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQEN 372 + ++ +NE F + + + K +I S E +S E + Sbjct: 360 -IDLSKLFTPINEKPVFTQ--AQAPKPKITKPEITKSEKNSSEATSSESIEPADT 411 >gi|289804052|ref|ZP_06534681.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 245 Score = 80.3 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 28/268 (10%), Positives = 76/268 (28%), Gaps = 50/268 (18%) Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS------ 122 + + + + + + + PLLS ++ V + + + ++ V Sbjct: 1 MTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAVRSDDAPV 60 Query: 123 ---NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 + D + + + V G + + E+D + D+ L + + + Sbjct: 61 APKDNTLPDVAEDRGWSFDIRSLRVA-GSVLVFQHENDDQVTVRDIRLNMEQDAEHRGT- 118 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 F N ++ A+S + YP Sbjct: 119 ----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP---------- 146 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 N I + + G +E + +L ++ + + + L + + + Sbjct: 147 HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA----NDS 199 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHD 327 +V+ E+ ++ D Sbjct: 200 SLTGHVQVTLAEQPEWQIDLRSSKLNLD 227 >gi|163852335|ref|YP_001640378.1| AsmA family protein [Methylobacterium extorquens PA1] gi|163663940|gb|ABY31307.1| AsmA family protein [Methylobacterium extorquens PA1] Length = 632 Score = 80.3 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 102/334 (30%), Gaps = 12/334 (3%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LRR L LG + A +P I+ R G +A +G ++ +LP Sbjct: 3 LRRTLSALGLGLVAAGLVAACLPWSIEAPGTARFVSRGLQQGWGVALAARGRTEVVLLPL 62 Query: 62 PSVFFKDIRIDQKEDGSFESKI-EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS-K 119 P + F+DIR+ + + LS++ LL+G + V + +D L + Sbjct: 63 PRIVFEDIRLTEGDATGPVLAAGGNLSLQLGLAALLTGRVEVDSLTLDGSELVLPQEAGD 122 Query: 120 GVSNWFQR--KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 + ++ +I + +K D + D++L IS + Sbjct: 123 PRWSAAAERLTHSIAGADGDRPRRIILARCALKGRDPRDGTLQTARDVDLTISWPAWSES 182 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 ++ A T + F + + L + Sbjct: 183 LAVNGGLRWSDGSARITLTDLRPYALFSGGESPFTAALTWPTGSLNAQGNGSLRDGLKAS 242 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297 + + ++ G L L + + G+F+ + G ++ ++S Sbjct: 243 GTGSLQTRSLHKTLALTG---GGLALSPFVEDFAVEGSFEAAAGQIQFPSVTVRS----D 295 Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331 + + + A +L+ Sbjct: 296 GNVLEGAGSATFGPKRN-AVQATLAAENLNLSPL 328 >gi|116075437|ref|ZP_01472697.1| hypothetical protein RS9916_27794 [Synechococcus sp. RS9916] gi|116067634|gb|EAU73388.1| hypothetical protein RS9916_27794 [Synechococcus sp. RS9916] Length = 1456 Score = 80.3 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 37/315 (11%), Positives = 90/315 (28%), Gaps = 18/315 (5%) Query: 6 LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65 L+G G F++ + A + R E+Q + +G + + + + Sbjct: 9 LVGGGAWFALDRLAASLL------DQMRPQLEQQLSKPLGHPLRIGEFRGLRFW---GIA 59 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 +D + + ++ + + + L L V + + LN +++G W Sbjct: 60 LGPTTVDSGPSDASTASVQSVGIAFDPLASLQRWKPVAVVRLQGARLNLRRNAQGAY-WV 118 Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 S + + L + +++I Q +Q+ + + + Sbjct: 119 PGSSGDEPPPKLDLTIQLIDPAQVRIE-PADLQFSVAGQGAVQLDQSWGDGAFQVVFP-E 176 Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 +G + G + + L ++ + L W Q Sbjct: 177 QGRLGLRLKGGWRKPEVDVQAKIEKLRLRSFQGLIPTANAVSLDGQLGGDLRLGWRSGQI 236 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 G S+ + + S + +L ++I S Sbjct: 237 SCGGGLSLVNFSLQTDGAQGSLRSPQL--QMSCKSDRLQIVPSAWSYG----SYRATLAG 290 Query: 306 KVSQDEENLLNFSEN 320 V+ + L F + Sbjct: 291 DVALNRRFDLRFKLH 305 >gi|37522510|ref|NP_925887.1| hypothetical protein glr2941 [Gloeobacter violaceus PCC 7421] gi|35213511|dbj|BAC90882.1| glr2941 [Gloeobacter violaceus PCC 7421] Length = 1556 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 39/357 (10%), Positives = 105/357 (29%), Gaps = 22/357 (6%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93 E Q + + + + G ++ +LP+ + + + + + S+ L Sbjct: 34 AQAEVQLSRTLKTPVRL-GRLQA-LLPW-RIAVGPVSVASPK-KPDLLEAPSASVGFNLL 89 Query: 94 PLLSGEIRVFDMYIDQPHLNFYLSSKGVSN---WFQRKSTMDMIHNVILEKIHVKGGRIK 150 G+ + +++P L ++G N + ++ + +L ++ + Sbjct: 90 RFAFGQGLDARIRVEKPVLRLRRDAQGRFNLPSFAAGETRSGGTIDKLLSRVEIDDATFV 149 Query: 151 IIDQE-SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA- 208 D+ + L+ +++ L+ +G V AEG + D+ + Sbjct: 150 YDDRVLGGKSLTLTGIDVLADIGPTGAAYTLNAPFGRGEVQAEGNSDLDDFDTTIDARLR 209 Query: 209 NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268 N P A+ L + + L SG + G L Sbjct: 210 NIPVATAAVLLNLG-DLSVRGGTAEGAVQLRLKNGVFAASGPLRLTGGELLLRPYRAPLT 268 Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328 ++ + + R + + + + + E+ L+ G Sbjct: 269 NLDVAAKLAWP--KLNLERIEGRL----AGSRVSGTGAFNLPEDLGLDLIVAGPLEQLVP 322 Query: 329 N------ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 + + + D + + + + D+ NF ++ + Sbjct: 323 AFTSPPVPVRGVTRTALQARIPLARPDRLTATARVRAQTPVQVDRLVVNNFQAEQQL 379 >gi|294673070|ref|YP_003573686.1| hypothetical protein PRU_0299 [Prevotella ruminicola 23] gi|294472196|gb|ADE81585.1| conserved hypothetical protein [Prevotella ruminicola 23] Length = 1557 Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 47/375 (12%), Positives = 112/375 (29%), Gaps = 32/375 (8%) Query: 2 LRRVLIGLGF------LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55 +++VL LG L V+L +P +W + A+ G I V+ + Sbjct: 1 MKKVLKWLGIAVLVPILLIVILTALLYLPPVQNWAVKK--VAAIASEKTGMDITVE---R 55 Query: 56 IHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN-- 113 + + + + R + + + + +PL S + + ++ + LN Sbjct: 56 VCLEFPLDLGIEGFRALHQNQTDTIADVRKMVCDVRLIPLFSKRVVIDELSLTDAKLNTN 115 Query: 114 -----FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD-LNL 167 + W V + + ++ I ++ V + Sbjct: 116 GFIGDLRIKGNLQELWLSSNGIDLDQETVEVNGARLSEAQLDIALSDTAAVDTTESTMKW 175 Query: 168 QISARFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAI---SLKIQL 223 ++A ++I+ + + G ++ A+ R N K ++ ++ Sbjct: 176 IVNADSVSILKSNFMVHLPGDTLNAQAYMGRAVAREVLADLGNKIYKVGSLDWNQGRLNY 235 Query: 224 FPLAYPIIIDLFGN-LFWNEKQPIYS-GVFSVAGDFSKLLNLE----LSAKKSRLSGNFK 277 P + L N L + + + +L + + LS Sbjct: 236 DNRYEPEVSGLDYNHLALTDINLRIDSIEYVEPNTSLIIRDLRAKEKSGLQVNHLSARVT 295 Query: 278 ISDGNVRISRYKLQSILPNSSTDED---NKTKVSQDEENLLNFSENGAESMHDLNETDFF 334 + D + I + +LQ+ + T+ N Q L + + D Sbjct: 296 MDDKRLTIPQLRLQTPDTDIETELAMDFNTFDTQQPGAMKLRLNAQIGKQDVMRFAGDMP 355 Query: 335 EEEEKKNKNDDLKKD 349 + + N + Sbjct: 356 QAFVRNYPNHPISIK 370 >gi|320108700|ref|YP_004184290.1| AsmA family protein [Terriglobus saanensis SP1PR4] gi|319927221|gb|ADV84296.1| AsmA family protein [Terriglobus saanensis SP1PR4] Length = 554 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 21/216 (9%), Positives = 60/216 (27%), Gaps = 18/216 (8%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE--DGSFESKIEG 85 + F+ + VG+ + + + + +LP P ++ + + + + Sbjct: 38 NVNRFQRRIASSISRSVGRPVHLD-SVSMTLLPLPGFTLENFVVSEDPQFGSEPVMRADE 96 Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-----------FQRKSTMDMI 134 + L G++ + + P +N ++ G N Sbjct: 97 VKATLRVSSLWRGKLEFSTISLTAPSVNLVRNAAGRWNLETILLQASQIDAAPTQQKRAG 156 Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 I R+ + + + L+ + L + + + + Sbjct: 157 STPRFPYIEATDARVNVKLGDEKTPFSLTGAEFAL-WLPDPQEWRLRLKAKPARTDTDAS 215 Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 D + T AK + ++ + P+ Sbjct: 216 ---DTGELRVEATLRRAAKMSDVPIQAEAVWRRTPL 248 >gi|170732064|ref|YP_001764011.1| hypothetical protein Bcenmc03_0711 [Burkholderia cenocepacia MC0-3] gi|169815306|gb|ACA89889.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3] Length = 1399 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 39/331 (11%), Positives = 100/331 (30%), Gaps = 37/331 (11%) Query: 2 LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55 LRRV + + + + +FR ER + + ++++ G + Sbjct: 24 LRRVFRVTLAVGIGTYFIASGAFLGLRYVVLPRIDEFRPRIERAVSDKLHAQLSI-GKLS 82 Query: 56 IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 + P V ++ I ++ + + ++ LL + + +DQP L Sbjct: 83 PNWSGMQPGVELTNLTIRGRDGKV-ALSVPHATAALSWMSLLRLSPALSSLIVDQPDLVV 141 Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLN 166 ++ G + + + E I ++GG ++ D + + LS + Sbjct: 142 ARAADGSLSVAGVGVATTHGGNDTFGTWLLKQEAIVLRGGTLRWRDAQHAAPELVLSGIR 201 Query: 167 LQISAR----FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT--------ANFPAKN 214 + + + +P + + G + K + P Sbjct: 202 IAVLNDGRVHKAALQAPANGTLLLGPLDFRARFKHKPLAPIGKPANWTGDAYLSTGPVDL 261 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270 + ++ + + + ID + + +G + G L L Sbjct: 262 QTLTRYLDVPLTIHAGRIDNAIWATFGDGHLRSAGG-DLQGADVALRVRPTQPRLDVPTV 320 Query: 271 RLSGNFKISDG---NVRISRYKLQSILPNSS 298 + + G + ++R+ + P Sbjct: 321 GFGWDMVLDAGHDYTLHLTRFNAELGQPPLP 351 >gi|116688764|ref|YP_834387.1| hypothetical protein Bcen2424_0741 [Burkholderia cenocepacia HI2424] gi|116646853|gb|ABK07494.1| conserved hypothetical protein [Burkholderia cenocepacia HI2424] Length = 1399 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 38/331 (11%), Positives = 100/331 (30%), Gaps = 37/331 (11%) Query: 2 LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55 LRRV + + + + +FR ER + + ++++ G + Sbjct: 24 LRRVFRVTLAVGIGTYFIASGAFLGLRYVVLPRIDEFRPRIERAVSDKLHAQLSI-GKLS 82 Query: 56 IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 + P V ++ I ++ + + ++ LL + + +DQP L Sbjct: 83 PNWSGMQPGVELTNLTIRGRDGKV-ALSVPHATAALSWMSLLRLSPALSSLIVDQPDLVV 141 Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLN 166 ++ G + + + E + ++GG ++ D + + LS + Sbjct: 142 ARAADGSLSVAGVGVATTHGGNDTFGTWLLKQEAVVLRGGTLRWRDAQHAAPELVLSGIR 201 Query: 167 LQISAR----FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT--------ANFPAKN 214 + + + +P + + G + K + P Sbjct: 202 IAVLNDGRVHKAALQAPANGTLLLGPLDFRARFKHKPLAPIGKPANWTGDAYLSTGPVDL 261 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270 + ++ + + + ID + + +G + G L L Sbjct: 262 QTLTRYLDVPLTIHAGRIDNAIWATFGDGHLRSAGG-DLQGADVALRVRPTQPRLDVPTV 320 Query: 271 RLSGNFKISDG---NVRISRYKLQSILPNSS 298 + + G + ++R+ + P Sbjct: 321 GFGWDMVLDAGHDYTLHLTRFNAELGQPPLP 351 >gi|107021817|ref|YP_620144.1| hypothetical protein Bcen_0257 [Burkholderia cenocepacia AU 1054] gi|105892006|gb|ABF75171.1| conserved hypothetical protein [Burkholderia cenocepacia AU 1054] Length = 1399 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 38/331 (11%), Positives = 100/331 (30%), Gaps = 37/331 (11%) Query: 2 LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55 LRRV + + + + +FR ER + + ++++ G + Sbjct: 24 LRRVFRVTLAVGIGTYFIASGAFLGLRYVVLPRIDEFRPRIERAVSDKLHAQLSI-GKLS 82 Query: 56 IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 + P V ++ I ++ + + ++ LL + + +DQP L Sbjct: 83 PNWSGMQPGVELTNLTIRGRDGKV-ALSVPHATAALSWMSLLRLSPALSSLIVDQPDLVV 141 Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLN 166 ++ G + + + E + ++GG ++ D + + LS + Sbjct: 142 ARAADGSLSVAGVGVATTHGGNDTFGTWLLKQEAVVLRGGTLRWRDAQHAAPELVLSGIR 201 Query: 167 LQISAR----FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT--------ANFPAKN 214 + + + +P + + G + K + P Sbjct: 202 IAVLNDGRVHKAALQAPANGTLLLGPLDFRARFKHKPLAPIGKPANWTGDAYLSTGPVDL 261 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270 + ++ + + + ID + + +G + G L L Sbjct: 262 QTLTRYLDVPLTIHAGRIDNAIWATFGDGHLRSAGG-DLQGADVALRVRPTQPRLDVPTV 320 Query: 271 RLSGNFKISDG---NVRISRYKLQSILPNSS 298 + + G + ++R+ + P Sbjct: 321 GFGWDMVLDAGHDYTLHLTRFNAELGQPPLP 351 >gi|254432544|ref|ZP_05046247.1| conserved hypothetical protein [Cyanobium sp. PCC 7001] gi|197626997|gb|EDY39556.1| conserved hypothetical protein [Cyanobium sp. PCC 7001] Length = 1386 Score = 79.9 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 32/278 (11%), Positives = 75/278 (26%), Gaps = 23/278 (8%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAE 91 R E+Q +G + + + + R+ + LS+ + Sbjct: 20 VRPRLEQQIGKALGHPLQLG---DYRGFGWAGLRLGPTRVLPGRADGSSLRASRLSVSLD 76 Query: 92 FLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI 151 + L + V + + ++ +++G F + L + R+ I Sbjct: 77 PVSSLRRRLPVLQLTLAGLEVDLRRNAQGQYWVFGAGDPDVPPPRLDLRLRMQQPARVTI 136 Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSID---------SIKGSVIAEGTGNFDNKRS 202 + + + + G V GN+ +R Sbjct: 137 RPAPEASRQLRLAVQAGAELQVHEEAIQVRGSLQPLDGRGVAGDGRVRLVAKGNWGQQR- 195 Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG--NLFWNEKQPIYSGVFSVAGD--FS 258 + A ++ + L +L L + G L W + +P G + + Sbjct: 196 ---LQAEVLSQGFPLQLPARLLGLPGALQGSGDGRVRLGWRDGRPDCQGELRLRQVEWQA 252 Query: 259 KLLNLELSAKKSRLSGN---FKISDGNVRISRYKLQSI 293 N + + RL + + R + Sbjct: 253 PGSNPPVGVQNPRLRCRGESLSLVPTDWRWGDLSGRVG 290 >gi|56460909|ref|YP_156190.1| outer membrane protein [Idiomarina loihiensis L2TR] gi|56179919|gb|AAV82641.1| Probable outer membrane protein [Idiomarina loihiensis L2TR] Length = 786 Score = 79.9 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 54/401 (13%), Positives = 128/401 (31%), Gaps = 51/401 (12%) Query: 3 RRVLIGLGFLFSV-VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 RR+ L L + L+G F +P I + A G+++ ++ +H P+ Sbjct: 21 RRIRFWLLVLVILYTLLGFFALPWVIQY-----VAVNTAKEDFGRELRIE---SVHTNPY 72 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 ++ + ++ K+D L + E+ ++ + ID+ + G Sbjct: 73 TLTLRMNGVTLNDKDDRQ-LLGWGNLLVNLEWSSIIDQTWTFEAIRIDKLMIQEERFVSG 131 Query: 121 VSNWFQRKSTMDMI---------------HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 + + + + + + ++ G ++ D D Sbjct: 132 ETRFSRLAAESSGPEAGKEKAEKEESAEMPALRIRDFKLENGILRFADNLKDVTAADDAE 191 Query: 166 NLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKIT---ANFPAKNKAIS 218 Q+S NI + +++ + G + AF T PA Sbjct: 192 PKQVSLALQNIGLSVKDFTLQNDASFPLRLNGQLT-KGGKLAFDGTFQLLPSPALEGNAE 250 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278 + F A P + F N+ +G S + SA + L+ Sbjct: 251 INELAFKQAAPY-LQQFMNVQLENGTLTLNGQMSTNAQQP--FAFKGSASINTLNIKEAS 307 Query: 279 SDG------NVRISRYKLQSILP---NSSTDEDN-KTKVSQDEENLLNFSE----NGAES 324 +D +++ ++ L + +V +++ NF + A++ Sbjct: 308 NDETLLGWDSLQTGQFDLNIASKEIETAPIVVKGLSARVVINQDKTTNFGQLVVDTPADT 367 Query: 325 MHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSH 365 D N+++ + + +L D+Q++ ++ Sbjct: 368 KGDTNKSEETQPFGITIEGVELSDGDVQFADKSLPLPFSTS 408 >gi|37520152|ref|NP_923529.1| hypothetical protein gll0583 [Gloeobacter violaceus PCC 7421] gi|35211145|dbj|BAC88524.1| gll0583 [Gloeobacter violaceus PCC 7421] Length = 835 Score = 79.9 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 39/354 (11%), Positives = 100/354 (28%), Gaps = 32/354 (9%) Query: 4 RVLIGLGFLFSVVLVG---AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 + LG L V L+ +P F++ F +++ + ++ A+ +++ L Sbjct: 27 WLWRALGALAVVGLIAGGVLLVLPFFVEDKSFDALVQKELSTWTRRE-AILSRVRLRTLG 85 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 V ++++ + K + +F L+ +++V + +D+ ++ + G Sbjct: 86 GFGVVVDNLQLLGSDGNVD-LKARQAFIELDFFALILQDLKVRLVELDEARIDLKRNRDG 144 Query: 121 VSNWFQRKSTMDMIHNVILE----KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 NW + + + + + G + I D + L + L+ Sbjct: 145 RWNWADLQPPDRPSGTLKADLTRTGLRLIGASVAITDAQPRPAQQFLIAPLSLKLDDLDE 204 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI---QLFPLAYPIIID 233 + L + + + + LKI + P Sbjct: 205 RTLLVSVQGAAADYRSKRIADLSADGRLLRPVDGDWFSSQGELKILCRKFRPRLLRDYTR 264 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL------------------SAKKSRLSGN 275 L + G + D L +L + G Sbjct: 265 QIAGLSGLAGVYDFDGDWRRDSDNRVSLKGKLFSRLLHWRWPEVLGKKIWQVRNLGFEGA 324 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 ++ V + R ++ + + K + + + D Sbjct: 325 VSLTGSTVAVERLRVSTEGID--VQLAGKVVTPGNPKGKAAVDLKLNSAYFDPF 376 >gi|323524811|ref|YP_004226964.1| hypothetical protein BC1001_0442 [Burkholderia sp. CCGE1001] gi|323381813|gb|ADX53904.1| hypothetical protein BC1001_0442 [Burkholderia sp. CCGE1001] Length = 1407 Score = 79.9 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 101/326 (30%), Gaps = 34/326 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPL------FIDWTDFREDFERQATLIVGKKIAVKGGIK 55 LRR L + L V+ A + L FR E + + + + G + Sbjct: 27 LRRTLHVVLALALVLYFIAAGLFLGLRYGVLPRVDSFRPHIEATVSDKLHAQFTI-GKLA 85 Query: 56 IHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 H P + ++ I + I + + L + + +DQP + Sbjct: 86 PHWTGFQPGLDITNLVIRDHDG-KPALTIPHATATLSWRSLWQFRPVLSSLIVDQPDVLI 144 Query: 115 YLSSKGVSNWFQRK-------STMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166 GV + + + V E I V+GG ++ D + D L D+ Sbjct: 145 ARGGDGVLSVAGVPVPTRHSGNDILSTWLVRQEAIVVRGGVLRWRDAQRDAPELALHDIR 204 Query: 167 LQISARFLNI----ISPLSIDSIKGSVIAEGTGN-----FDNKRSAFKITA---NFPAKN 214 + I + +P + G + K +K A P Sbjct: 205 IAILNEGYDHRLALQAPPDGQLLHGPLDFRTHFRHTPLSAIGKPVNWKGQAYVSTGPVDL 264 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQ-PIYSGVFSVAGDFSKLLNLELSAKKSRLS 273 ++ I+ + ID + + + + SG + A ++ + + Sbjct: 265 PTLARYIKFPIETFAGRIDNAIWVDFADGRMSSASGQMAGADVALRVRPTQPKLLLPVAN 324 Query: 274 GNFKIS----DGNVRISRYKLQSILP 295 +++ D ++++ + + P Sbjct: 325 FGWRLQAQQGDYTLQLNDLRAELGQP 350 >gi|109896519|ref|YP_659774.1| hypothetical protein Patl_0188 [Pseudoalteromonas atlantica T6c] gi|109698800|gb|ABG38720.1| conserved hypothetical protein [Pseudoalteromonas atlantica T6c] Length = 1301 Score = 79.5 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 49/382 (12%), Positives = 121/382 (31%), Gaps = 22/382 (5%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI- 58 +++++ L +V V V + + + E+ G +I + G I Sbjct: 11 IIKKLWTCAAILLVLVAVAISVVRYTLPYMDGQKHRLEQWVEGRYGVEINI-GTITAQWK 69 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL- 116 P++ +D+++ Q I+ + +F +L +IR ++ ++ + Sbjct: 70 GAGPAIVLEDLQLVQNAQSPLSLDIKKTIIELDFWGSILGRQIRSQRFDLNGLNVKVDVT 129 Query: 117 --SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL---NLQISA 171 + +G + L+ V + +I QV ++ L N + Sbjct: 130 LMNKEGSDFPVVSALKQLFLEQ--LQSFSVSDSQFEISTAHDQQVVLVNQLLWSNSGLHH 187 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 + + + + S S + G+ D+ F A+ + I+ + Sbjct: 188 QGVGELQVEELASNSASFTLDLRGDKDSLNGTFYARAHEVDLSPWINQWLATRYDLVESR 247 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN----VRISR 287 + + + +A N + + L G N + Sbjct: 248 GNFVVWASIQDGDIK-NAQLDLADSRFVWQNEDAEITAAILGGQLNAEPSNDGWVFNLYD 306 Query: 288 YKLQSILPNSSTDEDN----KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343 LQ+ +++ + +V + ++ S LN D F + + N Sbjct: 307 LALQANERTQTSNWYGEINHQGQVHIQNADRVDLSAITPLLPLVLNPVD-FNLLKDLSPN 365 Query: 344 DDLKKDDIQYSVNKKEEKDNSH 365 L K ++++ + + N Sbjct: 366 ATLNKFNVKFDKSDTYAQVNLS 387 >gi|218531094|ref|YP_002421910.1| AsmA family protein [Methylobacterium chloromethanicum CM4] gi|218523397|gb|ACK83982.1| AsmA family protein [Methylobacterium chloromethanicum CM4] Length = 632 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 101/334 (30%), Gaps = 12/334 (3%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LRR L L + A +P I+ R G +A +G ++ +LP Sbjct: 3 LRRTLSALALGLVAAGLVAACLPWSIEAPGTTRFVSRGLQQGWGVALAARGRTEVVLLPL 62 Query: 62 PSVFFKDIRIDQKEDGSFESKI-EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS-K 119 P + F+DIR+ + + LS++ LL+G + V + +D L + Sbjct: 63 PRIVFEDIRLTEGDAAGPVLAAGGNLSLQLGLAALLTGRVEVDSLTLDGSELVLPQEAGD 122 Query: 120 GVSNWFQR--KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 + ++ +I + +K D + D++L IS + Sbjct: 123 PRWSAAAERLTHSIAGADGDRPRRIILARCALKGRDPRDGTLQTARDVDLTISWPAWSES 182 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 ++ A T + F + + L + Sbjct: 183 LAVNGGFRWSDGSARITLTDLRPYALFSGGESPFTAALTWPTGSLNAQGNGSLRDGLKAS 242 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297 + + ++ G L L + + G+F+ + G ++ ++S Sbjct: 243 GTGSLQTRSLHKTLALTG---GGLALSPFVEDFAVGGSFEAAAGQIQFPNVTVRS----D 295 Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331 + + + A +L+ Sbjct: 296 GNVLEGAGSATFGPKRN-AVQATLAAENLNLSPL 328 >gi|82702186|ref|YP_411752.1| hypothetical protein Nmul_A1057 [Nitrosospira multiformis ATCC 25196] gi|82410251|gb|ABB74360.1| conserved hypothetical protein [Nitrosospira multiformis ATCC 25196] Length = 1264 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 113/359 (31%), Gaps = 22/359 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFP 62 VLI + +FSV+L+ L + +RE+ + G+ + + G I + P Sbjct: 2 WVLIAVAAVFSVLLLSLRYWLL-PNIEQYRENLASAISHASGQYVTL-GEISANWDGFRP 59 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + +D+R+ + + + L + +L GE+ ++ IDQP L + GV Sbjct: 60 HMMLRDVRVHDNQGVT--LLLNRLEGTLSWRSILHGELLFREIAIDQPDLIVRRDTAGVI 117 Query: 123 NWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + + ++ + I D + +NL++ R Sbjct: 118 HVAGFALKQEFTESEDGFFDWLLNQRQVIINNANILWQDDQRTAPQLELLVNLRLENRGR 177 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 + + + + + + + + + Sbjct: 178 HHRFGIRA---IPPTRLAAHLDMRGDFKGESLANPGLWRGRLFMQITRADIAGWQAWLPF 234 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSK--LLNLELSAKKSRLSGNF---KISDGNVRISRYK 289 + N ++ G ++ L K+RL ++ R+ +K Sbjct: 235 PEEIKLNRGVGALRIWANIDGTDMNKVTADMRLQNVKARLESTLPEVSLTRLAGRVGWHK 294 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLL-NFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347 ++ N S + + + L + + HD ++ D + + D L+ Sbjct: 295 VEDNGSNGSQFFARRLDAAFYGKPPLPLLDFSFQQLHHDASQPDSNTLSVQNLRLDKLE 353 >gi|134094099|ref|YP_001099174.1| hypothetical protein HEAR0860 [Herminiimonas arsenicoxydans] gi|133738002|emb|CAL61047.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 1403 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 48/379 (12%), Positives = 118/379 (31%), Gaps = 29/379 (7%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKD 68 + L + + +R D E+ AT +G+ ++++ I P + + Sbjct: 49 AYFIFCALFLTLRYAVLPQISAYRVDVEKVATKAIGRPVSIE-TIAASWDGLRPHLALGN 107 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS------ 122 + + K+ ++ +S +L +L ++R+ + ID+P ++ + G Sbjct: 108 VVVYDKDG-DKALQLPAVSATVSWLSVLIADLRLHSLEIDKPDMDIQRDANGNFYVAGLL 166 Query: 123 -NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNIISPL 180 + + + +I ++ GR++ DQ L ++N+ + + L Sbjct: 167 VDLQKSGDGKAADWILSQREITIRDGRLRWQDQLRQAPELLLGNVNMVLRNNGRHHKFAL 226 Query: 181 S-IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 + + FD+ A KI+ + + A+ +D +L Sbjct: 227 QATPPAAIAAPLDVRAAFDHPLFAQKISDATRWTGELYTDLRDTNLAAWKTYLDFPFDLQ 286 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 F A + S +S + + ++R + + S Sbjct: 287 QASGSMRAWLAFDHARV----ADFTADLSLSNVSAQLRKDMPLLSLARANGRISVRES-- 340 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV---N 356 + + D + + ++ + + I Sbjct: 341 -LEGNAR---DGVPTFGMRGHTISVR----DFSLQTDDGLVLPKTTMSEHYIAAQNGKPE 392 Query: 357 KKEEKDNSHDKENQENFSG 375 E + S D + NF+G Sbjct: 393 SIEIQAASLDLQAWANFAG 411 >gi|187251264|ref|YP_001875746.1| hypothetical protein Emin_0854 [Elusimicrobium minutum Pei191] gi|186971424|gb|ACC98409.1| Uncharacterized protein involved in outer membrane biogenesis [Elusimicrobium minutum Pei191] Length = 715 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 47/363 (12%), Positives = 108/363 (29%), Gaps = 53/363 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFT----VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++++L LF + ++ + + A ++++ + Sbjct: 1 MKKLLKIAAVLFLIAVIAVAGAAIALRQIFTPEKIKNIITTYAKTNYNREVSFD-KLSFK 59 Query: 58 ILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + V + + + +K + + ++ PL I V + +D + N Sbjct: 60 L---IGVELSNFAMSEAGTFKNGTFAKADSMVIKIALRPLFKKSIEVSTIGLDGFNSNII 116 Query: 116 LSSKGVSNWFQRKSTMDMIH-----------------NVILEKIHVKGGRIKIIDQESDQ 158 KG N+ D+ NV ++K + I D++ Sbjct: 117 KDEKGNFNFDDLIPAADVASSAQPKTPKEIEEQGLSFNVQVDKFFILNSAINYTDKKEKM 176 Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI- 217 + D+N++I+ L+ ++ + KN + Sbjct: 177 TAQIKDVNVKINDFVLDGPF-----AVNSDFRLLYNAQDMAVDMPVSVNLMADLKNNNLD 231 Query: 218 -------SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS------VAGDFSKLLNLE 264 SL L + + G +N SG + ++ S L + Sbjct: 232 AAELTLKSLTASLNGITTNFQGTVKG---FNNPIISVSGTVNNVNNKTLSSFVSDLPDFS 288 Query: 265 LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 L A K + N IS+Y + + + VS ++L+ ++ + Sbjct: 289 LPAVKLASDIKLNLDKSNAEISKYS----ASLTKSTVNGSANVSFGGKDLVYNAKANLKL 344 Query: 325 MHD 327 D Sbjct: 345 FVD 347 >gi|295675585|ref|YP_003604109.1| hypothetical protein BC1002_0497 [Burkholderia sp. CCGE1002] gi|295435428|gb|ADG14598.1| conserved hypothetical protein [Burkholderia sp. CCGE1002] Length = 1420 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 80/246 (32%), Gaps = 19/246 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTV------PLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55 LRR L L L V+ A V + FR E + + + + G + Sbjct: 27 LRRTLRVLATLALVLYFIAGGVFLGLRYVVLPRIDTFRPRIEAAVSDKLRTQFTI-GRLA 85 Query: 56 IHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 H F P + ++ I + I + + L + + +DQP + Sbjct: 86 PHWSGFQPGLDVTNLVIRDHDG-QPALTIPHATATVSWRSLWEFHPALSSLIVDQPDVLV 144 Query: 115 YLSSKGVSNWFQRK-------STMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLN 166 S GV + + + + I V+GG ++ D + L D+ Sbjct: 145 SRSDDGVLSVAGVPVPTRHSGNDALSTWLLRQQAIVVRGGVLRWRDATRHEPELALRDIR 204 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 + I + +++ + + +G +F ++A N + + P+ Sbjct: 205 IAILNDGHDHR--MALQAPPDGQVLKGPLDFRTHFRHAPLSAIGKPINWTGQVYMSTGPV 262 Query: 227 AYPIII 232 P + Sbjct: 263 DLPTLA 268 >gi|262166070|ref|ZP_06033807.1| AsmA protein [Vibrio mimicus VM223] gi|262025786|gb|EEY44454.1| AsmA protein [Vibrio mimicus VM223] Length = 618 Score = 79.5 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 43/334 (12%), Positives = 94/334 (28%), Gaps = 57/334 (17%) Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMD------------- 132 + + +PLL ++++ ++++D + G SN Sbjct: 1 MGIDVPVMPLLDKQLKIGNIHLDGAEFHLETLKDGRSNLDALTQAQSKQAAAPAATESTP 60 Query: 133 ----------MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL----QISARFLNIIS 178 ++ L + V ++I+D ++ L D+ L + + Sbjct: 61 TPETTSSEPTAAWSIELGGVSVSNAVLEIVDHKAGTQTKLYDVQLSVSEFMPDSWTKATF 120 Query: 179 PLSIDSIKGSVIAEGTGNF-----------------------DNKRSAFKITANFPAKNK 215 + + A+G N+ + K+ + +K Sbjct: 121 AAKGNKDQQKFAAQGDAEVRLSADFKQYALRNINLDASFSDPSNQIDSAKLKLDTFEFDK 180 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS--VAGDFSKLLNLELSAKKSRLS 273 A +L L A + ++ G+ + I + L S K L Sbjct: 181 ANALTFSLAGKAADMKLNAKGSASLMVDKAISKVGLDGLKLEADLEGAALPQSPMKIGLD 240 Query: 274 GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL---NE 330 ++ L + N+ D K V+ + + F+ + E D N+ Sbjct: 241 SQISFDLTKSHLNVL-LNKLTANA-LSFDGKADVTLADIPKVRFNVHSPEIDLDAFLGNK 298 Query: 331 TDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364 T E + + + E D S Sbjct: 299 TAATEPTPANDSAAASSSAPVASGAPAEVEPDLS 332 >gi|91217477|ref|ZP_01254436.1| outer membrane assembly protein [Psychroflexus torquis ATCC 700755] gi|91184362|gb|EAS70746.1| outer membrane assembly protein [Psychroflexus torquis ATCC 700755] Length = 874 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 135/397 (34%), Gaps = 37/397 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI 58 +++ +G + ++++G F P+ F+ E+ + + + + + Sbjct: 1 MKKAFKIIGIVILILIIGLFLTPIL-----FKGSIEKMLKNAANDNVNAQVEWSSLNLSL 55 Query: 59 ---LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112 P SV +D+ + K G + ++ + L E + + ++Y+++ ++ Sbjct: 56 FRNFPNASVSLEDLSLVNKAPFEGDTLVYAKNFNISMGIMQLFKDEGLSIDEIYLNEAYM 115 Query: 113 NFYLSSKGVSNW-----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 N + S G +N+ K N+ L + RI +D+ + Sbjct: 116 NVKVDSLGNANYDIAKSTDVKQEATTKGKESKPFNLNLSHYEINSSRINYLDESGNIFLR 175 Query: 162 LSDLNLQISARFLNIISPLSIDS-IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 L++ + F + L + K S +GT + N +N S Sbjct: 176 LTEFSHSGDGNFEASVFTLKTQTESKVSFDFDGTNYLNANSLVLDADLNIDLENMKFSF- 234 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKIS 279 ++ + + + G + + FS + DF L L A S L G Sbjct: 235 LENEAIVNQLPLKFEGYVQTFDDYNDIDIKFSTPSSDFKNFLALIPEAYASNLDGVTTTG 294 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE--NLLNFSENGAESMHDL---NETDFF 334 D + + + + S D + + + D+ NET Sbjct: 295 DFQLNG----IIKGKVDDTYIPTLDISASSDNASFQYPDLPKKVEDISLDIRIQNETGLV 350 Query: 335 EEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371 E+ K KN D + D +++ + + ++ N + Sbjct: 351 EDTYIKFKNVDFRIDQDRFAGSGSVKNLTTNMLVNLK 387 >gi|58039387|ref|YP_191351.1| hypothetical protein GOX0923 [Gluconobacter oxydans 621H] gi|58001801|gb|AAW60695.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H] Length = 656 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 101/348 (29%), Gaps = 24/348 (6%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +LR L+ + L ++L ++ID D + + + + + G + IH Sbjct: 17 LLRWFLVSILSLTVLLLALFGAGWIWIDHKDLAAFATAKLERKLDRPVHI-GALHIHPGT 75 Query: 61 FPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 + ++ D+ + G + L + L+ G ++ I + F + Sbjct: 76 WLTIEADDVSVANIASGTRPQMMTLGHLGAQVRLTSLIWGPPETRNIVISKFSGLFERTP 135 Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII- 177 + NW D + E+ + + + D ++ + Sbjct: 136 AHLPNWRFGPHQNDPRPPLTPEQQAKADAPPDLHSAPGLRNVTILDSDVTYRSANGASYK 195 Query: 178 -----SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI---SLKIQLFPLAYP 229 L+ S + +G ++ A + + + Sbjct: 196 ATLGKVELASTSDTSPLTMTLSGAYNGTPIAISAEMEPIRDLRKTPQRPYGTKAHVTSGD 255 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK------KSRLSGNFKISDGNV 283 + D G L G +V S L K K LSG+F S + Sbjct: 256 MTSDFTGTLTDPTNFDGVEGHTTVTTPTSDTLFNVAGIKGDHAPVKLTLSGDFSHSGNDW 315 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQD--EENLLNFSENGAESMHDLN 329 + +ST ED + + + + + D+N Sbjct: 316 HFRKAN---GTIQTSTMEDGDFTLVEGSHGKPD-DVTAKIGFGRLDIN 359 >gi|313203416|ref|YP_004042073.1| outer membrane assembly protein [Paludibacter propionicigenes WB4] gi|312442732|gb|ADQ79088.1| outer membrane assembly protein [Paludibacter propionicigenes WB4] Length = 890 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 42/282 (14%), Positives = 81/282 (28%), Gaps = 22/282 (7%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------I 56 ++ L G V + +P F+ + A + K+ I Sbjct: 6 KKGLKIGGSTVVVFFLILLILPF-----AFKGKITKLAKEQINGKLNATVDFDKINLSFI 60 Query: 57 HILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLN 113 PF +V +++RI + E + + L S + + + I+ + Sbjct: 61 RHFPFATVSIENLRIVGINEFKKDTLLSSESVDLVLNLSSLFSDKGYEIRKLQINNSRIL 120 Query: 114 FYLSSKGVSNWFQRKSTMDM-------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 ++ G NW K+ N+ L+ +K I D+ Q + +LN Sbjct: 121 AHVLPNGKDNWTVTKTDSTQKNDTTPMSFNLKLKDFEIKKAYIVYWDELGKQKAVIHNLN 180 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 S F S L + S+ G ++ ++ A A K Sbjct: 181 HHTSGDFTADSSMLKTKTTIDSLDYWMGGVKYLSKADVELNATIDANLNKKIYKFSENSS 240 Query: 227 A-YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA 267 I G + + K + + A Sbjct: 241 RINAIPFSFAGWVKMLDDGYDMDLTLDAKKVDFKAILSMIPA 282 >gi|297538928|ref|YP_003674697.1| hypothetical protein M301_1742 [Methylotenera sp. 301] gi|297258275|gb|ADI30120.1| conserved hypothetical protein [Methylotenera sp. 301] Length = 444 Score = 79.2 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 59/375 (15%), Positives = 129/375 (34%), Gaps = 43/375 (11%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 L ++L A +P FI + D+ D E+ + + + +++K I+ LP P Sbjct: 2 TWLKCTLIAIGLLLGMALILPYFIAFNDYIPDIEKAISTELKEPVSIK-NIRFSPLPRPH 60 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY----LSSK 119 + I + ED K+ + + + LL I + + I+ P ++ + Sbjct: 61 LTVDGISVGTNED----IKLNKVVLIPDIFSLLQSPIVIKSIEINSPIISQQAFSKVLEL 116 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 +N V +E IH IK S ++L + + Sbjct: 117 SKTNADPASQKSSP---VRVENIHFINALIKFGKVNFGPFD--SRIDLNNDGKLVEASIK 171 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 S +++ S+ + + + + K + P+ P+++D L Sbjct: 172 TSDEALSISIKPDQSSYLIDVYA-----------------KQWILPIEPPLLLD---ELN 211 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP--NS 297 S + S S +K+ +GN+ I++ ++Q I +S Sbjct: 212 IKGVATSNDVKLSKINAKLYDGSASGSISLSWFK-EYKL-NGNLDINQVEMQKIASMLSS 269 Query: 298 STDEDNKTKVSQDEENLLNFSEN-GAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356 T K + + + + S N + ++ L+ F+ + D++K + Sbjct: 270 KTHFSGKLEA----KPIFSASANTADQLINSLHLVTPFKVQSGVLYGVDIQKAATSIIKS 325 Query: 357 KKEEKDNSHDKENQE 371 + DK + + Sbjct: 326 GSTGGETRFDKLSGQ 340 >gi|83952642|ref|ZP_00961372.1| hypothetical protein ISM_10830 [Roseovarius nubinhibens ISM] gi|83835777|gb|EAP75076.1| hypothetical protein ISM_10830 [Roseovarius nubinhibens ISM] Length = 1114 Score = 79.2 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 39/362 (10%), Positives = 90/362 (24%), Gaps = 32/362 (8%) Query: 6 LIGLGFLFSVVLVGAFTVPLFID-----WTDFREDFERQATLIVGKKIAVK-GGIKIHI- 58 L + + ++L A + + R + G + + G + + Sbjct: 26 LWSMISVAVLMLAAAGVMLSLMGTPVTVPDWLRVKVVERLNRDAG-PVRIDLGRAVVMVE 84 Query: 59 -LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 P + D+R ++ G+ + + +S PLL GE+R + + HL+ Sbjct: 85 EGWTPRLRLHDVRFSHRDSGAPIAAVSRVSGVLAMEPLLRGELRPKRVRLGGAHLSLRRD 144 Query: 118 SKGVSNWFQR--------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 G + + L + ++ D + + + + Sbjct: 145 EDGAIDLALGGARAVAIAEVVASIDMALQTPALSQLTDVSADNVTLRYEDARAGRAWNVD 204 Query: 164 D--LNLQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKI---TANFPAKNK 215 + L L + S+ ++ + + I Sbjct: 205 GGRIGLSREGDALRLRGDFSLLGARDYATNLELGFSSRIGESAAQLSILVEDMPADEIAG 264 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 L L PI L + + K + S Sbjct: 265 QSPALAWLGALEAPISGALRVAVDKVGGLGPLDASLHIGQGVLKPNDAVKPVGFSSARAY 324 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE-NLLNFSENGAESMHDLNETDFF 334 F + + I +L + + + E +N ++ Sbjct: 325 FTYTPQSQTIRFTELSLDSKWGRLRAEGQALLVGAESGWPTELQSQIRLRDIVVNPAGYY 384 Query: 335 EE 336 E Sbjct: 385 PE 386 >gi|308270298|emb|CBX26910.1| hypothetical protein N47_A09390 [uncultured Desulfobacterium sp.] Length = 1143 Score = 79.2 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 115/342 (33%), Gaps = 27/342 (7%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67 G L + LV + +P I + Q +L +G KI ++ + I + P K Sbjct: 8 WTGILLIIALVISLLLPHIISPEYLKAKIVEQVSLRIGYKIKLQ-YVDIMMFPRLHADIK 66 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL-----SSKGVS 122 ++ + + S +KI + E PL +G + ++ +Y+D P + + G+ Sbjct: 67 NVTLSAPGNFS--AKINNIKAYPEIWPLFTGNVNIYKLYLDDPAIKMDIPERLSGENGLF 124 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + + ++ + + ++ I I+ + V + L + R + L+ Sbjct: 125 KYDSIQKADKLLQDF-FKSRTLEKTDI-IVQIRNGNVALYAGNRLYFNFRDIFSRVKLNP 182 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID---LFGNLF 239 IK ++ A+ + I + + + +I+LF L ++ + L Sbjct: 183 KQIKIALDAKSNICDN-----ISINSQYFSYKSEGKGEIRLFNLNPKLLFNYLYPDSALK 237 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-----GNFKISDGNVRISRYKLQSIL 294 ++ + S G + L L N K + I+ ++ + Sbjct: 238 VDDSKIGIKVNLSKKGPSNFDLKFYGQIPLLLLKRDNEILNLKSRQFSGNINSFRDRIAF 297 Query: 295 PNSSTDEDNKTKVSQD----EENLLNFSENGAESMHDLNETD 332 DN + + D+ +T Sbjct: 298 NVEKLVIDNTESIYSAKYVVNPPDSPVQLDLEGKNIDIKKTG 339 >gi|325525551|gb|EGD03344.1| hypothetical protein B1M_16940 [Burkholderia sp. TJI49] Length = 315 Score = 79.2 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 90/289 (31%), Gaps = 21/289 (7%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI 58 M + L + V + + +FR ER + + ++++ G + H Sbjct: 1 MFKVTLAVGIGTYFVASGAFLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GKLSPHW 59 Query: 59 LP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 P V ++ I + + + ++ LL + + +DQP L + Sbjct: 60 SGMQPGVELTNLTIRGHDGRI-ALSVPHATAALSWMSLLRLSPALSSLIVDQPDLVVARA 118 Query: 118 SKGVSNWFQRK-------STMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQI 169 + G + + + E I ++GG ++ D + D LS + L + Sbjct: 119 ADGSLSVAGVDVATTHGGNATFSTWLLKQEAIVLRGGTLRWRDAQHDAPELALSGIRLAV 178 Query: 170 SAR----FLNIISPLSIDSIKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAISLKIQ 222 + +P + + G + T + + L+ Sbjct: 179 LNSGRVHKAALQAPANGTLLLGPLDFRARFTHKALAPVGKPSNWTGDAYLSTGPVDLQTL 238 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR 271 L P+ I G + G AG + ++ L + ++ Sbjct: 239 ARYLDMPLTIHA-GRIDNAIWATFRDGRLRSAGGDLQGADVALRVRPTQ 286 >gi|296161777|ref|ZP_06844579.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] gi|295887941|gb|EFG67757.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] Length = 1428 Score = 79.2 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 96/325 (29%), Gaps = 32/325 (9%) Query: 2 LRRVL-IGLGFLFSVVLVG---AFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55 LRR + L + V + + FR E + + + ++ Sbjct: 59 LRRTFHVVLAIALVLYFVATGLFLALRYVVLPRADSFRPRIEAIVSEKLHAQFSIGKLAP 118 Query: 56 IHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 P + ++ I ++ I + + L + + +DQP + Sbjct: 119 YWSGFQPGLDVTNLVIRDRDG-KTALTIPHATATLSWKSLWQFHPALSSLIVDQPDVLVA 177 Query: 116 LSSKGVSNWFQRKSTM-------DMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLNL 167 SS GV + + + I V+GG ++ D + + L D+ + Sbjct: 178 RSSDGVLSVAGVPVPTRHSGNDVLTTWLLRQQAIVVRGGVLRWRDAQHAAPELALRDIRI 237 Query: 168 QISARFLNIISPLSIDS----IKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAISLK 220 I + L + + G + T + L Sbjct: 238 AILNDGYDHRLALQAPAEGHVLNGPLDFRTHFRHAPLSAIGKPINWTGQVYVSTGPVDLP 297 Query: 221 IQLFPLAYPI-----IIDLFGNLFWNEKQ-PIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274 + +PI ID + + E + SG + A ++ + + Sbjct: 298 TLARYVNFPIETFAGRIDNAIWIDFAEGRMKSASGQLAGADVAMRVRPTQPKLLVPVANF 357 Query: 275 NFKIS----DGNVRISRYKLQSILP 295 +++ D +++S++ + P Sbjct: 358 MWRLEAEEGDYKLQLSQFHAELGQP 382 >gi|110638232|ref|YP_678441.1| outer membrane assembly protein [Cytophaga hutchinsonii ATCC 33406] gi|110280913|gb|ABG59099.1| outer membrane assembly protein [Cytophaga hutchinsonii ATCC 33406] Length = 1031 Score = 79.2 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 34/368 (9%), Positives = 114/368 (30%), Gaps = 30/368 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58 + + VLI L +++ V L+ + + + E+ + ++ + I Sbjct: 7 IQKWVLITGCILAVLLISPFIIVQLY--KDEIKTEIEKNIDENINGIVSFE-KINYSFFF 63 Query: 59 -LPFPSVFFKDIRIDQ--KEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNF 114 P ++ + + + I+ + ++ + +L +I + + +++P ++ Sbjct: 64 HFPNLTLAMNKVDVIGIHTFQKDTLAHIDRIDLQLNWFKLILKNKIEIDAVVLNKPIIHM 123 Query: 115 YLSSKGVSNWFQRKSTMDMI-----HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 + G +N+ K + L++ +K G I+ +++ + Q + D+ Sbjct: 124 LVKHDGSANYAIIKKDTINADTMEYAGISLDRFEIKEGTIRYLNESTRQWIEVYDIAHTG 183 Query: 170 SARFLNIISPLSIDSIKGSVIAEGT--GNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 + + +K+ + + F + ++ + Sbjct: 184 KIDIEKNKINYLTTTAVKHISVTDNDINYMHDKQLSLHMNLVFDLHSNTCFIQ-ENAIEL 242 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 + G++ + K F+ + + G +K N+ Sbjct: 243 NTFRFGMDGSVRFLPKGYHVDMTFASKQASFSDILSLIP-------GTYKKELKNIHTE- 294 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347 L + + + A+++ + + ++ + N + Sbjct: 295 -----GLLTCTGKIKGDYYDTSAVIPAFHVDLKIADAVLQVQDFPSKIKDIQCNLEIENT 349 Query: 348 KDDIQYSV 355 I ++ Sbjct: 350 SGIIDSTI 357 >gi|242281131|ref|YP_002993260.1| hypothetical protein Desal_3675 [Desulfovibrio salexigens DSM 2638] gi|242124025|gb|ACS81721.1| protein of unknown function DUF748 [Desulfovibrio salexigens DSM 2638] Length = 1228 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 32/297 (10%), Positives = 93/297 (31%), Gaps = 30/297 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-P 62 +V + + L + F + F ++ + ++ + + ++ ++ + P+ Sbjct: 17 KVGLIVAGLLIFYTIIGFLLIPF----TIKKVALSKLPAVLNRDVRIE---QVDLNPYTL 69 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV- 121 + I +KE + + + L + + ++ I P ++ + G Sbjct: 70 QLTVHGFEIGKKEGEGNLFSFKTFDLNLDSFSLFRLSLILDEIKIVDPQIDLAVFRGGSS 129 Query: 122 -----------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + + + I+ + V G ++ D+ D + +S L+L + Sbjct: 130 VSDLIPEGDVEEQPEEANTDEKELFPFIVRDLVVSNGTCRVYDKVRDVRHEISSLDLFVP 189 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + + + V + A K ++ L Sbjct: 190 ------FTSSLLRDNEKQVQPSLDMIINGTPFALKGHTLPFNQSLKTQFDFSLKDAQLA- 242 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 + + L E + SG S + + + ++SG I++ ++ + Sbjct: 243 --EYWPYLPIYETTELKSGSLS-SDLVLSFERGDTILPRVQISGKANITNFDLAARK 296 Score = 42.6 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 34/285 (11%), Positives = 85/285 (29%), Gaps = 40/285 (14%) Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG- 120 V + + K G + G +M + L + + + +++ + KG Sbjct: 499 IRVNVDGLDLQPKGGGKTLIGLGGFAMNNGTVDLQEKSVFIDSIDLNKLLIRLMRDKKGI 558 Query: 121 ----------------------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQES-- 156 V L + + +++ D+ + Sbjct: 559 DLIKQIEQHQKNAKNVGVPVKQQEEGADSADAEGETWKVALNRFQLSESGVELTDRAATK 618 Query: 157 DQVYFLSDLNLQISARFLNIISPLSID-----SIKGSVIAEGTGNFDNKRSAFKITANFP 211 V +SD+ + ++ PL ++ + +GS+ +G + + + Sbjct: 619 KTVTSISDIKIGVNGLTFPEEKPLKLNLSALINKRGSIKIDGQAGPQSLKGKGSVQLRKL 678 Query: 212 -AKNKAISLKIQLFPLAYPIIIDLFGN---LFWNEKQPIYSGVFSVAGDFSKLLN----- 262 ++ L Q+ +D+ GN NE Y+G + + Sbjct: 679 RLRDFNGYLPPQMQMNIARGHVDVRGNWDFSAANEPVAGYTGKVQLKDLLIRDNQGNKQF 738 Query: 263 LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 L R +F+ + V++ + + N ++D + Sbjct: 739 FHLEDLAVR-EIDFRSAPLKVKVGSIAVLAPKANLEREQDGTFNI 782 >gi|91781875|ref|YP_557081.1| hypothetical protein Bxe_A3970 [Burkholderia xenovorans LB400] gi|91685829|gb|ABE29029.1| Putative membrane protein [Burkholderia xenovorans LB400] Length = 1430 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 43/325 (13%), Positives = 96/325 (29%), Gaps = 32/325 (9%) Query: 2 LRRVL-IGLGFLFSVVLVG---AFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55 LRR + L + V + + FR E + + + ++ Sbjct: 59 LRRTFHVVLAIALVLYFVATGLFLALRYVVLPRADSFRPRIEAIVSEKLHAQFSIGKLAP 118 Query: 56 IHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 P + ++ I ++ I + + L + + +DQP + Sbjct: 119 YWSGFQPGLDVTNLVIRDRDG-KTALTIPHATATLSWKSLWQFHPALSSLIVDQPDVLVA 177 Query: 116 LSSKGVSNWFQRKSTM-------DMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLNL 167 SS GV + + + I V+GG ++ D E + L D+ + Sbjct: 178 RSSDGVLSVAGVPVPTRHSGNDVLTTWLLRQQAIVVRGGVLRWRDAEHAAPELALRDIRI 237 Query: 168 QISARFLNIISPLSIDS----IKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAISLK 220 I + L + + G + T + L Sbjct: 238 AILNDGYDHRLALQAPAEGHVLNGPLDFRTHFRHAPLSAIGKPINWTGQVYVSTGPVDLP 297 Query: 221 IQLFPLAYPI-----IIDLFGNLFWNEKQ-PIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274 + +PI ID + + + + SG + A ++ + S Sbjct: 298 TLARYVNFPIETFAGRIDNAIWIDFADGRMKSASGQLTGADVAMRVRPTQPKLLVPVASF 357 Query: 275 NFKIS----DGNVRISRYKLQSILP 295 +++ D +++S++ + P Sbjct: 358 MWRLEAEAGDYKLQLSQFHAELGQP 382 >gi|171321425|ref|ZP_02910374.1| conserved hypothetical protein [Burkholderia ambifaria MEX-5] gi|171093290|gb|EDT38489.1| conserved hypothetical protein [Burkholderia ambifaria MEX-5] Length = 1398 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 97/331 (29%), Gaps = 37/331 (11%) Query: 2 LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55 LRRV + V + + +FR ER + + ++++ G + Sbjct: 24 LRRVFRVTLAVGIGTYFVASASFLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GKLS 82 Query: 56 IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 H P V ++ I ++ + + ++ LL + + +D P L Sbjct: 83 PHWSGMQPGVEVANLIIRGRDGRI-ALSVPHATAALSWMSLLRLSPALSSLIVDHPDLVV 141 Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166 ++ G + + + E I ++ G ++ D + D LS + Sbjct: 142 ARAADGSLSVAGVGVATTHGGNDTFGTWLLKQEAIVLRNGTLRWRDAQHDAPELALSGIR 201 Query: 167 L----QISARFLNIISPLSIDSIKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAISL 219 L + +P + + G + T + + L Sbjct: 202 LAVLNHGRVHKAALQAPANGTLLLGPLDFRARFRHKPLQPIGKPTNWTGDAYLSTGPVDL 261 Query: 220 KIQLFPLAYPI-----IIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270 + L P+ ID + + +G + G L L Sbjct: 262 QTLGRYLDIPLTIHAGRIDNAIWATFEDGHLRSAGG-DLQGADVVLRVRPTQPRLDVPTV 320 Query: 271 RLSGNFKISDGN---VRISRYKLQSILPNSS 298 + ++ G + ++R+ + P Sbjct: 321 GFGWDMALNAGRDYTLHLTRFNAELGQPPLP 351 >gi|298372725|ref|ZP_06982715.1| hypothetical protein HMPREF0156_00771 [Bacteroidetes oral taxon 274 str. F0058] gi|298275629|gb|EFI17180.1| hypothetical protein HMPREF0156_00771 [Bacteroidetes oral taxon 274 str. F0058] Length = 1037 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 51/399 (12%), Positives = 120/399 (30%), Gaps = 37/399 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------ 55 L+ LI +G L +V++V F+ + + K I + ++ Sbjct: 5 LKITLISIGSLLAVLVVAILIAVWFVFTPERLTPI---VRNALQKNIKCQSDLREVELTF 61 Query: 56 IHILPFPSVFFKDIRIDQK---EDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPH 111 P V D+ + ++ L + L E+ + ++ + Sbjct: 62 FSTFPNFGVKLSDVVLINPIKGSASDTLLRVNNLVGKVNLTKFLFDKELIINEIILQNGF 121 Query: 112 LNFYLSSKGVSNWFQRKSTMD---------MIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 +N Y S G SN+ S + +++I ++ + D++S + Sbjct: 122 VNIYTDSTGTSNYDVFPSDTTKKDTTKFKMPFDFIDIKRIEIERLSVLYTDKQSGIDSKI 181 Query: 163 SDLNLQISA--RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 +LNL ++A N + + + T + D + + I Sbjct: 182 KNLNLSLAATLNQENGNADFGLAADDVWFYMADTASLDVSMKKLSLDIDGSKNKDKIEGT 241 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN---LELSAKKSRLSGNFK 277 ++ A + + + Q + F + N +++S K + G Sbjct: 242 MKSGITALNVTKGTDKLMVNRDLQIELPLAVDIKKLFVDIKNGGFIDISNNKITIEGWIH 301 Query: 278 ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEE 337 + + + I ++ K + L + + D+N + + + Sbjct: 302 KLEKLIDMD------IKFDTDWLNIGKIISLLPD--NLKKTISDMTIEGDINVSGEVQGK 353 Query: 338 --EKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374 + D ++K D Q F+ Sbjct: 354 LQGDTIPSIMANIDIKHTKYSQKGLPMTLRDINGQIQFN 392 >gi|149200338|ref|ZP_01877357.1| putative ATPase involved in pili biogenesis [Lentisphaera araneosa HTCC2155] gi|149136574|gb|EDM25008.1| putative ATPase involved in pili biogenesis [Lentisphaera araneosa HTCC2155] Length = 1378 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 43/408 (10%), Positives = 116/408 (28%), Gaps = 44/408 (10%) Query: 1 MLRRVLIGLG---------FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK 51 ML+++ LG + F I R +Q + ++ + + ++ Sbjct: 1 MLKKISPYLGQTKKTRRIRITLISCVFFYFIFLGLIAPVIVRSQATKQISELIQRPVQIE 60 Query: 52 GGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110 KI I PF S+ K I + ++ + E + E + + ++ + +P Sbjct: 61 ---KISINPFCNSISIKKFAILETDN-NEFLSWEEFYINFELSSIFTFSWNFNEIALKKP 116 Query: 111 HLNFYLSSKGVSNWFQ-----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159 + + + N+ I + ++ V G++ I D + Sbjct: 117 QVKVSRLTAQLFNFSDIIETLNQLPKQEVDEPTPIPPIFIKSFTVTDGQVLIKDLSRGKE 176 Query: 160 ---------YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF 210 +S+ + +I+ N + + +G N S + N Sbjct: 177 KSLEVPSIDLSISNFHTKINKDKNNHYDFRILTEHNAGLHWQGQVNISPLSSKGTLKING 236 Query: 211 PAKNKAI-----SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 L + + ++ + + G F++ + + Sbjct: 237 AKIKNIYDAFADELPFTIVSGDIGLELNYTTSFDKKLSFQVSDGQFTLDQFNVEYKDKSP 296 Query: 266 SAKKSRLSG---NFKISDGNVRISRYKLQSILPNSSTDEDNK-TKVSQDEENLLNFSENG 321 + + L ++ ++ N+ + + S+ E + E + + G Sbjct: 297 LIQLNALKISDVSYDLNSQNLIVPLIEFTDTNAYSTLLETGLPKSLRLTELDAFTQALIG 356 Query: 322 AESMHDLN-ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 + N + ++ + + K + Sbjct: 357 EQKAPQTNASSPSNQKNGISLAKSPINFVIKEVRGEKLNAYFTDESTQ 404 >gi|218885319|ref|YP_002434640.1| hypothetical protein DvMF_0212 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756273|gb|ACL07172.1| hypothetical protein DvMF_0212 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 1217 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 3/127 (2%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR + I L + V G + +D T + G V+GG+++ P Sbjct: 3 LRPLPIILCLVLLAVGGGYAALRHLVDSDAAARQLGESLTALTGHASRVQGGVRVVFDPD 62 Query: 62 PSVFFKDIRIDQKE---DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 P+V +D+ +DQ + ++ PL SG + V + + +P L Sbjct: 63 PTVVARDVIVDQAPPFAGQAPLLRMAEARFNLRLAPLFSGRVEVRGVEVARPQLVLLADG 122 Query: 119 KGVSNWF 125 +G + W Sbjct: 123 EGRNGWD 129 >gi|22299918|ref|NP_683165.1| hypothetical protein tll2375 [Thermosynechococcus elongatus BP-1] gi|22296103|dbj|BAC09927.1| tll2375 [Thermosynechococcus elongatus BP-1] Length = 1567 Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 40/360 (11%), Positives = 103/360 (28%), Gaps = 23/360 (6%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70 L ++ + T + + + +Q + + + + + + + Sbjct: 22 GLVALGAIAVGTRTWWFVRYELAPEIAQQLQQRLNRPVEIGSVEDVGLN-VVRFGSSAVP 80 Query: 71 IDQKEDGSFESK---IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127 E+GS E I + + LL+G+ D+ + QP L ++G + Sbjct: 81 SYTPEEGSPELDHALINSIEVAFNPWQLLTGQKLDIDLTLHQPQLTVVQDAQGRWWRTEV 140 Query: 128 KSTMDMIHNVILEKI--HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 K + + L +I V+ G + ++ Y L + + + L+ + Sbjct: 141 KPPEEDPTFLQLHQISVRVRDGSV-LVQPFQRPAYLLRQIEGEWTLTPDRQNFALAGQ-L 198 Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII---DLFGNLFWNE 242 +G + G + + + + I L + L I + L G+L Sbjct: 199 EGQLAGGGQWRLQGDWNPSQEKGQLDLRFRKIPLALGNEILPKTIRVQGGQLEGHLRVRL 258 Query: 243 KQ---PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 P +G + + + K + + + L+ + N Sbjct: 259 PLPETPQVTGQIWLRDGSLRTTFVPQDIKALQAHVQLQGHQAKLHY----LRGAIANVRW 314 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359 E N + + + ++ ++ + + Sbjct: 315 QAVGTVS----PERGWNINAQVSSFDLVP-ALRALQMTPPVALRGQVEVPTLRLQGHLEN 369 >gi|308271028|emb|CBX27638.1| hypothetical protein N47_H24600 [uncultured Desulfobacterium sp.] Length = 867 Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 92/251 (36%), Gaps = 25/251 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++L+ G + ++ L+ F +P FI+ D + +K+A+ G +K+ IL Sbjct: 1 MKKILVTTGIVLALFLLVLFLLPFFININDIVAKQIPVIEKKIHRKVAI-GDVKLTILSG 59 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 ++ I D +IE L + LPLL EI + + I++P + +++ Sbjct: 60 LGAKINNVSISNNPDFKQQNFVRIEKLKANVKLLPLLKKEIMISSVSIERPSVVIERNAQ 119 Query: 120 GVSNWFQ-------------------RKSTMDMIHNVILEKIHVKGGRIKII---DQESD 157 G N+ K + + N+ + KI ++ G K D ++ Sbjct: 120 GKMNFSDMIVSAKTEKEAKNAPAATETKDPLSTLENIQISKISIREGNFKFFDSSDAKAS 179 Query: 158 QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217 + L NL I L+ + +D+ + + Sbjct: 180 KEIALDKFNLLIKGVSLSQKIYIDLDTDIYASPKAVHVALSGDLGPIGKNPEPDNIPVDL 239 Query: 218 SLKIQLFPLAY 228 +L + ++ Sbjct: 240 TLSLSDINFSH 250 >gi|325300349|ref|YP_004260266.1| AsmA family protein [Bacteroides salanitronis DSM 18170] gi|324319902|gb|ADY37793.1| AsmA family protein [Bacteroides salanitronis DSM 18170] Length = 824 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 55/418 (13%), Positives = 119/418 (28%), Gaps = 45/418 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI 58 +++ L G V+L+ +P F+ E+ K + + G + I + Sbjct: 1 MKKALKIAGITVGVILILLLVLPF-----AFQGKIEQLVKQEGNKMLNAQFDFGALNISL 55 Query: 59 ---LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112 P SV +D + + L+ L L + + I+ + Sbjct: 56 LRNFPSASVTLEDFYLKGAGAFENDTLIQAGELTAAVNLLSLFGDSGYDISKIIIEDTKV 115 Query: 113 NFYLSSKGVSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 + G NW Q + L+K+ VK + D+++ Sbjct: 116 KAIVLENGQPNWDVMKASAETDTVQESPAESSPIRIKLKKLSVKDLSVSYDDRQAGMYAA 175 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221 + +L S F + + + ++ S+ G +A K N A + Sbjct: 176 IENLKATCSGDFGSERTLVDLELETPSLTYRTGGVPFLNHAALKADMNVAADLVNKKFTL 235 Query: 222 QLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA------------K 268 Q ++ I +++ G + + K L + A Sbjct: 236 QDNSISLNAIKLNIDGWAAMQKDGMGMDIKLNTNEVGFKELLSLIPAIYAKDFQDLKTDG 295 Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNS-------STDEDNKTKVSQDEENLLNFSENG 321 K+ L+ K + ++ ++++ + N+ D + + N Sbjct: 296 KASLTAFAKGTLTQDQMPQFEVALNVENAMFRYPSLPAGVDGINISATVKNPGGNIDATE 355 Query: 322 AESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 K D+Q + + D E+ S + I Sbjct: 356 VTISPFDFTLAGNPFSLKAIVKTPTSDPDLQATAKGTLDLGKIKDVYPLEDMSLNGTI 413 >gi|311105317|ref|YP_003978170.1| hypothetical protein AXYL_02131 [Achromobacter xylosoxidans A8] gi|310760006|gb|ADP15455.1| hypothetical protein AXYL_02131 [Achromobacter xylosoxidans A8] Length = 1206 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 34/339 (10%), Positives = 93/339 (27%), Gaps = 39/339 (11%) Query: 12 LFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKD 68 ++ VV +G V ++ +R E A+ +G ++ + G I+ + P + Sbjct: 4 IYGVVALGLLGVRYWVLPRVDQWRPQIEAYASQALGSRVTI-GSIQANWHGLNPKLDLTS 62 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128 +++ ++ + +S + +L+ ++ + +++P L + Sbjct: 63 VQVYD-DEVDPVLSLPSVSAVLAWRSILTLSPKLLRLQVERPELTLRRDPANHLWVAGQD 121 Query: 129 ------------STMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLN 175 + ++ ++G I+ D+ L+ ++L L+ Sbjct: 122 IDLNASDQRSDLDHPALRWLSAQRELRIRGATIRWQDELRGAPELTLTSVDLLARNGSLS 181 Query: 176 IISPLSIDSIKGSVI-AEGTGNFDNKRSAFKITA---------NFPAKNKAISLKIQLFP 225 L + E G F+ + ++ + Sbjct: 182 HRFVLKAAADGALARNVELRGEFNRSLFTVNAANPGNWGGQLYAQLDDVEPLAWQPWFEV 241 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 A + L + A + A+ + Sbjct: 242 PAVAGRLSGRAWLQLERGKFT-DLTADAAARGLQWTATPQGAQAPGFKAGYA-------- 292 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 + ++Q LP D ++ S + Sbjct: 293 -QVRIQ-GLPGDFIQLDGVPLARSPGAPAVSVSGKAEQL 329 >gi|332525840|ref|ZP_08401981.1| hypothetical protein RBXJA2T_08310 [Rubrivivax benzoatilyticus JA2] gi|332109391|gb|EGJ10314.1| hypothetical protein RBXJA2T_08310 [Rubrivivax benzoatilyticus JA2] Length = 1194 Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 38/268 (14%), Positives = 95/268 (35%), Gaps = 26/268 (9%) Query: 29 WTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS---FESKIE 84 + E++ + ++G+ + V ++ P ++ + +++D + +++IE Sbjct: 34 PRVVKTQLEQRGSALLGRGLHVA---EVSFSPLTLTLELRGLQLDAAAGDAGAGPQARIE 90 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-------QRKSTMDMIHNV 137 L++ LL+G V + +D P L ++ G + Sbjct: 91 RLALNLSARSLLAGLPIVEALQVDAPSLRLARTAAGRYDVDDLIARLTAPSPPDATPARF 150 Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197 L + V+GGR+ D+ + + + ++ + L + + + + V + Sbjct: 151 ALYNLRVQGGRLDFDDRPAGRQHVVNAVELALP------FVSNAPEQVDVDVEPRLSLRL 204 Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGD 256 D + + A ++ L ++L LA P+ L +L + + SG Sbjct: 205 DGSALTLQGRSRPFAADRESLLTLELPSLALDPLWPYLPHSLPLRGQGGVLSGRL----- 259 Query: 257 FSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + L G +S + Sbjct: 260 DIRFAQPAGKPPELALHGPLTLSSIALA 287 Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 34/264 (12%), Positives = 83/264 (31%), Gaps = 24/264 (9%) Query: 37 ERQATLIVGKKIAVKGGIKIHIL----PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92 ++ G+ V G +++ + R+D G L + Sbjct: 453 QQLLQTPTGR---VDGRVELDWAAGHDGRLMLRLPQARVDGLRWGRQALA--TLELTGLG 507 Query: 93 LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ-----------RKSTMDMIHNVILEK 141 L + + + +D+P L+ ++G N ++ +L + Sbjct: 508 ADLRARRLEAEALRLDRPALDLERDAQGRWNVLAMLRPPAAGAAPATASAGPAWQAVLRR 567 Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE-GTGNFDNK 200 + + GGR+ + D + L ++A L + ++ S+ + Sbjct: 568 LKIDGGRLHLSDAAAAAPVGFGVQALALTAGELRWPATAQPSPLELSLQLAPDRVSGAPA 627 Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL 260 ++ A + ++ + +L P+ + +W + P+ + Sbjct: 628 PVPGRLQAQGTLALEPLAWRGRLSLSRLPLQV---AEPYWRAQLPVQVRRAELGWRGDTE 684 Query: 261 LNLELSAKKSRLSGNFKISDGNVR 284 L L L GN ++D V+ Sbjct: 685 LRLTPGGPAFSLRGNAMLADLRVQ 708 >gi|171060190|ref|YP_001792539.1| putative transmembrane protein [Leptothrix cholodnii SP-6] gi|170777635|gb|ACB35774.1| putative transmembrane protein [Leptothrix cholodnii SP-6] Length = 1450 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 41/392 (10%), Positives = 98/392 (25%), Gaps = 36/392 (9%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIH--ILP 60 +L + S+V+ T+ I +R + E ++ +G + + G + + + Sbjct: 25 LLRAAIGVASIVVAAWLTLQWGILPRLDHWRPEIEAWSSRSLGLPVRI-GTLAVRGDLW- 82 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-----SGEIRVFDMYIDQPHLNFY 115 P++ +D+++ ++ + LL + + + L Sbjct: 83 SPTILVRDLQLLAANG-QPGLRLADVEAVITPGSLLPRSLTDWRPHLRRLSLRGADLAVQ 141 Query: 116 LSSKGVSNWFQRKSTMDMI--------HNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLN 166 G + ++ + + D LSD+ Sbjct: 142 RLDDGRWQLAGLVLADGDGSTARRLVDWLLRQGEVVIAASTLTYADTRLGPAPARLSDIE 201 Query: 167 LQISARFLNIISPLSIDSIK---GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 L R L + + G + AE + IQ Sbjct: 202 LLWRNRLGRHRLTLGLSAPPDWGGPLRAELDLR---EPLLAAAGLWRSGDWARWRTDIQA 258 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 A + Q + +G G+ + L L + R S ++ Sbjct: 259 QLPAVALR-----RAQALLPQSVTNGRSWQGGNGALSLALRRDQGEWR-SARITADLRDL 312 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343 ++S L + ++ L + + + Sbjct: 313 QLSPAPGAEPLRIAQLAGTLVAQID---ARSLQLQASDWQLQLADGAAPSATRTTAPASS 369 Query: 344 DDLKKDDIQYSVNKKEEKDNSHDKENQENFSG 375 L D + + + + D Sbjct: 370 WSLNWDRSDAAQARHTLQADRLDIATLATLVP 401 >gi|33862711|ref|NP_894271.1| hypothetical protein PMT0438 [Prochlorococcus marinus str. MIT 9313] gi|33634627|emb|CAE20613.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313] Length = 1478 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 44/373 (11%), Positives = 100/373 (26%), Gaps = 26/373 (6%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R ++ L V + V + R E+Q + +G + + + Sbjct: 15 RPAVLLLTSSLVVWVGADRVVAALL--ERLRPQLEQQLSKPLGHPVKIGVYQGLRPW--- 69 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + + + + GL++ + L V + ++ L + KG Sbjct: 70 GMAIGPTEVLPGSHDDSTASLSGLTISLAPMASLFRLRPVAVLTLEGSRLTLRRNHKGFY 129 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS-DLNLQISARFLNIISPLS 181 W S + V L+ + R++I + DL L ++ L Sbjct: 130 -WVPGPSKGEPPPKVDLQLRLTQPARVRIEPANLEFTATTRADLQLAEGWANGSVQFVLP 188 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +G +G G +D + + L P+ I + N Sbjct: 189 ---DRGRFFLKGRGRWDRLELQAHARLDQISLEPLQGLLPGTLPMQMQGQIGGDLQVSLN 245 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 + + G S+ L+ S +++ + + +S Sbjct: 246 QGRMGCKGALSLVRFQLAGGPLKKSLS--SREAKINCRQDRLQLPLSQWRYGPWTAS--L 301 Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361 +++ + +N+ + N + ++ S Sbjct: 302 KGGARLN-----------HSYNLDLKVNQRQ-QGHAFQARINGPWHEPNLHASGRWTLAP 349 Query: 362 DNSHDKENQENFS 374 D Q N Sbjct: 350 KIPVDGPLQLNLQ 362 >gi|222055688|ref|YP_002538050.1| hypothetical protein Geob_2599 [Geobacter sp. FRC-32] gi|221564977|gb|ACM20949.1| conserved hypothetical protein [Geobacter sp. FRC-32] Length = 546 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 102/336 (30%), Gaps = 33/336 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV-GKKIAVKGGIKIHILPF 61 ++ L+ + + V V + F+D R E+ + G I++ G + + ++ Sbjct: 26 KKALLWVFSILLFVAVALYVASFFLD-EPLRRYTEKTVNKRLKGYSISLSG-MHLQLVGG 83 Query: 62 PSVFFKDIR-IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 +V ++ + + I + LL G + + ID+P ++ + Sbjct: 84 -TVTLDGLKVLQDAHPVPPIAVIPSTKGSISWRDLLYGRVVA-TIGIDRPKMHID-LQQL 140 Query: 121 VSNWFQRKSTMDMIHN--------VILEKIHVKGGRIKIIDQESDQVYFLSDLNL---QI 169 S ++ D + + ++ I +D+++ + L++LN+ I Sbjct: 141 KSEMTSKEKLKDRGWQEAIEAVFPLKINNFVIRNASITYVDKDAGKPLHLTNLNVTAGNI 200 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 + S + + G G FD + P + K++ PL Y Sbjct: 201 RNVRVKDKVYPSSLHMDTVIFGSGRGQFDGNANFLS----QPVPGIKGTFKLEGIPLDYF 256 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 + NL + SG + + + + + + Sbjct: 257 KPVASHINLSVRKGVLSLSGNMEYSPTIASVQ-----------VKDLQFKGLEMDYVHSA 305 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 + + K + + + Sbjct: 306 ATAKAEKKRAKKVGKAAGKVSNKPEIQLRIDRMRLT 341 >gi|302879973|ref|YP_003848537.1| hypothetical protein Galf_2780 [Gallionella capsiferriformans ES-2] gi|302582762|gb|ADL56773.1| hypothetical protein Galf_2780 [Gallionella capsiferriformans ES-2] Length = 1030 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 83/309 (26%), Gaps = 32/309 (10%) Query: 6 LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65 L G + SV+L +P I + E+ T G + + PF Sbjct: 13 LTSTGLILSVILFSWLVLPHLI-----QSQAEKYFTDKTGHHLTMATP---SFNPFELSL 64 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW- 124 + DG L + L G + ++ +D L +G NW Sbjct: 65 RLSGLRLTEPDGKPLLAFRELLVNFSSASLYRGALVFDNIKVDGLEATAVLLPEGKLNWS 124 Query: 125 --------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS----DLNLQISAR 172 + +T + + I + G ++ D + DL L + Sbjct: 125 GLITALQSPETPATDAPLPRFDIRHITLSGTQVDFTDNRLKPAFTTRIEPMDLELNELSS 184 Query: 173 FLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKIT---ANFPAKNKAISLKIQLFPL 226 + + ++ +G D + + N + + + Sbjct: 185 LPGDQGKFRLSATTSFGARLLWQGQVRLDTLTANGNVAVSEVNLAQLSGYFKDSLPVKLS 244 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGV-FSVAGDFSKLLNLELSAKKSR----LSGNFKISDG 281 I + +++ ++ + +L + G F ++ Sbjct: 245 QGVAGITTDYRVGYDKGALSFNLDHLNAKLSGIQLAYPAGPGVSIKSIEVREGRFDLAKN 304 Query: 282 NVRISRYKL 290 + + + Sbjct: 305 RLLLDSLNI 313 >gi|39937739|ref|NP_950015.1| AsmA family protein [Rhodopseudomonas palustris CGA009] gi|39651599|emb|CAE30121.1| possible asmA protein [Rhodopseudomonas palustris CGA009] Length = 605 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 33/264 (12%), Positives = 76/264 (28%), Gaps = 19/264 (7%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR--IDQKEDGSFESKIE 84 I + + G ++ + G + + P ++ D+ + KI Sbjct: 26 IPAGALTGAIQSRIERDTGYRVTIAGTGTVRLFPAVALTLHDVSAELPGGRTTDPRLKIA 85 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--QRKSTMDMIHNVILEKI 142 + L+S R+ ++ + P L+ L G + +E+I Sbjct: 86 TVRAELPLTSLISATPRLTELTLISPELHLPLLR-GRDEAAATPAPARKSSAELADIERI 144 Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202 V+ G + + + ++ + I + G + A G+ Sbjct: 145 VVQDGVVVMTSTADNIERRIAGIQADIEREDAD-----------GPITASGSATLGRSPL 193 Query: 203 AFKITANFPAKNKAISL-KIQLF-PLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSK 259 +F++T PA +K L + L P + +G + Sbjct: 194 SFELTTTPPADDKQPMLVDLTLDAPGLLTSRLSAKAEARLRGTTFAVNGISGKLGDAPFN 253 Query: 260 LLNLELSAKKSRLSGNFKISDGNV 283 A K + + ++ Sbjct: 254 GWASVDVAGKPVVKLDLDFQRLDL 277 >gi|332667995|ref|YP_004450783.1| AsmA family protein [Haliscomenobacter hydrossis DSM 1100] gi|332336809|gb|AEE53910.1| AsmA family protein [Haliscomenobacter hydrossis DSM 1100] Length = 1055 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 108/303 (35%), Gaps = 30/303 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------ 55 ++R+L+ LG L +++ AF +P F+++ +A + + K Sbjct: 1 MKRLLLALGVLLVLLIGTAFAIPYL-----FKDEILAKAKTAINANLNAKVDFSDASLSM 55 Query: 56 IHILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSG--EIRVFDMYIDQPH 111 + P + + ++ + + + ++ +++ +F + +G I++ + +D+P Sbjct: 56 LSTFPNLGLSMDNFTVEGIDTFAGVKLADVKKMTLVLDFWSVWNGMNPIKIKSVNVDEPV 115 Query: 112 LNFYLSSKGVSNWFQRKS-----TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 ++ ++ +G +N+ K + + LE + G + D +N Sbjct: 116 IHVLVTKEGAANYNVAKPSDDTSSTTTDFKIDLEDYRINNGSLVYDDASVGAYVSAKGIN 175 Query: 167 LQISARFLNIISPLSIDSIKGSVIA--EGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 S +I L + S+ G +N ++ +LK + Sbjct: 176 HSGSGDLTAMIYDLDTQTKIDSLTVTYGGISYLNNAATSLDAVFQVDQNQSKYTLK-ENN 234 Query: 225 PLAYPIIIDLFGNLFW-NEKQPIYSGVFSVAGDFSKLLNLELSAK------KSRLSGNFK 277 + + + G + N+ + F + + L + + ++ G F Sbjct: 235 LVLNVLSLQGDGWVQLPNDDDVVMDLNFKAPQNDFRNLFSIIPGAYLAGYEQVKVDGKFD 294 Query: 278 ISD 280 ++ Sbjct: 295 LNG 297 >gi|260220191|emb|CBA27483.1| hypothetical protein Csp_A02500 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 1262 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 39/376 (10%), Positives = 114/376 (30%), Gaps = 33/376 (8%) Query: 29 WTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSM 88 + + + + ++G+++ + G I + ++ + + + ++ + + Sbjct: 34 PPLVKSQAQSRLSELLGRQVTI-GSIAFSPW-SLELTVREFAVATADGKGVQFSLDRVYV 91 Query: 89 RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILE 140 AE L + + +D P + G + + + Sbjct: 92 DAEAQSLFRLAPVIDAVTVDAPKVQLTHLGAGRYDIDDIIQRLNKPDDTPAGSTPKFAVY 151 Query: 141 KIHVKGGRIKIIDQESD--QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT---G 195 + + G + D+ +V+ L DL + + + S + + + G+ Sbjct: 152 NLTLNQGSVDYTDRAGGAERVHTLRDLQISLPFLSSFDSKRDVLVSPRLAFVLNGSHFDS 211 Query: 196 NFDNKRSAFKITANFPAKNKAISL---------KIQLFPLAYPIIIDLF-GNLFWNEKQP 245 + A + K + L + + P + + D+ G + + Sbjct: 212 EAEGTPFAQSRKGDAELKISQLDLAPYLPYLPANLPVKPQSAVVDADIKLGFVQSPQTAV 271 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLS---GNFKISDGNVRISRYKLQSILPNSSTDED 302 SG +V+ + + L + + + +V++S L + + N D Sbjct: 272 TLSGSVTVSRLAVQDTKGKPLFSADSLQVGLADVRPLERSVKLSGITLNAPVLNVVRAAD 331 Query: 303 NKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN-DDLKKDDI---QYSVNKK 358 + + + + D ++ E L+ D + SV+ Sbjct: 332 GSLNL-LPPAPAKQTAPDNVAARADSTGAGGQKDAEIPAPTPWALQLDTLALKDASVDWI 390 Query: 359 EEKDNSHDKENQENFS 374 ++ + +F Sbjct: 391 DQVTAPATRLGLRDFQ 406 >gi|192293520|ref|YP_001994125.1| AsmA family protein [Rhodopseudomonas palustris TIE-1] gi|192287269|gb|ACF03650.1| AsmA family protein [Rhodopseudomonas palustris TIE-1] Length = 602 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 32/263 (12%), Positives = 76/263 (28%), Gaps = 17/263 (6%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR--IDQKEDGSFESKIE 84 I + G ++ + G + + P ++ D+ + KI Sbjct: 26 IPAGALTGAIQSMIERDTGYRVTIAGTGTVRLFPAVALTLHDVSAELPGGRTTDPRLKIA 85 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG-VSNWFQRKSTMDMIHNVILEKIH 143 + L+S R+ ++ + P L+ L + + + +E+I Sbjct: 86 TVRAELPLTSLISATPRLTELTLISPELHLPLLRQRDEAGGTPAPARKSSAELADIERIV 145 Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203 V+ G + + + ++ + I + G + A G+ + Sbjct: 146 VQDGVVVMTSTADNIERRIAGIQADIEREDAD-----------GPITASGSATLGRSPLS 194 Query: 204 FKITANFPAKNKAISL-KIQLF-PLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKL 260 F++T PA +K L + L P + +G + Sbjct: 195 FELTTTPPADDKQPMLVDLTLDAPGLLTSRLSAKAEARLRGTTFAINGISGKLGDAPFNG 254 Query: 261 LNLELSAKKSRLSGNFKISDGNV 283 A K + + ++ Sbjct: 255 WASVDVASKPVVKLDLDFQRLDL 277 >gi|124023543|ref|YP_001017850.1| hypothetical protein P9303_18431 [Prochlorococcus marinus str. MIT 9303] gi|123963829|gb|ABM78585.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9303] Length = 1478 Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 88/322 (27%), Gaps = 16/322 (4%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R ++ L V + V + R E+Q + +G + + + Sbjct: 15 RPAVLLLTSSLVVWVGADRVVAALL--ERLRPQLEQQLSKPLGHPLKIGAYQGLRPW--- 69 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + + + + GL++ + L V + ++ L + KG Sbjct: 70 GMAIGPTEVLSGSHDDSTASLSGLTISLAPIASLLRLRPVAVLTLEGSRLTLRRNHKGFY 129 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS-DLNLQISARFLNIISPLS 181 W S + V L+ + R++I + DL L ++ L Sbjct: 130 -WVPGPSKGEPPPKVDLQLRLTQPARVRIEPANLEFTATTRADLQLAEGWANGSVQFVLP 188 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +G +G G +D + + L P+ I + N Sbjct: 189 ---DRGRFFLKGRGRWDRLELEAHARLDQISLKPLQGLLPGTLPMQMQGQIGGDLQVSLN 245 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 + + G S+ L+ S +++ + + Sbjct: 246 QGRMGCKGSLSLVRFQLAGGPLKKSLS--SREAKINCRQDRLQLPLSQWRYG----PWTA 299 Query: 302 DNKTKVSQDEENLLNFSENGAE 323 K + L+ N + Sbjct: 300 SLKGGARLNHSYNLDLKVNQRQ 321 >gi|124003476|ref|ZP_01688325.1| putative outer membrane protein [Microscilla marina ATCC 23134] gi|123991045|gb|EAY30497.1| putative outer membrane protein [Microscilla marina ATCC 23134] Length = 1097 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 111/351 (31%), Gaps = 41/351 (11%) Query: 31 DFREDFERQATLIVGKKIAVK----GGIKIHILPFPSVFFKDIRIDQKED--GSFESKIE 84 D + + + V + G P +V +D + K+ G + ++ Sbjct: 46 DIKAKIDEEIAKSVNAHVYFDIDKFGLSMFSNFPNITVSMEDFGVVGKDKFKGDTLTAVK 105 Query: 85 GLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI--------- 134 + + +L S +I+V +Y+D P + + G +NW K+ Sbjct: 106 EFEVEVDVWSVLFSDKIQVRGIYLDSPKIYAKVLKDGTANWDIMKADTTQKDEKKPEKDK 165 Query: 135 -------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187 NV +++ +K I D + ++ L + S F + L + Sbjct: 166 SDTTQTNFNVGIKRWKIKNADIVYADAATPMYASITKLTHKGSGNFTQAVFDLKTKTTVD 225 Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL-FWNEKQPI 246 + +NK+I + + L N NE Sbjct: 226 KIDFGYENV-------------RYVENKSIDVDLTLNMDMEKNKFTFKQNAIKINEFVFK 272 Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN--K 304 + G + G+ ++++ +AK++ + G V + Q + D K Sbjct: 273 FDGFVQMVGNDIN-MDIKYAAKENEFKNILSLVPG-VYTEMEEFQKMKTEGKFAFDGFVK 330 Query: 305 TKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV 355 ++ + + ++++ + + + K D++ +V Sbjct: 331 GTYNEKKYPAFGLNFKVSDALFQYPDLPTSVNNINIDVSVGNKTSDLEKTV 381 >gi|83816828|ref|YP_445027.1| hypothetical protein SRU_0893 [Salinibacter ruber DSM 13855] gi|83758222|gb|ABC46335.1| hypothetical protein SRU_0893 [Salinibacter ruber DSM 13855] Length = 921 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 41/282 (14%), Positives = 84/282 (29%), Gaps = 15/282 (5%) Query: 59 LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 LP P+V R+ E + + L++ PL +IR + ++ P + + + Sbjct: 2 LPAPAVRVSGFRLANAEGYGPAPAVEARALTVDVALWPLFLLDIRPTAVALEAPVVRYEV 61 Query: 117 SSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS---DL 165 G +N+ + + + V G R+ D+ + Q L L Sbjct: 62 GKDGATNFDDLGASDTTAAAGDESPLAGIPVSSFRVSGARMNYTDRSTGQALRLDFEAQL 121 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 + + + + + S++ + + G + +A + ++ L Sbjct: 122 SARPDGAAIRSEGTVDLRSVRALLPSVGPDTLVVQEAAATYDVRVAPSEGEVEVR-TLQL 180 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 P+ I G + QP F + + G + G V Sbjct: 181 DTAPVTIAADGTIAGLNAQPALDLAFETGRTDLAEIAAFAAVAGVNPRGTLALD-GTVAG 239 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 L S+T + V + LL D Sbjct: 240 PLADTTEGLALSATGRLAEAGVDYEGTALLRDLSADLSLTLD 281 >gi|88811883|ref|ZP_01127136.1| probable transmembrane protein [Nitrococcus mobilis Nb-231] gi|88790767|gb|EAR21881.1| probable transmembrane protein [Nitrococcus mobilis Nb-231] Length = 1252 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 105/321 (32%), Gaps = 17/321 (5%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKKIAVKGGIKIHILPF-P 62 +L G+ + V + + L + + F + E T + + +A+ + H++ F P Sbjct: 1 MLYGVAGVLVAVAIALTALRLALAYAPAFHGELEALLTQWLHRPVAIA-ALDAHLVGFTP 59 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNFYLSSKGV 121 ++ ++RI + + + +L + R ++ D+ + + G Sbjct: 60 TLVLHEVRIGGTSKHPADLATSRFEVSIDLGAMLRSLQPRFVELRADRLEVTLRRHADGR 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI--SARFLNIISP 179 + ++ S ++ ++ ++ +K+IDQ +++ LS L+ A + + Sbjct: 120 ISLGEQASDAGNRLFALISRLRLRDASVKLIDQRRGKIWRLSKLHAWFWHDAGDARLAAH 179 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSA---------FKITANFPAKNKAISLKIQLFPLAYPI 230 + E + + ++ + A+ L Sbjct: 180 FLPVQPHMAKRMELAVGWHGSPRSLAEVNGSGYLRLREARFGQIGAV-LSPVWSVPVVAG 238 Query: 231 IIDLFGNLFWNEKQP-IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 D L +P S S G + ++ G+++ +D + Sbjct: 239 QADAQVWLSVRGGRPERVSVDASAWGLELSGAEGTMRFRRLAGRGHWQRTDDGWNLDINA 298 Query: 290 LQSILPNSSTDEDNKTKVSQD 310 LQ P ++ V Sbjct: 299 LQLQRPGAAPGSPGNVSVRYA 319 >gi|94969501|ref|YP_591549.1| hypothetical protein Acid345_2474 [Candidatus Koribacter versatilis Ellin345] gi|94551551|gb|ABF41475.1| protein of unknown function DUF490 [Candidatus Koribacter versatilis Ellin345] Length = 1369 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 106/336 (31%), Gaps = 47/336 (13%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILP 60 R++ + ++ L D R Q G K+ + G I+ ++ Sbjct: 12 RKIRQAVYGSLVLLTFVCTGWYLTSDSFRELIRHRIINQLEDATGGKVEI-GRIQWNLA- 69 Query: 61 FPSVFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 + + I + + ++ + + L +I + ++ + P +N + Sbjct: 70 RLRIGIDSLTIHGLEPAGQAPLLQVRRIDANIRIVSFLQRQISLKNLNVSNPSVNLLVYP 129 Query: 119 KGVSNWFQRKS--------TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 G +N ++ MD + ++ + + V G +K+ ++ + SDL +++ Sbjct: 130 DGSTNQPTPRTRKAGIPTGPMDPLFDIAVRNLVVTNGLLKVNERRTPFDLAASDLTIRLG 189 Query: 171 ARFLNIISPLSID--------SIKGSVIAEGTGNFDNKRSAFKITAN-FPAKNKAISLKI 221 + I+ +F R++ ++ A ++ ++ Sbjct: 190 YQSNPEFYNGRIELGKFDAQYDDLRPFSLGAVFDFRLYRNSIEMRAAHIISERSELAFDG 249 Query: 222 QLFPLAYP-------IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL-- 272 +L A P IDL + + SG + G + LS L Sbjct: 250 KLTNFAEPRVEGNYTAKIDLRQIAAITRVKGVQSGSVELRGKGAFDAQRFLSNGNVTLLD 309 Query: 273 ---------------SGNFKISDGNVRISRYKLQSI 293 S N+ + + + L ++ Sbjct: 310 VGWSNPSVHVISVSGSSNYYVDRDKLAFDQVALNAL 345 >gi|312795182|ref|YP_004028104.1| hypothetical protein RBRH_01651 [Burkholderia rhizoxinica HKI 454] gi|312166957|emb|CBW73960.1| Hypothetical protein RBRH_01651 [Burkholderia rhizoxinica HKI 454] Length = 1442 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 77/305 (25%), Gaps = 20/305 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFT------VPLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55 LRRVL + + GA +F R E++ + + ++ + G + Sbjct: 31 LRRVLACCASVAIALYFGAAATYVGLRYVIFPQLDSLRPHIEQRISDTLHAQVHI-GRLT 89 Query: 56 IHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 P++ + I + + S + L + + ++QP + Sbjct: 90 GRWSGLQPTLDIDQLTIMGPDGQR-MLAVPTASATLSWRSLPRLAPVLSSLIVEQPEIFA 148 Query: 115 YLSSKGVSNWFQRKSTMDM-------IHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166 G + + I ++GG + D + L ++ Sbjct: 149 ERHPDGTYTIAGVRVDPRQHGNSALLHWLMTQRAIVLRGGVLHWSDAQRGLPTLTLRGIH 208 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 + I R L + + + S K + + L Sbjct: 209 VAIDNRGLIHRLGVQAQPDGRLLRGPLDLRARLRHSPLKPLTEPAGWTGTMFVSSGNLAL 268 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 + + + + + + S L + + + Sbjct: 269 PELARYT---DARLDAQSGTLDVAAWLDFASGEWSGARGALSGSALRLRMDPTLPRLDVP 325 Query: 287 RYKLQ 291 L Sbjct: 326 SIGLD 330 >gi|160900385|ref|YP_001565967.1| hypothetical protein Daci_4953 [Delftia acidovorans SPH-1] gi|160365969|gb|ABX37582.1| protein of unknown function DUF748 [Delftia acidovorans SPH-1] Length = 1281 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 36/287 (12%), Positives = 91/287 (31%), Gaps = 38/287 (13%) Query: 33 REDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFE------------ 80 + E+QA+ +G+++ V G ++ + +D+ I + + Sbjct: 45 KSQLEKQASAKLGRQVRV-GAVEFRPW-SLELTLRDLSIARSQAEGAAPESVPSSSSSPQ 102 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMD 132 +I+ + + A L + + +D P L S G + + Sbjct: 103 LQIDRIYVNASIQSLFRLAPVLDAIEVDAPVLRLTQQSLGHFDVDDVLARLAEPGDTPPS 162 Query: 133 MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE 192 L I ++ GR+++ D+ + + L L L++ + V+ Sbjct: 163 KPVGFALYNIALRDGRVELQDEVQRRQHMLEQLQLRLP------FISNLESKREIKVLPH 216 Query: 193 GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS 252 + + R + + + ++ + L + + G + SGV Sbjct: 217 LSFALNGSRFESSAQSTPFTEQRQTAVDLSLQGVDLTPYL---GYVPVTAPVKPRSGVLD 273 Query: 253 VAGDFSKLLNLELSAKKSRLSGNFKISDGNVR----ISRYKLQSILP 295 A E + R++G +S + + + + + Sbjct: 274 -ANLHISFEQAEQAV--VRITGEVSLSGAELHDRDGVPLLRFERLAA 317 Score = 62.6 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 47/367 (12%), Positives = 94/367 (25%), Gaps = 48/367 (13%) Query: 38 RQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS 97 QA V + + G + + D DG + E L+ + + L Sbjct: 281 EQAEQAV---VRITGEVSLS-----GAELHD------RDGVPLLRFERLAAVLKNVQPLQ 326 Query: 98 GEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---------------RKSTMDMIHNVILEKI 142 + + P + ++G NW S V L+++ Sbjct: 327 SVAELESVQWSAPEIFAARDAQGRINWTAMGGASSPDARPAAEKPASDAPQPWKVSLDRL 386 Query: 143 HVKGGRIKIIDQE-----SDQVYFLSDLNLQISARFLNIISPLSIDSI-----------K 186 V + D S +L+LQ+ + PL + + Sbjct: 387 SVAHATVHWRDAAPDAGKSGAALQARELSLQVRDIRWPLEQPLQLAASMQVQPESAGEGA 446 Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 + +G +K+ I+A A ++ L WN + Sbjct: 447 KPAELQLSGALTDKQGQLAISARQLPLQLAAPYLSAHIKPELTGLLSTDAGLGWNGSAMV 506 Query: 247 YSGV-FSVAGDFSKLLNLELSAKKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDNK 304 V K + +L ++ V + R LQ D + Sbjct: 507 VQVAGLGVEQLSLKDKAAPVDIAHLQLEQVQVNLASQQVSVGRLALQKPQLAVLRDAQGR 566 Query: 305 TKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364 Q + ++ D + + + + + D N + S Sbjct: 567 WMYEQWLPPASSAPA-SQDAGKDKSRPWGLKLQAVEVDGGAIALRDEAPVRNADSARTVS 625 Query: 365 HDKENQE 371 D + Sbjct: 626 LDLGSLR 632 >gi|332974205|gb|EGK11138.1| AsmA family protein [Kingella kingae ATCC 23330] Length = 705 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 102/340 (30%), Gaps = 31/340 (9%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66 + L + T+ D + G ++ I H+ P P++ Sbjct: 17 YTVLALVLAYVGAYATLYRVSDVHTLNQRAAT-VLQGTGYSVSFDADIGRHLFPRPTIVL 75 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-F 125 +++++ + + + + + + + L G++ V + +DQ Y +++G N Sbjct: 76 RNVQLRANQQNAPDLTVAEMKIGIAWQS-LWGDVVVEKLVLDQAQGKLYRTNQGKWNVSA 134 Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 ++ +I V+ ++ + +Q + L D++LQ+ L+ + Sbjct: 135 LMQAKQGDAPLPSFNRILVERSQLGV--HYYNQDWTLQDISLQLMPDGDTHRYHLNANIP 192 Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 A A L+I L P DL E+ Sbjct: 193 ALFWDA-------------------FNVQAAGKLQITPDGLLLP---DLAAQFSGKERGY 230 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 + G + + L + L + N I + N + N Sbjct: 231 DFVGTLH-SAVQVQQEKLLAKQNRIMLDSKHYQTHINTTIEQL---LHQQNGEWESKNGA 286 Query: 306 KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 V + + + D +E +E N N Sbjct: 287 MVLSANPDEWRYQATLKWAQLDWSEQRARSQELNLNLNAS 326 >gi|160896298|ref|YP_001561880.1| hypothetical protein Daci_0849 [Delftia acidovorans SPH-1] gi|160361882|gb|ABX33495.1| conserved hypothetical protein [Delftia acidovorans SPH-1] Length = 1384 Score = 76.8 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 40/379 (10%), Positives = 107/379 (28%), Gaps = 32/379 (8%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDW-----TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LG + + LV + W ++R E A+ +G + + Sbjct: 24 WSLGLVLAFWLVLGSVWGVLHGWIVPRIGEWRPQLESLASRTLGLPVRIGSITARSEGLV 83 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P D+ ++ E + ++ + + L+ + V +YID+P L ++ G Sbjct: 84 PRFELGDVVVEDPEHTADALRLPSVVVAVSARSLMR--LGVEQIYIDRPELVVRRAADGR 141 Query: 122 SNWFQRKSTMDMI-------HNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISARF 173 + + ++ ++GG + +D+ L D++L + + Sbjct: 142 VFVAGIEISPSSGGDNAAADWLFSQTELALRGGSLLWVDEMRQAPPLALRDVDLVLRNKG 201 Query: 174 LNIISPLSIDSIKG-------------SVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 + L +G +++ GN+ ++ Sbjct: 202 WSHGMRLDATPPEGWGERFMLAGLFREPLLSTHEGNWQRWSGQAHAMFTQIDLSRLGQYM 261 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYS-GVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 L + + QP+ + +V + + L+G + Sbjct: 262 DTSDLRLQQGRGALRAWIDLRQGQPVGAMADVAVNALQLQWRENLEPLQLQALTGRLSVQ 321 Query: 280 DGN-VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH--DLNETDFFEE 336 + R + L+ + + + G + D + + Sbjct: 322 HQDGWRFAAQNLEFSTGDGLHWPAGNLRARYNPAGASTQGALGEQGEFQADGIDLAILAQ 381 Query: 337 EEKKNKNDDLKKDDIQYSV 355 ++ + + + Sbjct: 382 LGQRLPLPEQLQRHLADMA 400 >gi|119483471|ref|ZP_01618885.1| hypothetical protein L8106_05441 [Lyngbya sp. PCC 8106] gi|119458238|gb|EAW39360.1| hypothetical protein L8106_05441 [Lyngbya sp. PCC 8106] Length = 2096 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 104/338 (30%), Gaps = 18/338 (5%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RRVLI G V + A T ++ I+ + + V + + Sbjct: 19 RRVLIWGGVGLGVTTIAAGTTAIWFIQNQLAPMVGGIVEGIIERPVTVGPVERFTLS--- 75 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 S+ F + + E + + + + D+ + + ++G Sbjct: 76 SLRFGRSVMPATPTSDSNATTEAVEVAFSLSSIFTNPTLNLDLTLVNADVYLEEDAEGDW 135 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + D +V + ++ + + + + LN+ + ++ + Sbjct: 136 IQTELNLEGDPPIDVKFGSVGLRNANVTLTPYVATGSPVVIPLNISRAVVDVSENNERIK 195 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP------IIIDLFG 236 + GS GT + + I + + P ++D Sbjct: 196 GRLNGSFARGGTFYVQANVFTPETNIEGRLRANNIPVSQFTGLIKAPNFALQRGMVDANI 255 Query: 237 NLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 + + + +G S+ ++ +L+ + ++ F+ + RI +L + L Sbjct: 256 FVKLEDSKLSQVAGKASLDDIQIEVTDLDRPVQP--INAQFRFAGNQARIE--RLTTGLG 311 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 + + + + L+ S+ + ++ T Sbjct: 312 DINVNLSGTATAN----PQLDLSKTQLDFTANIEPTQI 345 >gi|220935438|ref|YP_002514337.1| membrane protein-like protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996748|gb|ACL73350.1| membrane protein-like protein [Thioalkalivibrio sp. HL-EbGR7] Length = 1304 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 24/192 (12%), Positives = 68/192 (35%), Gaps = 17/192 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKG-GIKIHI 58 L+ I + ++L T + +++RE + ++G ++ + + + Sbjct: 32 LKTAAIWITASVLILLAVLVTSLRLVLPMASEYREQMAAELGGLLGHRVEIGALDARWRL 91 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA-EFLPLLSGEIRVFDMYIDQPHLNFYLS 117 L P + D+ I ++D + + + + L L ++RV + + ++ + Sbjct: 92 L-GPRILLDDVAIYGEDDTTPALHVAQVDVGVRAILSLWHRQLRVHSVRVLGADVHIHRD 150 Query: 118 SKGVSNWFQRKSTMDM------------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 ++G + + + ++ R++ D+ Y DL Sbjct: 151 AEGGVQISGAGFAPAAGEAAPAAPGTRVLDLLAGTRFQLQSSRLRFSDEILTLDYRFDDL 210 Query: 166 NLQISARFLNII 177 NL ++ + Sbjct: 211 NLDVAVDADRLR 222 >gi|326801836|ref|YP_004319655.1| hypothetical protein Sph21_4468 [Sphingobacterium sp. 21] gi|326552600|gb|ADZ80985.1| hypothetical protein Sph21_4468 [Sphingobacterium sp. 21] Length = 1036 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 46/400 (11%), Positives = 105/400 (26%), Gaps = 29/400 (7%) Query: 1 MLRRVLIGLGFLFSVVLVGA-FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI- 58 +L+++LIGLG +++L+ F + + ++ +++ Sbjct: 55 ILKKILIGLGLACTLILLAITFITNFLFKPEKITPIALKAINQQLDGQV-FCKSVELTFF 113 Query: 59 --LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFY 115 P D I ++ LL EI + + + +P L+ Sbjct: 114 SSFPRFGARLHDGYILSRDRRDTLVIFSDFRGAVNMTKLLLKKEIDIERITLRRPRLHLV 173 Query: 116 LSSKGVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 + G +N+ I + ++ + ++ D+ S + L Sbjct: 174 VDQHGNANYDILKKETAEATDTSDVQSAIKKIHIKSLRIEDASFHYEDKGSRLDCRIPHL 233 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 L+I + L + S + G ++ + + K+ L Sbjct: 234 ALKIGFVYDEDHLLLKLHSDSKQLTVTKGGFVFIRQLNSLLDTDMKLDKKSRKLSFTNGT 293 Query: 226 LAYP-IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 L I L G + + L NL K L + G Sbjct: 294 LKLNDIDFLLDGVFERPNGRKAVNVALQAKMKVPSLANLWKMVPKRYLKTT-DVDVGGRV 352 Query: 285 ISRYKLQSILPNSST--------DEDNKTKVSQDEENLLNFSENGAESMHDLNE--TDFF 334 + + + + + + D NE Sbjct: 353 FLVLRTNGVYGEGKLPVSRAQLKIHGGSLRYKKFPGQITALEADVESL-LDFNERQRSAV 411 Query: 335 EEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374 + + + + N + + D E + + Sbjct: 412 RINKMLIRGTGIHLSGSVLAQNLLDNPEIEPDVEANIDLT 451 >gi|254514689|ref|ZP_05126750.1| hypothetical protein NOR53_2103 [gamma proteobacterium NOR5-3] gi|219676932|gb|EED33297.1| hypothetical protein NOR53_2103 [gamma proteobacterium NOR5-3] Length = 1140 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 35/292 (11%), Positives = 91/292 (31%), Gaps = 34/292 (11%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAE 91 E Q + I+G++++ +I I + ++ + + ++ ++ + Sbjct: 36 PYLEAQVSRILGRRLSFHDAPQIQIKSGLHLSVSNVSLANADWAGQDDMLELRSITAHVD 95 Query: 92 FLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILEKIH 143 L ++ + + ID L + G+SN + + V++ I Sbjct: 96 LSTLFDTQVVLETLLIDGLQLRLRENVDGLSNLPQIAGDDTEDTTTEPEHPLPVLIRHIQ 155 Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203 + RI + + Q L L A K +++ +G G+ +K Sbjct: 156 MSNVRIDRQNDATQQSMSLLIDTLSQEAPN------------KNNLVYQGHGSLQDKPWD 203 Query: 204 FKITANFPAKN-KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262 I + + + + + ++ L + S ++ G ++ Sbjct: 204 LSIDGSGFSSLRSGLDMSATFSGSLGNLKLEGDYRLPNIRELQNLSFNATLQGPVPDRIS 263 Query: 263 LELSAKKSRLSGNFKIS----------DGNVRISRYKLQ-SILPNSSTDEDN 303 + + + D V++ + LQ S ++ D Sbjct: 264 ALSPILEPNEAAQVVLHISDIDPGLQVDLRVQLPQITLQLSGNIDNPRKSDG 315 >gi|99080933|ref|YP_613087.1| hypothetical protein TM1040_1092 [Ruegeria sp. TM1040] gi|99037213|gb|ABF63825.1| hypothetical protein TM1040_1092 [Ruegeria sp. TM1040] Length = 1155 Score = 76.5 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 47/366 (12%), Positives = 106/366 (28%), Gaps = 34/366 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFID-WTDFREDFERQATLIVGKKIAVK-GGIK--IHI 58 + + L L + + + +D R + ER+ +G + ++ G I+ + Sbjct: 53 KSTVWTLALLAGLTVAAWVLLDKRLDAPEWLRSEAERRIERHLGG-LQIEFGEIELVVRR 111 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 P + +D+ + + +E PLL G++R + + S Sbjct: 112 GWRPRLSLRDVTLFYPDGS-PAVHLEDAQAALAMRPLLRGQLRPKLISLSGLFATLETGS 170 Query: 119 KG-------------VSNWFQRKSTMDMIHNVIL------EKIHVKGGRIKIIDQESDQV 159 G + + L ++ + + ID+ D+ Sbjct: 171 DGAVALSFSDGAAPLRQARNLPQLIEAWDRQLELPILSAVTQVETQAVTLNYIDRRIDRA 230 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKG-----SVIAEGTGNFDNKRSAFKITANF-PAK 213 + L + +S + + + G +V A + + + F + + P+ Sbjct: 231 WTLDGGAVLLSRKGDRVSIDAGFSVLSGREYASTVEANYQSDIGDTAAEFAVVVDQVPSS 290 Query: 214 NKAISLKI--QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR 271 + A L L PI L G + + V + + Sbjct: 291 DIASQSPAFGWLDVLRAPISGALRGAVDSEGALRPLNASLQVGRGVIQPNDQLKPIPLQS 350 Query: 272 LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGAESMHDLNE 330 F ++ +L S + + + V + L + S LN Sbjct: 351 AESYFTFDPARQELAFSRLSVESGWISGQMEGRAELVGVRDGRLTQLVGQLSFSDLKLNP 410 Query: 331 TDFFEE 336 + E Sbjct: 411 LRLYPE 416 >gi|117620046|ref|YP_854811.1| AsmA family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561453|gb|ABK38401.1| AsmA family [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 688 Score = 76.5 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 104/337 (30%), Gaps = 29/337 (8%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEG 85 D + + G + + G + + L ++ + + ++ Sbjct: 25 LFDAERAKGPIASWLSQQTGVPVTI-GRLVFNPLHPYTLLAEQVSYGNA------VTLDK 77 Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVK 145 + + E + LS ++R+ + + +P + L ++ I + ++++ ++ Sbjct: 78 IYLEIESIDWLSRDVRIAHLDLIRPAIKLPLPNQ----LPSLPVHSLTIADSTIDRLSLE 133 Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK 205 + + LSD L R L+I+ + A N + Sbjct: 134 SDGLTLR----GLNATLSDWQLLNPVRPPQANLTLNINELATPAWALSRLNLAGRLEGQV 189 Query: 206 ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 ++ + N L L +P L N + I G + A + ++L+L Sbjct: 190 LSTDKLTANLFDGLLETGMVLDWPAR-SLRLNNLKTQGMRIEWGTLAKAESPLRQVSLDL 248 Query: 266 S----AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321 + + +++ N +++ + Q+ + + F Sbjct: 249 GQIRDLSFNDIERELALNNLNGQLTAFNWQAGS-----TPSGYFSGTLGDLGRGLFQLEA 303 Query: 322 AESMHDLNETDFFEEEEKKN----KNDDLKKDDIQYS 354 + + E + K N +L D +Q Sbjct: 304 IQGKVAFSTQQLDAELQGKAYEGEFNLELSLDPLQQK 340 >gi|121605795|ref|YP_983124.1| hypothetical protein Pnap_2904 [Polaromonas naphthalenivorans CJ2] gi|120594764|gb|ABM38203.1| protein of unknown function DUF748 [Polaromonas naphthalenivorans CJ2] Length = 1298 Score = 76.5 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 52/393 (13%), Positives = 109/393 (27%), Gaps = 39/393 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RRVL +G + + VP + E+ T +G++++V G + Sbjct: 28 RRVLWAVGAWLLLWALAYAAVPFI-----LKSQLEKIGTEKLGRRVSV-GAVDFKPW-TL 80 Query: 63 SVFFKDIRID---------QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113 + D+ I + + KI L + AE LL + +++P + Sbjct: 81 ELTINDLAIAKAQPAALQPPAAPAAPQLKIRRLYIDAELASLLRLAPVADALVVEEPVAS 140 Query: 114 FYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 +G + L + + GG+I +DQ + + L DL Sbjct: 141 LTYLGQGRYDIDDILARLKKPDAQPAGEAPQFSLYNLVLSGGQIDFVDQSVHKTHALRDL 200 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 L + + + R A A N L Sbjct: 201 RLAVP------FLSNLASQREIKTAPHLAFTLNGSRFDTAAVATPFASNHKTDAAFALRG 254 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 DL L + + +V K+ + +A R+SG+ + Sbjct: 255 ------FDLQPYLAYWPASLPFRLQSAVLHADVKVAFEQTAAPVVRISGSVTADKVRLLQ 308 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 + + + ++ ++ D+ L + + + Sbjct: 309 ASGPDAAPGAGAELLAFDRLHLTLDDVRPLEQMVKLSAVELTAPTLSITRDRAGRLNLLP 368 Query: 346 LKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378 + D Q + + Q + + Sbjct: 369 V---DAQSATKNIAISAGAASANGQNDIKNQAV 398 Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 87/302 (28%), Gaps = 45/302 (14%) Query: 63 SVFFKDIRI-------DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 SV +R+ G+ + L + + + L +++ + + P L+ Sbjct: 298 SVTADKVRLLQASGPDAAPGAGAELLAFDRLHLTLDDVRPLEQMVKLSAVELTAPTLSIT 357 Query: 116 LSSKGVSNWFQRKSTMDM---------------------------IHNVILEKIHVKGGR 148 G N + V++ +++V+GG Sbjct: 358 RDRAGRLNLLPVDAQSATKNIAISAGAASANGQNDIKNQAVASAIPWTVLVTRVNVRGGS 417 Query: 149 IKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208 + D+ + +L ++A + S + G+ SA + Sbjct: 418 VNWRDETLPSPAQIRLKDLVLNASAIAYPF-------AASAPLQFNGSLGLDPSALNVPT 470 Query: 209 NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLLNLELSA 267 A K+ + P ++ G+ + ++ + L A Sbjct: 471 QGKAVAKSPAPAPAPVTAPAPALVTFKGSATDRAADITADVAAWPLSMAAKYVGQFLLPA 530 Query: 268 KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFS-ENGAESMH 326 RL + + Q++ + + +++Q +L++ A+ Sbjct: 531 LNGRLDAQLGVKWQAALADQP--QALRITAPAIAVSDVQLAQGATSLVSIQRAELAQVEI 588 Query: 327 DL 328 DL Sbjct: 589 DL 590 >gi|120613287|ref|YP_972965.1| hypothetical protein Aave_4656 [Acidovorax citrulli AAC00-1] gi|120591751|gb|ABM35191.1| conserved hypothetical protein [Acidovorax citrulli AAC00-1] Length = 1425 Score = 76.5 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 47/367 (12%), Positives = 99/367 (26%), Gaps = 34/367 (9%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDW-----TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LG L + L+ A + W ++R E QAT +G + + Sbjct: 21 WSLGLLIAFWLLVAVAWGVLHGWIVPRIGEWRPALEAQATKALGVPVRIGALSARSEGLV 80 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V D+ + + ++ + L + +YI++P L+ + G Sbjct: 81 PAVELTDVALLDPQG-REALRLPRVVAALSPRSALR--LGFEQLYIERPELDVRREADGQ 137 Query: 122 ---------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISA 171 ++ ++GG ++ D LSD+++ + Sbjct: 138 LVVGGIRLHGGAGSGDDGAAADWVFSQGEVALRGGTVRWTDAMRGAPPLELSDVDIVLRN 197 Query: 172 RFLNIISPLSIDSIKGS-VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 R L G F A + ++ Sbjct: 198 RGWRHAMRLDATPPASWGDRFTLMGRFRQPLLTTHGGAWRQWSGLLFAQFGRVDVSRLRQ 257 Query: 231 IIDLFG-NLFWNEKQPIYS-----GVFSVAGDFSKLLNLELSAKKS-------RLSGNF- 276 +D+ G ++ G + L ++E + K ++G Sbjct: 258 HVDIEGIDVARGRGALRAWLDVRRGEVAGGTADVALADVEATLGKGLEPLALASVAGRVG 317 Query: 277 -KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335 + +G S LQ + + V Q + E D + Sbjct: 318 GRWLEGGFEASTEGLQFLTRDGLRWPGGNVSVRQAGRDPRAPEREQGELRADRLDLAALA 377 Query: 336 EEEKKNK 342 + + Sbjct: 378 QIASRLP 384 >gi|307609691|emb|CBW99200.1| hypothetical protein LPW_09821 [Legionella pneumophila 130b] Length = 513 Score = 76.5 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 54/405 (13%), Positives = 115/405 (28%), Gaps = 37/405 (9%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +L ++L+ L V + + + I ++ + T I K+ + G I + P Sbjct: 3 LLGKILLVFTALMIFVSITLWILATNIKPETIKQLVSNKITAITHKQSQIDGTISWQLFP 62 Query: 61 FPSVFFKDIRIDQKE-DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + F I I + + ++ I+ L + + PLL G ++ ID L + Sbjct: 63 RPGLKFNKIHIGNENLNDNYSLLIDTLLLNLKITPLLKGHFVFSEINIDGLKLFINQENN 122 Query: 120 GVS-----NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE-----SDQVYFLSDLNLQI 169 N Q +T ++K+ + G+I + ++ + NL+ Sbjct: 123 EKPLSSEKNANQYNTTTYPNEQFAIQKLLLSHGQIILNNKGHSTVLKNIQIGAEQFNLKN 182 Query: 170 SARFLNIISPLSIDS--IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 S + I + L+ + G S N +I ++Q+ + Sbjct: 183 SPFSVQIKAKLTDAAFLQTAKANINFKGRVSLSPSIID-ELNSGISKSSIEGQLQIQNIL 241 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF-------KISD 280 N + F+ + + Sbjct: 242 LNQFAIKKINATLKTHKR--DIQFNPLTLSLYNGESIGDMDYVIATQQLLINQTATNLDG 299 Query: 281 GNVRISRYKLQSILPNSSTDEDN--------------KTKVSQDEENLLNFSENGAESMH 326 + S K +I N K ++ + + N + + + Sbjct: 300 KQLITSLLKHPAISGNLDYSIHASIPLKALSIESLVSKGTITLKDGEVYNINLDQLLNNL 359 Query: 327 DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371 + E K D Q + K + + Q Sbjct: 360 KVKLNSLMTETPDNIKKLTQSADWDQNKNMQGNTKFKLANFKFQL 404 >gi|118594723|ref|ZP_01552070.1| probable transmembrane protein [Methylophilales bacterium HTCC2181] gi|118440501|gb|EAV47128.1| probable transmembrane protein [Methylophilales bacterium HTCC2181] Length = 1316 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 34/380 (8%), Positives = 97/380 (25%), Gaps = 29/380 (7%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILP 60 + V L + S +++ A ++ + +E + + + + + Sbjct: 11 KVVFSSLFIVISAIIITALAFVFYLPSHLNEIKEKIVVSLSEKISYTVQID-DLSAEWNG 69 Query: 61 -FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 PS+ +I + K+ + + + +L L + + + +P + Sbjct: 70 INPSLILSNIAVFNKD-QVKSISTKKIIVDFSWLSLFKLRPVIDQITLLEPDVLLVKEPD 128 Query: 120 GVSNW------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQISA 171 G + + + L+ + + G + ID+ + + +++N + Sbjct: 129 GTFSINGITTNQKSVDDDLANWALNLDDLIISNGTLSWIDKTINASDVILFNNVNFHYGS 188 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 + S+ F N + L Sbjct: 189 SKALAFLGRRAFELTSSMP-----KFSKNPIRLSGFFNLLNYSDRDDLDGAASIYLQKFS 243 Query: 232 IDL-----FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 + L + + + L R + +S + Sbjct: 244 LKLIQPWQKTISQIKQGEVSADLSIEFDAGNINDVGGLLKIDALRAT---TLSKQPINFD 300 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346 + + K + F N A +++ + + +L Sbjct: 301 ILQGAIDFKRNENILSFKLS-DLSLKQNAEFKVNKASLRLVMSDQMEVQSVSLNSARINL 359 Query: 347 KKDDIQYSVNKKEEKDNSHD 366 + DI + E + Sbjct: 360 E--DISKAAEYLPEPFSEAK 377 >gi|30249307|ref|NP_841377.1| transmembrane protein [Nitrosomonas europaea ATCC 19718] gi|30180626|emb|CAD85239.1| possible transmembrane protein [Nitrosomonas europaea ATCC 19718] Length = 1290 Score = 76.1 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 33/266 (12%), Positives = 87/266 (32%), Gaps = 18/266 (6%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIE 84 D +R D T + G+ + + I+ + P + + + + ++D Sbjct: 39 LPDIGKYRSDIAAAMTRVAGQPVRID-SIRANWDGLRPHLSMQGVSVSDRQD-EPVLVFP 96 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------QRKSTMDMIHNVI 138 + + LL GE+ ++ ID+P L KGV + ++ + + + Sbjct: 97 EIEGTVSWRSLLRGELNFHEIIIDRPALVTRRDVKGVLHIAGVTLGENQQESGFLDWLLR 156 Query: 139 LEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNIISPLSIDSIK-----GSVIAE 192 ++ ++ I D+ V++ +NL + + + + V Sbjct: 157 QRRLIIRQAVIYWQDELRRRPVHYFESVNLHLQNKRGGRRHQFGLQAHSSDPLFSRVDLR 216 Query: 193 GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL---FGNLFWNEKQPIYSG 249 G D+ ++ + + + L + P + L G++ Sbjct: 217 GDVTGDSVQTLSAWQGRLFIQLQDVDLGSWQEWMTLPADLVLKKGKGSMRAWADIRAGIL 276 Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGN 275 V+ + + ++ + L + Sbjct: 277 ARWVSDISLRSTAVHVARQLPVLEID 302 >gi|124265436|ref|YP_001019440.1| putative transmembrane protein [Methylibium petroleiphilum PM1] gi|124258211|gb|ABM93205.1| putative transmembrane protein [Methylibium petroleiphilum PM1] Length = 1472 Score = 76.1 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 41/383 (10%), Positives = 100/383 (26%), Gaps = 42/383 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI---- 56 R L G+ + S+V+ + I +R D E + + +G + + G I++ Sbjct: 61 RWGLAGVLLVSSIVIAAWLVLQWAILPRIEHWRPDMEMRVSHALGVPVRI-GAIEVTDGG 119 Query: 57 HILPFPS-VFFKDIRIDQKEDGS----FESKIEGLSMRAEFLPLL-----SGEIRVFDMY 106 + + + +D+ + + ++ + LL +R + Sbjct: 120 SVWRWARSIELRDVVLYEAPQQDIEPREALRLPSVRAVLSPSSLLPGWDGRWRLRFDQLR 179 Query: 107 IDQPHLNFYLSSKGVSNWF------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QV 159 ++ L ++G ++ ++GG + D+ Sbjct: 180 VEGARLEVRRDARGRILVAGLESSGPGDEGAATDWFFSQQEFVIQGGTLVWTDELRGAPP 239 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGS---VIAEGTGNFDNKRSAFKITANFPAKNKA 216 L ++L + L G + A+ Sbjct: 240 LSLDAVDLVVRNGVRRHELRLDATPPAEWGERFSLRGHFTQPLLARPVEGQGGLLARPGD 299 Query: 217 IS-----LKIQL-FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270 L L P+ + + V ++L+ + Sbjct: 300 WRRWVGTLYADLPSADIAPLRRQVDLPFDLSRGAGALRAWVEVKNAEPVAATVDLALRDV 359 Query: 271 RLSGNFKISDGNVRISRYKLQSI----LPNSSTDEDNKTKVS---QDEENLLNFSENGAE 323 L + R + L ++ + + + L++ A Sbjct: 360 VL--RLAADAEPLAFERIDGRLSGRPPLGDAGGARSGELQARQFGFVTADGLHWPAADAT 417 Query: 324 SMHDLNETDFFEEEEKKNKNDDL 346 L+E E + + DL Sbjct: 418 LRWRLDEAGALAGGELRAQRLDL 440 >gi|220918734|ref|YP_002494038.1| protein of unknown function DUF748 [Anaeromyxobacter dehalogenans 2CP-1] gi|219956588|gb|ACL66972.1| protein of unknown function DUF748 [Anaeromyxobacter dehalogenans 2CP-1] Length = 955 Score = 76.1 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 32/280 (11%), Positives = 79/280 (28%), Gaps = 29/280 (10%) Query: 16 VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQK 74 +L + + R +QA+ + + + + ++ I P SV + +R+ Sbjct: 24 LLCAYTALGFLAAPSLVRRVAVKQASAALHRPVEID---RVRINPLALSVTVEGLRVKHG 80 Query: 75 EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR------- 127 + + + L +R L LL+G++ ++ + +P L+ L ++G + Sbjct: 81 DGA-PFAAWDSLYVRLAPLRLLAGDVGFAEIRLVRPALHVGLDARGALTFEDLLAGDPAA 139 Query: 128 -------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + + ++ V+ R+ D + + L + Sbjct: 140 AKAGAPAAPAKQGGLGLSIRRLAVEEARVVFRDATRKPAFETTLGPLTVRLDSFRTRGGG 199 Query: 181 S-------IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL---KIQLFPLAYPI 230 + GT RS+ + K + + + Sbjct: 200 DSPYSFTGTTESGETFRWTGTVRSAPLRSSGTLAFERIQLPKYAPYIHDQAPVDLAEGVL 259 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270 ++ L W + L A Sbjct: 260 DLETAYELAWGADARVLRTSGGKLTVERLALAPRGQADAP 299 >gi|224025145|ref|ZP_03643511.1| hypothetical protein BACCOPRO_01879 [Bacteroides coprophilus DSM 18228] gi|224018381|gb|EEF76379.1| hypothetical protein BACCOPRO_01879 [Bacteroides coprophilus DSM 18228] Length = 825 Score = 76.1 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 104/344 (30%), Gaps = 39/344 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------I 56 ++ L G V+L+ +P F+ + K + + + + Sbjct: 6 KKTLKIAGITLGVILLLLLILPF-----AFQGKLAKLVKEEGNKMLNAQFDFRTLNISLL 60 Query: 57 HILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLN 113 P SV +D + + L+ G + + + ++ Sbjct: 61 RNFPSASVSLEDFWLKGTGPFENDTLIQAGELTAAVNLFSFFGDGGYDISRIIVKDTRVH 120 Query: 114 FYLSSKGVSNWFQRKSTMD----------MIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 + G NW K + D + L+K+ V + D++ LS Sbjct: 121 AIVLEDGRPNWDVMKPSPDAETPEDETAQETFRIKLQKLSVDNLSVVYDDRQGGVFADLS 180 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 L S F + + + + S+ G + + + + A ++ Sbjct: 181 RLEADCSGDFGSDRTVVDLKMETPSLTCRTGGIPLLNKVSLEADMDVDADLAGGKFTLRE 240 Query: 224 FPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L I ++L G L ++ + K L + A ++ + K +DG Sbjct: 241 NMLRLNAIQLNLDGWLAQTKQGMDMDLRLNTNEVGFKELLSLIPAIYAKDFQDLK-TDGK 299 Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 V ++ + + + TKV + + ++M Sbjct: 300 VTLNAF--------ARGSMEGNTKV-----PQFEVNLDVKDAMF 330 >gi|54293875|ref|YP_126290.1| hypothetical protein lpl0931 [Legionella pneumophila str. Lens] gi|53753707|emb|CAH15165.1| hypothetical protein lpl0931 [Legionella pneumophila str. Lens] Length = 513 Score = 76.1 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 57/402 (14%), Positives = 130/402 (32%), Gaps = 31/402 (7%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +L ++L+ L V + + + I ++ + T I K+ + G I + P Sbjct: 3 LLGKILLAFTALMIFVSITLWILATNIKPETIKQLVSNKITAITHKQSQIDGTISWQLFP 62 Query: 61 FPSVFFKDIRIDQKE-DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + F I I + + ++ I+ L + + PLL G ++ ID L + Sbjct: 63 RPGLKFNKIHIGNENLNDNYSLLIDTLLLNLKITPLLKGHFVFSEINIDGLKLFINQENN 122 Query: 120 GVS-----NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF-----LSDLNLQI 169 N Q +T ++K+ + G+I + ++ V NL+ Sbjct: 123 EKPLSSEKNANQYNTTTYPNEQFAIQKLLLSHGQIILNNKGRSTVLKNIQIGAEQFNLKN 182 Query: 170 SARFLNIISPLSIDS--IKGSVIAEGTGNFDNKRSAFK-ITANFPAKNKAISLKIQLFPL 226 S + I + L+ + G S + + + L+IQ L Sbjct: 183 SPFSVQIKAKLTDAAFLQTAKANINFKGRVSLSPSIIDELNSGISKSSIEGQLQIQNILL 242 Query: 227 AYPIIIDLFGNLFWNEKQPIYS-GVFSV-AGDFSKLLNLELSAKKSRLSGNFK-ISDGNV 283 I + + +++ ++ S+ G+ ++ ++ ++ ++ + + Sbjct: 243 NQFAIKKINATVKTHKRDIQFNPLTLSLYNGESIGDMDYVIATQQLLINQTATNLDGKQL 302 Query: 284 RISRYKLQSILPNSSTDEDN--------------KTKVSQDEENLLNFSENGAESMHDLN 329 S K +I N K ++ + + N + + + + Sbjct: 303 ITSLLKHPAISGNLDYSIHASIPLKALSIESLVSKGTITLKDGEVYNINLDQLLNNLKVK 362 Query: 330 ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371 E K D Q + K + + Q Sbjct: 363 LNSLMTETPDNIKKLTQSADWDQNKNMQGNTKFKLANFKFQL 404 >gi|222112531|ref|YP_002554795.1| hypothetical protein Dtpsy_3368 [Acidovorax ebreus TPSY] gi|221731975|gb|ACM34795.1| conserved hypothetical protein [Acidovorax ebreus TPSY] Length = 1378 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 66/207 (31%), Gaps = 16/207 (7%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILP 60 R L+ L + ++ + +I DFR E+QA +G + + Sbjct: 20 RWGLVALVTFWLLLAAAWGGLHGWIVPRIGDFRPQLEQQAQRALGVPVRIHSISARSEGL 79 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 PSV KD+ + + ++ + + LL +YI+ P L+ G Sbjct: 80 IPSVELKDVALLDAQG-REALRLPRVVVALSPRSLLRFG--FEQIYIEGPELDMRRERDG 136 Query: 121 VSNWF-------QRKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLNLQISAR 172 + ++ ++GG ++ D++ S + L++++L + Sbjct: 137 RIVIAGLAFRDSAEGDSAAADWLFSQAEVAIRGGTLRWTDEQRSAEPLALTEVSLVLRNS 196 Query: 173 FLNIISPLSIDSIK---GSVIAEGTGN 196 L G Sbjct: 197 ARRHQVRLDATPPAEWGAPFTLRGQFR 223 >gi|16330183|ref|NP_440911.1| hypothetical protein sll1265 [Synechocystis sp. PCC 6803] gi|1652671|dbj|BAA17591.1| sll1265 [Synechocystis sp. PCC 6803] Length = 1978 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 43/333 (12%), Positives = 100/333 (30%), Gaps = 20/333 (6%) Query: 6 LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65 LI LG L V + + E + + ++G+ + + + V Sbjct: 26 LITLGGLTVVGTGLYLGGQHL-AYREASPFLESELSRLLGRPVDIGPVEDFRL---LGVR 81 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 + + D + IE + + LP L G+ I P +N G Sbjct: 82 LGASSLPRTVDDATAIAIEAIEIDVNPLPFLVGQPVEVRATIINPQVNLEQKPTGQWTTI 141 Query: 126 QRKSTMDMIH-NVILE-KIHVKGGRIKIIDQESDQVYFLSDL-----NLQISARFLNIIS 178 + + L ++V+ +++++ Q Q ++ + + Sbjct: 142 KLPEGDKPFSLPLDLTVGVNVQNAQLQLLPQGLQQPVQITAAGQGGYQYRRQGDRQTVSY 201 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL--KIQLFPLAYPIIIDLFG 236 L + S+ + A+G + S +T N SL + + I + G Sbjct: 202 DLGVQSLGSDLQAQGQTVLNTGESQTNVTINRLDLPALASLLPPLPVALETGEISGQVRG 261 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS--GNFKISDGNVRISRYKLQSIL 294 +L ++ ++ K L + K+ L + + ++I++ + Sbjct: 262 SLPSWQQWSALQ---TLGNVELKQLQARIDKVKAPLQVGLDLGFTGQKLQINQGLINLGP 318 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 N+ + + D Sbjct: 319 LNA--ALQGTIDWRSGYDLQFTTKAIDTAAFLD 349 >gi|299136240|ref|ZP_07029424.1| AsmA family protein [Acidobacterium sp. MP5ACTX8] gi|298602364|gb|EFI58518.1| AsmA family protein [Acidobacterium sp. MP5ACTX8] Length = 557 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 64/215 (29%), Gaps = 23/215 (10%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE--DGSFESKIEG 85 + R + +G+ + + + +H+LP P ++ + + + Sbjct: 43 NVNRLRHRIATSMSESLGRPVHLD-SVTLHLLPMPGFTLNNLVVSEDPAFGSEPVIRANQ 101 Query: 86 LSMRAEFLPLLSGEIRVFDMYI-----DQPHLNFYLSSKGVSNWF-----------QRKS 129 + R F L ++ + + P LN +++G N + Sbjct: 102 VEARLRFSSLWRRQVEFSTIRFIESDGNHPSLNIVRNAQGRWNLEDILMQAAHANTAPTA 161 Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189 I R+ I E + L+D + + +L+ S+ Sbjct: 162 QRKAGSVPRFPYIEATSARVNIKLGEEKMPFSLTDTDFAL---WLSSPQQWSVRLQGTPA 218 Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 + + + + T A+ + LK+ Sbjct: 219 RTDTNASDTGE-MRLEGTLERAARFADVPLKLTAS 252 >gi|319796498|ref|YP_004158138.1| hypothetical protein Varpa_5875 [Variovorax paradoxus EPS] gi|315598961|gb|ADU40027.1| hypothetical protein Varpa_5875 [Variovorax paradoxus EPS] Length = 1393 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 81/290 (27%), Gaps = 28/290 (9%) Query: 31 DFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89 DFR E QA+ +G + + G I FP+ +D+ + D ++ + Sbjct: 50 DFRGALEAQASKAIGVPVRI-GSITARPEGLFPAFELRDVVLQDA-DQREALRLVRVVAS 107 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV-------SNWFQRKSTMDMIHNVILEKI 142 + +YI+ P L+ ++G + T ++ Sbjct: 108 VSPRSIWR--FSFEQLYIEGPQLDVRRDAQGKLHVAGLHMDTDTTGETRAADWFFAQREL 165 Query: 143 HVKGGRIKIIDQE-SDQVYFLSDLNLQISARFLNIISPLSIDSIKGS-VIAEGTGNFDNK 200 ++GG ++ D++ + L+D+ L G G F Sbjct: 166 VIEGGTVRWTDEQRQAEPLLLTDVRFVARNGGRRHGLRLDATPPAGWGQRFTLRGQFRQP 225 Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY-----SGVFSVAG 255 + + + + + + L + G Sbjct: 226 LLSVRTGRWQTWDGQIYADLPYIDVTRLGQYVSLDARIREGNGAVRLWADVQDGQLVGGA 285 Query: 256 DFSKLLNLELSAKKS-------RLSGNFK--ISDGNVRISRYKLQSILPN 296 L ++ S K ++G + D + S LQ + Sbjct: 286 ADLGLDRVDASLGKGLQPLVLRSVTGRLAGHLKDDTLEFSTTALQFDTSD 335 >gi|149927211|ref|ZP_01915468.1| hypothetical protein LMED105_07213 [Limnobacter sp. MED105] gi|149824150|gb|EDM83371.1| hypothetical protein LMED105_07213 [Limnobacter sp. MED105] Length = 1348 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 37/361 (10%), Positives = 103/361 (28%), Gaps = 39/361 (10%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LPF 61 + L +++ + + + + +R + ++ G I + G I+ Sbjct: 26 LFWVLIAVYTPLCMALLAIKWLVLPEIDRYRPEIQQYLQTQTGTAIEI-GQIQASWRGFG 84 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P + +++R+ Q + L + +L+ R+ ++ + P L+ +S+GV Sbjct: 85 PLLEVRNVRLQQANG-EPGFTADQLKLTWSLPSILAFNPRLKNLEVQSPALSVVRNSQGV 143 Query: 122 SNWFQRKSTMDMI-------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 D + +++ +K G + D A Sbjct: 144 IEVAGIPLVDDGSQGNPGLDWLLAQQRVLLKNGVLNWQDAMGQFP--------SAQAIET 195 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 ++ + + + + ++ P + + + L Sbjct: 196 ELLLENGLSRHQAGLTFKLPV-LAQTPVNARLNFKTPLLERQL-----GDVSKWKGSFYL 249 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 ++ VF G L + G + S + RI + + + Sbjct: 250 S---ALVDQTAPLESVFKTFGLDVDLTQPQGKLWIDFEDGFVQRSLLDARIGKLRFSNPE 306 Query: 295 PNS-STDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353 ++ D N + + G ++ + N + + + D+ Sbjct: 307 VDAPPFDMTNTSAL---------VEVQGQHALFEPNAISIRQLKGQIAGQKQFGPTDLSL 357 Query: 354 S 354 Sbjct: 358 K 358 >gi|163751486|ref|ZP_02158709.1| hypothetical protein KT99_14074 [Shewanella benthica KT99] gi|161328607|gb|EDP99757.1| hypothetical protein KT99_14074 [Shewanella benthica KT99] Length = 1017 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 52/411 (12%), Positives = 131/411 (31%), Gaps = 49/411 (11%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFK 67 L L ++ L+ + L + + + ++ + ++ + + ++ + I PF V Sbjct: 22 LAILLTIYLIFTVLLGLLLPYVAHK-QLPQELSAMLKRPVMLE---DVSINPFTLKVSLT 77 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL---------- 116 R+ +K++ + LS +F +++ + V + +D+P+ Sbjct: 78 GFRVQEKDN-TNFIGFTKLSFELDFWRSIINQALSVDHVTLDKPYALLERLNEPDSFTFN 136 Query: 117 ---------SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 + + + T + + ++ ++ + + + D+ ++ ++L Sbjct: 137 FSDIIHELVNREINETLDNQPETPNGLPHIKVKDLSIVNAELVYTDKVTNSRLHYPAMSL 196 Query: 168 QISARFLNIISPLSIDSIK-----------GSVIAEGTGNFD-----NKRSAFKITANFP 211 + A + + G + +G + I Sbjct: 197 HLKAFDTLKKIDSNGNRSNQFSIRFVGENGGEIATQGKLQLSPLNIIGELQLTAIQLPQF 256 Query: 212 AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY--SGVFSVAG-DFSKLLNLELSAK 268 A ++ +L + ++ + G FS+ F N LS Sbjct: 257 WSFIADEVQARLESGQFSFNTHFEILAQADQALQLLTQDGQFSLENISFVDDQNPLLSLP 316 Query: 269 KSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 L G + ++D V+++ + + + N+S + VS + S Sbjct: 317 LLSLHGISLNLADKQVKVASVETEKLSLNASLTTEGLDIVSLFM--PVVTSAEAQSLKSA 374 Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378 ET EK + + K+ D +S +D EN D Sbjct: 375 QQETA-SSIREKTGQESEDKQADSAWSAIITSVTVKDYDLNLVENRLTDNT 424 >gi|326319367|ref|YP_004237039.1| hypothetical protein Acav_4592 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323376203|gb|ADX48472.1| Conserved hypothetical protein CHP02099 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 1398 Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/367 (11%), Positives = 96/367 (26%), Gaps = 34/367 (9%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDW-----TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LG L + L+ A + W ++R E QAT +G + + Sbjct: 7 WSLGLLIAFWLLVAVAWGVLHGWIVPRIGEWRPALEAQATKALGVPVRIGALSARSEGLV 66 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P++ D+ + + ++ + L + +YI++P L+ + G Sbjct: 67 PAIELTDVALLDPQG-REALRLPRVVAALSPRSALR--LGFEQLYIERPELDVRREADGQ 123 Query: 122 ---------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISA 171 ++ ++GG ++ D LSD+++ + Sbjct: 124 LVVGGIRLHGGAGSGDGGSAADWVFSQGEVALRGGTVRWTDAMRGAPPLELSDVDIVLRN 183 Query: 172 RFLNIISPLSIDSIKGS-VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 R L G F A + + ++ Sbjct: 184 RGWRHAMRLDATPPPAWGDRFTLMGRFRQPLLTTHGGAWRQWSGQLFAQFGRVDVSRLRQ 243 Query: 231 IIDLFG-NLFWNEKQPIYSGVFS------------VAGDFSKLLNLELSAKKSRLSGNF- 276 D+ G ++ +A + L + ++G Sbjct: 244 HADIEGIDVAQGRGALRAWLDVRRGEVAGGTADVALADVEATLGQGLEPLALASVAGRVG 303 Query: 277 -KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335 + +G S LQ + + + Q + E D + Sbjct: 304 GRWLEGGFEASTEGLQFLTRDGLRWPGGNVSIRQAGRDPRAPEREQGELRADRLDLAALA 363 Query: 336 EEEKKNK 342 + + Sbjct: 364 QVASRLP 370 >gi|90407761|ref|ZP_01215939.1| hypothetical membrane protein [Psychromonas sp. CNPT3] gi|90311121|gb|EAS39228.1| hypothetical membrane protein [Psychromonas sp. CNPT3] Length = 1076 Score = 75.3 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 46/373 (12%), Positives = 102/373 (27%), Gaps = 24/373 (6%) Query: 3 RRVLIGLGF-LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60 +R + + LF + F+ D++E K +V+ I + Sbjct: 10 KRFSVLIAVKLFIFAALLTTARIFFVSVGDYKEQVASWLVEEYSVKFSVE-DISASVDFS 68 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 V +++ + F K++ L + F + + + + L + Sbjct: 69 GLVVTLNQLQLPNSKGLPFTLKLDHLFLHLNFWDSIFERRLNFNRISLQGADLTLKSNIS 128 Query: 120 GVSNWFQRKSTMDMIHNV---ILEKIHVKGGRIKIIDQES-DQVYFLSDLNLQISARFLN 175 + T+ + N+ L++ + R+ D + F+ +L S + Sbjct: 129 DTDPADKPSLTVRTLENIFLNQLKRFSISNSRLHFYDHFGVKKTVFIEELRWVNSGKLHQ 188 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNK----RSAFKITANFPAKNKAISLKIQLFPLAYPII 231 + + N + + A N I+ + + Sbjct: 189 GVGRAKTSDAPNEDALQFVLNLSGEVENTEKDLQGELYVAANNLNINNYLSGKIDPSATL 248 Query: 232 IDLFGNLFWNE---KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN--VRIS 286 +D + + S + + SG ++++ R Sbjct: 249 LDARIGFQAWLSFSDKRLESLQVRLRPSQLSWQQFSQTQDWQLNSGYLQLTNSRQGWRFD 308 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEEN-LLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 Y +Q N+ D+ S +N + G F+ K Sbjct: 309 SYDVQIKQNNN---ADSTLSFSGTGDNSNVAMQVKGVTL---AKALPFYLLFNPPAKEQA 362 Query: 346 LKKDDIQYSVNKK 358 LK DI N Sbjct: 363 LKLKDIALDANLD 375 >gi|168699320|ref|ZP_02731597.1| hypothetical protein GobsU_07362 [Gemmata obscuriglobus UQM 2246] Length = 1126 Score = 75.3 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 42/354 (11%), Positives = 96/354 (27%), Gaps = 20/354 (5%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVG-KKIAVKGGIKIHILPFPSVF 65 + L + ++V +G I RE + + V G ++ IL +V Sbjct: 11 LILAGVAALVALGWVANSW-ISPDRVREKVIATLADQLDDVDVQV-GSARLRILGGIAVT 68 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 + + + + L G + + + ++ P + ++ G N Sbjct: 69 DLRLTRRGDPPDQPFLAVPSAVLFHDKEQLNHGRLVIKKVQLENPTIRIERAADGKWNVA 128 Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESD----QVYFLSDLNLQISARFLNIISPLS 181 + + + VKG + + D D + LQ + Sbjct: 129 --EVVRSGPADKPVPTFEVKGATVVVTDHAPDGLPATTFTGVQGTLQNDPLPTLTVQGSG 186 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITA-----NFPAKNKAISLKIQLFPLAYPIIIDLFG 236 G V G N N A + A + A +L P + Sbjct: 187 TAKPFGQVKVSGRLNRINSHLALTLKLPEFPVGPTAVSAARRFAPELAPHLAKLTAVANV 246 Query: 237 NLFW---NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 E P + + +K + +L ++ + +DG V++ Sbjct: 247 TAEVTYAPEGAPNWRHDVRLDVKDAKFEHPDLPKVLENITATVRSTDGRVKVDEATATLG 306 Query: 294 LPNSSTDEDNKTKVS---QDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344 + + + ++ L F + + + + + Sbjct: 307 DAKLRVALETRPEAPPAVPGDDPLKRFEDRLQRLDLAVTGVPLDDALFNRLPDK 360 >gi|90419926|ref|ZP_01227835.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90335967|gb|EAS49715.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 622 Score = 75.3 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 37/335 (11%), Positives = 97/335 (28%), Gaps = 53/335 (15%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGL 86 ID R+D + + G+ + V+G + +LP + + +RI I+ + Sbjct: 50 IDTEAARDDLVARLQTMTGETVTVEGDVTFSLLPRTRLVARHVRIGTAN----AFTIDTV 105 Query: 87 SMRAEFLPLLSGEIRVFDMYIDQPHLN---------------FYLSSKGVSNWFQRKSTM 131 + + L G + + + +P ++ G++ Q Sbjct: 106 VADLDAVDALIGTASIARVVLVRPEWRPLPETEPSSRTAEPVLVPAANGMAAPHQGSPLD 165 Query: 132 DMIHNV--------ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 V LE + ++ G + D +S+ NL ++ Sbjct: 166 GPRRLVRTLLERFHDLETLEIRSG--VYRPRAGDSRAGISNANLIVAQ-----------A 212 Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI-SLKIQLFPLAYPIIIDLFGNLFWNE 242 S ++ G+ ++ + S + P + ++++ + P+ G + Sbjct: 213 SSTAAIYVSGSFIWNGQPSELDLRLAAPRALLSGDPSEVRIALSSPPLTASFDGEATL-D 271 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRISRYKLQSIL 294 + SG + L + L G ++ + ++ Sbjct: 272 RNATISGALRIDAPSLSRSIEWLGESRPDTPDIGPVALDGTLLLAGSRANLQDTRITIAG 331 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 + + ++ + + D Sbjct: 332 SRGQGVMEAEF---GGDKPRVRGTLAFQTLDFDPF 363 >gi|332305193|ref|YP_004433044.1| hypothetical protein Glaag_0813 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172522|gb|AEE21776.1| hypothetical protein Glaag_0813 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 1062 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 36/388 (9%), Positives = 119/388 (30%), Gaps = 39/388 (10%) Query: 13 FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71 F + + + + + + G+ ++++ KI I PF + +I Sbjct: 23 FIITYLIYALIVGVVTPLILQSQLPSVLSDKTGRSVSIE---KIRINPFLLRASVANFQI 79 Query: 72 DQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG---VSNWFQ- 126 +++ + + L + F + + + + P+++ G N+ Sbjct: 80 NEQSSQAKFVHVNRLELDIGFWQSVFQFTPTIEHIDLVAPYVHLSRLEGGEATRFNFTDI 139 Query: 127 -------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 + I ++ + + G++ + D+ S +L +++ Sbjct: 140 IDTFSQSASEPTKPEEESAGIPHIRIGHFRLSQGQVLLSDKVSGTDIDYPELAFELNDLD 199 Query: 174 LNIISPLSIDSIKGSVIAE------GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 + T + ++ L Sbjct: 200 TQTTLAEISEDKTTPKTKNHYVFKLVTAEGGTAALNGQFQLAPFEIKGSVGLANIALAPL 259 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSV----AGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 +P+ +L + + +S+ +G + N +LS + ++ + K + Sbjct: 260 WPLSNEL-LEAKLTDGLLNFHIDYSLFEEPSGVRVRAANGQLSLSQLSIADSHK---PRI 315 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLN--FSENGAESMHDLNETDFFEEEEKKN 341 ++ ++ + ++ + + N + + L+ FS NG + + L + + + Sbjct: 316 TLALMQINDMSLDTKSKQVNINDIQL-NKPWLDGVFSPNGLDLVSLLTPKPAQKTVDSSS 374 Query: 342 KNDDLKKDDIQYSVNKKEEKDNSHDKEN 369 +N + + + + ++ Sbjct: 375 QNPSTTSTTPKDTAEETALSQQAVSTQS 402 >gi|319764894|ref|YP_004128831.1| hypothetical protein Alide_4242 [Alicycliphilus denitrificans BC] gi|317119455|gb|ADV01944.1| hypothetical protein Alide_4242 [Alicycliphilus denitrificans BC] Length = 1356 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 32/252 (12%), Positives = 68/252 (26%), Gaps = 13/252 (5%) Query: 31 DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 DFR E QA +G + + FP+V + + + ++ + + Sbjct: 50 DFRPQLEAQAQRALGVPVRIAAVSARSEGFFPAVELSGVALLDPQG-REALRLPRVVVAL 108 Query: 91 EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK-------STMDMIHNVILEKIH 143 LL + +YI+ P L+ G + ++ Sbjct: 109 SPRSLLR--LGFEQIYIEGPELDIRREQDGRIFIAGLSFRDTGETDSAAADWLFAQPEVA 166 Query: 144 VKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSIKGS-VIAEGTGNFDNKR 201 ++GG ++ D + L+ ++L + L L G F Sbjct: 167 IRGGTLRWSDALRGAEPLALTQVDLVLRNGALRHGIRLDATPPPDWGERFTLRGQFRQPL 226 Query: 202 SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261 + + Q+ DL G L + + V Sbjct: 227 LTTHGGNWQRWSGQMYAYFAQVDVSRLNRHADL-GTLQVRQGRGALRAWVDVQQGRVVGG 285 Query: 262 NLELSAKKSRLS 273 +++ + Sbjct: 286 AADMALGAVDAT 297 >gi|88706560|ref|ZP_01104264.1| secreted protein [Congregibacter litoralis KT71] gi|88699272|gb|EAQ96387.1| secreted protein [Congregibacter litoralis KT71] Length = 1141 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 31/262 (11%), Positives = 88/262 (33%), Gaps = 26/262 (9%) Query: 36 FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFL 93 E +A+ + +KI++K ++ + + ++ + + + L +F Sbjct: 38 IESRASEFLNRKISLKKAPQLRLSDGLHIALAEVALADADWAGEGPMLTVNALKAEIDFW 97 Query: 94 PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF---------QRKSTMDMIHNVILEKIHV 144 L +I V ++ID +L+ + G SN K + V+LE + + Sbjct: 98 SLFDEQILVNQLHIDGLNLHLHRDRDGRSNIPGLDRDQKNTTTKEPPSGLLPVLLEHMTI 157 Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204 + +++ +++S + L +L + + G G+ + Sbjct: 158 RNVQVRQSNEQSGKSLNLRVDSLT------------QDSHEEEGLRLRGQGSLQDYPWQL 205 Query: 205 KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE--KQPIYSGVFSVAGDFSKLLN 262 + ++ + + + ++L GN + + S ++G + Sbjct: 206 AVDSS-DLMSLRTGIDMSADVKGSLGDLNLEGNYQLPDLTELQNLSLTAILSGPMPPRVA 264 Query: 263 LELSAKKSRLSGNFKISDGNVR 284 +++ + +V Sbjct: 265 ELSPILEAQAPTKISLEVRDVT 286 >gi|170743921|ref|YP_001772576.1| AsmA family protein [Methylobacterium sp. 4-46] gi|168198195|gb|ACA20142.1| AsmA family protein [Methylobacterium sp. 4-46] Length = 580 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 63/368 (17%), Positives = 106/368 (28%), Gaps = 36/368 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R +L+ G +V L A + R G G + +LP P Sbjct: 4 RSILVLSGGACAVALAVAACQSWTVATPPAVAFVGRHLARAYGLGFEADGPTSLALLPAP 63 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + F+ +R+ ++ L M+ LL G+ + + L + + Sbjct: 64 RLTFRGVRLRN--GERLLAETSSLDMQLGLGGLLIGQAEAAAVTLTGARLILPDADDRWA 121 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 F R + L ++ + GGRI + D+ LSD+ L S Sbjct: 122 APFARLTARLAAGARPLRRLSLSGGRIAAGETGPDR---LSDVTLSASWPRAGAG----- 173 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK---NKAISLKIQLFPLAYPIIIDLFGNLF 239 + G + + + A P A L+ L + +DL G Sbjct: 174 ------LDLTGRFAWRGVPTTVALAAARPLDLARGGASPLRAALAWPSG--SLDLDGTGR 225 Query: 240 WNEKQPIYSGVFSVAGDFSKL--------LNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 W E P +G + D L + L G + G V + L Sbjct: 226 WQEG-PALTGEGRFSTDALPEVLGWLGCRAPLSPLLGRVSLEGRVEARPGEVAMPALHLV 284 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL--NETDFFEEEEKKNKNDDLKKD 349 + + D S + L S A DL + E Sbjct: 285 L----AGSAFDGAGAASLGPDGRLALSGTLAAERLDLPGLPSGIGAEALFALARWTEGDL 340 Query: 350 DIQYSVNK 357 D++ S Sbjct: 341 DLRLSAAA 348 >gi|153003727|ref|YP_001378052.1| hypothetical protein Anae109_0857 [Anaeromyxobacter sp. Fw109-5] gi|152027300|gb|ABS25068.1| protein of unknown function DUF748 [Anaeromyxobacter sp. Fw109-5] Length = 968 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 32/296 (10%), Positives = 86/296 (29%), Gaps = 31/296 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-F 61 +R L+ + + + R ++ + + + + V K+ + P Sbjct: 23 KRRLVRVAVTLLALFAVYTALGFLAAPALLRRVLVKEGSAALHRDVTVA---KVRVNPLA 79 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + + + ++ + E L +R L+ GE+ + ++ + +P L+ L++ G Sbjct: 80 LSLTIEGLAVKHRDGA-PFAGWESLYVRLAPHRLVLGELGLAEIRLVRPSLHVGLAADGA 138 Query: 122 SNWFQR-------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-------VYF 161 + V + ++ V+ + D Sbjct: 139 LTFQDLLEPEGQPAAAPPPPGEAQGGPRVSIGRLAVEEASVTFRDATRRPAFDTLLGPLT 198 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL-- 219 + + + + + + GT + RSA + K Sbjct: 199 VRLESFRTRGGGDSPYAFAGTTESGETFRWTGTVRTEPLRSAGTLAFEGIQLPKYAPYLQ 258 Query: 220 -KIQLFPLAYPIIIDLFGNLFWNEKQPIYS---GVFSVAGDFSKLLNLELSAKKSR 271 ++ + + L W + + + G +V + A K Sbjct: 259 DQLPADLHDGRLDFETRYELEWGAARRVLALAGGRLTVDRLAMGPRGVPDPAVKLS 314 >gi|296535680|ref|ZP_06897855.1| AsmA protein [Roseomonas cervicalis ATCC 49957] gi|296264004|gb|EFH10454.1| AsmA protein [Roseomonas cervicalis ATCC 49957] Length = 149 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 2/121 (1%) Query: 6 LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65 LI LG ++ G + L + R G+ + + G + I + P+V Sbjct: 13 LIVLGVAIALPAAGWVGLNLLLRDEVLRPRLIAAVEQATGRALTLSGPVGIKLSLVPTVT 72 Query: 66 FKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 + + + G + LPLL + + + +P L L ++G N Sbjct: 73 LQGVALANAPGGSRPQMLTARRVEAELALLPLLRRRLAFERVTLIEPDLLLELDAEGTPN 132 Query: 124 W 124 W Sbjct: 133 W 133 >gi|114706958|ref|ZP_01439857.1| asmA protein, assembly of outermembrane proteins [Fulvimarina pelagi HTCC2506] gi|114537508|gb|EAU40633.1| asmA protein, assembly of outermembrane proteins [Fulvimarina pelagi HTCC2506] Length = 606 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 42/387 (10%), Positives = 103/387 (26%), Gaps = 45/387 (11%) Query: 15 VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74 ++++ + R + + + G + + G I +LP + I I Sbjct: 2 LIVIVTVMPGFVLASDGARSELVAKMEALTGTPVEISGPISFSVLPRTRLVADRISIGSG 61 Query: 75 EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH-------LNFYLSSKGVSNWFQR 127 D I+ + + + L G + + + +P G + Sbjct: 62 VD----ITIDRIVADFDPVDALFGRATIARIVLVRPEHQPEIIVAEGEADEIGTTVLTVA 117 Query: 128 KSTMDMIHNVILEKIHVKG----GRIKIIDQESDQVYFLSD------LNLQISARFLNII 177 + + G R I + Q+ + + L+ N Sbjct: 118 SDISASVERDRNAAQMIAGLEDLARRAIDRLDQLQILEIRNGVWRPGLDEAGPTGISNAN 177 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN-KAISLKIQLFPLAYPIIIDLFG 236 ++ S + + G ++ + + + + A + + L + P+ +D G Sbjct: 178 LTITRSSSQSAFRMTGGFTWNGQPADIDMRVDSTANLRNGGTSNVSLSFSSPPLTLDFEG 237 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELS--------AKKSRLSGNFKISDGNVRISRY 288 + + P G F GD L+ L+G+ ++ + ++ Sbjct: 238 IMDF-GTLPRLVGRFEGRGDSFATTAAWLANSDYRIPQLGPVSLNGDLTLAGRTLEVTNA 296 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND--DL 346 +L+ + S + + + D E Sbjct: 297 ELRL------------AQSSGVGALEYDLDADRLDGTLAFETLDLTPVAEAIVPMPAGPF 344 Query: 347 KKDDIQYSVNKKEEKDNSHDKENQENF 373 + + NQ F Sbjct: 345 GFARPIEAEFARSAHLALRVSANQARF 371 >gi|330827098|ref|YP_004390401.1| hypothetical protein Alide2_4582 [Alicycliphilus denitrificans K601] gi|329312470|gb|AEB86885.1| Conserved hypothetical protein CHP02099 [Alicycliphilus denitrificans K601] Length = 1362 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 32/252 (12%), Positives = 68/252 (26%), Gaps = 13/252 (5%) Query: 31 DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 DFR E QA +G + + FP+V + + + ++ + + Sbjct: 50 DFRPQLEAQAQRALGVPVRIAAVSARSEGFFPAVELSGVALLDPQG-REALRLPRVVVAL 108 Query: 91 EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK-------STMDMIHNVILEKIH 143 LL + +YI+ P L+ G + ++ Sbjct: 109 SPRSLLR--LGFEQIYIEGPELDIRREQDGRIFIAGLSFRDTGETDSAAADWLFAQPEVA 166 Query: 144 VKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSIKGS-VIAEGTGNFDNKR 201 ++GG ++ D + L+ ++L + L L G F Sbjct: 167 IRGGTLRWSDALRGAEPLALTQVDLVLRNGALRHGIRLDATPPPDWGERFTLRGQFRQPL 226 Query: 202 SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261 + + Q+ DL G L + + V Sbjct: 227 LTTHGGNWQRWSGQMYAYFAQVDVSRLNRHADL-GTLQVRQGRGALRAWVDVQQGRVVGG 285 Query: 262 NLELSAKKSRLS 273 +++ + Sbjct: 286 AADMALGAVDAT 297 >gi|327403187|ref|YP_004344025.1| AsmA family protein [Fluviicola taffensis DSM 16823] gi|327318695|gb|AEA43187.1| AsmA family protein [Fluviicola taffensis DSM 16823] Length = 968 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 27/250 (10%), Positives = 73/250 (29%), Gaps = 18/250 (7%) Query: 29 WTDFREDFERQATLIVGKKIAVKGGIKIHI---LPFPSVFFKDIRIDQKEDGS--FESKI 83 + +E ++ + + + ++ + P ++ D ++ + + + I Sbjct: 41 KDEIKELVLKEVSKSLKADVTIE-DFDLTFLSTFPNVTIQLYDTKVTGRTEFKGVELANI 99 Query: 84 EGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMI 134 + + ++ G EI + +++I + + G +N+ Sbjct: 100 KTIEAHVGLWDVIGGDEIEIDEVHISDAKFDVRVDPAGKANYDIVIPEDEKPVADQGPSK 159 Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 + L++ + ++ DQ SD + +LN I + V E Sbjct: 160 FKMSLKEYSLNNIQLVFDDQASDMYANIKNLNHTGEGDLTADIIDFETSTKIDEVTLEMD 219 Query: 195 G--NFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVF 251 G ++ + K ++ A + L G + Sbjct: 220 GLSYLSKVKTDADVNLLMEFKEDDSKFTLKDNSFALNNFHMSLDGFYQMLKDHSQMDLKL 279 Query: 252 SVAGDFSKLL 261 + K L Sbjct: 280 NTKEISFKDL 289 >gi|294788826|ref|ZP_06754067.1| putative AsmA family protein [Simonsiella muelleri ATCC 29453] gi|294483308|gb|EFG30994.1| putative AsmA family protein [Simonsiella muelleri ATCC 29453] Length = 705 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 32/348 (9%), Positives = 97/348 (27%), Gaps = 20/348 (5%) Query: 3 RRVL---IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59 RR + L + ++ L GA+ + + + +KI ++ + Sbjct: 10 RRWFKNTLILSVVTAIGLGGAYATFYHLSSFERLQRLSTDVMQGSTRKITFDAQMERQLF 69 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 P P+V K++ + + + + I+ +S+ + + G+ + + ++ Sbjct: 70 PRPTVVLKNVMLSETDGRTPAMNIKQVSVGVAWTSVF-GDWAIDKLVLNDLATVITRDDN 128 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 G N+ + V +I++ G++ + Q + L+ ++ + Sbjct: 129 GSWNFADLFKQQNQ--KVKFNRININNGQVML--QAFGKRVELNQIHYNQIRQSDGKSPY 184 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 + + E N + + L+ L + Sbjct: 185 IFTANAMNPFWNELQLNVQGH----VAQTPEGIISPDMILQFTGHETGGAFSGSLVSKVG 240 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 Q + + +++ + + ++ ++ + Sbjct: 241 LKNNQFTSDDNKLIIRTDRLTGHADINI------AHIGSENDHLLLNNINSVFTGSLNDY 294 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347 + Q + + E +L + N N Sbjct: 295 RLNGTLTSRQAKLDP--AQLASDEITVNLTAKTATSDNLNVNLNAPAT 340 >gi|238026291|ref|YP_002910522.1| hypothetical protein bglu_1g06250 [Burkholderia glumae BGR1] gi|237875485|gb|ACR27818.1| Hypothetical protein bglu_1g06250 [Burkholderia glumae BGR1] Length = 1405 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 98/324 (30%), Gaps = 35/324 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILP 60 R VLIG ++ V + + R E + + ++ + G + H Sbjct: 29 RVVLIGGATIYFVAASSYLGLRYVLLPQVDRLRPRIESFVSDKLHAEVRI-GRLAPHWSG 87 Query: 61 -FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 P V + I ++DG+ I + + LLS + + +D P L + Sbjct: 88 MQPGVDVTALTI--RKDGTTALTIPHATAAIAWGSLLSLAPTLSSLVVDAPDLLIERNRD 145 Query: 120 GV--------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLNLQIS 170 G + + + + I ++GG ++ D + + L+ + L + Sbjct: 146 GTLMVAGVAVPTTRRSGNDAFSTWLLRQQAIVLRGGTLRWRDAQRNAPELTLTGIRLAVL 205 Query: 171 ARFLNIISPLSIDSIKGSVI--AEGTGNFDNKRSAFKIT----------ANFPAKNKAIS 218 L L + + F ++ A + P ++ Sbjct: 206 NDGLVHRLALQAPANGTLFAGPLDFRARFTHRPLAAIGRPANWTGEAYLSTGPVDLPTLA 265 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKSRLSG 274 + + AY +D L + + + ++G L L + Sbjct: 266 RYLPVPLTAYAGRLDNTIWLGFQDGRLR-DAHGMLSGADVALRVRPTQPRLDIPTASFGW 324 Query: 275 NFKISDG---NVRISRYKLQSILP 295 N + G + ++ + P Sbjct: 325 NLALDPGHDYTLNLTDLHAELGQP 348 >gi|121596302|ref|YP_988198.1| hypothetical protein Ajs_4018 [Acidovorax sp. JS42] gi|120608382|gb|ABM44122.1| conserved hypothetical protein [Acidovorax sp. JS42] Length = 1418 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 29/207 (14%), Positives = 65/207 (31%), Gaps = 16/207 (7%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILP 60 R L+ L + ++ + +I DFR E+QA +G + + Sbjct: 20 RWGLVALVTFWLLLAAAWGGLHGWIVPRIGDFRPQLEQQAQRALGVPVRIHSISARSEGL 79 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 PSV KD+ + + ++ + + LL +YI+ P L+ G Sbjct: 80 IPSVELKDVALLDAQG-REALRLPRVVVALSPRSLLRFG--FEQIYIEGPELDMRRERDG 136 Query: 121 VSNWF-------QRKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLNLQISAR 172 + ++ ++ G ++ D++ S + L+++++ + Sbjct: 137 RIVIAGLAFRDSAEGDSAAADWLFSQAEVAIRAGTLRWTDEQRSAEPLALTEVSVVLRNS 196 Query: 173 FLNIISPLSIDSIK---GSVIAEGTGN 196 L G Sbjct: 197 ARRHQVRLDATPPAEWGAPFTLRGQFR 223 >gi|162449377|ref|YP_001611744.1| hypothetical protein sce1107 [Sorangium cellulosum 'So ce 56'] gi|161159959|emb|CAN91264.1| hypothetical protein sce1107 [Sorangium cellulosum 'So ce 56'] Length = 1493 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 49/392 (12%), Positives = 107/392 (27%), Gaps = 66/392 (16%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP-SVFF 66 L +F+++ + + R R+ ++ +++ + + + +P V Sbjct: 24 VLCAVFALIGAIPLALGFLVRTETVRAWAARETAALLQRELGITARYDVRVQAWPLMVGL 83 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126 + +D + G+ ++E +++R LL+G I D+ I P + L + N Sbjct: 84 NRLVVDSSDGGAPFLELERVAIRPRLFSLLAGHIDAGDVEIIGPRVRAVLKDGELRNLTL 143 Query: 127 RKSTMDMIHNVI---LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS----- 178 + + L + + R+ + D+++ I+ Sbjct: 144 PSTGGGGGGGLDRAPLSSVAITDARVDLTIDNVRVQATEVDVDVSAEPSDAFEIAMRSGL 203 Query: 179 --------------------------------PLSIDSIKGSVIAEGTGNFDNKRSAFKI 206 ++ +I EG +FD Sbjct: 204 VSVVRTHPAPGHEAEEDSVDEDVVCRFDTRVRVEPGRALVRRLILEGAADFDPDPGTAPP 263 Query: 207 TANFPAKNKAISLKIQL-----FPLAYPIIIDLFGNLFWNEK-------QPIYSGVFSVA 254 A + + L++ P I+ P SG S+ Sbjct: 264 CALQDGDWRRVELELGALRAVGLGDGMPHRIEGRVRARLPVPIVHRFVNLPPASGSVSLD 323 Query: 255 -GDFSKLLNLELSAKKSRLSGNFKIS----DGNVRISRYKLQSILPNSSTDE-------- 301 + L R+ G + DG V ++R + + Sbjct: 324 VDAEYDAASAPLGLSLPRVKGTLLLDRPGLDGRVFVTRLAGKVSTTPDAVQLSDADVAWA 383 Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 D K+S E DL + Sbjct: 384 DGTLKISSAEIKPFEKGVPLQAGPIDLANVEL 415 >gi|91793393|ref|YP_563044.1| hypothetical protein Sden_2039 [Shewanella denitrificans OS217] gi|91715395|gb|ABE55321.1| protein of unknown function DUF748 [Shewanella denitrificans OS217] Length = 1061 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 43/329 (13%), Positives = 111/329 (33%), Gaps = 29/329 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 + ++ + + V + +P F E + + +G+++ + IK+ Sbjct: 20 KASMLTIVSYAAFVALLGLALPFF-----AHEHLPKWLSQQLGREVQID-VIKLDPF-EL 72 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGV 121 SV I+I + + + ++ LS F + G +R+ + I QP ++ + Sbjct: 73 SVEIAAIKIKEADGNTDFFNLQSLSADFAFWDSIKHGGLRLNSVEITQPSVSVARYANEK 132 Query: 122 SNWF----------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 N + ++ + +E + + G + D S +D+ Sbjct: 133 LNISDIVHRLQQLTANDATKPKDASPAKPLSFAIETLALTQGHFTLDDMSSGLQLNYADI 192 Query: 166 NLQISARFLNIIS--PLSIDSIKGSVIAEGTGNFDNK-RSAFKITANFPAKNKAISLKIQ 222 +++ + S G+ +++ ++ +++ Sbjct: 193 TIRLDNVDSQGLLAKTTSPQEQANLYDIHLKGDANSEFKTNGAFQLVPFKLQGELNVDA- 251 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GNFKISDG 281 L Y +D + + Q G ++++ L K+ +LS +I D Sbjct: 252 LPLAQYWHAVDKLFKVKLEQGQLNVKGHYALSLSKDPQAALTWRVKQGKLSVNQLQIDDK 311 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQD 310 + S L +++ + + K+S D Sbjct: 312 QQKKSILSLNALVLENIRASSQERKLSID 340 >gi|220905440|ref|YP_002480752.1| AsmA family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869739|gb|ACL50074.1| AsmA family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 695 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 59/371 (15%), Positives = 117/371 (31%), Gaps = 55/371 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R L+ + + + +D GK + + KI P Sbjct: 1 MKRFLLWTMGIVLAAVAVLAVMLGRMDTDFVIRQIADATAGATGKPLVFESSPKISFFP- 59 Query: 62 PSVFFKDIRIDQKEDGSFES-KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK- 119 P V F R Q E + ++G EF+PLLSG + + ++ +D P + +++ Sbjct: 60 PGVSFGQARWGQAEQDDSLAVSVKGGMAELEFMPLLSGNVVLREVRLDNPTVTVRQNAQV 119 Query: 120 -----------------------GVSNWFQRKSTMDM------IHNVILEKIHVKGGRIK 150 N KS V L+++ ++ G + Sbjct: 120 IKNGKQPTDAAAAEKNAAADNGSARENTSPAKSVKPDAAPRDAAPPVELKRLVIRQGSLN 179 Query: 151 IIDQESDQVYFLSDLNLQISARFLNIISPLSIDS-------------IKGSVIAEGTGNF 197 I D + Q +SDLN+ + D I G++ + Sbjct: 180 ITDTQ-GQDIKISDLNISAENLRPEQETTARCDFTIALGDAPGTPGHISGNLALSAKLRY 238 Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257 + + L L A P+ +++ G+L N + + Sbjct: 239 APPMLTLRQASLTFN-----PLSGPLPKEAGPLQLNIEGSLDLNIMRMRVDKGWLATPQA 293 Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN---KTKVSQDEENL 314 + E + +GN +I +++ ++ P + D K +++ N Sbjct: 294 RLGIQGEAAFSPPAFTGNAEIDGSPRKLAAMAGLNLKPVAQGVTDGLNLKARLAYGN-NS 352 Query: 315 LNFSENGAESM 325 LN S+ A Sbjct: 353 LNLSDIHARVD 363 >gi|159903603|ref|YP_001550947.1| hypothetical protein P9211_10621 [Prochlorococcus marinus str. MIT 9211] gi|159888779|gb|ABX08993.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9211] Length = 1326 Score = 74.5 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 111/356 (31%), Gaps = 16/356 (4%) Query: 15 VVLVGAFTVPLFIDW------TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68 ++ +G FID + E+Q + +G + + + + Sbjct: 19 LIFLGGSFSYYFIDKALDKFVDTYASKIEKQLSSQLGHPLEIGSYNGLRPW---GIAIGP 75 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128 ++ + G++++ L L V Q LN +++ W Sbjct: 76 SKVLVGLKDKSSASASGVTIQLAPLASLINRRPVAIFTPKQTKLNLKANNENSY-WVFGN 134 Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188 S + N+ L + +I + DQ S ++ + ++L + G+ Sbjct: 135 SISKRVPNIDLVVRLREPAKISL-DQYSLEIDAKTQATFNPRKKYLKGRFFFDL-GENGA 192 Query: 189 VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248 + G N++ A + + L+ ++D +L +++ Sbjct: 193 LQLSGNSNWERFTFQGDARAKRIRLKSLQDIFLNKLNLSTQGVVDGNFSLSLDKESVSCK 252 Query: 249 GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308 G V K N E S S S +++S + + ++S K + Sbjct: 253 GRLKVGDVRIKHPNYENSFLSDLTS--INCSHRGIQLSSKEWKYGPMSAS--VKGKLPIK 308 Query: 309 QDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364 + +N S + S + ++ ++ + ++ +N N Sbjct: 309 KPPDNSFAISSIISLSKDNDSQVKLDASVPISFDSNGIGIGELAAQINTDSFNLNL 364 >gi|24216931|ref|NP_714412.1| hypothetical protein LA_4232 [Leptospira interrogans serovar Lai str. 56601] gi|24198320|gb|AAN51430.1| hypothetical protein LA_4232 [Leptospira interrogans serovar Lai str. 56601] Length = 693 Score = 74.5 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 105/343 (30%), Gaps = 46/343 (13%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS 78 VPL I +++ G ++ V G + + PFP + K+++I +++ Sbjct: 40 SFTLVPLLIREDFYKDFILTAIEQKTGLEVKV-GSSDLVLFPFPGIELKEVQI--RKEEL 96 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------------- 124 + + + + LL ++ + D+YI +N + + G + Sbjct: 97 VIGISDRIKVDISWFGLLGQKVEIRDVYISGGKINLHKNKDGSVDLIEFFQQDTEDSENS 156 Query: 125 ----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLN 166 + I V L+ + ++ I D + Y + S+ Sbjct: 157 NHNHTIRIFDPSSTVESSSFISPKEIFKVGLKNVEIENFYIHYQDDTHRRTYEIYLSNSA 216 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF---KITANFPAKNKAISLK--- 220 L IS N + L S G+ N D + + K + ++S+ Sbjct: 217 LNISFYGNNFVLTLQGKLDGQSFQIYGSTNLDEFPTTYENSKFQSTISLDKCSLSIFRDL 276 Query: 221 IQLFPLAYPIIIDLFGNLFWN---EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 + +FP A L G + + + ++ + K N K + Sbjct: 277 LTIFPNADFSKTILNGTIKIDKVPNRSINFNVIAQAKNFAYKGGNPFGDI-KVNMEFRLD 335 Query: 278 ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320 + + + + + + + + N Sbjct: 336 LPNKKLEFPYISI-LWPGIAEGNAKGTVLWNYKTNVSFQVTAN 377 >gi|119510336|ref|ZP_01629471.1| hypothetical protein N9414_15772 [Nodularia spumigena CCY9414] gi|119464973|gb|EAW45875.1| hypothetical protein N9414_15772 [Nodularia spumigena CCY9414] Length = 1895 Score = 74.5 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 45/380 (11%), Positives = 108/380 (28%), Gaps = 32/380 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +L R I LG L V + G + T + + + + + Sbjct: 23 LLSRGGIALGVLMLVTMGGGIWRLWSFVQNELTPLAASGLTNTLNRPVNLGEVTGFSL-- 80 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 V F I + ++ + + + L+ D+ + P + ++G Sbjct: 81 -RGVEFGASSIPATSTDPDRAVVDAVEVGFDPWQLIFQRQLKLDVTLVNPDIYIEQDNQG 139 Query: 121 VSNWF-QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ----------VYFLSDLNLQI 169 + L+K+ + G++ ++ Q D+ S +N Sbjct: 140 RWITTKIAPQGKQALIKTDLDKLRFRNGKLVLLRQVGDEGVISSSSTIPPVAFSQVNGTA 199 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 N + + S G + + A +++ + + P Sbjct: 200 QLLKENQLIKFQVRGEADS---GGNVALQGEVIPQTLAAKLQLRSQDLFAAQITDLIKLP 256 Query: 230 IIIDL---FGNLFW---NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 + GNL ++ P+ G ++ G ++ N+ + ++ G + V Sbjct: 257 FDLQAGKVNGNLQIQLTPKQPPLLFGNANLQGVTLQIPNVPQAFLNTQ--GAIRFQGREV 314 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE-NGAESMHDLNETDFFEEEEKKNK 342 +++ + + + + A + LN T + Sbjct: 315 QLNNLASNYGKI--PLVATGIIDPTTGYKLAGRVNAVSVANAQGSLNITAPVPVTGQLKA 372 Query: 343 ND----DLKKDDIQYSVNKK 358 N + K + SV Sbjct: 373 NLQMLGSITKPVLSGSVATI 392 >gi|225619878|ref|YP_002721135.1| hypothetical protein BHWA1_00940 [Brachyspira hyodysenteriae WA1] gi|225214697|gb|ACN83431.1| hypothetical protein BHWA1_00940 [Brachyspira hyodysenteriae WA1] Length = 1087 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 41/339 (12%), Positives = 97/339 (28%), Gaps = 25/339 (7%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70 L +++VG ++ + + E +K+ + G K +L FP V ++ Sbjct: 37 ILLFLIVVGIAGARIYFNNERMKNLIENIVYSATNRKLEI-GDFKYGLL-FPKVEMSNVV 94 Query: 71 IDQKEDGSFE--SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128 + ++ + E KI+ ++ L ++ V D+ ID ++ + G N Sbjct: 95 LYNSDNFNNEENIKIDNFRLKFSLFSLFFLKLHVQDLSIDNLYVYMFTDESGNWNLPDMP 154 Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS-IDSIKG 187 + + E + + + +++L L+ ++ P + + + Sbjct: 155 PSEPKEEDTNKEPFDFSKLDF-LKLKADVENIRINNLALKADSKSFLTNVPNNGLIASLS 213 Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ------------------LFPLAYP 229 + + + + + P K I LK LF L Sbjct: 214 NYNLHLDLHTKRFSLSQVMGISAPEVLKDIYLKSFISNSLAYNDSSIFFNDNPLFNLDVS 273 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 + G +E + + + + I +V I Sbjct: 274 YPKNPDGTENKDEIIITFDFEIDDPNFSYNGKKRDDMQFAAHFLARYNIRTQSVSIENLS 333 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328 + + + +N A D Sbjct: 334 SELLN-DEILKVIASANQIFSGNIGVNLDTLYARLNLDK 371 >gi|52841135|ref|YP_094934.1| hypothetical protein lpg0900 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628246|gb|AAU26987.1| hypothetical protein lpg0900 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 522 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 52/403 (12%), Positives = 114/403 (28%), Gaps = 33/403 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +L ++L+ L V + + + I ++ + T I K+ + G I + P Sbjct: 12 LLGKILLAFTALMIFVSITLWILAKNIKPETIKQLVSNKITAITHKQSQIDGTISWQLFP 71 Query: 61 FPSVFFKDIRIDQKE-DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + F I I + + ++ I+ L + + PLL G ++ ID L + Sbjct: 72 RPGLKFNKIHIGNENLNDNYSLLIDTLLLNLKITPLLKGHFVFSEINIDGLKLFINQENN 131 Query: 120 GVS-----NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL---NLQISA 171 N Q +T ++K+ + G+I + + V + + Sbjct: 132 EKPLSSEKNANQYNTTTYPNEQFAIQKLLLSHGQIILNSKGHSTVLKNIQIGAEQFNLKN 191 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 ++ + A+ NF R + + + I+ I+ Sbjct: 192 SPFSVQIKAKLTDAAFLQTAKANINFKG-RVSLSPSIIDELNSGISKSSIEGQLQIQNIL 250 Query: 232 IDLFGNLFWNEKQPIY--SGVFSVAGDFSKLLNLELSAKKSRLSGNF-------KISDGN 282 ++ F N + F+ + + Sbjct: 251 LNQFAIKKINTTLKTHKRDIQFNPLTLSLYNGESIGDMDYVIATQQLLINQTATNLDGKQ 310 Query: 283 VRISRYKLQSILPNSSTDEDN--------------KTKVSQDEENLLNFSENGAESMHDL 328 + S K +I N K ++ + + N + + + + Sbjct: 311 LITSLLKHPAISGNLDYSIHASIPLKALSIESLVSKGTITLKDGEVYNINLDQLLNNLKV 370 Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371 E K D Q + K + + Q Sbjct: 371 KLNSLMTETPDNIKKLAQSADWDQNKNTQGNTKFKLANFKFQL 413 >gi|110632529|ref|YP_672737.1| AsmA [Mesorhizobium sp. BNC1] gi|110283513|gb|ABG61572.1| AsmA [Chelativorans sp. BNC1] Length = 603 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 49/366 (13%), Positives = 100/366 (27%), Gaps = 56/366 (15%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI--DQKEDGSFESKIEGLSMR 89 R Q + G + + +I++ P D+ + + +G E + + Sbjct: 36 VRNSIAYQMSAWSGYHVRLDETPEINVWP-LQAVLHDVTLLDSEGSNGQTVLDAERIDID 94 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNFYLSSK----------GV-----------SNWFQRK 128 L L G+I M + +P L G + R Sbjct: 95 LSALAALRGDIVFTRMRLIRPVLRVRQRGDELQPISPQGWGKVPQSVEAAKQAVSAAPRN 154 Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188 + N KI + GRI D ++ + L ++ Sbjct: 155 PDTAFLPNDSFGKIEFEEGRIVAEDGQNQSDIV------------TSFSGTLDWPALNRQ 202 Query: 189 VIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 TG + + + + P + + L A P + G +E + Sbjct: 203 ASLSATGIWHGESISLTASIAEPLILFGGGNTAVSLSLKAPPANLSFEGMASRSENGFV- 261 Query: 248 SGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRISRYKLQSILPNSST 299 G F+++ L ++ +S + ++ + L + Sbjct: 262 DGDFTLSAPSLSRLVEWTHSRMPLASRIGPFSISARMLGNPKRLKFEQAALTL----DKS 317 Query: 300 DEDNKTKVSQDEENL-----LNFSENGAESMHD-LNETDFFEEEEKKNKNDDLKKDDIQY 353 + V+ D L F ++ D N EE+K+ D++ Sbjct: 318 AAEGLLDVTFDSSRPTVAGTLAFDTLNLRALLDAFNPLSTGNEEQKEPGAQTELDFDLRV 377 Query: 354 SVNKKE 359 S Sbjct: 378 SAASAT 383 >gi|332284685|ref|YP_004416596.1| hypothetical protein PT7_1432 [Pusillimonas sp. T7-7] gi|330428638|gb|AEC19972.1| hypothetical protein PT7_1432 [Pusillimonas sp. T7-7] Length = 1220 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 38/289 (13%), Positives = 91/289 (31%), Gaps = 22/289 (7%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWT--DFREDFERQATLIVGKKIAVKGGIKIHI 58 +L+ V + V+ + ++ ++R ERQ + + +++ G I I Sbjct: 8 ILKLVGKIALIAYFVLGLLFLGARYWVFPNVNEWRPQIERQLSQALNADVSL-GSIAIDW 66 Query: 59 -LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 P + D+++ E G + + LLSG++++ + L Sbjct: 67 KGLNPKLKALDVQLAD-EQGRRLLAVPEAQATISWRSLLSGDLQLVMLQASGLDLTLRRD 125 Query: 118 SKGVSNW------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSD 164 + I ++ ++ ID+ + L Sbjct: 126 LDDQVWVMGRSFSLGEPMSSPEDVGNAADWLLGQRDIMLRSATLRWIDETRNAPPLVLER 185 Query: 165 LNLQISARFLNIISPLSID---SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221 + L++S R + L D ++ S+ G + + + N ++ Sbjct: 186 VALRLSNRQADHRFILQADIPEALGKSLDLRGEFLHTPTKDSERFDLNQGRGQLYAHVE- 244 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270 + PL + +D+ +L + F G S ++ + Sbjct: 245 NMQPLGWAPWVDMPRSLKSGQVSVRSWLKFQAGGIESLTSDVTVKNGYW 293 >gi|256423529|ref|YP_003124182.1| AsmA family protein [Chitinophaga pinensis DSM 2588] gi|256038437|gb|ACU61981.1| AsmA family protein [Chitinophaga pinensis DSM 2588] Length = 1031 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 29/328 (8%), Positives = 87/328 (26%), Gaps = 38/328 (11%) Query: 31 DFREDFERQATLIVGKKIAVKGGIKIHIL---PFPSVFFKDIRIDQKEDG--SFESKIEG 85 + + + ++ P ++ D+ + Sbjct: 37 KIKTWANNSISTELNFS-----KARLSFFNHFPSLTLTLYDVSLKGSAPFEHDTLVTANA 91 Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------FQRKSTMDMIHNVI 138 +S+ + S +R+ ++Y+ + +++ + +G N+ ++S ++ Sbjct: 92 VSLGVNLGSVFSKTLRIDEIYLTKGNIHVLVDGEGRPNYNVYQSSAGAKESADSSGASLK 151 Query: 139 LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD 198 +E+I + I D+ ++N + L S+ Sbjct: 152 IERIQLDHCGIIYHDKSLGLYIRAREVNYLGKGDLESSQFDLFSKINIASLDLSYGEVPY 211 Query: 199 NKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257 + K+++ + + + L G + S Sbjct: 212 IQSKKLNGDLITRINTKSLNFSFERNDLKINQLPVKLNGAFSFLRNGYKMDFRLSSGAST 271 Query: 258 SKLLNLELSAK----------------KSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 L L A + L+GN+ + + + + Sbjct: 272 LAALFSALPADYVSWMEQTEIKGDAEVSASLTGNYIAKTNKM--PDFSFNIKVRDGVIAH 329 Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLN 329 + S+ ++ L+F + + Sbjct: 330 TGAS--SKVQQLRLDFQTKLPQMNTEKF 355 >gi|90021075|ref|YP_526902.1| hypothetical protein Sde_1428 [Saccharophagus degradans 2-40] gi|89950675|gb|ABD80690.1| AsmA [Saccharophagus degradans 2-40] Length = 711 Score = 74.2 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 39/348 (11%), Positives = 97/348 (27%), Gaps = 39/348 (11%) Query: 13 FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID 72 ++G + L +D + + Q G + + P ++ DI + Sbjct: 15 AVFAIIGLAALILTLDINRLKPIIQTQLEKQ-DISATFTGDLSWTLYPSLAIKANDIALK 73 Query: 73 QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS--------------S 118 ++ ++I G + +PLL I V ++ + + + + + Sbjct: 74 HAQNNQNLAQIGGAVFSVKLMPLLQRNIEVNELSLTNSEIWYAPNTLELLSGNTTTALAT 133 Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD------QVYFLSDLNLQISAR 172 N + N+ + K+ + +++ + + D+NL+ + Sbjct: 134 NNSDNPSNESESASQQINLAILKVAANNVTAHVTGEDNTTSDFTIEQFTAYDINLEGQSF 193 Query: 173 FLNIIS-------PLSIDSIKGSVIAE---GTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 L + + P+ G + + + + A A++K L + Sbjct: 194 PLELKTIIALPQQPVIRTFAAGRIAISPSTSSLTSSELEATIEFGAAQAAQSKNAQLTVT 253 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 DL P + N ++ ++ + + Sbjct: 254 TANTTLNWAQDLDLTTTLAISSPNVRDLLKALNIEIDTHNPQVLNGL-EINSDITLKQQQ 312 Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQD---EENLLNFSENGAESMHD 327 + + KL T KV+ + E D Sbjct: 313 LALDNIKL----SLDKTRATGNIKVNLAQNTGLPPTAVNLAIGEINVD 356 >gi|330998928|ref|ZP_08322655.1| hypothetical protein HMPREF9439_00272 [Parasutterella excrementihominis YIT 11859] gi|329576142|gb|EGG57661.1| hypothetical protein HMPREF9439_00272 [Parasutterella excrementihominis YIT 11859] Length = 977 Score = 74.2 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 41/403 (10%), Positives = 110/403 (27%), Gaps = 41/403 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + L + + ++ A IVG+ I + ++ PF Sbjct: 1 MGKKLWITTGIIGALAAAYTAGGFLGVPYGVNWALKKYAEPIVGRTITTQ---EVKFNPF 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 K + + QK+ + L + + L V + ID + + Sbjct: 58 TLQFSVKGLNV-QKDGEPALLSVGSLQTKVLWDSLFKLSPLVQYITIDGLNSTVIRTGLD 116 Query: 121 VSNW-------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 N+ + + D + I + I + D+ +V ++DLN Sbjct: 117 TFNFSDIIQRIQEMPTSPEEEKKDDKPLQFSIGNIKLTNSSITLDDKFRHKVDKVTDLNF 176 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 + + + + + + NF+ + A + K + + L Sbjct: 177 ALP------LISNFQNDVDVPITPDLKFNFNGEPFAINAESVPFTPGKKTGVNFTVTGLN 230 Query: 228 YPIIIDLFG---NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG---------- 274 N+ + + + ++ G Sbjct: 231 LENAASFNPIPLNVKVTKGTMDCAFNLDFEKKQGEENAYLRLKGTVKMKGVGLEDELGKA 290 Query: 275 --NFKISDGNVRISRYKLQSILPN-SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331 + + + + + + N + V +++ LN + + Sbjct: 291 YQIIGVKEIDANLKEFAFFRQNLDIGEIQIHNPSVVVIRDKDSLNLVQLLTHI-VKEQKA 349 Query: 332 DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374 ++ ++ + L +D+ + + D + NF+ Sbjct: 350 QAKQDAKEAKEKATLPEDEKKTPNDWTWNIDKVSVRNGIINFT 392 Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 51/408 (12%), Positives = 110/408 (26%), Gaps = 75/408 (18%) Query: 18 VGAFTVPLFIDWT---------DFREDFERQATL-IVGKKIAVKGGIKIHILPFPSVFFK 67 G P +D D + ++ + + KG +K+++ S + Sbjct: 437 GGIVITPFSMDLNLQSSGLSIADLTPYISQYSSAHVTQGTFSNKGELKLNLAKDVSFSYS 496 Query: 68 ---DIRIDQKEDGSFESKIEGLSM---RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 D+ D + + ++ L +I + + + P++N ++ G Sbjct: 497 GNADVASLNVTDKQGAAAVSLKNLAVGGISVSGLSPLQISLGTIALTSPNVNVVMNKNGS 556 Query: 122 SNWFQRKSTMDMIHN---------------------------VILEKIHVKGGRIKIIDQ 154 N + + + + KI + GR++ D Sbjct: 557 INLASLGTPSNAPAPAATTDKPAASKPQSKAQASSGSSSAPAINVGKITLTDGRVRYTDN 616 Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214 + + L+ NL S + + KG+ + G + T N Sbjct: 617 SIEPTFKLNASNLAGSLSNYSTTT-------KGNATVDVKGLLNGTPMNISGTINPFESK 669 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLF---WNEKQPIYSGVFSVAGDFSKLLNL-------- 263 +++K ++ L+ P + Y G F + D N Sbjct: 670 LKLAMKGEVTSLSLPAFSPFSAKFTGHPIEKGLLTYKGAFDINQDKLTSENALVINKLEF 729 Query: 264 --ELSAKKSRLSGNFKISDGNVRISRYKLQS---ILPNSSTDEDNKTKVS-QDEENLLNF 317 ++ K L +S R + L + V Sbjct: 730 GSQVPDAKDALPVGLAVSLLQDRQGQIDLNIPVSGSLDDPEFSVGGIIVKVIVNLISKAV 789 Query: 318 SENGAES-------MHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358 + A DLN F + ++ +K +I + Sbjct: 790 TAPFALIGSMFGGEDMDLNNLQFASGSARLDEKT-IKALNIVAKAMQD 836 >gi|197116542|ref|YP_002136969.1| hypothetical protein Gbem_0142 [Geobacter bemidjiensis Bem] gi|197085902|gb|ACH37173.1| conserved hypothetical protein [Geobacter bemidjiensis Bem] Length = 541 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 92/260 (35%), Gaps = 20/260 (7%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV-GKKIAVKGGIKIHILPFPSVFF 66 + + +++ F FID R E++ + G + + + ++ S+ Sbjct: 24 WIVGIVVALVLIVFIASFFID-EPLRRATEKKMNQSLKGYSVRL-PKLHFSLI-GLSITL 80 Query: 67 KDIRID-QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF---YLSSKGVS 122 K + + Q ++ L + +LSG++ +M +D P ++ L S+ S Sbjct: 81 KGLTVSQQAHPEPPVAEFPYLRASVHWREILSGKLVG-EMRLDDPKIHINLTQLKSEAKS 139 Query: 123 NWFQRKSTMDMI----HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 ++ + + + + + I ID+++ + LS+L+L+ + + Sbjct: 140 KVPMKEKGWQQAVEAIYPLKINHLKINDASITYIDEDAKRPLVLSNLDLEANNIRNIHLP 199 Query: 179 P---LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 S ++ + G G D K + P LK++ P+ Y + Sbjct: 200 DKVYPSSFHLETDIFKTGHGTVDGKANFLA----EPTPAVKADLKLEKVPIDYFQPVLAR 255 Query: 236 GNLFWNEKQPIYSGVFSVAG 255 N+ +G Sbjct: 256 YNMSVQGGALSGNGDIEYGR 275 >gi|45659203|ref|YP_003289.1| hypothetical protein LIC13386 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602449|gb|AAS71926.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 693 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 105/343 (30%), Gaps = 46/343 (13%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS 78 VPL I +++ G ++ V G + + PFP + K+++I +++ Sbjct: 40 SFTLVPLLIREDFYKDFILTAIEQKTGLEVKV-GSSDLVLFPFPGIELKEVQI--RKEEL 96 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------------- 124 + + + + LL ++ + D+YI +N + + G + Sbjct: 97 VIGISDRIKVDISWFGLLGQKVEIRDVYISGGKINLHKNKDGSVDLIEFFQQDTEDSENS 156 Query: 125 ----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLN 166 + I V L+ + ++ I D + Y + S+ Sbjct: 157 NHNHTIRIFDPSSTVESSSFISPKEIFKVGLKNVEIENFYIHYQDDTHRKTYEIYLSNSA 216 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF---KITANFPAKNKAISLK--- 220 L IS N + L S G+ N D + + K + ++S+ Sbjct: 217 LNISFYGNNFVLTLQGKLDGQSFQIYGSTNLDEFPTTYENSKFQSTISLDKCSLSIFRDL 276 Query: 221 IQLFPLAYPIIIDLFGNLFWN---EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 + +FP A L G + + + ++ + K N K + Sbjct: 277 LTIFPNADFSKTILNGTIKIDKVPNRSINFNVIAQAKNFAYKGGNPFGDI-KVNMEFRLD 335 Query: 278 ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320 + + + + + + + + N Sbjct: 336 LPNKKLEFPYISI-LWPGIAEGNAKGTVLWNYKTNVSFQVTAN 377 >gi|88606722|ref|YP_504677.1| hypothetical protein APH_0043 [Anaplasma phagocytophilum HZ] gi|88597785|gb|ABD43255.1| conserved hypothetical protein [Anaplasma phagocytophilum HZ] Length = 908 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 56/375 (14%), Positives = 124/375 (33%), Gaps = 24/375 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWT-DFREDFERQAT---LIVGKKIAVKGGIKIHIL 59 + L L + L VP IDW + + Q G I V G I+ L Sbjct: 2 KFLGYLCGAAIIALAAIIGVPYLIDWDARYGDYAFEQLGVAVKNSGVSIKVLGDIRGKFL 61 Query: 60 PFPSVFFKDIRID---QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 P P + +++ + + + S ++ L + LL GE +V + + Sbjct: 62 P-PKLIVRNLYLGCDEESKGCSGVIAVDRLEIGLSVWFLLRGERKVEYIDLYG----LRT 116 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 +K + + ++ + I + + V G + + ++ Sbjct: 117 DAKSLGDVVTTQAGAGVGKVRIFDSVIVPGQTFE---PSPRNAVHVKQSEIRSRGNLYRT 173 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 + I K S++A+ + + ++T+ + + + + + +++F Sbjct: 174 NTEFRIGRGKYSLVAKVELQDSGDKTATVELTSGNTRVSLSGKGRYDVGAGDRTL-LEVF 232 Query: 236 GNLFWNEKQPIYS-GVFSVAGDFSKLLNLEL---SAKKSRLSGNFKISDGN-VRISRYKL 290 G W + G FS A ++ S ++ L FK G+ ++R + Sbjct: 233 GGFEWLLDAKTSNLGEFSQALSVVTRIDALEHIHSTEELSLLAEFKHDVGHGFEVNRLDI 292 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350 + + +S D + +F + A HD + D + + Sbjct: 293 EGSSLTGNVKGKCNASMSCDAQLAFSFMDIDALVRHD--DPDVNIYNTPVRGSSSISFPV 350 Query: 351 IQYSVNKKEEKDNSH 365 I ++ + E D Sbjct: 351 IVLGMDAQAELDIKE 365 >gi|94969941|ref|YP_591989.1| hypothetical protein Acid345_2914 [Candidatus Koribacter versatilis Ellin345] gi|94551991|gb|ABF41915.1| hypothetical protein Acid345_2914 [Candidatus Koribacter versatilis Ellin345] Length = 544 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 33/300 (11%), Positives = 97/300 (32%), Gaps = 15/300 (5%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70 ++++ G FTV ++D + ++A+ I + +LP V + Sbjct: 43 VAAALIVGGVFTVNFYLDRE-VQTLARDMLAEHFHSEVALD-TIHVRLLPTARVSGSGLV 100 Query: 71 IDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128 + Q G+ + S A +LS ++ + ++ + +G ++ Sbjct: 101 LSQTYGGAKIPFISAQKFSANASLWGMLSHTRQLHHVRVEGLIITVARHPQGEKQPTAKR 160 Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188 + + ++++ G ++ I+ + + + D++ + + + +++ + Sbjct: 161 KVPE----LDIDEVEADGAKLVILANKPGKRSLVYDMHHLVLTQVGKSNVMHYLANLRNA 216 Query: 189 VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248 + G + + A + + + G L Sbjct: 217 LPP-GEIEAEGSFGPWNF---DDAGGTHLDGNYVFKKADLGVFKQISGTLSSTGSFTGEL 272 Query: 249 GVFSVAGDFS-KLLNLELSAKKSRLSGNFK--ISDGNVRISRYKLQSILPNSSTDEDNKT 305 G V G ++ + L +F + N + +++ L NS+ + Sbjct: 273 GRIDVKGSTETPDFAVKSGSHPVNLHTDFDATVDGTNGDTQLHSVRAKLLNSTFVVNGTI 332 >gi|89889555|ref|ZP_01201066.1| outer membrane protein [Flavobacteria bacterium BBFL7] gi|89517828|gb|EAS20484.1| outer membrane protein [Flavobacteria bacterium BBFL7] Length = 904 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 43/389 (11%), Positives = 104/389 (26%), Gaps = 47/389 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI--- 58 +++ LG V+V P + + + ++ + + + Sbjct: 1 MKKFFKILGVFLLAVVVLLVAAPFLF-KDQIATIIKNKLNGALDAQVEFA-EVDLSLFRA 58 Query: 59 LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLL---SGEIRVFDMYIDQPHLN 113 P + ++ I K G + + + L S I + ++ I+ Sbjct: 59 FPDARLQIDELSIINKAPFEGDTLFYGKEVKLDLPVGDLFNDASDPIHINELVINDAISR 118 Query: 114 FYLSSKGVSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 ++ G ++W + + L + D + L Sbjct: 119 LKVNEDGKASWDIAKVDSTAVVVEEPQDTTAGFSFDLNHYEINNSDFSYEDIATKNKLRL 178 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVI-AEGTGNFDNKRSAFKITANFPAKNKAISLKI 221 +L + F S L ++ + ++ N+ +L+ Sbjct: 179 MNLTHSGNGDFSLDSSTLDTETSAQVFYGLDDVEYLSGQQVELDADILMDLANQKYTLQ- 237 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS------AKKSRLSGN 275 + L + ++L G + E + F K + +G+ Sbjct: 238 ENEALINDLKLNLDGYVQMVEDGTMVDLAFKTPSSDFKNFFAVIPEVYRKNLDGITTTGD 297 Query: 276 FKISD------GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL- 328 F ++ +V I + + N+S + L S + + Sbjct: 298 FTVNGVINGMVDDVHIPKLDINISSNNASF-----------KYPDLPQSVTKIDIDTQIK 346 Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNK 357 N T E+ + N + N Sbjct: 347 NTTGLAEDTYVRIGNVAFNIGQDRLKGNA 375 >gi|54296920|ref|YP_123289.1| hypothetical protein lpp0961 [Legionella pneumophila str. Paris] gi|53750705|emb|CAH12112.1| hypothetical protein lpp0961 [Legionella pneumophila str. Paris] Length = 513 Score = 73.8 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 52/403 (12%), Positives = 114/403 (28%), Gaps = 33/403 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +L ++L+ L V + + + I ++ + T I K+ + G I + P Sbjct: 3 LLGKILLAFTALMIFVSITLWILAKNIKPETIKQLVSNKITAITHKQSQIDGTISWQLFP 62 Query: 61 FPSVFFKDIRIDQKE-DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + F I I + + ++ I+ L + + PLL G ++ ID L + Sbjct: 63 RPGLKFNKIHIGNENLNDNYSLLIDTLLLNLKITPLLKGHFVFSEINIDGLKLFINQENN 122 Query: 120 GVS-----NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV---YFLSDLNLQISA 171 N Q +T ++K+ + G+I + + V + + Sbjct: 123 EKPLSSEKNANQYNTTTYPNEQFAIQKLLLSHGQIILNSKGHSTVLKNIQIGAEQFNLKN 182 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 ++ + A+ NF R + + + I+ I+ Sbjct: 183 SPFSVQIKAKLTDAAFLQTAKANINFKG-RVSLSPSIIDELNSGISKSSIEGQLQIQNIL 241 Query: 232 IDLFGNLFWNEKQPIY--SGVFSVAGDFSKLLNLELSAKKSRLSGNF-------KISDGN 282 ++ F N + F+ + + Sbjct: 242 LNQFAIKKINTTLKTHKRDIQFNPLTLSLYNGESIGDMDYVIATQQLLINQTATNLDGKQ 301 Query: 283 VRISRYKLQSILPNSSTDEDN--------------KTKVSQDEENLLNFSENGAESMHDL 328 + S K +I N K ++ + + N + + + + Sbjct: 302 LITSLLKHPAISGNLDYSIHASIPLKALSIESLVSKGTITLKDGEVYNINLDQLLNNLKV 361 Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371 E K D Q + K + + Q Sbjct: 362 KLNSLMTETPDNIKKLAQSADWDQNKNTQGNTKFKLANFKFQL 404 >gi|163786481|ref|ZP_02180929.1| putative outer membrane protein [Flavobacteriales bacterium ALC-1] gi|159878341|gb|EDP72397.1| putative outer membrane protein [Flavobacteriales bacterium ALC-1] Length = 886 Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 38/391 (9%), Positives = 113/391 (28%), Gaps = 38/391 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI--- 58 ++++ +G + + + +P F+ + + A + ++ I + + Sbjct: 1 MKKIFKIIGIVLLIFIAILIAIP-FVLESKIDAIVQNYADENLDADLSFD-DISLSLISS 58 Query: 59 LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSG---EIRVFDMYIDQPHLN 113 P V ++++I + + + +S L + + ++ D+ L Sbjct: 59 FPKAEVNVENLKITNRAPFKDETLATAKSISFEMPLGELFKSSEEPLVINEIIADEMLLT 118 Query: 114 FYLSSKGVSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 + G +N+ + + +E + ID+ ++ + Sbjct: 119 LVTNKNGTTNYDIVKKDENTDTVSGSNKEASGFSFDIENYELNNSAFTYIDEGTNTKLYA 178 Query: 163 SDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221 +++N F S L + S+ + T N + + + + K Sbjct: 179 TEINHNGKGIFSGEQSELDTKTEARISMSIDSTEYLSNNIIKLDALIDLDLEEEKYTFK- 237 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281 + + ++ G + EK F K + ++ Sbjct: 238 ENKGFINALPLEFQGFVQMVEKGQQIDISFKNPESSFKDFLAVIPKAYAK---------- 287 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341 I + K VS L+ + ++ + + N Sbjct: 288 --NIENVNTTGNFTVNGII---KGLVSDKTIPNLDINMRSDKASFKYPDLPKSVDNIIIN 342 Query: 342 KNDDLKKDDIQYSVNKKEEKDNSHDKENQEN 372 + ++ + + D D++ ++ Sbjct: 343 ASVKNTTGNVDDTYIDLNQLDFKIDQDVFKS 373 >gi|264680880|ref|YP_003280790.1| hypothetical protein CtCNB1_4748 [Comamonas testosteroni CNB-2] gi|262211396|gb|ACY35494.1| conserved hypothetical protein [Comamonas testosteroni CNB-2] Length = 1332 Score = 73.4 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 90/291 (30%), Gaps = 27/291 (9%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89 +R + E A+ +G +++ P+ D+ + + S + + + Sbjct: 11 EQWRPELESLASRSLGVPVSIGRLNAYRSGLVPTFELGDVVLHDPANKSEALLLPKVVVA 70 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------QRKSTMDMIHNVILEKIH 143 L++ + V +Y++ P L + G D +I Sbjct: 71 VSAHSLMT--LGVEQIYLEGPDLTVRRDADGQIFVAGIAVSSDPGQGTDSDWIFSQPEIA 128 Query: 144 VKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS-VIAEGTGNFD--- 198 ++ G+++ +D+ + L D++L + + + L +G GNF Sbjct: 129 IRSGKLQWVDELRNAAPLQLQDVDLVLRNKRWHHSLRLDATPPEGWGQRFTVMGNFKEPL 188 Query: 199 -----NKRSAFKITANFPAKNKAIS-LKIQLFPLAYPIIIDLFGNLFWNEKQPIYS---- 248 + + A + +S L L P + + G++ Sbjct: 189 LSVHEGRLERWSGQAYLDFTHIDLSHLGQYLGPQDWKLQ-QGKGSVRAWLDVDHGQPVGG 247 Query: 249 -GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 +V + + L G + + N ++ +Q + + Sbjct: 248 VADVAVQALQLQWRDRPEPLALQALRGRLRAKNQNGY--QFSVQGLQFTAD 296 >gi|218439935|ref|YP_002378264.1| hypothetical protein PCC7424_2994 [Cyanothece sp. PCC 7424] gi|218172663|gb|ACK71396.1| protein of unknown function DUF490 [Cyanothece sp. PCC 7424] Length = 1813 Score = 73.4 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 46/382 (12%), Positives = 107/382 (28%), Gaps = 33/382 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR +GLG + + + G F+ E++ T + + + + I + Sbjct: 40 RRFWLGLGTVSFLSISGGLVYGWFLIDRHLAPILEQELTNFLNRPVKIGSVEGISL---T 96 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 V F I D + +E + + + LL+ D+ +P + G Sbjct: 97 GVRFGKSEILPTSDDPAKIALEQVDVTFNPIKLLTHSQLALDVKAIRPDIYVQQGVNGAW 156 Query: 123 NWFQRKSTMDMIHN---VILEKIHVKGGRIKIIDQESDQVYF--------LSDLNLQISA 171 + + LE + + +I + + +++L+ Sbjct: 157 LITPFDGVKSTGNEKVTIELETLRFIDADVIVIARSATNQLQSPVNLFFPVANLDFSDQG 216 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK-----ITANFPAKNKAISLKIQLFPL 226 R ++ + + G V G G + + I A + + + Sbjct: 217 RIIDFEGEGKL-AKGGQVKLSGVGKTNTQEINLSVVGEQIKATDVKDLLPLPFNLNEGEI 275 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 + + L ++ P +G+ ++ +L ++ G + + V + Sbjct: 276 GANLTVKLR-----PKQSPSIAGIATLNNV--TAQIPQLPQSFTQSKGILRFNQTRVNLE 328 Query: 287 RYKLQSILP----NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342 Q N D + E + + K Sbjct: 329 GVTTQFGQLAGVANGKIDLAGGYDLQAKTEP-FLVQNALKTLNIPAPTVPITAQLQSDIK 387 Query: 343 ND-DLKKDDIQYSVNKKEEKDN 363 L K + +VN + Sbjct: 388 VRGSLAKPQVSLTVNSTQAAKI 409 >gi|300113171|ref|YP_003759746.1| hypothetical protein Nwat_0460 [Nitrosococcus watsonii C-113] gi|299539108|gb|ADJ27425.1| conserved hypothetical protein [Nitrosococcus watsonii C-113] Length = 1289 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 80/317 (25%), Gaps = 33/317 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60 R + LG L +++ + D R + +G+++ V I + Sbjct: 9 RYFYLSLGILVCCIVLAFGALWALWTVVEDEPATISRWLSTALGREVHVS-EIGLSWRGG 67 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLSSK 119 P + +RI + + + + A + E + + I L Sbjct: 68 EPRLHLTGVRIIDPQTERPLLNVREIYLDAAPSRTSVEEEWILRHLTIIGGELTVERKPA 127 Query: 120 G--------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV---YFLSDLNLQ 168 G + L ++ + I+ +D ++ + +L L+ Sbjct: 128 GCIRVYGLQDLESPCPHPPRLPAWVLNLTQLTLVDMAIRWLDPVLERKPLELQVRELQLR 187 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 + ++ GS F P + LK + LA Sbjct: 188 NEEDRHWVEGRATLAEKFGS-EIVVKAKFTG------GGIRDPKSQGILYLKGEGLQLAS 240 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 D L++ + A ++ F + + + Sbjct: 241 WQAFDFLAGLYFTHGKGDLELGLR-----------WEKAVLHQVLAKFDWENLKITGNTQ 289 Query: 289 KLQSILPNSSTDEDNKT 305 + S Sbjct: 290 TTEVPSLISFQRLAGTA 306 >gi|197123965|ref|YP_002135916.1| hypothetical protein AnaeK_3574 [Anaeromyxobacter sp. K] gi|196173814|gb|ACG74787.1| protein of unknown function DUF748 [Anaeromyxobacter sp. K] Length = 957 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 36/324 (11%), Positives = 99/324 (30%), Gaps = 36/324 (11%) Query: 16 VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQK 74 +L + + R +QA+ + + + + ++ I P SV + +R+ Sbjct: 24 LLCTYTALGFLAAPSLVRRVAVKQASAALRRPVEID---RVRINPLALSVTVEGLRVKHG 80 Query: 75 EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR------- 127 + + + L +R L LL+G++ ++ + +P + L ++G + Sbjct: 81 DGA-PFAAWDSLYVRLAPLRLLAGDVGFAEIRLVRPAFHVGLDARGALTFEDLLAGEPDA 139 Query: 128 -------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY--FLSDLNLQISARFLNIIS 178 + + + ++ V+ R+ D + L L +++ + Sbjct: 140 PKAGAPAAPAKEGGLGLSIGRLAVEEARVVFRDATRKPAFETTLGPLTVRLESFRTRGGG 199 Query: 179 PLSIDSIKG-----SVIAEGTGNFDNKRSAFKITANFPAKNKAISL---KIQLFPLAYPI 230 + GT RS+ + K + + + Sbjct: 200 DSPYSFTGTTESGETFRWTGTVRSAPLRSSGTLAFERIQLPKYAPYIHDQAPVDLAEGVL 259 Query: 231 IIDLFGNLFWNEKQPIYS---GVFSVAGDFSK---LLNLELSAKKSRLSG-NFKISDGNV 283 + L W + G SV + + + ++G Sbjct: 260 DFETAYELAWGADARVLRTSGGKLSVERLALAPRGEADAPVRLPRVEVAGIQVDALAKQA 319 Query: 284 RISRYKLQSILPNSSTDEDNKTKV 307 ++ ++ + ++D K ++ Sbjct: 320 SVATVAVRGGAVRARLEQDGKLEL 343 >gi|299531874|ref|ZP_07045274.1| hypothetical protein CTS44_13813 [Comamonas testosteroni S44] gi|298720049|gb|EFI61006.1| hypothetical protein CTS44_13813 [Comamonas testosteroni S44] Length = 1353 Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 89/291 (30%), Gaps = 27/291 (9%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89 +R + E A+ +G +++ P+ D+ + + S + + + Sbjct: 32 EQWRPELESLASRSLGVPVSIGRLNAYRSGLVPTFELGDVVLHDPANKSEALLLPKVVVA 91 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------QRKSTMDMIHNVILEKIH 143 L++ + V +Y++ P L + G D +I Sbjct: 92 VSAHSLMT--LGVEQIYLEGPDLTVRRDADGQIFVAGIAVSSDPGQGTDSDWIFSQPEIA 149 Query: 144 VKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS-VIAEGTGNFD--- 198 ++ G+++ +D+ + L D++L + + + L +G GNF Sbjct: 150 IRSGKLQWVDELRNAAPLQLQDVDLVLRNKRWHHSLRLDATPPEGWGQRFTVMGNFKEPL 209 Query: 199 -----NKRSAFKITANFPAKNKAIS-LKIQLFPLAYPIIIDLFGNLFWNEKQPIYS---- 248 + + A + +S L L P + + G++ Sbjct: 210 LSVHEGRLERWSGQAYLDFTHIDLSHLGQYLGPQDWKLQ-QGKGSVRAWLDVDHGQPVGG 268 Query: 249 -GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 +V + L G + + N ++ +Q + + Sbjct: 269 VADVAVQALQLQWRGRPEPLALQALRGRLRAKNQNGY--QFSVQGLQFTAD 317 >gi|260427435|ref|ZP_05781414.1| conserved hypothetical protein [Citreicella sp. SE45] gi|260421927|gb|EEX15178.1| conserved hypothetical protein [Citreicella sp. SE45] Length = 1086 Score = 73.0 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 86/316 (27%), Gaps = 20/316 (6%) Query: 5 VLIGLGFLFSVVLVGAFTVP--LFIDWTDFREDFERQATLIV-GKKIAVKGGIKIHILPF 61 V L L +V + R E + V G G +++ + Sbjct: 15 VFAVLSVLALLVGASVLALIGRPLSAPDWLRARIEARLNEAVPGLDFRF-GDVRLLVQSD 73 Query: 62 --PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + D+ I + G+ + + L PLL GE+ + + L+ Sbjct: 74 ALARIVLTDVDIR-TDSGAPVATLADLEAGLAPAPLLRGEVALRAARLSGAMLSLRRDED 132 Query: 120 GV------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 G + D + V R+ + + S + + + + + Sbjct: 133 GRLGLALGDVFASGTRMPDFPTIIAQVDAAVADPRLAGLQELSAEALTIRYEDARAGRGW 192 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNK---RSAFKITANFPAKNKAISLKIQLFPLAYPI 230 LS+ G + G + + + I A + S + L L Sbjct: 193 TADGGRLSLTREDGRLRLAGDVSLLGRGDVAATLAINAESVIGETSGSFGLNLSGLDSQD 252 Query: 231 IIDLFGNLFWNEKQPI-YSGVFSVAGD---FSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 I L W E SG LN L + L N + ++ Sbjct: 253 IASQSPALAWLEALRAPISGALRGTATEDGQLGALNATLQIGEGVLQPNARTRPIPFQLG 312 Query: 287 RYKLQSILPNSSTDED 302 R ++ D Sbjct: 313 RTYFSYDPATTTLTFD 328 >gi|119898052|ref|YP_933265.1| hypothetical protein azo1761 [Azoarcus sp. BH72] gi|119670465|emb|CAL94378.1| hypothetical protein azo1761 [Azoarcus sp. BH72] Length = 1201 Score = 73.0 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 35/353 (9%), Positives = 91/353 (25%), Gaps = 54/353 (15%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR+ + + +L + + G ++ + + I PF Sbjct: 7 RRIAVWTAAVAVSLLALYAAAGFLLLPWLVSRKLPELVSQRFGLQLTLD---ALRINPFL 63 Query: 63 -SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 ++ + Q DG+ + ++ + + + D + G Sbjct: 64 LTLEAGPATLTQ-SDGNPLLVAQSARFDLDWAGVPYRHWTLDQVSFDGVKVQLVRDQDGR 122 Query: 122 S-----------------------------NWFQRKSTMDMIHNVILEKIHVKGGRIKII 152 + +V++ + ++ + +I Sbjct: 123 WLLPRAPAPAAAAEAAPARQDAAGTIGATAPDAAPPPPETPVADVLIRHLALRNATLTLI 182 Query: 153 DQES-DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP 211 D+ S D ++ L+ +I + + + ++ +G + + + ++ Sbjct: 183 DRASPDAALAVAGLDAEIDGLATAPSARPASYRLGATLPGDGRIAAEGEFALAGRHSSGT 242 Query: 212 AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR 271 + A SL L + G + Y + + L L A Sbjct: 243 LRLDAASLAPWWPLLQRDWRLAAPG-GRIDSASARYWVALAGDQPEVTVEQLALQASALT 301 Query: 272 L------------------SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 L G ++ + + +L S D D Sbjct: 302 LQPENAREPLLALDTLSIAEGRLDLAGRQLVLRGLRLAGGSVGVSADADGTLD 354 Score = 41.4 bits (95), Expect = 0.25, Method: Composition-based stats. Identities = 10/138 (7%), Positives = 46/138 (33%), Gaps = 7/138 (5%) Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 ++ + + + ++ LS+ L L ++ + + + + + G Sbjct: 292 QLALQASALTLQPENAREPLLALDTLSIAEGRLDLAGRQLVLRGLRLAGGSVGVSADADG 351 Query: 121 VSNWFQRKSTM------DMIHNVILEKIHVKGGRIKIID-QESDQVYFLSDLNLQISARF 173 +W + + + + L + + ++ + + + + ++ + Sbjct: 352 TLDWARLRRQPAASATEEAPWQIELPQAELSALAVRYRELAGAGRRIESARVDARADLVL 411 Query: 174 LNIISPLSIDSIKGSVIA 191 +I ++ G++ A Sbjct: 412 GGSEGGAAIHALHGTLAA 429 >gi|302879253|ref|YP_003847817.1| hypothetical protein Galf_2047 [Gallionella capsiferriformans ES-2] gi|302582042|gb|ADL56053.1| hypothetical protein Galf_2047 [Gallionella capsiferriformans ES-2] Length = 1287 Score = 73.0 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 42/334 (12%), Positives = 102/334 (30%), Gaps = 31/334 (9%) Query: 12 LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIR 70 ++++ + +P D F + + +G ++++ I+ + P + ++R Sbjct: 33 ALIIIVLRYWLLP---DIEQFHDKITASLSTAMGNPVSIE-KIQGNWDGLHPHLSLSNVR 88 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV------SNW 124 I K+ + + +L LL+ E+R+ + I++P L G + Sbjct: 89 ILDKQG-QPALVLPQIETSLSWLSLLAAELRLTRLEIERPTLLIRRDVSGKLYIGSVAVS 147 Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLNLQISARFLNIISPLSID 183 + + +I V+ I +D++ + L+ +NL I F + L Sbjct: 148 SENNDDDLANWLLHQSRIVVRDAIIVWLDEQRNAPPLVLNRVNLHIENLFSHHQFALRAS 207 Query: 184 -SIKGSVIAEGTGNFDNKRSA---------------FKITANFPAKNKAISLKIQLFPLA 227 + + + + G+F KR + A P L + Sbjct: 208 PATELATPLDIRGDFHGKRYGEWKKWRGQVFGQLDYTDMLAWRPWLKLPEELSRGRGAVR 267 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRI 285 + D + + + + L A L ++I+ + + Sbjct: 268 AWLSFDKGALTQLTADLIMQDITTRLTDNTPPMNIHFLRGRASWKALENGWEIATDKLSL 327 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319 + P + L + Sbjct: 328 RLLSGVQLQPTDFYFRTQAASKALASRGELRANL 361 >gi|260221926|emb|CBA30978.1| hypothetical protein Csp_C26250 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 1351 Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 93/314 (29%), Gaps = 18/314 (5%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI 58 + + L L + V + + I DFR E QAT +G ++ + G ++ Sbjct: 18 LAKWALRVLAMAWLAVGLLWCGLHFVIVPRIADFRPWVETQATQALGLQVRI-GELQARS 76 Query: 59 LPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 PS+ + + +E + +S +L + +++D P L+ + Sbjct: 77 NGVIPSIELLRVTVFDREGREALL-LPSVSAALSPRSIL--GLGFEQLHVDSPQLDIRRT 133 Query: 118 SKGVSNW-------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQI 169 G + ++ + G + D+ S + +NL + Sbjct: 134 LDGKWWIAGLEMATAPTQDGAGADWLFSQAEVALVNGSVTWTDETRSVEPVTFQRVNLVV 193 Query: 170 SARFLNIISPLSIDSIKGS-VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 R L D + G F + +A + ++ Sbjct: 194 RNRLRTHSMRLDADPPEHWGARLSVQGVFRQPLLSRHAGQWTDWDGQAYADFSRVDLAEL 253 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 +DL + ++ V ++S + L+ + + Sbjct: 254 GRYVDL--GVQLARGSGVFRAWVDVVRGTPTGAVADVSLSQVNLTTGPSLEPLALASVSG 311 Query: 289 KLQSILPNSSTDED 302 +L + + ++ Sbjct: 312 RLGAKALDGGSEFS 325 >gi|255037758|ref|YP_003088379.1| hypothetical protein Dfer_4010 [Dyadobacter fermentans DSM 18053] gi|254950514|gb|ACT95214.1| hypothetical protein Dfer_4010 [Dyadobacter fermentans DSM 18053] Length = 832 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 88/287 (30%), Gaps = 22/287 (7%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFR--EDFERQATLIVGKKIAVKGGIKIHI 58 M ++VL +G + V V L+I + + + + + + G K Sbjct: 1 MFQKVLKVIGIVALVCFFLFGAVELWIYKNREKLFRNAQELINENLNGNLEI-GDFKFRP 59 Query: 59 L---PFPSVFFKDIRIDQ---KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112 + D+++ K E + + + + +G+IR+ ++ ++ L Sbjct: 60 FYGALGLNFTLYDVKLTDTLYNVHHHPFLKAEKIHVALDLKHVFTGDIRIKNLVLEDGGL 119 Query: 113 NFYLSSKGVSNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY--F 161 + G SN K + L + + D + + Sbjct: 120 RLFTQKDGYSNLSIFKSGKEKKDSKKGDNDGMVKKLGNVRFANFAVAYSDSVKRKYFGAI 179 Query: 162 LSDLNLQISARFLNIISPL--SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 D I + + L S+ + A+ G + + + + K + + Sbjct: 180 FRDATNIIERTDSSTNATLTGSVYFDGLTFNADKGGFLMKQETTLALVLGYDEDEKQLKI 239 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS 266 + A I + G +++ ++ F G K L+ Sbjct: 240 YPSILESATHDKIGINGVFDFSDTIKVFHLNFEAKGIAVKDALPLLN 286 >gi|221069808|ref|ZP_03545913.1| conserved hypothetical protein [Comamonas testosteroni KF-1] gi|220714831|gb|EED70199.1| conserved hypothetical protein [Comamonas testosteroni KF-1] Length = 1370 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 91/291 (31%), Gaps = 27/291 (9%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89 +R + E A+ +G +++ P+ D+ + + S + + + Sbjct: 49 EQWRPELESLASRSLGVPVSIGRLHAYRSGLVPTFELGDVVLHDPANKSEALLLPKVVVA 108 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------QRKSTMDMIHNVILEKIH 143 L++ + V +Y++ P L + G D +I Sbjct: 109 VSAHSLMT--LGVEQIYLEGPDLTVRRDTDGQIFVAGIAVSSDPGQGGDSDWIFSQPEIA 166 Query: 144 VKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS-VIAEGTGNFD--- 198 ++GG+++ +D+ + L D++L + + + L +G GNF Sbjct: 167 IRGGKLQWVDELRNAAPLQLQDVDLVLRNKRWHHSLRLDATPPQGWGQRFTVMGNFKEPL 226 Query: 199 -----NKRSAFKITANFPAKNKAIS-LKIQLFPLAYPIIIDLFGNLFWNEKQPIYS---- 248 + + A + +S L L P + + G++ Sbjct: 227 LSVHEGRLERWSGQAYLDFAHIDLSHLGQYLGPQDWKLQ-QGKGSVRAWLDVEHGQPVGA 285 Query: 249 -GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 +V + + L G + + N ++ +Q + + Sbjct: 286 VADVAVQALQLQWRDRPEPLALQALRGRLRAKNQNGY--QFSVQGLQFTAD 334 >gi|254475502|ref|ZP_05088888.1| hypothetical protein RR11_1339 [Ruegeria sp. R11] gi|214029745|gb|EEB70580.1| hypothetical protein RR11_1339 [Ruegeria sp. R11] Length = 1188 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 106/360 (29%), Gaps = 38/360 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTV---PLFIDWTDFREDFERQATLIVG-KKIAVKG-GIKIHI 58 R + + F+++ + F RE ER+ +G I G + ++ Sbjct: 79 RGVTVVAVGFALLFGSFVYLGMDTRFNAPDWLRERVERRIEQHLGGLTIEFGGIHLVVNR 138 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 P V +D+ + + +++ PLL G++R + + + Sbjct: 139 GWRPRVSLRDVTLRDENGAR-VARLADAQASLAMRPLLRGQVRPKSISLSGLFGTLRRGA 197 Query: 119 KGVSNWFQRKSTMDMIHNVILEKI-------------------HVKGGRIKIIDQESDQV 159 G + + L + + ++ D +V Sbjct: 198 DGSLQLSLAEGEAPLRQAANLADLIEQWESQLELPVLSALISVETEALTLRYEDDRLGRV 257 Query: 160 YFLSDLNLQISA-----RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214 + L ++++S + S LS GSV A +K + F I + A Sbjct: 258 WTLDGGSVRMSRVGQDIDLAGVFSILSGRGYVGSVEANYASAIGSKAAEFGILIDSVASE 317 Query: 215 KAISLKIQ---LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR 271 + L PL PI L G + + S + + + Sbjct: 318 DIAAQSAALGWLEPLRAPISGSLRGGVAADGGLLPLSASLQIGEGVIQPTPTARPVPING 377 Query: 272 LSGNFKI--SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 F ++ + + + S + + ++ E+ L G DLN Sbjct: 378 AQSYFTYLPDVQELQFNELSVNTG--WGSGAMEGRARLMGVEDGQLT-DLVGQLRFQDLN 434 >gi|167763665|ref|ZP_02435792.1| hypothetical protein BACSTE_02043 [Bacteroides stercoris ATCC 43183] gi|167698959|gb|EDS15538.1| hypothetical protein BACSTE_02043 [Bacteroides stercoris ATCC 43183] Length = 985 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 36/276 (13%), Positives = 85/276 (30%), Gaps = 25/276 (9%) Query: 1 MLRRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59 +L+ I LG L +V ++ A + A + K+ +K +++ Sbjct: 8 ILKLSGIILGALTAVAGILIAVVLNFIFTSEKLTPIVLEAANRNLNAKLDMK-SVELTFF 66 Query: 60 ---PFPSVFFKDIRIDQKE-------DGSFESKIEGLSMRAEFLPLLSGE-IRVFDMYID 108 P V D + K + + L + I + + ++ Sbjct: 67 STFPRFGVQLTDGTLVSKAIRDTLWQRTDTLISFKKAVAVVNPMDYLRQQKISIHRLALE 126 Query: 109 QPHLNFYLSSKGVSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESD 157 + Y + G++NW I + + +I ++ + + D+++ Sbjct: 127 HADIYAYKNKDGIANWDITVPDTVQSVSSPAGDAMNIDELDIRQISIQHATVTMDDRDTR 186 Query: 158 QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217 L D +L + A S L++D +++ G R A + + Sbjct: 187 IFANLWDTDLTLKANMKKGHSMLAVDFRNKNLLFWQDGQLLANRIATHLRTDLELNTARH 246 Query: 218 SLKIQLFPLA-YPIIIDLFGNLFWNEKQPIYSGVFS 252 SL + + + + G + + Sbjct: 247 SLLLHDAMIDINGTKLGVKGTVRRDTAAKALDVDLQ 282 >gi|110833395|ref|YP_692254.1| hypothetical protein ABO_0534 [Alcanivorax borkumensis SK2] gi|110646506|emb|CAL15982.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 1273 Score = 72.6 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 36/340 (10%), Positives = 86/340 (25%), Gaps = 25/340 (7%) Query: 6 LIGLGFLFSVVLVGAFTVP--LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 L +++ V L + D+RE E+ + + + P Sbjct: 16 LWWTVATVLLLMAAYVVVGRQLMLLVPDYRERLEQIFEKRIQTPLTIAELNGTMSGLVPQ 75 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS- 122 + IR+ E + E + L ++ + ++ + L+ G Sbjct: 76 FVARQIRLPAPEGEAPLVLGEVVLSIDVLRSLWHRDLVLEELSVRGVDLSLVRGDDGKIR 135 Query: 123 ----NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE------SDQVYFLSDLNLQISAR 172 + + + + K+ + + I D S+L+ ++ Sbjct: 136 LRGLDVLGQSDPDNRPPLERILKLFYRQQLLSISDARLSLEWPGMPPLAASELDATMTND 195 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK-ITANFPAKNKAISLKIQL-FPLAYPI 230 + +++ + + + A+ + + L L A P+ Sbjct: 196 GDEHRLAVRVEARDRPLSLLAKIHLHEDAYTLDQVDADIFTRFEGKRLNEWLPQIDAMPL 255 Query: 231 II-DLFGNLFWNEKQP-----IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + L ++ V + L L + D Sbjct: 256 ELGSLDASVALWGTLQGGEPTSGQLQVDVPALTLFQADTVLPLSGLSLRASLLREDQKAT 315 Query: 285 ISRYKLQSILPNSSTDEDNKTKV---SQDEENLLNFSENG 321 +S L P + +Q E N Sbjct: 316 LSLSNLTGNSPTGPLTL-GDMALRWETQGERREWQLRANA 354 >gi|296134970|ref|YP_003642212.1| protein of unknown function DUF748 [Thiomonas intermedia K12] gi|295795092|gb|ADG29882.1| protein of unknown function DUF748 [Thiomonas intermedia K12] Length = 1313 Score = 72.6 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 100/357 (28%), Gaps = 48/357 (13%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPS 63 VLI G V G V + R A + + V K+ P Sbjct: 21 VLIVAGLFVFYVAFGYLAVGPLAE-----HYIPRLAQSQLDSRATVG---KVAFDPLHLD 72 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 + +++ + + L + + L + IDQP +N ++ G N Sbjct: 73 LTVDQLQLSTPQGA-PLAGFGKLFVDFAPVSLFRWAWTFHQIRIDQPQVNVAIAQGGAMN 131 Query: 124 WFQ----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY--FLSDLNLQISA 171 W D + V++E++ + GG ++ D Y L+ LN+QI+ Sbjct: 132 WDALVRALQRGPKPAKPSDTLPRVVIEQLQIAGGTLRYADANRPHPYATQLTPLNVQIND 191 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 + + T + + + A+ + L + Sbjct: 192 LSTLPKARGQYAISLVLPEQKATLRWKGYVGVNPLVSGGQAELTGLDLAAAARAVP---- 247 Query: 232 IDLFGNLFWNEKQPIYSGVFSV-------------AGDFSKLLNLELSAKKSRLSGNFKI 278 +L L +S G + L + + K+ Sbjct: 248 -NLSSTLQITSGTASIHAAYSAVQGQQGWLWAINDLGAQIQTLAARAGTAAMQ-WQSLKL 305 Query: 279 SDGNVRISR--YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 + ++ +QS+ + + + ++ GA+ F Sbjct: 306 DRAKIDGAKRTVSMQSLSLDGLSAASGRDQLQFHTA-----QLQGAQIDWARQHAGF 357 >gi|148360454|ref|YP_001251661.1| hypothetical protein LPC_2393 [Legionella pneumophila str. Corby] gi|296106481|ref|YP_003618181.1| putative protein involved in outer membrane biogenesis [Legionella pneumophila 2300/99 Alcoy] gi|148282227|gb|ABQ56315.1| conserved hypothetical protein [Legionella pneumophila str. Corby] gi|295648382|gb|ADG24229.1| putative protein involved in outer membrane biogenesis [Legionella pneumophila 2300/99 Alcoy] Length = 513 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 114/403 (28%), Gaps = 33/403 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +L ++L+ L V + + + I ++ + T I K+ + G I + P Sbjct: 3 LLGKILLAFTALMIFVSITLWILAKNIKPETIKQLVSNKITAITHKQSQIDGTISWQLFP 62 Query: 61 FPSVFFKDIRIDQKE-DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + F I I + + ++ I+ L + + PLL G ++ ID L + Sbjct: 63 RPGLKFNKIHIGNENLNDNYSLLIDTLLLNLKITPLLKGHFVFSEINIDGLKLFINQENN 122 Query: 120 GVSNWFQRKSTMDMI-----HNVILEKIHVKGGRIKIIDQESDQVYFLSDL---NLQISA 171 ++K+ ++K+ + G+I + + V + + Sbjct: 123 EKPLSSEKKANQYNTTTYPNEQFAIQKLLLSHGQIILNSKGHSTVLKNIQIGAEQFNLKN 182 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 ++ + A+ NF R + + + I+ I+ Sbjct: 183 SPFSVQIKAKLTDAAFLQTAKANINFKG-RVSLSPSIIDELNSGISKSSIEGQLQIQNIL 241 Query: 232 IDLFGNLFWNEKQPIY--SGVFSVAGDFSKLLNLELSAKKSRLSGNF-------KISDGN 282 ++ F N + F+ + + Sbjct: 242 LNQFAIKKINTTLKTHKRDIQFNPLTLSLYNGESIGDMDYVIATQQLLINQTATNLDGKQ 301 Query: 283 VRISRYKLQSILPNSSTDEDN--------------KTKVSQDEENLLNFSENGAESMHDL 328 + S K +I N K ++ + + N + + + + Sbjct: 302 LITSLLKHPAISGNLDYSIHASIPLKALSIESLVSKGTITLKDGEVYNINLDQLLNNLKV 361 Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371 E K D Q + K + + Q Sbjct: 362 KLNSLMTETPDNIKKLTQSADWDQNKNTQGNTKFKLANFKFQL 404 >gi|319787816|ref|YP_004147291.1| hypothetical protein Psesu_2226 [Pseudoxanthomonas suwonensis 11-1] gi|317466328|gb|ADV28060.1| putative secreted protein [Pseudoxanthomonas suwonensis 11-1] Length = 1344 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 43/328 (13%), Positives = 91/328 (27%), Gaps = 19/328 (5%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66 L +V LV L + + G+ +A ++ P + Sbjct: 35 VAVALIAVALVVGAASQLLPLAERHPDRVAALLSEKAGRPVAFDQ-VRTRWTRRGPLLQL 93 Query: 67 KDIRIDQKEDGSFE-SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 +RI ++ + L ++ + P L G Sbjct: 94 DGLRIGGGPGADGGGVQVGQAEVLVSLYAGLLPGRSFTELRLRGPALTLRREDDGRWAIR 153 Query: 126 QRKSTMDMIHNV------ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 D L ++ V GGR+ I + + ++L++ + + Sbjct: 154 GLPLADDAPQADPLQHLEGLGELQVIGGRLDIDAPQIGLQARIPRIDLRLRVDQSQVRAG 213 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA--ISLKIQLFPLAYPIIIDLFGN 237 +FD R ++ + A + + L + Sbjct: 214 ARGWIDADGQPLSLALDFDRSRGDGRVYVDLDAASLSAWAPLLEPTGITPQGGSGRIQAW 273 Query: 238 LFWNEKQPIYSGV-FSVAGDFSKLLNLELSA----KKSRLSGN--FKISDGNVRISRYKL 290 ++ + + F + G LE + LSG+ +++ G R+ +L Sbjct: 274 AELRGRRVVLATTRFELRGLDLAGAPLEGRGRPRQQLPGLSGHVIWRLVAGGWRLDAPRL 333 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFS 318 Q P SS D ++ E+ Sbjct: 334 QLQSPGSSQTLDGLL-LAAGEQYAFRID 360 >gi|120611653|ref|YP_971331.1| hypothetical protein Aave_2990 [Acidovorax citrulli AAC00-1] gi|120590117|gb|ABM33557.1| protein of unknown function DUF748 [Acidovorax citrulli AAC00-1] Length = 1295 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 37/279 (13%), Positives = 83/279 (29%), Gaps = 28/279 (10%) Query: 15 VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74 V + VP + W ER + G+ + V G + + DI + Sbjct: 43 VWGLAWLAVPPLVRWG-----LERWGSSFAGRAVTV-GKVDFRPW-TLELTVHDIALAAA 95 Query: 75 EDGSFES-KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR------ 127 G+ +I L + E L+ + + ID P L G + Sbjct: 96 APGAPAQAEIRRLYIDMEVQSLVRWAPVLDALEIDAPRLRVVRGQDGRYDIHDLLQRGAA 155 Query: 128 --KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 S L + ++ G ++ D+ + Q + L+ L L I Sbjct: 156 RPGSGGGGGARFALYNLALRDGAVEFADRTTGQTHRLTGLELGIP------FLSNLPADR 209 Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 + +V + D + ++++ ++++ +DL + Sbjct: 210 QVTVTPRLAFSLDGSTFDTGARSTPFSEDRNTQARLRIRG------LDLSPLRAYWPAGT 263 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + L+ + + G+ ++S + Sbjct: 264 PLRPQAGTLEAELDIGFLQGPQPRLTVGGHARLSGVRLD 302 Score = 56.8 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 27/260 (10%), Positives = 63/260 (24%), Gaps = 41/260 (15%) Query: 49 AVKGGIKIHIL--PFPSVF------FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEI 100 ++ + I L P P + +R+D + L + A + L Sbjct: 271 TLEAELDIGFLQGPQPRLTVGGHARLSGVRLDGPPGSGP-VAFQALDIHAASVEPLRKSA 329 Query: 101 RVFDMYIDQPHLNFYLSSKGVSNW-------------------FQRKSTMDMIHNVILEK 141 + + P + ++G +W V +++ Sbjct: 330 HLVSVEWSGPDIAVRRDARGRWDWAAAAGGAGSARGAPAATPPAGGAGPSSGAWQVAIDR 389 Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARF----LNIISPLSIDSI-----KGSVIAE 192 V+ G + D+ + + ++ + A+ P + + G+ A Sbjct: 390 FAVREGHVAWRDESAARTVAMAWDGVHAQAQSLSWPWKGGIPFRLQARMRPAAAGAAQAP 449 Query: 193 GTGNFDNKRSAFKITANFPAKNKAIS----LKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248 T + + +S F I+ + WN Sbjct: 450 ATLRVAGTAWPGRGQVAASLRGLPLSAVEAYAAGAFAPQVGARIEADAGVAWNHANGALV 509 Query: 249 GVFSVAGDFSKLLNLELSAK 268 + L Sbjct: 510 VKVARFAADGVTLACPAGGP 529 Score = 46.8 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 28/217 (12%), Positives = 64/217 (29%), Gaps = 18/217 (8%) Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-------- 133 + E L + ++ + + + V P L ++G + Sbjct: 553 QAERLEIENAWIDVPARTVSVERAVARAPRLRAERDAQGRWMFDAWPRGTAERVPSQEVR 612 Query: 134 ------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187 +V L ++ V+ G + + D L + + AR L + + Sbjct: 613 AAGGEVPWSVRLAEVSVERGAVALRDAVPSSPVDLRWSAIALQARGLRWPQAAAGPAAPV 672 Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 + G +R ++ ++++ +L P+ + L I Sbjct: 673 QLSLSGQWE-AGRREPGRLAYEGRLTMAPLAVQGRLQAQRLPLHL-LEPYAAPWLNVRIV 730 Query: 248 SGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 GD + K+ + GN + + VR Sbjct: 731 RAEAGFEGD--VDYAATAAGAKATVRGNAALDEVRVR 765 >gi|146308614|ref|YP_001189079.1| hypothetical protein Pmen_3599 [Pseudomonas mendocina ymp] gi|145576815|gb|ABP86347.1| protein of unknown function DUF748 [Pseudomonas mendocina ymp] Length = 960 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 38/403 (9%), Positives = 117/403 (29%), Gaps = 37/403 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + L + L + I +Q + +++ ++ + PF Sbjct: 1 MPKGLKRALSALLITLFLYSLIGFLILPGVALRIANQQLAQLATVPASLQ---RLQLNPF 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + +RI E + L E L SG + + + +D + G Sbjct: 58 SLELSLWGLRIGDAE--QEHLGFQRLYANLELDSLWSGALHLAQVELDGARTEVLFAKDG 115 Query: 121 VSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS----DLN 166 N Q + + + ++ +H++ + D + + D+ Sbjct: 116 TLNLTQLFRLPESSAQNEDSDSEPFPLRIDNLHLREKALHFQDLRPSEPVEFAYDSLDVE 175 Query: 167 LQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 L + + +++ + G V +G + S+ + P A Sbjct: 176 LHNLSTLAGDNARMTLTARGPYGGHVDWQGQVSLSPLASSGSLQITDGRLRAFWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL-SGN 275 + L ++ + L + + + + ++ + + + Sbjct: 236 LPLVLKEGEVDLSSDYRLDLSKGTELQLSKIKVQLAPFAIDDPSGKPLVRLQRLDIDNSS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335 ++ V I + + Q + ++ + D + + + E+ ++ Sbjct: 296 LDLAKQQVVIGQVRSQGLEAWAAREADGQLDWQKLFAKPDTAESEAPKPAAPPGESKPWQ 355 Query: 336 EEEKKNKNDDLK------KDDIQYSVNKKEEKDNSHDKENQEN 372 + + D K + +V+ + + ++ + Sbjct: 356 VLLQDVQLRDYKAHLADRVPQQEVAVDVGPLNLDLKNFDSLGD 398 >gi|301059612|ref|ZP_07200521.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300446258|gb|EFK10114.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 1243 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 91/327 (27%), Gaps = 25/327 (7%) Query: 3 RRVLIGLGFLFS----VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58 ++ +G + ++ V PL I+ D E + G + G I + Sbjct: 27 KKFFYWIGGIAGMALLMLFVLLLVAPLLINLDSIHRDIETRFNRETGGQCGF-GKIAVSF 85 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 LP P G + +S+ E LPL GE R P + L+S Sbjct: 86 LPRPHAVIHQGNCSFP--GEKSLTFKSVSVYPELLPLFKGEFRPSHTRFISPRIIIDLNS 143 Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD--LNLQISARFLNI 176 G + + K + G +ID+ + + + L+L I Sbjct: 144 AGSNGQALAPFPITN------GKFEMNQGLRDLIDETDGLMIQVEEGLLDLTIGKNQSFR 197 Query: 177 ISPLSIDSIKGSVIAEGTGN-----FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 + +S+ + + F ++ N A++L + Sbjct: 198 FNNISLSAKHAKGNLILEMDCTSNFFQKLNLKARMELTSYKTNGALTLS---GLKPGQLT 254 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 +L + + G L ++ + + + ++Q Sbjct: 255 GNLQDGNALRLEDGLIDLQTKFEGAGLNSLKAHINLSAPSM--GLSRDQRKITVKGAQIQ 312 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFS 318 + ++ + S Sbjct: 313 GNMQFNNDSLTAALSDMTLAYPPMRLS 339 >gi|163753966|ref|ZP_02161089.1| hypothetical protein KAOT1_20127 [Kordia algicida OT-1] gi|161326180|gb|EDP97506.1| hypothetical protein KAOT1_20127 [Kordia algicida OT-1] Length = 1069 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 113/353 (32%), Gaps = 36/353 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI---L 59 +R+L+GL + +VL G + + E+ G+ + + G ++ + Sbjct: 8 KRILLGLILVPILVLGGLILYIQSNQSDIIKGEIEKLNKEHKGR-VTI-GDSELSLFGNF 65 Query: 60 PFPSVFFKDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 P+ SV D +I + ++ +E + + F ++ G+ + + ++ N + Sbjct: 66 PYISVKVYDFQIFETKEDNAPVIMDVEDIYVGFNFWDIVEGKYDIQSLIVEDGVFNIVIH 125 Query: 118 SKGVSNW----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 +N T N+ L+KI +K I +D+ ++ +++ Sbjct: 126 ENNTTNIQNSLASTSDTETPTTNIHLKKIKLKNLDIHTLDEATNT-------DVEKFIYT 178 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 I G + + N ++ K K + + + I++ Sbjct: 179 GTGGFSQKDSIIAGHIDTDFELNVISEAI-----VPDFMKKKHFEIHTDVEFNQHTGILE 233 Query: 234 LFGN-LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + + + G D LNL + K + +V I + + Sbjct: 234 IQPSGVKMRNADFELKGTIDTKND--VDLNLFIQGTKPNFDMLIAFAPSDV-IPYLEKYN 290 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 + + K ++ + T+ F E + K D Sbjct: 291 NSGDIYFNATIKGPSNKGNRPA---------INAEFGATEAFLENPARRKKID 334 >gi|303256825|ref|ZP_07342839.1| putative ATPase involved in pili biogenesis [Burkholderiales bacterium 1_1_47] gi|302860316|gb|EFL83393.1| putative ATPase involved in pili biogenesis [Burkholderiales bacterium 1_1_47] Length = 977 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 40/403 (9%), Positives = 109/403 (27%), Gaps = 41/403 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + L + + ++ A IVG+ I + ++ PF Sbjct: 1 MGKKLWITTGIIGALAAAYTAGGFLGVPYGVNWALKKYAEPIVGRTITTQ---EVKFNPF 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 K + + QK+ + L + + L V + ID + + Sbjct: 58 TLQFSVKGLNV-QKDGEPALLSVGSLQTKVLWDSLFKLSPLVQYITIDGLNSTVIRTGLD 116 Query: 121 VSNW-------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 N+ + + D + I + I + D+ +V ++DLN Sbjct: 117 TFNFSDIIQRIQEMPTSPEEEKKDDKPLQFSIGNIKLTNSSITLDDKFRHKVDKVTDLNF 176 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 + + + + + + NF+ + A + K + + L Sbjct: 177 ALP------LISNFQNDVDVPITPDLKFNFNGEPFAINAESVPFTPGKKTGVNFTVTGLN 230 Query: 228 YPIIIDLFG---NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG---------- 274 N+ + + + ++ Sbjct: 231 LENAASFNPIPLNVKVTKGTMDCAFNLDFEKKQGEENAYLRLKGTVKMKDVGLEDELGKA 290 Query: 275 --NFKISDGNVRISRYKLQSILPN-SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331 + + + + + + N + V +++ LN + + Sbjct: 291 YQIIGVKEIDANLKEFAFFRQNLDIGEIQIHNPSVVVIRDKDSLNLVQLLTHI-VKEQKA 349 Query: 332 DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374 ++ ++ + L +D+ + + D + NF+ Sbjct: 350 QAKQDAKEAKEKATLPEDEKKTPNDWTWNIDKVSVRNGMINFT 392 Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 51/408 (12%), Positives = 110/408 (26%), Gaps = 75/408 (18%) Query: 18 VGAFTVPLFIDWT---------DFREDFERQATL-IVGKKIAVKGGIKIHILPFPSVFFK 67 G P +D D + ++ + + KG +K+++ S + Sbjct: 437 GGIVITPFSMDLNLQSSGLSIADLTPYISQYSSAHVTQGTFSNKGELKLNLAKDVSFSYS 496 Query: 68 ---DIRIDQKEDGSFESKIEGLSM---RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 D+ D + + ++ L +I + + + P++N ++ G Sbjct: 497 GNADVASLNVTDKQGAAAVSLKNLAVGGISVSGLSPLQISLGTIALTSPNVNVVMNKNGS 556 Query: 122 SNWFQRKSTMDMIHN---------------------------VILEKIHVKGGRIKIIDQ 154 N + + + + KI + GR++ D Sbjct: 557 INLASLGTPSNAPAPAATTDKPAASKPQSKAQASSGSSSAPAINVGKITLTDGRVRYTDN 616 Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214 + + L+ NL S + + KG+ + G + T N Sbjct: 617 SIEPTFKLNASNLAGSLSNYSTTT-------KGNATVDVKGLLNGTPMNISGTINPFESK 669 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLF---WNEKQPIYSGVFSVAGDFSKLLNL-------- 263 +++K ++ L+ P + Y G F + D N Sbjct: 670 LKLAMKGEVTSLSLPAFSPFSAKFTGHPIEKGLLTYKGAFDINQDKLTSENALVINKLEF 729 Query: 264 --ELSAKKSRLSGNFKISDGNVRISRYKLQS---ILPNSSTDEDNKTKVS-QDEENLLNF 317 ++ K L +S R + L + V Sbjct: 730 GSQVPDAKDALPVGLAVSLLQDRQGQIDLNIPVSGSLDDPEFSVGGIIVKVIVNLISKAV 789 Query: 318 SENGAES-------MHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358 + A DLN F + ++ +K +I + Sbjct: 790 TAPFALIGSMFGGEDMDLNNLQFASGSARLDEKT-IKALNIVAKAMQD 836 >gi|78778223|ref|YP_394538.1| hypothetical protein Suden_2029 [Sulfurimonas denitrificans DSM 1251] gi|78498763|gb|ABB45303.1| Protein of unknown function DUF748 [Sulfurimonas denitrificans DSM 1251] Length = 1161 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 117/352 (33%), Gaps = 42/352 (11%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M +++L+ L + +VG VPL ++ + I +K I + P Sbjct: 1 MFKKILLSL--IAFYTVVGFLVVPLLLE-----SQIPKSVAKSTNSNITIK---DISLNP 50 Query: 61 FP-SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + + +E+ + + + L + + LPLL G + V ++ P ++ Sbjct: 51 YLLELKISGVELRDEEN-NHLASFDSLYIDVKLLPLLKGVLHVKEINFKNPQISLLYDKD 109 Query: 120 GVSNWFQRKSTMDMIH---------NVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168 N+ + VI++ + + G I D Q + ++ + Sbjct: 110 RTFNFANLVKESADDNSTAKSKNSLRVIVDSLSLSNGIIAYKDFSKPQKFEFIADAISFK 169 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 ++ S + + AN A N ++ ++ Sbjct: 170 LTDIDTK-----DFSSSGAKFRFNSNLQDGGE---IDLRANILALN-PFAVDGRVDIKDA 220 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 + ++ + + + GVFS G +++A + + ++ ++ Sbjct: 221 KLY-SIWKYIQDVLRVEVADGVFSF-GATYNFNIDDINAT--------HVDNIHLTLNDL 270 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKK 340 +++ N+ +S +++ + + D + +E+ + Sbjct: 271 RVKPKDANNDILTLKSLNISDASMKPMDYKVSVKSVVLDSMKVKVERDEKAE 322 >gi|217967202|ref|YP_002352708.1| hypothetical protein Dtur_0813 [Dictyoglomus turgidum DSM 6724] gi|217336301|gb|ACK42094.1| conserved hypothetical protein [Dictyoglomus turgidum DSM 6724] Length = 479 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 50/377 (13%), Positives = 117/377 (31%), Gaps = 29/377 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++++ G LF V+ + L W + GK + +K I P Sbjct: 1 MKKLIKGFLILFLVIFSIVILLALTSPW-WAKSLVSYILEKNFGKYAKAE-DVKY-IFPN 57 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 V + + S + L + ++ + +P + + KG Sbjct: 58 -KVEISTLEVANFATFSN--------VSISLQNPLK--LSPINIELTKPKMIIIHNEKGE 106 Query: 122 SNWFQRK----STMDMIHNVILE-KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 + Q S + +N+ +E K +K G + + D ++++ + +N + + I Sbjct: 107 WTFPQIPGIDTSKSNNANNISIEIKAKIKDGIVVVRDLKTEKDIEVQKVNGNLYWKNQMI 166 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 +S + + GT +F + + + + + Sbjct: 167 TYSVSTSINNQEIKSYGTYDFSKEEGNLTFEFKNALADVWAGVFLPNIFYIEKGYFTGWI 226 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 N ++ + SG + + + K +S KI N+ I + L + Sbjct: 227 NTKGDKNDWVVSGEINA--FNVEGRIASFTPKFVNVSTKVKIDGENINI--LDGRGNLWD 282 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356 + K + +N S + + +FF+ + + N Sbjct: 283 ADIKFLGKAT----PKPEMNISFES--LNLEKIDKEFFKGSINLRGKAKGEFSISESWEN 336 Query: 357 KKEEKDNSHDKENQENF 373 + +K + NF Sbjct: 337 AIIKGYIIAEKGSIYNF 353 >gi|90408667|ref|ZP_01216818.1| hypothetical protein PCNPT3_07160 [Psychromonas sp. CNPT3] gi|90310213|gb|EAS38347.1| hypothetical protein PCNPT3_07160 [Psychromonas sp. CNPT3] Length = 375 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 43/326 (13%), Positives = 102/326 (31%), Gaps = 35/326 (10%) Query: 13 FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71 ++L+G FI + Q L +G +K I PF + +++ I Sbjct: 38 LFLLLMGYSLSGFFILPRILKNTLIEQVQLNLGWNTTIK---NIAFNPFLLRLDIEELSI 94 Query: 72 DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW------- 124 + K + LS+ E L G D+ + P ++ + KG +N+ Sbjct: 95 ENKL-KRPQLSFTKLSIDFELRSLFEGAFSFADVRLIDPAIHLIIDKKGNNNFQQALINN 153 Query: 125 ------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY--FLSDLNLQISARFLNI 176 + +I ++ + I +K G++ I D ++ + +N + Sbjct: 154 EKSQKSEDENNKKQIIPPLLFDLIQLKNGQLSIDDHRVNKRLSFKILPINFTLHDFSTRK 213 Query: 177 ISPLSID-----SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 + + + S+ +G + S +T K + P Sbjct: 214 DTKGNYKLALSIAPGESIDWQGDISLQPFSSQGFLTLKGIQAAKFWPYIQEFMPYKLQHS 273 Query: 232 -IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG---------NFKISDG 281 IDL + + K + L ++ + + + Sbjct: 274 EIDLKTLYKVKSQDDRLQLQLKNSFITLKNIELADKKQQKTFTKIKQILIGPFRYDLEKQ 333 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKV 307 + I + K+ ++ + ++ + + Sbjct: 334 ILDIKKIKIDALDLQLTRNKKGQLTL 359 >gi|261414472|ref|YP_003248155.1| hypothetical protein Fisuc_0058 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261370928|gb|ACX73673.1| hypothetical protein Fisuc_0058 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326430|gb|ADL25631.1| conserved domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 779 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 55/399 (13%), Positives = 116/399 (29%), Gaps = 48/399 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++ L + +++ F V L + R E + ++G+ I +K I + PF Sbjct: 1 MKKPLKITLIVLGSLILLYF-VTLLVAPKIARSYIEEHSKEMIGRSITIK---NISLNPF 56 Query: 62 PSVF-FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 V + + + +D + + SM L L + + + D+Y+ ++ + Sbjct: 57 TYVLDVDTLAVMEADDKTRFVAFDKFSMNINPLKLFTRTLDISDIYMKALYVRTTQHGE- 115 Query: 121 VSNW------------------------------FQRKSTMDMIHNVILEKIHVKGGRIK 150 N+ + + + L I G I Sbjct: 116 RFNFSDILDFLAQKDSIYYAEHPEEKKVESDSSKSAAEIAAGLPVKLSLRNIVFDKGNII 175 Query: 151 IIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF 210 D + + L D ++ I A +L S S+K + + D + + Sbjct: 176 YQDTKVGSKFHLKDFSINIPAIYLEDNSTGVDVSLKFADGGDLNVKVDANMATYDFNIFL 235 Query: 211 PAKNKAI---------SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261 A+ S+ + F I + GN+ G S+ + Sbjct: 236 NLNRFALSCIKPYLNDSINYKDFAGYLSAQISISGNINSIL-ASNVKGKVSLDKIDLTEV 294 Query: 262 NLELSAKKSRLSG--NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319 + ++ G + D I + + +D KT + Sbjct: 295 SGSKMGAENVTVGINKANLVDNEYLIDSVIVDGAFAHIDLYKDGKTNIDVLLTPKNKAGS 354 Query: 320 NGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358 + D + + E K+ D K S Sbjct: 355 VTDTTAADSTQVEPVAEAAKQEPADTTKVVADSTSATTT 393 >gi|190575340|ref|YP_001973185.1| hypothetical protein Smlt3472 [Stenotrophomonas maltophilia K279a] gi|190013262|emb|CAQ46896.1| conserved hypothetical exported protein [Stenotrophomonas maltophilia K279a] Length = 1284 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 26/306 (8%), Positives = 77/306 (25%), Gaps = 17/306 (5%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70 L + L+ L + + G+ + P + K +R Sbjct: 23 GLVGLALLVGTLSQLLPLAERHPDRIAAWLSERAGQPVHFDQLQTAWTRRGPLLQLKGLR 82 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 I + I + + + ++ + L+ G + + Sbjct: 83 IGAGQG----LAIGEAEVLVSMYSGMLPGRSLTELRLRGLALDLQQGKDGRWSVRGLPKS 138 Query: 131 MDMIHNVI----LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186 + L ++ V GR+ + L ++L++ + + + Sbjct: 139 DTGGDPLDALRRLGELQVIDGRLGVHAPGLGIDTTLPRIDLRLRVNGDRLRVGVRAWAQT 198 Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKN--------KAISLKIQLFPLAYPIIIDLFGNL 238 ++ + D R + + A ++++ + + L Sbjct: 199 DALPLTAVLDVDRARGNGQAWLGADPVDFHAWSPLLAAGGVRLREGKGELNLWLTLRDFA 258 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLN-LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297 V G + L ++ + ++ + +L+ + Sbjct: 259 PVALTTDSDLRDVRVDGAPMPDVATPRLQLQRLQARLRWQRQADGWALQVPRLRLKTEDG 318 Query: 298 STDEDN 303 D Sbjct: 319 EQQLDG 324 >gi|330504818|ref|YP_004381687.1| hypothetical protein MDS_3904 [Pseudomonas mendocina NK-01] gi|328919104|gb|AEB59935.1| hypothetical protein MDS_3904 [Pseudomonas mendocina NK-01] Length = 960 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 38/403 (9%), Positives = 122/403 (30%), Gaps = 37/403 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + L + + + I +Q +++ ++ + PF Sbjct: 1 MPKGLKRALSALLIAVFLYSLIGFLILPGIALRIANQQLAQYAAVPASLQ---RVQLNPF 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + +RI E G + + L + L SG + + D+ +D + G Sbjct: 58 TLELSLWGLRIG--ESGQEQLSFQRLYANLQSDSLWSGALHLSDIELDGARSEILFAKDG 115 Query: 121 VSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS----DLN 166 N + K+ + ++ I ++ ++ D + + DL Sbjct: 116 TLNLTQLFRLPQTQAEPKAENSEPFPLRIDSIRLREKALRFQDLRPSEPVEFAYDSLDLE 175 Query: 167 LQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 L + + +++ + + G + S+ + + P A Sbjct: 176 LHNLSTLAGDNAQMTMTASGPHGARIDWRGQVSLTPITSSGSLNVSDGRLSTFWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL-SGN 275 + L ++ + L + + + + ++ + + + Sbjct: 236 LPLVLKEGQVDLSSDYRLDLSSGTELQLSKVKVQLAPFAIDDPQGKPLVRLQRLDIDNTS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335 ++ V + + + Q + ++ + D + + + AE+ +E+ ++ Sbjct: 296 LDLAKQQVVVGQVRSQGLEAWAAREADGQLDWQKLFAKPESAKSETAEAAEQPDESKPWQ 355 Query: 336 EEEKKNKNDDLK------KDDIQYSVNKKEEKDNSHDKENQEN 372 + + D K + +V+ + + ++ + Sbjct: 356 VLLQDVQLRDYKARLADRVPQQEVAVDVGPLNLDLKNFDSLGD 398 >gi|153009591|ref|YP_001370806.1| hypothetical protein Oant_2261 [Ochrobactrum anthropi ATCC 49188] gi|151561479|gb|ABS14977.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188] Length = 1132 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 105/331 (31%), Gaps = 36/331 (10%) Query: 6 LIGLGFLFSVVLVGAFTVPLF-IDWTDFREDFERQATLIVGKKIAVK-GGIKIHILPFPS 63 ++ + L +++ F + +D R++ ++ I+G+ + G + + Sbjct: 34 ILSICILLVLIVGAGFVILRSGVDSNLLRDEAQKSLMHILGEGASASIGSAALSLDQDSH 93 Query: 64 VFFK--DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL--------- 112 V + D+ I + G S I+ + + LPLL+G++RV + +D Sbjct: 94 VALEARDVSIADPKQGVEISGIKSVRLGLAPLPLLTGKVRVAQLEVDGVSFEMPETKGPG 153 Query: 113 ---NFYLSSKGVSNWFQRKSTMDMIHNVILEKIH--------VKGGRIKIIDQESDQVYF 161 + G+ ++ + LE + + + + QV Sbjct: 154 FWKSLPYDEHGIVDFDAVSGELFAAMRRSLELLRAQDTHVIGIFNSTVAFKVGDEQQVLD 213 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAE------------GTGNFDNKRSAFKITAN 209 + L + ++I + K ++ + N + A Sbjct: 214 IEQARLIENGGKIDIAGSVIWKGKKIALDGKIDRHAGDNSLAGFELNVRDIPVALGSPPE 273 Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK 269 + F L + L G+ ++ + +V G +L +E Sbjct: 274 VSPVINGNRVNPAHFELEASARLSLTGSAADGDRPERLATELAVDGIDMQLGKVEDVRGG 333 Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 RL+ + + I +LQ + + Sbjct: 334 IRLNLEHTVGSRKIEIKSSRLQLGGMQAQFN 364 >gi|189459425|ref|ZP_03008210.1| hypothetical protein BACCOP_00048 [Bacteroides coprocola DSM 17136] gi|189433882|gb|EDV02867.1| hypothetical protein BACCOP_00048 [Bacteroides coprocola DSM 17136] Length = 1101 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 35/288 (12%), Positives = 96/288 (33%), Gaps = 30/288 (10%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLF-IDWTDFREDFERQATLIVGKKIAVKGGIKIHI- 58 +L+ I G L ++L+ F + + A + K+ +K +++ Sbjct: 120 ILKIAGISFGSLIVLILIAITVAINFVFTPSRLTPVVLKTANQALNAKLEMK-SVELTFF 178 Query: 59 --LPFPSVFFKDIRIDQK-------EDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYID 108 P + D + K + + + L + +I + + ++ Sbjct: 179 STFPRFGLKLVDGSLVSKVFCDTAWQKTDSLLSFGKCVVVVNPIDYLINKKITLNYLGLE 238 Query: 109 QPHLNFYLSSKGVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQES 156 + Y S +G++NW D+ + + ++ +K + D+++ Sbjct: 239 DASVYAYKSREGIANWDIVASDTTAVADTASSGKTDLSGGIDIRRVSLKRANVIFDDRDT 298 Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA--EGTGNFDNKRSAFKITANFPAKN 214 L++ L ++A S L++ +V+ +G + + K + + Sbjct: 299 RVYARLTNAALNLTASLQKEHSKLAMRFSNDNVLFWQDGQLLVNKVATDLKTSLDLDRST 358 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWN--EKQPIYSGVFSVAGDFSKL 260 + ++L I D+ G L + + +++ + Sbjct: 359 RTLTLN-DANISLNGITFDVKGTLKRDTVRRALNVDIAYALHAPSLET 405 >gi|254487324|ref|ZP_05100529.1| conserved hypothetical protein [Roseobacter sp. GAI101] gi|214044193|gb|EEB84831.1| conserved hypothetical protein [Roseobacter sp. GAI101] Length = 1100 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 48/418 (11%), Positives = 111/418 (26%), Gaps = 53/418 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKI---AVKGG---IK 55 ++ L LG + V V + + + E + + + + + + Sbjct: 1 MKWSL--LGIVLVVGAVAGTAIYMIRSPIVIPDWIEAKLEARLAQDLPQARIVFDELVLI 58 Query: 56 IHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + P V +D+RI + + +L G+++ D+ + Sbjct: 59 VDEGWRPRVRLQDVRITNPAGAE-LAAFREVRASFSVRGMLDGKVQPRDIALSGVVATLR 117 Query: 116 LSSKGVSNWFQRKSTMD--------------------MIHNVILEKIHVKGGRIKIIDQE 155 G L I ++ + D Sbjct: 118 RDRDGRVALSASTGQAPAERRAATMPELIGQLDAALATPALSRLRSIDLRALTLSYTDLR 177 Query: 156 SDQVYFLSDLNLQISARFLNIISPLSID-----SIKGSVIAEGTGNFDNKRSAFKITANF 210 S++ + L+++ + + + ++ A T + S F +T + Sbjct: 178 SERAWTADGGRLRLTRSGETLGISADLALLGGGADVATLSANYTSKLGDTASQFGVTFDG 237 Query: 211 PAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG--DFSKLLNLEL 265 A L L PI + +L + + + + Sbjct: 238 VAAEDIGAQNPAFAWLRVLRAPISGSVRSSLNEDGAFEPLNATLQIGQGVVQPNAKAAPI 297 Query: 266 SAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL-NFSENGAES 324 R ++ ++ +R +Q S + + D+ L N S Sbjct: 298 PFDGLRSYFSYDPNEKLLRFDELSVQ--SEWVSGRIEGAASLGVDDSGKLANLVAQMRLS 355 Query: 325 MHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDN-----SHDKENQENFSGDK 377 + N D + K ++ D+ + D++ N SGD Sbjct: 356 NLEANPADVY------AKPISIEGADVDVQIAFNPFHLTLGRMDISDRDTTLNVSGDL 407 >gi|148239098|ref|YP_001224485.1| hypothetical protein SynWH7803_0762 [Synechococcus sp. WH 7803] gi|147847637|emb|CAK23188.1| Conserved hypothetical protein [Synechococcus sp. WH 7803] Length = 1476 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 39/330 (11%), Positives = 98/330 (29%), Gaps = 16/330 (4%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 + +R+ + L V + V R D E Q +G +++ + + Sbjct: 14 IAKRLAVALIGGGVVWIAADRVVASVF--ERLRPDLEEQVGKPLGHPVSIGAYRGLSL-- 69 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + I++ + + ++ L++ L L V + + L+ + +G Sbjct: 70 -RGITVGPIKVQRGRRDQSTASVQQLTVGLNPLASLQRLRPVVTVGVKGAQLDLRRNPQG 128 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + + L+ R++I + ++++ ++ + Sbjct: 129 AYWVLGPQPKGGKPPRLDLDVRLTDSARLQIA-PAGLALRAAGRTSVRLDEHRADVSLQV 187 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 ++ +G + +G G + + L P+ + L W Sbjct: 188 ALP-DRGRITLQGRGRWVRPELQLSTRLERIRLERYQGLLPAQLPVQLRGQLGGDLRLGW 246 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-----GNFKISDGNVRISRYKLQSIL- 294 + Q SG S+ G L+ + + +L I Y+ Sbjct: 247 RQGQANCSGGVSLVGVEVSGEPLDQTLRSKQLKVSCRGNALTIPTSAWVYGNYRADLGGQ 306 Query: 295 --PNSSTDEDNKTKVSQDEENLLNFSENGA 322 N + D + ++ + F G Sbjct: 307 VRLNRAFDLRGGLR-ELGKDRTVAFRLLGD 335 >gi|88809580|ref|ZP_01125087.1| hypothetical protein WH7805_00210 [Synechococcus sp. WH 7805] gi|88786330|gb|EAR17490.1| hypothetical protein WH7805_00210 [Synechococcus sp. WH 7805] Length = 1478 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 31/271 (11%), Positives = 83/271 (30%), Gaps = 7/271 (2%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFID--WTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 + GLG + V + + R D E Q +G +++ + + Sbjct: 14 LFTGLGAVLIGGAVVWVAADRIVSAVFERLRPDLEEQVGKPLGHPVSIGSFQGLSL---R 70 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + I++ + + ++ L++ L L V + + L+ + +G Sbjct: 71 GITVGPIKVQRGRRDQSTASVQQLTIGFNPLASLQRLRPVVTVGVKGALLDLRRNPQGAY 130 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + L+ + R+++ + ++++ ++ +++ Sbjct: 131 WVPGPLPKGGKPPRLDLDVRLMDPARLQVA-PAGLALRAAGWTSVRLDENRADVSLQVAL 189 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242 +G + +G G + + L P+ + L W + Sbjct: 190 P-DRGRITLKGRGRWVRPELQLSTRLERIRLERYQGLLPAKLPVQLRGQLGGDLRLGWRQ 248 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLS 273 Q SG S+ L+ + +L Sbjct: 249 GQANCSGGISLVDVEVSGQPLDQPLRSKQLK 279 >gi|254515597|ref|ZP_05127657.1| AsmA family protein [gamma proteobacterium NOR5-3] gi|219675319|gb|EED31685.1| AsmA family protein [gamma proteobacterium NOR5-3] Length = 620 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 103/319 (32%), Gaps = 48/319 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R VL LG ++++ VPLF+D + + G + V G + + P Sbjct: 1 MRIVLWLLGIPAVLLVLAVLLVPLFLDEKALVDIAAERIKAQSGAILTVSGDTSLSLFPK 60 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN-------- 113 ++ +D+ ++ + + + LS +PL + V + ID L Sbjct: 61 VALAARDVSLELPDSQTQVV-AKSLSAGVALMPLFRSSVEVDSIKIDGLTLTTEAADEEA 119 Query: 114 ---------------------FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII 152 ++ + S + + + + ++ + R+ + Sbjct: 120 AKAVAIDTATLSNSELDEFYALRSKARTQAQSEAAASVLAVPLALEVGEVSLSNIRVITV 179 Query: 153 DQESD-------QVYFLSDLNLQISARFL--NIISPLSIDSIKGSVIAEGTGNFDNKRSA 203 D + + SDLNL L +II P ++ + G D Sbjct: 180 DSQGKPISELQLRQLTASDLNLDGRPVPLTIDIIIPSGNEAPPMEIALAGEFRTDLNAET 239 Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL 263 + +++++I P+ + L G + + + S Sbjct: 240 LSL--------DSLNVRITGATAD-PLTLGLSGKVALDTQIADLSLQLQTGKLKGSGTVR 290 Query: 264 ELSAKKSRLSGNFKISDGN 282 S + ++ N +++ N Sbjct: 291 YASFESPQIDANLALTELN 309 >gi|167618782|ref|ZP_02387413.1| hypothetical protein BthaB_20902 [Burkholderia thailandensis Bt4] Length = 842 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 84/305 (27%), Gaps = 35/305 (11%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V ++ I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISNLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERHADGSLFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSI---- 185 + E I ++GG ++ D + D L + + + + L + Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAPELALKGIRIAVLNDGIVHRIALQAPANGTLF 224 Query: 186 KGSVIAEGTGNFDNKRSAFKIT--------ANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 G + K + + P ++ + + AY ID Sbjct: 225 HGPLDFRARFVHKALAPIGKPSNWTGDAYLSTGPVDLPTLARYVNIRLTAYAGRIDNAIW 284 Query: 238 LFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKSRLSGNFKISDGN---VRISRYKL 290 + + +G + G L L +R + I + +SR Sbjct: 285 AHFGDGHLYSAGG-ELRGYDVALRVRPTQPRLDIPVARFGWDLAIDPKRDYTLHLSRLHA 343 Query: 291 QSILP 295 + P Sbjct: 344 ELGQP 348 >gi|330815609|ref|YP_004359314.1| hypothetical protein bgla_1g06660 [Burkholderia gladioli BSR3] gi|327368002|gb|AEA59358.1| hypothetical protein bgla_1g06660 [Burkholderia gladioli BSR3] Length = 1420 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 43/328 (13%), Positives = 95/328 (28%), Gaps = 42/328 (12%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILP 60 R VLIG L+ V + + R E + + ++ + + P Sbjct: 29 RVVLIGGATLYFVAAGSYLGLRYALLPQVDKLRPRIESFVSDKLHAEVRIA-----RLAP 83 Query: 61 -----FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 P V + I K+ I + + L+ + + +D P L Sbjct: 84 HWSGMQPGVDVTALTIRGKDG-VTALTIPHATAAISWRSLVRLSPTLSSLVVDAPDLLIA 142 Query: 116 LSSKGVSNWFQRK--------STMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166 G + + + + I ++ G ++ D E D L+ + Sbjct: 143 RRRDGTLSIAGVDVPTTRKGGNDAFSTWLLRQQAIVLREGTLRWRDAERDAPELTLTGIR 202 Query: 167 LQISARF----LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT--------ANFPAKN 214 L + L + +P + + G + + + + P Sbjct: 203 LAVLNDGLVHRLALQAPANGTLLAGPLDFRARFTHKPLAAIGRPANWTGDAYVSTGPVDL 262 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270 ++ L AY ID + + + + S++G L L + Sbjct: 263 PTLARYAPLPLKAYAGRIDNTIWIGFRDG-RLLDAHGSLSGADVALRVRPTQPRLDIPVA 321 Query: 271 RLSGNFKISDGN---VRISRYKLQSILP 295 + ++ G +++S + P Sbjct: 322 GFGWDLALAPGRDYTLKLSNLHAELGQP 349 >gi|218437452|ref|YP_002375781.1| hypothetical protein PCC7424_0447 [Cyanothece sp. PCC 7424] gi|218170180|gb|ACK68913.1| protein of unknown function DUF490 [Cyanothece sp. PCC 7424] Length = 1887 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 34/344 (9%), Positives = 111/344 (32%), Gaps = 26/344 (7%) Query: 2 LRRVL--------IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 L+R+L I +G +++G+ + + E+ + + +++ + Sbjct: 16 LKRLLQTAKQPKAIAIGITSLTLIIGSSVGFRIVMTQTLPQTIEKTLSDALNREVKLGKV 75 Query: 54 IKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113 + + I + + IE + + L +L + + + Sbjct: 76 ENYSL---THLKIGFSSIPETPKHLNQLTIENIDAQFNPLLILLQGRLPVKITLSNLNGY 132 Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS---DLNLQIS 170 +G NW + + + +K +++ + + N Sbjct: 133 IKQDQQG--NWTIDRIEKIKLPIDLDASFEIKNADLQLQPSGKAKPVTVELDGKGNYLEL 190 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL--KIQLFPLAY 228 + + ++ + + +G ++ ++ A + SL L Sbjct: 191 NQQQQLGYDFTVALLNSQIHLKGNTRLPTGKTEAELKIEKLALPEIASLIPHFPLQINQG 250 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 + ++ + G +++ + N +L + ++ NF + D + I ++ Sbjct: 251 QLNTNVNIEVPSLTNIENSQGQGNISLNNLTATNNQLK-QPIKIVANFALQDTQLIIQKF 309 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-DLNET 331 ++ + ++ + + D + L+ + N D+++T Sbjct: 310 QI------NWSEIKANIQGNLDWKKGLDLAVNLQSFNLSDISKT 347 >gi|302037203|ref|YP_003797525.1| hypothetical protein NIDE1873 [Candidatus Nitrospira defluvii] gi|300605267|emb|CBK41600.1| conserved exported protein of unknown function, DUF748 [Candidatus Nitrospira defluvii] Length = 982 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 43/388 (11%), Positives = 107/388 (27%), Gaps = 49/388 (12%) Query: 3 RRVLIGLGFLFSV-VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R LI L + + L+G P + + + + + I PF Sbjct: 8 RTALIVLCGIVVLYALLGFVVAPY-----AVKTYAIPALAERLRHPVVLG---DVRINPF 59 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 +V + + + + E L + E L+ ++ + P ++ + G Sbjct: 60 TFAVTLTAFEVREPD-QTPMLGFEELFVDFEGTSLVRSAYLFDEIRLTLPFGLVHMQADG 118 Query: 121 VSN-----------------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 N K+ + V + + ++ G I+ D + + Sbjct: 119 TLNLLGLVPPASDSPADPAPPADVKAEKAPVPPVEIRLLSIRQGVIEYRDDSKRKPVTID 178 Query: 164 DL-------NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK- 215 + N N + + ++ EGT + D S ++ + N Sbjct: 179 VVPIEITLRNFGTRRGGENAYAFSAEFGEGETLAWEGTVHLDPLESDGHVSLSNVKLNTF 238 Query: 216 --AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS---GVFSVAGDFSK---LLNLELSA 267 ++ + + L+ +++D + + G F ++ + +S Sbjct: 239 WPSLRDRFRFDILSGAVLVDARYHFDTSVAPVNLQVNEGKFVLSDFRLSAAGDRDPVISV 298 Query: 268 KKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 G + + L + ED + + L + E Sbjct: 299 PALAFEGIRMDLHKREAGVETIALSGTEIRAWLAEDGVVNL----KPLFTPVASSPEVPV 354 Query: 327 DLNETDFFEEEEKKNKNDDLKKDDIQYS 354 + + ++ Q + Sbjct: 355 EPQRPAADPGQPWSVDVQAIEVSKAQVA 382 Score = 37.2 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 28/286 (9%), Positives = 78/286 (27%), Gaps = 31/286 (10%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + ++ + L + L + ++++ ++ P + F + G + Sbjct: 495 RLGVNNLHVADGVSAQEFLGWTALGLNKVSLEVAPTKVKIGEIAWRDPAIRFVTAKDGTT 554 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 N + + + + + + ++ L+ +S + I Sbjct: 555 NLSRVMKAPAGGA---------AQPPVSKPVEATAPKKATPPIPIDVNVVQLSKLSAMFI 605 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242 D V+ G + K ++ ++L + +A + + G + Sbjct: 606 DESIEPVVTTGIQDLSG---TIKGLSSKQIAKAEVALTGTVDEVA---PLKIQGQINPLS 659 Query: 243 KQPIYSGVFSVAGDFSKLLNLELS--AKKSRLSGNFKIS------------DGNVRISRY 288 + F G ++ G + + V + + Sbjct: 660 EDTYTHLTFLFKGVDLTAVSPYAGKYVGYPITKGKLSLDLMYQVSKQQLVGENKVLLDQL 719 Query: 289 KL-QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 + +T + V ++ + DLNE DF Sbjct: 720 TFGEKTNSPDATSLPVRLAVGLLKDRRGRIDIDMP-VRGDLNEPDF 764 >gi|313158507|gb|EFR57901.1| conserved hypothetical protein [Alistipes sp. HGB5] Length = 895 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 48/399 (12%), Positives = 116/399 (29%), Gaps = 33/399 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKG-GIKI-HI 58 M+++ + + +VVLV A P+ + E +R+A ++ ++ + I + Sbjct: 1 MMKKFVKIAAIVVAVVLVIALVAPMVLR-GKIAEIVKREANAMLDARLDFEKLDISLLRH 59 Query: 59 LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFY 115 P S+ K + + +E G + +S+ + L E V + + +P L+ + Sbjct: 60 FPRASLDLKGLTLVGEEPFAGDTIVAAQRISVVVNVMSLFGDEGFEVTKIILSEPALHAH 119 Query: 116 LSSKGVSNWF-------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 + G NW + + + I+ D + + Sbjct: 120 KLADGRVNWDVVKASEEAQGEEETPADAEPSSFRLSVRDFRISDAAIRYEDDSTGMRFST 179 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTG--NFDNKRSAFKITANFPAKNKAISLK 220 + L+L++ + L + + G + N + Sbjct: 180 APLSLRLRGDMSADQTDLDLRLTAKGMRLVSGGIPMLSGAEAELDAVIAADLANSRFTFS 239 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR----LSGNF 276 Q I + L G + + K + + A +R L+ Sbjct: 240 -QNKLRLNAIEVGLDGWVELKDDAVAMDVTAGCDKVQFKDVLSLVPAFYTRDFRNLAAGG 298 Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEE 336 ++S + ++ E + +G + + Sbjct: 299 ELSMALWARGEMRGAALPAFELRTEVRNGSFQYSSLPK---AVDGINIDVRIANPGGVAD 355 Query: 337 EEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSG 375 + DL K ++ + N + + + F Sbjct: 356 KT----EIDLSKFTLRMAGNSLSASAYATNLVSDPTFRA 390 >gi|91776097|ref|YP_545853.1| hypothetical protein Mfla_1744 [Methylobacillus flagellatus KT] gi|91710084|gb|ABE50012.1| conserved hypothetical protein [Methylobacillus flagellatus KT] Length = 1284 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 65/237 (27%), Gaps = 17/237 (7%) Query: 6 LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKG-GIKIHILPFPSV 64 L+ + ++V + + + D+RE + + +G+ + +K P + Sbjct: 16 LLWFAIIAFSIIVLSLRYLVLPNIGDYREHIAGKVSEALGQTVTIKQLHASWS-GLNPHL 74 Query: 65 FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124 +DI I E E + +L +L E R+ + I P L+ + G Sbjct: 75 SLRDIDIYDAE-QRVALSFEHIEASLSWLSILLLEPRLSSLVIHDPALSIRRDTDGTLYI 133 Query: 125 F-----QRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNIIS 178 + I V I D L L+L I + + Sbjct: 134 AGIATNGPSRPEFANWLLRQASIDVSNATITWHDDLRQAPPLRLEKLHLHIENPAWSSLV 193 Query: 179 --------PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 + + G + G + A + L Sbjct: 194 GHHRFGLQAIPSVAASGLIDIRGNLYGKDVSKPDTWRGTLYAHADGTDIAAWNQWLP 250 >gi|254524223|ref|ZP_05136278.1| conserved hypothetical protein TIGR02099 [Stenotrophomonas sp. SKA14] gi|219721814|gb|EED40339.1| conserved hypothetical protein TIGR02099 [Stenotrophomonas sp. SKA14] Length = 1281 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 25/279 (8%), Positives = 74/279 (26%), Gaps = 10/279 (3%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70 L + L+ L + + G+ + P + K +R Sbjct: 23 GLVGLALLVGSISQLLPLAERHPDRIAAWLSERAGQPVRFDQLQTAWTRRGPLLQLKGLR 82 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 I + I + L + ++ + L+ G + + Sbjct: 83 IGAGQG----LAIGEAEVLVSMYSGLLPGRSLTELRLRGLALDLQQGEDGRWSVRGLPQS 138 Query: 131 MDMIHNVI----LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186 + + L ++ V GR+ + + L ++L++ + + + Sbjct: 139 TNGGDPLDALRRLGELQVIEGRLGVHAPDLGIDTTLPRIDLRLRVNGDRLRVGVRAWAQA 198 Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 ++ + D R + + + A + + G L Sbjct: 199 DALPLTAVLDVDRVRGNGQAWLGADPVDFHAWSPLLAAGGAR--LREGKGELNLWLTLRD 256 Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 ++ V + + ++ + ++ R+ Sbjct: 257 FAPVALTTDSDLREVRIDGAPMPDVAVPQLQLQRLQARL 295 >gi|253991172|ref|YP_003042528.1| hypothetical protein PAU_03698 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782622|emb|CAQ85786.1| conserved hypothetical Protein [Photorhabdus asymbiotica] Length = 1270 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 103/342 (30%), Gaps = 25/342 (7%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61 VL+ + +++ + F+ +R + I+G + V G I F Sbjct: 9 VLLATAAIVIIIVALLVSGLRFLLPHINSYRPQLLAKVESIIGVPVDV-GYITGEWESFG 67 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS--S 118 P + +DI + K + +++ + LL D+ Q +N++ + Sbjct: 68 PVLELRDISVKTASAD---VKAKKITVALDIWLSLLRMRWNFRDLTFYQLQVNYHQPLFN 124 Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFL 174 N F + T + + +++ R+ + ++ L+ LN R Sbjct: 125 DQSGNMFSQSDTFSDLFLEQFDHFNLQDSRLTFLTPSGERADLLLPRLTWLNKNNRHRAQ 184 Query: 175 NIISPLSIDSIKGSVIAEGTG-NFDNKRSAFKITANFPAKNKAISLK--IQLFPLAYPII 231 IS SI++ G+V + + I + L +Q Sbjct: 185 GEISLSSINNQHGNVQVKFDLHDTHGVLDNGTIYLQADNVDVHPWLSHWLQDNTGLKDAE 244 Query: 232 IDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 L + + + K+ + + S L + D +L Sbjct: 245 FSLSSWIMLKDGRIDGGQLQLRQGEANWKVADKLHNLSVSDLVLRMRRQDNGWLFDVPEL 304 Query: 291 QSILPNSSTDEDNKTKV-------SQDEENLLNFSENGAESM 325 S++ + K V + D ++ + Sbjct: 305 TSLVTDGQQWPSGKASVLYLPEAKNYDNKDHWRIRAENIQLE 346 >gi|91788733|ref|YP_549685.1| hypothetical protein Bpro_2872 [Polaromonas sp. JS666] gi|91697958|gb|ABE44787.1| protein of unknown function DUF748 [Polaromonas sp. JS666] Length = 1364 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 35/276 (12%), Positives = 76/276 (27%), Gaps = 37/276 (13%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID---------------QKEDGS 78 E+ A+ +G+++ V G + + D+ I + + Sbjct: 58 SQLEKIASEKLGRRVTV-GQVDFKPW-SLELTLNDLVIAKTSPAGATTPVTAGSAQAGAA 115 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--------RKST 130 + I+ + + AE LL + + +P + +G + Sbjct: 116 PQLTIKRIYIDAELESLLRLAPVADAIVVQEPAASLTYLGEGRYDIDDILDRFKASAGEV 175 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + + GG++ IDQ + + L DL L + + Sbjct: 176 PGEPPRFAHYNLELNGGQLDFIDQSVSKTHVLRDLQLTVP------FLSNLKSQREIKTA 229 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250 + R A+ + + L DL L + + Sbjct: 230 PHLAFRLNGSRFDTAAVGTPFAQTRKTDARFTLSG------FDLSPYLAYWPASLPFRLQ 283 Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 +V +K+ + R+SG + S Sbjct: 284 SAVLHADAKVAFEQTPDAVVRISGTATAEKVRLLTS 319 >gi|313683655|ref|YP_004061393.1| hypothetical protein Sulku_2534 [Sulfuricurvum kujiense DSM 16994] gi|313156515|gb|ADR35193.1| hypothetical protein Sulku_2534 [Sulfuricurvum kujiense DSM 16994] Length = 1080 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 106/357 (29%), Gaps = 42/357 (11%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIV-GKKIAVKGGIKIHILPF-PSVFFKDIRIDQK 74 + G F VP + + G +++++ PF + K++ Sbjct: 19 VAGFFGVPYL-----LKNSVPEKVNEATKGGRLSIE---SASFNPFTFHMKLKNVSFKTP 70 Query: 75 EDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKGVSNW--------F 125 ++ ++ S+ + L L G + V D+ + +P + KG N+ Sbjct: 71 QNSD-LFALKAFSINVDPLDYLWRGGLVVRDLSLREPTVTVRRDEKGDFNFKWLTELGGD 129 Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS------DLNLQISARFLNIISP 179 + +I+ + +K G I D + Y L +L+ N Sbjct: 130 SEEDKSLEPPKLIIRHLAIKNGTINYSDYSEGKAYTLDIGPVGFNLDHVDLRNLSNKNGK 189 Query: 180 LSIDSI---KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 + + + G + G + S I N + + + F +PI + G Sbjct: 190 MRLYATINEGGFIDFSGKLD---ALSPLNIRGNVAFNSGKLYTPWRYFKDKFPIEV-ADG 245 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 + S + + ++ + +S +L+ Sbjct: 246 TAAFGFDYRFNSNDLNATELSNLYFGIDKLRIIPKGENR-----NLFTLSALRLKKGDVF 300 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMH----DLNETDFFEEEEKKNKNDDLKKD 349 N +S + ++ + + D + F +E K ++ + Sbjct: 301 PMKKVFNAETLSVNGVDVSVYRSQEGKIDWLTYIDEIQKAFPSDENKTSEPWNFSLG 357 Score = 37.6 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 35/322 (10%), Positives = 103/322 (31%), Gaps = 28/322 (8%) Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 + + + +K D S + ++G+++ + +V + + QP + F S G + Sbjct: 403 LTSGALSVIRKRDQSLSAGLDGIAVDGITIDRARKFAQVQKISVLQPSIAFKRLSDGSID 462 Query: 124 --------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF--LSDLNLQISAR- 172 + S+ + +++++V G + +D+ + L LN+ + Sbjct: 463 LSYHAYAAPSRSSSSSETPWGYRIDELNVSNGSVGFVDEVPHKKVTANLDRLNMSVRGFE 522 Query: 173 -FLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITA-NFPAKNKAISLKIQLFPLA 227 + S LS S K ++ + ++R+ + ++ + Sbjct: 523 SDPGVKSSLSFSSRLNEKSTIDLKSDIVRSSQRAKGTVELKGMDVSLADPYIEPSTYASL 582 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAG---DFSKLLNLELSAKKSRLSG-NFKISDGNV 283 + L G + + +G S++ + ++ ++ L K + + D + Sbjct: 583 RRGSLSLLGTYDYRPSRTSINGKISLSDWVVNDTRDNSVLLGWDKIGATPFVYAYPDNRL 642 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343 +I++ + N + + + + + + + Sbjct: 643 KINQLSIDGFYTN--------ALIDSKKVLNYSTLSKNPKGDANTTKKSGGNPFGLEIVK 694 Query: 344 DDLKKDDIQYSVNKKEEKDNSH 365 L +S S+ Sbjct: 695 LLLHNSSANFSDLSLPLPFKSY 716 >gi|221066079|ref|ZP_03542184.1| protein of unknown function DUF748 [Comamonas testosteroni KF-1] gi|220711102|gb|EED66470.1| protein of unknown function DUF748 [Comamonas testosteroni KF-1] Length = 1297 Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 102/312 (32%), Gaps = 49/312 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LRR++ + L + L+ VP + E++A +G+ + V KI P+ Sbjct: 10 LRRLIWSVLALLLLWLLLWALVPWV-----AKSQLEKRAAEKLGRGVHVG---KIEFAPW 61 Query: 62 -PSVFFKDIRIDQK--------------------EDGSFESKIEGLSMRAEFLPLLSGEI 100 S+ D+ ID+ + +I+ + + A L Sbjct: 62 AMSITLHDLVIDKATKKVAVTADAEGVSAHKDLNSAAEPQLEIKRIFINASAQSLFRLAP 121 Query: 101 RVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKII 152 + + +D P + S G + + L I ++ GR+++ Sbjct: 122 VLDAIEVDAPVVRLTQHSLGKLDIDDVIARLMEPDDEEPAKPVSFALYNIALRDGRVELN 181 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212 D+ + + L DL L I + V+ + + + + Sbjct: 182 DESVQRKHELKDLQLSIP------FISNLASKREIKVLPHLAFDLNGSKFDTSGESTPFT 235 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 ++ ++ ++ + + G + + SG+ ++ E R+ Sbjct: 236 DSRQTAMHLKWEHIDLTPYL---GYVPASVPVQPLSGMLDT---DLQVSFEEKDQPVVRI 289 Query: 273 SGNFKISDGNVR 284 SG +S+ ++ Sbjct: 290 SGKLALSEVALQ 301 Score = 57.6 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 91/308 (29%), Gaps = 25/308 (8%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82 +PL + F Q + ++ + G + + +++ K+ ++ Sbjct: 484 LPLQWLQPYVQAHFTPQLSAMLNTDARISWGEGGVVAEVTELTADKLQLQDKQAPVNIAQ 543 Query: 83 IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS---NWFQ------------R 127 I+ ++ + +++V + + +P L ++G W Sbjct: 544 IKVSGVQVDLAA---RQVQVEAIAVQKPQLAALRDAQGRWMYERWLPAAVPAARSTSQGA 600 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187 K+ +V L I V GG ++ D Q + L +SA + + + + + Sbjct: 601 KTEPGQPWSVKLAAIAVDGGALQFRDAAPVQGRSAQPVQLDVSALRVRLGAFEPLAAKAA 660 Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL---FGNLFWNEKQ 244 E + R F + Q A + + + N Sbjct: 661 PTPLEVSAQLSANRRVQAGQIQFKGLLGLTPVSAQGQLQARAVPLHALEPYFAHKLNVDL 720 Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 G F ++ + +SG+ +++D VR + + Sbjct: 721 VRADGNFRGRLNYLAHAK----GPQVSVSGDVELNDLRVRSTLAAPVQEEAGKPSTAKGA 776 Query: 305 TKVSQDEE 312 ++ Sbjct: 777 LTAVLNDS 784 Score = 47.6 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 26/290 (8%), Positives = 82/290 (28%), Gaps = 52/290 (17%) Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 + ++ + ++ + L ++ + + L ++ + + +P ++ +++GV N Sbjct: 293 LALSEVALQDRQGA-PLLSFDALEVQLQNVQPLQNQMALETVRWVKPEVHVSRNAQGVIN 351 Query: 124 W-------------------------------FQRKSTMDMIHNVILEKIHVKGGRIKII 152 W K+ V +++ ++GG + Sbjct: 352 WLGLNAPAVAPAAPLEKAGPEPASVEASNPAQANAKAQKPNPLVVGVQQFDIEGGIVHWQ 411 Query: 153 DQESDQVYFLS----------------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196 D + + L + A + S+ EG Sbjct: 412 DAATGAAPAALTLAPLTLQARSLAWPMNEALHLKASAGVQAGGQPQAQEEASLAVEGEAT 471 Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAG 255 + + K+ + F +++ + W E + + Sbjct: 472 LKAGKLSLKLEQLPLQWLQ--PYVQAHFTPQLSAMLNTDARISWGEGGVVAEVTELTADK 529 Query: 256 DFSKLLNLELSAKKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDNK 304 + ++ + ++SG ++ V++ +Q + D + Sbjct: 530 LQLQDKQAPVNIAQIKVSGVQVDLAARQVQVEAIAVQKPQLAALRDAQGR 579 >gi|217969639|ref|YP_002354873.1| hypothetical protein Tmz1t_1218 [Thauera sp. MZ1T] gi|217506966|gb|ACK53977.1| conserved hypothetical protein [Thauera sp. MZ1T] Length = 1341 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 86/297 (28%), Gaps = 21/297 (7%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R+ L ++ V+ VG + + + R +G +A++ I+ + Sbjct: 51 RLSDALLLVWCVLAVGVLVLRHLVLPAVGELRVPIAELLGERLGVAVAIE-RIEGGWAGW 109 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 P + + + + + + + L E + I P L +G Sbjct: 110 RPRLRLAGVSLSDAQG-RPALTLPEIDATLAWSSLAMLEPHFHRLEIRAPDLLVRRDPEG 168 Query: 121 VSNWF-------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172 + + + +I + G R+ D+ V L ++ ++ R Sbjct: 169 ALHVAGIALAHGDEGGDGGLGWLLAQRQILIHGARLAWADEARGAPVLELEEVEFRLDRR 228 Query: 173 FLNIISPLSI---DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 L ++ G + + + +L + P Sbjct: 229 TRPARFALEARLPAALGERASLRGELRRIDPLRPQRFAGRLYVELGRTALGNWRPWVDLP 288 Query: 230 IIIDLFGNLFWN-----EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281 ++ G L + ++ G + L + +RL G +++ G Sbjct: 289 FGLEGEGALQAWLDADGRGGHALTADLALDGVRAVLGEDLPVLELARLDGRVELARG 345 >gi|94970321|ref|YP_592369.1| hypothetical protein Acid345_3294 [Candidatus Koribacter versatilis Ellin345] gi|94552371|gb|ABF42295.1| hypothetical protein Acid345_3294 [Candidatus Koribacter versatilis Ellin345] Length = 514 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 42/381 (11%), Positives = 110/381 (28%), Gaps = 36/381 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 + +L+ + V A V W + + R+ G ++ + G P P Sbjct: 11 KWLLLCCAVILLVTAGTALYVAP--RWPYRKAELIRRLEDATGSRVEI-GRFHQTFFPHP 67 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY---LSSK 119 +++ + + + ++ +++ + L+ E + + ++ + F S Sbjct: 68 GCVAENLTLTNSDPAHPKITVQKVTVSGLYSGLIGSEKHIRMLSLEGMRIAFPPQNPESS 127 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIID---QESDQVYFLSDLNLQISARFLNI 176 G N R + + + +++ + +I ++ + + + D+ L+ A I Sbjct: 128 GGQN-DVRPQRVGVPSGIKFDQVEARNSQIVFARKNPEKEPRTFAIYDVILKSFAPGEAI 186 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 + G F + + + L G Sbjct: 187 HFNAVLRIPVPPAEVNVDGVFGPL-------TGDAIGKAQLKGRFTMKNADLSKFHALMG 239 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR----LSGNFK--ISDGNVRISRYKL 290 L + + G + + K + L+ +F + N + + Sbjct: 240 TLSAQGQ---FEGQLEGLTVNATTNVPDFGTKATHHTIPLNTDFTAVVDGTNGDVQFQPV 296 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350 ++L + K +E NG + + ++ K Sbjct: 297 HALLGETKLIATGK----LEEVP----DANGKRLTLHIASQEARIQDLMVLFTH--SKPP 346 Query: 351 IQYSVNKKEEKDNSHDKENQE 371 +Q + DK+ E Sbjct: 347 LQGATRFDMSVQLPPDKKPFE 367 >gi|59714020|ref|YP_206795.1| putative ATPase involved in pili biogenesis [Vibrio fischeri ES114] gi|59482268|gb|AAW87907.1| putative ATPase involved in pili biogenesis [Vibrio fischeri ES114] Length = 1017 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 38/390 (9%), Positives = 109/390 (27%), Gaps = 45/390 (11%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R L + VP ++ Q + ++ + + + + PF Sbjct: 19 IRWSTYALSAYLLYAALFGLLVPYI-----AKQQIPEQLSKLIERPVTLA---DVTFNPF 70 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 + I E + + E ++ F + + I V + +D+P+++ + Sbjct: 71 TLQLDLHQFSIQDAESSTSFVRFENAGVKVNFWKSIFNAAISVEYIALDKPYVDIERLND 130 Query: 120 GVS------------------------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE 155 + + + V++++ + G ++ D Sbjct: 131 TEQLVFNFNDILSAVARNLASEEKVEPSIEEPIDRHKALFPVLIKQTRLAQGHVRFFDGV 190 Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215 ++ D+N + + + + + + + ++ Sbjct: 191 TETELVYPDINFTLGSFSTQSLLTNTEYKNEYRLQIT-DADSGKVELKGQVQLKPLEVVG 249 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 I ++ P + I+ +S + VA + + + G Sbjct: 250 DIHVQKIELPRLWGF-IEKDIIAKLTSGNVNFSSNYHVA-QTIGDTESDDTMSITTDEGV 307 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGAESMHDLNETDFF 334 F ++ N + S+ S V + + + + G + +++ Sbjct: 308 FSVNHLNFNAEDKSIVSLP---SFSVKGIATNVEKQTVTIASVTSQGLQVSAKVDDKGAD 364 Query: 335 EEE----EKKNKNDDLKKDDIQYSVNKKEE 360 + + KDD + K E Sbjct: 365 LVNLFTPKFIAEAPKEHKDDSVETEPKSTE 394 Score = 39.9 bits (91), Expect = 0.66, Method: Composition-based stats. Identities = 38/285 (13%), Positives = 77/285 (27%), Gaps = 36/285 (12%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 V + I + K L++ L ++ + + + QP+ ++ + Sbjct: 524 GVQVNHLSIRDNKLRKPFVKWRSLAVNKFDFDLQKSKLAIDTLSVSQPYARVVINKDRST 583 Query: 123 NWFQR--------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 N K + + KI G D + + Sbjct: 584 NIGDLIVAQPKAKKSKSTTKKKGQKPFALSVRKIAFNNGSAFFADNS-----LTPNFSSG 638 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 I NI SI K +V G K N K + L + + Sbjct: 639 IEQLKGNIGHVSSIPGTKATVDISGNIE-KYAPVKVKGEINPLLKQPYLDLDVVFKSVEL 697 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 + G I G ++A L + ++L G + +++ + Sbjct: 698 TTVNPYSGTYA---GHYIDKGQLTLA--------LNYQLENNQLKGENHVIIDQLQLGKA 746 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 + + + D L +G D+N+ +F Sbjct: 747 SDSDLATSLPLELAIALLQDNDGVIDLGVEVSG-----DVNDPEF 786 >gi|332291457|ref|YP_004430066.1| outer membrane assembly protein [Krokinobacter diaphorus 4H-3-7-5] gi|332169543|gb|AEE18798.1| outer membrane assembly protein [Krokinobacter diaphorus 4H-3-7-5] Length = 893 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 55/381 (14%), Positives = 117/381 (30%), Gaps = 36/381 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI 58 +++ L G + V+++ P FR E + + + + + + Sbjct: 1 MKKALKITGIILLVIVILLVASPFL-----FRGKLEGLLKKTINNNLNAQVEWSSLDLSL 55 Query: 59 ---LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSG----EIRVFDMYIDQ 109 P +V D + G + + L + L I + + + + Sbjct: 56 FRSFPDATVIVNDFTVINNAPFAGDTLASGKELRIEMGVTQLFKNTTDEPIAIDALSLLE 115 Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHN---------VILEKIHVKGGRIKIIDQESDQVY 160 +++ + S G +N+ K T L++ + +I D+ + Sbjct: 116 ANVHVQVDSLGNANYDIVKQTPTTETTTEESSEPFVFNLQEYSLIDSKIIYDDRSTQTHL 175 Query: 161 FLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 L+++N S F I S L + S GT D + + + + Sbjct: 176 ELTEVNHTGSGDFSAIESELDTKTHAVVSFDYGGTHYLDGHELDLEAVIQMELEKQKYTF 235 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKI 278 K + + ++ G + E + F + DF L L ++ L G Sbjct: 236 K-ENLAKINELPLEFNGFVELLEDGNLMDLSFKTPSSDFKNFLALIPKEYRANLDGVETS 294 Query: 279 SDGNVR--ISRYKLQSILPNSSTDE-DNKTKVSQDEENLLNFSENGAESMHDL-NETDFF 334 D V I ++ +PN + N + N + N+T Sbjct: 295 GDFRVSGIIKGKTTETNIPNLDIEIVSNNASFKYPDLPK---RMNNINIDVKIKNDTGIT 351 Query: 335 EEEEKKNKNDDLKKDDIQYSV 355 E + + K D ++ Sbjct: 352 ELTYIEINDLRFKIDQDTFTA 372 >gi|325281809|ref|YP_004254351.1| hypothetical protein Odosp_3212 [Odoribacter splanchnicus DSM 20712] gi|324313618|gb|ADY34171.1| hypothetical protein Odosp_3212 [Odoribacter splanchnicus DSM 20712] Length = 1029 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 76/261 (29%), Gaps = 30/261 (11%) Query: 21 FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL---PFPSVFFKDIRI------ 71 + E+ A + ++ G I++ P + D + Sbjct: 30 IVIHFIFTPAKLTPLVEKTAKEYLNAEVHF-GNIELTFFSTFPDFGIQLDDASVISGTFR 88 Query: 72 -----DQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 + I+ + + L I V D ++QP + Y+ S GV NW Sbjct: 89 DSTANSEPTMQDSLMNIKSCLLTINPIAYLTKNRIVVKDFVLEQPEIYAYVDSAGVPNWD 148 Query: 126 QRKSTMDMI-------------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + D + L + ++ GR+ D+ + L+ +NL + Sbjct: 149 ILRIAADTTTVDTTMADTTTFDSGIRLRNVRIRNGRLVFDDRNTRLYTRLTGINLGVDGY 208 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA-YPII 231 S L +D +V+ G R AF I ++ ++ + I Sbjct: 209 LGKRRSRLKLDFSTENVLFWQEGQLLVNRLAFGIETGMKINRDSLLYTLEKAVVDVNGIR 268 Query: 232 IDLFGNLFWNEKQPIYSGVFS 252 G L + Sbjct: 269 FGAGGTLRGDTVNHTLLVNLK 289 >gi|149278093|ref|ZP_01884232.1| membrane spanning protein, required for outer membrane integrity [Pedobacter sp. BAL39] gi|149231291|gb|EDM36671.1| membrane spanning protein, required for outer membrane integrity [Pedobacter sp. BAL39] Length = 526 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 20/270 (7%), Positives = 73/270 (27%), Gaps = 15/270 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI--- 58 +++ G L+ + ++ + ++ + ++ + + Sbjct: 1 MKKAFKIFGITLI-SLLFLLLIIPYLLPKTISNEVKKWVNQSIKGEVEFE-STSLSFFRH 58 Query: 59 LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 P + + + + LS + + S ++++ ++++D+ +N + Sbjct: 59 FPSLTFSLHNFTLKGSAPFQQDTLLHTKELSFGVDLSTVFSDQVKIEEIFVDEADINIEV 118 Query: 117 SSKGVSNW-------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 KG +N+ + ++ I + + D+ + L+ Sbjct: 119 DEKGNANYNVYESKDNPSVKKDSSQTAIKIQGIFINKSNLVYNDRSIPMMISAKGLSYAG 178 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI-QLFPLAY 228 N I L + ++ + ++ L + Sbjct: 179 EGDLSNEIFDLKSKADIDTINVYYNKTPYLLHKSLNAKLVTKINTNSLDLLFNENDLKIN 238 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFS 258 + I G + + + Sbjct: 239 SLPIRFKGKFSFLKDGYDINFKTQAKETDL 268 >gi|326317114|ref|YP_004234786.1| hypothetical protein Acav_2307 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373950|gb|ADX46219.1| protein of unknown function DUF748 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 1314 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 77/261 (29%), Gaps = 24/261 (9%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES-K 82 P + W ER + G+ + V G + + DI + G+ + Sbjct: 52 PPLVRWG-----LERWGSSFAGRAVTV-GKVDFRPW-TLELTVHDIALAAAAPGAPAQAE 104 Query: 83 IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--------RKSTMDMI 134 I L + E L+ + + ID P L G + Sbjct: 105 IRRLYIDMEMQSLVRWAPVLDALEIDAPRLRVVRGQDGRYDIDDLLQLGAARPGGGEGGG 164 Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 L + ++ G ++ D+ +DQ + L+ L L I + +V Sbjct: 165 GRFALYNLALRDGAVEFTDRTTDQTHRLTGLELGIP------FLSNLPADRQVTVTPRLA 218 Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSV 253 + D + ++++ ++++ L P+ + + + Sbjct: 219 FSLDGSTFDTGARSTPFSEDRNTQARLRIRGLDLSPLRAYWPAGVPLRPQAGTLEAELDI 278 Query: 254 AGDFSKLLNLELSAKKSRLSG 274 L + RLSG Sbjct: 279 GFLQGPEPRLTVGGHA-RLSG 298 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 34/310 (10%), Positives = 84/310 (27%), Gaps = 45/310 (14%) Query: 49 AVKGGIKIHIL--PFPSVF------FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEI 100 ++ + I L P P + +R+D + + L + A + L Sbjct: 271 TLEAELDIGFLQGPEPRLTVGGHARLSGVRLDGPPGSAP-VAFQSLDVHAASVEPLRRSA 329 Query: 101 RVFDMYIDQPHLNFYLSSKGVSNW------------------FQRKSTMDMIHNVILEKI 142 + + P + ++G +W V ++++ Sbjct: 330 HLASVEWSGPEIAVRRDAQGQWDWAAAAGAGGAQGAPRATPAASGAGPSSGAWQVAIDRV 389 Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202 V+ GR+ D+ + + ++ +Q A+ L+ K + Sbjct: 390 AVREGRLAWRDERAARPVAMAWDGVQAQAQSLSWPW-------KDGIPFRLQARMQPAAH 442 Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262 + ++ + +++ A+P + +L P+ + AG F+ Sbjct: 443 GATSRSG-ASEAGEVPATLRVAGTAWPGRGQVAASLR---GLPLSAVDGYAAGAFAPRAG 498 Query: 263 LELSAKK----SRLSGNFKISDGNVRISRYKL---QSILPNSSTDEDNKTKVSQDEENLL 315 + A + +G L + + E +T Sbjct: 499 AVIDADAGVAWNHDNGALVAKVARFVADGVTLACPAGGSCAAPSAEAGRTPAGPGTPPGA 558 Query: 316 NFSENGAESM 325 E Sbjct: 559 WVQAERLEIE 568 Score = 49.9 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 68/238 (28%), Gaps = 19/238 (7%) Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PS + E L + ++ + + + V P L +G Sbjct: 541 PSAEAGRTPAGPGTPPGAWVQAERLEIENAWIDVPARAVSVERAVARAPRLRAERDVQGR 600 Query: 122 SNWF---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 + R + D +V L ++ V+ G + + D L Sbjct: 601 WMFDAWLRQGEADRAPPREARSAGGDAPWSVRLGEVAVESGAVALRDAVPASPVDLRWSA 660 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 + + AR + ++ + G +R ++ ++++ +L Sbjct: 661 IALQARGVRWPQAAGGPAVPVQLSLSGQWE-AGRREPGRLAYEGRLTMAPLAVQGRLQAQ 719 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 P+ + L I GD + K+ + GN + + VR Sbjct: 720 QLPLHL-LEPYAAPWLNVRIVRAEAGFEGD--VDYAATAAGAKASVRGNAALDEVRVR 774 >gi|224825314|ref|ZP_03698419.1| putative transmembrane protein [Lutiella nitroferrum 2002] gi|224602235|gb|EEG08413.1| putative transmembrane protein [Lutiella nitroferrum 2002] Length = 1274 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 32/301 (10%), Positives = 87/301 (28%), Gaps = 23/301 (7%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64 VL+ G + AFT + +R + + G+ + ++ + P + Sbjct: 21 VLLAGGSVVLAAAFAAFTFWFLPNLEQYRAELASLLSRQTGRVVTIRQLQGQWVGVAPQL 80 Query: 65 FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG---- 120 + + DG+ E +S+ + LL R + +D P ++ G Sbjct: 81 DLYGVTMANPRDGA-ALSFERVSLTPAWRSLLVWSPRFAHIVVDGPVVDLSRGHDGVIYL 139 Query: 121 ------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARF 173 + + + + R+ D + L + S+ Sbjct: 140 NGFDISSGGAGRTGDGSAANWWLNQPSLVINNARLSWQDDLLGLPRFRLDKGQAEFSSDL 199 Query: 174 LNIISPL---SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + ++ ++ D+ R+ + + + + + Sbjct: 200 FGHGLKITGQPSAALGRAIALSAQWRGDDVRTWKEWQGELRVDWQGVKVS------PWSR 253 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDF--SKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 + +G + E ++ FS + L+ +A +G + ++ Sbjct: 254 YLKQWGGVRSGEGDGVFQVAFSQGRIDRLKANVALKNAAYAPTDAGELNVPKLGGQLEVV 313 Query: 289 K 289 + Sbjct: 314 R 314 >gi|58696956|ref|ZP_00372447.1| conserved hypothetical protein [Wolbachia endosymbiont of Drosophila simulans] gi|58536807|gb|EAL60035.1| conserved hypothetical protein [Wolbachia endosymbiont of Drosophila simulans] Length = 893 Score = 70.7 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 51/393 (12%), Positives = 117/393 (29%), Gaps = 55/393 (13%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--- 78 F DW+ +R+ ++ K+ + G +++ ++ P + ++ + E+ Sbjct: 66 VAATFKDWSGYRQYIIKELEKTYDAKVHIGGKVEVSLI-TPKLTIYNVYVQYNENKEQKL 124 Query: 79 -FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV 137 + + +R FL L ++ + + N N +T + V Sbjct: 125 SDLISVRKIEIRPSFLSLFLFSLQPKSITLFGMKSN-------KENLINIINTKASGNTV 177 Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197 + +K ++ +D +N++ A N + + G + Sbjct: 178 DI---VIKDSQVSFKSDFADI------VNIKEVAVKKNRQFSGKVKVGDNNYDFSGKVDI 228 Query: 198 DNKRSAFK---------ITANFPAKNKAISLKIQLFPLAYPIIIDLFG------NLFWNE 242 K T N + +L + + + + + Sbjct: 229 TKKNVHISVESNFVNLLFTGNRNQEELQGNLTLTINNSSGSVSDLAKIINLSFLSHVIPS 288 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS------DGNVRISRYKLQSILPN 296 + S S+ +L++ +K + SG + + N+ S+ L SI + Sbjct: 289 ENIKISSNISLNESEFTATDLKIDSKSMQASGTIQNDRKGNHTNFNISFSKVDLDSIQND 348 Query: 297 SSTDEDNK-------TKVSQDEENLLNFSENG---AESMHDLNETDFFEEEEKKNKNDDL 346 S + K V ++ N + + D + K N L Sbjct: 349 SQRTMNMKDLLECFRAVVPKNLSLNFNMEASNIQYQNKILDNFRAVLKSTDGKVKVNTLL 408 Query: 347 KKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 K I N + F+GD ++ Sbjct: 409 KFPGI---NNISYLSGEISNNNVLSEFNGDLLV 438 >gi|197336906|ref|YP_002158516.1| putative ATPase involved in pili biogenesis [Vibrio fischeri MJ11] gi|197314158|gb|ACH63607.1| putative ATPase involved in pili biogenesis [Vibrio fischeri MJ11] Length = 1017 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 43/397 (10%), Positives = 108/397 (27%), Gaps = 51/397 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R L + VP ++ Q + + + + + + PF Sbjct: 19 IRWSTYALSAYLLYAALFGLLVPYI-----AKQQIPEQLSKFIERPVTLA---DVTFNPF 70 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 + I E + + E ++ F + + I V + +D+P+++ + Sbjct: 71 TLQLDLHQFSIQDAESSTSFVRFENAGVKINFWESIFNAAISVEYIALDKPYVDIERLND 130 Query: 120 GVS------------------------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE 155 + + + V++++ + G ++ D Sbjct: 131 TEQLVFNFNDILSAVARNLASEEKVEPSIEEPIDRHKALFPVLIKQTRLAQGYVRFFDGV 190 Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215 ++ D+N + + + + + + + ++ Sbjct: 191 TETELVYPDINFTLGSFSTQSLLTNAEYKNEYRLQIT-DADSGKVELKGQVQLKPLEVVG 249 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 I ++ P + I+ +S + VA + + + G Sbjct: 250 DIHVQKIELPRLWGF-IEKDIIAKLTSGNVNFSSNYHVA-QTIGDTESDDTMSITTDEGV 307 Query: 276 FKISDGN--------VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 F ++ N V + + + I N V+ L S + D Sbjct: 308 FSVNHLNFNAEDKSIVSLPSFSVNGIATNVEKQTVTIASVTSQG---LQVSAKVDDKGAD 364 Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364 L + + KDD + K E S Sbjct: 365 LVNLFTPK---FIAEAPKEHKDDSVETEPKSTEVSQS 398 Score = 39.9 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 77/275 (28%), Gaps = 26/275 (9%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 V + I + K L++ L ++ + + + QP+ ++ + Sbjct: 524 GVQVNHLSIRDNKLRKPFVKWRSLAVNKFDFDLQKSKLAIDTLSVSQPYARVVINKDRST 583 Query: 123 NWFQR--------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 N K + + KI G D + + Sbjct: 584 NIGDLIVAQPKAKKSKSTTKKKGQKPFALSVRKIAFNNGSAFFADNS-----LTPNFSSG 638 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 I NI SI K +V G K N K + L + + Sbjct: 639 IEQLKGNIGHVSSIPGTKATVDISGNIE-KYAPVKVKGEINPLLKQPYLDLDVVFKSVEL 697 Query: 229 PIIIDLFGNLF---WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 + G ++ Q + + + + K N + + +L G SD + Sbjct: 698 TTVNPYSGTYAGHYIDKGQLTLALNYQLENNQLKGEN-HVIIDQLKL-GKASDSDLATSL 755 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSE 319 ++L ++ D +VS D + + Sbjct: 756 PLELAIALLQDNDGVIDLGVEVSGDVNDPEFSLGA 790 >gi|260060600|ref|YP_003193680.1| outer membrane assembly protein [Robiginitalea biformata HTCC2501] gi|88784730|gb|EAR15899.1| outer membrane assembly protein [Robiginitalea biformata HTCC2501] Length = 915 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 95/331 (28%), Gaps = 42/331 (12%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------- 55 +++L + + +L+ +PLF++ V + ++ G Sbjct: 4 KKLLKIVAGILVFLLLLVIGIPLFLE-----AKIGPILRSNVNR--SITGDFDFREADLS 56 Query: 56 -IHILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE---IRVFDMYIDQ 109 I P V +DI + G K + L G I + ++++ Sbjct: 57 LIRNFPNARVSLRDITLTTAAPFEGDTLFKAREAYLVMGIGELFKGAGEPIGIRELFVSG 116 Query: 110 PHLNFYLSSKGVSNWFQRKSTM--------DMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 L L ++ N+ L+ + +I +DQ S + Sbjct: 117 ADLRLRLDAEERPNYLVAAEDPAATGATAASDGFTFDLQGYQIADSKISYMDQSSGISFL 176 Query: 162 LSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 L D+ S S L + S+ + D + + Sbjct: 177 LEDIQHTGSGDLSLAESRLETRTDARISLGMDSVQYLDRNSLQLDARIGIDLETDTYTF- 235 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL------LNLELSAKKSRLSG 274 ++ L + + G++ E+ F K S ++ R SG Sbjct: 236 LENEGLINQMPLVFEGSVQLVEEGQEIDLDFRTPSSDFKNFLALIPEAYSKSLEEVRTSG 295 Query: 275 NFKISD------GNVRISRYKLQSILPNSST 299 F + + RI ++ +++ Sbjct: 296 QFTLEGSITGRSDDTRIPNLDIRMEAVDAAF 326 >gi|74318164|ref|YP_315904.1| hypothetical protein Tbd_2146 [Thiobacillus denitrificans ATCC 25259] gi|74057659|gb|AAZ98099.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 1169 Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 103/339 (30%), Gaps = 44/339 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGI---KIHI 58 LR++ + L L L + V F + ++ +G+ + + ++ Sbjct: 8 LRKIALSLPTLIVAGLFVLYLVTGFF----LVDPLAQKLLPWIGED-KLASRLSARRVTF 62 Query: 59 LP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 P + +++ +K + E L + + L R+ D+ + QPH + Sbjct: 63 NPLTLEATVEGLKLAEKSGA-PLASFERLYLDLDSTGLFRWAWRIRDIDLVQPHATVEVR 121 Query: 118 SKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV---------- 159 G NW K + + ++++ I + GR+ D Sbjct: 122 RGGTLNWAALIARLREDEKPPSETMVRLLVDHIRIADGRVAYRDANRAGEPFTALLEPLG 181 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 L L+ + + + + G+V +G + S +I K +S+ Sbjct: 182 IELDGLS-TLPEDRGAYLLAARLPAQGGTVKWKGDLALNPLASRGEIGLEGVRLAKLLSV 240 Query: 220 ---KIQLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLLNLEL---SAKKSRL 272 + + L + V G + +L L L Sbjct: 241 VKSPRNFDLPSGTLAASLRYRFAMVQNAAGDDAPWVRVDGANLVVRDLTLAPRDGGVPAL 300 Query: 273 --------SGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 NF ++ ++++R L ++ D Sbjct: 301 QLAEARVADANFDLATRAIQVARISLDGAKLAATRDARG 339 >gi|114331260|ref|YP_747482.1| hypothetical protein Neut_1265 [Nitrosomonas eutropha C91] gi|114308274|gb|ABI59517.1| conserved hypothetical protein [Nitrosomonas eutropha C91] Length = 1296 Score = 70.3 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 33/301 (10%), Positives = 85/301 (28%), Gaps = 16/301 (5%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIE 84 D ++R D T + G+ + + I+ + P + + + + ++ Sbjct: 39 LPDIGNYRSDIAAAITRVAGQPVRID-VIQANWDGLRPHLSMQGVSVHDQQGHLVLI-FP 96 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------QRKSTMDMIHNVI 138 G+ + +L GE+ ++ ID+P L ++G+ + R+ + + Sbjct: 97 GIEGTVSWRSMLRGELNFHEIVIDRPALVTRRDTEGLLHIAGITLGGDRQESGFFDWLLR 156 Query: 139 LEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197 ++ VK I D V++ +NL + R + + + + Sbjct: 157 QRRLVVKQAIIYWQDDLRLGTVHYFESVNLLLQNRQGGKRHQFGLRAQSSGPLFS-KVDI 215 Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257 + + + + + L +L Q V Sbjct: 216 RGDLIGDSVQMLSAWQGRLFVQLQDFDLENWQEWMTLPADLTLKRGQGSVRAWMDVGAGN 275 Query: 258 SK--LLNLELSAKKSRLSGNFKI---SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312 + ++ L + + + R K + V + Sbjct: 276 LSRWVADINLRKAAIHFAQHLSLLEIDHLYGRSGWSKTEDAQDTDEQWFVRDLSVELKDL 335 Query: 313 N 313 Sbjct: 336 P 336 >gi|300721800|ref|YP_003711078.1| hypothetical protein XNC1_0785 [Xenorhabdus nematophila ATCC 19061] gi|297628295|emb|CBJ88856.1| conserved hypothetical protein; putative exported protein [Xenorhabdus nematophila ATCC 19061] Length = 1272 Score = 70.3 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 36/348 (10%), Positives = 95/348 (27%), Gaps = 28/348 (8%) Query: 2 LRRV---LIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56 +RR+ L+ + +V+ + F ++R+ + + + G IK Sbjct: 1 MRRLPGILLATAAIVIIVVALLVSGLRFFLPHINEYRQQLAEKIAGATDMPVNI-GYIKG 59 Query: 57 HILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 H F PS+ +DI + + + + + LL D+ Q +N+ Sbjct: 60 HWESFGPSLEIRDISAKAEHGD---IHAKKIVLSLDIWRSLLQRRWYFRDLSFYQLQVNY 116 Query: 115 YLSSKGVS--NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQ 168 + + G + + ++ + + R + ++ L+ LN Sbjct: 117 HKALFGQNGDSVLSEPDSLSSLFLEQFNHFDLNDSRFTFLTPSGEKADLRLPQLTWLNED 176 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGN-FDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 R +S SI+ +G V + + + + + + L L Sbjct: 177 NRHRAQGSVSLSSINGQEGVVQVKLDLKDINGLLNDGALYLQADDIDMRLWLSRWLKDNT 236 Query: 228 YPIIIDLFGNLFWNEKQPIYS---GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + + + + + + L + Sbjct: 237 GLENAHFSLASWISLQDGRIDRGYLQLKQGQADWHVGDEKHQLAVNNLLLQMRRQGEGWL 296 Query: 285 ISRYKLQSILPNSSTDEDNKTKV-------SQDEENLLNFSENGAESM 325 L ++ ++ K ++ + Sbjct: 297 FDIPNLSNLKTDNQQWPVGHIKALYLNESPQYQNKDHWRIRAENIQLE 344 >gi|294338954|emb|CAZ87298.1| conserved hypothetical protein; putative exported protein [Thiomonas sp. 3As] Length = 1316 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 103/357 (28%), Gaps = 48/357 (13%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPS 63 VLI G V G V + + A + + V K+ P + Sbjct: 21 VLIVAGLFVFYVAFGYLAVGPLAE-----HYIPKLAQSQLDSRATVG---KVAFDPLHLN 72 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 + +++ + + L + + L + IDQP +N ++ G N Sbjct: 73 LTVDQLQLSTPQGA-PLAGFGKLFVDFAPVSLFRWAWTFRQIRIDQPQVNVAIAQGGAMN 131 Query: 124 W----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY--FLSDLNLQISA 171 W + D + V++E++ + GG ++ D Y L+ LN+QI+ Sbjct: 132 WGALVRALQRGPKPAKPSDTLPRVVIEQLQIAGGTLRYADANRPHPYATQLTPLNVQIND 191 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 + + T + + + A+ + L + Sbjct: 192 LSTLPKARGQYAISLVLPEQKATLRWKGYVGVNPLVSGGQAELTELDLAAAARAVP---- 247 Query: 232 IDLFGNLFWNEKQPIYSGVFSV-------------AGDFSKLLNLELSAKKSRLSGNFKI 278 +L L +S G + L A + N K+ Sbjct: 248 -NLSSTLQITSGTASIHAAYSAVQGQQGWLWAINDLGAQIQTLAARAGAAAVQ-WQNLKL 305 Query: 279 SDGNVRISR--YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 + ++ +QS+ + + + ++ GA+ F Sbjct: 306 DRAKIDGAKRTVSMQSLSLDGLSAASGRDQLQFHTA-----QLQGAQLDWGRQHAGF 357 >gi|77166114|ref|YP_344639.1| hypothetical protein Noc_2656 [Nitrosococcus oceani ATCC 19707] gi|254435890|ref|ZP_05049397.1| conserved hypothetical protein TIGR02099 [Nitrosococcus oceani AFC27] gi|76884428|gb|ABA59109.1| Conserved hypothetical protein 2099 [Nitrosococcus oceani ATCC 19707] gi|207089001|gb|EDZ66273.1| conserved hypothetical protein TIGR02099 [Nitrosococcus oceani AFC27] Length = 1288 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 80/315 (25%), Gaps = 29/315 (9%) Query: 3 RRVLIGLGFLF--SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-L 59 R + LG L V++ GA + + R + +G+++ V I + Sbjct: 9 RYFYLSLGILACCIVLIFGALWTLWTVVEDEP-ATISRWLSTALGREVQVS-EIALSWRG 66 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLSS 118 P + +RI + + + A GE + + I L Sbjct: 67 GEPRLHLTGVRIIDPQTERQLLSFREIYLDAAPSRTSAEGEWMLRHLTIIGGELTVERKP 126 Query: 119 KG--------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 G + L ++ + I+ +D ++ L LQ+ Sbjct: 127 AGCIRVYGLQDLESPCPHPPRLPAWVLNLTQLTLVDMAIRWLDPVLERK----PLELQVR 182 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 L K ++ + K P + LK + LA Sbjct: 183 ELQLRNEEDFHWVEGKATLAEKFGSEIAVKAKFTGGGIRDPRSQGVLYLKGEGLRLASWQ 242 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 D L + + A ++ F + + + Sbjct: 243 ASDFLAGLHFIHGRGDLELGLR-----------WGKAALHQVLAKFDWENLKITGNTQTA 291 Query: 291 QSILPNSSTDEDNKT 305 ++ S Sbjct: 292 EAPGSISFQRLAGTA 306 >gi|110834450|ref|YP_693309.1| hypothetical protein ABO_1589 [Alcanivorax borkumensis SK2] gi|110647561|emb|CAL17037.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 977 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 29/336 (8%), Positives = 94/336 (27%), Gaps = 44/336 (13%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FP 62 + L+ L + + + F+ R++ + G+++ + ++ I P Sbjct: 15 KALVILAGFYLL----YVLLGFFVAPGLVRDNARDALAELTGREVVIS---EVKINPLAL 67 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 S I E L + E L + ++ ++ + V Sbjct: 68 SATVNGFAI-NDEQTQVLLGFNQLYVNFEVSSLFRWRWHFKQIGVEGLNVRAQRNPGSVF 126 Query: 123 NWF------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL-- 162 N+ + N+ ++++ + G ++ + + + L Sbjct: 127 NFDDIIAHMETQQADSDPKVEPVSDAESSLPNISVDELSLSHGELRYTEATGKEPHQLIL 186 Query: 163 ------SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216 ++ + N + G+ G F + ++ Sbjct: 187 PVAFTVTNFSTVAKGEDQNGYAIHLEGPEGGAFDWNGHFAFSPFLAHGHLSIEKVDLVSL 246 Query: 217 ISL---KIQLFPLAYPIIIDLFGNLFWNEKQPIY--SGVFSVAGDFSK---LLNLELSAK 268 L +++ + + + + + +G ++ + + Sbjct: 247 AKLAEGEVRFTVPSGELDLQTDYLFSTEQGPRVMVNNGELTLRDLQIQKPGEQAPSVEVP 306 Query: 269 KSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDN 303 ++G + + +++ L+ N+ ED Sbjct: 307 ALTVTGISVDSAKKEIQLPNVALEQPQVNAVLAEDG 342 Score = 50.3 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 34/278 (12%), Positives = 86/278 (30%), Gaps = 37/278 (13%) Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 + +D++I + + + ++ L++ + EI++ ++ ++QP +N L+ G+ Sbjct: 286 LTLRDLQIQKPGEQAPSVEVPALTVTGISVDSAKKEIQLPNVALEQPQVNAVLAEDGLDL 345 Query: 124 WFQRKSTMDMI-------------------------HNVILEKIHVKGGRIKIIDQESD- 157 L+ + ++G +++ D+ + Sbjct: 346 ATLFLPVDPQEAEQRKQDVKEKAQEAAERIAEAETVWVTRLDNLAIEGNTLRLTDRTLNP 405 Query: 158 -QVYFLSDLNLQISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFP 211 Q L+D L +S + + + GS+ G G + K Sbjct: 406 AQTMTLTDGGLTLSNLIIGEEATFTWQGKATLQEQGSLTHSGEGQLAPLSISAKGALTAL 465 Query: 212 AKNKAISL---KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN-LELSA 267 + L + + +DL + + +G V + + Sbjct: 466 PLAPLSPWLEREAPLKMTSGQLSVDLQSTVKGDTPDITVNGSAGVINLNLQEGGRPLIKV 525 Query: 268 KKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDNK 304 K ++ + + VR+ L I D + Sbjct: 526 NKGQVKNVSLATATQQVRVGEILLTGIDMLHRVDAQGR 563 >gi|254490478|ref|ZP_05103664.1| conserved hypothetical protein TIGR02099 [Methylophaga thiooxidans DMS010] gi|224464222|gb|EEF80485.1| conserved hypothetical protein TIGR02099 [Methylophaga thiooxydans DMS010] Length = 1264 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 48/372 (12%), Positives = 112/372 (30%), Gaps = 25/372 (6%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R++ + + L+G D +++ A+ G I ++ Sbjct: 11 RQLFYLIVVGIVLSLLGVMGAVWLSDEVAKRKDEIAAWASDKTGYPITIESAGLYWFDLI 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKG 120 P + + + QK + E + + + L + E V D I+ L+ + G Sbjct: 71 PKLEVRQAVLLQKTSNTAVVTAEQIYLSLDILASIEQREPVVADASINGVDLSVARDNAG 130 Query: 121 VSNWF---------QRKSTMDMIHNVI-LEKIHVKGGRIKIIDQESDQ---VYFLSDLNL 167 + D + + L+++ + I DQ+ Y L N+ Sbjct: 131 QLRLTGLESGERRVSATTLPDALRWLSWLKQLELADISIDYSDQQRPTIAGRYHLQQANV 190 Query: 168 QISARFLNIISPLSIDS-IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 S + + L + + + +V GT + + + + +++ + L Sbjct: 191 AFSDNYWQTQASLQLPAHLGNTVNFSGTAEIHSDYTLKAWQGKLLSDDVSLAPILAEQSL 250 Query: 227 AYPIIIDLFGNL-----FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI--S 279 +I +L + +V + + + L G K Sbjct: 251 NGALITSGIASLVIQAEQKTTGELSADVNLAVNDLMLLSDKTDEKLEVNGLQGRLKWQTQ 310 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339 ++ LQ + + + +V+Q +N+L N D++ + Sbjct: 311 GQTWQLQSEGLQLQVADHAWPLT-SFEVTQSADNVLRAQSNYLRLS-DISSLALLMDNMP 368 Query: 340 KNKNDDLKKDDI 351 DI Sbjct: 369 APLLTTQPAGDI 380 >gi|289810066|ref|ZP_06540695.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 61 Score = 69.9 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 28/61 (45%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR L L L V++ G + L ++ DFR +Q ++ + G ++ H+ P Sbjct: 1 MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60 Query: 62 P 62 Sbjct: 61 L 61 >gi|77457070|ref|YP_346575.1| hypothetical protein Pfl01_0843 [Pseudomonas fluorescens Pf0-1] gi|77381073|gb|ABA72586.1| putative conserved exporte protein [Pseudomonas fluorescens Pf0-1] Length = 1267 Score = 69.9 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 102/301 (33%), Gaps = 29/301 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R +GL L V++ ++ + ++R D E +A+ +G + + G ++ + F Sbjct: 13 RWGLGLCALVLVLMALYVSLGRELTPLVAEYRTDIEDKASDALGMPLQI-GELEGNWSGF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + D+ + G+ +++ + + LL+ E+R+ + ++ ++ Sbjct: 72 APILLAHDVMVG---SGANALRLDRVRAVPDLWASLLAREVRIAHLELNGLKISLKEGED 128 Query: 120 GVSNWFQRKSTMDMIHNVI--------LEKIHVKGGRIKII-DQESDQVYFLSDLNLQIS 170 G D + ++++ V ++ + +++ LNL+ Sbjct: 129 GKWALEGLPVQQDQPMDPEQLFNRMQMIQQLSVLDSQVTLQPREQAPLTLTYVGLNLKTG 188 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + + L++ V + ++ + + L + Sbjct: 189 TSRQRLDARLTLP-DGQPVALSLRTRIRPSQ----------WQSSEVEGYVSLPQSDWSK 237 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 + WN + G V L + + +L+G + ++I+ L Sbjct: 238 WLPERVTQQWNFSEIKAGGELWVNWREGALQSAAIRLNAPQLTGAY-AERKPIQINNLAL 296 Query: 291 Q 291 Sbjct: 297 N 297 >gi|330811783|ref|YP_004356245.1| hypothetical protein PSEBR_a4822 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379891|gb|AEA71241.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 977 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 48/372 (12%), Positives = 107/372 (28%), Gaps = 35/372 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + LI L + I +Q + ++ +I + PF Sbjct: 1 MPKGLIRAIGALLTALALYSLLGFLILPGIALRIANQQLATLATVPAQIQ---RIELNPF 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 V + I + G + E L + L SG + + D+ +D+P + G Sbjct: 58 SLEVTLWGLNIGEP--GKEQVGFERLYANLQLDSLWSGALHLVDIELDKPKTEVMFAKDG 115 Query: 121 VSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166 N + +++I + GG + D + D Sbjct: 116 QLNLLGLFKLPASEPTPADPEAKPFPLRVDRIKLAGGYVHFQDLRPSEPIEFLYDTLDFE 175 Query: 167 LQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS----- 218 L+ + + + +++ + G + G + S + Sbjct: 176 LKNLSTLPDDNADMTLVAAGPEGGQIDWTGNFSLTPIASQGTLKVTGGQMKAWWPYVRDA 235 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN--- 275 + + L + D NL + + + SVA K + K RL + Sbjct: 236 VPLVLENGVLNLSTDYKLNLAKGTELLLNNVAVSVAPFAIKAPDGRPLVKLERLDVSETT 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335 ++ V + + + Q + ++ + D + D + L + + Sbjct: 296 VDLAKQQVIVGKIRSQKLETWAAREADGQ----LDWQKLFASQPAKPQVKAEPTSAPAAA 351 Query: 336 EEEKKNKNDDLK 347 + K K Sbjct: 352 DSPKAEPAPPSK 363 >gi|77919952|ref|YP_357767.1| hypothetical protein Pcar_2358 [Pelobacter carbinolicus DSM 2380] gi|77546035|gb|ABA89597.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380] Length = 1102 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 101/309 (32%), Gaps = 19/309 (6%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82 + D +RE + ++ + + +++ G + P+ +DIRI + S Sbjct: 35 FLMTFDLNAYRESLANRLSIALDQPVSI-GSAHMSWRQGPAFNIRDIRIGEPLTESG-GD 92 Query: 83 IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM--IHNVILE 140 I L + LPLL G++ DM I++P + L S + + + + Sbjct: 93 IAHLFLHPRLLPLLMGKVVFDDMIIERPIYHARLLSSSSDTGTDLPTIPLRALLQTIQVH 152 Query: 141 KIHVKGGRIKIIDQESDQ----VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196 + + G++++ + + D+ ++ +NL + L+I + T + Sbjct: 153 NLTIIDGQLRLENAQDDRHPLAPLQINAINLNVRNLLTGRPGKLNIHAELPQKEGLATLD 212 Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGD 256 ++ F + L++Q+ +A L L E P SG Sbjct: 213 VKG-KTTFDTNLGN-WRQIKGQLRLQMENIATE---QLRSWLSLPEATPALSG-----RA 262 Query: 257 FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN 316 +L +A S + + + + +Q+ + + Sbjct: 263 SLELNADGSAASGLHFSASLSGKNLQLAWPG-RYAKPPAVKKVTVSGTWVAAQNINRVTD 321 Query: 317 FSENGAESM 325 Sbjct: 322 LDLYLDTLN 330 >gi|170727102|ref|YP_001761128.1| hypothetical protein Swoo_2757 [Shewanella woodyi ATCC 51908] gi|169812449|gb|ACA87033.1| protein of unknown function DUF748 [Shewanella woodyi ATCC 51908] Length = 1024 Score = 69.5 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 49/378 (12%), Positives = 120/378 (31%), Gaps = 39/378 (10%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDG 77 T+ + + + Q + + + +++K + I PF V ++ I + ED Sbjct: 34 SFVTLLGLLIPSIAEQQLPIQLSETLKRPVSLK---DVSINPFNLHVSLTELHIFE-EDN 89 Query: 78 SFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSK----------------G 120 + + L+ F L +G I + D+ + P+L S+ Sbjct: 90 TKFTGFAALNFELSFWHSLINGAISIKDVTLTGPYLLAERLSQTEGAEFNFSDIITEMTN 149 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + + + ++++E++ + G + ID +D D+NL I Sbjct: 150 TTTSAPSEENPATLPHIMVERLAIVSGNLNFIDTLTDSQLSYPDINLDIKGFDTLTEISN 209 Query: 181 SIDSIKGSVIAEGTGNFDNK-RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 ++ G + + ++ + ++ LK P + I Sbjct: 210 QQNA-ANRFSIRLQGKNGGEIATQGQLQLSPLNITGSLQLKEIALPEFWSF-ISEEFQAH 267 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG--------NVRISRYKLQ 291 + + +S F+++ ++E + G F + D + + + + Sbjct: 268 LDTGKFNFSTDFALS---MSETSVEQPLILTTSQGQFALKDILFTHENRPLISLPLFAAE 324 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 +I N S + ++S+ L + + + DL K K + Sbjct: 325 NIALNLSQQ---QLQISRLYSEKLTLDGHVSAAGLDLVPLFMPNFISTKTKEPGDTQAAE 381 Query: 352 QYSVNKKEEKDNSHDKEN 369 + + E Sbjct: 382 VNTETSTPLPKLAVIDEP 399 >gi|188582287|ref|YP_001925732.1| AsmA family protein [Methylobacterium populi BJ001] gi|179345785|gb|ACB81197.1| AsmA family protein [Methylobacterium populi BJ001] Length = 634 Score = 69.5 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 44/336 (13%), Positives = 97/336 (28%), Gaps = 30/336 (8%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF-ESK 82 P ++ R G +A +G +I +LP P V F+DIR+ + + + Sbjct: 25 PWSVEAPSAARFVSRGLQQSWGVALAARGRTEIVLLPLPRVVFEDIRLTEGDAAGPVLAS 84 Query: 83 IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH---NVIL 139 LS++ L +G + V + +D + + + I Sbjct: 85 GGNLSLQLGLAALFTGRVEVDSLTLDGGEVVLPQEASDTRWSATVERLTRSIAGEVGDRP 144 Query: 140 EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN 199 +I + +K D + D++L IS + S+ G +++ Sbjct: 145 RRIILARCAVKGRDPRDGTLQTARDVDLTISWPAWSE-----------SLAVSGGFHWNG 193 Query: 200 KRSAFKITANFP---AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG- 255 + + P L + + G+L + + +G Sbjct: 194 GSARITLAGLRPHALLSGGESPFTAALTWPTGSLNAEGSGSL-HDGLKASGTGSLQTRSL 252 Query: 256 -----DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD 310 L L + + G+F+ + ++ ++S + S Sbjct: 253 HRTLALSGGGLALSPFVEDFSVEGSFEAAASQIQFPSVTVRS----DGNVLEGAGSASFG 308 Query: 311 -EENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 N + + F + +D Sbjct: 309 SPRNAVQATLAAESLNLSPLLAGFLRLTGFDSADDP 344 >gi|239818117|ref|YP_002947027.1| hypothetical protein Vapar_5159 [Variovorax paradoxus S110] gi|239804694|gb|ACS21761.1| conserved hypothetical protein [Variovorax paradoxus S110] Length = 1394 Score = 69.5 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 34/289 (11%), Positives = 77/289 (26%), Gaps = 26/289 (8%) Query: 31 DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 D+R E QA+ +G + + FP+ +D+ + + ++ + Sbjct: 50 DYRGALEAQASKAIGVPVRIGSITARSDSLFPAFELRDVVLHDAQ-KREALRLVRVVASV 108 Query: 91 EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV-------SNWFQRKSTMDMIHNVILEKIH 143 L + +YI+ P L+ G + T ++ Sbjct: 109 SPRSLWR--LNFEQLYIEGPQLDVRRDVLGKLHVAGLHMDTDTTGETRAADWFFAQRELV 166 Query: 144 VKGGRIKIIDQE-SDQVYFLSDLNLQISARFLNIISPLSIDSIKGS-VIAEGTGNFDNKR 201 V+GG ++ D++ + L+D+ L G G F Sbjct: 167 VEGGTVRWTDEQRQAEPLLLTDVRFVARNTARRHGLRLDATPPVGWGERFTLRGQFRQPL 226 Query: 202 SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF-------GNLFWNEKQPIYSG----- 249 + + + + + + L G L Sbjct: 227 LSVRSGRWQTWDGQVYADLPYMDVTRLGRYVSLDARIREGSGALRLWADVKRGQIVGGAA 286 Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNF--KISDGNVRISRYKLQSILPN 296 + + L ++G ++ + + S LQ + Sbjct: 287 DLGLDRIDASLGRGLQPLVLRAVTGRLAGQLDEEKLEFSTAALQFDTAD 335 >gi|114562771|ref|YP_750284.1| hypothetical protein Sfri_1595 [Shewanella frigidimarina NCIMB 400] gi|114334064|gb|ABI71446.1| protein of unknown function DUF748 [Shewanella frigidimarina NCIMB 400] Length = 1128 Score = 69.5 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 45/348 (12%), Positives = 107/348 (30%), Gaps = 33/348 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-P 62 R+L + F+V L+G + I + ++ T +G+ + ++ I I PF Sbjct: 17 RILKLALYGFTVYLLGCAVLGGLIPY-IAKQQAPTILTEQLGRNVTLQ---DISINPFTL 72 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + I++ + + + + S + + D+ + QP S Sbjct: 73 ELTVSGFAINELDSPKTFASFATAYGNIQLWQSITSWAVVIEDIRLQQPTFRVARSETAN 132 Query: 122 SNW-----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 ++ + +I + + I ++ G + D +D + Sbjct: 133 QHFVFNFSDIITRLSQNTQPAPTSTEPTIIPAINIANIQIQQGVFTLDDNVTDTHINYPN 192 Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLKIQL 223 +N+ ++ + F + A + L + Sbjct: 193 INVSLAQFNSLSSALNDKQDQVNRYNLRIEDQFKGSVALQGQFQLAPLAIKGDVKLT-GI 251 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL-ELSAKKSRLSGN----FKI 278 Y +D + E +G ++V L + ++ K+++ N Sbjct: 252 DLSRYWSFVDQLFAINLAEGTLSLNGQYAVTLQDKNLAPISHINVTKAQIVINHFKALHQ 311 Query: 279 SDGNVRISRYKLQSILPNS--STDEDNKTKVSQDEENLLNFSENGAES 324 D + I L +I +S + + + LN + GA+ Sbjct: 312 QDEKIAIDVLALNNIDLDSHKKRVSIGEFQTEKGNI-KLNITPTGADL 358 >gi|152984100|ref|YP_001350776.1| hypothetical protein PSPA7_5452 [Pseudomonas aeruginosa PA7] gi|150959258|gb|ABR81283.1| hypothetical protein PSPA7_5452 [Pseudomonas aeruginosa PA7] Length = 1088 Score = 69.5 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 53/408 (12%), Positives = 113/408 (27%), Gaps = 39/408 (9%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M + + + L LV L I R +Q ++ +I P Sbjct: 1 MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLR-VANQQLAQYATVPARLE---RIEFNP 56 Query: 61 F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 F + +R+ +++ + L + L ++ + D+ ++ PH K Sbjct: 57 FSLELTLWGLRLGDEKN--PQVAFRRLYANLQLDSLWKRQLHLADVELEGPHTELLFDEK 114 Query: 120 GVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 G N + +++I + G + D + D Sbjct: 115 GQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPV---DFRFDP 171 Query: 170 SARFLNIISPLSIDSIKGSVIA----EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 L+ +S L D K +++A G +++ + IT+ K I LK Sbjct: 172 LGFELHNLSTLPDDGAKMTLVATGPDGGRLDWEGDLTLVPITSRGHLSIKDIQLKAWWPY 231 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN---------- 275 + + L + K + G Sbjct: 232 VRDNAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSINSPQGKPLAKLASLDV 291 Query: 276 ----FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331 ++ V + + Q + ++ ++D + + A + T Sbjct: 292 AATTLDLAKQEVVLGEVRSQGLEAWAAREKDGQLDWQKLFA-DFTPPPRKAPAPKPKENT 350 Query: 332 DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 D E + K D + S DK +++ S + Sbjct: 351 DAAAEPAETAKAASEPATDRAAKATAIASGETSKDKPAEKDASVAETE 398 >gi|75909088|ref|YP_323384.1| hypothetical protein Ava_2878 [Anabaena variabilis ATCC 29413] gi|75702813|gb|ABA22489.1| Protein of unknown function DUF490 [Anabaena variabilis ATCC 29413] Length = 1829 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 37/333 (11%), Positives = 88/333 (26%), Gaps = 14/333 (4%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR + LG + + + D E ++G+ I + ++ Sbjct: 16 RRASLVLGIMALAGVATGAWWARNYVYNDLAPLVETNLEQLLGRSIKIG---QVEGFTLS 72 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 S+ F + I + + ++ +L V D+ + +P++ G Sbjct: 73 SLRFSSLSIPATPTDPDTVTAQAVDVQFSPWQILVTRTLVLDVTLVKPNVYIQQEQDGRW 132 Query: 123 NWFQRKSTMDMIH-NVILEKIHVKGGRIKIIDQESDQV-------YFLSDLNLQISARFL 174 + K+ L+ +++ G I+++ S + + Sbjct: 133 VTAEVKTGEGSGAIQTQLQTLNIVDGNIELLSASSPTKPQGSVVLTQVGGVARFSPDNER 192 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 + G+V G + + ++ A + L +QL + ID Sbjct: 193 IGYQINGQLTRGGTVKISGETQPKTQLTNLQVVAQSLLASDISRL-VQLPIVLQSGRIDA 251 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 Q S + + L S +G + + + Sbjct: 252 DLAAQIPANQSEISITGTATTNQVTAKVQNLPQSFSNANGRLIFQGQTIALENLRTNFGQ 311 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + A+ + D Sbjct: 312 V--PLLANGTVNTQTGFNLAAQVKSVSAKQLLD 342 >gi|254427727|ref|ZP_05041434.1| conserved domain protein [Alcanivorax sp. DG881] gi|196193896|gb|EDX88855.1| conserved domain protein [Alcanivorax sp. DG881] Length = 978 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 36/390 (9%), Positives = 97/390 (24%), Gaps = 55/390 (14%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 + F+ R++ + G+++ + ++ I P S I E Sbjct: 27 YALLGFFVAPGLVRDNARDALAELTGREVVIS---EVKINPLALSATVNGFAI-NDEQTD 82 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------------- 125 L + E L + +D + + V N+ Sbjct: 83 VLLGFNQLYVNFELSSLFRWSWHFSQVDLDGLTVRGQRNPGSVFNFDDVLAHIDSQLTDS 142 Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--------SDLNLQIS 170 + N+ + + + G ++ + + + L ++ + Sbjct: 143 AEDVEPEPAPEDAGALPNISVGALALTNGDLRYTEAAGKEPHQLVLPVAFTVTNFSTVAK 202 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF-----PAKNKAISLKIQLFP 225 N + G+ +G F + +++ AK ++ + Sbjct: 203 GENQNGYAIRLEGPDGGAFDWDGRFEFSPFLAQGRLSIEKVDLVSLAKLAQGEVRFTVPS 262 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK---LLNLELSAKKSRLSG-NFKISDG 281 + D + + +G ++ + +S ++G Sbjct: 263 GELDLQTDYLFTTEPGTRVVVSNGELTLRELQIQKPGEDAPSVSVPALTVTGIAVDSEKQ 322 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341 + + L N+ D D E + ++E K+ Sbjct: 323 EITLPEVSLSQPAVNAVLAADG-------------LDLATLFLPVDPEEAEQRKQEVKEK 369 Query: 342 KNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371 + ++ +V D Sbjct: 370 AQEAAERIKEAETVWVTNLGTLKVDGNTFR 399 >gi|188994009|ref|YP_001928261.1| hypothetical protein PGN_0145 [Porphyromonas gingivalis ATCC 33277] gi|188593689|dbj|BAG32664.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 1515 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 42/341 (12%), Positives = 89/341 (26%), Gaps = 23/341 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFR----EDFERQATLIVGKKIAVKGGIKIH 57 +RR + + +V L + + + + + +G + + G I I Sbjct: 31 MRRSKWIVVAVLTVAFCLLILPNLILQIPSVKRSVAGRVQTELSKALGTHVRI-GHISIG 89 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL- 116 + DI I + E L+ + LPLL G + + + L+ Y Sbjct: 90 WWRQ--MEIDDIVIFDRA-RRPAVSAERLTGGLDLLPLLKGRLSFSSARLFKGELDVYRS 146 Query: 117 SSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 N + + + I ++ R+ Q L L+L Sbjct: 147 RPDTALNIQFLLDALKSKNPEEPSRLRLNINTILLRNCRLSASGLYKAQSDTLGLLDLNA 206 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 R S ++ E D K ++ L I L Sbjct: 207 KVRLFQADSTGLKAQLRHLSFLEKNTGLDLKELHADVSLRGD-TLGVARLHISLPNSHIG 265 Query: 230 IIID---LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS---GNFKISDGNV 283 ++ L + + K L L L+ ++ G Sbjct: 266 MVSGYCILSPESSALPAIRVTDLGGRIRPSDLKGLLPALDTMDDILNLSVPELTVASGEA 325 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 + + + ++ + E + + + Sbjct: 326 VLPEISMNYGDELTLQAGIGLAEIGKKERMHVRLRLDELKL 366 >gi|332828897|gb|EGK01580.1| hypothetical protein HMPREF9455_02112 [Dysgonomonas gadei ATCC BAA-286] Length = 891 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 51/396 (12%), Positives = 125/396 (31%), Gaps = 38/396 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI--- 58 +++VL +G + V+++ ++PL + A + K+ +K +++ Sbjct: 1 MKKVLTIIGIVLVVIIIAMISIPLLF-KDKIKTAVLNVANEQLNAKVDIK-DFGLNLFSN 58 Query: 59 LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 P ++ +D I D + + S+ + + L + + +D+ + + Sbjct: 59 FPNATLSLEDASITGIGDFEKDTLIQAKSGSVTIDLMSLFGNNYNISRINLDRASVYAKV 118 Query: 117 SSKGVSNWFQRKSTM---------DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 + G +N+ K+ N+ L+KI V I + + L+ + Sbjct: 119 LADGRTNYDIMKTDSTATGTEAENSTPFNLNLKKITVNDCNIVYQNDSTKMKLVLNKWSG 178 Query: 168 QISARFLNIISPLSIDS--IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 +IS F + + S + S +G + + T N N + Sbjct: 179 EISGDFSASETTIKTTSEISEISFYMDGIPYLNKVKGNADATINANFDNMKFTFD----- 233 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--RLSGNFKISDGNV 283 + NE + G F++ G + ++ +L + + + Sbjct: 234 ---------KSEIRINELKASIDGWFTMQGKNYEDMDFDLKLNAPDTQFKDILSLVPA-M 283 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343 + +K ++ D K + + +M E + Sbjct: 284 YTADFKDVKTSGTATLDAYIKGLWQGENYPAFDVKIGVNNAMFQYPSLPKSVNEINVAVD 343 Query: 344 DDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 + K + + + + FSG+ I Sbjct: 344 INSKGGSLDNMIIDISKFSFNLGGNP---FSGNLNI 376 >gi|89899180|ref|YP_521651.1| hypothetical protein Rfer_0366 [Rhodoferax ferrireducens T118] gi|89343917|gb|ABD68120.1| conserved hypothetical protein [Rhodoferax ferrireducens T118] Length = 1381 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 44/387 (11%), Positives = 97/387 (25%), Gaps = 45/387 (11%) Query: 1 MLRRVLIGLGFLFSVVLVGAFT-------VPLFIDW--TDFREDFERQATLIVGKKIAVK 51 +L+ I + +VL F + I +FR E A +G + + Sbjct: 11 LLKTWTIVARWSLGLVLAAWFVFGLTWGALHWLIVPRIGEFRPQLEAYAARALGVPVRIG 70 Query: 52 GGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111 PS D+ + E G ++ + + + +Y+++P Sbjct: 71 AITAQSSGMIPSFELTDVELFD-EQGREALRLPRVLAALSPRSVWR--LGFEQLYVERPQ 127 Query: 112 LNFYLSSKGVSNWFQRKSTMDM-------IHNVILEKIHVKGGRIKIIDQ-ESDQVYFLS 163 L+ + G + + ++ G I D+ + L Sbjct: 128 LSIRRALDGKIRVAGLDFSQTSDTGSSAVDWFFSQLEFVIRDGSILWTDELRAAPTLALQ 187 Query: 164 DLNLQISARFLNIISPLSIDSIKGSV---IAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 ++L + L D+ + G + + + + Sbjct: 188 QVDLVVRNAGRRHN--LRFDATPPPLWGERFSVRGLMTQPLLSRHRGHWRDWQGQLYAAF 245 Query: 221 IQLFPLAYPIIIDL-------FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK---- 269 ++ D+ G L A +N+ L A+ Sbjct: 246 ARVDLSELQRYADVGVDLRQGKGALRAWVDVSRGQVTGGTADVALSEVNVTLGAQLQALE 305 Query: 270 -----SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 RLSG + + + V + G E Sbjct: 306 LLSVSGRLSGRLPANGFQLSTQALAFD--TRDGLRWPGGNVSVDYTAAEG-RVAARG-EL 361 Query: 325 MHDLNETDFFEEEEKKNKNDDLKKDDI 351 D + + + D + + + Sbjct: 362 KADKLDLQALSQIADRLPIDPVTRAAL 388 >gi|126658784|ref|ZP_01729928.1| hypothetical protein CY0110_08031 [Cyanothece sp. CCY0110] gi|126619882|gb|EAZ90607.1| hypothetical protein CY0110_08031 [Cyanothece sp. CCY0110] Length = 792 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 34/298 (11%), Positives = 79/298 (26%), Gaps = 17/298 (5%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93 E Q + + + + + F + + GL + L Sbjct: 58 PVVEEQLRTFLNRPVELGELEGFSFN---YIRFGQTELLTTPTDPANVSMSGLKIAYNPL 114 Query: 94 PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI-- 151 + ++ +P G Q + + L+ + ++ G I Sbjct: 115 KYIIDRKLEIEVIAIEPSAYIEQGKDGNWLLTQFNTLNPNSP-IRLKNLGIQKGEAIIVS 173 Query: 152 --IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209 D E + + +L+ I N + S + +G N + + N Sbjct: 174 RSKDGEKETPINIENLSGIIQPINNNSEIKFQVKSNFVNSDNKGNFNIAGIFNQENRSTN 233 Query: 210 FPAKNKAISLKIQLFPLAYPIIID---LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS 266 + ++ +I L PI ++ + NL + + +A N+E Sbjct: 234 LLIRGHQLNAEIISQVLPLPIELEAGKIDANLEVSLANKKLTNFQGIAKLTHVDTNVEGL 293 Query: 267 AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 ++ + G + + Q + + N S Sbjct: 294 PQRLKTHGQLQFKGKKINFDEVITQFGEIRG--VVKGYLDLDKG----FNLSAKTQVI 345 >gi|296444564|ref|ZP_06886528.1| AsmA family protein [Methylosinus trichosporium OB3b] gi|296257832|gb|EFH04895.1| AsmA family protein [Methylosinus trichosporium OB3b] Length = 634 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 87/291 (29%), Gaps = 32/291 (10%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI 83 P E+ Q G + A KG +LP P + D+ + + Sbjct: 50 PWTFSTGAMLEEIAGQIEASSGLRAAAKGRSTFSLLPRPHIAIDDVAFADPS-FALTIEA 108 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK---------GVSNWFQRKSTMDMI 134 E L LPLL+G + + + + +P + L K + + Sbjct: 109 ERLRGNVRLLPLLTGRLELANAELLRPRIRIALDRKPMTASGAAARAAAARPSTPEAETA 168 Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 L + + G + ++ ++ + R I + L S+ + Sbjct: 169 DRAPLGSVAILSGAVAVVFEDGREE------------RIDMIDATLDWSSVGAPATLDAA 216 Query: 195 GNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253 ++ +R + P + + + + ++ G + + +P ++G S Sbjct: 217 FSWRGERPRAMLWFQKPGALLRGEASPMMMRIDSVSLRMEADG-VAQSGPKPRFTGRLSA 275 Query: 254 AGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRISRYKLQSILPN 296 + + +++ + + ++S + + Sbjct: 276 SSPSLRDALRLADVSAPLPGRFENVQIAAKASVGLRDFQLSDLHFSADEND 326 >gi|167837763|ref|ZP_02464646.1| hypothetical protein Bpse38_14837 [Burkholderia thailandensis MSMB43] Length = 853 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 35/305 (11%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V D+ I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISDLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARLAPTLSSLVVDDPDLLTERHADGALFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSI---- 185 + E I ++GG ++ D + D L + + + + L + Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAPELALKGIRIAVLNDGIVHRIALQAPANGTLF 224 Query: 186 KGSVIAEGTG---NFDNKRSAFKITANFPAKNKAISLK-----IQLFPLAYPIIIDLFGN 237 G + T + + L + AY ID Sbjct: 225 HGPLDFRARFVHKALAPIGKPSNWTGDAYLSTGPVDLPTLAHYANIRLTAYAGRIDNAIW 284 Query: 238 LFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKSRLSGNFKISDGN---VRISRYKL 290 + + +G + G L L +R + I + +SR Sbjct: 285 AHFGDGHLYRAGG-ELRGYDVALRVRPTQPRLDIPVARFGWDLAIDPKRDYTLHLSRLHA 343 Query: 291 QSILP 295 + P Sbjct: 344 ELGQP 348 >gi|317494222|ref|ZP_07952638.1| hypothetical protein HMPREF0864_03407 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917995|gb|EFV39338.1| hypothetical protein HMPREF0864_03407 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 1267 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 102/336 (30%), Gaps = 44/336 (13%) Query: 2 LRRV-------LIGLGFLFSVVLVGA-FTVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ L L ++++ G +P FR + G + + G Sbjct: 1 MRRLSGYLLATLVTLTVLVALIVSGLRLALPHL---ERFRPQIVEKIEQYSGVPMKI-GS 56 Query: 54 IKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + F P++ +DI + Q + +I+ +++ + LL + D+ + Sbjct: 57 LDASWQSFGPTLDVRDISLAQPKGN---IRIQRVTVALDVWQSLLHWRWQFRDLTFYHLN 113 Query: 112 LN----FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLN 166 N F SS G + T+ I + ++ ++ + + +L Sbjct: 114 ANSNEPFSRSSSGSDGF--ESDTLTNIFLYQFDHFILRDSKVTFPSPSGTRIQLNIPNLT 171 Query: 167 LQISARFLNIISPLSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 +A + + +G + + +K + +Q Sbjct: 172 WLNTATRHRAEGQVMFSTQEGQHGNLQVRMDLHDKNGLLS----------DGQVYLQADE 221 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 + + + N +S + ++ L K+ + + ++ + Sbjct: 222 IEMKPWLSRWVNRNTGLHSAKFSLASWLTVTDGEIQGGHLVLKQGEANWSTADKQHDLTV 281 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321 LQ D LN + +G Sbjct: 282 DNLNLQVGRVAGGWTFD---------IPQLNLATDG 308 >gi|28871617|ref|NP_794236.1| hypothetical protein PSPTO_4482 [Pseudomonas syringae pv. tomato str. DC3000] gi|28854869|gb|AAO57931.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 1002 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 36/386 (9%), Positives = 102/386 (26%), Gaps = 45/386 (11%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + L V+V + FI +Q ++ ++ P+ Sbjct: 16 MSKGLKRTLGSLLAVIVLYSLLGFFILPGVALRIANQQLANYSTVPAKLE---RLEFNPY 72 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 73 TLELTLWGLNIGTP--GKEQVAFEKLYANLQIDSLWTKALHLQRVELIKPKAELLFDKQG 130 Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168 N + + + +I + G + D + LN + Sbjct: 131 KLNLAQLFKLPASEPAKDQPPSKPFPLRIGEIKLADGYVHFQDVRPSEPIEFLYDALNFE 190 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 + + + G + G + S + P A Sbjct: 191 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLVPITSEGTLKVTDGKMKLWWPYVRDA 250 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L + K S + + + ++ +S + Sbjct: 251 LPLALENGVLNFSTAYKLDLSKETELKLTNLSASVAPFALNTPDGRPLVRLQRLDVSETS 310 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335 ++ V + + + Q++ ++ + D + + + + Sbjct: 311 VDLARQLVSVGKIRSQTLETWAAREVDGQ--------------LDWQKLFANPPGKPAAP 356 Query: 336 EEEKKNKNDDLKKDDIQYSVNKKEEK 361 ++ ++ Q S + Sbjct: 357 KKPAVDEKAAEPAPAPQTSAQASTQP 382 >gi|330958042|gb|EGH58302.1| hypothetical protein PMA4326_05621 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 985 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 36/331 (10%), Positives = 91/331 (27%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R L VLV + FI +Q ++ ++ P+ Sbjct: 1 MSRGLKYTLGSVLAVLVLYSLLGFFILPGVALRIANQQLANYSTVPAKLE---RLEFNPY 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 58 TLELTLWGLNIGTP--GKEQIAFEKLYANLQIDSLWTRAVHLQRVELIKPKTELLFDKQG 115 Query: 121 VSNWFQ----------RKSTMDMIHNVILEKIHVKGGRIKIID--QESDQVYFLSDLNLQ 168 N Q + + +I + G + D + + LN + Sbjct: 116 KLNLAQLFKLPANEPTADEPPSKPFPLRIGEIKLADGYVHFQDMRPSAPIEFLYDALNFE 175 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 + + + G + G + S + P A Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLVPIASEGTLKVTDGKMKLWWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L + S + + + ++ +S + Sbjct: 236 LPLALEDGVLNFSTAYKLNLAKETELQLTNLSASVAPFALNTPDGRPLVRLQRLEVSETS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + Q + ++ + D + Sbjct: 296 VDLAKQRVTVGKIRSQKLETWAARESDGQLD 326 >gi|194366671|ref|YP_002029281.1| hypothetical protein Smal_2899 [Stenotrophomonas maltophilia R551-3] gi|194349475|gb|ACF52598.1| conserved hypothetical protein [Stenotrophomonas maltophilia R551-3] Length = 1283 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 25/279 (8%), Positives = 72/279 (25%), Gaps = 10/279 (3%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70 L + L+ L E + G+ + P + K +R Sbjct: 23 GLVGLALLVGTLSQLLPLAERHPEKIAAWLSERAGQPVRFDQLQTAWTRRGPLLQLKGLR 82 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 I + I + L + ++ + L+ G + + Sbjct: 83 IGAGQG----LAIGEAEVLVSLYSGLLPGRSLTELRLRGLALDLQQGEDGRWSVRGLPRS 138 Query: 131 MDMIHNVI----LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186 + L ++ V GGR+ + L ++L++ + + + Sbjct: 139 DSGGDPLDALRRLGELQVIGGRLGVHAPGLGIDTTLPRIDLRLRVNGERLRVGVRAWAQT 198 Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 ++ + D + + + + + G L Sbjct: 199 DALPLTAVLDVDRAGGNGQAWLGADPVDFHAWSPLLAAGGVR--LREGKGELNLWLTLRD 256 Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 ++ V + + ++ + + ++ R+ Sbjct: 257 FAPVALTTDSDLRDVRIDGAPMPELAAPQLQLQRLQARL 295 >gi|26991388|ref|NP_746813.1| hypothetical protein PP_4704 [Pseudomonas putida KT2440] gi|24986456|gb|AAN70277.1|AE016668_3 conserved hypothetical protein [Pseudomonas putida KT2440] Length = 978 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 33/331 (9%), Positives = 92/331 (27%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + L ++ + I +Q ++ +I + PF Sbjct: 1 MYKGLTRAAGAIVALVALYSLLGFLILPGVALRIANQQLAQYATVPAHLE---RIELNPF 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + ++I + G + E L A L + + + + +D+P + G Sbjct: 58 SLELTLWGLQIGEP--GKEQVGFERLYANASLDSLWTKALHLEAVELDKPRNEVLFAKDG 115 Query: 121 VSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168 N + + + + I + G + D + ++NL+ Sbjct: 116 TLNLTGLFKLPASEAKPEEPPSDPFPLRIGSIKLIDGYLHFEDLRPSEPIEFLYDNMNLE 175 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 + + + G + +GT + S + P A Sbjct: 176 LKNLSTLPNDNADMTLVASGPNGGRIDWKGTLSLSPIASEGTLKVTDGKMKLFWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ ++ L S + + +S + Sbjct: 236 VPLVLEDGVVSLDTHYKLNLAKQTELLLDNVSVRIAPFAIKAPDGRPLARLASLEVSETS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 + V + + + + + ++ ++D + Sbjct: 296 IDLVKQQVTVGKVRSEKLETWAALEKDGQLD 326 >gi|218781036|ref|YP_002432354.1| hypothetical protein Dalk_3196 [Desulfatibacillum alkenivorans AK-01] gi|218762420|gb|ACL04886.1| protein of unknown function DUF490 [Desulfatibacillum alkenivorans AK-01] Length = 1309 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 51/408 (12%), Positives = 120/408 (29%), Gaps = 42/408 (10%) Query: 2 LRRVLIGLG-FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVG-KKIAVKGGIKIHIL 59 ++R+ L L ++ G VPL + +E + A +++ I+ Sbjct: 1 MKRIFKILLWALLVFLIFGFIVVPLALRTDFVQERLTQYAENATKDLPVSISFS---RIM 57 Query: 60 PFP--SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 P V + ++I + + E +++ +L EI + + +D P ++ + Sbjct: 58 PDVLSRVTVEGLKISAQN--EVIFRTESVTVGPLLPGVLGEEISLGHVIVDNPTVSLVRN 115 Query: 118 SKGVSN---WFQRKSTMDM----------IHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164 G N WF D V + K +K GRI++ D + Sbjct: 116 PDGSWNAASWFPPSEADDNQKDKEPFKLTGFPVSISKAEIKNGRIQVKVYAKDGAVLMDQ 175 Query: 165 -LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA-----IS 218 L + R + L+ +++ + K A + K Sbjct: 176 PFQLDLKGRLKPFAAVLNNLTLREADKENADFLTCKGVYDLKDDAETQVQIKGESPSLAQ 235 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278 + L + + +P ++ + L K L+ K Sbjct: 236 WRALAPGLPDLENLKISLTAQGPLDKPEFTYALRCDPGQTIEGIAGLDLTKEELTAVVKA 295 Query: 279 SDGNVRISRYKLQSILPNSSTDEDN----------KTKVSQDEENLLNFSENGAESMHDL 328 + + I + + + + + + + + + Sbjct: 296 TVNGLVIDKLAPSVPGAVNGKIFAGMKGLWPEADIAIDAVLLQSKVFTYDISRSNAFLEY 355 Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376 N + E E ++ + +++ + N + D F+ D Sbjct: 356 NRSGHSELEL----TANINQAELKLTANGSAKGLLDQDAPLSVQFNAD 399 >gi|167571137|ref|ZP_02364011.1| hypothetical protein BoklC_14947 [Burkholderia oklahomensis C6786] Length = 1397 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 36/298 (12%), Positives = 81/298 (27%), Gaps = 32/298 (10%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSM 88 ++R E + + ++ + G + H P V ++ I ++ + + Sbjct: 57 DEYRPRIETFVSQKLHAELRI-GRLAPHWSGMQPGVDISNLTIRGRDG-RVALSVPHATA 114 Query: 89 RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILE 140 + L + + +D P L + G + E Sbjct: 115 ALSWRSLARFAPTLSSLVVDNPDLLTERRADGSLFVAGVAVPTTKTGADDTFSAWLLKQE 174 Query: 141 KIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSI----KGSVIAEGTG 195 I ++GG ++ D + D L + + + + L + G + Sbjct: 175 AIVLRGGTLRWRDAQHDAPELALKGIRIAVLNDGIVHRIALQAPANGTLFHGPLDFRARF 234 Query: 196 NFDNKRSAFKIT--------ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 K + + P ++ + AY ID + + Sbjct: 235 VHKALAPIGKPSNWTGDAYLSTGPVDLPTLARYANIRLTAYAGRIDNAIWAHFADGHLYG 294 Query: 248 SGVFSVAGDFSKL----LNLELSAKKSRLSGNFKISDGN---VRISRYKLQSILPNSS 298 +G + G L L +R + I + +SR + P Sbjct: 295 AGG-ELRGYDVALRVRPTQPRLDIPVARFGWDLAIDPKRDYTLHLSRLHAELGQPPLP 351 >gi|167563993|ref|ZP_02356909.1| hypothetical protein BoklE_15662 [Burkholderia oklahomensis EO147] Length = 1397 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 36/298 (12%), Positives = 81/298 (27%), Gaps = 32/298 (10%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSM 88 ++R E + + ++ + G + H P V ++ I ++ + + Sbjct: 57 DEYRPRIETFVSQKLHAELRI-GRLAPHWSGMQPGVDISNLTIRGRDG-RVALSVPHATA 114 Query: 89 RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILE 140 + L + + +D P L + G + E Sbjct: 115 ALSWRSLARFAPTLSSLVVDNPDLLTERRADGSLFVAGVAVPTTKTGADDTFSAWLLKQE 174 Query: 141 KIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSI----KGSVIAEGTG 195 I ++GG ++ D + D L + + + + L + G + Sbjct: 175 AIVLRGGTLRWRDAQHDAPELALKGIRIAVLNDGIVHRIALQAPANGTLFHGPLDFRARF 234 Query: 196 NFDNKRSAFKIT--------ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 K + + P ++ + AY ID + + Sbjct: 235 VHKALAPIGKPSNWTGDAYLSTGPVDLPTLARYANIRLTAYAGRIDNAIWAHFADGHLYG 294 Query: 248 SGVFSVAGDFSKL----LNLELSAKKSRLSGNFKISDGN---VRISRYKLQSILPNSS 298 +G + G L L +R + I + +SR + P Sbjct: 295 AGG-ELRGYDVALRVRPTQPRLDIPVARFGWDLAIDPKRDYTLHLSRLHAELGQPPLP 351 >gi|332991707|gb|AEF01762.1| hypothetical protein ambt_01025 [Alteromonas sp. SN2] Length = 1123 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 53/388 (13%), Positives = 114/388 (29%), Gaps = 63/388 (16%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFK 67 + F + + + + R + +G+ +++ I I PF Sbjct: 19 IATYFLLAYLFYALILGLVAPMVLESKAPRILSEQLGRNVSID---NIRINPFLLRARVS 75 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125 ID+ + L + F L S + +Y++ P+ F S+G ++ Sbjct: 76 GFSIDEASNDEPFIAFTLLEVDVGFWHTLFSFTPTLEHIYLNAPYARFARVSEGDTSLAS 135 Query: 126 -------------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160 I ++ L K + G I + D +D Sbjct: 136 DQDTTVFNFSDIIDTLAKANNDTTEPEAQEQSEIPHIRLGKFRLSNGHISVADYVTDTQL 195 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 +L+ ++ L+ + ++ +G +N SA T N + A Sbjct: 196 DYPELSFTLNNLD-----TLATSLNVDADQSQVSGADNNSLSAKNSTENSSKEESANHYS 250 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280 L + G +G F V+ L + KI++ Sbjct: 251 FTLATTEGG-SVQFDGQFQL--SPIDIAGSFEVSQIALAPLWPLSDDMI-----DAKITN 302 Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKK 340 G + + L L ++ N F + A+ ++ ++E + Sbjct: 303 GALS---FSLNYHLSENN--------------NDFRFQADNADLSL--SQLVISDKESPR 343 Query: 341 NKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 K +L+ D+ ++ + E Sbjct: 344 IKLAELRVSDMSLDTETQQVNVANFSLE 371 Score = 37.9 bits (86), Expect = 2.6, Method: Composition-based stats. Identities = 24/285 (8%), Positives = 67/285 (23%), Gaps = 34/285 (11%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQA-------TLIVGKKIAVKGGIKIHILPFP 62 L +V V + + E+ + + K+ Sbjct: 543 AILANVQAVSGTIDISQFGLSQLQPYVEQYLNLALEDGSADLSGSFEANSDSKVVFNGQA 602 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 S+ + + + L ++ + + + +D+P+ ++ + Sbjct: 603 SIA--SLTVIDDLKQEPLLQWADLQIKGIKYNSTDSTLSLEKITLDKPYAKLLIAEDKQT 660 Query: 123 NW---------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 N+ + K + + ++ ++ G I D + Sbjct: 661 NFSNIVVEQTASPSISTPETKTQPESKQGAHPSADEEVSELVIRIGEIVFNDGSAYFADN 720 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLK 220 LN + + + G D A N K+ + L Sbjct: 721 SLRPRFASGIESLNGSITKLSSNADTAANVDVKGKIDGYAPVALYGAINPLIKDIFLDLT 780 Query: 221 IQLFPLAYPIIIDLFGNLF---WNEKQPIYSGVFSVAGDFSKLLN 262 + + G ++ + + + N Sbjct: 781 FTVEGAELTSVNPYSGTYMGHFIDKGLLSLDIQYLLEDNQLAGNN 825 >gi|330813749|ref|YP_004357988.1| hypothetical protein SAR11G3_00774 [Candidatus Pelagibacter sp. IMCC9063] gi|327486844|gb|AEA81249.1| hypothetical protein SAR11G3_00774 [Candidatus Pelagibacter sp. IMCC9063] Length = 457 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 54/371 (14%), Positives = 118/371 (31%), Gaps = 16/371 (4%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 + + + L + LV F PL ++ D++ D E + + + I ++G I P Sbjct: 9 KFFLKVATLIVIFLVVIFAAPLALNINDYKSDLENKLSTALNTNIRIEGDIAYTFTLGPK 68 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 + K+I D E + + IE L + L + I + G + Sbjct: 69 LRLKNISFDAGEGNTLDGNIENLYLNVNPFELFKKKFSFKKFSI----------ANGSLS 118 Query: 124 WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD-LNLQISARFLNIISPLSI 182 + + + +KI K IKI++ S+ + +D + L S + + Sbjct: 119 VSDDFFKSYIQNKLQFKKITFKNMDIKIVNNLSEIKFDSNDGVFLFNSQNLVTAKLHGTF 178 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242 ++ + + + K++ ++ + + ++ F N + Sbjct: 179 SNLLYDLKYK-NNKLEISIPEIKLSLEHVRRDLTNNNGFVKIKFSEKLLFPGFRNTYIKS 237 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAK-KSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 + + + K + + + +++ R + Sbjct: 238 DILLANSKLELNNAKISSAIYNGIGKVSLQKNNGLAFINADLKFGRSNFSRASESDWVSF 297 Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361 NK NF N D N D + + D+ + IQ+S +K Sbjct: 298 FNKEIFQIASLMNGNFKINFQNVFLDRNYFDKV-DLDISLNGGDIVLNQIQFSSDK--NS 354 Query: 362 DNSHDKENQEN 372 + QEN Sbjct: 355 LVLSGRFVQEN 365 >gi|323496110|ref|ZP_08101170.1| putative exported protein [Vibrio sinaloensis DSM 21326] gi|323318854|gb|EGA71805.1| putative exported protein [Vibrio sinaloensis DSM 21326] Length = 1289 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 38/368 (10%), Positives = 97/368 (26%), Gaps = 38/368 (10%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTV-PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59 ++R +L G + ++ + + F++ + + G + + Sbjct: 8 LIRFLLWGAVTVLVLLAIAVTALRITLPQLNHFQQPIKSWISDRSGFDLEIAEINGFWRN 67 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN---FY 115 PS+ + +++ E + + + + LL + V D+ I Q L+ Sbjct: 68 THPSISLQGVQVHTPESSDINFSANKIEVELDLIQSLLQQQPVVADLSIHQLELDMTSVE 127 Query: 116 LSSKGVSNWFQRKSTMDMIHNVILEKIHVKG-------GRIKIIDQESDQVYFLSDLNLQ 168 + L+ + ++ I + L L+ Sbjct: 128 TVKNEQDKPVLEPTGSQKDVIQQLDSLLLRQLDDFSLLDSIILFQGIDGADRQLDIAKLR 187 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 + ++ I A+ N ++ F + + L Q + Sbjct: 188 WQNNGRHHLADGEISI------ADSRINSALVKANFVDNGSLTDVSGEFYLSAQNVLVTP 241 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 + L + Q ++G ++ LEL A S Sbjct: 242 WLTEYLKTETGIEKGQLSFNGWLTLRHSKPVNAYLELEA------------------SEL 283 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE-TDFFEEEEKKNKNDDLK 347 + E ++ E + + D E + + + + L Sbjct: 284 IWHEGQTHELFIESGVLELDPTEL-GWQVNAHSLRLRTDETEWPELDMAFDWQPEQWRLN 342 Query: 348 KDDIQYSV 355 + + Sbjct: 343 VSQLDIAA 350 >gi|292490678|ref|YP_003526117.1| hypothetical protein Nhal_0546 [Nitrosococcus halophilus Nc4] gi|291579273|gb|ADE13730.1| conserved hypothetical protein [Nitrosococcus halophilus Nc4] Length = 1286 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 35/289 (12%), Positives = 83/289 (28%), Gaps = 20/289 (6%) Query: 2 LRRVLIGLGFLF---SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58 LR LG L ++ + + + R + +G+++ + G I + Sbjct: 8 LRWFYFSLGILAFCTVSIVGMLWVLWATVGEEP--ATASRWLSTFLGREVQI-GHIDLSW 64 Query: 59 -LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYL 116 P + ++R+ + + L GE + I L Sbjct: 65 RGLEPKLRLTEVRVLDPKTEEQLLSFREAYLGTAPYRSLIEGEWLPRHLTIMGGQLTVER 124 Query: 117 SSKG--------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 +G + L ++ + I+ +D ++ L+L+ Sbjct: 125 KPEGCVRVHGLQSLEAPCPDPPRLPAWLLELTQLTLVDVDIRWLDPALERK----PLSLK 180 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 + +L L K ++ E K + + LK + LA Sbjct: 181 VEELWLKNKGDLHQVEGKATLPEEFGREIAIKAKFTGRSIRGFESKGTLHLKGESLQLAP 240 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 D L++ + + + + ++ K ++ G + Sbjct: 241 WYPHDFLYGLYFTQGRGNLELGLRWSKAALRQAVVKFDWKSLQIVGKAQ 289 >gi|167580677|ref|ZP_02373551.1| hypothetical protein BthaT_21158 [Burkholderia thailandensis TXDOH] Length = 1397 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 84/305 (27%), Gaps = 35/305 (11%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V ++ I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISNLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERHADGSLFVAGVAVPTTKAGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSI---- 185 + E I ++GG ++ D + D L + + + + L + Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAPELALKGIRIAVLNDGIVHRIALQAPANGTLF 224 Query: 186 KGSVIAEGTGNFDNKRSAFKIT--------ANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 G + K + + P ++ + + AY ID Sbjct: 225 HGPLDFRARFVHKALAPIGKPSNWTGDAYLSTGPVDLPTLARYMNIRLTAYAGRIDNAIW 284 Query: 238 LFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKSRLSGNFKISDGN---VRISRYKL 290 + + +G + G L L +R + I + +SR Sbjct: 285 AHFGDGHLYSAGG-ELRGYDVALRVRPTQPRLDIPVARFGWDLAIDPKRDYTLHLSRLHA 343 Query: 291 QSILP 295 + P Sbjct: 344 ELGQP 348 >gi|313500612|gb|ADR61978.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 978 Score = 68.8 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 33/331 (9%), Positives = 91/331 (27%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + L ++ + I +Q ++ +I + PF Sbjct: 1 MYKGLTRAAGAIVALVALYSLLGFLILPGVALRIANQQLAQYATVPAHLE---RIELNPF 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + ++I + G + E L A L + + + + +D+P + G Sbjct: 58 SLELTLWGLQIGEP--GKEQVGFERLYANASLDSLWTKALHLEAVELDKPRNEVLFAKDG 115 Query: 121 VSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168 N + + + + I + G + D + ++NL+ Sbjct: 116 TLNLTGLFKLPASEAKPEEPPSDPFPLRIGSIKLVDGYLHFKDLRPSEPIEFLYDNMNLE 175 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 + + + G + +GT + S + P A Sbjct: 176 LKNLSTLPNDNADMTLVASGPNGGRIDWKGTLSLSPIASEGTLKVTDGKMKLFWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ ++ L S + + +S Sbjct: 236 VPLVLEDGVVSLDTHYKLNLAKQTELLLDKVSVRIAPFAIKAPDGRPLARLASLEVSETT 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 + V + + + + + ++ ++D + Sbjct: 296 IDLVKQQVTVGKVRSEKLETWAALEKDGQLD 326 >gi|313109715|ref|ZP_07795655.1| hypothetical protein PA39016_002040012 [Pseudomonas aeruginosa 39016] gi|310882157|gb|EFQ40751.1| hypothetical protein PA39016_002040012 [Pseudomonas aeruginosa 39016] Length = 1089 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 39/332 (11%), Positives = 95/332 (28%), Gaps = 32/332 (9%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M + + + L LV L I R +Q ++ +I P Sbjct: 1 MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLR-VANQQLAQYATVPARLE---RIEFNP 56 Query: 61 F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 F + +R+ ++++ + L + L ++ + D+ ++ PH K Sbjct: 57 FSLELTLWGLRLGEEKN--PQLAFRRLYANLQLDSLWKRQLHLADVELEGPHTELLFDEK 114 Query: 120 GVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS------ 163 G N + +++I + G + D + S Sbjct: 115 GQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPVDFSFDPLGF 174 Query: 164 DL-NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR-------SAFKITANFPAKNK 215 +L NL ++ L+ G + EG ++ A +P Sbjct: 175 ELHNLSTLPDDGAKMTLLATGPNGGRLDWEGDLTLVPITSRGHLSVKDIQLKAWWPYVRD 234 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG- 274 L ++ ++ L + + + S ++ Sbjct: 235 NAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSINSPQGKPLAKLASLDVAAT 294 Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + Q + ++ ++D + Sbjct: 295 TLDLAKQEVVLGEVRSQGLEAWAAREKDGQLD 326 >gi|83720856|ref|YP_441845.1| hypothetical protein BTH_I1298 [Burkholderia thailandensis E264] gi|257138014|ref|ZP_05586276.1| hypothetical protein BthaA_02169 [Burkholderia thailandensis E264] gi|83654681|gb|ABC38744.1| conserved hypothetical protein TIGR02099 [Burkholderia thailandensis E264] Length = 1397 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 84/305 (27%), Gaps = 35/305 (11%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V ++ I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISNLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERHADGSLFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSI---- 185 + E I ++GG ++ D + D L + + + + L + Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAPELALKGIRIAVLNDGIVHRIALQAPANGTLF 224 Query: 186 KGSVIAEGTGNFDNKRSAFKIT--------ANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 G + K + + P ++ + + AY ID Sbjct: 225 HGPLDFRARFVHKALAPIGKPSNWTGDAYLSTGPVDLPTLARYVNIRLTAYAGRIDNAIW 284 Query: 238 LFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKSRLSGNFKISDGN---VRISRYKL 290 + + +G + G L L +R + I + +SR Sbjct: 285 AHFGDGHLYSAGG-ELRGYDVALRVRPTQPRLDIPVARFGWDLAIDPKRDYTLHLSRLHA 343 Query: 291 QSILP 295 + P Sbjct: 344 ELGQP 348 >gi|239813089|ref|YP_002941999.1| hypothetical protein Vapar_0070 [Variovorax paradoxus S110] gi|239799666|gb|ACS16733.1| conserved hypothetical protein [Variovorax paradoxus S110] Length = 446 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 92/320 (28%), Gaps = 19/320 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAF--TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59 LRR LIG+ + + + G + + G + Sbjct: 5 LRRWLIGIAAVLLLGTGALLWVASTHLPSDEEVAARIAEGFEKRFGVGLKIGG-AHWALW 63 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL---NFYL 116 P P + D+ +Q + ++++ + LL + + ++ I+ L + Sbjct: 64 PSPVLVLSDLATEQPRP----VTLRRITVQLKLRELLRRVVAIDEVEIESLVLPRESVRA 119 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR---IKIIDQESDQVYFLSDLNLQISARF 173 G + + + L + ++ R + ID+ + + + ++ R Sbjct: 120 IRGGSPKPKEDGRIVALPAPWTLAPVPLEKLRWRDLVWIDRRNMALAYDGEITFDAGWRP 179 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL-----KIQLFPLAY 228 + S + + D R+ I +++ Sbjct: 180 RQARIERAGASPPARLRLDRAAGQDRWRTRIDIGGGTANGVAWFETLPPNDLLRVSAELE 239 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 P +D+ G L ++ +G S E+ A L S ++R Sbjct: 240 PRQVDIEGMLQAFGRRSAVAGKAS-GQSMLVAEAEEVGALLRSLRTRTTFSVQPATLTRL 298 Query: 289 KLQSILPNSSTDEDNKTKVS 308 L + + T + Sbjct: 299 DLAKAVTTAGISRGGTTPLD 318 >gi|255010098|ref|ZP_05282224.1| hypothetical protein Bfra3_13240 [Bacteroides fragilis 3_1_12] gi|313147893|ref|ZP_07810086.1| outer membrane assembly protein [Bacteroides fragilis 3_1_12] gi|313136660|gb|EFR54020.1| outer membrane assembly protein [Bacteroides fragilis 3_1_12] Length = 988 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 38/342 (11%), Positives = 107/342 (31%), Gaps = 43/342 (12%) Query: 3 RRVLIGLGFLFS-----VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 +++L G +++ AF + + A + + ++ +++ Sbjct: 6 KKILKISGITLGSVLLVLLVAIAFVINFIVTPKKLTPVVLDAANQTLNAHLDME-SVELT 64 Query: 58 IL---PFPSVFFKDIRI-------DQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMY 106 P + K+ + + + + + I V ++ Sbjct: 65 FFSTFPQFGLKVKNGSLVSRTLNDSNWCKTDSLLSFKECVLTVNPVAYWTENRIVVHNLS 124 Query: 107 IDQPHLNFYLSSKGVSNWFQRKSTMDMIH----------NVILEKIHVKGGRIKIIDQES 156 +D+ + Y G +NW +++ D I + + I +K + D+ + Sbjct: 125 LDEVSVYAYRDKAGQANWEVTRASADTIPEDTVSADFNSEIDIRNIELKHANLIFDDRNT 184 Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA--EGTGNFDNKRSAFKITANFPAKN 214 D + D NL++ +S L + +++ +G + ++ + + Sbjct: 185 DIYSRIDDANLKLRLSLTKGVSTLGLKFDNKNILFWQQGELLVNKIATSLRTDITVDRQT 244 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY--SGVFSVAGDFSKL----------LN 262 LK I +D+ G + + + + + Sbjct: 245 AVWKLK-DTELNVNGIQLDVNGAFRRDTVAKTIGMDLEYGLHAPSMETVLRMIPKAYVKD 303 Query: 263 LELSA-KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 ++SA + +SG + G+ ++ L+ + +S Sbjct: 304 SKVSAKGEVTVSGRVRGVYGDKKLPAVSLKIGIKEASAQYKG 345 >gi|167825683|ref|ZP_02457154.1| hypothetical protein Bpseu9_18572 [Burkholderia pseudomallei 9] Length = 838 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 68/222 (30%), Gaps = 15/222 (6%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + E I ++GG ++ D + D L+ ++I+ I+ +++ + + Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGIVHRIALQAPANGTL 223 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 G +F + + N + P+ P + Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265 >gi|330877221|gb|EGH11370.1| hypothetical protein PSYMP_17171 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 987 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 36/331 (10%), Positives = 91/331 (27%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + L V+V + FI +Q ++ ++ P+ Sbjct: 1 MSKGLKRTLGSLLAVIVLYSLLGFFILPGVALRIANQQLANYSTVPARLE---RLEFNPY 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 58 TLELTLWGLNIGTP--GKEQVAFEKLYANLQIDSLWTKALHLQRVELIKPKAELLFDKQG 115 Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168 N + + + +I + G + D Q LN + Sbjct: 116 KLNLAQLFKLPASEPAKDQPPGKPFPLRIGEIKLADGYVHFQDVRPSQPIEFLYDALNFE 175 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 + + + G + G + S + P A Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLVPITSEGTLKVTDGKMKLWWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L + K S + S + ++ +S + Sbjct: 236 LPLALENGVLNFSTAYKLDLSKETELKLTNLSASVAPFALNSPDGRPLVRLQRLDVSETS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + Q + ++ + D + Sbjct: 296 VDLARQLVTVGKIRSQKLETWAAREADGQLD 326 >gi|148549771|ref|YP_001269873.1| hypothetical protein Pput_4569 [Pseudomonas putida F1] gi|148513829|gb|ABQ80689.1| protein of unknown function DUF748 [Pseudomonas putida F1] Length = 978 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 33/331 (9%), Positives = 92/331 (27%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + L ++ + I +Q ++ +I + PF Sbjct: 1 MYKGLTRAAGAIVALVALYSLLGFLILPGVALRIANQQLAQYATVPAHLE---RIELNPF 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + ++I + G + E L A L + + + + +D+P + G Sbjct: 58 SLELTLWGLQIGEP--GKEQVGFERLYANASLDSLWTKALHLEAVELDKPRNEVLFAKDG 115 Query: 121 VSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168 N + + + + I + G + D + ++NL+ Sbjct: 116 TLNLTGLFKLPASEAKPEEPPSDPFPLRIGSIKLVDGYLHFEDLRPSEPIEFLYDNMNLE 175 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 + + + G + +GT + S + P A Sbjct: 176 LKNLSTLPNDNADMTLVASGPNGGRIDWKGTLSLSPIASEGTLKVTDGKMKLFWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ ++ L S + + +S + Sbjct: 236 VPLVLEDGVVSLDTHYKLNLAKQTELLLDNVSVRIAPFAIKAPDGRPLARLASLEVSETS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 + V + + + + + ++ ++D + Sbjct: 296 IDLVKQQVTVGKVRSEKLETWAALEKDGQLD 326 >gi|218893830|ref|YP_002442699.1| hypothetical protein PLES_51201 [Pseudomonas aeruginosa LESB58] gi|218774058|emb|CAW29874.1| hypothetical protein PLES_51201 [Pseudomonas aeruginosa LESB58] Length = 1090 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 38/332 (11%), Positives = 94/332 (28%), Gaps = 32/332 (9%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M + + + L LV L I R +Q ++ +I P Sbjct: 1 MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLR-VANQQLAQYATVPARLE---RIEFNP 56 Query: 61 F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 F + +R+ +++ + L + L ++ + D+ ++ PH K Sbjct: 57 FSLELTLWGLRLGDEKN--PQLAFRRLYANLQLDSLWKRQLHLADVELEGPHTELLFDEK 114 Query: 120 GVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS------ 163 G N + +++I + G + D + S Sbjct: 115 GQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPVDFSFDPLGF 174 Query: 164 DL-NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR-------SAFKITANFPAKNK 215 +L NL ++ ++ G + EG ++ A +P Sbjct: 175 ELHNLSTLPDDGAKMTLVATGPNGGRLDWEGDLTLMPITSRGHLSVKDIQLKAWWPYVRD 234 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG- 274 L ++ ++ L + + + S ++ Sbjct: 235 NAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSINSPQGKPLAKLASLDVAAT 294 Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + Q + ++ ++D + Sbjct: 295 TLDLAKQEVVLGEVRSQGLEAWAAREKDGQLD 326 >gi|254787697|ref|YP_003075126.1| hypothetical protein TERTU_3829 [Teredinibacter turnerae T7901] gi|237685767|gb|ACR13031.1| conserved hypothetical protein [Teredinibacter turnerae T7901] Length = 1600 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 102/349 (29%), Gaps = 39/349 (11%) Query: 2 LRRVLIGL-GFLFSVVLVGAFTVPL----FIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 +RR++ G LF++V+ A V L F D+R+D R +G KI + G + Sbjct: 1 MRRLVKRFWGTLFTLVIATAVLVQLGREAFPLLNDYRDDISRLIGDQLGVKIHI-GELAA 59 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNF 114 P V D+ +D +D +I SM + L ++ + Sbjct: 60 TWAGLRPKVDLIDVSVDSLDD-QPIFRIREASMELSLVESLAKRQVAWRQLAFKDLQTTL 118 Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILE----------KIHVKGGRIKIIDQESDQ-VYFLS 163 G K+T+ ++ ++ + + + + Q + Sbjct: 119 VQQDTGPWQIKNLKTTVKSDRKFRIDDPLDIFLVGRRVEIDNAQFALEFRTGHQSSLQIP 178 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 ++ L+ F I + +++ + + F + + Sbjct: 179 NIMLENDKDFHRIRASAAVEGRQHFTLISEGIGDPRDPDNFDAKGYVSLNQFPMEQVLAA 238 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 F + G+ W E G ++ +LSGN + + Sbjct: 239 FAGDWWRE---QGSHQWAEG-HRLDLQLWYQGSSTRGY---------KLSGNLRADGLPL 285 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETD 332 + S+ + D S ++ ++ Sbjct: 286 AVPETV--SLPTGTQADITG----SWTPKDGWRLMLQHLLIDWPEGQSP 328 >gi|167035694|ref|YP_001670925.1| hypothetical protein PputGB1_4703 [Pseudomonas putida GB-1] gi|166862182|gb|ABZ00590.1| protein of unknown function DUF748 [Pseudomonas putida GB-1] Length = 978 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 35/331 (10%), Positives = 96/331 (29%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + L ++ + I +Q ++ +I + PF Sbjct: 1 MYKGLTRATGAIVALVALYSLLGFLILPGVALRIANQQLAQYATVPAHLE---RIELNPF 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + ++I + G + E L L + + + + +D+P + G Sbjct: 58 SLELTLWGLQIGEP--GKEQVAFERLYANLSLDSLWTKALHLEAVELDKPRNEVLFAKDG 115 Query: 121 VSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166 N + + + I + G + DQ + +L Sbjct: 116 ALNLTGLFKLPASEAKPDEPPSDPFPLRIGSIKLVDGYLHFEDQRPSEPIEFLYDNMNLE 175 Query: 167 LQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 L+ + N + +S+ ++ G + +GT + S + P A Sbjct: 176 LKNLSTLPNDNADMSLVALGPNGGRIDWKGTLSLAPIASEGTLKVTEGKMKAFWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ ++ L + S + + +S + Sbjct: 236 VPLVLEDGVISLDTHYKLNLAQQTELQLDNASVRIAPFAIKAPDGRPLARLASLEVSETS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 + V + + + + + ++ ++D + Sbjct: 296 VDLVKQLVTVGKIRSEKLETWAALEKDGQLD 326 >gi|325286836|ref|YP_004262626.1| putative outer membrane protein [Cellulophaga lytica DSM 7489] gi|324322290|gb|ADY29755.1| putative outer membrane protein [Cellulophaga lytica DSM 7489] Length = 912 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 51/405 (12%), Positives = 110/405 (27%), Gaps = 50/405 (12%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK----- 55 M +++L +G + +++V P F + E+ V I Sbjct: 1 MKKKILKIIGVVVLLIVVLLIAAPFF-----LQGKIEKIIKDKVNNNIEATLDFASADLS 55 Query: 56 -IHILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSG---EIRVFDMYIDQ 109 P V ++ + G + +++ L I + + +D Sbjct: 56 LFSSFPNAKVTINELVLTNNAPFKGDTLFASKEIALDMAITELFKDSSEAIGIKSLAVDG 115 Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMI-----------HNVILEKIHVKGGRIKIIDQESDQ 158 LN ++ ++N+ K + +E + +I +DQ S Sbjct: 116 AALNIIVNKDSIANYDIAKKDTAEPVVSETEEEGSSFTLAMESYKITNSKIVYVDQTSGM 175 Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217 L+DL + S L + S GT + + K Sbjct: 176 ALALTDLQHSGTGDLSLEKSELDTKTNALVSFGMGGTNYLNRNKVGLDALIGIDLKESKF 235 Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 S ++ L + + G + NE + F K + + ++ Sbjct: 236 SF-LKNEALVNQLPLVFDGFVKINEDNQEVNINFKTLSSEFKNFLALVPEEYTK------ 288 Query: 278 ISDGNVRISRYKLQSILPNSSTDEDNKTK--VSQDEENLLNFSENGAESMHDLNETDFFE 335 ++++ + K V + + N + + Sbjct: 289 -----------SIENVKTTGKFTVEGKLDGIVDETHIPKFSVKLNSDNASFKYPDLPKAV 337 Query: 336 EEEKKNKNDDLKKDDIQYSVN--KKEEKDNSHDKENQENFSGDKM 378 N D ++ + KK D+ N + D M Sbjct: 338 TNIFINAAIDNTTGLVEDTSVDIKKLAFAIDQDRFNLNSQITDLM 382 >gi|167817273|ref|ZP_02448953.1| hypothetical protein Bpse9_19189 [Burkholderia pseudomallei 91] Length = 843 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 68/222 (30%), Gaps = 15/222 (6%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + E I ++GG ++ D + D L+ ++I+ I+ +++ + + Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGIVHRIALQAPANGTL 223 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 G +F + + N + P+ P + Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265 >gi|107103834|ref|ZP_01367752.1| hypothetical protein PaerPA_01004905 [Pseudomonas aeruginosa PACS2] Length = 1088 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 97/335 (28%), Gaps = 38/335 (11%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M + + + L LV L I R +Q ++ +I P Sbjct: 1 MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLR-VANQQLAQYATVPARLE---RIEFNP 56 Query: 61 F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 F + +R+ ++++ + L + L ++ + D+ ++ PH K Sbjct: 57 FSLELTLWGLRLGEEKN--PQLAFRRLYANLQLDSLWKRQLHLADVELEGPHTELLFDEK 114 Query: 120 GVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 G N + +++I + G + D + D + Sbjct: 115 GQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPV---DFSFDP 171 Query: 170 SARFLNIISPLSIDSIKGSVIA----EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 L+ +S L D K +++A G +++ + IT+ K I LK Sbjct: 172 LGFELHNLSTLPDDGAKMTLVATGPNGGRLDWEGDLTLVPITSRGHLSVKDIQLKAWWPY 231 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN---------- 275 + + L + K + G Sbjct: 232 VRDNAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSINSPQGKPLAKLASLDV 291 Query: 276 ----FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + Q + ++ ++D + Sbjct: 292 AATTLDLAKQEVVLGEVRSQGLEAWAAREKDGQLD 326 >gi|331016657|gb|EGH96713.1| hypothetical protein PLA106_11510 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 987 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 36/386 (9%), Positives = 102/386 (26%), Gaps = 45/386 (11%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + L V+V + FI +Q ++ ++ P+ Sbjct: 1 MSKGLKRTLGSLLAVIVLYSLLGFFILPGVALRIANQQLANYSTVPAKLE---RLEFNPY 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 58 TLELTLWGLNIGTP--GKEQVAFEKLYANLQIDSLWTKALHLQRVELIKPKAELLFDKQG 115 Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168 N + + + +I + G + D + LN + Sbjct: 116 KLNLAQLFKLPASEPAKDQPPSKPFPLRIGEIKLADGYVHFQDVRPSEPIEFLYDALNFE 175 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 + + + G + G + S + P A Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLVPITSEGTLKVTDGKMKLWWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L + K S + + + ++ +S + Sbjct: 236 LPLALENGVLNFSTAYKLDLSKETELKLTNLSASVAPFALNTPDGRPLVRLQRLDVSETS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335 ++ V + + + Q++ ++ + D + + + + Sbjct: 296 VDLARQLVSVGKIRSQTLETWAAREVDGQ--------------LDWQKLFANPPGKPAAP 341 Query: 336 EEEKKNKNDDLKKDDIQYSVNKKEEK 361 ++ ++ Q S + Sbjct: 342 KKPAVDEKAAEPAPAPQTSAQASTQP 367 >gi|291532191|emb|CBL05304.1| Uncharacterized protein conserved in bacteria [Megamonas hypermegale ART12/1] Length = 830 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 54/378 (14%), Positives = 116/378 (30%), Gaps = 26/378 (6%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFRED----FERQATLIVGKKIAVKGGIKI 56 M ++ I +G ++ + L+I+ F+++ +Q I+G KI + + Sbjct: 1 MQKKSKIIVGASVFIIFCISLMTFLWINSQSFKQETANLISKQVENILGTKININ---SL 57 Query: 57 HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRV--FDMYIDQPHLNF 114 +I+ S D+ I KE+ +K + + +F +L ++ + P +N Sbjct: 58 YIVSTNSAAIDDVEIYDKENEL-IAKADKVVFTIDFWQILRQSPLAGLSEVDVINPEVNI 116 Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS-ARF 173 S G N + V+ G+ K+ + + + +NL+ A Sbjct: 117 IQRSDGSWNVEDLIDKDSDTPVDFKGIVKVENGQSKL--RFEGKQLSIDKINLEADCADL 174 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL----KIQLFPLAYP 229 I S++ V +G + ++ +I A K + + + Sbjct: 175 TAINLDGSLNHEDALVEFDGVVG-EVIKTNLEIKAQDLDILKYLPFIPEEYLANVNIKQG 233 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 I + N + + F L + G +++ N+++ Sbjct: 234 FINKANITISGNLEN---QYTLDGSVSFVDGACEVLGQNVEDIRGIILLNNKNIQL---- 286 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF-FEEEEKKNKNDDLKK 348 S + E L +L F E Sbjct: 287 FVSGSAQGQKVAVHGNIEDYMTEPRLRLIAESKSFRPELFIEGIPFNGEVSFVSAIYGTL 346 Query: 349 DDIQYSVNKKEEKDNSHD 366 DDI+ + +D Sbjct: 347 DDIRIGAQVNSKLGYIYD 364 >gi|170723438|ref|YP_001751126.1| hypothetical protein PputW619_4277 [Pseudomonas putida W619] gi|169761441|gb|ACA74757.1| conserved hypothetical protein [Pseudomonas putida W619] Length = 1269 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 99/297 (33%), Gaps = 19/297 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60 R +G+ L +V++ ++ + ++R D E +A +G + V G ++ Sbjct: 13 RWGLGICALLAVLVALYVSLGRELVPLVAEYRADLESKAEQALGLPVHV-GALEGRWSGL 71 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSK 119 P + +D+++ + G+ +++ + + + L+ E+R+ + + L + + Sbjct: 72 APVLRVRDLQLGE---GASALRLDDVKLVPDLWASLTAREVRLARIQLAGLQLILRENEQ 128 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 G D + ++ GRI D + + D + Sbjct: 129 GGWALEGLPKKDDAPLDPAEVLQRLQQLGRIDAFDSQVTLQPWQRD-----PLTLTYVSF 183 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235 L + + ++ T D + A + + ++ + L + + Sbjct: 184 GLQAGASRQALDLRATLP-DGQPLALNLRSRVTPQAWRDGKAEAYLSLPQSDWARWLPPR 242 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 W + G F V +L + +L G + V + L + Sbjct: 243 LLGQWQAQALRAGGEFWVDWGEGRLQQAVVRLNAPQLRGAY-AQRQAVTLDNLALSA 298 >gi|167740058|ref|ZP_02412832.1| hypothetical protein Bpse14_18498 [Burkholderia pseudomallei 14] Length = 853 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 83/305 (27%), Gaps = 35/305 (11%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSI---- 185 + E I ++GG ++ D + D L+ + + + L L + Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAPELALTGIRIAVLNDGLVHRIALQAPANGTLF 224 Query: 186 KGSVIAEGTGNFDNKRSAFKIT--------ANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 G + K + + P ++ + AY ID Sbjct: 225 HGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLARYANIRVTAYAGRIDNAIW 284 Query: 238 LFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKSRLSGNFKISDGN---VRISRYKL 290 + + +G + G L L +R + I + +SR Sbjct: 285 AHFGDGHLYRAGG-ELRGYDVALRVRPTQPRLDIPVARFGWDVAIDPKRDYTLHLSRLHA 343 Query: 291 QSILP 295 + P Sbjct: 344 ELGQP 348 >gi|167721087|ref|ZP_02404323.1| hypothetical protein BpseD_18911 [Burkholderia pseudomallei DM98] Length = 857 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 83/305 (27%), Gaps = 35/305 (11%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSI---- 185 + E I ++GG ++ D + D L+ + + + L L + Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAPELALTGIRIAVLNDGLVHRIALQAPANGTLF 224 Query: 186 KGSVIAEGTGNFDNKRSAFKIT--------ANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 G + K + + P ++ + AY ID Sbjct: 225 HGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLARYANIRVTAYAGRIDNAIW 284 Query: 238 LFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKSRLSGNFKISDGN---VRISRYKL 290 + + +G + G L L +R + I + +SR Sbjct: 285 AHFGDGHLYRAGG-ELRGYDVALRVRPTQPRLDIPVARFGWDVAIDPKRDYTLHLSRLHA 343 Query: 291 QSILP 295 + P Sbjct: 344 ELGQP 348 >gi|254238528|ref|ZP_04931851.1| hypothetical protein PACG_04680 [Pseudomonas aeruginosa C3719] gi|126170459|gb|EAZ55970.1| hypothetical protein PACG_04680 [Pseudomonas aeruginosa C3719] Length = 1090 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 97/335 (28%), Gaps = 38/335 (11%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M + + + L LV L I R +Q ++ +I P Sbjct: 1 MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLR-VANQQLAQYATVPAHLE---RIEFNP 56 Query: 61 F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 F + +R+ ++++ + L + L ++ + D+ ++ PH K Sbjct: 57 FSLELTLWGLRLGEEKN--PQLAFRRLYANLQLDSLWKRQLHLADVELEGPHTELLFDEK 114 Query: 120 GVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 G N + +++I + G + D + D + Sbjct: 115 GQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPV---DFSFDP 171 Query: 170 SARFLNIISPLSIDSIKGSVIA----EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 L+ +S L D K +++A G +++ + IT+ K I LK Sbjct: 172 LGFELHNLSTLPDDGAKMTLVATGPNGGRLDWEGDLTLVPITSRGHLSVKDIQLKAWWPY 231 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN---------- 275 + + L + K + G Sbjct: 232 VRDNAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSINSPQGKPLAKLASLDV 291 Query: 276 ----FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + Q + ++ ++D + Sbjct: 292 AATTLDLAKQEVVLGEVRSQGLEAWAAREKDGQLD 326 >gi|213966640|ref|ZP_03394791.1| hypothetical protein PSPTOT1_0398 [Pseudomonas syringae pv. tomato T1] gi|213928490|gb|EEB62034.1| hypothetical protein PSPTOT1_0398 [Pseudomonas syringae pv. tomato T1] Length = 1002 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 34/331 (10%), Positives = 90/331 (27%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + L V+V + FI +Q ++ ++ P+ Sbjct: 16 MSKGLKRTLGSLLAVIVLYSLLGFFILPGVALRIANQQLANYSTVPARLE---RLEFNPY 72 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 73 TLELTLWGLNIGTP--GKEQVAFEKLYANLQIDSLWTKALHLQRVELIKPKAELLFDKQG 130 Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168 N + + + +I + G + D + LN + Sbjct: 131 KLNLAQLFRLPASEPAKDQPPSKPFPLRIGEIKLADGYVHFQDVRPSEPIEFLYDALNFE 190 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 + + + G + G + S + P A Sbjct: 191 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLVPITSEGTLKVTDGKMKLWWPYVRDA 250 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L + K S + + + + +S + Sbjct: 251 LPLALENGVLNFSTAYKLDLSKETELKLTNLSASVAPFALNTPDGRPLVRLQHLDVSETS 310 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + Q + ++ + D + Sbjct: 311 VDLARQLVSVGKIRSQKLETWAAREADGQLD 341 >gi|116052882|ref|YP_793199.1| hypothetical protein PA14_62650 [Pseudomonas aeruginosa UCBPP-PA14] gi|115588103|gb|ABJ14118.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 1088 Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 96/335 (28%), Gaps = 38/335 (11%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M + + + L LV L I R +Q ++ +I P Sbjct: 1 MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLR-VANQQLAQYATVPARLE---RIEFNP 56 Query: 61 F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 F + +R+ +++ + L + L ++ + D+ ++ PH K Sbjct: 57 FSLELTLWGLRLGDEKN--PQLAFRRLYANLQLDSLWKRQLHLADVELEGPHTELLFDEK 114 Query: 120 GVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 G N + +++I + G + D + D + Sbjct: 115 GQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPV---DFSFDP 171 Query: 170 SARFLNIISPLSIDSIKGSVIA----EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 L+ +S L D K +++A G +++ + IT+ K I LK Sbjct: 172 LGFELHNLSTLPDDGAKMTLVATGPNGGRLDWEGDLTLVPITSRGHLSVKDIQLKAWWPY 231 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN---------- 275 + + L + K + G Sbjct: 232 VRDNAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSINSPQGKPLAKLASLDV 291 Query: 276 ----FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + Q + ++ ++D + Sbjct: 292 AATTLDLAKQEVVLGEVRSQGLEAWAAREKDGQLD 326 >gi|262383286|ref|ZP_06076422.1| outer membrane assembly protein [Bacteroides sp. 2_1_33B] gi|262294184|gb|EEY82116.1| outer membrane assembly protein [Bacteroides sp. 2_1_33B] Length = 1097 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 42/351 (11%), Positives = 104/351 (29%), Gaps = 49/351 (13%) Query: 1 MLRR-------VLIGLGFLFSVVLVGAFTVPL-FIDWTDFREDFERQATLIVGKKIAVKG 52 M++ V + +G F + L+G + + + + + + Sbjct: 1 MMKWKKILLVVVSVLVGIFFILPLIGVGILKWAVLPPEKLTPLVVEKTNEFIEAHLECE- 59 Query: 53 GIKIHIL---PFPSVFFKDIRIDQKE-------------DGSFESKIEGLSMRAEFLPLL 96 +++ P+ V + R+ + + + L Sbjct: 60 RVELTYFETYPYLGVKLTNGRLISHQAEDSIGHQEDLMIPSDSLLSFKKAIVVFNPTDYL 119 Query: 97 -SGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGG 147 SG++ + + +D Y++ +G +NW +S MD + + L+++H+ G Sbjct: 120 FSGKVTIPRVIMDSIRFYGYVNEEGKANWEIYQSEMDSVDESSSSPLPKIDLQQVHITNG 179 Query: 148 RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207 D++ D + L I + L +++ S++ + A + Sbjct: 180 HFVYDDRQQDLYTAIDGFFLHIDGLLTQRGNKLDVETGSSSIVFRSPSYSLANKLALRFK 239 Query: 208 ANFPAKNKAISL---KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL--- 261 + + +L P D F + F + L Sbjct: 240 GRLLLADGLRRIGLRDAELLVNNLPFTADGFMVPATEDNPSRIDMTFGLKVSDMNDLLHF 299 Query: 262 ---------NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 + L+ + L G+ + G+ + L + + S Sbjct: 300 IPDEYFKDRDKTLAEGRIILEGDIRGELGDSIVPTVNLCCKIEDGSYHVKG 350 >gi|167847172|ref|ZP_02472680.1| hypothetical protein BpseB_17997 [Burkholderia pseudomallei B7210] Length = 877 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 83/305 (27%), Gaps = 35/305 (11%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSI---- 185 + E I ++GG ++ D + D L+ + + + L L + Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAPELALTGIRIAVLNDGLVHRIALQAPANGTLF 224 Query: 186 KGSVIAEGTGNFDNKRSAFKIT--------ANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 G + K + + P ++ + AY ID Sbjct: 225 HGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLARYANIRVTAYAGRIDNAIW 284 Query: 238 LFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKSRLSGNFKISDGN---VRISRYKL 290 + + +G + G L L +R + I + +SR Sbjct: 285 AHFGDGHLYRAGG-ELRGYDVALRVRPTQPRLDIPVARFGWDVAIDPKRDYTLHLSRLHA 343 Query: 291 QSILP 295 + P Sbjct: 344 ELGQP 348 >gi|224023843|ref|ZP_03642209.1| hypothetical protein BACCOPRO_00560 [Bacteroides coprophilus DSM 18228] gi|224017065|gb|EEF75077.1| hypothetical protein BACCOPRO_00560 [Bacteroides coprophilus DSM 18228] Length = 1000 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 48/415 (11%), Positives = 128/415 (30%), Gaps = 52/415 (12%) Query: 1 MLRRVL-------IGLGFLFSVVLVGAFTVPLF-IDWTDFREDFERQATLIVGKKIAVKG 52 M R++L I +G L V L F + R A + ++ ++ Sbjct: 1 MNRKILKPIKISAIAVGALIVVFLAVVTIAVNFVFTPSRLTPVVLRVANQSMSARLDME- 59 Query: 53 GIKIHIL---PFPSVFFKDIRIDQK-------EDGSFESKIEGLSMRAEFLPLLS-GEIR 101 +++ P + D + K E + + + L +I Sbjct: 60 SVELTFFSTFPRFGLKLTDGSLVSKAIRDTLWERTDSLVSFKKCVVVINPIDYLKDKKIS 119 Query: 102 VFDMYIDQPHLNFYLSSKGVSNW-----------FQRKSTMDMIHNVILEKIHVKGGRIK 150 ++ + ++ + + + +GV+NW I + + ++ K + Sbjct: 120 LYYLGLEDASVYAFKNKEGVANWDIVAADTTAVEDTAGQERPDISEININRVAFKRANVV 179 Query: 151 IIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF 210 D+++ ++D +L + A S L++D ++I G +R A ++ N Sbjct: 180 FDDRDTRLYARVTDADLNLKASLRKGHSDLALDFKNRNIIFWQDGRLLLRRMATELKTNL 239 Query: 211 PAKNKAISLKI-QLFPLAYPIIIDLFGNLFWN--EKQPIYSGVFSVAGDFSKLLNLELS- 266 + +L + + +D+ G + + + + + + + Sbjct: 240 DLNRQTRTLTLKDTRLSVNGVALDVDGTIRRDTVNHAAAVDLTYGLHAPSLETVLRMIPR 299 Query: 267 ----------AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN------KTKVSQD 310 + +++G K G ++ L+ + ++S + Sbjct: 300 SIMKDTKVAAKGEVKVAGTLKGLYGKQQMPEITLKVQVNDASAKYEGLPYGIDLLSADFA 359 Query: 311 EENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSH 365 L + + + + + + + D + N K D + Sbjct: 360 GFIDL-MKKKPSYADLKIFRFQGAHTDILADAKIEDLLGDPDITFNTKSSIDLTS 413 >gi|254244363|ref|ZP_04937685.1| hypothetical protein PA2G_05217 [Pseudomonas aeruginosa 2192] gi|126197741|gb|EAZ61804.1| hypothetical protein PA2G_05217 [Pseudomonas aeruginosa 2192] Length = 1088 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 97/335 (28%), Gaps = 38/335 (11%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M + + + L LV L I R +Q ++ +I P Sbjct: 1 MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLR-VANQQLAQYATVPARLE---RIEFNP 56 Query: 61 F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 F + +R+ ++++ + L + L ++ + D+ ++ PH K Sbjct: 57 FSLELTLWGLRLGEEKN--PQLAFRRLYANLQLDSLWKRQLHLADVELEGPHTELLFDEK 114 Query: 120 GVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 G N + +++I + G + D + D + Sbjct: 115 GQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPV---DFSFDP 171 Query: 170 SARFLNIISPLSIDSIKGSVIA----EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 L+ +S L D K +++A G +++ + IT+ K I LK Sbjct: 172 LGFELHNLSTLPDDGAKMTLVATGPNGGRLDWEGDLTLVPITSRGHLSVKDIQLKAWWPY 231 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN---------- 275 + + L + K + G Sbjct: 232 VRDNAPLVLENGVVSLSSDYRLDLSKDTRLLLDKAALKLADFSINSPQGKPLAKLASLDV 291 Query: 276 ----FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + Q + ++ ++D + Sbjct: 292 AATTLDLAKQEVVLGEVRSQGLEAWAAREKDGQLD 326 >gi|221639393|ref|YP_002525655.1| hypothetical protein RSKD131_1294 [Rhodobacter sphaeroides KD131] gi|221160174|gb|ACM01154.1| Hypothetical Protein RSKD131_1294 [Rhodobacter sphaeroides KD131] Length = 1070 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 28/335 (8%), Positives = 81/335 (24%), Gaps = 33/335 (9%) Query: 5 VLIGLGFLFSVVLVGAFTVP--LFIDWTDFREDFERQATLIVG--KKIAVKG-GIKIHIL 59 +L+ L + +V + E + + +++ G + + Sbjct: 1 MLLSLALVAAVAGFATLAFTGRPLPLPGWAVTEAETRINRALEPALSVSLGGLVLTVEPN 60 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + D+R+ Q + + + + L G + + + ++ + Sbjct: 61 WIPRLRLDDVRLRQADG-RTLVTLPEARVVFDRGAALRGALHPKTITLSGARISLRRLAD 119 Query: 120 GVSNWFQRKST------------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161 G ++ + L +I +G + + D+ + + + Sbjct: 120 GRFDFAMGEQGGTFRLASYAELRETVDRLFAQPVLADLRRIEAEGTTLTLDDRRAGRTWQ 179 Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK- 220 D L + + + + A + A A ++ Sbjct: 180 AGDGRLTLVNGPDRRALEIGLTLLNSKGRAPAQALVTFVTTPGSPEARISATVDHVAAAD 239 Query: 221 --------IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 L L + L + + + Sbjct: 240 IAAQAAPVAWLEVLDAALSGRFSAALDGEGRLTRLEAGLDSGEGALQPRPETRPIAFDKA 299 Query: 273 SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 F G R++ +L+ + + Sbjct: 300 GLAFAYDPGRERMNLTRLEVQGRSIRLSAQGHAYL 334 >gi|288942224|ref|YP_003444464.1| hypothetical protein Alvin_2522 [Allochromatium vinosum DSM 180] gi|288897596|gb|ADC63432.1| membrane protein-like protein [Allochromatium vinosum DSM 180] Length = 1203 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 18/204 (8%), Positives = 59/204 (28%), Gaps = 19/204 (9%) Query: 29 WTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGSFESKIEGLS 87 +R +G ++++ G +++ + P + + + + + G+ ++ L Sbjct: 29 PDSYRAPLAEWLAERLGYRVSIAG-LRLGLAGVRPRLNLEQVELSDPDTGAPALSLKALQ 87 Query: 88 MRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV-----ILEK 141 + + + ++ + + HL +++G V + Sbjct: 88 LDLDLWDSVRTRSPQIEALTLVGAHLTVERTAEGRFRLQGLDGLGGGDPQVLEGFWREGR 147 Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201 + V I + D + R + L+ + + Sbjct: 148 LDVVESEILLRDAVRESRLL----------RLTGVHLTLANTGEQHWLDLRAR-PVPPDP 196 Query: 202 SAFKITANFPAKNKAISLKIQLFP 225 A + P+ + ++L Sbjct: 197 LATRARTPDPSDGGPVRPSLRLSA 220 >gi|153003051|ref|YP_001377376.1| hypothetical protein Anae109_0174 [Anaeromyxobacter sp. Fw109-5] gi|152026624|gb|ABS24392.1| protein of unknown function DUF490 [Anaeromyxobacter sp. Fw109-5] Length = 1505 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 45/347 (12%), Positives = 98/347 (28%), Gaps = 38/347 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQA----TLIVGKKIAVKGGIKIH 57 LR GL L ++V V V LF R+ + + + G + Sbjct: 8 LRVAGWGLLGLVALVGVLLSAVTLFATSKAGGPIVAREVIRLVDDALAGRFELAG---VA 64 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 + P +V + +R+ ++ ++ + + L + +D P + Sbjct: 65 VRPDGTVEVRGLRVFDPDEHL-VLAVDRARVAIDVTQ-LRRRTVGAAIALDGPSVLLEEE 122 Query: 118 SKGVSNW---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 G + R V + + ++GG + +D + Sbjct: 123 EDGGLSLVRAFSAAHPGPPRPEGPRTPPRGPGLEVRVSALAIRGGDVWWVDADGATRLEA 182 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLKI 221 DL+L + + + + G + + + A+ L Sbjct: 183 RDLDLDARGAWQRSAADVE-------LRLRGMLDLPVAAPLSLDVVASREGDRVRAPL-- 233 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGV-FSVAGDFSKLLNLELSAKKSRLSGNFKISD 280 L + L G+L + V ++ + EL + + + SD Sbjct: 234 -LRASVGGTAVSLIGHLDVVTLAGRAAITRLDVDRAQARTVVPELGGGEDAAATVYAESD 292 Query: 281 GNVRISRYKLQ--SILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 G + + +++ P D + D L F Sbjct: 293 GAIATAAARVEPRDGGPALGRRADAAVALRLDGARALGFDLALERLD 339 >gi|34541675|ref|NP_906154.1| hypothetical protein PG2094 [Porphyromonas gingivalis W83] gi|34397993|gb|AAQ67053.1| conserved domain protein [Porphyromonas gingivalis W83] Length = 1515 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 42/341 (12%), Positives = 89/341 (26%), Gaps = 23/341 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFR----EDFERQATLIVGKKIAVKGGIKIH 57 +RR + + +V L + + + + + +G + + G I I Sbjct: 31 MRRSKWIVVAVLTVAFCLLILPNLILQIPSVKRSVAGRVQTELSKALGTHVRI-GHISIG 89 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL- 116 + DI I + E L+ + LPLL G + + + L+ Y Sbjct: 90 WWRQ--MEIDDIVIFDRA-RRPAVSAERLTGGLDLLPLLKGRLSFSSARLFKGELDVYRS 146 Query: 117 SSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 N + + + I ++ R+ Q L L+L Sbjct: 147 RPDTALNIQFLLDALKSKNPEEPSRLRLNINTILLRNCRLSASGLYKTQSDTLGLLDLNA 206 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 R S ++ E D K ++ L I L Sbjct: 207 KVRLFQADSTGLKAQLRHLSFLEKNTGLDLKELHADVSLRGD-TLGVARLHISLPNSHIG 265 Query: 230 IIID---LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS---GNFKISDGNV 283 ++ L + + K L L L+ ++ G Sbjct: 266 MVSGYCVLSPENSALPAIRVTDLGGRIRPSDLKGLLPALDTMDDILNLSVPELTVASGEA 325 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 + + + ++ + E + + + Sbjct: 326 VLPEISMNYGDELTLQAGIGLAEIGKKERMHVRLRLDELKL 366 >gi|167895754|ref|ZP_02483156.1| hypothetical protein Bpse7_18581 [Burkholderia pseudomallei 7894] Length = 863 Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 68/222 (30%), Gaps = 15/222 (6%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + E I ++GG ++ D + D L+ ++I+ I+ +++ + + Sbjct: 165 TFSTWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGIVHRIALQAPANGTL 223 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 G +F + + N + P+ P + Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265 >gi|37527913|ref|NP_931258.1| hypothetical protein plu4066 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787349|emb|CAE16438.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 1264 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 99/323 (30%), Gaps = 21/323 (6%) Query: 2 LRRV---LIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56 +RR+ L+ + +++ + FI D+R + I+G I G I Sbjct: 1 MRRLPGVLLATAAIVIIIVALLVSGLRFILPHINDYRPQLFAKIESIIGVPID-AGYIAG 59 Query: 57 HILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 F P +DI + K + +++ + LL D+ Q +++ Sbjct: 60 EWESFGPVFELRDISVKTANAD---VKAKKITVALDIWLSLLRMRWNFRDLTFYQLQVDY 116 Query: 115 YLS--SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQ 168 Y + N F + + + +++ R + ++ L+ LN Sbjct: 117 YQPLFNDQNGNMFSQSDLFSDLFLEQFDHFNLQDSRFTFLTPSGERADLLLPQLTWLNKD 176 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTG-NFDNKRSAFKITANFPAKNKAISLK--IQLFP 225 R IS SI++ G + + + + I + L +Q Sbjct: 177 NRHRAQGKISLSSINNQHGDIQVKFDLHDTNGVLDNGTIYLQADNVDVHPWLSHWLQDNT 236 Query: 226 LAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 L + + + K+ N + S L + DG Sbjct: 237 GLKDAEFSLSSWIMLKDGRIDGGQLQLRQGKANWKVANKSHNLSVSDLVLRMRRQDGGWL 296 Query: 285 ISRYKLQSILPNSSTDEDNKTKV 307 +L +++ + K V Sbjct: 297 FDAPELANLITDGQQWPSGKVSV 319 >gi|189499345|ref|YP_001958815.1| hypothetical protein Cphamn1_0367 [Chlorobium phaeobacteroides BS1] gi|189494786|gb|ACE03334.1| conserved hypothetical protein [Chlorobium phaeobacteroides BS1] Length = 1494 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 45/418 (10%), Positives = 123/418 (29%), Gaps = 64/418 (15%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDF----REDFERQATLIVGKKIAVKGGIKIHI 58 + +L + +++L+ A V + ++ + K+ ++ ++++ Sbjct: 6 KYILGIAVSISALILILAVIVAIILNSGSLDLMAKNRLIDFFNSEFQGKLNIE---EVNL 62 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG--EIRVFDMYIDQPHLNFYL 116 ++ ++ ++ + E E +++ FL LLS I + + D ++ Sbjct: 63 QFPSTIILHQTQLYRENSETPEFTAEKVTLNLNFLRLLSNFSSITIRSLKADSFFIHLER 122 Query: 117 SSKGVSNWF--QRKSTMDMIHNVILEKI-----HVKGGRIKIID----QESDQVYFLSDL 165 G +N LE+ + G + +D + ++ ++D+ Sbjct: 123 YPDGSTNIERIFAPRKEQDPDAPGLERFLCNRIDLTNGSAEYLDFQNKEADPELLTIADI 182 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 + + + G + K NF + + L + Sbjct: 183 SFTGNKLRYS------------PENFSGIIRNIGFQLPQK---NFTLRKGSAKLSVTNKR 227 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L + G +Y F+V + + A + +G+ + ++ Sbjct: 228 LEILDLKAKTGKSSAELSLGLY--EFNVFSQENPDRHSSSPAMLNLKAGSIHTDELSIFF 285 Query: 286 SRYKLQSILPNSSTDEDNKTK------------------------VSQDEENLLNFSENG 321 L + +S + + + ++Q + + Sbjct: 286 PDLALPPGIYTASGKAEGQLRKIDIRNAVIAHKNSLLRLQGELLNLNQPDFLGFRLETDS 345 Query: 322 AESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 + D +T + K D+ S + + E SGD ++ Sbjct: 346 SRISGDFLQTAITDTTIKNLAEP---AGDLMISGYGQGNLKEFFTDLSIETESGDMLL 400 >gi|242241070|ref|YP_002989251.1| hypothetical protein Dd703_3672 [Dickeya dadantii Ech703] gi|242133127|gb|ACS87429.1| conserved hypothetical protein [Dickeya dadantii Ech703] Length = 1277 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 40/353 (11%), Positives = 97/353 (27%), Gaps = 36/353 (10%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L G + V++ +P FR G + + Sbjct: 1 MRRLPGILAAAGAILIVLVALVVSGLRMALPTL---DYFRPQVVAWVQSATGLSVELD-R 56 Query: 54 IKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPH 111 + F P++ +++RI + + E +S+ + L + + D+ + Sbjct: 57 LSGRWETFGPTLEIENLRIHHPDAD---WRSERISLALDVWQSLLHAQWKFRDLTFYRLQ 113 Query: 112 LNF--YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDL 165 + L + S + M + + ++ ++ ++ L+ L Sbjct: 114 FDLNTPLDLQRQSGRTWQPDRMGDLFLRQFDHFDLRDSQVTFQTPAGNRAVLSIPQLTWL 173 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN---KRSAFKITANFPAKNKAISLKIQ 222 N + R IS S + G V + + A+ +S ++ Sbjct: 174 NSKNRHRAEGQISLSSFNGQHGVVQVRMDLRDEQGWLNNGTVYLQADKIDMKPWLSRWVR 233 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGN------ 275 L L E + + +R++ + Sbjct: 234 NNTGLESADFSLAAWLNVREGDIHGGDLLLQEGSASWRDGATPHRLDINRMTVHASRYQN 293 Query: 276 ---FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 I N+ + + + + + D E L + + Sbjct: 294 GWMLDIPALNMATDGARWPAGKLAALWLPADTQLLGPDREPELRIRGSQLDLE 346 >gi|119356184|ref|YP_910828.1| hypothetical protein Cpha266_0345 [Chlorobium phaeobacteroides DSM 266] gi|119353533|gb|ABL64404.1| conserved hypothetical protein [Chlorobium phaeobacteroides DSM 266] Length = 1512 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 53/406 (13%), Positives = 126/406 (31%), Gaps = 38/406 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGI---KIHIL 59 ++V IG L S ++ V + + F + F + + + + G + K+ + Sbjct: 5 KKVFIGFLALLSAGVLLLSIVAAIVLNSGFLDRFAKDLAVKLFNE-EFYGHLELQKVKLN 63 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS---GEIRVFDMYIDQPHLNFYL 116 V RI + ++ + +++R FL +L ++ + +D +N Sbjct: 64 FPNKVTILSPRIYEPDEDLPALSADKVTLRFNFLTILKPKIDKLSFRKIKVDSLLINVIE 123 Query: 117 SSKGVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV---YFLSDLNL 167 G N ST I + + + ++ + ++ + +++L Sbjct: 124 RENGKRNIDLIFTSRKPDSTDAPIESFFSKVVTLRNSSLNYSRTLPNETPLALTVQNISL 183 Query: 168 QISA--------RFLNIISPLSIDSIKGSVIAE-GTGNF---DNKRSAFKITANFPAKNK 215 +++ F I L++D + S + G+G F + + + A N Sbjct: 184 DLNSLRLKIKKKEFGGTIEALALDIPQHSFRLKQGSGQFFVSEKRADIIALKATSDKSNA 243 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV-FSVAGDFSKLLNLELSAKKSRLSG 274 +SL + F + P L + ++ ++ +++ + S Sbjct: 244 ELSLSLDKFNIFDPDQKKL-----LLAGKSFLDIQALNIHTRDLNMIYPDIALPEGVYSL 298 Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNK-TKVSQDEENLLNFSENGAESMHDLNETDF 333 + I K S K V + ++ D + F Sbjct: 299 KGDARSQSNTIEIIKGVLAHNKSHLAVKGKLLNVQNKNAFGYQLEIDSSKIDPDFFQAFF 358 Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 +K K + I + + +G+ I Sbjct: 359 ---SDKNQKELIARIGAISFIGKAHGNLKELSTDVHILTKAGNASI 401 >gi|327402312|ref|YP_004343150.1| hypothetical protein Fluta_0303 [Fluviicola taffensis DSM 16823] gi|327317820|gb|AEA42312.1| hypothetical protein Fluta_0303 [Fluviicola taffensis DSM 16823] Length = 892 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 104/357 (29%), Gaps = 46/357 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-- 59 L+ I LF ++ + + D + + + K+ V I + Sbjct: 11 LKWFFIIFSGLFLLITILLYAF-----KDDIIDYAVSEINKSLKAKVNVD-KIDVTFWAT 64 Query: 60 -PFPSVFFKDIRIDQK----EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 P S+ F + I E + ++ + + V + I L Sbjct: 65 FPDLSLDFNHVFIQDPFKNSTSKDTLLYTEQIRLKFSPADIWNENYHVKKIVIKPGTLQL 124 Query: 115 YLSSKGVSNWFQRKSTMD---MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 + G N+ K + + LE I G R ++ ++ Y ++Q+ Sbjct: 125 KIRKNGEENYDILKESDSKEKTTFKLTLESIKASGIRFSYSNKVNENSYKAKIQDIQLVG 184 Query: 172 RFLNIISPLSIDS---------------IKGSVIAEGTGNFDNKRSAFKITANF-PAKNK 215 F +S ++ I + + + D + F+I Sbjct: 185 NFTQDQFDISTNADFYIQRIQNGLVPFVINQQASTQVSIHIDQVKELFEINNGKLLLAQI 244 Query: 216 AISLKIQLFPLAYPIIIDLF--------GNLFWNEKQPIYSGVFSVAGDF-SKLLNLELS 266 +++ + + ID L + E + + S G F + N Sbjct: 245 PFDFNLKVDSTSIKLNIDADKIPLAELANKLAFKEVETVSKLKGSGTGSFHLSMNNELKK 304 Query: 267 AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 +++ NF I +G + L S+ D + S +N + Sbjct: 305 DSYPKVACNFSIDNGKLTEP----TKGLTLSNIDLKGEYS-SLKGKNKEELTIRNVS 356 >gi|172036071|ref|YP_001802572.1| hypothetical protein cce_1156 [Cyanothece sp. ATCC 51142] gi|171697525|gb|ACB50506.1| hypothetical protein cce_1156 [Cyanothece sp. ATCC 51142] Length = 1788 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 41/349 (11%), Positives = 97/349 (27%), Gaps = 25/349 (7%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64 + + + ++ G + + E+Q + + + + + V Sbjct: 30 IGWSVSVVLLGLIGGTISGGFLVQRN-LTPVVEKQLSTFLNRPVELGELEGFSFN---YV 85 Query: 65 FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124 F + + GL + L + ++ +P +G Sbjct: 86 RFGQTDLLTTPTDPANVSMAGLKIAYNPLKYIIDGTLEIEVTAIEPSAYLEQGKEGNWLL 145 Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKII----DQESDQVYFLSDLNLQISARFLNIISPL 180 Q + + +++ ++ G+ II D D L +++ I N Sbjct: 146 TQFNTLNPNSP-IRFKQLGIEQGKAIIISRSKDGIKDPSINLENISGIIQPINNNSEIKF 204 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII---DLFGN 237 + S + G + + N + ++ +I L PI + + N Sbjct: 205 QVKSHIVN---SGNFHISGIFNEENRATNLLVRGHQLNAEIISQVLPLPIELQSGKIDAN 261 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297 L S + VA ++ + + G + + Q Sbjct: 262 LEVAHANNQLSNLQGVARLNQVDTRVKGLPQLLKTHGQLQFKGKKINFDEVITQFG---- 317 Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346 + K D E N + D F+ +++ KN + Sbjct: 318 --EVTGVVKGDIDLEKGFNLGVKTQVTSI----QDIFKTIKQQPKNLSV 360 >gi|301383150|ref|ZP_07231568.1| hypothetical protein PsyrptM_10962 [Pseudomonas syringae pv. tomato Max13] gi|302063738|ref|ZP_07255279.1| hypothetical protein PsyrptK_27459 [Pseudomonas syringae pv. tomato K40] gi|302133788|ref|ZP_07259778.1| hypothetical protein PsyrptN_20459 [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 987 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 34/331 (10%), Positives = 90/331 (27%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + L V+V + FI +Q ++ ++ P+ Sbjct: 1 MSKGLKRTLGSLLAVIVLYSLLGFFILPGVALRIANQQLANYSTVPARLE---RLEFNPY 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 58 TLELTLWGLNIGTP--GKEQVAFEKLYANLQIDSLWTKALHLQRVELIKPKAELLFDKQG 115 Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168 N + + + +I + G + D + LN + Sbjct: 116 KLNLAQLFRLPASEPAKDQPPSKPFPLRIGEIKLADGYVHFQDVRPSEPIEFLYDALNFE 175 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 + + + G + G + S + P A Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLVPITSEGTLKVTDGKMKLWWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L + K S + + + + +S + Sbjct: 236 LPLALENGVLNFSTAYKLDLSKETELKLTNLSASVAPFALNTPDGRPLVRLQHLDVSETS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + Q + ++ + D + Sbjct: 296 VDLARQLVSVGKIRSQKLETWAAREADGQLD 326 >gi|42520822|ref|NP_966737.1| hypothetical protein WD1011 [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410562|gb|AAS14671.1| conserved hypothetical protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 847 Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 55/393 (13%), Positives = 121/393 (30%), Gaps = 55/393 (13%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--- 78 F DW+ +R+ ++ K+ + G IK+ ++ P + ++ + E+ Sbjct: 20 VAATFKDWSGYRKYIIKELEKTYDAKVHIGGKIKVSLI-TPKLTIYNVYVQYNENKEQKL 78 Query: 79 -FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV 137 + + +R FL L ++ + + N N +T + V Sbjct: 79 SDLISVRKIEIRPSFLSLFLFSLQPKSITLFGMKSN-------KENLLNIINTNASGNTV 131 Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197 + +K ++ + +D +N++ A N + + G N Sbjct: 132 DI---VIKDSQVSFKNDFADI------VNIKEVAVKKNKQFFGKVKVGDNNYDFSGKVNI 182 Query: 198 DNKRSAFK---------ITANFPAKNKAISLKIQLFPLAYPII-IDLFGNLFW-----NE 242 + T N + +L + + + + + NL + Sbjct: 183 TKRNVHISVESNFVNLLFTGNRNQEELQGNLTLTINNSSGSVSDLAKIINLSFLSCVIPS 242 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS------DGNVRISRYKLQSILPN 296 + S S+ +L++ +K + SG + + N+ S+ L SI + Sbjct: 243 ENIKISSNISLNESEFTATDLKIDSKSMQASGTIQNDRKGNHTNFNISFSKVDLDSIQND 302 Query: 297 SSTDEDNK-------TKVSQDEENLLNFSENG---AESMHDLNETDFFEEEEKKNKNDDL 346 S + K V ++ N + + D + K N L Sbjct: 303 SQRTMNMKDLLECFRAVVPKNLSLNFNMEASNIQYQNKILDNFRAVLKSTDGKVKVNTLL 362 Query: 347 KKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 K I N + F+GD ++ Sbjct: 363 KFPGI---NNISYLSGEISNNNVLSEFNGDLLV 392 >gi|58698633|ref|ZP_00373528.1| conserved hypothetical protein [Wolbachia endosymbiont of Drosophila ananassae] gi|225630674|ref|YP_002727465.1| hypothetical protein WRi_009630 [Wolbachia sp. wRi] gi|58534855|gb|EAL58959.1| conserved hypothetical protein [Wolbachia endosymbiont of Drosophila ananassae] gi|225592655|gb|ACN95674.1| hypothetical protein WRi_009630 [Wolbachia sp. wRi] Length = 847 Score = 67.2 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 51/393 (12%), Positives = 117/393 (29%), Gaps = 55/393 (13%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--- 78 F DW+ +R+ ++ K+ + G +++ ++ P + ++ + E+ Sbjct: 20 VAATFKDWSGYRQYIIKELEKTYDAKVHIGGKVEVSLI-TPKLTIYNVYVQYNENKEQKL 78 Query: 79 -FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV 137 + + +R FL L ++ + + N N +T + V Sbjct: 79 SDLISVRKIEIRPSFLSLFLFSLQPKSITLFGMKSN-------KENLINIINTKASGNTV 131 Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197 + +K ++ +D +N++ A N + + G + Sbjct: 132 DI---VIKDSQVSFKSDFADI------VNIKEVAVKKNRQFSGKVKVGDNNYDFSGKVDI 182 Query: 198 DNKRSAFK---------ITANFPAKNKAISLKIQLFPLAYPIIIDLFG------NLFWNE 242 K T N + +L + + + + + Sbjct: 183 TKKNVHISVESNFVNLLFTGNRNQEELQGNLTLTINNSSGSVSDLAKIINLSFLSHVIPS 242 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS------DGNVRISRYKLQSILPN 296 + S S+ +L++ +K + SG + + N+ S+ L SI + Sbjct: 243 ENIKISSNISLNESEFTATDLKIDSKSMQASGTIQNDRKGNHTNFNISFSKVDLDSIQND 302 Query: 297 SSTDEDNK-------TKVSQDEENLLNFSENG---AESMHDLNETDFFEEEEKKNKNDDL 346 S + K V ++ N + + D + K N L Sbjct: 303 SQRTMNMKDLLECFRAVVPKNLSLNFNMEASNIQYQNKILDNFRAVLKSTDGKVKVNTLL 362 Query: 347 KKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 K I N + F+GD ++ Sbjct: 363 KFPGI---NNISYLSGEISNNNVLSEFNGDLLV 392 >gi|260767288|ref|ZP_05876228.1| possible exported protein [Vibrio furnissii CIP 102972] gi|260617695|gb|EEX42874.1| possible exported protein [Vibrio furnissii CIP 102972] Length = 1293 Score = 67.2 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 38/347 (10%), Positives = 114/347 (32%), Gaps = 33/347 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R VL L ++ + + + + F+++ + + + + Sbjct: 10 RIVLWLLVSCLVLLAIAITALRVLLPEMNRFKDEIQDWVSEQSHIQFVITDVRGFWRNTH 69 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL---- 116 PS+ + ++ + + + + + + + +L + + ++ I Q L+ Sbjct: 70 PSLALQGVQANLPDGSQIQFDTGRIDVEFDLVQSVLQRQPVIANLIIHQLKLDIRSIDWT 129 Query: 117 ---SSKGVSNWFQRKSTM----DMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168 + G S+ + + D + L+ V+ I D + + L+ + Sbjct: 130 RLNQTDGQSSQANTQGKILRRLDDLFLRQLDDFTVQDSTILYQTLAGDMRQLNIEKLHWK 189 Query: 169 IS-----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 A I+ I+S++ S E G+ + F ++A+ ++ + Sbjct: 190 NQGARHFADGEISIADTEINSLQVSANFEDHGSLQDISGNFYLSADKLRVRPWLTRYLTD 249 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN-----LELSAKKSRLSGNFKI 278 ++ + QP+ G + + L L + +LS Sbjct: 250 ETGIERGVVSFNAWMTLKNSQPV-DGYVELKPSELAWQSDERHELLLESGIVQLSP---- 304 Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL-LNFSENGAES 324 ++ +++ + L+ ++ + V+ D + + + + Sbjct: 305 TEKGWQVNAHSLKLRTDDTPWP---EVDVALDWQPEQWRLNVSQLDI 348 >gi|88802988|ref|ZP_01118515.1| outer membrane assembly protein [Polaribacter irgensii 23-P] gi|88781846|gb|EAR13024.1| outer membrane assembly protein [Polaribacter irgensii 23-P] Length = 861 Score = 67.2 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 39/359 (10%), Positives = 94/359 (26%), Gaps = 30/359 (8%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI---LPFPSVFFKDIRIDQKE 75 +PL + ++ K + + P+ S+ ++ I K Sbjct: 29 AMSAIPLLF-KDKILALVSDTINNKINATVSFK-ELDLSFFRNFPYASLRVNELAIINKA 86 Query: 76 DG--SFESKIEGLSMRAEFLPLL---SGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 E ++ + L + I + + LN +N+ K Sbjct: 87 PFLRDTLFHAEKINFTIKITSLFYYKTAPIAIDRISATNGTLNIIFDKNNSANFDIAKKN 146 Query: 131 MD------MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 +++ + ++ D+ S L+++ F I + + Sbjct: 147 NSVTTETESAVALLINEYALENINFSFSDETSKVKLALNNIYHSGKGNFTKEILDIDTKT 206 Query: 185 IKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243 S+ + + N +N + K + + ++ G + E+ Sbjct: 207 TAKLSLDYQNINYLKDINIKLNAALNIDLQNSKFTFK-ENTASINKLPLEFNGFIQLTEE 265 Query: 244 QPIYSGVFSVAGDFSKLLNLEL----SAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 Y F K L L S + + V + +I + + Sbjct: 266 GQFYDMAFYTPNSSFKNLLALLPKQYSKDLNGIETKGNFDLNGVVKGSFTETTIPALNIS 325 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHD---LNETDFFEEEEKKNKNDDLKKDDIQYSV 355 + D +N + + ++ + N K D +S Sbjct: 326 FVSKNAMFKYTSLPK-----SVNNINIDASIINTSGYLKDTKIAITNTSFKLDKDLFSA 379 >gi|237807016|ref|YP_002891456.1| AsmA family protein [Tolumonas auensis DSM 9187] gi|237499277|gb|ACQ91870.1| AsmA family protein [Tolumonas auensis DSM 9187] Length = 679 Score = 67.2 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 22/303 (7%), Positives = 83/303 (27%), Gaps = 24/303 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R + ++ + + + F G + + G + + L Sbjct: 5 MHRAFRWFLYTILALVAAIWLTLGLLKPEHLKGPFVAWVQQQTGLPLEI-GKLNYNPLYP 63 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 V +++ + + KI + + ++ + + I P + Sbjct: 64 NIVLAENVTLG------PDIKIGKIYLEIAGGSWWQRQLHIAHLDIINPQIT-------- 109 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSD---LNLQISARFLNII 177 W + + + ++ + + + + L++ + + + Sbjct: 110 --WRPGLTLPQPLRQLQVDDLTIDKLQFSWPNGSLEGGSLHLTNWQPIRNGVVIPLTEVN 167 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN---KAISLKIQLFPLAYPIIIDL 234 D ++ + ++ G + +A K++ + + ++ ++ I Sbjct: 168 FDARADRLQYASLSLGKTRIEGTLTAEKLSVSDLQSDLFHGGMAAELTWDLKNNRIDFQQ 227 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 W + + + LS F ++ + + + Q Sbjct: 228 LALANWQLDLQTFPALPLALPQIFADQVTLENVSAIDLSKRFALNQATGTLEKLQWQPGQ 287 Query: 295 PNS 297 + Sbjct: 288 LPA 290 >gi|116624922|ref|YP_827078.1| hypothetical protein Acid_5848 [Candidatus Solibacter usitatus Ellin6076] gi|116228084|gb|ABJ86793.1| hypothetical protein Acid_5848 [Candidatus Solibacter usitatus Ellin6076] Length = 776 Score = 67.2 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 97/313 (30%), Gaps = 26/313 (8%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE--DGSFESKIE 84 + + +G+K+ + G + ++ P + I + + IE Sbjct: 29 FTADQYGRRLQISLERALGRKVEI-GKVHFNLFKGPGFSVDKVIIYEDPAIGMEPVAYIE 87 Query: 85 G---LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK----GVSNWFQRKSTMDMIHNV 137 + + LL G + + +D+ +N S G N+ ++ Sbjct: 88 EPGSMEVVPSIWSLLGGRFVISSIRLDEASINLTKSGPASEWGRWNFASF---INPSVIR 144 Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK----------G 187 + IHV+ GRI ++ V++L++ +L IS ++ + + G Sbjct: 145 TVPAIHVRNGRIHFKFGDTKNVFYLTETDLDISPAGVSGDWKIECSAKPARTDRPAQGLG 204 Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 S +G + + A + +L + + +L Sbjct: 205 SFTLKGRWYAALNTVELDMRVDHAALGEVTALLNGQDMGVHGT-LSSRLHLAGPLNNVGI 263 Query: 248 SGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 +G + GD + + +++ L+ + ++ + + + + Sbjct: 264 TGRLDI-GDVHRWDMMPGNSQGWPLNISGRLDLIGQQFELHSSTAGNATLPLAVHFRAT- 321 Query: 308 SQDEENLLNFSEN 320 + + N Sbjct: 322 DYLSQPHWALAVN 334 >gi|315181287|gb|ADT88201.1| hypothetical protein vfu_A03096 [Vibrio furnissii NCTC 11218] Length = 1293 Score = 67.2 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 38/347 (10%), Positives = 114/347 (32%), Gaps = 33/347 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R VL L ++ + + + + F+++ + + + + Sbjct: 10 RIVLWLLVSCLVLLAIAITALRVLLPEMNRFKDEIQDWVSEQSHIQFVITDVRGFWRNTH 69 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL---- 116 PS+ + ++ + + + + + + + +L + + ++ I Q L+ Sbjct: 70 PSLALQGVQANLPDGSQIQFDTGRIDVEFDLVQSVLQRQPVIANLIIHQLKLDIRSIDWT 129 Query: 117 ---SSKGVSNWFQRKSTM----DMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168 + G S+ + + D + L+ V+ I D + + L+ + Sbjct: 130 RLNQTDGQSSQANTQGKILRRLDDLFLRQLDDFTVQDSTILYQTLAGDMRQLNIEKLHWK 189 Query: 169 IS-----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 A I+ I+S++ S E G+ + F ++A+ ++ + Sbjct: 190 NQGARHFADGEISIADTEINSLQVSANFEDHGSLQDISGNFYLSADKLRVRPWLTRYLTD 249 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN-----LELSAKKSRLSGNFKI 278 ++ + QP+ G + + L L + +LS Sbjct: 250 ETGIERGVVSFNAWMTLKNSQPV-DGYVELKPSELAWQSDERHELLLESGIVQLSP---- 304 Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL-LNFSENGAES 324 ++ +++ + L+ ++ + V+ D + + + + Sbjct: 305 TEKGWQVNAHSLKLRTDDTPWP---EVDVALDWQPEQWRLNVSQLDI 348 >gi|264679373|ref|YP_003279280.1| AsmA [Comamonas testosteroni CNB-2] gi|262209886|gb|ACY33984.1| AsmA [Comamonas testosteroni CNB-2] Length = 1298 Score = 67.2 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 44/393 (11%), Positives = 114/393 (29%), Gaps = 54/393 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LRR++ + L + L+ VP + E++A +G+ + V KI P+ Sbjct: 10 LRRLIWSVLALLLLWLLLWAVVPWV-----AKSQLEKRAAEKLGRGVHVG---KIEFAPW 61 Query: 62 -PSVFFKDIRI----------DQKED----------GSFESKIEGLSMRAEFLPLLSGEI 100 S+ ++ I E + +I+ + + A L Sbjct: 62 AMSITLHELVIDKAIKKVAETADPEGSAAQKDLKSAAEPQLQIKRIFINASAQSLFRLAP 121 Query: 101 RVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKII 152 + + +D P + S G + + L I ++ GRI++ Sbjct: 122 VLDAIEVDAPVVRLTQHSLGKLDIDDVIARLSEPDDKEPSKPLSFALYNIALRDGRIELN 181 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212 D+ + + L DL L I + V+ + + + + Sbjct: 182 DEFVQRKHELKDLQLSIP------FISNLASKREIKVLPHLAFDLNGSKFDTSGESTPFT 235 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 + +++++ + + G + + SGV ++ + + Sbjct: 236 DTRQTAMQLKWEHIDLAPYL---GYVPASVPVQPLSGVLDT---DLQISFEQKDQPVVSI 289 Query: 273 SGNFKISD----GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN-GAESMHD 327 SG +S+ ++ + + +++ + + + + Sbjct: 290 SGKLALSNVAVQDRQSAPLLNFDALEVQLKNVQPLQNQIALESVRWVKPEVHASRNAQGV 349 Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEE 360 +N + + + Sbjct: 350 INWLGLNAPAGAPAAPLEKAVPEPASAEASTPA 382 Score = 47.6 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 26/288 (9%), Positives = 83/288 (28%), Gaps = 49/288 (17%) Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 + ++ + ++ + L ++ + + L +I + + +P ++ +++GV N Sbjct: 293 LALSNVAVQDRQSA-PLLNFDALEVQLKNVQPLQNQIALESVRWVKPEVHASRNAQGVIN 351 Query: 124 W--------------------------------FQRKSTMDMIHNVILEKIHVKGGRIKI 151 W + V +++ ++GG + Sbjct: 352 WLGLNAPAGAPAAPLEKAVPEPASAEASTPAQADAKAEKPGKPLVVGVQQFDIEGGIVHW 411 Query: 152 ID----------QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201 D + V +L ++A + + + V D + Sbjct: 412 QDAATGAAPAALTLAPLVLQAKNLAWPMNAPLQLTATAGLQTAEQARVEGAARLAVDGEA 471 Query: 202 SAFKITANFPAKNKAI----SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGD 256 + N + + F +++ + W E + + Sbjct: 472 TDKAGNLNLKLEQMPLQWVQPYMQAHFKPQLSAMLNTDARISWGEGGVVAEVAELTADKL 531 Query: 257 FSKLLNLELSAKKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDN 303 + ++ ++ ++SG ++ V++ +Q + D Sbjct: 532 QLQDKQAPVNIEQIKVSGVQVDLAARQVQVEAIAVQKPQLAALRDAQG 579 >gi|104783684|ref|YP_610182.1| hypothetical protein PSEEN4740 [Pseudomonas entomophila L48] gi|95112671|emb|CAK17399.1| conserved hypothetical protein; putative signal peptide [Pseudomonas entomophila L48] Length = 978 Score = 67.2 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 32/331 (9%), Positives = 93/331 (28%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + L ++ + I +Q ++ +I + PF Sbjct: 1 MPKGLTRAVGALLALVALYSLLGFLILPGIALRVANQQLAQYATLPAHLQ---RIELNPF 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + ++I + G + E L L + + + + +D+P + G Sbjct: 58 SLELTLWGLQIGEP--GKEQVGFERLYANLSLDSLWTKALHLEAVALDKPRTELLFAKDG 115 Query: 121 VSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166 N + + + I + G + D + +L Sbjct: 116 SLNLTQLFKLPPSEAKPDEPPSDPFPLRIGSIKLSEGYLHFQDLRPSEPIEFLYDSMNLE 175 Query: 167 LQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 L+ + + + +++ + G + GT + S + P A Sbjct: 176 LKNLSTLPDDNADMTLVANGPAGGRIDWSGTLSLAPIASEGTLKVTEGKMKAFWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ ++ L + S + + +S + Sbjct: 236 VPLVLEDGVVSLDTHYKLNLSKETELLLDNTSVRVAPFAIKAPDGRPLARLASLEVSETS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + + + ++ + D + Sbjct: 296 IDLAKQLVTVGKIRSEKLETWAALESDGQLD 326 >gi|241764379|ref|ZP_04762405.1| conserved hypothetical protein [Acidovorax delafieldii 2AN] gi|241366222|gb|EER60786.1| conserved hypothetical protein [Acidovorax delafieldii 2AN] Length = 1383 Score = 67.2 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 26/267 (9%), Positives = 67/267 (25%), Gaps = 26/267 (9%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAE 91 FR E QA +G + + PS + + + ++ + + Sbjct: 51 FRPQLEAQAARALGVPVRIGSITARSEGLIPSFELLGVALLDAQG-RPALQLPRVVVAPS 109 Query: 92 FLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-------QRKSTMDMIHNVILEKIHV 144 LL +YI+ P L+ + G + ++ + Sbjct: 110 PRSLL--HWGFEQLYIEHPDLDIRRQADGRIVVAGLTFSESAGNNNAAADWLFSQGEVVI 167 Query: 145 KGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSI---DSIKGSVIAEGTGN---- 196 +GG ++ D++ L ++++ + ++ + G Sbjct: 168 RGGTLRWTDEQRGAPELALENVDVLLRNGSWQHNMRIAATPPSAWGDRFTLTGRFRAPLL 227 Query: 197 --FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG----- 249 D + +S +++ + G L Sbjct: 228 RANDGNWQHWSGQLFADFTRVDVS-RLRHHADVGVEVAQGRGALRAWADVQRGQIVGGTA 286 Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNF 276 ++ + L + G Sbjct: 287 DLALTDVNATLGPQLQPLTLPSIEGRL 313 >gi|218265014|ref|ZP_03478638.1| hypothetical protein PRABACTJOHN_04348 [Parabacteroides johnsonii DSM 18315] gi|218221682|gb|EEC94332.1| hypothetical protein PRABACTJOHN_04348 [Parabacteroides johnsonii DSM 18315] Length = 1542 Score = 66.8 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 40/379 (10%), Positives = 107/379 (28%), Gaps = 43/379 (11%) Query: 2 LRRVLIGLGF--LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59 ++R+ I + +++ +P F A+ G I + G I++ Sbjct: 5 MKRIGIICLIPMVLVILISILLYIPPF--QNFAVRLATEYASETTGMNIRI-GQIRLSF- 60 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 ++ +D+++ D +E + LPLL E+ V + + N + Sbjct: 61 -PLNLTVRDVKVITPPD--TLLSLESFQVNIRPLPLLKKEVLVDAIDLRGMKANTGNLIE 117 Query: 120 GVSN-------WFQRKSTMDMIHNVILEKIHVKGGRIKII-----------DQESDQVYF 161 G+ + + L KI + I ++ Sbjct: 118 GMEIKGTLGKLYAKADRIDLGKEIARLNKIDLSDTAITLLINDTTTNKDTTSTTVGWKLK 177 Query: 162 LSDLNL-------QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214 L ++L Q+ L + + + + ++ G+ + R ++ + Sbjct: 178 LDQIDLNRVAFAMQMPDDSLRLSTYIDKAGLTDGMVDLGSARYSASRFLLSGSSLSYDGS 237 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274 + P + ++ +Y G N S L+G Sbjct: 238 YSEP-TPGFDPSHIALN-----DVNIQIDSLLYGGRDISVRIKEFSANDRSGLTLSSLTG 291 Query: 275 NFKISDGNVRISRYKLQSILPNSSTDED---NKTKVSQDEENLLNFSENGAESMHDLNET 331 + +++ L++ N + + + + + Sbjct: 292 DISSDSTTIQVPELLLKTPYSEIRLLATVPWNSFDDTPSSTLRSLLTASVGKEDVFIFAG 351 Query: 332 DFFEEEEKKNKNDDLKKDD 350 +E ++ +++ Sbjct: 352 PLPKEFKQAYPQKEIRLTA 370 >gi|198277151|ref|ZP_03209682.1| hypothetical protein BACPLE_03359 [Bacteroides plebeius DSM 17135] gi|198269649|gb|EDY93919.1| hypothetical protein BACPLE_03359 [Bacteroides plebeius DSM 17135] Length = 998 Score = 66.8 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 38/286 (13%), Positives = 94/286 (32%), Gaps = 29/286 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLF-IDWTDFREDFERQATLIVGKKIAVKGGIKIHIL- 59 +R I LG L +V L+ V F A + ++ +K +++ Sbjct: 9 IRLTAISLGALLTVFLLAVTIVVNFIFTPEKLTPVVLNVANQSLNARLQMK-SVELTFFS 67 Query: 60 --PFPSVFFKDIRIDQKE-------DGSFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQ 109 P + D + K + + + L + I + + ++ Sbjct: 68 TFPRFGLKVTDGVLVSKAINDTLWQKTDSLVSFKKCVVVVNPVDYLLHDKISLRYLGLED 127 Query: 110 PHLNFYLSSKGVSNWFQRKS-----------TMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 + + + +G SNW KS I + + ++ +K + D+++ Sbjct: 128 ASVYAFKNKEGKSNWDIVKSTEETVEEDTTSQKPQIQEIDINRVALKRTNVTFDDRDTRV 187 Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIA--EGTGNFDNKRSAFKITANFPAKNKA 216 + +LN+ + A S L+++ +++ +G ++ ++ Sbjct: 188 YARVQNLNMNLKASLKKDYSMLALEYDNENLLFWQDGQLLVNHLAVGLNADMQLDRVSRR 247 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNE--KQPIYSGVFSVAGDFSKL 260 ++LK I +DL G L + + + + + Sbjct: 248 LTLK-DTGLTLNGIALDLSGTLGRDTIGGPTLVDLTYKLHAPSLET 292 >gi|297539141|ref|YP_003674910.1| hypothetical protein M301_1961 [Methylotenera sp. 301] gi|297258488|gb|ADI30333.1| protein of unknown function DUF748 [Methylotenera sp. 301] Length = 1211 Score = 66.8 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 108/351 (30%), Gaps = 40/351 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKI-AVKGGIKIHILP- 60 ++VL L L + + G F + ++ I KK+ ++ K+ P Sbjct: 7 QKVLQFLVTLPAKIFAGLFIFYCLFGYFAVNPLAKKLVPWIAEKKLASIGSVGKVTFDPL 66 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 ++ ++ +K + L + E + + ++ + P +S +G Sbjct: 67 RLKATVENFKLTEKSGA-PLAGFAKLVVDFEASGIFKRAWKFKEISLVDPQALIAISPQG 125 Query: 121 VSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF--LSDLNLQ-- 168 NW + D I +I++++ VK G I +D ++ L+ + Sbjct: 126 KLNWADLIAKLNEDKTPPDDTIPRLIIQQLSVKLGNIDYVDASRATPLKAAITPLDFELG 185 Query: 169 ----ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR----SAFKITANFPAKNKAISLK 220 + N + + G++ +G + A N A + Sbjct: 186 QFSTLPQDRGNYLIAANFPEQGGTLKWKGNIGVNPVASKGFVALDGVKIAKLMNIAKGVY 245 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIY---SGVFSVAGDFSKLLNLELSAKKSRLSG--- 274 + L N +P + ++ N ++S K++ L+ Sbjct: 246 LPLTVSQGDAQTSFEYNFSLPNNKPKLVLNNVALNLNSVVGDAPNAKVSLKQANLTIPRL 305 Query: 275 --------NFKISDGNVRISRYKLQSIL---PNSSTDEDNKTKVSQDEENL 314 + D N++ S +++ S N + N Sbjct: 306 DFVMNNAPQLQFQDLNMKFSGFEINSGSQSLLVLPQVAVNHVSMDLAARNA 356 >gi|158423866|ref|YP_001525158.1| putative assembly of outer membrane protein [Azorhizobium caulinodans ORS 571] gi|158330755|dbj|BAF88240.1| putative assembly of outer membrane protein [Azorhizobium caulinodans ORS 571] Length = 724 Score = 66.8 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 28/290 (9%), Positives = 72/290 (24%), Gaps = 30/290 (10%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGL 86 + + R G+ + ++G + ++P+P + + + + G+ + E + Sbjct: 128 VPQGEVRRAATEALAASSGRDVRIEGESRFSLVPYPRIVLQRVTLAMP--GTSALESEQV 185 Query: 87 SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG 146 R LPLL G V + + +P L + + + ++ Sbjct: 186 VARLRLLPLLLGRADVSSVTLRRPILTMSGAVEVPHLSLAPFVRTPTAP-----SLRIED 240 Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKI 206 G I D +S ++ ++ S D G Sbjct: 241 GTIAWRDSGGLTQELVSGISARLDHSSGGKGLSASADFTWRDKTTSGRLTVA------DA 294 Query: 207 TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS 266 +A + L + + P G ++ + + + Sbjct: 295 SAFLDGMDSDTRLDLFSDGATLKFR-----GVAAAGANPAAEGDIALDSPDLRSVLNWVG 349 Query: 267 AKKS--------RLSGNFKISDGNVRIS----RYKLQSILPNSSTDEDNK 304 + ++ + D + Sbjct: 350 TTPPTSGGFGRFSFGARLSAHGREISLTPAYVEMDGNRGEGGLTLKLDGR 399 >gi|94265027|ref|ZP_01288796.1| hypothetical protein MldDRAFT_0043 [delta proteobacterium MLMS-1] gi|93454516|gb|EAT04801.1| hypothetical protein MldDRAFT_0043 [delta proteobacterium MLMS-1] Length = 597 Score = 66.8 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 81/281 (28%), Gaps = 42/281 (14%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV-FFKD----IRI 71 L+ A P + + + + + + P V + R+ Sbjct: 117 LLTALLAPRL---------LADYFSRQLERPVTIA---RADWQPVNRVLTLHNGIVGPRL 164 Query: 72 DQKEDG-SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 D +D L R L G + ++QP ++ + G N Sbjct: 165 DNPDDRIDPLLSFRTLQARIRPGNLWHGGPLFKTLRLEQPFIHLHRDRTGRYNLAPDLFL 224 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESD----QVYFLSDLNLQISARFLNIISPLSIDSIK 186 + + + ++ GR+ D + ++N Q+ + Sbjct: 225 LGGRLP---DPVEIRDGRLFYSDHRGGDDRRYQVEIREINGQLQPIASRG------SGSR 275 Query: 187 GSVIAEGTG-NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 ++ G G + ++TA + + L + + + +L L Sbjct: 276 VALELGGIGPEAAGVKLRGELTAGRSGADDQLQL-----VVNHWPLAELAPYLQPLLGHT 330 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 I +G+ + F+ EL K ++++ + Sbjct: 331 IAAGLLDMQASFTPGPGTELHVSK-----QLQLTNLRLTSP 366 >gi|86130743|ref|ZP_01049342.1| conserved hypothetical protein [Dokdonia donghaensis MED134] gi|85818154|gb|EAQ39314.1| conserved hypothetical protein [Dokdonia donghaensis MED134] Length = 893 Score = 66.8 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 53/381 (13%), Positives = 119/381 (31%), Gaps = 36/381 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI 58 ++++ +G + V+++ P FR E + + + + + + Sbjct: 1 MKKIFKIIGIVVLVLVIVLAASPFL-----FRGKLEDLLKETINNNLNAQVEWSSLDLSL 55 Query: 59 ---LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSG----EIRVFDMYIDQ 109 P +V D ++ G + + + + L I + + + + Sbjct: 56 FRSFPDATVIVNDFKVVNNAPFAGDTLASGKEIRIEMGVTQLFKNTADEPIAIDALSLLE 115 Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHN---------VILEKIHVKGGRIKIIDQESDQVY 160 +++ + S G +N+ K T L++ + +I D+ + Sbjct: 116 ANVHVQVDSLGNANYDIVKETPTTETTTEESSEPFVFNLQEYSLIDSKIIYDDRSTQTHL 175 Query: 161 FLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 L+++N S F I S L + S GT D + + + + Sbjct: 176 ELTEVNHTGSGDFSAIESELDTKTHAVVSFDYGGTHYLDGHDLDLEAVIQMELEKQKYTF 235 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKI 278 K + + ++ G + E + F + DF L L ++ L G Sbjct: 236 K-ENLAKINELPLEFNGFIELLEDGNLMDLSFKTPSSDFKNFLALIPKEYRANLDGVETS 294 Query: 279 SDGNVR--ISRYKLQSILPNSSTDE-DNKTKVSQDEENLLNFSENGAESMHDL-NETDFF 334 D V I ++ +PN + N + N + N+T Sbjct: 295 GDFRVSGIIKGKTTETNIPNLDIEIVSNNASFKYPDLPK---RMNNINIDVKIKNDTGIT 351 Query: 335 EEEEKKNKNDDLKKDDIQYSV 355 E + + K D ++ Sbjct: 352 ELTYIEINDLRFKIDQDTFTA 372 >gi|260433383|ref|ZP_05787354.1| conserved hypothetical protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417211|gb|EEX10470.1| conserved hypothetical protein [Silicibacter lacuscaerulensis ITI-1157] Length = 1130 Score = 66.8 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 42/375 (11%), Positives = 96/375 (25%), Gaps = 42/375 (11%) Query: 6 LIGLGFLFSVVLVGAFTVPLFID-----WTDFREDFERQATLIVG-KKIAVKGGIKIHIL 59 L + +F +V++ + + + R+ E + +G KI G I Sbjct: 35 LWAVRGVFLLVVLAFISGLMVVGHRVHAPDWLRDRVESRLDQSLGGLKIRF-GDASFIIN 93 Query: 60 --PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 P + D+ I E ++ + PLL G +R + ++ + Sbjct: 94 EGWRPRLRLTDVSISDAEGRQ-IVQVSDMRASLAMRPLLRGHLRPKRITMNGARIALTRG 152 Query: 118 SKGVSNWFQRKSTMD-------------------MIHNVILEKIHVKGGRIKIIDQESDQ 158 G + L + + + D + Sbjct: 153 RDGALTLTVGSGSSPMRQASTLADMIEQSDAVFMAPALSALTSVELDAITLDYRDLRLGR 212 Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKG-----SVIAEGTGNFDNKRSAFKITANFP-- 211 + L ++ + I + G S+ A T + + F ++ Sbjct: 213 AWVLDGGHILATRSDRQIRLATGFSVLAGRDYVSSIEANYTSTLGSPDAQFGVSITDLPA 272 Query: 212 -AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270 L L PI L G++ ++ + Sbjct: 273 TDVAAQTPALAWLQVLDTPISGALRGSIDGQGALGPVFATLNLGAGAVQPNPETRPVPFD 332 Query: 271 RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK---VSQDEENLLNFSENGAESMHD 327 F + ++ + S + + + V + + Sbjct: 333 SARTYFTYDPVQQVLDFNEVSVVSAWGSVNAEGRAYLQGVDAGTLDSMAVQFRLTGIR-- 390 Query: 328 LNETDFFEEEEKKNK 342 +N D F +E + + Sbjct: 391 VNPADLFIDELQLTQ 405 >gi|167588070|ref|ZP_02380458.1| hypothetical protein BuboB_22166 [Burkholderia ubonensis Bu] Length = 147 Score = 66.8 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 43/126 (34%), Gaps = 9/126 (7%) Query: 2 LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55 +RRV + V + + D+R ER + + ++++ G + Sbjct: 1 MRRVFKVTLAVGLGTYFVASGAFLGLRYVLLPRVDDYRPRIERFVSDKLHAQLSI-GKLA 59 Query: 56 IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 H P V + I ++ + + + LL + + +DQP L Sbjct: 60 PHWSGMQPGVEITGLTIRGRDGRL-ALSVPHATAALSWWSLLRLSPALSSLIVDQPDLVV 118 Query: 115 YLSSKG 120 ++ G Sbjct: 119 ERTADG 124 >gi|226194265|ref|ZP_03789864.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei Pakistan 9] gi|225933730|gb|EEH29718.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei Pakistan 9] Length = 1397 Score = 66.8 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 68/222 (30%), Gaps = 15/222 (6%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + E I ++GG ++ D + D L+ ++I+ I+ +++ + + Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGIVHRIALQAPANGTL 223 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 G +F + + N + P+ P + Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265 >gi|167912404|ref|ZP_02499495.1| hypothetical protein Bpse112_18099 [Burkholderia pseudomallei 112] Length = 1397 Score = 66.8 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 31/249 (12%), Positives = 77/249 (30%), Gaps = 24/249 (9%) Query: 2 LRRVLIGLGFLFS---------VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKG 52 LRRV G+ + + + +P ++R E + + ++ + G Sbjct: 23 LRRVFKGVLAIAIAAYFIAATAFLGLRYLLLPRI---DEYRPRIEAFVSQKLHAELRI-G 78 Query: 53 GIKIHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111 + H P V + I ++ + + + L + + +D P Sbjct: 79 RLAPHWSGMQPGVDISRLTIRGRDG-RVALSVPHATAALSWRSLARFAPTLSSLVVDDPD 137 Query: 112 LNFYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 L + G + E I ++GG ++ D + D L+ Sbjct: 138 LLTERRADGSLFVAGVAVPTTKTGADDTFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELA 196 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 ++I+ ++ +++ + + G +F + + N + Sbjct: 197 LTGIRIAVLNDGLVHRIALQAPANGTLFHGPLDFRARFVHQALAPIGKPSNWTGDAYLST 256 Query: 224 FPLAYPIII 232 P+ P + Sbjct: 257 GPVDLPTLA 265 >gi|120611341|ref|YP_971019.1| AsmA family protein [Acidovorax citrulli AAC00-1] gi|120589805|gb|ABM33245.1| AsmA family protein [Acidovorax citrulli AAC00-1] Length = 762 Score = 66.8 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 33/436 (7%), Positives = 92/436 (21%), Gaps = 94/436 (21%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFP--------------SVFFKDIR 70 DW R + + G+ A++G + P P +V + Sbjct: 46 TFDWNRARPWINERVSAATGRHFAIEGDLSARWHWPQPVDMETGWRRWVPGLTVQADRMV 105 Query: 71 IDQKEDGSFE----SKIEGLSMRA-------------EFLPLLSGEIRVFDMYIDQPHLN 113 + + D + R S + Sbjct: 106 LGNRTDFGRYGAVGMDADNADARVVERRAAAASAAASAPGVPASPSAAPASVPASAASAP 165 Query: 114 FYLSSKGVSNWFQRKSTMDMIH------------NVILEKIHVKGGRIKIIDQESDQ--- 158 G + +V + + ++ + + + Sbjct: 166 EAARGAGSGSAPPPPMATVGSATASLKLLPLLVRHVSVGTLSIQAPDVALARRADGSNNW 225 Query: 159 ---------------------VYFLSDLNLQISARFLNIISPLSIDSIKGS----VIAEG 193 ++D L ++ ++ + + V + Sbjct: 226 TFDRPAPDGSASPNPWTVNVARLVVNDGRLAMADAQKDLAFVAHLATQSQPGPYGVRFDV 285 Query: 194 TGNFDNKRSAFKITANFP--AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 G + R A + + + +Q A + ++ G L Sbjct: 286 RGRYARARIEGSGQAGNALSLRQQDVQYPLQFKARAGTVRAEVEGTLANPLALAGMDLQV 345 Query: 252 SVAGDFSKLLNLELSAKKSR---------LSGNFKISDGNVRISRYKLQSILPNSSTDED 302 + + L L G+ + + + Sbjct: 346 LLQAESMADLYPLTGIVLPNTPPFRTKGHLVGSLEPGRAVWDYRDFTGTVGQSD----LR 401 Query: 303 NKTKVSQDE-ENLLNFSENGAESMH-DLN-----ETDFFEEEEKKNKNDDLKKDDIQYSV 355 + + + L + DL + +E+ ++ D ++ Sbjct: 402 GQLTYTSGQPRPRLTGEMASRQLRLADLGPVVGAPSGERPQEKGTSRRAGKVLPDAAFAT 461 Query: 356 NKKEEKDNSHDKENQE 371 ++ D + + Sbjct: 462 DRWNAMDLDLKFKGER 477 >gi|157165048|ref|YP_001467567.1| diaminopimelate epimerase (DAP epimerase) [Campylobacter concisus 13826] gi|112801143|gb|EAT98487.1| conserved hypothetical protein [Campylobacter concisus 13826] Length = 1112 Score = 66.8 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 51/390 (13%), Positives = 116/390 (29%), Gaps = 34/390 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 +++ + G +L+ + F + + + V PF Sbjct: 5 KKIALITGICVVSLLLIYTLLGFFGLPYAIKNIAPKYLKD-YNATLFVS---DAKFNPF- 59 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + + + S + + ++ + + + + +D+P + K Sbjct: 60 TFEL-NATNAELNTTSPLFSTKQIDLKLKPFSIFKKLVEIDIFRLDEPKVKIARDKKANF 118 Query: 123 NW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS--DLN-----L 167 N+ + N L + G DQ + + +S D+N L Sbjct: 119 NFSNFISDDNATSEDNSTSSINFALNNAKIIKGSFSYSDQNLTKPFNVSFDDINYELSSL 178 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 S S+ + G + + ++ + I L Sbjct: 179 NTKKNSAGSHIFDSNSSLAHKIDLNGDIKLNPLKIEGNVSIKDFSIKPVAISFINNDTLN 238 Query: 228 YP-IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 II+L N N + K L+L+ A + L G + + Sbjct: 239 LKNAIINLKINYALNADENATKINLKDGFLNVKGLSLDEGANELSL--------GELELP 290 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-EEEEKKNKNDD 345 ++ L S + + + N + V+ ++ + + +LNE EK N Sbjct: 291 KFDLDSKIADKTEAALNLSAVNLNDI-SFKSAIAASVKSLNLNEISLLANLNEKSELNAT 349 Query: 346 LKKDDIQYSVNKKEEKDNSHDKENQENFSG 375 K ++ + K +E D + N ++ + Sbjct: 350 AKLKNMGANALKIDEAD--RNLANLKDINA 377 >gi|78212558|ref|YP_381337.1| hypothetical protein Syncc9605_1024 [Synechococcus sp. CC9605] gi|78197017|gb|ABB34782.1| conserved hypothetical protein [Synechococcus sp. CC9605] Length = 1473 Score = 66.8 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 32/233 (13%), Positives = 70/233 (30%), Gaps = 2/233 (0%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89 + R ER + +G + + + L + RI E + GL + Sbjct: 28 SRVRPGLERTLSGPLGHDVDIGPYEGLRPL-GLGIAIGPTRILPSAADRSELSLAGLEVS 86 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149 L L V + + + + G F S + + ++ I Sbjct: 87 LAPLASLRRLQPVLQITVHKLRGQLQANETGSYWTFGPLSGDGPLPRLGVQYRLADPALI 146 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209 + Q+ S +++ F + S L +G++ +G G++D + + + Sbjct: 147 RFGPQQQTLELR-SRGAVRLGEAFFSTASELRWVEREGALRLDGQGHWDRRSFRLRTRLD 205 Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262 ++ L + + W + G S+ LN Sbjct: 206 RLKLKPLAAVIAPAQDLDASGTLAGDVQIGWADGALNCRGGLSLKRLKLAALN 258 >gi|126440449|ref|YP_001060299.1| hypothetical protein BURPS668_3288 [Burkholderia pseudomallei 668] gi|126219942|gb|ABN83448.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei 668] Length = 1397 Score = 66.8 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 68/222 (30%), Gaps = 15/222 (6%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + E I ++GG ++ D + D L+ ++I+ I+ +++ + + Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGIVHRIALQAPANGTL 223 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 G +F + + N + P+ P + Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265 >gi|53720444|ref|YP_109430.1| hypothetical protein BPSL2836 [Burkholderia pseudomallei K96243] gi|52210858|emb|CAH36846.1| putative membrane protein [Burkholderia pseudomallei K96243] Length = 1397 Score = 66.8 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 68/222 (30%), Gaps = 15/222 (6%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + E I ++GG ++ D + D L+ ++I+ I+ +++ + + Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGIVHRIALQAPANGTL 223 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 G +F + + N + P+ P + Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265 >gi|299530456|ref|ZP_07043876.1| AsmA [Comamonas testosteroni S44] gi|298721432|gb|EFI62369.1| AsmA [Comamonas testosteroni S44] Length = 1298 Score = 66.8 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 44/393 (11%), Positives = 114/393 (29%), Gaps = 54/393 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LRR++ + L + L+ VP + E++A +G+ + V KI P+ Sbjct: 10 LRRLIWSVLALLLLWLLLWAVVPWV-----AKSQLEKRAAEKLGRGVHVG---KIEFAPW 61 Query: 62 -PSVFFKDIRIDQK--------------------EDGSFESKIEGLSMRAEFLPLLSGEI 100 S+ ++ ID+ + +I+ + + A L Sbjct: 62 AMSITLHELVIDKAIKKVAETAHPEGSAAQKDLKSAAEPQLQIKRIFINASAQSLFRLAP 121 Query: 101 RVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKII 152 + + +D P + S G + N L I ++ GRI++ Sbjct: 122 VLDAIEVDAPVVRLTQHSLGKLDIDDVIARLSEPEDEEPSKPLNFALYNIALRDGRIELN 181 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212 D+ + + L DL L I + V+ + + + + Sbjct: 182 DEFVQRKHELKDLQLSIP------FISNLASKREIKVLPHLAFDLNGSKFDTSGESTPFT 235 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 + +++++ + + G + + SGV ++ + + Sbjct: 236 DTRQTAMQLKWEHIDLAPYL---GYVPASVPVQPLSGVLDT---DLQISFEQKDQPVVSI 289 Query: 273 SGNFKISD----GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN-GAESMHD 327 SG + + ++ + + +++ + + + + Sbjct: 290 SGKLALGNVAVQDRQSAPLLNFDALEVQLKNVQPLQNQIALESVRWVKPEVHASRNAQGV 349 Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEE 360 +N + + + Sbjct: 350 INWLGLNAPTGAPAAPLEKAVPEPASAEASTPA 382 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 26/288 (9%), Positives = 83/288 (28%), Gaps = 49/288 (17%) Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 + ++ + ++ + L ++ + + L +I + + +P ++ +++GV N Sbjct: 293 LALGNVAVQDRQSA-PLLNFDALEVQLKNVQPLQNQIALESVRWVKPEVHASRNAQGVIN 351 Query: 124 W--------------------------------FQRKSTMDMIHNVILEKIHVKGGRIKI 151 W + V +++ ++GG + Sbjct: 352 WLGLNAPTGAPAAPLEKAVPEPASAEASTPAQADAKAEKPGKPLVVGVQQFDIEGGIVHW 411 Query: 152 ID----------QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201 D + V +L ++A + + + V D + Sbjct: 412 QDAATGAAPAALTLAPLVLQAKNLAWPMNAPLQLTATAGLQAAEQARVEGAARLAVDGEA 471 Query: 202 SAFKITANFPAKNKAI----SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGD 256 + N + + F +++ + W E + + Sbjct: 472 TDKAGNLNLKLEQMPLQWVQPYMQAHFKPQLSAMLNTDARISWGEGGVVAEVAELTADKL 531 Query: 257 FSKLLNLELSAKKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDN 303 + ++ ++ ++SG ++ V++ +Q + D Sbjct: 532 QLQDKQAPVNIEQIKVSGVQVDLAARQVQVEAIAVQKPQLAALRDAQG 579 >gi|15599929|ref|NP_253423.1| hypothetical protein PA4735 [Pseudomonas aeruginosa PAO1] gi|9950996|gb|AAG08121.1|AE004887_5 hypothetical protein PA4735 [Pseudomonas aeruginosa PAO1] Length = 1088 Score = 66.8 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 97/335 (28%), Gaps = 38/335 (11%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M + + + L LV L I R +Q ++ +I P Sbjct: 1 MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLR-VANQQLAQYATVPARLE---RIEFNP 56 Query: 61 F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 F + +R+ ++++ + L + L ++ + D+ ++ PH K Sbjct: 57 FSLELTLWGLRLGEEKN--PQLAFRRLYANLQLDSLWKRQLHLADVELEGPHTELLFGEK 114 Query: 120 GVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 G N + +++I + G + D + D + Sbjct: 115 GQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPV---DFSFDP 171 Query: 170 SARFLNIISPLSIDSIKGSVIA----EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 L+ +S L D K +++A G +++ + IT+ K I LK Sbjct: 172 LGFELHNLSTLPDDGAKMTLVATGPNGGRLDWEGDLTLVPITSRGHLSVKDIQLKAWWPY 231 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN---------- 275 + + L + K + G Sbjct: 232 VRDNAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSINSPQGKPLAKLASLDV 291 Query: 276 ----FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + Q + ++ ++D + Sbjct: 292 AATTLDLAKQEVVLGEVRSQGLEAWAAREKDGQLD 326 >gi|167904144|ref|ZP_02491349.1| hypothetical protein BpseN_17981 [Burkholderia pseudomallei NCTC 13177] Length = 1397 Score = 66.8 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + E I ++GG ++ D + D L+ ++I+ ++ +++ + + Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 223 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 G +F + + N + P+ P + Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265 >gi|76811265|ref|YP_334703.1| hypothetical protein BURPS1710b_3332 [Burkholderia pseudomallei 1710b] gi|254261325|ref|ZP_04952379.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei 1710a] gi|76580718|gb|ABA50193.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei 1710b] gi|254220014|gb|EET09398.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei 1710a] Length = 1397 Score = 66.8 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 31/249 (12%), Positives = 77/249 (30%), Gaps = 24/249 (9%) Query: 2 LRRVLIGLGFLFS---------VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKG 52 LRRV G+ + + + +P ++R E + + ++ + G Sbjct: 23 LRRVFKGVLAIAIAAYFIAATAFLGLRYLLLPRI---DEYRPRIEAFVSQKLHAELRI-G 78 Query: 53 GIKIHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111 + H P V + I ++ + + + L + + +D P Sbjct: 79 RLAPHWSGMQPGVDISRLTIRGRDG-RVALSVPHATAALSWRSLARFAPTLSSLVVDDPD 137 Query: 112 LNFYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 L + G + E I ++GG ++ D + D L+ Sbjct: 138 LLTERRADGSLFVAGVAVPTTKTGADDTFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELA 196 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 ++I+ ++ +++ + + G +F + + N + Sbjct: 197 LTGIRIAVLNDGLVHRIALQAPANGTLFHGPLDFRARFVHQALAPIGKPSNWTGDAYLST 256 Query: 224 FPLAYPIII 232 P+ P + Sbjct: 257 GPVDLPTLA 265 >gi|323138640|ref|ZP_08073707.1| AsmA family protein [Methylocystis sp. ATCC 49242] gi|322396128|gb|EFX98662.1| AsmA family protein [Methylocystis sp. ATCC 49242] Length = 643 Score = 66.8 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 32/276 (11%), Positives = 70/276 (25%), Gaps = 15/276 (5%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI 83 P T + Q G +A +G + + P P + + + + + Sbjct: 51 PWLFSPTALLDAISGQLQTSSGLYVATRGRTTLSLTPRPHISIQGVAFADRNGAL-IIEA 109 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK---------GVSNWFQRKSTMDMI 134 + L + PL +G + V + + +P L K + Sbjct: 110 DQLHGVLKLFPLFAGRLEVDSLALVRPRARLDLDQKPIDAPGAAARAAATRPATPEAQKA 169 Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 NV L I + G +++ D D +L S D + Sbjct: 170 DNVRLGVIAIVDGSLRVRRLGQDYAADRIDASLDWRRIGEAATFTASFDWRGERLQTVLW 229 Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254 + + + + +G++ + Sbjct: 230 VARPAMLLRGEQSVATARLDGESVRLEAQGVAQTGLNARFYGHVAGSSPSVR-----QAL 284 Query: 255 GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 G F L ++ S + ++ +L Sbjct: 285 GVFGLSAPLPGPFGDAQFSAQAYLGPREAQLKELRL 320 >gi|237813689|ref|YP_002898140.1| hypothetical protein GBP346_A3466 [Burkholderia pseudomallei MSHR346] gi|237505895|gb|ACQ98213.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346] Length = 1397 Score = 66.8 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + E I ++GG ++ D + D L+ ++I+ ++ +++ + + Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 223 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 G +F + + N + P+ P + Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265 >gi|217420393|ref|ZP_03451898.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei 576] gi|217395805|gb|EEC35822.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei 576] Length = 1397 Score = 66.8 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + E I ++GG ++ D + D L+ ++I+ ++ +++ + + Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 223 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 G +F + + N + P+ P + Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265 >gi|254180750|ref|ZP_04887348.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei 1655] gi|184211289|gb|EDU08332.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei 1655] Length = 1397 Score = 66.8 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + E I ++GG ++ D + D L+ ++I+ ++ +++ + + Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 223 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 G +F + + N + P+ P + Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265 >gi|254194944|ref|ZP_04901374.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei S13] gi|169651693|gb|EDS84386.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei S13] Length = 1397 Score = 66.8 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + E I ++GG ++ D + D L+ ++I+ ++ +++ + + Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 223 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 G +F + + N + P+ P + Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265 >gi|330501863|ref|YP_004378732.1| hypothetical protein MDS_0949 [Pseudomonas mendocina NK-01] gi|328916149|gb|AEB56980.1| membrane protein-like protein [Pseudomonas mendocina NK-01] Length = 1269 Score = 66.4 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 101/310 (32%), Gaps = 21/310 (6%) Query: 7 IGLGFLFSVVLVGAFTVPL---FID-WTDFREDFERQATLIVGKKIAVKGGIKIHI-LPF 61 GLG +V+++ A V L + ++R + E +A+ +G + + G ++ Sbjct: 10 WGLGLCAAVLVLAALYVSLGRELVPMVAEYRLELEDRASAQLGVPVRI-GSLEGRWQGFA 68 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKG 120 P + +D+R+ ++ +G +E + + + L + R+ + D LN +++G Sbjct: 69 PLLVARDVRLGEEGEG---LSLERVQLVPDVAASLMARQPRIAHLQFDGLQLNVQQNAEG 125 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 W + + +E++ ++ + D + L+ L L Sbjct: 126 --GWQLQGLPKRESPELNVERL-LQQLQAVHRISLLDSRVVVQPLD---QEPLLLSYVDL 179 Query: 181 SIDSIKGSVIAEGTGNF-DNKRSAFKITANFP---AKNKAISLKIQLFPLAYPIIIDLFG 236 S+ S +G D + A + + L + L + + Sbjct: 180 SLRYDSNSQRLDGRLLLPDGQPVALSLRTRMQPETWREAESQLYLSLPQSDWASWLPKSL 239 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 W + G F + G L L L G + V I + Sbjct: 240 LGDWQVQHLQAGGEFWLEGRGLALHQGALRLHAPELVGG-QAKRKAVTIKDLAFNAFFAQ 298 Query: 297 SSTDEDNKTK 306 + Sbjct: 299 DEQGVRAQID 308 >gi|167920358|ref|ZP_02507449.1| hypothetical protein BpseBC_17559 [Burkholderia pseudomallei BCC215] Length = 1397 Score = 66.4 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 68/222 (30%), Gaps = 15/222 (6%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + E I ++GG ++ D + D L+ ++I+ I+ +++ + + Sbjct: 165 TFSTWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGIVHRIALQAPANGTL 223 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 G +F + + N + P+ P + Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265 >gi|254299158|ref|ZP_04966608.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei 406e] gi|157808768|gb|EDO85938.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei 406e] Length = 1397 Score = 66.4 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + E I ++GG ++ D + D L+ ++I+ ++ +++ + + Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 223 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 G +F + + N + P+ P + Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265 >gi|119944883|ref|YP_942563.1| membrane protein-like protein [Psychromonas ingrahamii 37] gi|119863487|gb|ABM02964.1| membrane protein-like protein [Psychromonas ingrahamii 37] Length = 1294 Score = 66.4 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 45/381 (11%), Positives = 102/381 (26%), Gaps = 22/381 (5%) Query: 2 LRRVLIGLGF-LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-L 59 L+R+ + LF + + + +F+ D++ + + + + I I Sbjct: 9 LKRIYALIAVKLFILAFLLTLSRIIFVRIDDYKIYAMQWLSSEYNVNLTFE-DISAGIDF 67 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSS 118 + I + D ++ K++ L + F LS + + + Sbjct: 68 SGLILNVSGIELVDSVDLPYQFKLDHLFIYLNFWQSLSEQTLVFNRISAQGADITIK--P 125 Query: 119 KGVSNWFQRKSTMDMIH-----NVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISAR 172 G +N S++ V L K +K ++ D + ++ + LN Sbjct: 126 TGKNNAKSESSSVTTAALQKILLVQLSKFSIKDSQLHFTDPLQRNKTVVIEKLNWINEEG 185 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 S+ + + + A N IS + + Sbjct: 186 RHQGRGYASMLNGLADNSLNFVVDLVGQNEPLAGHLYVAADNFNISHYLTAQVNPNAQLF 245 Query: 233 DLFGNLFWNEKQPIY---SGVFSVAGDFSKLLNLELSAKKSRLSG---NFKISDGNVRIS 286 D + + L +++ F ++ + Sbjct: 246 DAVLGFKAWAEFSSNRLQKLQLQLNNTQLHWSQL-GQDYLWKINSGLVQFTNTNDAWLLD 304 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346 Y L + F+ +G DL + + + L Sbjct: 305 SYNLDIES--NQKKMQGLNVQGHGTAASAYFALDGVNIK-DLMPLYLLRSDLQAKTINSL 361 Query: 347 KKDDIQYSVNKKEEKDNSHDK 367 D+ ++ NS DK Sbjct: 362 SAFDLNARLDDFSLFKNSADK 382 >gi|87124037|ref|ZP_01079887.1| hypothetical protein RS9917_10516 [Synechococcus sp. RS9917] gi|86168606|gb|EAQ69863.1| hypothetical protein RS9917_10516 [Synechococcus sp. RS9917] Length = 1464 Score = 66.4 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 34/286 (11%), Positives = 91/286 (31%), Gaps = 12/286 (4%) Query: 31 DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 + E Q + +G + + + + R+ ++ I GL+++ Sbjct: 30 RLKPSLESQFSKPLGHPLEIGPFQGLRPW---GLAIGPSRVLPGLKDQSKASISGLTLQL 86 Query: 91 EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIK 150 + L L V + + ++ +++G W S+ + L+ R+K Sbjct: 87 DPLASLRRWRPVAVVSLRGARVDLRRNAQGAY-WVPGPSSGGKPPKLDLQLKLQDPARLK 145 Query: 151 IIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF 210 I + ++ ++ + ++ +++ +G V + G + + + Sbjct: 146 I-QPAGLTLSADGRASVHLAENWADVALKVALPQ-QGRVSLKARGRWVKPQLHLQTRLER 203 Query: 211 PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270 L PLA+ I L W++ + +G S+ G L+ + + Sbjct: 204 VRLEPFQGLLPATMPLAFRGQIGGDLRLSWSQGRAGCAGALSLVGLEVSGKPLQSALRNP 263 Query: 271 RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN 316 + + D + + + V ++ L Sbjct: 264 QW--RLRCRDQRLSLPASTWRYGA----YQASLSGHVDLNQALDLK 303 >gi|325279093|ref|YP_004251635.1| hypothetical protein Odosp_0360 [Odoribacter splanchnicus DSM 20712] gi|324310902|gb|ADY31455.1| hypothetical protein Odosp_0360 [Odoribacter splanchnicus DSM 20712] Length = 791 Score = 66.4 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 51/425 (12%), Positives = 123/425 (28%), Gaps = 61/425 (14%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 ++L +V++ + + + + ++G++I +KG + I+I Sbjct: 14 KILKISTITVAVLVAVFIIIACIFPP-IAKNYINKHSKELIGRQINIKG-LYINIFTG-Y 70 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL----------- 112 D ++ + D + LS+ LL+ E+R+ + + P + Sbjct: 71 ARITDFQLLEANDLDTFVSFDTLSVDMSLHRLLANEVRINHISLTNPSVKVLQQGSEFNF 130 Query: 113 -------------------------NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGG 147 + + +T + L I ++GG Sbjct: 131 DDLLALGSTDTLSADSPAAQPVASSTLQSPASDSLSPASPATTSANPLAIALYNISIQGG 190 Query: 148 RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207 I D E + V+ + + LQI + + ++ G+ + + Sbjct: 191 HILYKDLERNSVWQMENFGLQI----PGVYFSGQNTDVGIALNFNDGGHL-QTAIQYNME 245 Query: 208 ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA 267 A + ++ + P+ P + D + + L + + Sbjct: 246 AGNYLLDIDLT-NFSIAPIQ-PYLTDFT-RISTIGGILNTHLNIEGNAEHVTELVVRGNL 302 Query: 268 KKSRLSGNFKISDGNVRISR--YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 + LS + +++I P + N V+ + ++G +M Sbjct: 303 GINHLSLADASHKEVLATDSIYIDMETINPGKAIFHFNTIAVN-GIKTGFELRKDG-NTM 360 Query: 326 HDLNET-------DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE---NFSG 375 DL E+ D + S + + + FS Sbjct: 361 SDLFPETPEDTVRGAAEQTPAAGPQTTATAPDFKVSTFRINNSLFTFKDQTLRHPFTFSL 420 Query: 376 DKMIL 380 + + L Sbjct: 421 ENINL 425 >gi|119503733|ref|ZP_01625815.1| hypothetical protein MGP2080_01381 [marine gamma proteobacterium HTCC2080] gi|119460241|gb|EAW41334.1| hypothetical protein MGP2080_01381 [marine gamma proteobacterium HTCC2080] Length = 577 Score = 66.4 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 85/244 (34%), Gaps = 13/244 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + L +G L ++V+VG +P+FID ++Q ++ V+G + + + P Sbjct: 1 MLVFLYVVGALIALVVVGLVLLPMFIDEQAVINLAQQQFKEATAGELVVEGNVDLGLFPE 60 Query: 62 PSVFFKDIRIDQKEDGSF----ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 + + ID +G+ + L +LSG V D+++ + + Sbjct: 61 LKLNLGNTTIDLPPQTEDGSRLVVTAQGVDIGLSVLAILSGSDEVGDVHLSGADVQLLDN 120 Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 + + + N+ + I +KG D +S + D +++ + F + Sbjct: 121 TGALQTQLTITDLVAQGLNMAGQPIGLKGALAVAADPQSQPIQIRFDGAVRVPSTFDQVT 180 Query: 178 SPLSIDSIKGSV------IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 I G++ GT + + N P L + Sbjct: 181 LDGFSTEIIGALSAPVKTELSGTAKLSPLSADLDLNVNSPGGVIDADLNYNVAASP---Q 237 Query: 232 IDLF 235 IDL Sbjct: 238 IDLD 241 >gi|254509638|ref|ZP_05121705.1| hypothetical protein RKLH11_170 [Rhodobacteraceae bacterium KLH11] gi|221533349|gb|EEE36337.1| hypothetical protein RKLH11_170 [Rhodobacteraceae bacterium KLH11] Length = 1130 Score = 66.4 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 86/338 (25%), Gaps = 37/338 (10%) Query: 6 LIGLGFLFSVVLVGAFTVPLFID-----WTDFREDFERQATLIVGKKIAVK-GGIKIHI- 58 L L +F +V + T + I R+ E + +G + ++ G + I Sbjct: 34 LWALRGVFVLVFLALITGFMVIGQHVHVPAWVRDRVETRLDQALGG-VQIRFGDVSFIIH 92 Query: 59 -LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 P + D+RI +++ L PLL G +R + + + Sbjct: 93 EGWRPRLQLTDVRISDAAGQQ-IAEVADLRASLAMRPLLRGHVRPKRIILQGAQIALTRG 151 Query: 118 SKGVSN-------------------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 G + + L + + + D + Sbjct: 152 VDGALSLTVGAGSAPVGQARNLAQLIEASDAVFQSPALSALSSVELDAITLDYRDLRLGR 211 Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKG-----SVIAEGTGNFDNKRSAFKITANFP-- 211 + L ++ + + + G ++ A T + + F I+ Sbjct: 212 SWVLDGGHILATRNAREVRLATGFSVLAGRDYVSTIEANYTSALGSPAAQFGISITDLPA 271 Query: 212 -AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270 + L PI L G + ++ + K Sbjct: 272 EDIGGHSPALAWMQVLRTPISGALRGRVDAQGALGPVFATLNLGAGAVQPTPETRPIKFD 331 Query: 271 RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308 F + + ++ + K + Sbjct: 332 GARTYFTYDPKHEVLDFNEVSINSAWGKVQAEGKAFLQ 369 >gi|121599403|ref|YP_991839.1| hypothetical protein BMASAVP1_A0490 [Burkholderia mallei SAVP1] gi|124385683|ref|YP_001027094.1| hypothetical protein BMA10229_A1109 [Burkholderia mallei NCTC 10229] gi|254178934|ref|ZP_04885588.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399] gi|254202604|ref|ZP_04908967.1| conserved hypothetical protein [Burkholderia mallei FMH] gi|254207943|ref|ZP_04914293.1| conserved hypothetical protein [Burkholderia mallei JHU] gi|254355917|ref|ZP_04972195.1| conserved hypothetical protein [Burkholderia mallei 2002721280] gi|121228213|gb|ABM50731.1| conserved hypothetical protein [Burkholderia mallei SAVP1] gi|124293703|gb|ABN02972.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229] gi|147746851|gb|EDK53928.1| conserved hypothetical protein [Burkholderia mallei FMH] gi|147751837|gb|EDK58904.1| conserved hypothetical protein [Burkholderia mallei JHU] gi|148024892|gb|EDK83070.1| conserved hypothetical protein [Burkholderia mallei 2002721280] gi|160694848|gb|EDP84856.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399] Length = 1397 Score = 66.4 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 50 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + E I ++GG ++ D + D L+ ++I+ ++ +++ + + Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 223 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 G +F + + N + P+ P + Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265 >gi|289676061|ref|ZP_06496951.1| hypothetical protein PsyrpsF_22495 [Pseudomonas syringae pv. syringae FF5] Length = 376 Score = 66.4 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 101/307 (32%), Gaps = 19/307 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A+ +G +++ G ++ F Sbjct: 13 RWGLSLCALILVLAALYVSLGRQLTPLVAEYRVDVETRASSALGIPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + D+ + + G+ +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVLLAHDVMVGE---GASALRLDRVRVVPDLWESLLARDVRIAHLEVDGLQFSLRQDKD 128 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 G + D + + ++ ++ D + + A Sbjct: 129 GAWSVQGLPVHNDSPFDP---EQVLRQMQMVAHLSLLDSQVTVQPFDA---APLTLTYVN 182 Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235 LS+D+ + + D + A + + K+ + L + + Sbjct: 183 LSLDTGGYAQRLDARLTLPDGQPVALNVRSRIQASQWKDGEADVYASLPQSDWAKWLPKS 242 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 W + G ++ + ++ ++ G + + I L + Sbjct: 243 LTREWTLSKLQAGGEVWLSWGKGTVQSVTTRLNAPQVKGVYAGRKPS-TIDNLALNAWFA 301 Query: 296 NSSTDED 302 + T D Sbjct: 302 RTDTGFD 308 >gi|255014201|ref|ZP_05286327.1| outer membrane assembly protein [Bacteroides sp. 2_1_7] Length = 1099 Score = 66.4 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 40/335 (11%), Positives = 97/335 (28%), Gaps = 42/335 (12%) Query: 10 GFLFSVVLVGAFTVPL-FIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL---PFPSVF 65 G F + L+G + + + + + + +++ P+ V Sbjct: 19 GIFFILPLIGVGILKWAVLPPEKLTPLVVEKTNEFIEAHLECE-RVELTYFETYPYLGVK 77 Query: 66 FKDIRIDQK-------------EDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPH 111 + R+ + + L SG++ + + +D Sbjct: 78 LTNGRLISNLAEDSIGYQEDLMIPSDSLLSFKKAIVVFNPTDYLFSGKVTIPRVIMDSIR 137 Query: 112 LNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 Y++ +G +NW +S MD + + L+++H+ G D++ D + Sbjct: 138 FYGYVNEEGKANWEIYQSEMDSVDESSSSPLPKIDLQQVHITNGHFVYDDRQQDLYTAID 197 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL---K 220 L I + L +++ S++ + A + + + Sbjct: 198 GFFLHIDGLLTQRGNKLDVETGSSSIVFRSPSYSLANKLALRFKGRLLLADGLRRIGLRD 257 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL------------NLELSAK 268 +L P D F + F + L + L+ Sbjct: 258 AELLVNNLPFTADGFMVPATEDNPSRIDMTFGLKVSDMNDLLHFIPDEYFKDRDKTLAEG 317 Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 + L G+ + G+ + L + + S Sbjct: 318 RIILEGDIRGELGDSIVPTVNLCCKIEDGSYHVKG 352 >gi|301309341|ref|ZP_07215283.1| putative outer membrane assembly protein [Bacteroides sp. 20_3] gi|300832430|gb|EFK63058.1| putative outer membrane assembly protein [Bacteroides sp. 20_3] Length = 1099 Score = 66.4 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 40/335 (11%), Positives = 97/335 (28%), Gaps = 42/335 (12%) Query: 10 GFLFSVVLVGAFTVPL-FIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL---PFPSVF 65 G F + L+G + + + + + + +++ P+ V Sbjct: 19 GIFFILPLIGVGILKWAVLPPEKLTPLVVEKTNEFIEAHLECE-RVELTYFETYPYLGVK 77 Query: 66 FKDIRIDQK-------------EDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPH 111 + R+ + + L SG++ + + +D Sbjct: 78 LTNGRLISNLAEDSIGYQEDLMIPSDSLLSFKKAIVVFNPTDYLFSGKVTIPRVIMDSIR 137 Query: 112 LNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 Y++ +G +NW +S MD + + L+++H+ G D++ D + Sbjct: 138 FYGYVNEEGKANWEIYQSEMDSVDESSSSPLPKIDLQQVHITNGHFVYDDRQQDLYTAID 197 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL---K 220 L I + L +++ S++ + A + + + Sbjct: 198 GFFLHIDGLLTQRGNKLDVETGSSSIVFRSPSYSLANKLALRFKGRLLLADGLRRIGLRD 257 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL------------NLELSAK 268 +L P D F + F + L + L+ Sbjct: 258 AELLVNNLPFTADGFMVPATEDNPSRIDMTFGLKVSDMNDLLHFIPDEYFKDRDKTLAEG 317 Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 + L G+ + G+ + L + + S Sbjct: 318 RIILEGDIRGELGDSIVPTVNLCCKIEDGSYHVKG 352 >gi|157374970|ref|YP_001473570.1| hypothetical protein Ssed_1831 [Shewanella sediminis HAW-EB3] gi|157317344|gb|ABV36442.1| protein of unknown function DUF748 [Shewanella sediminis HAW-EB3] Length = 1013 Score = 66.4 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 50/408 (12%), Positives = 107/408 (26%), Gaps = 57/408 (13%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61 R + L + VP ++ Q ++ + + + ++ I PF Sbjct: 23 RYLSALLASYLFFAGILGLVVPYAVEK-----QLPVQLGAMLKRPVQLD---EVKINPFT 74 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS--- 117 +V RID+ + G + L+ F L +G I + + ++ P + Sbjct: 75 LNVSLTGFRIDETDHGD-FIGFDKLNFELCFWHSLFNGAISIDHVTLNAPFVFIERLNSK 133 Query: 118 --------------SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 +K + + +VI+E + + + D ++ Sbjct: 134 QKIQFNFSDILAELAKSSEVPQAPPDKANALPHVIVENLSIANADLLYSDNVTNGQIHYP 193 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGT---------------GNFDNKRSAFKITA 208 +NL++ A + S+ G N + I Sbjct: 194 AVNLKVKAFDTLNEIASAASGNHFSIHFVGDEGGEISTQGQIQVSPLNIVGELKLTAIKL 253 Query: 209 NFPAKNKAISLKIQLFPLAYPIIIDLFGNL-----FWNEKQPIYSGVFSVAG-DFSKLLN 262 + + +L + G FS+ FS Sbjct: 254 PQFWSFISDDFQAKLDTGQLNFKSHFEITSHATSNQAPIQVVTNQGAFSLENILFSHEQR 313 Query: 263 LELSAKKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321 ++ L G + D V + R + + N+ D L S Sbjct: 314 PLMTLPLLALEGIELNLEDKLVVVERLHSEKLDLNAGITPQG-----IDIIPLFMPSFIS 368 Query: 322 AESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369 + + D E E + + +++ K Sbjct: 369 KADDSESKQVD--EPEANEQTPWSATLGGVSVKDYALNLQESLLTKNT 414 >gi|90417412|ref|ZP_01225336.1| AsmA family superfamily protein [marine gamma proteobacterium HTCC2207] gi|90330746|gb|EAS46021.1| AsmA family superfamily protein [marine gamma proteobacterium HTCC2207] Length = 625 Score = 66.4 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 96/301 (31%), Gaps = 14/301 (4%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 + +L + L + L+ + + +D D + + + A G ++++KG + LP Sbjct: 6 KWLLKTVASLLVIALIAMSYLLIAMDPNDLKPEIKAAAASQ-GLELSLKGNLSWQFLPQI 64 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL---------SGEIRVFDMYIDQPHLN 113 V + + + S KIE L + + LL S ++ + I + Sbjct: 65 GVVVEKVEFAHRTVASG--KIEELRLSVSWTELLIIGLSSGLSSDQVPAGSIAISNATIL 122 Query: 114 F-YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS-DLNLQISA 171 L +R + ++ ++ V+ D L+ ++ Sbjct: 123 LAELVPNTFPIQLKRFNANVNNFSLSGDRFSVEASAQVFSGLTLDLDAALALQIDTNTGV 182 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 +S L + + + + +++N + FPL Sbjct: 183 IENLTVSDLEASVDGMELRGQFVTGNNFATAQGSLSSNRFDLKHLVKTIGMSFPLVKLPN 242 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 + L ++ + F+ L+++ + I++ +R+S + Sbjct: 243 MASKEALTAVSWNSSFNTDMNGFSTFNTQLDIDSQVLTIASKVDHSINNLYMRVSGEQFD 302 Query: 292 S 292 Sbjct: 303 I 303 >gi|150008451|ref|YP_001303194.1| outer membrane assembly protein [Parabacteroides distasonis ATCC 8503] gi|149936875|gb|ABR43572.1| outer membrane assembly protein [Parabacteroides distasonis ATCC 8503] Length = 1099 Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 40/335 (11%), Positives = 97/335 (28%), Gaps = 42/335 (12%) Query: 10 GFLFSVVLVGAFTVPL-FIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL---PFPSVF 65 G F + L+G + + + + + + +++ P+ V Sbjct: 19 GIFFILPLIGVGILKWAVLPPEKLTPLVVEKTNEFIEAHLECE-RVELTYFETYPYLGVK 77 Query: 66 FKDIRIDQK-------------EDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPH 111 + R+ + + L SG++ + + +D Sbjct: 78 LTNGRLISHLAEDSIGYQEDLMIPSDSLLSFKKAIVVFNPTDYLFSGKVTIPRVIMDSIR 137 Query: 112 LNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 Y++ +G +NW +S MD + + L+++H+ G D++ D + Sbjct: 138 FYGYVNEEGKANWEIYQSEMDSVDESSSSPLPKIDLQQVHITNGHFVYDDRQQDLYTAID 197 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL---K 220 L I + L +++ S++ + A + + + Sbjct: 198 GFFLHIDGLLTQRGNKLDVETGSSSIVFRSPSYSLANKLALRFKGRLLLADGLRRIGLRD 257 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL------------NLELSAK 268 +L P D F + F + L + L+ Sbjct: 258 AELLVNNLPFTADGFMVPATEDNPSRIDMTFGLKVSDMNDLLHFIPDEYFKDRDKTLAEG 317 Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 + L G+ + G+ + L + + S Sbjct: 318 RIILEGDIRGELGDSIVPTVNLCCKIEDGSYHVKG 352 >gi|134280031|ref|ZP_01766742.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei 305] gi|134248038|gb|EBA48121.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei 305] Length = 1372 Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 25 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 79 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 80 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 139 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + E I ++GG ++ D + D L+ ++I+ ++ +++ + + Sbjct: 140 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 198 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 G +F + + N + P+ P + Sbjct: 199 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 240 >gi|53726217|ref|YP_103894.1| hypothetical protein BMA2335 [Burkholderia mallei ATCC 23344] gi|52429640|gb|AAU50233.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344] Length = 1368 Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 21 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 75 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 76 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 135 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + E I ++GG ++ D + D L+ ++I+ ++ +++ + + Sbjct: 136 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 194 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 G +F + + N + P+ P + Sbjct: 195 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 236 >gi|254468812|ref|ZP_05082218.1| conserved hypothetical protein [beta proteobacterium KB13] gi|207087622|gb|EDZ64905.1| conserved hypothetical protein [beta proteobacterium KB13] Length = 1278 Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 39/345 (11%), Positives = 117/345 (33%), Gaps = 12/345 (3%) Query: 6 LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-PFPSV 64 +I L ++++ A+ L + +++ E G + +K + + P Sbjct: 21 IISLILTTALIVFLAYQFYLIPNVESYKQKIENFIENETGGEAEIK-TLNVLWNITNPKF 79 Query: 65 FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124 ++ I K++ K+ + +L L+ E + + + + + Sbjct: 80 QIRNFSITDKDNNKT-IKLNAIDFEISWLSLIKFEPVLNQIIVGDIDILVERTLDNKLKV 138 Query: 125 F-----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIIS 178 + ++ + +I + G++ D D + +S +N ++ Sbjct: 139 AGIEIIESSNSNLSDWLLNQSEIRIINGKVTWRDHARDAEDLIISAINFTYTSPAYLSYL 198 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 +++++GT F + + + + + A+ + + Sbjct: 199 D-RHKFNLNALLSQGTKEKIYLNGFFDLDKISRLEEVNAKINLNI-SQAFLTSFKPWVDY 256 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS-DGNVRISRYKLQSILPNS 297 ++ KQ ++ + ++ ++ GNF + ++RI+ +I N Sbjct: 257 PFDLKQGFGDLKLNMTLEKERIGEIKTLFYLENFVGNFNKDQNQHIRINELSGNAIFENH 316 Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342 + + + LN +G E + ++ + F+ + + K Sbjct: 317 DQRKKIAATNLNLKTDRLNVKNSGFEIISKNDKAESFKLKLNQLK 361 >gi|67642298|ref|ZP_00441056.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4] gi|126450123|ref|YP_001081745.1| hypothetical protein BMA10247_2216 [Burkholderia mallei NCTC 10247] gi|251766637|ref|ZP_02264514.2| conserved hypothetical protein [Burkholderia mallei PRL-20] gi|126242993|gb|ABO06086.1| conserved hypothetical protein [Burkholderia mallei NCTC 10247] gi|238523423|gb|EEP86861.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4] gi|243065333|gb|EES47519.1| conserved hypothetical protein [Burkholderia mallei PRL-20] Length = 1372 Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78 +P ++R E + + ++ + G + H P V + I ++ Sbjct: 25 YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 79 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130 + + + L + + +D P L + G Sbjct: 80 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 139 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + E I ++GG ++ D + D L+ ++I+ ++ +++ + + Sbjct: 140 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 198 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 G +F + + N + P+ P + Sbjct: 199 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 240 >gi|296391561|ref|ZP_06881036.1| hypothetical protein PaerPAb_25563 [Pseudomonas aeruginosa PAb1] Length = 449 Score = 66.1 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 95/335 (28%), Gaps = 38/335 (11%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M + + + L LV L I R +Q ++ +I P Sbjct: 1 MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLR-VANQQLAQYATVPARLE---RIEFNP 56 Query: 61 F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 F + +R+ +++ + L + L ++ + D ++ PH K Sbjct: 57 FSLELTLWGLRLGDEKN--PQLAFRRLYANLQLDSLWKRQLHLADAELEGPHTELLFDEK 114 Query: 120 GVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 G N + +++I + G + D + D + Sbjct: 115 GQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPV---DFSFDP 171 Query: 170 SARFLNIISPLSIDSIKGSVIA----EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 L+ +S L D K +++A G +++ + IT+ K I LK Sbjct: 172 LGFELHNLSTLPDDGAKMTLVATGPNGGRLDWEGDLTLVPITSRGHLSVKDIQLKAWWPY 231 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN---------- 275 + + L + K + G Sbjct: 232 VRDNAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSINSPQGKPLAKLASLDV 291 Query: 276 ----FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + Q + ++ ++D + Sbjct: 292 AATTLDLAKQEVVLGEVRSQGLEAWAAREKDGQLD 326 >gi|313202411|ref|YP_004041069.1| hypothetical protein MPQ_2693 [Methylovorus sp. MP688] gi|312441727|gb|ADQ85833.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 1201 Score = 66.1 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 43/360 (11%), Positives = 121/360 (33%), Gaps = 39/360 (10%) Query: 2 LRRVLIGLGF-LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +R +L+ F +F+ V++ R A + + +V+ + P Sbjct: 5 IRTLLLTTPFKIFAGVIIAYLLFAYLAVDPLARRILPWFAENKLASQASVE---HVKFDP 61 Query: 61 -FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + +++ +++G+ + + L + E L R+ D+ + PH+ + + Sbjct: 62 LRLILTIDQLKL-NQKNGAPLASFDRLYINLETSGLFRFAWRIKDIRLTAPHVAVEVGAD 120 Query: 120 GVSNWFQR---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 G NW + + ++++ I ++GG + +++ Q + L+ L + Sbjct: 121 GRLNWADLIARLNEDKDDTPSTSMPRLLIDHILIEGGDVAYVERNRPQPFELALQPLGLE 180 Query: 171 ARFLNI--------ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--------FPAKN 214 L+ + + + GS+ +G + S + K+ Sbjct: 181 LDGLSTLPEDRGDYLIVAKLPADGGSLKWKGDIGLNPLVSQGVLELQGIKLAPLMQIVKH 240 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQP-----IYSGVFSVAGDFSKLLNLELSAKK 269 +A+ +++ L + +++ P + ++ +++ A+ Sbjct: 241 QALPVRLTQGELQSRLTYSFAMVKGADQQDPTPEAIVQDLSLTLENVAAEVQGQHGPAQL 300 Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE-NGAESMHDL 328 ++ + S K + + K + Q + L + +DL Sbjct: 301 HL--KQVSVAIPRLDFSMRKGTELTFKNMRLGLQKLVLQQAKTPLFQLDAIDVQGIDYDL 358 >gi|218259920|ref|ZP_03475435.1| hypothetical protein PRABACTJOHN_01096 [Parabacteroides johnsonii DSM 18315] gi|218224837|gb|EEC97487.1| hypothetical protein PRABACTJOHN_01096 [Parabacteroides johnsonii DSM 18315] Length = 805 Score = 66.1 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 46/423 (10%), Positives = 120/423 (28%), Gaps = 56/423 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLF---------IDWTDFREDFERQATLIVGKKIAVKG 52 ++R + V+ F +P + QA + + + Sbjct: 1 MKRKKKIPTIIVLAVVTLIFILPAIGFSILNWGVLPPEKLTPLVIEQANKFIDAHLDCE- 59 Query: 53 GIKIHIL---PFPSVFFKDIRIDQKE-------------DGSFESKIEGLSMRAEFLPLL 96 +++ P+ V + + ++ + L L Sbjct: 60 RVELTYFETYPYLGVKLTNGHLISHAAEDSTAHEEELAIPSDSLLAFSRATLSLQPLDYL 119 Query: 97 SG-EIRVFDMYIDQPHLNFYLSSKGVSNWF---------QRKSTMDMIHNVILEKIHVKG 146 G +I + D I+ P +++ G +NW + + + + L+K+ + G Sbjct: 120 FGGKITIKDFSIENPRFYGFVNKDGHANWDIYESETDSTEANAGKKPLPPIDLQKVRIYG 179 Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKI 206 G D+++D + +++ + L ++ S++ + ++ Sbjct: 180 GHFTYDDRQTDLFTEIGGFFVRLDGSLAGGANTLDFETGCSSLLFSNPTYTLKNDLSLRL 239 Query: 207 TANFPAKNKAISLKI---QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL-- 261 + S+ + +L P D F +++ + L Sbjct: 240 KSRLVLAEHYNSITLKDAELMVNNLPFTADGAIRHFPEDQRTRIDMDMGLKISDMNDLLK 299 Query: 262 ----------NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE 311 + L+ + G+ G+ I L + N S + + Sbjct: 300 FIPDAYFQNRDKTLAEGSILVEGSIHGFLGDSIIPNVNLCCKIENGSYHIKD----IKQG 355 Query: 312 ENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371 + L + ++ F E+ K + D N + + + Sbjct: 356 IDTLEMDLDI-HLNGPFPDSSFVSLEQLTMKGLNTSLDMQAKVTNLFKNPSVRAGMKGKV 414 Query: 372 NFS 374 +F+ Sbjct: 415 DFT 417 >gi|298376298|ref|ZP_06986254.1| outer membrane assembly protein [Bacteroides sp. 3_1_19] gi|298267335|gb|EFI08992.1| outer membrane assembly protein [Bacteroides sp. 3_1_19] Length = 1099 Score = 66.1 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 40/335 (11%), Positives = 97/335 (28%), Gaps = 42/335 (12%) Query: 10 GFLFSVVLVGAFTVPL-FIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL---PFPSVF 65 G F + L+G + + + + + + +++ P+ V Sbjct: 19 GIFFILPLIGVGILKWAVLPPEKLTPLVVEKTNEFIEAHLECE-RVELTYFETYPYLGVK 77 Query: 66 FKDIRIDQK-------------EDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPH 111 + R+ + + L SG++ + + +D Sbjct: 78 LTNGRLISHLAEDSIGYQEDLMIPSDSLLSFKKAIVVFNPTDYLFSGKVTIPRVIMDSIR 137 Query: 112 LNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 Y++ +G +NW +S MD + + L+++H+ G D++ D + Sbjct: 138 FYGYVNEEGKANWEIYQSEMDSVDESSSSPLPKIDLQQVHITNGHFVYDDRQQDLYTAID 197 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL---K 220 L I + L +++ S++ + A + + + Sbjct: 198 GFFLHIDGLLTQRGNKLDVETGSSSIVFRSPSYSLANKLALRFKGRLLLADGLRRIGLRD 257 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL------------NLELSAK 268 +L P D F + F + L + L+ Sbjct: 258 AELLVNNLPFTADGFMVPATEDNPSRIDMTFGLKVSDMNDLLHFIPDEYFKDRDKTLAEG 317 Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 + L G+ + G+ + L + + S Sbjct: 318 RIILEGDIRGELGDSIVPTVNLCCKIEDGSYHVKG 352 >gi|253564362|ref|ZP_04841819.1| outer membrane assembly protein [Bacteroides sp. 3_2_5] gi|251948138|gb|EES88420.1| outer membrane assembly protein [Bacteroides sp. 3_2_5] gi|301161358|emb|CBW20898.1| putative exported protein [Bacteroides fragilis 638R] Length = 988 Score = 66.1 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 42/341 (12%), Positives = 108/341 (31%), Gaps = 41/341 (12%) Query: 3 RRVLIGLGFLFSVVL-----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ L G VL AF + + A + + ++ +++ Sbjct: 6 KKTLKISGITLGTVLLVLLVAIAFVINFIVTPKKLTPVVLDAANQTLNAHLDME-SVELT 64 Query: 58 I---LPFPSVFFKDIRIDQKE-------DGSFESKIEGLSMRAEFLPLLS-GEIRVFDMY 106 P + K+ + K + + + L+ I V ++ Sbjct: 65 FFSTFPQFGLKVKNGSLVSKALNDSSWCKTDSLLSFKECVLTVNPIAYLTENRIVVHNLS 124 Query: 107 IDQPHLNFYLSSKGVSNWFQRKSTMDMIH----------NVILEKIHVKGGRIKIIDQES 156 +++ + Y + G +NW ++++D I + + I +K + D+ + Sbjct: 125 LEEVAVYAYRNKTGKANWEVTRASVDTIPADTASTDFNSEIDIRNIELKHANLVFDDRNT 184 Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216 D + D NL++ IS L + +++ G + A + + + Sbjct: 185 DIYSRIDDANLKLRLSLTKGISTLGLKFDNKNILFWQQGELLVNKIATSLRTDIMVDRQT 244 Query: 217 ISLKI-QLFPLAYPIIIDLFGNLFWNEKQPIY--SGVFSVAGDFSKL----------LNL 263 K+ I +D+ G + + + + + Sbjct: 245 AVWKLKDTELDVNGIRLDVNGAFRRDTVAKTIGMDLEYGLHAPSMETVLRMIPKSYVKDS 304 Query: 264 ELSA-KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 ++SA + +SG + G+ ++ L+ + +S Sbjct: 305 KVSAKGEVTVSGRVRGVYGDKKLPAVSLKIGIKEASAQYKG 345 >gi|94268152|ref|ZP_01291103.1| hypothetical protein MldDRAFT_2692 [delta proteobacterium MLMS-1] gi|93451710|gb|EAT02483.1| hypothetical protein MldDRAFT_2692 [delta proteobacterium MLMS-1] Length = 625 Score = 66.1 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 81/281 (28%), Gaps = 42/281 (14%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV-FFKD----IRI 71 L+ A P + + + + + + P V + R+ Sbjct: 145 LLTALLAPRL---------LADYFSRQLERPVTIA---RADWQPVNRVLTLHNGIVGPRL 192 Query: 72 DQKEDG-SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 D +D L R L G + ++QP ++ + G N Sbjct: 193 DNPDDRIDPLLSFRTLQARIRPGNLWHGGPLFKTLRLEQPFIHLHRDRTGHYNLAPDLFL 252 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESD----QVYFLSDLNLQISARFLNIISPLSIDSIK 186 + + + ++ GR+ D + ++N Q+ + Sbjct: 253 LGGRLP---DPVEIRDGRLFYSDHRGGDDRRYQVEIREINGQLQPIASRG------SGSR 303 Query: 187 GSVIAEGTG-NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 ++ G G + ++TA + L + + + +L L Sbjct: 304 VALELGGIGPEAAGVKLRGELTAGRSGAEDQLQL-----VVNHWPLAELAPYLQPLLGHT 358 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 I +G+ + F+ EL +K ++++ + Sbjct: 359 IAAGLLDMQASFTPGPGTELHVRK-----QLQLTNLRLTSP 394 >gi|60679838|ref|YP_209982.1| hypothetical protein BF0245 [Bacteroides fragilis NCTC 9343] gi|60491272|emb|CAH06020.1| putative exported protein [Bacteroides fragilis NCTC 9343] Length = 988 Score = 66.1 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 35/287 (12%), Positives = 88/287 (30%), Gaps = 30/287 (10%) Query: 3 RRVLIGLGFLFSVVL-----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ L G VL AF + + A + + ++ +++ Sbjct: 6 KKTLKISGITLGTVLLVLLVAIAFVINFIVTPKKLTPVVLDAANQTLNAHLDME-SVELT 64 Query: 58 I---LPFPSVFFKDIRIDQKE-------DGSFESKIEGLSMRAEFLPLLS-GEIRVFDMY 106 P + K+ + K + + + L+ I V ++ Sbjct: 65 FFSTFPQFGLKVKNGSLVSKALNDSSWCKTDSLLSFKECVLTVNPIAYLTENRIVVHNLS 124 Query: 107 IDQPHLNFYLSSKGVSNWFQRKSTMDMIH----------NVILEKIHVKGGRIKIIDQES 156 +++ + Y + G +NW +++ D I + + I +K + D+ + Sbjct: 125 LEEVAVYAYRNKAGKANWEVTRASADTIPADTASTDFNSEIDIRNIELKHANLVFDDRNT 184 Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216 D + D NL++ IS L + +++ G + A + + + Sbjct: 185 DIYSRIDDANLKLRLSLTKGISTLGLKFDNKNILFWQQGELLVNKIATSLRTDIMVDRQT 244 Query: 217 ISLKI-QLFPLAYPIIIDLFGNLFWNEKQPIY--SGVFSVAGDFSKL 260 K+ I +D+ G + + + + Sbjct: 245 AVWKLKDTELDVNGIRLDVNGTFRRDTVAKTIGMDLEYGLHAPSMET 291 >gi|265764970|ref|ZP_06093245.1| outer membrane assembly protein [Bacteroides sp. 2_1_16] gi|263254354|gb|EEZ25788.1| outer membrane assembly protein [Bacteroides sp. 2_1_16] Length = 988 Score = 66.1 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 107/341 (31%), Gaps = 41/341 (12%) Query: 3 RRVLIGLGFLFSVVL-----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ L G VL AF + + A + + ++ +++ Sbjct: 6 KKTLKISGITLGTVLLVLLVAIAFVINFIVTPKKLTPVVLDAANQTLNAHLDME-SVELT 64 Query: 58 I---LPFPSVFFKDIRIDQKE-------DGSFESKIEGLSMRAEFLPLLS-GEIRVFDMY 106 P + K+ + K + + + L+ I V ++ Sbjct: 65 FFSTFPQFGLKVKNGSLVSKALNDSSWCKIDSLLSFKECVLTVNPIAYLTENRIVVHNLS 124 Query: 107 IDQPHLNFYLSSKGVSNWFQRKSTMDMIH----------NVILEKIHVKGGRIKIIDQES 156 +++ + Y + G +NW +++ D I + + I +K + D+ + Sbjct: 125 LEEVAVYAYRNKAGKANWEVTRASTDTIPADTASTDFNSEIDIRNIELKHANLVFDDRNT 184 Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216 D + D NL++ +S L + +++ G + A + + + Sbjct: 185 DIYSRIDDANLKLRLSLTKGVSTLGLKFDNKNILFWQQGELLVNKIATSLRTDIMVDRQT 244 Query: 217 ISLKI-QLFPLAYPIIIDLFGNLFWNEKQPIY--SGVFSVAGDFSKL----------LNL 263 K+ I +D+ G + + + + + Sbjct: 245 AVWKLKDTELDVNGIRLDVNGAFRRDTVAKTIGMDLEYGLHAPSMETVLRMIPKSYVKDS 304 Query: 264 ELSA-KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 ++SA + +SG + G+ ++ L+ + +S Sbjct: 305 KVSAKGEVTVSGRVRGVYGDKKLPAVSLKIGIKEASAQYKG 345 >gi|332558410|ref|ZP_08412732.1| hypothetical protein RSWS8N_05125 [Rhodobacter sphaeroides WS8N] gi|332276122|gb|EGJ21437.1| hypothetical protein RSWS8N_05125 [Rhodobacter sphaeroides WS8N] Length = 1094 Score = 66.1 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 29/322 (9%), Positives = 77/322 (23%), Gaps = 31/322 (9%) Query: 16 VLVGAFTVPLFIDWTDFREDFERQATLIVG--KKIAVKG-GIKIHILPFPSVFFKDIRID 72 AFT + E + + +++ G + + P + D+R+ Sbjct: 38 FATLAFTGRPLPLPGWAVTEAETRINRALEPALSVSLGGLVLTVEPNWIPRLRLDDVRLR 97 Query: 73 QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST-- 130 Q + + + + L G + + + ++ + G ++ + Sbjct: 98 QADG-RTLVTLPEARVVFDRGAALRGALHPKTITLSGARISLRRLADGRFDFAMGEQGGT 156 Query: 131 ----------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 L +I +G + + D+ + + + D L + Sbjct: 157 FRIASYAELRETVDRLFAQPVLADLRRIEAEGTTLTLDDRRAGRTWQAGDGRLTLVNGPD 216 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK---------IQLFP 225 + + + A + A A ++ L Sbjct: 217 RRALEIGLTLLNSKGRAPAQALVTFVTTPGSPEARISATVDHVAAADIAAQAAPVAWLEV 276 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L + L + + R F G R+ Sbjct: 277 LDAALSGRFSAALDGEGRLTRLEAGLDSGEGALQPRPETRPIAFDRAGLAFAYDPGRERL 336 Query: 286 SRYKLQSILPNSSTDEDNKTKV 307 + +L+ + + Sbjct: 337 NLTRLEVQGRSIRLSAQGHAYL 358 >gi|330959314|gb|EGH59574.1| hypothetical protein PMA4326_12234 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 356 Score = 66.1 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 30/333 (9%), Positives = 93/333 (27%), Gaps = 27/333 (8%) Query: 6 LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65 L L L +++ +P + R+ + + + + + + + + Sbjct: 9 LWTLAALVVLLIALNIALPYLV-----RDYLNDKLADMGDYRGQIT-DVDLALWRG-AYR 61 Query: 66 FKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 K ++I + + + + + L + V + P +NF G +N Sbjct: 62 IKGLKIVKTDGKVPVPFVDAPMIELAVSWKSLWNDHAVVAEALFTDPQINFV---DGGNN 118 Query: 124 WFQRKSTMDMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 ++ + L ++ + G+I + S + + S L Sbjct: 119 RQASQTGQGTDWRTQLNKLLPITLNELRISNGKITFNNFSSTPKVTIDADQVNASFYNLT 178 Query: 176 IISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 + + + +G + + + +++ + + D Sbjct: 179 NVVDVEGNRDA---EFKGKARLLGHASLESTAKFDPFSNFEDFDFRLRATGIQLKKLNDF 235 Query: 235 F---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 G +N L + + + + + R + Sbjct: 236 SSAYGKFDFNAGNGDIVIEAQANKGQLSGYIKPLLRNVDVFNWQQDVENKDKGLFRSVWE 295 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 +++ S T N+ + L+ + + + Sbjct: 296 ALVGTSETVLKNQRENQFATRVDLSGNVHQQDI 328 >gi|239996883|ref|ZP_04717407.1| hypothetical protein AmacA2_20748 [Alteromonas macleodii ATCC 27126] Length = 1151 Score = 66.1 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 44/412 (10%), Positives = 109/412 (26%), Gaps = 58/412 (14%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFK 67 L ++ + + + + G+ AV+ I I PF + Sbjct: 13 LSTYLVLIYLTYALLIGVVTPAVLKAKLPNIVKENTGRDAAVE---DIAINPFLLKIEVT 69 Query: 68 DIRIDQK--------------EDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHL 112 + I + + +S+ F L + V + ID+P + Sbjct: 70 NFVIYPNIHSSNESEDNAVIQNQENHFFSVGNVSLDVGFWQSLFTFTPAVESLTIDEPFV 129 Query: 113 NFYLSSKGVSNW--------------------FQRKSTMDMIHNVILEKIHVKGGRIKII 152 + S+ ++ I + L + GR+ I Sbjct: 130 SIARLSESEDTQIFNFSDILTHVEKRSTKAPEEPNDTSEGQIPRITLRDFALNEGRVVIE 189 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212 D+ ++ + +L++ + + + S K + + Sbjct: 190 DKVTNTLLDYPELSVDLQDLDTHALISSSSVGNKNANPKSDKSESAQSKGKLAFNQYQFN 249 Query: 213 KNKAISLKIQLFP--LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270 A I + P+ + + P++S + + LS Sbjct: 250 LLTAEKGNIAIDGEFQLSPLKVTTDITINDVALTPLWSLSKDLIEADLVDGKINLSLHAE 309 Query: 271 RLSGN----FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + F + G ++ + + T K+ H Sbjct: 310 VFEQDTAFQFILERGEFGVNNLVFNADSSPA-TTGTAKSSQEIIAIPAFAI--------H 360 Query: 327 DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378 D+N E++ ++ D+++ S + + ++ + D Sbjct: 361 DIN----VNALEQQVSIAEVAFDNVRVSGLFDKSGLDLQRLFTPKSPAADAT 408 >gi|154492080|ref|ZP_02031706.1| hypothetical protein PARMER_01711 [Parabacteroides merdae ATCC 43184] gi|154087866|gb|EDN86911.1| hypothetical protein PARMER_01711 [Parabacteroides merdae ATCC 43184] Length = 1538 Score = 66.1 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 44/379 (11%), Positives = 111/379 (29%), Gaps = 43/379 (11%) Query: 2 LRRVLIGLGF--LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59 ++R+ I + +++ +P F A+ G I + G I++ Sbjct: 1 MKRIGIICLIPMVLVILISILLYIPPF--QNFAVRLATEYASETTGMNIRI-GQIRLSF- 56 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 ++ +D+++ D +E + LPLL E+ V + + N + Sbjct: 57 -PLNLTIRDVKVITPPD--TLLSLESFQVNIRPLPLLKKEVLVDAIDLRGVKANTGNLIE 113 Query: 120 GVSN-------WFQRKSTMDMIHNVILEKIHVKGGRIKII-----------DQESDQVYF 161 G+ + + L KI + I ++ + Sbjct: 114 GMEIKGTLGKLYAKADRIDLGKEIARLNKIDLSDTAITLLMNDTTTNKDTTSTAVNWKLM 173 Query: 162 LSDLNL-------QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214 L ++L QI L + + + + ++ G+ + + ++ + Sbjct: 174 LDQIDLDRVAFAMQIPGDSLRLSTYIEKAGLTDGIVDLGSARYSASQFLLSGSSLNYDGS 233 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274 + + P P I L ++ +Y G A N S L+G Sbjct: 234 YSDPV-----PGFDPAHIALN-DVNIRIDSLLYGGRDISARIKKFSANDRSGLTLSSLTG 287 Query: 275 NFKISDGNVRISRYKLQSILPNSSTDED---NKTKVSQDEENLLNFSENGAESMHDLNET 331 + +++ L++ N + + + + + Sbjct: 288 DISSDSTTIQVPGLLLKTPYSEIRLLATVPWNTFDNTPSGTLHSLLTASVGKEDVFIFAG 347 Query: 332 DFFEEEEKKNKNDDLKKDD 350 +E ++ ++ Sbjct: 348 PLPKEFKQAYPQKEISLTA 366 >gi|254786620|ref|YP_003074049.1| AsmA family protein [Teredinibacter turnerae T7901] gi|237686155|gb|ACR13419.1| AsmA family protein [Teredinibacter turnerae T7901] Length = 731 Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 34/346 (9%), Positives = 96/346 (27%), Gaps = 52/346 (15%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI---DQKEDGSFESKIE 84 + + E+ G + G + + P V +I++ + D + I+ Sbjct: 34 NANFLKPKLEKALAEQ-GVFTEILGDLNWSVYPVAGVKSGEIQLFPSAARVDTEKLASID 92 Query: 85 GLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----------------- 126 +++ + L L+ E+R+ +++ P ++ ++ G SNW Sbjct: 93 SFNLQLDLLALIRERELRINAVFVQHPKVDLHIGKNGESNWQPVLDAFARDSDTDTDTEG 152 Query: 127 --------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 ++ + +E+I + + + ++ L ++Q+ A Sbjct: 153 GEPAKRAPAEPEKASDNSNASDTQIAIERIKISDFELSYTNAVNNSNIKLRQTDVQLDAV 212 Query: 173 FLNIIS------PLSIDSIKGSVIAEGTGNFDNK---RSAFKIT--ANFPAKNKAISLKI 221 LN + + F T + + + Sbjct: 213 NLNGQPMQIALNSELTFAPYPPIRIGFESTITQTGAGAITFASTRLSAMATEEADARING 272 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281 + + P + + +E P + ++ + K + N + Sbjct: 273 NISVVTSPA-LKAEATIQLDELNPAAWLKW--MEVALPEMSNSSALTKFAANANIQYRGD 329 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + ++ D + + L + + D Sbjct: 330 QLEVAVLSATLDKT--KLDAKGTVSLQPELPPKLQLTLAVDQLNLD 373 >gi|121611733|ref|YP_999540.1| hypothetical protein Veis_4831 [Verminephrobacter eiseniae EF01-2] gi|121556373|gb|ABM60522.1| conserved hypothetical protein [Verminephrobacter eiseniae EF01-2] Length = 1420 Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 37/300 (12%), Positives = 80/300 (26%), Gaps = 34/300 (11%) Query: 4 RVLIGLGFLF-------------SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAV 50 R+L + L ++ G + DFR E A +G + + Sbjct: 11 RLLKTVAGLARWSLRLLLAFWLLLAIIWGVLHGAIVPRIGDFRPQLEAYAARTLGVAVRI 70 Query: 51 KGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110 S+ D+ + ++ + + LL + ++ID+P Sbjct: 71 GAVAAATEGLVLSIGLSDVTLLDAAG-RPALRLPRVVLALSARSLLDAGVE--QLFIDRP 127 Query: 111 HLNFYLSSKGVSNWFQRKSTMDMI-------HNVILEKIHVKGGRIKIIDQE-SDQVYFL 162 L +S G + D ++ ++GG ++ D++ V L Sbjct: 128 ELEIRRTSDGRIQVAGLEFAHDGSGRSAAADWLFAQREVFIQGGTVRWSDEQRQAPVLAL 187 Query: 163 SDLNLQISARFLNIISPLSIDSIKGS-VIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221 S ++L + + L G + + + + Sbjct: 188 SQVDLVLRNGNWQHLMRLDATPPPAWGDRFTLVGRLRASLLHARDSNWRFWNGQLFADFA 247 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIY-------SGVFSVAGDFSKLLNL--ELSAKKSRL 272 ++ DL N+ + G L ++ L L Sbjct: 248 RVDVSQLRHHADLGANVEVARGRGALRAWADVRDGQIVGGTADLALADVATTLGPGLPAL 307 >gi|77457639|ref|YP_347144.1| hypothetical protein Pfl01_1412 [Pseudomonas fluorescens Pf0-1] gi|77381642|gb|ABA73155.1| putative membrane protein [Pseudomonas fluorescens Pf0-1] Length = 358 Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 36/362 (9%), Positives = 100/362 (27%), Gaps = 21/362 (5%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R L + +++ +P + + + + + + + + + Sbjct: 6 RWPLWTIATAVVLLIALHIALPYLV-----HDYLNDKLANMGDYRGQIT-DVDLALWRG- 58 Query: 63 SVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + ++I + + + + + L V + +P +NF Sbjct: 59 AYKINGLKIVKADGKVPVPFVDAPVIDLSVSWHSLWYDHAVVAQVKFFKPQVNFVDGGAN 118 Query: 121 VSNWFQRKSTM-----DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 N + T + + L+++ + GRI + S ++ N+ S L Sbjct: 119 KQNSQTGQGTDWREQLGKLLPITLDEVQISDGRISFRNFNSKPPVNMNATNVDASIYNLT 178 Query: 176 IISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 + EG T + + + +++ + + D Sbjct: 179 NVVDKEGKRDA---RFEGKALLLGHAPLETTATFDPLSNFEDFEFRLRARDIELKRMNDF 235 Query: 235 F---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 G +N + + K L + + + + N I R + Sbjct: 236 ASAYGKFDFNAGRGDVVIEAAANKGQLKGYIKPLLRDVDVFNWHQDVENKNKGIFRSIWE 295 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 +++ + T N+ K L+ S + + + N ++ Sbjct: 296 ALVGGTETVLKNQGKNQFATRVELSGSVHQQDINAFEAFLQILRNGFIQAFNARYERPKP 355 Query: 352 QY 353 Sbjct: 356 DA 357 >gi|53711587|ref|YP_097579.1| outer membrane assembly protein [Bacteroides fragilis YCH46] gi|52214452|dbj|BAD47045.1| outer membrane assembly protein [Bacteroides fragilis YCH46] Length = 988 Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 35/287 (12%), Positives = 88/287 (30%), Gaps = 30/287 (10%) Query: 3 RRVLIGLGFLFSVVL-----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++ L G VL AF + + A + + ++ +++ Sbjct: 6 KKTLKISGITLGTVLLVLLVAIAFVINFIVTPKKLTPVVLDAANQTLNAHLDME-SVELT 64 Query: 58 I---LPFPSVFFKDIRIDQKE-------DGSFESKIEGLSMRAEFLPLLS-GEIRVFDMY 106 P + K+ + K + + + L+ I V ++ Sbjct: 65 FFSTFPQFGLKVKNGSLVSKALNDSSWCKTDSLLSFKECVLTVNPIAYLTENRIVVHNLS 124 Query: 107 IDQPHLNFYLSSKGVSNWFQRKSTMDMIH----------NVILEKIHVKGGRIKIIDQES 156 +++ + Y + G +NW +++ D I + + I +K + D+ + Sbjct: 125 LEEVAVYAYRNKAGKANWEVTRASADTIPADTASTDFNSEIDIRNIELKHANLVFDDRNT 184 Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216 D + D NL++ IS L + +++ G + A + + + Sbjct: 185 DIYSRIDDANLKLRLSLTKGISTLGLKFDNKNILFWQQGELLVNKIATSLRTDIMVDRQT 244 Query: 217 ISLKI-QLFPLAYPIIIDLFGNLFWNEKQPIY--SGVFSVAGDFSKL 260 K+ I +D+ G + + + + Sbjct: 245 AVWKLKDTELDVNGIRLDVNGAFRRDTVAKTIGMDLEYGLHAPSMET 291 >gi|259418692|ref|ZP_05742609.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B] gi|259344914|gb|EEW56768.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B] Length = 1173 Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 91/309 (29%), Gaps = 32/309 (10%) Query: 29 WTDFREDFERQATLIVGKKIAVK-GGIK--IHILPFPSVFFKDIRIDQKEDGSFESKIEG 85 R + ER+ +G + ++ G I+ +H P + +D+ + + +E Sbjct: 97 PQWLRAEAERRIERHLGG-LQIEFGEIELVVHSGWRPRLSLRDVTLFYPDGS-PAVHLED 154 Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG-------------VSNWFQRKSTMD 132 PLL G++R + + G + Sbjct: 155 AQAALAMRPLLRGQLRPKLISLSGLFATLETGRDGAVALSFSDGATPLRQARNLPQLIDT 214 Query: 133 MIHNVIL------EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186 + L ++ + + ID+ D+ + L + +S ++ + Sbjct: 215 WDRQLELPILSAVTRVETQSVTLNYIDRRIDRAWTLDGGAVLLSREGDSVNIDAGFSVLS 274 Query: 187 G-----SVIAEGTGNFDNKRSAFKITANF-PAKNKAISLKI--QLFPLAYPIIIDLFGNL 238 G +V A + + + F + + P+ + A L L PI L G + Sbjct: 275 GREYASTVDANYRSDIGDTAAEFAVVVDQVPSVDIASQSPAFGWLDVLRAPISGALRGAV 334 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 + K + + + + F ++ +L S Sbjct: 335 DSDGKLLPLTASLEIGTGVIQPNDQLKPVPLQSAQSFFTFDPARQELAFTRLSVESGWVS 394 Query: 299 TDEDNKTKV 307 + + ++ Sbjct: 395 GQMEGRAEL 403 >gi|256841548|ref|ZP_05547055.1| outer membrane assembly protein [Parabacteroides sp. D13] gi|256737391|gb|EEU50718.1| outer membrane assembly protein [Parabacteroides sp. D13] Length = 1099 Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 40/335 (11%), Positives = 97/335 (28%), Gaps = 42/335 (12%) Query: 10 GFLFSVVLVGAFTVPL-FIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL---PFPSVF 65 G F + L+G + + + + + + +++ P+ V Sbjct: 19 GIFFILPLIGGGILKWAVLPPEKLTPLVVEKTNEFIEAHLECE-RVELTYFETYPYLGVK 77 Query: 66 FKDIRIDQK-------------EDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPH 111 + R+ + + L SG++ + + +D Sbjct: 78 LTNGRLISHLAEDSIGYQEDLMIPSDSLLSFKKAIVVFNPTDYLFSGKVTIPRVIMDSIR 137 Query: 112 LNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 Y++ +G +NW +S MD + + L+++H+ G D++ D + Sbjct: 138 FYGYVNEEGKANWEIYQSEMDSVDESSSSPLPKIDLQQVHITNGHFVYDDRQQDLYTAID 197 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL---K 220 L I + L +++ S++ + A + + + Sbjct: 198 GFFLHIDGLLTQRGNKLDVETGSSSIVFRSPSYSLANKLALRFKGRLLLADGLRRIGLRD 257 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL------------NLELSAK 268 +L P D F + F + L + L+ Sbjct: 258 AELLVNNLPFTADGFMVPATEDNPSRIDMTFGLKVSDMNDLLHFIPDEYFKDRDKTLAEG 317 Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 + L G+ + G+ + L + + S Sbjct: 318 RIILEGDIRGELGDSIVPTVNLCCKIEDGSYHVKG 352 >gi|225872277|ref|YP_002753732.1| hypothetical protein ACP_0604 [Acidobacterium capsulatum ATCC 51196] gi|225793859|gb|ACO33949.1| conserved domain protein [Acidobacterium capsulatum ATCC 51196] Length = 1388 Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 27/288 (9%), Positives = 73/288 (25%), Gaps = 12/288 (4%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDF----REDFERQATLIVGKKIAVKGGIKIHILPFPS 63 + ++L+ V + F R Q G ++ + G + Sbjct: 30 IGAGVVLLLLIAVSAVLWYATTPQFEQRVRTVVISQLERTTGGRVEL-GAFHWQLA-KMG 87 Query: 64 VFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 +++ I + ++ L + + + LL +I + + +P + + G Sbjct: 88 FVAENLTIHGKEGPGQLPFLHVDELVVHLKVIDLLGAKIGLSYLGAQRPVFHLIVYPDGS 147 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 +N K + + E + + ++ D +L +++ Sbjct: 148 TNAPSPKVKQKSKTSAVDEVFSLAIDQTQLNDGLLLINEKKIPFSLDARHVGADVLFDRR 207 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII-IDLFGNL-- 238 G + A + ++I+ + + G + Sbjct: 208 RHDYAGKIKASDIVLQRGTANPVHSKLMLEVNAWRKHIQIKNLVFTSGDSHLQITGTVTN 267 Query: 239 -FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 G + + RL N + Sbjct: 268 YAHPHLAVTADGQIDLRVLEPLTGTRGIRKGVLRLKAQGNGDAQNFAL 315 >gi|296104959|ref|YP_003615105.1| hypothetical protein ECL_04628 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059418|gb|ADF64156.1| hypothetical protein ECL_04628 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 1266 Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 40/319 (12%), Positives = 93/319 (29%), Gaps = 26/319 (8%) Query: 2 LRRV---LIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56 +RR+ L+ G V++ + + +R + G + V + Sbjct: 1 MRRLPGILLLTGATLVVIVALLVSGLRLVLPHLDSWRPQVLAKIESATGVPVDVSQ-VSA 59 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ +DI K+ G KI+ +++ + LL + D+ Q Sbjct: 60 SWQNFGPTLDARDISASLKDGG--YLKIKRVTLALDVWQSLLHMRWQFRDLTFYQLQFLT 117 Query: 115 YLSSKGVSNWFQRKSTMDMIHNVI-LEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 G N ++ + + ++ + I + L+ LN + Sbjct: 118 NTPLSGGDNTQSLEANRLSDLFLRQFDHFDLRDSEVSFITLSGQRAELKIPQLTWLNGKE 177 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGN-FDNKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++ S++ G + D + K+ + L +Q Sbjct: 178 RHRAEGQVNLSSLNGQHGVMQVRMDLRDDDGLLNNGKVWLQADDVDVKPWLGDWLQQNMQ 237 Query: 227 AYPIIIDLFGNLFWNEK-QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + + G + + + L+ + G + Sbjct: 238 LETARFSLEGWMTLTKGVFASGDIWLKQGGASWQGESKQHQLSVDNLTAHVTKEKGGWQF 297 Query: 286 SRYKLQSILPNSSTDEDNK 304 + +P++ D K Sbjct: 298 A-------IPDTRITMDGK 309 >gi|126668767|ref|ZP_01739715.1| predicted membrane protein [Marinobacter sp. ELB17] gi|126626750|gb|EAZ97399.1| predicted membrane protein [Marinobacter sp. ELB17] Length = 1244 Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 26/260 (10%), Positives = 67/260 (25%), Gaps = 19/260 (7%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGL 86 D +R+ + Q + +G +++ + P KD+ + + + + L Sbjct: 50 DMNQYRDTLQAQLSEQLGYTVSIA-ELSARWYWLNPEFSAKDVMVTETGPDEPLAYLRHL 108 Query: 87 SMRAE-FLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH---------- 135 MR + +L + + D L + G + Sbjct: 109 RMRVDFLASVLRLRLVLEKFEADGLDLALRQKAAGQVVLAGSGLEVSDNSLQRLVALAER 168 Query: 136 NVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 + + + ++ + D + + + L+L + + Sbjct: 169 WLSKPFVRITRIQLAVTDSSGNLRQLDIPQLDLLYQRGLFRASGRAMQAGTNQQL---AS 225 Query: 195 GNFDNKRSAF-KITANFPAKNKAISLKIQLFPLAYPIIIDLFG-NLFWNEKQPIYSGVFS 252 +R + T + L L + + G ++ G Sbjct: 226 FRLVGRRFLLGQFTGQLYVDVASGRLFDGLIDDYRWRDMRVEGFDVGGQAWLSFRDGQLE 285 Query: 253 VAGDFSKLLNLELSAKKSRL 272 + L+L L Sbjct: 286 QVNGTLRTPYLQLGVGAMSL 305 >gi|121606785|ref|YP_984114.1| hypothetical protein Pnap_3897 [Polaromonas naphthalenivorans CJ2] gi|120595754|gb|ABM39193.1| conserved hypothetical protein [Polaromonas naphthalenivorans CJ2] Length = 1379 Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 39/395 (9%), Positives = 102/395 (25%), Gaps = 29/395 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59 LR +L + + + + + +I +FR E QA+ +G + + Sbjct: 26 LRGLLWLVASAWLLFGLSWLVLHGWIVPRIAEFRPRLEAQASRALGVPVRIGQITGRSEG 85 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 PS D+ + + ++ + L + + ID+P ++ ++ Sbjct: 86 AIPSFELHDVSLLDAQG-REAVRLPHILGALSPSSLW--GLGFEQLVIDRPEVDIRRAAD 142 Query: 120 GVSNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQIS 170 G + + V+GG ++ D+ LS ++ + Sbjct: 143 GKIFVGGLEVSKDSDTGHSAMADWLFSQTEFIVRGGTVRWTDEMRQAPPLALSQVDGVMR 202 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDN---KRSAFKITANFPAKNKAISLKIQLFPLA 227 + L + + + T +F A + ++ Sbjct: 203 NGHRRHLMRLDAT---PPPEWGERFSLRGIFRQPLLSRRTGDFAAWTGQVYGDFSHVDVS 259 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 +L + + K+ + + + Sbjct: 260 RIQRHASLESLGLALNGGQGALRAWLDVGKGKVTGALVDVALRDVDARLGSRLEPLAFES 319 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347 + VS + +G + + ++ LK Sbjct: 320 LAGRMGAS----QHAGGFDVSTEGL-QFRLQ-DGLQWPGGNLALAHTRASRRGPEHTTLK 373 Query: 348 KDDIQYSVNKKEEKDNSHDKENQ---ENFSGDKMI 379 D + + + D Q +F+ ++ Sbjct: 374 ADRLDLAALARIASRLPLDNTAQALVASFAPQGLV 408 >gi|146313316|ref|YP_001178390.1| hypothetical protein Ent638_3682 [Enterobacter sp. 638] gi|145320192|gb|ABP62339.1| putative protease [Enterobacter sp. 638] Length = 1265 Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 40/319 (12%), Positives = 92/319 (28%), Gaps = 25/319 (7%) Query: 2 LRRV---LIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56 +RR+ L+ G V++ + + +R + G + V + Sbjct: 1 MRRLPGILLLTGATLVVIVALLVSGLRLVLPHLDSWRPQVLAKIERATGVPVDVS-QLSA 59 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 + P++ +DI + G KI+ +++ + LL + D+ Q Sbjct: 60 NWQNFGPTLDARDINAALPDGG--YLKIKRVTLALDVWQSLLHMRWQFRDLTFYQLQFLT 117 Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQIS 170 + + + + + + ++ I I + L+ LN + Sbjct: 118 NTPLRNSDSKGIETNRISDLFLRQFDHFDLRDSEISFITLSGQRAELAIPQLTWLNGKDR 177 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGN-FDNKRSAFKITANFPAKNKAISLK--IQLFPLA 227 R ++ S+ G + + ++ ++ + L +Q Sbjct: 178 HRAEGQVNLSSLTGQHGIMQVRMDLRDDNGLLNSGRVWLQADDVDVKPWLGKWMQDNVAL 237 Query: 228 YPIIIDLFGNLFWNEK-QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 L G L + G K N L+ + N + S Sbjct: 238 QRARFSLEGWLTLTDGDIAAGDVWLKQGGAAWKGDNQSHDMSVDNLTAHVTRQGANWQFS 297 Query: 287 RYKLQSILPNSSTDEDNKT 305 +P++ D K Sbjct: 298 -------IPDTRITMDGKA 309 >gi|77463530|ref|YP_353034.1| hypothetical protein RSP_2972 [Rhodobacter sphaeroides 2.4.1] gi|77387948|gb|ABA79133.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1] Length = 1094 Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 28/322 (8%), Positives = 76/322 (23%), Gaps = 31/322 (9%) Query: 16 VLVGAFTVPLFIDWTDFREDFERQATLIVG--KKIAVKG-GIKIHILPFPSVFFKDIRID 72 AFT + E + + +++ G + + P + D+R+ Sbjct: 38 FATLAFTGRPLPLPGWAVTEAETRINRALEPALSVSLGGLVLTVEPNWIPRLRLDDVRLR 97 Query: 73 QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST-- 130 Q + + + + L G + + + + + G ++ + Sbjct: 98 QADG-RTLVTLPEARVVFDRGAALRGALHPKTITLSGARIALRRLADGRFDFAMGEQGGT 156 Query: 131 ----------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 L +I +G + + D+ + + + D L + Sbjct: 157 FRLASYAELRETVDRLFAQPVLADLRRIEAEGTTLTLDDRRAGRTWQAGDGRLTLVNGPD 216 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK---------IQLFP 225 + + + A + A A ++ L Sbjct: 217 RRALEIGLTLLNSKGRAPAQALVTFVTTPGSPEARISATVDHVAAADIAAQAAPVAWLEV 276 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L + L + + + F G R+ Sbjct: 277 LDAALSGRFSAALDGEGRLTRLEAGLDSGEGALQPRPETRPIAFDKAGLAFAYDPGRERL 336 Query: 286 SRYKLQSILPNSSTDEDNKTKV 307 + +L+ + + Sbjct: 337 NLTRLEVQGRSIRLSAQGHAYL 358 >gi|262197794|ref|YP_003269003.1| glycosyl transferase family 51 [Haliangium ochraceum DSM 14365] gi|262081141|gb|ACY17110.1| glycosyl transferase family 51 [Haliangium ochraceum DSM 14365] Length = 749 Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 96/309 (31%), Gaps = 35/309 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFID----WTDFREDFERQATLIVGKKIAVKGGIKIHI 58 RR+L + +V + A LF W + + +G+++AV +++ Sbjct: 9 RRLLRVCAIVLGLVGLLALAAWLFFPQIGAW-AVKSRGLPRLEAALGRELAVA-EVEVT- 65 Query: 59 LPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 V + I + D ++I +++ + G R+ ID + Sbjct: 66 --RSRVVLRGITVRGPADAEDRPLAQIARVAVDFDLWQAARGRPRLGAALIDGLGAHVVR 123 Query: 117 SSKGVSN--------------WFQRKSTMDMIHNVILE--KIHVKGGRIKIIDQESDQVY 160 + G N + +D V L + + G + + D+ Sbjct: 124 HADGSDNVRDLLRRLREQGAAPQAGEGGVDTGAGVSLRPSSVTLTRGTLTVEDRGHGVEL 183 Query: 161 FLSDLN--LQISARFLNIISPLSIDSIKGSVIAEG-TGNFDNKRSAFKITANFPAKNKAI 217 + ++ L + + ++IDS + + +G + + T + P +N + Sbjct: 184 TVGGVSAELDAAGALSAELDDIAIDSGAAAGVGDGPRLSAQVAHAVLTTTLDRPVENALV 243 Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 ++ + L + + +AG S + G+ Sbjct: 244 RIEDATATATARHSVTLSAVSGTLSPEGGSALALDLAGS-----YGGSSEPLWQARGSID 298 Query: 278 ISDGNVRIS 286 ++ I Sbjct: 299 LATRQASID 307 >gi|26987674|ref|NP_743099.1| hypothetical protein PP_0938 [Pseudomonas putida KT2440] gi|24982359|gb|AAN66563.1|AE016285_1 conserved hypothetical protein [Pseudomonas putida KT2440] Length = 1273 Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 40/295 (13%), Positives = 102/295 (34%), Gaps = 19/295 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60 R +G+ L +V++ ++ + ++R D E +A +G + V G ++ H Sbjct: 15 RWGLGICALLAVLVALYVSLGRELVPLVAEYRADVESKAEQALGLPVHV-GALEGHWSGL 73 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSK 119 P + +D+++ + G+ +++ + + + L+ E+R+ + + L + + Sbjct: 74 APVLRVRDLQLGE---GTKALRLDDVMVVPDIWASLTAREVRLARIQLGGLQLILRENEQ 130 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 G N D + ++ GRI + D + D + + Sbjct: 131 GAWNLEGLPKKDDAPLDPADLLQRLRQLGRIDVFDSLVTLHPWQRD-----PLTLTYVSA 185 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKIT---ANFPAKNKAISLKIQLFPLAYPIIIDLF 235 L + + ++ T D + A + + ++ + + L + + Sbjct: 186 GLQAGAKRQALDLRATLP-DGQPLALSLNSRMSAEAWRDGEVEAYVSLPQSDWAHWLPPR 244 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 W+ G F + +L + RL G + ++ L Sbjct: 245 VLGQWHADTLRAGGEFWIGWGKGQLQRAVVRLNAPRLEGAY-AGRKAANLNNLAL 298 >gi|282879119|ref|ZP_06287878.1| AsmA family protein [Prevotella buccalis ATCC 35310] gi|281298761|gb|EFA91171.1| AsmA family protein [Prevotella buccalis ATCC 35310] Length = 1545 Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 51/384 (13%), Positives = 121/384 (31%), Gaps = 49/384 (12%) Query: 1 MLRRVLIGLGFLFSVVLVGAF------TVPLFIDWTDFREDFERQATLIVGKKIAVKGGI 54 M+++ L+ G + V + + +P W + + A+ G +I++ Sbjct: 1 MMKKALLWGGAILGVPVALSALLAILLYIPPVQQWMLQKATY--YASQKTGMEISIG--- 55 Query: 55 KIHILPFPSVFFKDIRIDQKEDGSF-----ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 ++ + + +D+ I Q D + + + +PLLS ++ V ++ + Sbjct: 56 RVRLAFPLDLSMEDVLIIQPNDSLPQVKDTVASARRMVADVQLMPLLSKKVEVDELTFEG 115 Query: 110 PH---LNFYLSSK-----GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI--------ID 153 +N ++K G N V + + +++ ++++ Sbjct: 116 LKLNTVNLIAAAKVQGTIGKLNLVSH-GIDLSGSTVRVNEANLEDAKLQVALADSVPKDT 174 Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITAN 209 ES + + L I + + P ++ +V ++G+ + K Sbjct: 175 TESKTTWKIGLDQLDIRRSDITVHLPGDTLQVRAYLGKAVASDGSFDLGEGVYQLK---- 230 Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL----EL 265 L A+ +D + I S + + + + + Sbjct: 231 -KLDWTDGKLNYDNKWKAHTNGLDYNHLALSDITVGIDSLQYQASKLDMNVRQIAFREKS 289 Query: 266 SAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED---NKTKVSQDEENLLNFSENGA 322 LSGN + + + L++ N D D N + N Sbjct: 290 GLDLQHLSGNVALDSTRLSLKNAHLKTSESNLMADLDMDLNSFSEQTSGKMNANVHATLG 349 Query: 323 ESMHDLNETDFFEEEEKKNKNDDL 346 + D +E ++K N L Sbjct: 350 KQDLMRFMGDLPKEFKQKWPNAPL 373 >gi|126462386|ref|YP_001043500.1| hypothetical protein Rsph17029_1618 [Rhodobacter sphaeroides ATCC 17029] gi|126104050|gb|ABN76728.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17029] Length = 1094 Score = 65.3 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 29/322 (9%), Positives = 76/322 (23%), Gaps = 31/322 (9%) Query: 16 VLVGAFTVPLFIDWTDFREDFERQATLIVG--KKIAVKG-GIKIHILPFPSVFFKDIRID 72 AFT + E + + +++ G + + P + D+R+ Sbjct: 38 FATLAFTGRPLPLPGWAVTEAETRINRALEPALSVSLGGLVLTVEPNWIPRLRLDDVRLR 97 Query: 73 QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST-- 130 Q + + + + L G + + + + + G ++ + Sbjct: 98 QADG-RTLVTLPEARVVFDRGAALRGALHPKTITLSGARIALRRLADGRFDFAMGEQGGT 156 Query: 131 ----------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 L +I +G + + D+ + + + D L + Sbjct: 157 FRLASYAELRETVDRLFAQPVLADLRRIEAEGTTLTLDDRRAGRTWQAGDGRLTLVNGPN 216 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK---------IQLFP 225 + + + A + A A ++ L Sbjct: 217 RRALEIGLTLLNSKGRAPAQALVTFVTTPGSPEARISATVDHVAAADIAAQAAPVAWLEV 276 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L + L + + R F G R+ Sbjct: 277 LDAALSGRFSAALDGEGRLTRLEAGLDSGEGALQPRPETRPIAFDRAGLAFAYDPGRERL 336 Query: 286 SRYKLQSILPNSSTDEDNKTKV 307 + +L+ + + Sbjct: 337 NLTRLEVQGRSIRLSAQGHAYL 358 >gi|119503417|ref|ZP_01625500.1| AsmA [marine gamma proteobacterium HTCC2080] gi|119460479|gb|EAW41571.1| AsmA [marine gamma proteobacterium HTCC2080] Length = 1186 Score = 65.3 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 44/363 (12%), Positives = 105/363 (28%), Gaps = 15/363 (4%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R + ++ + D FR+ + + ++ + + + Sbjct: 1 MRSINKFFIATALLISALVVVTLITKDSDFFRDFVALKTSQLLQRNVTFSDLDIDIDIDR 60 Query: 62 PSV-FFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 ++ I Q E G + + A L + ++ + QP L+ Sbjct: 61 SINITVANVVIAQPEGFKGPAFLSLASAELNASIPDLFLSQPKIKSLRFTQPKLHLIQGV 120 Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 +G SNW + + L G ++ + L+ ++ Q R L + Sbjct: 121 EGHSNWQFKLNKTQATA---LTSGKPAKGIPVFLESANIDDLQLTLIDNQEETRTLRVDV 177 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 L D + G N ++ ++ A + + L + ++ + Sbjct: 178 TLDQDLSGAKLSVVGDVNKAPLQADVTASS-ADAFTSLTDINVGLDMHLGDVHLEGKALV 236 Query: 239 FWNEKQPIYSGVFSVAGDFS---KLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 ++ G L + L + + G + +L ++ Sbjct: 237 RDLRSPNTPQVEIALQGPSVEYFTELLNLPPFSQGALDLSISVQPG-IEKIVVRLDGLVG 295 Query: 296 NSSTDEDNKT-KVSQDEENLLNFSENGAES--MHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 + S + L + +G + + DL F +K+D + Sbjct: 296 DFSGVISGTVNNFRTLTDVELAVAVSGPDIGRLADLLGAPKFPHVPFSATG-KVKRDQQR 354 Query: 353 YSV 355 SV Sbjct: 355 LSV 357 >gi|119947093|ref|YP_944773.1| hypothetical protein Ping_3491 [Psychromonas ingrahamii 37] gi|119865697|gb|ABM05174.1| hypothetical protein Ping_3491 [Psychromonas ingrahamii 37] Length = 432 Score = 65.3 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 34/370 (9%), Positives = 101/370 (27%), Gaps = 38/370 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R + F+ ++ F D R +Q + G ++ + + H+ Sbjct: 1 MKRCFVTGAFILGLLGFLLLLFIRFFDINAHRGFISKQIEQLSGYQVNFE-SVDSHLFSD 59 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ------------ 109 SV + + ++ + + L L ++++ ++ + Sbjct: 60 YSVSLSGLSLTIAN--RQVFYVDKVKVNLTKLNLWQRQLKLGEVQLTGVRISGDTAAFIN 117 Query: 110 -PHLNFYLSSKGVSNWFQRKSTMDMIHN-VILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 + +S V + + + + + + V +I+ V Sbjct: 118 TADVKIVENSNSVQQTAEVQIQKKLAWQRLTISRFSVNDLKIEFTHAGQRVVLD------ 171 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 A F + + D + G + + TA+ K + L Sbjct: 172 --GADFTSDNLQIIADHKLVKMPFSGNLKLLAREFTAQPTASKTLTVKNLQLTASFNLKN 229 Query: 228 YPIIIDLF-GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-LSGNFKISDGNVRI 285 + G+L + + ++ S+ SG ++ + + Sbjct: 230 LQANLSFKAGSLNLAFGPEEVALQNTELVAELNNNKASITKLTSQIFSGQLQLQAEALFL 289 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 + +S + V + +N ++ ++ + + Sbjct: 290 IK------PLSSPFLSVQQLTVQKLAIKNMNV-----VIPAVFKDSGAVKKNKLLFPITN 338 Query: 346 LKKDDIQYSV 355 L ++ Sbjct: 339 LLLKELIVKN 348 >gi|146277888|ref|YP_001168047.1| hypothetical protein Rsph17025_1851 [Rhodobacter sphaeroides ATCC 17025] gi|145556129|gb|ABP70742.1| hypothetical protein Rsph17025_1851 [Rhodobacter sphaeroides ATCC 17025] Length = 1097 Score = 65.3 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 32/328 (9%), Positives = 80/328 (24%), Gaps = 31/328 (9%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKG-GIKIHILPFPSVFF 66 G+ ++ L G ++ R + + ++V G + + P + Sbjct: 34 GVAGFATLALTGRPLPLPVWAVSEAEARINRALSPAL--SVSVGGIVLTVEPSWIPRLRL 91 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126 D+R+ Q + + + + L G + + + + G + Sbjct: 92 DDVRLLQADG-RVLVSLPEARVAFDRGAALRGALHPKVITLSGARIALRRMRDGRFDLAM 150 Query: 127 RKST------------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 + + L +I +G + + D+ + + + D L Sbjct: 151 GEQGGGLRIASYAEAREAVDRMFALPLLADLARIEAEGTTLTLDDRRAGRTWQAGDGRLA 210 Query: 169 ISARFLNIISPLSID----SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK---- 220 + R L + A T +I+A + Sbjct: 211 LVNRPDRRALELGLSLLDPGGGAPAQAVMTFVTTPGSPEARISATVDQVAASDIAAQAAP 270 Query: 221 -IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 L L + L + + + R F Sbjct: 271 VAWLEVLDTALSGGFSAALDGEGRLTRFEATLDSGEGALQPRPETKPIAFDRAGMAFSYD 330 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKV 307 R++ +L+ + + Sbjct: 331 PARERLNLTRLEVQGRSLRLSAQGHAYL 358 >gi|113970751|ref|YP_734544.1| hypothetical protein Shewmr4_2416 [Shewanella sp. MR-4] gi|113885435|gb|ABI39487.1| protein of unknown function DUF748 [Shewanella sp. MR-4] Length = 1072 Score = 65.3 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 36/351 (10%), Positives = 117/351 (33%), Gaps = 33/351 (9%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP-SVFFK 67 ++ + V + + T ++G+ + ++ + I PF V + Sbjct: 21 FLVYLAITYLSYLIVLGLVLPKAIVSFTPEKLTQVLGRPVTLQ---DMRINPFTYRVNIE 77 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL-SSKG----- 120 + + +K++ + + L F + + + + + + P N ++G Sbjct: 78 QLEVKEKDN-QAFAGLSQLQFEVNFWQSVFNQALVIDHIQLQGPFANVSRFQTQGVTQFN 136 Query: 121 ------VSNWFQRKSTMD------MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 N + S D VIL ++ + G++K D+ + + ++N + Sbjct: 137 FDDIITRLNQPKTPSEPDTTTEKTRPLRVILGELTLTSGKVKFDDKITQALVDYPNINFK 196 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 +S + S S + + + + + A+ Sbjct: 197 LSQLDTEYLMTAKPTSPANSQATQSQNKPTTAAPTAQANTASNPPSILHNQFVVQLQDAH 256 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFS------KLLNLELSAKKSRLSGNFKIS--- 279 + L G + + + ++L+A + ++ ++++ Sbjct: 257 AGEVSLAGQFQLFPFKLVGDVQLAKLQLAPFWPFVADQFKVKLAAGELSINSHYQVDLPT 316 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330 +G+++++ + Q I+ +++ ++ + + + A+ D+ + Sbjct: 317 EGDLQLTADRGQVIVQKVDLLNGDQSAIALPLLAIDGINLDLAKQRIDIKQ 367 >gi|255264469|ref|ZP_05343811.1| conserved hypothetical protein [Thalassiobium sp. R2A62] gi|255106804|gb|EET49478.1| conserved hypothetical protein [Thalassiobium sp. R2A62] Length = 1116 Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 42/368 (11%), Positives = 102/368 (27%), Gaps = 44/368 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVP--LFIDWTDFREDFERQATLIV-GKKIAVKG-GIKIHI 58 R L+ L V++ AF + T + E QA+ + G I + I I Sbjct: 47 RAALLVLAIPLIFVVLAAFLIVGQEITAPTWIKSRIETQASEALAGGAIRMDEITITIAR 106 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLS 117 PSV + + + ++++ + LL G+I + +D L Sbjct: 107 DLHPSVTLRGVSVQDANGQR-LARVQTVRAGVSPRGLLFQGDILPQTVSLDGAELALTRD 165 Query: 118 SKGVSNWFQRKSTM-------------------DMIHNVILEKIHVKGGRIKIIDQESDQ 158 + G D LE++ G + DQ + + Sbjct: 166 ANGAVALAFETGAAPAQTASNLPELLDGLDAMFDAPALAALEEVRATGLILNYADQRARR 225 Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAI 217 + + ++ ++ S+ + G S + ++++R + Sbjct: 226 TWIVDGGRAVLTVDDQSLSLGSSVALLSGRSYVTTLAATYESRRGTSAAELGLNITDAVA 285 Query: 218 S-----------LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS 266 + L + PL+ + + + + Sbjct: 286 ADIASQSPALSFLTLIDAPLSGAMRASIDDAGTL--GPINATLELGQGALRPTAQTAPIG 343 Query: 267 AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS--QDEENLLNF-SENGAE 323 ++ + +D +R + + + + + +D+ N Sbjct: 344 FDALKIYLGYDPADTGLRFDQI--EVASDWGNVIAEGHAYLRELRDDIPQALLGQFNLTN 401 Query: 324 SMHDLNET 331 + N+ Sbjct: 402 ISLNPNDV 409 >gi|330969674|gb|EGH69740.1| hypothetical protein PSYAR_04188 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 1271 Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 97/297 (32%), Gaps = 19/297 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A+ +G +++ G ++ F Sbjct: 13 RWGLSLCALILVLAALYVSLGRQLTPLVAEYRVDVETRASSALGIPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + D+ + + G+ +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVLLANDVMVGE---GASALRLDRVRVVPDLWESLLARDVRIAHLEVDGLQFSLRQDKD 128 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 G + D + + +K ++ D + + A Sbjct: 129 GAWSIQGLPVHNDSPFDP---EQALKQMQMVAHVSLLDSQVTVQPFDA---APLTLTYVN 182 Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235 LS+D+ + + D + A + + K+ + L + + Sbjct: 183 LSLDTGSYAQRLDARLTLPDGQPVALNMRSRIQASQWKDGEADIYASLPQSDWARWLPKS 242 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 W + G ++ + + ++ G + I+ L + Sbjct: 243 LTREWTLAKLQAGGEVWLSWGKGTVQSATTRLNAPQVKGVY-AGHKPSTINNLALNA 298 >gi|262198433|ref|YP_003269642.1| hypothetical protein Hoch_5264 [Haliangium ochraceum DSM 14365] gi|262081780|gb|ACY17749.1| protein of unknown function DUF490 [Haliangium ochraceum DSM 14365] Length = 1515 Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 105/335 (31%), Gaps = 33/335 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTD--FREDFERQATLIVGKKIAVKGGIKIHILPF 61 R+ GL L V + G ID R ++ ++ + G I+ +L Sbjct: 12 RLFAGLVLLIVVAVAGVLAFLH-IDRGRAFVRNQVVSALDDLLAGRLEI-GSIEGSLLD- 68 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + + + E ++++ +++ + L++ E+ + + + ++ Y + G Sbjct: 69 -EFSLRHVVLYDGE-ERVAAEVDLITVDTDLWQLINNEVAIEHVSAEGVRVHAYRNPDGS 126 Query: 122 SNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 N Q T + ++++ V G I + + + D L Sbjct: 127 LNLAQLVAPQPEEPDTGPSPWVIDIDQVTVLDGAFSITEPDGSTSLSVRDFGLDGELLTG 186 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 +++D E +D+ + A F + A++ L ++ Sbjct: 187 GGHVHVAVD--------ELRARWDDVARDALVRATFGIHDGAVTAYGVEARLGEGRVLAP 238 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 W + + ++A + ++ A + L + +RI L Sbjct: 239 LAYFDWQKMRL-----LALAAADVPVALVDDLAPDTGLLSGISLVTAALRIDD-SLPIWF 292 Query: 295 PNSSTDEDNKTKVSQDEENL-----LNFSENGAES 324 S+ + + E L G + Sbjct: 293 ALSADAGGGRVQALGAAEPEIPAASLRLGAEGVDL 327 >gi|186686055|ref|YP_001869251.1| hypothetical protein Npun_F6018 [Nostoc punctiforme PCC 73102] gi|186468507|gb|ACC84308.1| protein of unknown function DUF490 [Nostoc punctiforme PCC 73102] Length = 1977 Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 45/401 (11%), Positives = 104/401 (25%), Gaps = 31/401 (7%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66 I L L + ++ T+ ++ T + + + + + + V F Sbjct: 29 IALSGLLLLGVIIGIWRLWTFVQTELTPLAQQSLTTTLNRPVKLGKVTQFSL---TGVQF 85 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS-NWF 125 I + +E + + L L+ D+ + P + +G + Sbjct: 86 GASAIPATPTDLDRATVESVEVGFNPLQLIFNRHLKLDVTLVNPDIYIQQDEQGRWVSTS 145 Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY-----FLSDLNLQISARFLNIISPL 180 S L+ + + ++ ++ QE + +S + F + Sbjct: 146 IASSGGGGAIKTDLDYLRFRNAKLALMPQERGREAGEAGEGISSASPTSPVTFSQLNGSA 205 Query: 181 SIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNL 238 + + + E G D + + +K Q L +I L NL Sbjct: 206 QLLANNQLIRFEVGGQADSGGNISIEGETRSKVLAGNFQVKAQDLLAADITRLIKLPVNL 265 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL----------SGNFKISDGNVRISRY 288 + N + ++ GN + ++++ Sbjct: 266 QAGRANGDLLIRLTPGQQTLLYGNAAVQGVTLQIPKVPQLLSNSQGNLRFQGTELQLNNV 325 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLN-FSENGAESMHDLN---------ETDFFEEEE 338 T+ +N S A+ + + D Sbjct: 326 TTNYGKIPVVATGIIDTQAGFKLAGRVNAVSLANAQETLKVKLPVPIAGQVQADLQITGS 385 Query: 339 KKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 K IQ + K + ++ K S +I Sbjct: 386 TKEPIISASVATIQTARIDKVDFNSISSKFELVTSSSSSLI 426 >gi|66047385|ref|YP_237226.1| hypothetical protein Psyr_4158 [Pseudomonas syringae pv. syringae B728a] gi|63258092|gb|AAY39188.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae B728a] Length = 1271 Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 98/297 (32%), Gaps = 19/297 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A+ +G +++ G ++ F Sbjct: 13 RWGLSLCALILVLAALYVSLGRQLTPLVAEYRVDVETRASSALGIPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + D+ + + G+ +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVLLAHDVMVGE---GASALRLDRVRVVPDLWESLLARDVRIAHLEVDGLQFSLRQDKD 128 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 G + D + + +K ++ D + + A Sbjct: 129 GAWSVQGLPVHNDSPFDP---EQALKQMQMVAHVSLLDSQVTVQPFDA---APLTLTYVN 182 Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235 LS+D+ + + D + A + + K+ + L + + Sbjct: 183 LSLDTGSYAQRLDARLTLPDGQPVALNVRSRIQASQWKDGEADIYASLPQSDWARWLPKS 242 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 W + G ++ + + ++ G + + I+ L + Sbjct: 243 LTREWTLAKLQAGGEVWLSWGKGTVQSATTRLNAPQVKGVYAGRKPS-TINNLALNA 298 >gi|330981115|gb|EGH79218.1| hypothetical protein PSYAP_21487 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 1233 Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 100/307 (32%), Gaps = 19/307 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A+ +G +++ G ++ F Sbjct: 13 RWGLSLCALILVLAALYVSLGRQLTPLVAEYRVDVETRASSALGIPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + D+ + + G+ +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVLLAHDVMVGE---GASALRLDRVRVVPDLWESLLARDVRIAHLEVDGLQFSLRQDKD 128 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 G + D + + ++ ++ D + + A Sbjct: 129 GAWSVQGLPVHNDSPFDP---EQVLRQMQMVAHLSLLDSQVTVQPFDA---APLTLTYVN 182 Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235 LS+D+ + + D + A + + K+ + L + + Sbjct: 183 LSLDTGSYAQRLDARLTLPDGQPVALNVRSRIQASQWKDGEADVYASLPQSDWAKWLPKS 242 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 W + G ++ + + ++ G + + I L + Sbjct: 243 LTREWTLSKLQAGGEVWLSWGKGTVQSATTRLNAPQVKGVYAGRKPS-TIDNLALNAWFA 301 Query: 296 NSSTDED 302 + T D Sbjct: 302 RTDTGFD 308 >gi|299139205|ref|ZP_07032381.1| protein of unknown function DUF490 [Acidobacterium sp. MP5ACTX8] gi|298598885|gb|EFI55047.1| protein of unknown function DUF490 [Acidobacterium sp. MP5ACTX8] Length = 1414 Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 31/293 (10%), Positives = 83/293 (28%), Gaps = 23/293 (7%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFR----EDFERQATLIVGKKIAVKGGIKI 56 +LR + G L ++++ V + DF+ + + G + + G + Sbjct: 23 ILRVLGWIFGSLALLLVLLVVGVSFYTTTDDFQHRVGGEVVKVLEDSTGAHVEL-GHLSF 81 Query: 57 HILPFPSVFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSG--------EIRVFDMY 106 + ++ + + + + + + +R LS + V + Sbjct: 82 SLW-HLAIEADGLVLHGTEGPGEAPYLSADKIFVRLRINTFLSHIVGKGPQSHVGVNYLR 140 Query: 107 IDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 ++QPH++ + G +N K + + ++ G++++ + + + Sbjct: 141 VEQPHIHLIIDKDGKTNQPVPKHKGTSTEPIQDTLLDLQAGKVELANGLAVLNDRAIPFD 200 Query: 167 LQISARFLNIISPLSIDSIKGSVIA-EGTGNFDNKR-----SAFKITANFPAKNKAISLK 220 L + + S D +V + + SL Sbjct: 201 LAAQDLAVEVHYIASSDHYGATVDLADLRTKMAKQPEVQSKLHLTAEIGRDMAQLQ-SLD 259 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS 273 + + L + Q G + L+ L Sbjct: 260 FRTGATTHLTANALLQHFNKPAWQVQAKGSVELKQLGFLTGVEGLTGGLVDLD 312 >gi|167623599|ref|YP_001673893.1| hypothetical protein Shal_1668 [Shewanella halifaxensis HAW-EB4] gi|167353621|gb|ABZ76234.1| protein of unknown function DUF748 [Shewanella halifaxensis HAW-EB4] Length = 1037 Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 44/393 (11%), Positives = 110/393 (27%), Gaps = 37/393 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61 +R+LI ++ + +I + +Q + ++ + I ++ + I PF Sbjct: 22 QRLLIISAAIYLTFTAILGLLVPYI----LVKQAPQQLSALLQRPITLE---SVKINPFT 74 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL--SS 118 V ++ + ++ + LS +F + + V D+ + P +N S Sbjct: 75 LEVAIDKFQLLETDN-KPFVSFQQLSFEYQFWNSVFNTAFSVADVTLTAPAINVVRVKSP 133 Query: 119 KG-VSNWFQ---------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 +G N+ ++ I + ++ + + + +D ++ Sbjct: 134 QGLRFNFSDIIDSLANRHTEESVSDSTSSAGIPHFMVTNLAIINANLSFVDHVTNSQLHY 193 Query: 163 SDLNLQISARFLNIIS-----PLSIDSIKGSVIAEGTGNFDNK-RSAFKITANFPAKNKA 216 +LN + L + A TG + I + Sbjct: 194 PNLNFNVKFFDSKHAIKSTLENLGDEQKTNHYSAHVTGRNGGVIATQGLIQLSPLNIVGD 253 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF 276 L + + I + S + + K + +L + Sbjct: 254 AQLT-NIQLPQFWSFISKKFAPELTSGRLSLSSNYQLQMQDDKFE-VTTDLGLVQLD-DV 310 Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEE 336 I + + ++ + + + N L + ++ DL Sbjct: 311 NFDYQKQSIIKLPMIALKGIAFNLQQQTVTAETLDTNGLLLNAKINKNGVDLAALFTPLS 370 Query: 337 EEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369 E + Q NK + K + Sbjct: 371 ETATSAQKAEANPTTQTLANKNNNQSQEQSKPS 403 >gi|254482271|ref|ZP_05095512.1| hypothetical protein GPB2148_888 [marine gamma proteobacterium HTCC2148] gi|214037596|gb|EEB78262.1| hypothetical protein GPB2148_888 [marine gamma proteobacterium HTCC2148] Length = 1108 Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 35/289 (12%), Positives = 81/289 (28%), Gaps = 15/289 (5%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIEG 85 D + + E + ++ +++ ++ ++ + + ++R+ + + Sbjct: 38 DNDNAKWALEEVVSRLLQRELEIEKIHELQVGQNVFLLASNVRLANPAWAPKAPFAHSDR 97 Query: 86 LSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM--------DMIHN 136 L + L G I + + + LN S W D Sbjct: 98 LLLEINVPSLWRKGPIVIHRVELTNAELNLLSHSDHAPTWSFWPEEDSLADDPVEDSSFP 157 Query: 137 VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196 +++ + ++ D + D + L + I L+ + V A G Sbjct: 158 IVINDGRLSTAVVRFQDDDQDINIEVESLLIDQEVEGGLIGLQLAATANGYPVSALGRVG 217 Query: 197 FDNKRSAFK-ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255 + I N AK + + L L L + + + Sbjct: 218 PPKALVTGRNIEMNLAAKVEKLELTASGKALDLANAKGLAMEISARAPRSRVLLDM-LGM 276 Query: 256 DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS-ILPNSSTDEDN 303 + +L A GNF +S ++ + L D Sbjct: 277 PEVRDGPFQLQASLKPKDGNFSVSAIG-KLGEFDLSIEGTSRDPLALDG 324 >gi|116326985|ref|YP_796705.1| hypothetical protein LBL_0154 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116119729|gb|ABJ77772.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 683 Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 87/301 (28%), Gaps = 42/301 (13%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE 84 +FI +++ + G + V + +LPFP V +++ ++ + Sbjct: 37 VFIRQDFYKDFILTEIEKKTGLDVKVDSS-DLVLLPFPGVELGTVQV--RKGNLIVGVSD 93 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST-------------- 130 + + + LL ++ + D+YI +N + G + + Sbjct: 94 RIKINISWFGLLGQKVEIRDIYISGGKINLHKHKDGSIDLIEFFQQEKYKLESVHQTQTI 153 Query: 131 ---------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 I + L+ I ++ + D D+ Y + N S F Sbjct: 154 KIFDSSFTAENTLFNPKEIFKIGLKNIQIENFHVHYQDDTHDREYLIYLWNSAFSISFYG 213 Query: 176 IISPLSIDS--IKGSVIAEGTGNFDNKRSA---FKITANFPAKNKAISLK---IQLFPLA 227 L + S G+ + + K + ++S+ + +FP A Sbjct: 214 NALDLILQGKLDGQSFQIYGSADLNEFPVTLENLKFQSTIILDKCSLSIFRDLLVVFPNA 273 Query: 228 YPIIIDLFGNLFWNE-KQPIYSGVFSVAGDFSK-LLNLELSAKKSRLSGNFKISDGNVRI 285 L G + + + + G K + I + + Sbjct: 274 DFSKTILNGTIRIKKAPNEPINFNVTAQGKDFAYQGGNPFGDIKLNMELRLDIPNKKLDF 333 Query: 286 S 286 Sbjct: 334 P 334 >gi|116332349|ref|YP_802067.1| hypothetical protein LBJ_2909 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116126038|gb|ABJ77309.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 683 Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 87/301 (28%), Gaps = 42/301 (13%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE 84 +FI +++ + G + V + +LPFP + +++ ++ + Sbjct: 37 VFIRQDFYKDFILTEIEKKTGLDVKVDSS-DLVLLPFPGIELGTVQV--RKGNLIVGVSD 93 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST-------------- 130 + + + LL ++ + D+YI +N + G + + Sbjct: 94 RIKINISWFGLLGQKVEIRDIYISGGKINLHKHKDGSIDLIEFFQQEKYKLESVHQTQTI 153 Query: 131 ---------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 I + L+ I ++ + D D+ Y + N S F Sbjct: 154 KIFDSSFTAENTLFNPKEIFKIGLKNIQIENFHVHYQDDTHDREYLIYLWNSAFSISFYG 213 Query: 176 IISPLSIDS--IKGSVIAEGTGNFDNKRSA---FKITANFPAKNKAISLK---IQLFPLA 227 L + S G+ + + K + ++S+ + +FP A Sbjct: 214 NALDLILQGKLDGQSFQIYGSADLNEFPVTLENLKFQSTIILDKCSLSIFRDLLVVFPNA 273 Query: 228 YPIIIDLFGNLFWNE-KQPIYSGVFSVAGDFSK-LLNLELSAKKSRLSGNFKISDGNVRI 285 L G + + + + G K + I + + Sbjct: 274 DFSKTILNGTIRIKKAPNEPINFNVTAQGKDFAYQGGNPFGDIKLNMELRLDIPNKKLDF 333 Query: 286 S 286 Sbjct: 334 P 334 >gi|261856322|ref|YP_003263605.1| membrane protein-like protein [Halothiobacillus neapolitanus c2] gi|261836791|gb|ACX96558.1| membrane protein-like protein [Halothiobacillus neapolitanus c2] Length = 1346 Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 103/350 (29%), Gaps = 30/350 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI- 58 ++R +L + + ++ + + + + T++RE+ + + G + G I + Sbjct: 20 LIRFLLASVAVILVLLALAFSVLRVVLPHMTNYREEAQTVLSKAWGAPVQF-GSIDVAFV 78 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLS 117 P + D+R+ I + L + + ID+PHL F Sbjct: 79 NYRPQLVLTDLRLGNNGP-----VISRFGVSLAPWRSLVARHWVAGKIVIDKPHLAFIQQ 133 Query: 118 SKGVSNWFQRKSTMDMIHN--------------VILEKIHVKGGRIKIIDQESDQVYFLS 163 + G T L + + + I + ++ Sbjct: 134 ADGKWTLSGAPQTSPQNDPEKTANSWADWLSRLPDLGDVSINEAVVSWIRPATSDLHESR 193 Query: 164 D-LNLQISARFLNIISPLSID-----SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217 +NL +AR LS + V G+ ++ ++ N Sbjct: 194 QTINLNATARLAAHGWSLSGELFAPGFGNSPVRLRADGHLGDEP-NAEVYLGAHNWNLPA 252 Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 + + ++ G E +G+ V A S S + Sbjct: 253 MQQAIRDFTHGSVRAEIGGCAEHVEGLDCSAGMPLVNQGQLSGELWLRFAGTSLRSVSAD 312 Query: 278 ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 ++++SR + + ++ + T L + +G D Sbjct: 313 FDISSLKVSRMAKIAGIGALASTQSQATLHRIGGRLLWQKTTDGWRLDAD 362 >gi|261253979|ref|ZP_05946552.1| possible exported protein [Vibrio orientalis CIP 102891] gi|260937370|gb|EEX93359.1| possible exported protein [Vibrio orientalis CIP 102891] Length = 1289 Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 41/386 (10%), Positives = 104/386 (26%), Gaps = 43/386 (11%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64 + + + L + + F+ + G + G PS+ Sbjct: 13 LWLTVTVLIVLAIAVTGLRIALPQLNHFQPQIQAWVNQGSGLDFEISGLHGFWRNTHPSI 72 Query: 65 FFKDIRIDQKEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFY----LSSK 119 + ++ E E + + + ++ + V D+ I Q +L+ + Sbjct: 73 SLQGVKAQTPESSGIHFSAETVEVEIDLFQTIMQLQPVVADLNIYQLNLDITSVQWATGD 132 Query: 120 GVSNWFQRKSTMDMIHNVI------LEKIHVKGGRIKIID-QESDQVYFLSDLNLQISAR 172 S + +I + L+ + +I + +++ ++ L Q R Sbjct: 133 DKSELKPQGEQKGVIQQLDQLFLRQLDSFTIADSQIHFLGIDGTERELNIAKLRWQNDGR 192 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 +S+ A N ++ F + + + Q + + Sbjct: 193 HHLADGEISL--------ANSQINSAKVKANFVDYGSLAEVSGEFYVSAQNVLVTPWLSK 244 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 L + Q ++ ++ LEL S +G ++S Sbjct: 245 YLKTETGIEKGQISFNSWLTLEKSQPVSAYLELE------SSELIWQEGGRH--ELSIES 296 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN-ETDFFEEEEKKNKNDDLKKDDI 351 + E + + + D + + + + L + Sbjct: 297 GVLELEPIEQG-----------WQVNAHSLKLRTDDKAWPELDMAFDWQPEQWRLNVSQL 345 Query: 352 QYSVNK---KEEKDNSHDKENQENFS 374 + K ++ E E FS Sbjct: 346 DIATITPLVKLAPNSQATSELIETFS 371 >gi|298488463|ref|ZP_07006494.1| putative exported protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157088|gb|EFH98177.1| putative exported protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 1005 Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 36/331 (10%), Positives = 91/331 (27%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R L V+V + FI +Q ++ ++ P+ Sbjct: 16 MSRGLKRTLGSLLTVIVLYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPY 72 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 73 TLELTLWGLNIGTP--GKEQVAFEKLYANLQIDSLWTRALHLQRIELIKPKTELLFDKQG 130 Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168 N + + +++I + G + D Q LN + Sbjct: 131 KLNLAQLFKLPASEPAKDEPPGKPFPLRIDEIKLADGYVHFQDMRPSQPIEFLYDTLNFE 190 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 + + + G + G + S + P A Sbjct: 191 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 250 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L K S + + + ++ +S + Sbjct: 251 LPLALEDGVLNFSTAYTLNLAKETELKLTNVSASVAPFALNTPDGRPLVRLQRLDVSETS 310 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + Q + ++ + D + Sbjct: 311 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 341 >gi|17227958|ref|NP_484506.1| hypothetical protein all0462 [Nostoc sp. PCC 7120] gi|17129807|dbj|BAB72420.1| all0462 [Nostoc sp. PCC 7120] Length = 1829 Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 37/357 (10%), Positives = 93/357 (26%), Gaps = 19/357 (5%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 + RR + LG + + + D E ++G+ I + ++ Sbjct: 14 LARRASLVLGVMALGGIATGAWWARNYIYNDLAPLVETNLEQLLGRSIKLG---QVEGFT 70 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 S+ F + I + + ++ +L V D+ + +P++ G Sbjct: 71 LSSLRFSSLSIPATPTDPDTVTAQAVDVQFSPWQILVTRTLVLDVTLVKPNVYIQQEQDG 130 Query: 121 VSNWFQRKSTMDMIH-NVILEKIHVKGGRIKIIDQESDQV-------YFLSDLNLQISAR 172 + K+ L+ +++ G I+++ + + + Sbjct: 131 RWVMAEVKTGEGSGAIQTQLQTLNIVDGNIELLSASAPTKPQGSVVLTQVGGVARFSPDN 190 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + G+V G + + ++ A + L +QL + I Sbjct: 191 ERIGYQINGQLTRGGTVQISGETQPKTQLTNVQVVAQSLLASDVSRL-VQLPIVFQSGRI 249 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 D Q S + + L S+ +G + + + Sbjct: 250 DADLAAQIPANQSEISITGTATANQVTAKVQNLPQPFSKANGRLIFQGQTIALENLRTNF 309 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349 + N + D + ++ D Sbjct: 310 GQV--PLFANGTVNTQTG----FNLAAQVKSVSVK-QLLDTLKVNSPIPAAGEVTAD 359 >gi|312959609|ref|ZP_07774126.1| hypothetical protein PFWH6_1511 [Pseudomonas fluorescens WH6] gi|311286326|gb|EFQ64890.1| hypothetical protein PFWH6_1511 [Pseudomonas fluorescens WH6] Length = 358 Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 34/370 (9%), Positives = 98/370 (26%), Gaps = 31/370 (8%) Query: 2 LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++R L + L +++ +P + R + + + + + + Sbjct: 1 MKRRYSWPLWTVAGLVVLLVALNIALPYLV-----RNYLNEKLADMGDYRGEIA-DVDLA 54 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + + ++I + + + + L V + +P +NF Sbjct: 55 LWRG-AYRINGLKIVKVDGKVPVPFVNAPLIEFAVSWHSLWYDHAVVAEGQFVRPEVNFV 113 Query: 116 LSSKGVSNWFQRKSTMDMIHN--------VILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 G +N ++ + L +I ++ G+I + S ++ ++ Sbjct: 114 ---DGGANKQASQTGKGTDWQEQLSKLLPITLNEIRIEDGKIAFHNFTSKPAVNINATSV 170 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNK-RSAFKITANFPAKNKAISLKIQLFPL 226 S L + + +G + T + + + + + L Sbjct: 171 NASFYNLTNVVDVKGKRDA---RFDGKALLQGQAPLEASATFDPLSDFEEFEFRFRARDL 227 Query: 227 AYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 + D G + + L + + + Sbjct: 228 QLKRMNDFASAYGKFDFKAGTGDVVIEAQAEKGQLRGYIKPLLRDVEVFDWQQDVENKDK 287 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343 I R ++++ T N+ K L+ S + + + N Sbjct: 288 NIFRSIWEAVVGAGETVLKNQGKNQFATRVELSGSVHQQDVSAFSAFLAILRNGFIQAFN 347 Query: 344 DDLKKDDIQY 353 ++ Sbjct: 348 ARYEQPKPSA 357 >gi|107099939|ref|ZP_01363857.1| hypothetical protein PaerPA_01000960 [Pseudomonas aeruginosa PACS2] Length = 1276 Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 33/253 (13%), Positives = 80/253 (31%), Gaps = 16/253 (6%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 +R+ E +A +G + + + F P V +DI++ E ++ + + Sbjct: 43 YRQQLEDEAGKQLGIPVRIA-ELTGSWRGFEPLVVARDIQVGDGEQS---LRLARVRLAP 98 Query: 91 EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149 + L LL+ ++R+ + ++ L G + + L + ++ RI Sbjct: 99 DLLGSLLARQVRIGSLELEGLKLTLREGEDGQWSLDGLPHSDKPSDPRKLLQFLLQTQRI 158 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208 ++D + + +A L+ + S G + D + A Sbjct: 159 SLLDSQLEVAPR------GSAALSLSAVGATLRSSSVGGQSLDARLQLPDGQPLALHAEG 212 Query: 209 NFPAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 +++ + + L + + W + G F K L Sbjct: 213 RIDSEDWPRSSARFYLSLPQSDWAQWLPAGLTQEWKIARAKAGGDFWFDWRDGKAQRLVA 272 Query: 266 SAKKSRLSGNFKI 278 +L ++ Sbjct: 273 RLLAPQLKASYAA 285 >gi|116052508|ref|YP_792821.1| hypothetical protein PA14_58090 [Pseudomonas aeruginosa UCBPP-PA14] gi|115587729|gb|ABJ13744.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 1276 Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 33/253 (13%), Positives = 80/253 (31%), Gaps = 16/253 (6%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 +R+ E +A +G + + + F P V +DI++ E ++ + + Sbjct: 43 YRQQLEDEAGKQLGIPVRIA-ELTGSWRGFEPLVVARDIQVGDGEQS---LRLARVRLAP 98 Query: 91 EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149 + L LL+ ++R+ + ++ L G + + L + ++ RI Sbjct: 99 DLLGSLLARQVRIGSLELEGLKLTLREGEDGQWSLDGLPHSDKPSDPRKLLQFLLQTQRI 158 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208 ++D + + +A L+ + S G + D + A Sbjct: 159 SLLDSQLEVAPR------GSAALSLSAVGATLRSSSVGGQSLDARLQLPDGQPLALHAEG 212 Query: 209 NFPAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 +++ + + L + + W + G F K L Sbjct: 213 RIDSEDWPRSSARFYLSLPQSDWAQWLPAGLTQEWKIARAKAGGDFWFDWRDGKAQRLVA 272 Query: 266 SAKKSRLSGNFKI 278 +L ++ Sbjct: 273 RLLAPQLKASYAA 285 >gi|126452785|ref|YP_001067558.1| hypothetical protein BURPS1106A_3321 [Burkholderia pseudomallei 1106a] gi|242317493|ref|ZP_04816509.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei 1106b] gi|126226427|gb|ABN89967.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei 1106a] gi|242140732|gb|EES27134.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei 1106b] Length = 1397 Score = 64.5 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 31/249 (12%), Positives = 77/249 (30%), Gaps = 24/249 (9%) Query: 2 LRRVLIGLGFLFS---------VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKG 52 LRRV G+ + + + +P ++R E + + ++ + G Sbjct: 23 LRRVFKGVLAIAIAAYFIAATAFLGLRYLLLPRI---DEYRPRIEAFVSQKLHAELRI-G 78 Query: 53 GIKIHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111 + H P V + I ++ + + + L + + +D P Sbjct: 79 RLAPHWSGMQPGVDISRLTIRGRDG-RVALSVPHATAALLWRSLARFAPTLSSLVVDDPD 137 Query: 112 LNFYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 L + G + E I ++GG ++ D + D L+ Sbjct: 138 LLTERRADGSLFVAGVAVPTTKTGADDTFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELA 196 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 ++I+ ++ +++ + + G +F + + N + Sbjct: 197 LTGIRIAVLNDGLVHRIALQAPANGTLFHGPLDFRARFVHQALAPIGKPSNWTGDAYLST 256 Query: 224 FPLAYPIII 232 P+ P + Sbjct: 257 GPVDLPTLA 265 >gi|254238863|ref|ZP_04932186.1| hypothetical protein PACG_05030 [Pseudomonas aeruginosa C3719] gi|126170794|gb|EAZ56305.1| hypothetical protein PACG_05030 [Pseudomonas aeruginosa C3719] Length = 1276 Score = 64.5 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 33/253 (13%), Positives = 80/253 (31%), Gaps = 16/253 (6%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 +R+ E +A +G + + + F P V +DI++ E ++ + + Sbjct: 43 YRQQLEDEAGKQLGIPVRIA-ELTGSWRGFEPLVVARDIQVGDGEQS---LRLARVRLAP 98 Query: 91 EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149 + L LL+ ++R+ + ++ L G + + L + ++ RI Sbjct: 99 DLLGSLLARQVRIGSLELEGLKLTLREGEDGQWSLDGLPHSDKPSDPRKLLQFLLQTQRI 158 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208 ++D + + +A L+ + S G + D + A Sbjct: 159 SLLDSQLEVAPR------GSAALSLSAVGATLRSSSVGGQSLDARLQLPDGQPLALHAEG 212 Query: 209 NFPAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 +++ + + L + + W + G F K L Sbjct: 213 RIDSEDWPRSSARFYLSLPQSDWAQWLPAGLTQEWTIVRAKAGGDFWFDWRDGKAQRLVA 272 Query: 266 SAKKSRLSGNFKI 278 +L ++ Sbjct: 273 RLLAPQLKASYAA 285 >gi|218893567|ref|YP_002442436.1| hypothetical protein PLES_48551 [Pseudomonas aeruginosa LESB58] gi|218773795|emb|CAW29609.1| hypothetical protein PLES_48551 [Pseudomonas aeruginosa LESB58] Length = 1276 Score = 64.5 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 33/253 (13%), Positives = 80/253 (31%), Gaps = 16/253 (6%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 +R+ E +A +G + + + F P V +DI++ E ++ + + Sbjct: 43 YRQQLEDEAGKQLGIPVRIA-ELTGSWRGFEPLVVARDIQVGDGEQS---LRLARVRLAP 98 Query: 91 EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149 + L LL+ ++R+ + ++ L G + + L + ++ RI Sbjct: 99 DLLGSLLARQVRIGSLELEGLKLTLREGEDGQWSLDGLPHSDKPSDPRKLLQFLLQTQRI 158 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208 ++D + + +A L+ + S G + D + A Sbjct: 159 SLLDSQLEVAPR------GSAALSLSAVGATLRSSSVGGQSLDARLQLPDGQPLALHAEG 212 Query: 209 NFPAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 +++ + + L + + W + G F K L Sbjct: 213 RIDSEDWPRSSARFYLSLPQSDWAQWLPAGLTQEWTIVRAKAGGDFWFDWRDGKAQRLVA 272 Query: 266 SAKKSRLSGNFKI 278 +L ++ Sbjct: 273 RLLAPQLKASYAA 285 >gi|66047400|ref|YP_237241.1| hypothetical protein Psyr_4173 [Pseudomonas syringae pv. syringae B728a] gi|63258107|gb|AAY39203.1| Protein of unknown function DUF748 [Pseudomonas syringae pv. syringae B728a] Length = 1009 Score = 64.5 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 38/331 (11%), Positives = 95/331 (28%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R L V+ + FI +Q ++ ++ PF Sbjct: 16 MSRGLKRTLGSLLAVIALYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPF 72 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 73 TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRVELIKPRTELLFDKQG 130 Query: 121 VSNWFQ----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166 N Q + + +++I + GG + D Q D Sbjct: 131 KLNLAQLFKLPASEPTQDEPASKPFPLRIDEIKLAGGYVHFQDLRPSQPIEFLYDALDFE 190 Query: 167 LQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 L+ + + +++ + G + G + S + P A Sbjct: 191 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 250 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L + K S + + ++ +S + Sbjct: 251 LPLALEDGVLNFSTAYTLNLSKETELKLTNVSASVAPFALNAPDGRPLARLQRLDVSETS 310 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + Q + ++ + D + Sbjct: 311 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 341 >gi|160874828|ref|YP_001554144.1| hypothetical protein Sbal195_1711 [Shewanella baltica OS195] gi|160860350|gb|ABX48884.1| protein of unknown function DUF748 [Shewanella baltica OS195] gi|315267067|gb|ADT93920.1| hypothetical protein Sbal678_1750 [Shewanella baltica OS678] Length = 1161 Score = 64.5 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 47/380 (12%), Positives = 113/380 (29%), Gaps = 53/380 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR ++ S V +P I + + ++G+ + + G I+I+ Sbjct: 19 LRVLVYLTAVYLSYVCTLGLILPYAITT-----LAPEKLSALLGRPVTL-GDIRINPF-N 71 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL-SSK 119 V + I +K+ + + + F + + + +++I P+ + K Sbjct: 72 FKVEIDQLAIKEKD-EKPFAGLAQVQFEVNFWQSVFNRAAVIENIHIQAPYAHIIRVEKK 130 Query: 120 GVSNW-----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 G + + + V+L + + G+ D+ + Sbjct: 131 GKAGFNFDDILQTLNEHSSASTETTPAEASAPVRVLLSQFVLDAGQFNFDDKITHAQVNY 190 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 ++NL++S + + ++ SV N + + + + IQ Sbjct: 191 PNINLKLSQLD----TEYLMSALSASVAPATKANKTEANPTPNAQSASDTGSGSQVMPIQ 246 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 A + D G + G F + ++ K +L+ ++ D Sbjct: 247 HNHYAIQLSDDHAGEIS-------LQGQFQLFPLKVAG---DVHIAKLKLTPLWRFIDDQ 296 Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE-----SMHDLNETDFFEEE 337 + L + + +V E L + N + + E + Sbjct: 297 -------FKPALTDGEITAKTQYQVDLAENGELQVTSNNGQFIVEKLNFNDQERSVVKLP 349 Query: 338 EKKNKNDDLKKDDIQYSVNK 357 + Q +NK Sbjct: 350 IFALDGITMDLKQQQVRINK 369 >gi|331674762|ref|ZP_08375521.1| conserved hypothetical protein [Escherichia coli TA280] gi|331068201|gb|EGI39597.1| conserved hypothetical protein [Escherichia coli TA280] Length = 1266 Score = 64.5 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 38/322 (11%), Positives = 89/322 (27%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQI 169 + G N S + + + ++ + + + + L Sbjct: 115 FRTNTPITSGGGNASLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 170 SARFLNIISPLSIDSIKGS---VIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R +S+ S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGQVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|330987062|gb|EGH85165.1| hypothetical protein PLA107_18689 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 990 Score = 64.5 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 36/331 (10%), Positives = 91/331 (27%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R L V+V + FI +Q ++ ++ P+ Sbjct: 1 MSRGLKRTLGSLLTVIVLYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPY 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 58 TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRIELIKPKTELLFDKQG 115 Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168 N + + +++I + G + D Q LN + Sbjct: 116 KLNLAQLFKLPASEPAKDEPPGKPFPLRIDEIKLADGYVHFQDMRPSQPIEFLYDTLNFE 175 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 + + + G + G + S + P A Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L K S + + + ++ +S + Sbjct: 236 LPLALEDGVLNFSTAYTLNLAKETELKLTNVSASVAPFALNTPDGRPLVRLQRLDVSETS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + Q + ++ + D + Sbjct: 296 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 326 >gi|15599672|ref|NP_253166.1| hypothetical protein PA4476 [Pseudomonas aeruginosa PAO1] gi|9950713|gb|AAG07864.1|AE004861_5 hypothetical protein PA4476 [Pseudomonas aeruginosa PAO1] Length = 1276 Score = 64.5 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 33/253 (13%), Positives = 80/253 (31%), Gaps = 16/253 (6%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 +R+ E +A +G + + + F P V +DI++ E ++ + + Sbjct: 43 YRQQLEDEAGKQLGIPVRIA-ELTGSWRGFEPLVVARDIQVGDGEQS---LRLARVRLAP 98 Query: 91 EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149 + L LL+ ++R+ + ++ L G + + L + ++ RI Sbjct: 99 DLLGSLLARQVRIGSLELEGLKLTLREGEDGQWSLDGLPHSDKPSDPRKLLQFLLQTQRI 158 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208 ++D + + +A L+ + S G + D + A Sbjct: 159 SLLDSQLEVAPR------GSAALSLSAVGATLRSSSVGGQSLDARLQLPDGQPLALHAEG 212 Query: 209 NFPAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 +++ + + L + + W + G F K L Sbjct: 213 RIDSEDWPRSSARFYLSLPQSDWAQWLPAGLTQEWTIVRAKAGGDFWFDWRDGKAQRLVA 272 Query: 266 SAKKSRLSGNFKI 278 +L ++ Sbjct: 273 RLLAPQLKASYAA 285 >gi|257482254|ref|ZP_05636295.1| hypothetical protein PsyrptA_03232 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011506|gb|EGH91562.1| hypothetical protein PSYTB_17880 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 990 Score = 64.5 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 36/331 (10%), Positives = 91/331 (27%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R L V+V + FI +Q ++ ++ P+ Sbjct: 1 MSRGLKRTLGSLLTVIVLYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPY 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 58 TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRIELIKPKTELLFDKQG 115 Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168 N + + +++I + G + D Q LN + Sbjct: 116 KLNLAQLFKLPASEPAKDEPPGKPFPLRIDEIKLADGYVHFQDMRPSQPIEFLYDTLNFE 175 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 + + + G + G + S + P A Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L K S + + + ++ +S + Sbjct: 236 LPLALEDGVLNFSTAYTLNLAKETELKLTNVSASVAPFALNTPDGRPLVRLQRLDVSETS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + Q + ++ + D + Sbjct: 296 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 326 >gi|296391186|ref|ZP_06880661.1| hypothetical protein PaerPAb_23659 [Pseudomonas aeruginosa PAb1] Length = 1276 Score = 64.5 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 33/253 (13%), Positives = 81/253 (32%), Gaps = 16/253 (6%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 +R+ E +A +G + + + F P V +DI++ E ++ + + Sbjct: 43 YRQQLEDEAGKQLGMPVRIA-ELTGSWRGFEPLVVARDIQVGDGEQS---LRLARVRLAP 98 Query: 91 EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149 + L LL+ ++R+ + ++ L G + + L + ++ RI Sbjct: 99 DLLGSLLARQVRIGSLELEGLKLTLREGEDGQWSLDGLPHSDKPSDPRKLLQFLLQTQRI 158 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208 ++D + + +A L+ + S G + D + A Sbjct: 159 SLLDSQLEVAPR------GSAALSLSAVGATLRSSSVGGQSLDARLQLPDGQPLALHAEG 212 Query: 209 NFPAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 +++ + + + L + + W + G F K L Sbjct: 213 RIDSEDWLRSSARVYLSLPQSDWAQWLPAGLTQEWKIVRAKAGGDFWFDWRDGKAQRLVA 272 Query: 266 SAKKSRLSGNFKI 278 +L ++ Sbjct: 273 RLLAPQLKASYAA 285 >gi|148546221|ref|YP_001266323.1| hypothetical protein Pput_0978 [Pseudomonas putida F1] gi|148510279|gb|ABQ77139.1| membrane protein-like protein [Pseudomonas putida F1] Length = 1271 Score = 64.5 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 95/283 (33%), Gaps = 20/283 (7%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60 R +G+ L +V++ ++ + ++R D E +A +G + V G ++ H Sbjct: 13 RWGLGICALLAVLVALYVSLGRELVPLVAEYRADVESKAEQALGMPVHV-GALEGHWSGL 71 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSK 119 P + +D+++ + G+ +++ + + + L+ E+R+ + + L + + Sbjct: 72 APVLRVRDLQLGE---GTKALRLDDVMVVPDIWASLTAREVRLARIQLGGLQLILRENEQ 128 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 G + D + ++ GRI + D L L+ Sbjct: 129 GAWSLEGLPKKDDAPLDPADLLQRLRQLGRIDVFD-------SLVTLHPWQRDPLTLTYV 181 Query: 179 PLSIDSIKGSVIAEGTGNF-DNKRSAFKITANF---PAKNKAISLKIQLFPLAYPIIIDL 234 + + + D + A + + ++ + + L + + Sbjct: 182 SAGLQAGATRQALDLRATLPDGQPLALSLNSRMSADAWRDGEVEAYVSLPQSDWAHWLPP 241 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 W+ G F + +L + RL G + Sbjct: 242 RVLGQWHADTLRAGGEFWIGWSKGQLQRAVVRLNAPRLEGAYA 284 >gi|222110967|ref|YP_002553231.1| asma family protein [Acidovorax ebreus TPSY] gi|221730411|gb|ACM33231.1| AsmA family protein [Acidovorax ebreus TPSY] Length = 761 Score = 64.5 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 30/90 (33%), Gaps = 14/90 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56 LR L +G + + +++ + DW + + + G+ ++ G + Sbjct: 22 LRWTLGTIGAVVAALVLFIVVLVN-WDWNRAKPWVNDKVSEATGRTFSIDGDLSAEWHWP 80 Query: 57 --------HILPFPSVFFKDIRIDQKEDGS 78 +P +V + + + E Sbjct: 81 QPLEEGWRRWVPGVTVRAQQLSLSNPEGFE 110 >gi|94986802|ref|YP_594735.1| asmA protein [Lawsonia intracellularis PHE/MN1-00] gi|94731051|emb|CAJ54414.1| asmA protein [Lawsonia intracellularis PHE/MN1-00] Length = 670 Score = 64.5 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 37/338 (10%), Positives = 96/338 (28%), Gaps = 31/338 (9%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS 78 + ++ + + G+ + + P P + + Sbjct: 17 SGIAIFIYTNKDKITLAISKAVESATGQPLYTDSIPSLSFFPTPGIELGKSSWGNPDTNE 76 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL--------------SSKGVSNW 124 ++ R L L +G I + +++ +QP + +S N Sbjct: 77 ISVELIKCVFRFSLLKLFTGTIAIDEIFFEQPSIIIQKKNAQNKKIQSTAAVTSTNAINP 136 Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 + K + + + + +K G +K D + L + + + Sbjct: 137 QEDKKASFQLPEISISSVTIKDGMLKFFDGRKQIILTGLQLTAKNIYPQSTGKISIHTQA 196 Query: 185 I----KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 + S + EG + ++ I N L + + PI I+ G + Sbjct: 197 LFQPENISFVTEGNVSIILDKNILSIEHIKFIINPKTGLTV-----STPITIEGNGRYLF 251 Query: 241 N-EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI---LPN 296 + + N S + ++L G + + + + + + Sbjct: 252 DKNLLEKSDIQVKLDQFKI---NANGSLELNKLQGT-AVINASGSLKKLASTLGMMLITP 307 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334 + +N + S+ + N + M D ++ Sbjct: 308 ETKIFENFSAQSKVQVNGQYIQLTDLKIMLDDSQVTGK 345 >gi|330888651|gb|EGH21312.1| hypothetical protein PSYMO_07285 [Pseudomonas syringae pv. mori str. 301020] Length = 990 Score = 64.5 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 36/331 (10%), Positives = 91/331 (27%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R L V+V + FI +Q ++ ++ P+ Sbjct: 1 MSRGLKRTLGSLLTVIVLYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPY 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 58 TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRIELIKPKTELLFDKQG 115 Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168 N + + +++I + G + D Q LN + Sbjct: 116 KLNLAQLFKLPASEPAKDEPPGKPFPLRIDEIKLADGYVHFQDMRPSQPIEFLYDTLNFE 175 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 + + + G + G + S + P A Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSRMKLWWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L K S + + + ++ +S + Sbjct: 236 LPLALEDGVLNFSTAYTLNLAKETELKLTNVSASVAPFALNTPDGRPLVRLQRLDVSETS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + Q + ++ + D + Sbjct: 296 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 326 >gi|154490148|ref|ZP_02030409.1| hypothetical protein PARMER_00378 [Parabacteroides merdae ATCC 43184] gi|154089040|gb|EDN88084.1| hypothetical protein PARMER_00378 [Parabacteroides merdae ATCC 43184] Length = 1130 Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 34/298 (11%), Positives = 85/298 (28%), Gaps = 39/298 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLF---------IDWTDFREDFERQATLIVGKKIAVKG 52 ++R L + + F +P + QA + + + Sbjct: 38 MKRKKKILTIIVLATITLIFILPAIGFSILNWGVLPPEKLTPLVIEQANKFIDAHLDCE- 96 Query: 53 GIKIHIL---PFPSVFFKDIRIDQKE-------------DGSFESKIEGLSMRAEFLPLL 96 +++ P+ V + + ++ + L L Sbjct: 97 RVELTYFETYPYLGVKLTNGHLISHAAEDSTAHEEELAIPSDSLLAFNRATLSLQPLDYL 156 Query: 97 SG-EIRVFDMYIDQPHLNFYLSSKGVSNWF---------QRKSTMDMIHNVILEKIHVKG 146 G +I + D I+ P +++ G +NW + + + + L+K+ + G Sbjct: 157 FGSKITIKDFSIENPRFYGFVNKNGRANWDIYESETDSTETDAGKKPLPPIDLQKVRIYG 216 Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN--FDNKRSAF 204 G D+++D + +++ + L ++ S++ ++ Sbjct: 217 GHFTYDDRQADLFTEMQGFFVRLDGSLAGGANTLDLEMGCSSLLFSNPTYTLKNDLSLHL 276 Query: 205 KITANFPAKNKAISLK-IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261 K + +LK +L P D F + + L Sbjct: 277 KSRLVLAEHYNSTTLKDAELKVNNLPFTADGTIRHFPENRHTRIDMDMGLKISDMNDL 334 >gi|289627540|ref|ZP_06460494.1| hypothetical protein PsyrpaN_20827 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646968|ref|ZP_06478311.1| hypothetical protein Psyrpa2_04332 [Pseudomonas syringae pv. aesculi str. 2250] gi|330868253|gb|EGH02962.1| hypothetical protein PSYAE_13582 [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 990 Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 36/331 (10%), Positives = 91/331 (27%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R L V+V + FI +Q ++ ++ P+ Sbjct: 1 MSRGLKRTLGSLLTVIVLYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPY 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 58 TLELTLWGLNIGTP--GKEQVAFEKLYANLQIDSLWTRALHLQRIELIKPKTELLFDKQG 115 Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168 N + + +++I + G + D Q LN + Sbjct: 116 KLNLAQLFKLPASEPAKDEPPGKPFPLRIDEIKLADGYVHFQDMRPSQPIEFLYDTLNFE 175 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 + + + G + G + S + P A Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L K S + + + ++ +S + Sbjct: 236 LPLALEDGVLNFSTAYTLNLAKETELKLTNVSASVAPFALNTPDGRPLVRLQRLDVSETS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + Q + ++ + D + Sbjct: 296 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 326 >gi|152984193|ref|YP_001350426.1| hypothetical protein PSPA7_5090 [Pseudomonas aeruginosa PA7] gi|150959351|gb|ABR81376.1| hypothetical protein PSPA7_5090 [Pseudomonas aeruginosa PA7] Length = 1275 Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 32/253 (12%), Positives = 79/253 (31%), Gaps = 16/253 (6%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 +R+ E +A +G + + + F P V +DI++ + G ++ + + Sbjct: 43 YRQQLEDEAGKQLGIPVRIA-ELSGSWRGFEPLVVARDIQLGEDPQG---LRLARVRVVP 98 Query: 91 EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149 + L LL+ + R+ + ++ L + G + + L ++ RI Sbjct: 99 DLLGSLLARQARIASLELEGLKLTLREGADGQWSLDGLPRSDKPSDPRQLLNFLLQTQRI 158 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208 ++D + + + + + L S+ G + D + A Sbjct: 159 SLLDSQLEVAPRGRK-----TLSLSALGATLRSSSVAGQ-RLDARLTLPDGQPLALHAEG 212 Query: 209 NFPAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 ++ + + L + + W + G F K L Sbjct: 213 RIKPEDWLRSNARVYLGLPQSDWAQWLPAGLTGEWKIARAKAGGDFWFDWRDGKAQRLVA 272 Query: 266 SAKKSRLSGNFKI 278 +L ++ Sbjct: 273 RLLAPQLKASYAA 285 >gi|310778410|ref|YP_003966743.1| protein of unknown function DUF490 [Ilyobacter polytropus DSM 2926] gi|309747733|gb|ADO82395.1| protein of unknown function DUF490 [Ilyobacter polytropus DSM 2926] Length = 1482 Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 58/387 (14%), Positives = 109/387 (28%), Gaps = 35/387 (9%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +LR+ V+L+ + VG I ++ I Sbjct: 4 LLRKYHKVFAAFVVVILIMISYSLYTTVRYSLPQTVRTILIKAVGPDIEMQ---SIKFRE 60 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 F + + + K+ + +R F ++ G I + I P + Sbjct: 61 FGRIEASGVTL--KDGEELILSAPKVEVRYSFRRIIKGRI--DSIDIKNPKVWISRDKNN 116 Query: 121 VSNW---------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 N + ST V ++ I GG + D ++ + N++ Sbjct: 117 NINIVKAFSKKSQSGKSSTSKAGTGVPIDMITATGGELIYRDIAYERPIEKTVYNVKGYV 176 Query: 172 RFLNII-SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 F L D G + ++ R A I N N + + Sbjct: 177 SFHKDKGINLDFDGDIGEEKYRFLFDNNDTRYALGIKLNNININNNLMQYAYNSEKISYL 236 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 + +L SG F + + LS +SGN + + I Sbjct: 237 SGTVNLDLTLKPGSFTGSGDFR----NASVTYEGLSGTPENISGNVSFNGDKIYI----- 287 Query: 291 QSILPNSSTDEDN-KTKVSQDEENLLNFSENGAESMHD---LNETDFFEEEEKKNKNDDL 346 NS D D K + + D L + D + ++ K + Sbjct: 288 -----NSDYDFDGKKGQFLLSLVRKERLDLDFYFKDVDYAFLEKYDLLKRQKFPLKGTEF 342 Query: 347 KKDDIQYSVNKKEEKDNSHDKENQENF 373 + + NK + + D ++ E F Sbjct: 343 DLVHVNLNFNKDYKLAVNVDFKSPEYF 369 >gi|302185439|ref|ZP_07262112.1| hypothetical protein Psyrps6_03814 [Pseudomonas syringae pv. syringae 642] Length = 994 Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 37/331 (11%), Positives = 95/331 (28%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R L V+ + FI +Q ++ ++ P+ Sbjct: 1 MSRGLKRTLGSLLAVIALYSLLGFFILPGVALRIANQQLASYATVPAKLE---RLEFNPY 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 58 TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRVELIKPRTELLFDKQG 115 Query: 121 VSNWFQRKSTMDM----------IHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166 N Q + +++I + GG + D Q D Sbjct: 116 KLNLAQLFKLPASEPTKDEPATKPFPLRIDEIKLAGGYVHFQDLRPSQPIEFLYDALDFE 175 Query: 167 LQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 L+ + + +++ + G + G + S + P A Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L + K S + + + ++ +S + Sbjct: 236 LPLALEDGVLNFSTAYTLNLSKETELKLTNVSASVAPFALNAPDGRPLVRLQRLDVSETS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + Q + ++ + D + Sbjct: 296 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 326 >gi|260886517|ref|ZP_05897780.1| conserved hypothetical protein [Selenomonas sputigena ATCC 35185] gi|330839640|ref|YP_004414220.1| protein of unknown function DUF490 [Selenomonas sputigena ATCC 35185] gi|260863660|gb|EEX78160.1| conserved hypothetical protein [Selenomonas sputigena ATCC 35185] gi|329747404|gb|AEC00761.1| protein of unknown function DUF490 [Selenomonas sputigena ATCC 35185] Length = 1444 Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 44/339 (12%), Positives = 101/339 (29%), Gaps = 32/339 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFT---VPLFIDWTDFRED----FERQATLIVGKKIAVKGGI 54 +++ I + + + A + E+ +A+ +G +A+ Sbjct: 1 MKKGSIVFAAVVIALFLFALVCGTAAYIARTGAYVEEAGRTLSAKASESLGVPVAID--- 57 Query: 55 KIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIR--VFDMYIDQPHL 112 + + + ++ I + + + + LS + + + +P L Sbjct: 58 AVRVESWHTLALDGIAVQDRAG-EEILRAAHAEVEMSLFAALSASPVAAISHVTVIEPEL 116 Query: 113 NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + G N ++ K+ VK G+ + S + L D+ ++ Sbjct: 117 SLQQRADGSWNVADLVQQEAGGNDFC-GKVSVKEGKANV--AVSGKEIALEDIGAELDFV 173 Query: 173 FLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 + +S + S KG + EG + + + K A + L P Sbjct: 174 HKSSVSVEAEASCKGAPLAVEGEVSKERQELKLKGENINAMDYIAFLPEGVLPDEIEPQA 233 Query: 232 IDLFGNLFW---NEKQPIYSGVFSVAGDFSK--LLNLELSAKKSRLSGNFKISDGNVRIS 286 + + + +G ++G + + +E S SG Sbjct: 234 LHVDETVLKLVREADDVSLAGDVRLSGAKALVHGMEVEASRGLVVFSGKEA--------- 284 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 R L++ T K +E NF A Sbjct: 285 RIFLRASAEEQQTSIHGKVAWQ-EEVPSFNFVVESAAFD 322 >gi|58584381|ref|YP_197954.1| hypothetical protein Wbm0121 [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418697|gb|AAW70712.1| Uncharacterized protein involved in outer membrane biogenesis [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 856 Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 34/310 (10%), Positives = 94/310 (30%), Gaps = 33/310 (10%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--- 78 F DW ++E + K+ + G +++ ++ P + ++ + + Sbjct: 20 VTVTFKDWDSYKEYIVQGLEKTYNAKVHIGGKVEVSLI-TPKLTVHNVYMQCNNNKEQKL 78 Query: 79 -FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV 137 + + +R L L ++ + + N N+ + + V Sbjct: 79 STLIGVNKIEVRPSILSLFLFSLQPKSITLLGMKSN-------RENFINIINAKTSSNAV 131 Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197 + +KG ++ + + +D + I + S + S + +G Sbjct: 132 DI---VIKGSQVSLNNNFTDYDNIV-----NIEKVAIGKSKQFSGEIRVDSNDYDFSGKV 183 Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257 + + I+ N + K L + + + + + Sbjct: 184 NITKKNVHISVESNFINLLFTGKKNQAGLQGKLTLTINNSSDFINDLAKI--------TN 235 Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317 L + + +S N + + + K++S +S N + N N Sbjct: 236 LSFLAYVIPGENIEISSNIDFNGNDFTATDLKIKSKSMQASGIIQND-----RKSNHTNI 290 Query: 318 SENGAESMHD 327 + + ++ D Sbjct: 291 NISFSKVNLD 300 >gi|77747532|ref|NP_298416.2| hypothetical protein XF1126 [Xylella fastidiosa 9a5c] Length = 1279 Score = 64.1 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 35/318 (11%), Positives = 83/318 (26%), Gaps = 22/318 (6%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60 R V +F V + + + + ++ G+ + + Sbjct: 12 RYVAYVCVGVFVAVALAMGILSQLLPVVERHPQQVADWLSVRTGQPVRFD-TLNTSWTQR 70 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 P + + +RI I + + L + ++ + L + S G Sbjct: 71 GPLLRLQGVRI----GPQGRMAIGEVEVLVAMYTGLLPGHSLIELRLRGMALTVHRDSAG 126 Query: 121 VSNWFQRKSTMDMIHN---VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 + + + L ++ V GGR+ + S LS +NL++ + Sbjct: 127 RWSVYGLPRDVGGDPLEVLRRLGELQVIGGRLSVDAPSSGVSTTLSQINLRVRVAGDRLR 186 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 + + G +FD + A + + + D G+ Sbjct: 187 AGVHGWLDSARAPVTGVVDFDRVSGDGDVYVETLPNQLASWSSLLAGVMRGVHLRDGAGH 246 Query: 238 LFWNEKQPI-------YSGVFS---VAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285 + + G G + +L ++ R+ Sbjct: 247 VRAWAQLHRHHVEQVTVQGDLQGVRFEGVRLAGQTVVPRVFWPQLQALVRWQRQGDGWRV 306 Query: 286 SRYKLQSILPNSSTDEDN 303 +L+ D Sbjct: 307 VAPRLRMGESGRLQKLDG 324 >gi|83954336|ref|ZP_00963056.1| hypothetical protein NAS141_18559 [Sulfitobacter sp. NAS-14.1] gi|83841373|gb|EAP80543.1| hypothetical protein NAS141_18559 [Sulfitobacter sp. NAS-14.1] Length = 1114 Score = 64.1 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 43/414 (10%), Positives = 107/414 (25%), Gaps = 47/414 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVP--LFIDWTDFREDFERQATL-----IVGK-KIAVKGGI 54 + L+ + + + + A + + E + +G ++ + Sbjct: 21 KWSLLVISLIVATIAGAAIYMIRSPIVVPEWLETRIEERFAKDMPLARIGFGEMVLIVDE 80 Query: 55 KIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 P V +D+ I + S + + LL+G+++ D+ + N Sbjct: 81 GWR----PRVRLRDVNITNPQGVS-FAAFREVRASFSIQGLLAGDVQPRDIAMSGVVANL 135 Query: 115 YLSSKGVSNWFQRKSTMDMIHNV--------------------ILEKIHVKGGRIKIIDQ 154 G T L I ++ ++ D Sbjct: 136 RRDKDGRVALSAASGTAPAERRAATMPQLIGQLDTVFETKALSRLRSIELRALTLRYTDL 195 Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214 +S +++ + L + N+ + + G A + + + + Sbjct: 196 QSGRMWTVDGGRLLLDREGDNLRMTAELAVLGGGADAATLSANYSSKIGDTASQFGVNFD 255 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLF-WNEKQPIYSGVFSVAGDFSKLLN----LELSAKK 269 + I + A+ + L ++ G F ++ A Sbjct: 256 GVSAGDIAVQNPAFAWLKVLRASISGSVRSSLDEDGTFEPLNATLQIGAGVVQPNERATP 315 Query: 270 SRLSG-----NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL-NFSENGAE 323 G ++ +R ++ S + + D+ L Sbjct: 316 IPFDGARSYFSYDPDQRLLRFDELSVE--SKWVSGRIEGAASLGIDDSGKLGELVAQVRL 373 Query: 324 SMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 + D + + + DL + + + D N SGD Sbjct: 374 RDLVADPADIY-DTPVSIEGADLDAKITFNPFHMSVGRMDIVDGGTTLNLSGDL 426 >gi|332709310|ref|ZP_08429272.1| hypothetical protein LYNGBM3L_38760 [Lyngbya majuscula 3L] gi|332351856|gb|EGJ31434.1| hypothetical protein LYNGBM3L_38760 [Lyngbya majuscula 3L] Length = 2012 Score = 64.1 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 33/308 (10%), Positives = 92/308 (29%), Gaps = 14/308 (4%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +LR V + + + + G + E+ + + +K+ V + Sbjct: 31 LLRPVFMLMVMILVSGIGGGSLFAWYFIQKQLAPTVEKNLSSFLNRKVNVGPVEGFSLN- 89 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK- 119 V F +I E + + + LL D+ + +P++ Sbjct: 90 --GVRFGSSQIPATPTDPDHLFTEAVKVSYNPVKLLFTRTLELDVTLVEPNIYVEQDKDL 147 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE----SDQVYFLSDLNLQISARFLN 175 + ++ D V + + + + ++ + +++ + Sbjct: 148 NWVSTAFTQTAQDSAFKVDPKVVRWRDADVVVVPRSEVGIKQPPMRFTEVRGKSKFIDGG 207 Query: 176 IISPLSIDSIK---GSVIAEGTGNFDNKRSAFKITA-NFPAKNKAISLKIQLFPLAYPII 231 + ++S G++ +G + + + N A + L I L + Sbjct: 208 ELIRFDVNSQPLSGGNLKVKGDYRLSQEETDLHLDVDNVSAAEVSKVLLIPLKLQGGKLG 267 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 +L E+ Y G + + ++L L +S +G + ++ + Sbjct: 268 GNLRIQRNNAEQPWQYWGTINFSDTIARLEPLPQLFTES--NGKLSFRGSQIWLNNITTR 325 Query: 292 SILPNSST 299 + Sbjct: 326 FGQVPAQI 333 >gi|312963075|ref|ZP_07777560.1| domain of unknown function (DUF748) family [Pseudomonas fluorescens WH6] gi|311282586|gb|EFQ61182.1| domain of unknown function (DUF748) family [Pseudomonas fluorescens WH6] Length = 642 Score = 64.1 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 37/331 (11%), Positives = 93/331 (28%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + LI L + I +Q ++ +I + PF Sbjct: 1 MPKGLIRAVGALLTALALYSLLGFLILPGIALRIANQQLAHYATVPARIE---RIELNPF 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 V ++I G + E L + L + + + D+ +DQP G Sbjct: 58 SLEVTAWGLKIGDP--GKEQVGFERLYANLQIDSLWTRALHLADVQLDQPKTELLFDKSG 115 Query: 121 VSNWFQ----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166 N Q + ++ I + GG + D + D Sbjct: 116 QLNLAQLFKLPPSEPTPADPEAKPFPLRIDNIKLAGGYVHFQDLRPSEPIEFLYDTLDFE 175 Query: 167 LQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 L+ + + +++ + G + +G + S + P A Sbjct: 176 LKNLSTLPEDNADMTLVAAGPEGGQIDWKGNFSLIPITSKGTLKVTDGKMKAWWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + + + + + ++ +S Sbjct: 236 LPLVLEDGVLNFSTDYTFSLAKETELNLTNTAASIAPFAIKAPDGRPLVRLERLDVSETT 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ +V + + + + ++ + D + Sbjct: 296 VDLAKQHVVVGKIRSNKLETWAAREADGQLD 326 >gi|330937954|gb|EGH41741.1| hypothetical protein PSYPI_04643 [Pseudomonas syringae pv. pisi str. 1704B] Length = 994 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 38/331 (11%), Positives = 95/331 (28%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R L V+ + FI +Q ++ ++ PF Sbjct: 1 MSRGLKRTLGSLLAVIALYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPF 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 58 TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRVELIKPRTELLFDKQG 115 Query: 121 VSNWFQRKSTMDM----------IHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166 N Q + +++I + GG + D Q D Sbjct: 116 KLNLAQLFKLPASEPAKDEPATKPFPLRIDEIKLAGGYVHFQDLRPSQPIEFLYDALDFE 175 Query: 167 LQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 L+ + + +++ + G + G + S + P A Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPIASEGTLKVTDSKMKLWWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L + K S + + + ++ +S + Sbjct: 236 LPLALEDGVLNFSTAYTLNLSKETELKLTNVSASVAPFALNAPDGRPLVRLQRLDVSETS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + Q + ++ + D + Sbjct: 296 VDLAKQLVTVGKVRSQKLETWAAREADGQLD 326 >gi|330895297|gb|EGH27635.1| hypothetical protein PSYJA_00785 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 990 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 38/331 (11%), Positives = 96/331 (29%), Gaps = 35/331 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R L V+ + FI +Q ++ ++ PF Sbjct: 1 MKRTL----GSLLAVVALYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPF 53 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 54 TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRVELIKPRTELLFDKQG 111 Query: 121 VSNWFQRKSTMDM----------IHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166 N Q + +++I + GG + D Q D Sbjct: 112 KLNLAQLFKLPASEPAKDEPATKPFPLRIDEIKLAGGYVHFQDLRPSQPIEFLYDALDFE 171 Query: 167 LQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 L+ + + +++ + G + G + S + P A Sbjct: 172 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 231 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L + K S + + + ++ +S + Sbjct: 232 LPLALEDGVLNFSTAYTLNLSKETELKLTNVSASVAPFALNAPDGRPLVRLQRLDVSETS 291 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + Q + ++ + D + Sbjct: 292 VDLAKQLVTVGKVRSQKLETWAAREADGQLD 322 >gi|302185326|ref|ZP_07261999.1| hypothetical protein Psyrps6_03244 [Pseudomonas syringae pv. syringae 642] Length = 1271 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 101/307 (32%), Gaps = 19/307 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A+ +G +++ G ++ F Sbjct: 13 RWGLSLCALILVLAALYVSLGRQLTPLVAEYRVDVETRASSALGIPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + D+ + + GS +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVLLAHDVMVGE---GSSALRLDRVRVVPDLWESLLARDVRIAHLEVDGLQFSLIQDKD 128 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 G + D + + ++ ++ D + + A Sbjct: 129 GAWSVQGLPVHNDSPFDP---EQVLRQMQMVAHLSLLDSQVTVQPFDA---APLTLTYVN 182 Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235 LS+D+ + + D + A + + K+ + L + + Sbjct: 183 LSLDTGSYAQRLDARLTLPDGQPVALNVRSRIQASQWKDGEADVYASLPQSDWAKWMPKS 242 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 W + G ++ + + ++ G + + I+ L + Sbjct: 243 LTREWTLSKLQAGGEVWLSWGKGTVQSATTRLNAPQVKGVYAGRKPS-TINNLALNAWFA 301 Query: 296 NSSTDED 302 + T D Sbjct: 302 RTDTGFD 308 >gi|17229922|ref|NP_486470.1| hypothetical protein all2430 [Nostoc sp. PCC 7120] gi|17131522|dbj|BAB74129.1| all2430 [Nostoc sp. PCC 7120] Length = 2048 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 31/295 (10%), Positives = 80/295 (27%), Gaps = 12/295 (4%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +L R + +G L V L+G + + T + + + + + Sbjct: 22 ILSRGGMAVGGLLIVGLMGGVWRLWTFVQRELTPLAQESLTTTLNRPVQLGKVTNFSL-- 79 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 V F I + ++ + + L L+ ++ + P + ++G Sbjct: 80 -TGVQFAASSIPPTPTDPDKLTVDAVEVGFNPLLLVFNRQLKLNVTLVNPDVYIEQDNQG 138 Query: 121 VSNWFQ-RKSTMDMIHNVILEKIHVKGGRIKI----IDQESDQVYFLSDLNLQISARFLN 175 L+ I+ + G++ + + + S + Sbjct: 139 RWITTTIAPPGAAGAIKTDLDHINFRNGKLSLLPQVRNLAVGEAKTTSPSSSLYPPTSCP 198 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 L + +N+ F ++ ++ ++ P I + Sbjct: 199 QPPCLLPPLEFSQLNGTAQLLENNQLIKFSAK-GLSDSGGSVDMEGEVRPKTTAANIQVR 257 Query: 236 GN---LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 G + + L + + L G+ + V+I R Sbjct: 258 GQELLAADVTRLVKLPVGLAAGKVNGDLRVELVPGQTPLLYGSADLQKVTVQIPR 312 >gi|330969659|gb|EGH69725.1| hypothetical protein PSYAR_04113 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 994 Score = 63.8 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 37/331 (11%), Positives = 95/331 (28%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R L V+ + FI +Q ++ ++ PF Sbjct: 1 MSRGLKRTLGSLLAVIALYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPF 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 58 TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRVELIKPRTELLFDKQG 115 Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166 N + + +++I + GG + D Q D Sbjct: 116 KLNLAQLFKLPASEPAQDQPASKPFPLRIDEIKLAGGYVHFQDLRPSQPIEFLYDALDFE 175 Query: 167 LQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 L+ + + +++ + G + G + S + P A Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L + K S + + + ++ +S + Sbjct: 236 LPLALEDGVLNFSTAYTLNLSRETELKLTNVSASVAPFALNAPDGRPLVRLQRLDVSETS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + Q + ++ + D + Sbjct: 296 VDLAKQLVTVGKVRSQKLETWAAREADGQLD 326 >gi|114764581|ref|ZP_01443785.1| hypothetical protein 1100011001360_R2601_26926 [Pelagibaca bermudensis HTCC2601] gi|114542957|gb|EAU45977.1| hypothetical protein R2601_26926 [Roseovarius sp. HTCC2601] Length = 1097 Score = 63.8 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 37/332 (11%), Positives = 88/332 (26%), Gaps = 34/332 (10%) Query: 8 GLGFLFSVVLVGAFTVP--LFIDWTDFREDFERQATLIV-GKKIAVKGGIKIHILPF--P 62 + L + A + RE E + + G I G + + + Sbjct: 32 VVMVLALIAGGAALVLVGRPLSAPDWLRESIEARLDEALPGLTIDF-GDVSVLVERDGLA 90 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 V D+ + Q DG + + L + LPLL GE+++ + + ++ +G Sbjct: 91 RVVLSDVDL-QTSDGVPVATLADLRAGLDPLPLLRGELQLGRVSLAGASMSLRRDREGRV 149 Query: 123 NWFQRKSTMDMIHNVILEKI------HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 + + I + R + + + + + + + Sbjct: 150 GLALGDAFSSDTKAPDIPTIIAQIDAALSDPRFDSLRRIEAEALTIRYEDARAGRGWTAD 209 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNK---RSAFKITANFPAKNKAISLKIQLFPLA------ 227 LS+ G++ G + + A ++ + L L Sbjct: 210 GGRLSLTREDGTLRLAGDVALLGAGDVAATLALNAESVIGEQSAQFGMNLSALPAQDIAT 269 Query: 228 ------------YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 PI L G + + + + + Sbjct: 270 QSPALVWLSGLRAPISGALRGTMTETGELGALNATLQIGAGVLQPNPRTQPIPFGLARTY 329 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 F + +S ++ + D + + Sbjct: 330 FSYDPASQALSFDEITVQSAVGTVISDGRAVL 361 >gi|305665194|ref|YP_003861481.1| putative outer membrane protein [Maribacter sp. HTCC2170] gi|88709946|gb|EAR02178.1| putative outer membrane protein [Maribacter sp. HTCC2170] Length = 909 Score = 63.8 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 47/388 (12%), Positives = 112/388 (28%), Gaps = 56/388 (14%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58 M +++L +G + + +V P E + I+ K + Sbjct: 1 MKKKILKIIGVVLLIFVVLVVAAPFV---------LEAKIGDILKKNVNNNVNAAFDFSE 51 Query: 59 --------LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE---IRVFDM 105 P V KD+ + K G + +R L GE I + ++ Sbjct: 52 ANLSLIKSFPNAKVELKDVTVINKAPFEGDTLFAAGRVDLRMGIGELFKGEGEPIGIKNL 111 Query: 106 YIDQPHLNFYLSSKGVSNWFQRKST------MDMIHNVILEKIHVKGGRIKIIDQESDQV 159 +D+ ++ ++ + ++N+ + L+ + + D+ + Sbjct: 112 IVDKAKISVNVNEEEIANYEIANEDGNEELESSEGFTLNLQSYEITNSEVIYDDKAAKVY 171 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218 +SD+ + S + S L + + + T + + + Sbjct: 172 LVVSDIMHRGSGDLSAVTSELDTKTEALVTFELDSTNYLNRNKVKLDALVGVDLAADKYT 231 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS------------ 266 ++ + + + G + NE+ F+ K + Sbjct: 232 F-LKNEAMINQLPLVFDGYVKVNEENQEVDISFNTPSSDFKNFLALIPQAYSKDIKNVKT 290 Query: 267 AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + + G FK I ++K+ N+S + L + Sbjct: 291 TGECLVKGEFKGIVDEEHIPKFKIDIQSENASF-----------KYPDLPKTVQNININM 339 Query: 327 DL-NETDFFEEEEKKNKNDDLKKDDIQY 353 L N T E+ + D+ ++ Sbjct: 340 ALHNSTGIVEDTYVEINKASFIIDEDRF 367 >gi|153876016|ref|ZP_02003549.1| AsmA [Beggiatoa sp. PS] gi|152067521|gb|EDN66452.1| AsmA [Beggiatoa sp. PS] Length = 83 Score = 63.8 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 33/76 (43%), Gaps = 2/76 (2%) Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--E 80 + LF+D D + + T G+ ++++ I + P+ + + + Sbjct: 2 ILLFVDPNDHKAEISAFLTEKTGRTVSIQDDIGYTLYPWLGLDLGKMSVGNAPGFEEPLF 61 Query: 81 SKIEGLSMRAEFLPLL 96 ++I+ +R + +PLL Sbjct: 62 AQIDQAKVRVKLIPLL 77 >gi|254000452|ref|YP_003052515.1| hypothetical protein Msip34_2751 [Methylovorus sp. SIP3-4] gi|253987131|gb|ACT51988.1| protein of unknown function DUF748 [Methylovorus sp. SIP3-4] Length = 1199 Score = 63.8 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 43/360 (11%), Positives = 119/360 (33%), Gaps = 39/360 (10%) Query: 2 LRRVLIGLGF-LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +R +L+ F +F+ V++ R A + + +V+ + P Sbjct: 5 IRTLLLTTPFKIFAGVVIAYLLFAYLAVDPLARRILPWFAETKLASQASVE---HVKFDP 61 Query: 61 -FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + +++ +++G + + L + E L+ R+ D+ + PH+ + + Sbjct: 62 LRLILTIDQLKL-NQKNGVPLASFDRLYVNLETSGLVRFAWRIKDIRLTAPHVAVEVGAD 120 Query: 120 GVSNWFQR---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 G NW + + ++++ I ++GG + +++ Q + L+ L + Sbjct: 121 GRLNWADLIARLNEDKDDTPSTSMPRLLIDHILIEGGDVAYVERNRPQPFELALQPLGLE 180 Query: 171 ARFLNI--------ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--------FPAKN 214 L+ + + + GS+ G + S + K+ Sbjct: 181 LDGLSTLPEDRGDYLIVAKLPADGGSLKWRGDIGLNPLVSQGVLELQGIKLAPLMQIVKH 240 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQP-----IYSGVFSVAGDFSKLLNLELSAKK 269 +A+ +++ L + +++ P + ++ +++ A+ Sbjct: 241 QALPVRLTQGELQSRLTYSFAMVKGADQQDPTPEAIVQDLSLALDNVAAEVQGQHGPAQL 300 Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE-NGAESMHDL 328 + + S K + + K + Q + L + +DL Sbjct: 301 HL--KQVSVGMPRLDFSMRKGTELTFKNMRLGLQKLTLQQAKTPLFQLDAIDVQGVDYDL 358 >gi|71738093|ref|YP_273815.1| hypothetical protein PSPPH_1565 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558646|gb|AAZ37857.1| conserved hypothetical protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 355 Score = 63.8 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 33/337 (9%), Positives = 96/337 (28%), Gaps = 24/337 (7%) Query: 2 LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++R L L L +++ +P + R+ + + + + + + Sbjct: 1 MKRRYSWPLWTLAALVVLLIAVNIALPYLV-----RDYLNDKLADMGDYRGEIT-DVDLA 54 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + + K ++I + + + + + L V P +NF Sbjct: 55 LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTGPQINFV 113 Query: 116 LSSKGVSNWFQRKSTM----DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 ++ + + D + + L ++ + GRI + S + + S Sbjct: 114 DGGSKQNSQTGQGTDWRTQMDKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQVNASI 173 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230 L + + + +G + + + K++ + Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESSARFDPFSNFEDFDFKLRATGIQLKK 230 Query: 231 IIDLF---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 + D G +N L + + + + + + R Sbjct: 231 LNDFSSAYGKFDFNAGDGDLVIEAQADKGQLSGYIKPLLRNVDAFNWHQDVENKDKGVFR 290 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 ++++ S T N+ + L+ S + + Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327 >gi|254423699|ref|ZP_05037417.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] gi|196191188|gb|EDX86152.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] Length = 1811 Score = 63.8 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 32/311 (10%), Positives = 86/311 (27%), Gaps = 26/311 (8%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93 + + + + V I E ++ + ++ Sbjct: 58 PRVTASVDEAINRPTELGDVTGLTFW---GVRLGKSVIPPTETDLSSITVDEIEVKIGLR 114 Query: 94 PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI--LEKIHVKGGRIK- 150 L+ +I ++ + +P ++ S G F+ + + + ++ I ++ + Sbjct: 115 SLILQQIAKSEIVLVRPDISLVQSEDGTWTDFELPESEEAESRIKSEIQSIKIEDASVTA 174 Query: 151 --IIDQE-----SDQVYFLSDLNLQISARFLNI---ISPLSIDSIKGSVIAEGTGNFDNK 200 ID + ++ + D ++ + + + G G GN + + Sbjct: 175 VPFIDPDLPAIVPREIVQVRDTDVLVEFFGEGAKEFTFDAAGELDSGDFALNGNGNLNTQ 234 Query: 201 RSAFKITA-NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ---PIYSGVFSVAGD 256 + A + P I L L ++ + +L + + + Sbjct: 235 TVKAAVRADDVPVTGVNIFLPDSLGLVSGELDGNLTLLTALVDGGLDESVTDIKGVASLQ 294 Query: 257 FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN 316 + L +LSA + +V + L+ V +E + Sbjct: 295 NGEFLASQLSAPVEDIRSQLVFKGQSVTVEDTSLEL----DGVSAIATGDVDWEE--GYD 348 Query: 317 FSENGAESMHD 327 D Sbjct: 349 LRAQIPAVTLD 359 >gi|313497307|gb|ADR58673.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 1273 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 39/295 (13%), Positives = 102/295 (34%), Gaps = 19/295 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60 R +G+ L +V++ ++ + ++R D E +A +G + V G ++ H Sbjct: 15 RWGLGICALLAVLVALYVSLGRELVPLVAEYRADVESKAEQALGLPVHV-GALEGHWSGL 73 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSK 119 P + +D+++ + G+ +++ + + + L+ E+R+ + + L + + Sbjct: 74 APVLRVRDLQLGE---GTKALRLDDVMVVPDIWASLTAREVRLARIQLGGLQLILRENEQ 130 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 G + D + ++ GRI + D + D + + Sbjct: 131 GAWSLEGLPKKDDAPLDPADLLQRLRQLGRIDVFDSLVTLHPWQRD-----PLTLTYVSA 185 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKIT---ANFPAKNKAISLKIQLFPLAYPIIIDLF 235 L + + ++ T D + A + + ++ + + L + + Sbjct: 186 GLQAGAKRQALDLRATLP-DGQPLALSLNSRMSAEAWRDGEVEAYVSLPQSDWAHWLPPR 244 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 W+ G F + +L + RL G + ++ L Sbjct: 245 VLGQWHADTLRAGGEFWIGWGKGQLQRAVVRLNAPRLEGAY-AGRKAANLNNLAL 298 >gi|167031960|ref|YP_001667191.1| hypothetical protein PputGB1_0945 [Pseudomonas putida GB-1] gi|166858448|gb|ABY96855.1| conserved hypothetical protein [Pseudomonas putida GB-1] Length = 1271 Score = 63.4 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 97/285 (34%), Gaps = 24/285 (8%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60 R +G+ L +V++ ++ + ++R D ER+A +G + V G ++ Sbjct: 13 RWGLGVCALLAVLVALYVSLGRELVPLVAEYRADVERKAEQALGLPVHV-GALEGRWSGL 71 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSK 119 P + +D+++ + G+ +++ + + + L+ E+R+ + + L + + Sbjct: 72 APVLRVRDLQLGE---GATALRLDDVMVVPDVWASLTAREVRLARIQLGGLQLILRENEQ 128 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 GV + D + ++ GR+ + D S + L R ++ Sbjct: 129 GVWDLEGLPKKDDAPLDPADLLQRLRQLGRVDVFD---------SQVTLHPWQRDPLTLT 179 Query: 179 PLSIDSIKGSVIAEGTGNF---DNKRSAFKIT---ANFPAKNKAISLKIQLFPLAYPIII 232 +S G D + A + + ++ + + L + + Sbjct: 180 YVSAGLQAGPARQAVDLRATLPDGQPLALTLHSRMSAKAWRDGEVEAYLSLPQSDWSHWL 239 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 W G F V +L + L G + Sbjct: 240 PPSLLGQWQADTLRAGGEFWVDWGKGQLQQAVVRLNAPELQGAYA 284 >gi|313107062|ref|ZP_07793264.1| hypothetical protein PA39016_000850003 [Pseudomonas aeruginosa 39016] gi|310879766|gb|EFQ38360.1| hypothetical protein PA39016_000850003 [Pseudomonas aeruginosa 39016] Length = 1276 Score = 63.4 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 32/253 (12%), Positives = 80/253 (31%), Gaps = 16/253 (6%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 +R+ E +A +G + + + F P V ++I++ E ++ + + Sbjct: 43 YRQQLEGEAGKQLGMPVRIA-ELTGSWRGFEPLVVARNIQVGDGEQS---LRLARVRLAP 98 Query: 91 EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149 + L LL+ ++R+ + ++ L G + + L + ++ RI Sbjct: 99 DLLGSLLARQVRIGSLELEGLKLTLREGEDGQWSLDGLPHSDKPSDPRKLLQFLLQTQRI 158 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208 ++D + + +A L+ + S G + D + A Sbjct: 159 SLLDSQLEVAPR------GSAALSLSAVGATLRSSSVGGQSLDARLQLPDGQPLALHAEG 212 Query: 209 NFPAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 +++ + + L + + W + G F K L Sbjct: 213 RIDSEDWPRSSARFYLSLPQSDWAQWLPAGLTQEWTIVRAKAGGDFWFDWRDGKAQRLVA 272 Query: 266 SAKKSRLSGNFKI 278 +L ++ Sbjct: 273 RLLAPQLKASYAA 285 >gi|54294642|ref|YP_127057.1| hypothetical protein lpl1719 [Legionella pneumophila str. Lens] gi|53754474|emb|CAH15958.1| hypothetical protein lpl1719 [Legionella pneumophila str. Lens] Length = 1273 Score = 63.4 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 91/289 (31%), Gaps = 28/289 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHILP 60 L+++ + L L V V + W ++ + E+ T ++G+ + V+ Sbjct: 12 LKKIWMVLAVLIIVAAVFSSVFRALTPWAKQYKGEVEQHLTSLLGQPVTVQTMETGWYWF 71 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P V K IRI + + ++ L + L + I+ +YID HL + Sbjct: 72 EPVVKLKHIRI--HDGHNKSIYLDRLIVGVNLFKSLWNWRIQPGVLYIDDMHL-VFREKD 128 Query: 120 GVS-------------NWFQRKSTMDMIHNVILEKIHVKG--GRIKIIDQESDQVYFLSD 164 G + K+ + EK+ V+ + D + +++ Sbjct: 129 GHWRIEGISSNAMKDTDITPEKTREILDWLAQQEKLIVRHVSAHLHFND---GSLIPVNE 185 Query: 165 LNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 LNL I + N + + + + GN S + T + L Q Sbjct: 186 LNLSIVNKGGNYKIKGEAKLKQTNATVFQLLGNVQFDPSQIENTNGRFYFSAINVLPAQW 245 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 L + L G + S L L +L Sbjct: 246 QNLLPKSSMQLEGG----KGNVSLWVDLEKGNISSIQAELRLKRLAWKL 290 >gi|310823659|ref|YP_003956017.1| hypothetical protein STAUR_6433 [Stigmatella aurantiaca DW4/3-1] gi|309396731|gb|ADO74190.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 1302 Score = 63.4 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 31/281 (11%), Positives = 91/281 (32%), Gaps = 8/281 (2%) Query: 29 WTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSM 88 W RQ ++G + + G ++ L V + + + + + + Sbjct: 33 WDAACTLARRQLPELLGLDVGI-GQCELDPLGQ-RVILRGLSLFTPGTETPLFAADMAEV 90 Query: 89 RAEFLPLLSGEIRVFDMYIDQPHLNFYL-SSKGVSNWFQRKSTMDMIHNVILEKIHVKGG 147 R F+ LSG++ + + + +P + L S+ + + + + ++ + G Sbjct: 91 RLGFIRPLSGKLTLELVRVQRPRVVLDLSRPSAKSSQEPASCVLKPLGRLRISRLALTGA 150 Query: 148 RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207 ++++ + ++DL+++ R+ + K + EG G +R Sbjct: 151 QVRLA-LPGGRRVEVTDLDVEWKDRWGVAEFDVEAQRGKLWLGPEG-GEVPVRRLVLSGG 208 Query: 208 ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA 267 + ++ + + ++ + + + Q + + Sbjct: 209 LDVDSELVEFN-RAEVTLDEASVSLSGRVE-SLCDPQLALDAQVFLPLSTLSRTGVLPRP 266 Query: 268 KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308 L +S G ++ N + + T +S Sbjct: 267 ASGHLWSRLTVS-GAPAAPHVSMELSASNLAYERFGPTSLS 306 >gi|255002726|ref|ZP_05277690.1| hypothetical protein AmarPR_00115 [Anaplasma marginale str. Puerto Rico] Length = 898 Score = 63.4 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 110/365 (30%), Gaps = 37/365 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKK---IAVKGGIKIHIL 59 + L L VV VP +DW + E +Q G + G I+ +L Sbjct: 2 KFLGRLCCCVLVVFAALAFVPYLVDWNAHYGEYVFKQLGAATGSSGAVVKAIGNIEGSLL 61 Query: 60 PFPSVFFKDIRI---DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 P + +++ + + + I+ + + + L +L GE +V + + Sbjct: 62 -LPKLTVRNLYVECSEDAAGCAGTLSIDRMELSVDPLSILMGEPKVRTISLYG----LRT 116 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 S G+ ++ + H I + V GG + + V+ S I + + Sbjct: 117 SVGGLVGMVGSQTKSGLGHVRIFDSAVVTGGVVGASASAYNTVHVKS---ATIKSSGSAL 173 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP--LAYPIIIDL 234 + + S K+ + P + +S + ++ Sbjct: 174 FGDAVLKIGGTKYLLSSKLERSAAGSTVKVELHSPNTSMVLSGNGAGQGLFDDFGARFEV 233 Query: 235 FG-NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 NL + + + G + + LSA G+ + +QS Sbjct: 234 KTENLSELAQTVAVVTNYRLLGSVASAEEMVLSAGIKAAKGS------GFEVKDLTMQSK 287 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN---DDLKKDD 350 +++ S N + D F E ++ D + Sbjct: 288 S------ISGTLELACTYAPFCTTSLNFSSIDLD----ALFPEGLGTEQDAYYADFQSSA 337 Query: 351 IQYSV 355 ++SV Sbjct: 338 ERFSV 342 >gi|222474760|ref|YP_002563175.1| hypothetical protein AMF_021 [Anaplasma marginale str. Florida] gi|222418896|gb|ACM48919.1| Conserved hypothetical protein [Anaplasma marginale str. Florida] Length = 906 Score = 63.4 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 110/365 (30%), Gaps = 37/365 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKK---IAVKGGIKIHIL 59 + L L VV VP +DW + E +Q G + G I+ +L Sbjct: 10 KFLGRLCCCVLVVFAALAFVPYLVDWNAHYGEYVFKQLGAATGSSGAVVKAIGNIEGSLL 69 Query: 60 PFPSVFFKDIRI---DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 P + +++ + + + I+ + + + L +L GE +V + + Sbjct: 70 -LPKLTVRNLYVECSEDAAGCAGTLSIDRMELSVDPLSILMGEPKVRTISLYG----LRT 124 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 S G+ ++ + H I + V GG + + V+ S I + + Sbjct: 125 SVGGLVGMVGSQTKSGLGHVRIFDSAVVTGGVVGASASAYNTVHVKS---ATIKSSGSAL 181 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP--LAYPIIIDL 234 + + S K+ + P + +S + ++ Sbjct: 182 FGDAVLKIGGTKYLLSSKLERSAAGSTVKVELHSPNTSMVLSGNGAGQGLFDDFGARFEV 241 Query: 235 FG-NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 NL + + + G + + LSA G+ + +QS Sbjct: 242 KTENLSELAQTVAVVTNYRLLGSVASAEEMVLSAGIKAAKGS------GFEVKDLTMQSK 295 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN---DDLKKDD 350 +++ S N + D F E ++ D + Sbjct: 296 S------ISGTLELACTYAPFCTTSLNFSSIDLD----ALFPEGLGTEQDAYYADFQSSA 345 Query: 351 IQYSV 355 ++SV Sbjct: 346 ERFSV 350 >gi|56416390|ref|YP_153464.1| hypothetical protein AM025 [Anaplasma marginale str. St. Maries] gi|56387622|gb|AAV86209.1| hypothetical protein AM025 [Anaplasma marginale str. St. Maries] Length = 906 Score = 63.0 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 110/365 (30%), Gaps = 37/365 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKK---IAVKGGIKIHIL 59 + L L VV VP +DW + E +Q G + G I+ +L Sbjct: 10 KFLGRLCCCVLVVFAALAFVPYLVDWNAHYGEYVFKQLGAATGSSGAVVKAIGNIEGSLL 69 Query: 60 PFPSVFFKDIRI---DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 P + +++ + + + I+ + + + L +L GE +V + + Sbjct: 70 -LPKLTVRNLYVECSEDAAGCAGTLSIDRMELSVDPLSILMGEPKVRTISLYG----LRT 124 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 S G+ ++ + H I + V GG + + V+ S I + + Sbjct: 125 SVGGLVGMVGSQTKSGLGHVRIFDSAVVTGGVVGASASAYNTVHVKS---ATIKSSGSAL 181 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP--LAYPIIIDL 234 + + S K+ + P + +S + ++ Sbjct: 182 FGDAVLKIGGTKYLLSSKLERSAAGSTVKVELHSPNTSMVLSGNGAGQGLFDDFGARFEV 241 Query: 235 FG-NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 NL + + + G + + LSA G+ + +QS Sbjct: 242 KTENLSELAQTVAVVTNYRLLGSVASAEEMVLSAGIKAAKGS------GFEVKDLTMQSK 295 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN---DDLKKDD 350 +++ S N + D F E ++ D + Sbjct: 296 S------ISGTLELACTYAPFCTTSLNFSSIDLD----ALFPEGLGTEQDAYYADFQSSA 345 Query: 351 IQYSV 355 ++SV Sbjct: 346 ERFSV 350 >gi|116620232|ref|YP_822388.1| hypothetical protein Acid_1109 [Candidatus Solibacter usitatus Ellin6076] gi|116223394|gb|ABJ82103.1| conserved hypothetical protein [Candidatus Solibacter usitatus Ellin6076] Length = 526 Score = 63.0 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 32/278 (11%), Positives = 84/278 (30%), Gaps = 9/278 (3%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64 + I + S+ + + W RE G+++ + G P P Sbjct: 17 IWIWVTGGLSLSALAVVIIVFAAHWPFTREAVTAALESASGRQVQI-GTFAKTYFP-PGC 74 Query: 65 FFKDIRIDQ--KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 +R + +E LS+RA L + ++ + H+ + G + Sbjct: 75 TAGQVRFLRHKHPGAEPIISVEKLSIRATLTGLFGSPTHLSEVRVAGMHMIVAPNVTGEN 134 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 ++ + + KI G ++ I ++ + ++ + +++ + +P+ Sbjct: 135 RTTVLLNSGPGGKGLAISKITADGAVLEFIHEDRKEPPYVIRVE-RLAVTNVGFGTPMFF 193 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242 + + G + K + + +S + + G Sbjct: 194 RATVRNSEPPGVIRAEGKFGPWNPS---DIGATPVSGTYAYDDIDLSFFESILGKGRAWG 250 Query: 243 KQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKIS 279 + G +L+ S +L+ F + Sbjct: 251 QFSDSLSRIRTRGGVEVSGFHLDGSDHAVQLATTFDAT 288 >gi|294338555|emb|CAZ86884.1| conserved hypothetical protein [Thiomonas sp. 3As] Length = 1426 Score = 63.0 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 34/289 (11%), Positives = 74/289 (25%), Gaps = 27/289 (9%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWT--DFREDFERQATLIVGKKIAVKGGIKIHI-LPF 61 VL+ L F + G T+ + FR E+ ++ +G + + G I+ Sbjct: 19 VLLVLTVYFVLG-AGLLTLRYAVLPNAQQFRPWVEQVSSQALGLPVHI-GAIQTQWHGLM 76 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P D+RID + + + + L + I L Sbjct: 77 PQFALHDVRIDGPQG-QPALQFAAVEATPSWKSLTRLTPTFDQLVIRGADLTVTRPDANH 135 Query: 122 SNW-----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD----QVYFLSDLN 166 + ++I + R+ + + ++ L Sbjct: 136 LEIGGIRIALNSSGQSDAAQQFADWLFEQDEILILDSRLTWENAAQQAPPLPLTQVNLLL 195 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL---KIQL 223 ++ G + + + + TA+F + + L Sbjct: 196 RNTLLTHRAALTATPPAGFGGPIDLRASFR---QPFFLRHTADFSRWKGTLYGEASNVDL 252 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 L + + L A + +L L +L Sbjct: 253 AALQPQLPLTLPATTQTGRGSVRAWAQLDKAAPTAFTADLALRGVALQL 301 >gi|320330010|gb|EFW85997.1| hypothetical protein PsgRace4_10297 [Pseudomonas syringae pv. glycinea str. race 4] Length = 990 Score = 63.0 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 36/331 (10%), Positives = 91/331 (27%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R L V+V + FI +Q ++ ++ P+ Sbjct: 1 MSRGLKRTLGSLLTVIVLYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPY 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 58 TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRIELIKPKTELLFEKQG 115 Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168 N + + +++I + G + D Q LN + Sbjct: 116 KLNLAQLFKLPASEPAKDEPPGKPFPLRIDEIKLADGYVHFQDMRPSQPIEFLYDTLNFE 175 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 + + + G + G + S + P A Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L K S + + + ++ +S + Sbjct: 236 LPLALEDGVLNFSTAYTLNLAKETELKLTNVSASVAPFALNTPDGRPLVRLQRLDVSETS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + Q + ++ + D + Sbjct: 296 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 326 >gi|71907630|ref|YP_285217.1| hypothetical protein Daro_2001 [Dechloromonas aromatica RCB] gi|71847251|gb|AAZ46747.1| hypothetical protein Daro_2001 [Dechloromonas aromatica RCB] Length = 564 Score = 63.0 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 38/289 (13%), Positives = 87/289 (30%), Gaps = 23/289 (7%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLS 87 + F+ E + + + G + + + P P + +RI DG I + Sbjct: 187 PYERFKPALESSLAQYLQAPVKIDG-VGVALFPMPQLKLTGVRIGNPSDG----SIAEVR 241 Query: 88 MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGG 147 + + L S ++ + I L ++ V K + VI+ KI + Sbjct: 242 ISSPLSLLWSSPFQIPRIDITGAAL----AANRVVAMPLLKGGVTGNGIVIIRKIRIDHS 297 Query: 148 RIKIIDQESDQVYFLSDLNLQISA---------RFLNIISPLSIDSIKGSVIAEGTGNFD 198 + D ++N ++ S+ ++ EG + Sbjct: 298 QFIFTD-NLAMTDIYGEINFGADGVVEKATFETNDRGLLIDAQPSSLGIALNIEGRA-WK 355 Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LFWNEKQPIYSGVFSVAGDF 257 + + + + L G+ L +G +++ Sbjct: 356 PSGTTISFASLQAKGVLQKDRLLVQNIDTTFLGGLLKGDWLLDWSNGLAMAGDGTLSRID 415 Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 S+ L L ++ G+ S +R + +S+ NS + + Sbjct: 416 SRKLAATL-VPSLKIEGDMNGSV-RLRSTGRDWESLWANSEATLNTEIT 462 >gi|71733521|ref|YP_276304.1| hypothetical protein PSPPH_4182 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554074|gb|AAZ33285.1| Domain of Unknown Function (DUF748) family [Pseudomonas syringae pv. phaseolicola 1448A] Length = 1005 Score = 63.0 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 37/331 (11%), Positives = 92/331 (27%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R L V+V + FI +Q ++ ++ P+ Sbjct: 16 MSRGLKRTLGSLLTVIVLYSLLGFFILPGVALRITNQQLANYATVPAKLE---RLEFNPY 72 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + D+ I G + E L + L + + + + + +P +G Sbjct: 73 TLELTLWDLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRIELIKPKTELLFEKQG 130 Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168 N + + +++I + G + D Q LN + Sbjct: 131 KLNLAQLFKLPASEPAKDEPPGKPFPLRIDEIKLADGYVHFQDMRPSQPIEFLYDTLNFE 190 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 + + + G + G + S + P A Sbjct: 191 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 250 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L K S + + + ++ +S + Sbjct: 251 LPLALEDGVLNFSTAYTLNLAKETELKLTNVSASVAPFALNTPDGRPLVRLQRLDVSETS 310 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + Q + ++ + D + Sbjct: 311 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 341 >gi|330875171|gb|EGH09320.1| hypothetical protein Pgy4_07854 [Pseudomonas syringae pv. glycinea str. race 4] Length = 845 Score = 63.0 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 30/287 (10%), Positives = 87/287 (30%), Gaps = 28/287 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A+ +G +++ G ++ F Sbjct: 13 RWGLSLCALVLVLAALYVSLGRQLTPLVAEYRVDVETRASSALGMPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P D+ + + GS +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVFLAHDVMVGE---GSSAVRLDRVRVVPDLWESLLARQVRIAHLEVDGLQFMLRQDKE 128 Query: 120 GVSNWFQRKSTMDMIHNVI--------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 G + D + + + + ++ + L+ +NL ++ Sbjct: 129 GNWSVQGLPVRNDSPFDPGQVLEQMQMVSHLSLLDSQVTV-QPFDAAPLTLTYVNLSLAT 187 Query: 172 RFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + + G + K+ + L + Sbjct: 188 GSYHQRLDARLTLPDGQPFALNVRSRIQASQ----------WKDGEADVYASLPQSDWAK 237 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 + W + G ++ + + + G + Sbjct: 238 WLPKSLTREWTLSKLQAGGELWMSWGKGTVQSATARLNAPHVKGVYA 284 >gi|330958027|gb|EGH58287.1| hypothetical protein PMA4326_05546 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 1271 Score = 63.0 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 89/302 (29%), Gaps = 29/302 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + + L ++ ++ + ++R D E +A+ +G +++ G ++ F Sbjct: 13 RWGLSICALILILAALYVSLGRQLTPLVAEYRVDVESRASTALGMPLSI-GRLEGSWNRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P V D+ + + GS +++ + + + LL+ E+R+ + +D Sbjct: 72 SPVVLAHDVMVGE---GSSALRLDRVRVVPDLWASLLAREVRIDHLEVDGLQFILKQGED 128 Query: 120 GVSNWFQRKSTMDMIHNV--------ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 G D N + + + ++ + L+ +N+ ++ Sbjct: 129 GSWAVQGLPIRDDSPFNPEQVLNQMQRVAHLSLLDSQVTV-QPFDAAPLTLTYVNVSLTT 187 Query: 172 RFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + + G + R K + L + Sbjct: 188 GSYHQRLDARVTLPDGQPLALNMRSRVQASR----------WKEGEADVYASLPQSDWGK 237 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 + W G ++ L + ++ G + + L Sbjct: 238 WLPKSLTREWTLSTLQAGGEVWMSWGKGTLQSATARLNAPKIKGVYAARKPT-TVDNLAL 296 Query: 291 QS 292 + Sbjct: 297 NA 298 >gi|320322521|gb|EFW78614.1| hypothetical protein PsgB076_21372 [Pseudomonas syringae pv. glycinea str. B076] Length = 990 Score = 63.0 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 38/331 (11%), Positives = 89/331 (26%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R L V+V + FI +Q ++ ++ P+ Sbjct: 1 MSRGLKRTLGSLLTVIVLYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPY 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 58 TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRIELIKPKTELLFEKQG 115 Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168 N + + +++I + G + D Q LN + Sbjct: 116 KLNLAQLFKLPASEPAKDEPPGKPFPLRIDEIKLADGYVHFQDMRPSQPIEFLYDTLNFE 175 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAIS----- 218 + + + G + G + S + Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 235 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS---GN 275 L + L NL + + + SVA + A+ RL + Sbjct: 236 LPLALEDGVLNFSTAYTLNLAKETELKLTNVSASVAPFALNTPDGRPLARLQRLDVSETS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + Q + ++ + D + Sbjct: 296 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 326 >gi|304409792|ref|ZP_07391412.1| hypothetical protein Sbal183DRAFT_1248 [Shewanella baltica OS183] gi|307304149|ref|ZP_07583902.1| hypothetical protein Sbal175DRAFT_1961 [Shewanella baltica BA175] gi|304352310|gb|EFM16708.1| hypothetical protein Sbal183DRAFT_1248 [Shewanella baltica OS183] gi|306913047|gb|EFN43470.1| hypothetical protein Sbal175DRAFT_1961 [Shewanella baltica BA175] Length = 1156 Score = 63.0 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 47/380 (12%), Positives = 114/380 (30%), Gaps = 53/380 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR ++ S V +P I + + ++G+ + + G I+I+ Sbjct: 19 LRVLVYLTAVYLSYVCTLGLILPYAITT-----LAPEKLSALLGRPVTL-GDIRINPF-N 71 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL-SSK 119 V + I +K+ + + + F + + + +++I P+ + K Sbjct: 72 FKVAIDQLAIKEKD-EKPFAGLAQVQFEVNFWQSVFNRAAVIENIHIQAPYAHIIRVEKK 130 Query: 120 GVSNW-----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 G + + + V+L + + G+ D+ + Sbjct: 131 GKAGFNFDDILQTLNEHSSASTETTPAETSAPVRVLLSQFVLDAGQFNFDDKITHAQVNY 190 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 ++NL++S + + ++ SV N ++ + + + IQ Sbjct: 191 PNINLKLSQLD----TEYLMSALSASVAPATKANKTEANPTPNAQSSSDTGSGSQVMPIQ 246 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 A + D G + G F + ++ K +L+ ++ D Sbjct: 247 HNHYAIQLSDDHAGEIS-------LQGQFQLFPLKVAG---DVHIAKLKLTPLWRFIDDQ 296 Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE-----SMHDLNETDFFEEE 337 + L + + +V E L + N + + E + Sbjct: 297 -------FKPALTDGEITAKTQYQVDFAENGELQVTSNNGQFIVEKLNFNDQERSVVKLP 349 Query: 338 EKKNKNDDLKKDDIQYSVNK 357 + Q +NK Sbjct: 350 IFALDGISMDLKQQQVHINK 369 >gi|146302053|ref|YP_001196644.1| AsmA family protein [Flavobacterium johnsoniae UW101] gi|146156471|gb|ABQ07325.1| AsmA family protein [Flavobacterium johnsoniae UW101] Length = 939 Score = 63.0 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 47/385 (12%), Positives = 116/385 (30%), Gaps = 35/385 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI---LP 60 ++L G + + ++ + + + ++ A + K+ K+ P Sbjct: 11 KILKWTGIVIA-GILLLLFLIPLLFPGKVASEVKKIANERLDTKLEFS-KSKLSFFTHFP 68 Query: 61 FPSVFFKDIRIDQ--KEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLS 117 +V DI + K + ++ + E+++ +Y+ +N ++ Sbjct: 69 SLTVSLDDISMTGSKPFGNDTLLKADQVAFGINLKRLIFDSEVKINKLYVSNALINVMVN 128 Query: 118 SKGVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 KG +N+ + + + + LE+I ++ +K D+ + + Sbjct: 129 EKGQANYNIYVAPEDRKNEKEDPNAPEEGTAIKLERIDLENCHVKYNDRSAKVLVDAKGF 188 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 N + I L+ D+ ++ ++ A + A+S +Q Sbjct: 189 NYIGKGNLSDDIFDLNTDAKIDTLDFYYNRTAYLRKKAVRADLITRINTHALSFILQKNE 248 Query: 226 LA-YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 L + + G + + K L LS + Sbjct: 249 LQINKLPLKFTGLFTILRDGYKINIKAASENTTVKDL---LSVMPP----------EYLT 295 Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344 S + VS+ ++ L F+ + + + + N Sbjct: 296 WLEKTEISGKSDLVLSFKGDYNVSKKQKPNLAFNLKIKDGAVSYQNAPVPLTDFQMDLNA 355 Query: 345 DL-KKDDIQYSVNKKEEKDNSHDKE 368 L D Q VN + + +K+ Sbjct: 356 MLPSLDTEQLLVNLRTLRFKVGEKD 380 >gi|104780295|ref|YP_606793.1| hypothetical protein PSEEN1079 [Pseudomonas entomophila L48] gi|95109282|emb|CAK13979.1| conserved hypothetical protein [Pseudomonas entomophila L48] Length = 1270 Score = 63.0 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 37/300 (12%), Positives = 94/300 (31%), Gaps = 25/300 (8%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60 R +G+ L +V++ ++ + ++R D E +A +G + V G ++ Sbjct: 13 RWGLGICALLAVLVALYVSLGRQLVPLVAEYRVDAELKAEQALGMPVHV-GALEGRWSGL 71 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSK 119 P + +D+++ + +++ + + + L E+R+ + + L L Sbjct: 72 APVLRVRDLQLGEGAAS---LRLDDVKLVPDLWASLKAREVRLARIQLAG--LQLILRED 126 Query: 120 GVSNWFQR--KSTMDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSDLNLQISARFLNI 176 G +W D + ++ GRI + D + L+ Sbjct: 127 GQGSWALEGLPHKDDAPFDPADALKRLRQLGRIDLFDSQVT-------LHPWQRDPLTLT 179 Query: 177 ISPLSIDSIKGSVIAEGTGNF-DNKRSAFKI---TANFPAKNKAISLKIQLFPLAYPIII 232 L + + + D + A + + + + + L + + Sbjct: 180 YVSLGLQAGASRQRLDLRATLPDGQPLAMSLDSRASARAWREGRLQAYLSLPQSDWARWL 239 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 W G F + + +L + +L G + + L + Sbjct: 240 PPRLLGQWQASTLRAGGEFWIDWNKGQLQQAMVRLNAPQLKGAY-AERKAATLDNLALSA 298 >gi|116619874|ref|YP_822030.1| hypothetical protein Acid_0746 [Candidatus Solibacter usitatus Ellin6076] gi|116223036|gb|ABJ81745.1| protein of unknown function DUF490 [Candidatus Solibacter usitatus Ellin6076] Length = 1364 Score = 63.0 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 24/250 (9%), Positives = 64/250 (25%), Gaps = 20/250 (8%) Query: 17 LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKG-GIKIHILPFPSVFFKDIRI--DQ 73 +V F D R G ++ ++ + +D I + Sbjct: 26 IVFVLQSSWFFD--KVRAKIVSSVETATGGRVEIRSFRMDWR---HMRAEVRDFVIHGTE 80 Query: 74 KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM-- 131 +++ + L +L + + + + P + ++ G +N K Sbjct: 81 PAGKPPLFHASSVAVGLKLLTILKPSVDIRYLNVADPQVYLIIAPDGSTNIPAPKLKSTA 140 Query: 132 -----DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186 + I + + ++ G ++ S + NL ++ + Sbjct: 141 KTSTVEDILKLAIGTFTLERGSFEVE-ARSRTPFDARGENLNLNLAYDRAGPRYRGTLAI 199 Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 + D F + + I++ + G + P Sbjct: 200 QPLHLSYD---DYGPVPFDVRLGLTLERNRIAVD-TGRLATSATQVTFSGAVEDLAAAPR 255 Query: 247 YSGVFSVAGD 256 S + Sbjct: 256 GSFRYEARAA 265 >gi|330981099|gb|EGH79202.1| hypothetical protein PSYAP_21407 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 994 Score = 63.0 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 38/331 (11%), Positives = 95/331 (28%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R L V+ + FI +Q ++ ++ PF Sbjct: 1 MSRGLKRTLGSLLAVIALYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPF 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 58 TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRVELIKPRTELLFDKQG 115 Query: 121 VSNWFQRKSTMDM----------IHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166 N Q + +++I + GG + D Q D Sbjct: 116 KLNLAQLFKLPASEPAKDEPATKPFPLRIDEIKLAGGYVHFQDLRPSQPIEFLYDALDFE 175 Query: 167 LQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 L+ + + +++ + G + G + S + P A Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPIASEGTLKVTDSKMKLWWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L + K S + + + ++ +S + Sbjct: 236 LPLALEDGVLNFSTAYTLNLSKETELKLTNVSASVAPFVLNAPDGRPLVRLQRLDVSETS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + Q + ++ + D + Sbjct: 296 VDLAKQLVTVGKVRSQKLETWAAREADGQLD 326 >gi|289676562|ref|ZP_06497452.1| hypothetical protein PsyrpsF_25004 [Pseudomonas syringae pv. syringae FF5] Length = 355 Score = 63.0 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 33/337 (9%), Positives = 97/337 (28%), Gaps = 24/337 (7%) Query: 2 LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++R L L L +++ +P + R+ + + + + + + Sbjct: 1 MKRRYSWPLWTLAALIVLLVAVNIALPYLV-----RDYLNDKLADMGDYRGEIT-DVDLA 54 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + + K ++I + + + + + L V P +NF Sbjct: 55 LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTGPQINFV 113 Query: 116 LSSKGVSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 + + + + + L ++ + GRI + S + + S Sbjct: 114 DGGSKQDSQTGQGTDWRTQMNKLLPITLNELRIDDGRITFNNFNSTPKVKIEADQVNASI 173 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230 L + + + +G + + + K++ + Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESSARFDPFSNFEDFDFKLRATGIQLKK 230 Query: 231 IIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 + D ++ V D +L ++ N++ N ++ Sbjct: 231 LNDFSSAYGKFDFNAGDGDVVIEAQADKGQLKGYIKPLLRNVDVFNWQQDVENKDKGVFR 290 Query: 290 --LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 ++++ S T N+ + L+ S + + Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327 >gi|330862857|emb|CBX72998.1| uncharacterized protein yhdP [Yersinia enterocolitica W22703] Length = 916 Score = 62.6 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 105/313 (33%), Gaps = 23/313 (7%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66 + + ++++ G + I D+R + I G + V G ++ F P++ Sbjct: 7 TIIVVVALLVSGLRMMLPLI--NDYRPQIVAKIQSISGIPLEV-GFMQGTWETFGPTLEL 63 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSN-- 123 +DIR + +++ +++ + LL + DM Q L+ + + + Sbjct: 64 RDIRAKLPKAD---WQVQRVTLALDVWQSLLHRRWQFRDMTFYQLQLDLHTTLDRQQSNG 120 Query: 124 WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSI 182 ST+ I L+ ++ RI + + + L S+ +S+ Sbjct: 121 NSFEASTITDIFLRQLDHFDLRNSRISFLTPSGPRAELEIPQLTWLNSSSRHRAEGQISL 180 Query: 183 DSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +I G + + + + ++ +Q + I + + Sbjct: 181 STINGQHGVLMVRMDLHDNQGILS----------NGTVYMQADNIDVKPWISRWLHTNTG 230 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 + +S ++ ++ + + ++ + + + + + L+ + Sbjct: 231 LESAEFSLAAWLSIKSGEIYSGNVLLRQGQANWTVEGESHQLAVDNLVLEGSRHGNGWQI 290 Query: 302 DN-KTKVSQDEEN 313 D + + D + Sbjct: 291 DAPELSLKTDGQP 303 >gi|146281407|ref|YP_001171560.1| hypothetical protein PST_1021 [Pseudomonas stutzeri A1501] gi|145569612|gb|ABP78718.1| predicted membrane protein [Pseudomonas stutzeri A1501] Length = 1266 Score = 62.6 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 29/284 (10%), Positives = 82/284 (28%), Gaps = 20/284 (7%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60 R++ F + + + ++R + + + + + + G ++ Sbjct: 13 RQLFWVAAFGLILAALYVSLGRQLVPLVAEYRTELQERVRTALDMPVTL-GRLEGRWEGL 71 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + D+ + + + +++ +++ + L + R+ + H++ Sbjct: 72 APRLLAHDVLLGEGDS---AMRLDRIAVVPDLAGSLWARSWRLSSLEFSGVHVSVLEGED 128 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL--QISARFLNII 177 G D +KI ++ + S + L + Sbjct: 129 GKWQVKGLPERDDAPP-PDPQKI------LEALQHIRGLALLDSQITLEPFGDSPLTLSY 181 Query: 178 SPLSIDSIKGSVIAEGTGNF-DNKRSAFKITANFP---AKNKAISLKIQLFPLAYPIIID 233 + LS+ + + +G D + A ++ A L + L + + Sbjct: 182 TDLSLRTDGNRLRLDGRSVLPDGQPLALRLNARVQPQRWAQAEAQLYLSLPQSDWAAWLP 241 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 W + G + +L L RL + Sbjct: 242 GRLTGAWQLQTAQLGGELWLRWKAQQLERAVLRLNAPRLRAAYA 285 >gi|153000201|ref|YP_001365882.1| hypothetical protein Shew185_1674 [Shewanella baltica OS185] gi|151364819|gb|ABS07819.1| protein of unknown function DUF748 [Shewanella baltica OS185] Length = 1154 Score = 62.6 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 45/384 (11%), Positives = 109/384 (28%), Gaps = 63/384 (16%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR + S V +P I + + ++G+ + + G I+I+ Sbjct: 19 LRVLAYLTAVYLSYVCTLGLILPYAITT-----LAPEKLSALLGRPVTL-GDIRINPF-N 71 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL-SSK 119 V + I +K+ + + + F + + + + +++I P+ + K Sbjct: 72 FKVEIDQLAIKEKD-EKPFAGLAQVQFEVNFWQSVFNRAVVIENIHIQAPYAHIIRVEKK 130 Query: 120 GVSNW-----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 G + + + V+L + + G+ D+ + Sbjct: 131 GKAGFNFDDILQTLNEHSSASTETTPAEASAPVRVLLSQFVLDAGQFNFDDKITHAQVNY 190 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 ++NL++S + S+ + A K + Sbjct: 191 PNINLKLSQLDTEYLMSALSASVAPATKAN---------------------------KTE 223 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 P G+ + Y+ S L + +++G+ I+ Sbjct: 224 ANPTPNAQSTSDTGSQVMPVQHNHYAIQLSDNHAGEISLQGQFQLFPLKVAGDVHIAKLK 283 Query: 283 V----RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE-----SMHDLNETDF 333 + R + + L + + +V E L + N + + E Sbjct: 284 LPPLWRFIDDQFKPALTDGEITAKTQYQVDLAENGELQVTSNNGQFIVEKLNFNDQERSV 343 Query: 334 FEEEEKKNKNDDLKKDDIQYSVNK 357 + + Q +NK Sbjct: 344 VKLPIFALDGITMDLKQQQVRINK 367 >gi|320327773|gb|EFW83781.1| hypothetical protein PsgRace4_23330 [Pseudomonas syringae pv. glycinea str. race 4] gi|330877550|gb|EGH11699.1| hypothetical protein Pgy4_11262 [Pseudomonas syringae pv. glycinea str. race 4] Length = 355 Score = 62.6 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 33/337 (9%), Positives = 96/337 (28%), Gaps = 24/337 (7%) Query: 2 LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++R L L L +++ +P + R+ + + + + + + Sbjct: 1 MKRRYSWPLWTLAALVVLLIAVNIALPYLV-----RDYLNDKLADMGDYRGEIT-DVDLA 54 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + + K ++I + + + + + L V P +NF Sbjct: 55 LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTGPQINFV 113 Query: 116 LSSKGVSNWFQRKSTM----DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 ++ + + D + + L ++ + GRI + S + + S Sbjct: 114 DGGSKQNSQTGQGTDWRTQMDKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQVNASI 173 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230 L + + + +G + + + K++ + Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESSARFDPFSNFEDFDFKLRATGIQLKK 230 Query: 231 IIDLF---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 + D G +N L + + + + + + R Sbjct: 231 LNDFSSAYGKFDFNAGDGDLVIEAQADKGQLSGYIKPLLRNVDVFNWHQDVENKDKGVFR 290 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 ++++ S T N+ + L+ S + + Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327 >gi|301063818|ref|ZP_07204311.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300442080|gb|EFK06352.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 593 Score = 62.6 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 38/323 (11%), Positives = 95/323 (29%), Gaps = 27/323 (8%) Query: 21 FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFE 80 + I F+ Q + G ++ I + ++ ++ R+ Sbjct: 25 ILLNFLIHTEPFQRYLLEQLSQATGYELR-AKKISLSFADGIAIRARNFRVYAPSGDEK- 82 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS------KGVSNWFQRKSTM--D 132 + + M LL G I ++ I +P + +G ++ Sbjct: 83 AGASRIRMDFSLRDLLRGRILPKNLAIIEPEIYLTAGKERGLSVQGKGPLLEKSYARLLA 142 Query: 133 MIHNVILEK--IHVKGGRIKIIDQ-----ESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 V LE + ++ + D + + + L +A + +P S + Sbjct: 143 AFPLVSLENAIVTMEPSGFTLKDLNVRLVRKSKEPVVLNGTLYGTAIYQGTTAPFSASGL 202 Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 G + D + S ++ + +S+K + I L G L + Sbjct: 203 LMEDPENG-LSIDGRCSIREMLLTRLLLPEELSIKNGTVGINAAIKGSLDGILSIDGSLL 261 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 F + D + ++ D ++I +++Q N + + + Sbjct: 262 FRDLNF-LLIDDGDKKAFSFKQLAVPFNASYA--DAVLKIPSFQVQ----NKAFTLNCTS 314 Query: 306 KVSQDE--ENLLNFSENGAESMH 326 ++ + + L+ Sbjct: 315 TINFTKPHDPHLDLKVKSPFMTL 337 >gi|307610454|emb|CBX00025.1| hypothetical protein LPW_17811 [Legionella pneumophila 130b] Length = 754 Score = 62.6 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 89/288 (30%), Gaps = 28/288 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++ + L L V V + W ++ + E+ T ++G+ + V+ Sbjct: 13 KKIWMVLAVLIIVAAVFSSVFRALTPWAKQYKGEVEQHLTSLLGQPVTVQTMETGWYWFE 72 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG 120 P V K IRI + + ++ L + L + I+ +YID HL + G Sbjct: 73 PVVKLKHIRI--HDGHNKSIYLDRLIVGVNLFKSLWNWRIQPGVLYIDDMHL-VFREKDG 129 Query: 121 VS-------------NWFQRKSTMDMIHNVILEKIHVKG--GRIKIIDQESDQVYFLSDL 165 + K+ + EK+ V+ + D + +++L Sbjct: 130 HWCIEGISRNAMKDTDITPEKTREILDWLAQQEKLIVRHVSAHLHFND---GSLIPVNEL 186 Query: 166 NLQISARFLNIISPLSID-SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 NL I + N + + + GN S K T + L Q Sbjct: 187 NLSIVNKGGNYKIKGEARLEQTNATVFQLLGNVQFDPSQIKNTNGRFYFSAINVLPAQWQ 246 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 L + L G + S L L +L Sbjct: 247 NLLPKSSMQLEGG----KGNVSLWVDLEKGNISSIQAELRLKRLAWKL 290 >gi|332531150|ref|ZP_08407063.1| hypothetical protein HGR_14359 [Hylemonella gracilis ATCC 19624] gi|332039257|gb|EGI75670.1| hypothetical protein HGR_14359 [Hylemonella gracilis ATCC 19624] Length = 1508 Score = 62.6 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 108/356 (30%), Gaps = 64/356 (17%) Query: 18 VGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI----HILPFPSVFFKDIRI 71 + FI R E QAT ++G+ + + G I+ +LP S +D+ + Sbjct: 39 AVWAGLNFFIVPRIDSLRPMLELQATQMLGRPLRI-GSIRAETDGRLLP--SFELRDVML 95 Query: 72 DQKE-----------------DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 + + ++ + ++ LL + + IDQP L Sbjct: 96 YEGAETPVPGATADGGDRGDVSAAPVLRLPRVHVQLSLHALLR--LGFDQLVIDQPDLTV 153 Query: 115 YLSSKGVSNWFQRKSTMDMI-------HNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166 ++ G + + + + GG ++ ID+ L L Sbjct: 154 RRAADGRIYIAGIEVPQQSGGDGRLADWVLSQTEWRITGGSVRWIDETRPVPPVALQGLE 213 Query: 167 LQISARFLNIISPLSIDS---IKGSVIAEGTGN---FDNKRSAFKITANFPAKNKA-ISL 219 ++ L + + + G V G F + S +++ + L Sbjct: 214 FRLRNGARTHEWRLDVQAPDELGGRVSLRGQLREPLFFARPSEWQLWDGELYAELERVDL 273 Query: 220 KIQLFPLAYPIIID----------LFGNLFWNEK-QPIYSGVFSVAGDFSKLLNLELSAK 268 +A+P + L + E + ++ G KL + Sbjct: 274 DALKQRIAWPTALTQVHLEGGSTALRAWVDVEEGHISSVTADVALGGVLLKLGPDLPALD 333 Query: 269 KSRLSGNF----------KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314 +RL+G F + DG+ +S L+ + +VS E Sbjct: 334 VNRLAGRFGARWGTRMGGSLQDGSYEVSTEGLRFDTRDGLVWSSGDARVSLAEYRP 389 >gi|330950298|gb|EGH50558.1| hypothetical protein PSYCIT7_02612 [Pseudomonas syringae Cit 7] Length = 354 Score = 62.6 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 38/331 (11%), Positives = 95/331 (28%), Gaps = 31/331 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R L V+ + FI +Q ++ ++ PF Sbjct: 1 MSRGLKRTLGSLLAVIALYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPF 57 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + I G + E L + L + + + + + +P +G Sbjct: 58 TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRVELIKPRTELLFDKQG 115 Query: 121 VSNWFQRKSTMDM----------IHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166 N Q + +++I + GG + D Q D Sbjct: 116 KLNLAQLFKLPASEPTKDEPATKPFPLRIDEIKLAGGYVHFQDLRPSQPIEFLYDALDFE 175 Query: 167 LQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216 L+ + + +++ + G + G + S + P A Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 235 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275 + L ++ L + L + K S + + + ++ +S + Sbjct: 236 LPLALEDGVLNFSTAYTLNLSKKTELKLTNVSASIAPFALNAPDGRPLVRLQRLDVSETS 295 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++ V + + + Q + ++ + D + Sbjct: 296 VDLAKQLVTVGKVRSQKLETWAARETDGQLD 326 >gi|229496696|ref|ZP_04390410.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC 35406] gi|229316593|gb|EEN82512.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC 35406] Length = 1634 Score = 62.6 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 43/345 (12%), Positives = 103/345 (29%), Gaps = 39/345 (11%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDF---ERQATLIVGKKIAVKGGIKIHILPFPS 63 + + L + + + L R E+Q G + + G + + + Sbjct: 41 VVVALLLAPFALIFLLISLLYLPPVQRGIARFAEQQVKKKTGIDLTI-GDLGLRF--PLT 97 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 + +DIR E + L PL +G+I + + S++ + Sbjct: 98 LSLRDIRAISPEG-DTLVALSRLDTDIPLFPLFNGQIETPRLQAEGVSFCIPDSARTMII 156 Query: 124 WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE----------------SDQVYFLSDLNL 167 + V L + V G + + D + ++L Sbjct: 157 GGGAQHLEIAAVAVNLSQQTVDAGALLLKDGGFSLYSVDTIKNPNPTPVKWKIAIDRIDL 216 Query: 168 QISARFLNIISP-LSIDSIKGSVIAEG------TGNFDNKRSAFKITANFPAKNKAISLK 220 Q + L + L + + EG + R + + + A++ + Sbjct: 217 QRAKVDLTMPFDSLYVRADIDKGTMEGFSYDIEALRLEANRVSLRAKSGSYARDARLPST 276 Query: 221 IQLF-PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 + + +++ G + +A L A+ + +SG+F + Sbjct: 277 PYVDYTHLFGYDMEVDGT------NLVQQKTLLMAEVSHLSLREHSGARINDVSGSFFMQ 330 Query: 280 DGNVRISRYKLQS--ILPNSSTDEDNKTKVSQDEENLLNFSENGA 322 DG + + +L + + S +++D +L Sbjct: 331 DGLIELEEMQLTTPYSRADGSLRIPLSIFIAKDTTAILRADLRAQ 375 >gi|322436234|ref|YP_004218446.1| protein of unknown function DUF490 [Acidobacterium sp. MP5ACTX9] gi|321163961|gb|ADW69666.1| protein of unknown function DUF490 [Acidobacterium sp. MP5ACTX9] Length = 1496 Score = 62.6 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 31/253 (12%), Positives = 73/253 (28%), Gaps = 17/253 (6%) Query: 35 DFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI--DQKEDGSFESKIEGLSMRAEF 92 + G ++ + G I ++ ++ + I + + + + +R + Sbjct: 65 EVVSVLEDSTGGRVDL-GRITFNLW-QLAIEADGLVIHGLEGPGEAPYLSADKILVRVKI 122 Query: 93 LPLLSGE--------IRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV 144 L + + + I+QPH++ + G +N K T VI + + Sbjct: 123 FDFLKRTTGTGKRTYVGLNLLRIEQPHVHLIIDKDGKTNQPVPKHTTPSNEPVIDTLLDL 182 Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204 K ++++++ + NL + S D ++ K Sbjct: 183 KAQKVELVNGLAALNDKAIPFNLAAKDLQAEVHYIASSDRYGATIDLNDLVTEMQKEPEA 242 Query: 205 KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW-----NEKQPIYSGVFSVAGDFSK 259 + + A+ + ++ F DL E G + Sbjct: 243 QSKLHLVAEIGRDAADLKEFSFHTGATSDLTATASLKNFSSPEWSTKLDGSLELKQIQVL 302 Query: 260 LLNLELSAKKSRL 272 L A L Sbjct: 303 SGVDGLDAGSVEL 315 >gi|52841982|ref|YP_095781.1| transmembrane protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|296107346|ref|YP_003619046.1| transmembrane protein [Legionella pneumophila 2300/99 Alcoy] gi|52629093|gb|AAU27834.1| transmembrane protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|295649247|gb|ADG25094.1| transmembrane protein [Legionella pneumophila 2300/99 Alcoy] Length = 1273 Score = 62.6 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 89/288 (30%), Gaps = 28/288 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++ + L L V V + W ++ + E+ T ++G+ + V+ Sbjct: 13 KKIWMVLAVLIIVAAVFSSVFRALTPWAKQYKGEVEQHLTSLLGQPVTVQTMETGWYWFE 72 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG 120 P V K IRI + + ++ L + L + I+ +YID HL + G Sbjct: 73 PVVKLKHIRI--HDGHNKSIYLDRLIVGVNLFKSLWNWRIQPGVLYIDDMHL-VFREKDG 129 Query: 121 VS-------------NWFQRKSTMDMIHNVILEKIHVKG--GRIKIIDQESDQVYFLSDL 165 + K+ + EK+ V+ + D + +++L Sbjct: 130 HWCIEGISRNAMKDTDITPEKTREILDWLAQQEKLIVRHVSAHLHFND---GSLIPVNEL 186 Query: 166 NLQISARFLNIISPLSID-SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 NL I + N + + + GN S K T + L Q Sbjct: 187 NLSIVNKGGNYKIKGEARLEQTNATVFQLLGNVQFDPSQIKNTNGRFYFSAINVLPAQWQ 246 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 L + L G + S L L +L Sbjct: 247 NLLPKSSMQLEGG----KGNVSLWVDLEKGNISSIQAELRLKRLAWKL 290 >gi|148359299|ref|YP_001250506.1| transmembrane protein [Legionella pneumophila str. Corby] gi|148281072|gb|ABQ55160.1| transmembrane protein [Legionella pneumophila str. Corby] Length = 1273 Score = 62.6 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 89/288 (30%), Gaps = 28/288 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++ + L L V V + W ++ + E+ T ++G+ + V+ Sbjct: 13 KKIWMVLAVLIIVAAVFSSVFRALTPWAKQYKGEVEQHLTSLLGQPVTVQTMETGWYWFE 72 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG 120 P V K IRI + + ++ L + L + I+ +YID HL + G Sbjct: 73 PVVKLKHIRI--HDGHNKSIYLDRLIVGVNLFKSLWNWRIQPGVLYIDDMHL-VFREKDG 129 Query: 121 VS-------------NWFQRKSTMDMIHNVILEKIHVKG--GRIKIIDQESDQVYFLSDL 165 + K+ + EK+ V+ + D + +++L Sbjct: 130 HWCIEGISRNTMKDTDITPEKTREILDWLAQQEKLIVRHVSAHLHFND---GSLIPVNEL 186 Query: 166 NLQISARFLNIISPLSID-SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 NL I + N + + + GN S K T + L Q Sbjct: 187 NLSIVNKGGNYKIKGEARLEQTNATVFQLLGNVQFDPSQIKNTNGRFYFSAINVLPAQWQ 246 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 L + L G + S L L +L Sbjct: 247 NLLPKSSMQLEGG----KGNVSLWVDLEKGNISSIQAELRLKRLAWKL 290 >gi|123443981|ref|YP_001007951.1| hypothetical protein YE3800 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090942|emb|CAL13824.1| putative exported protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 1291 Score = 62.6 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 40/321 (12%), Positives = 105/321 (32%), Gaps = 23/321 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59 L R++ G VV+ + + D+R + I G + V G ++ Sbjct: 4 LPRIMFATGATIIVVVALLVSGLRMMLPLINDYRPQIVAKIQSISGIPLEV-GFMQGTWE 62 Query: 60 PF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS 117 F P++ +DI + +++ +++ + LL + DM Q L+ + + Sbjct: 63 TFGPTLELRDISAKLPKAD---WQVQRVTLALDVWQSLLHRRWQFRDMTFYQLQLDLHTT 119 Query: 118 SKGVSN--WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFL 174 N ST+ I L+ ++ RI + + + L SA Sbjct: 120 LDRQQNNSNSFEASTITDIFLRQLDHFDLRNSRISFLTPSGPRAELEIPQLTWLNSASRH 179 Query: 175 NIISPLSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 +S+ +I G + + + + ++ +Q + I Sbjct: 180 RAEGQISLSTINGQHGVLMVRMDLHDNQGILS----------NGTVYMQADNIDVKPWIS 229 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 + + + +S ++ ++ + + ++ + + + + + L+ Sbjct: 230 RWLHTNTGLESAEFSLAAWLSIKSGEIYSGNVLLRQGQANWTVEGESHQLAVDNLVLEGS 289 Query: 294 LPNSSTDEDN-KTKVSQDEEN 313 + D + + D + Sbjct: 290 RHGNGWQIDAPQLSLKTDGQP 310 >gi|307555331|gb|ADN48106.1| conserved membrane protein [Escherichia coli ABU 83972] Length = 1266 Score = 62.6 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|26249826|ref|NP_755866.1| hypothetical protein c4000 [Escherichia coli CFT073] gi|26110254|gb|AAN82440.1|AE016767_200 Hypothetical protein yhdP [Escherichia coli CFT073] Length = 1266 Score = 62.6 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|327479585|gb|AEA82895.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 1266 Score = 62.6 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 33/299 (11%), Positives = 87/299 (29%), Gaps = 21/299 (7%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60 R++ F + + + ++R + + + + + V G ++ Sbjct: 13 RQLFWVAAFGLILAALYVSLGRQLVPLVAEYRTELQERVRTALDMPVTV-GRLEGRWEGL 71 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + D+ + + + +++ +++ + L + R+ + HL+ Sbjct: 72 APRLLAHDVLLGEGDS---AMRLDRIAVVPDLAGSLWARSWRLSSLEFSGVHLSVLEGED 128 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL--QISARFLNII 177 G D +KI +K + S + L + Sbjct: 129 GKWQVKGLPERDDATP-PDPQKI------LKALQHIRGLALLDSQITLEPFGDSPLTLSY 181 Query: 178 SPLSIDSIKGSVIAEGTGNF-DNKRSAFKITANFP---AKNKAISLKIQLFPLAYPIIID 233 + LS+ + + +G D + A ++ A L + L + + Sbjct: 182 TDLSLRTDGNRLRLDGRSVLPDGQPLALRLNARVQPQRWAQAEAQLYLSLPQSDWAAWLP 241 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 W + G + +L L RL + V++ + + Sbjct: 242 GRLTGAWQLQTAQLGGELWLRWKAQQLERAVLRLNAPRLRAAYT-EHSPVQLEDLAVDA 299 >gi|255003859|ref|ZP_05278660.1| hypothetical protein AmarV_00110 [Anaplasma marginale str. Virginia] Length = 906 Score = 62.6 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 51/365 (13%), Positives = 110/365 (30%), Gaps = 37/365 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKK---IAVKGGIKIHIL 59 + L L VV VP +DW + E +Q G + G I+ +L Sbjct: 10 KFLGRLCCCVLVVFAALAFVPYLVDWNAHYGEYVFKQLGAATGSSGAVVKAIGNIEGSLL 69 Query: 60 PFPSVFFKDIRI---DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 P + +++ + + + I+ + + + L +L GE +V + + Sbjct: 70 -LPKLTVRNLYVECSEDAAGCAGTLSIDRMELSVDPLSILMGEPKVRTISLYG----LRT 124 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 S G+ ++ + H I + V GG + + V+ S I + + Sbjct: 125 SVGGLVGMVGSQTKSGLGHVRIFDSAVVTGGVVGASASAYNTVHVKS---ATIKSSGSAL 181 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP--LAYPIIIDL 234 + + S K+ + P + +S + ++ Sbjct: 182 FGDAVLKIGGTKYLLSSKLERSAAGSTVKVELHSPNTSMVLSGNGAGQGLFDDFGARFEV 241 Query: 235 FG-NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 NL + + + G + + LSA G+ + ++S Sbjct: 242 KTENLSELAQTVAVVTNYRLLGSVASAEEMVLSAGIKAAKGS------GFEVKDLTMKSK 295 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN---DDLKKDD 350 +++ S N + D F E ++ D + Sbjct: 296 S------ISGTLELACTYAPFCTTSLNFSSIDLD----ALFPEGLGTEQDAYYADFQSSA 345 Query: 351 IQYSV 355 ++SV Sbjct: 346 ERFSV 350 >gi|254429799|ref|ZP_05043506.1| conserved hypothetical protein TIGR02099 [Alcanivorax sp. DG881] gi|196195968|gb|EDX90927.1| conserved hypothetical protein TIGR02099 [Alcanivorax sp. DG881] Length = 1247 Score = 62.6 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 40/351 (11%), Positives = 94/351 (26%), Gaps = 35/351 (9%) Query: 31 DFREDFERQATLIVGKKIAV---KGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLS 87 D+RE E + + + G + P + IR+ E S ++ + Sbjct: 17 DYRERLEHLFEERIQTPLTIAELNGTMS---GLVPQFVARQIRLPAPEGESPLV-LDEVV 72 Query: 88 MRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVS-----NWFQRKSTMDMIHNVILEK 141 + + L ++ + + + LN G + + + K Sbjct: 73 LSIDVFRSLWHRDLVLEEFSVRGVDLNLVRGEDGKIRLRGLDVLGQSDPESRPPLERILK 132 Query: 142 IHVKGGRIKIIDQE------SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195 + + + I D S L+ ++ + +++ + Sbjct: 133 LFYRQQLLSISDARLSLEWPGMPPLAASQLDATMTNTGGEHRLAVRVEARDRPLSLLAKI 192 Query: 196 NFDNKRSAFK-ITANFPAKNKAISLKIQL-FPLAYPIII-DLFGNLFWN---EKQPIYSG 249 + + A + A+ + + L L P+ + L ++ E SG Sbjct: 193 HLHDDAYALDEVDADIYTRFEGKRLHEWLPDIDKMPLDLGSLDASVALWGTLEGGEPISG 252 Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNFKI--SDGNVRISRYKLQSILPNSSTDEDNKTKV 307 V L + + + LS + D +S L P+ Sbjct: 253 QLQVDVPTLTLTEADTAWPLTGLSLRASLLREDDEATLSLSNLSGKTPSGPLTLG----- 307 Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358 D + NE ++ ++ V ++ Sbjct: 308 --DMALRWEARGELRQWQLRANELPVHAIS-QQFQSWPFSLPAPADKVRQQ 355 >gi|218691527|ref|YP_002399739.1| hypothetical protein ECED1_3895 [Escherichia coli ED1a] gi|218429091|emb|CAR09898.1| conserved hypothetical protein; putative membrane protein, putative transporter [Escherichia coli ED1a] Length = 1266 Score = 62.6 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|331649037|ref|ZP_08350125.1| conserved hypothetical protein [Escherichia coli M605] gi|331042784|gb|EGI14926.1| conserved hypothetical protein [Escherichia coli M605] Length = 1266 Score = 62.6 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 41/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 S + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTSITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|282900257|ref|ZP_06308208.1| protein of unknown function DUF490 [Cylindrospermopsis raciborskii CS-505] gi|281194762|gb|EFA69708.1| protein of unknown function DUF490 [Cylindrospermopsis raciborskii CS-505] Length = 1180 Score = 62.6 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 42/326 (12%), Positives = 84/326 (25%), Gaps = 24/326 (7%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66 I LG ++L+G D ++ T + + + + + + V F Sbjct: 27 IALGGSVLILLMGGMWWVRGFIHKDLVPLAQKGLTSTLNRPVQLGAMKEFSL---TGVRF 83 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126 I S I+ + + L+ D+ + P + ++ Sbjct: 84 AASGIPPTPTDSDRIAIQAVDVSFNPWDLVVNRHLKLDVTLIDPDIYIEQDNQQRWITTT 143 Query: 127 -RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 I L KI ++ GR+ ++ SD +L + F + + + Sbjct: 144 IAPPEEPGIIKTDLSKISIRNGRLVLV-PNQRLETPGSDTSLSVPITFAKLYGRVQLLDN 202 Query: 186 KGSVIAEGTGNFD---NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242 + TGN + A + L+ +I + + Sbjct: 203 NQKFKFDLTGNNQSGGDISIAGDMETKPTLMGNVNVKTKDLYIADISRLIPADIKVRSGK 262 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRL----------SGNFKISDGNVRISRYKLQS 292 + N L +L GN K + I Sbjct: 263 INSDIKIQLTPEDPVLLYGNANLEGVNWQLGKIPQPFNNTQGNIKFQGSAIEIDNLVGNY 322 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFS 318 S D++ N S Sbjct: 323 GKI--PVVAKG----SIDQKRGFNLS 342 >gi|218702012|ref|YP_002409641.1| hypothetical protein ECIAI39_3738 [Escherichia coli IAI39] gi|218371998|emb|CAR19854.1| conserved hypothetical protein; putative membrane protein, putative transporter [Escherichia coli IAI39] Length = 1266 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|56459497|ref|YP_154778.1| hypothetical protein IL0386 [Idiomarina loihiensis L2TR] gi|56178507|gb|AAV81229.1| Uncharacterized conserved membrane protein [Idiomarina loihiensis L2TR] Length = 1289 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 31/272 (11%), Positives = 95/272 (34%), Gaps = 13/272 (4%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHIL 59 +L ++ + L + +V VG + + + D E E+Q + +++ + + Sbjct: 7 ILNKLWLTLAIVLVLVAVGLSLLRYSLPYLPDLTEPLEQQLEARFQQPVSIS-DLSMAWT 65 Query: 60 P-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLS 117 PS+ ++ + ++E + ++ + + +F LL ++ ++ + + Sbjct: 66 REGPSIVLDNLVLLEREQSPVQVRVGKVHVVLDFWRTLLDQQLIAQQFILNDARIAVDIR 125 Query: 118 SKGVSNWFQRKSTMDMIHNV--ILEKIHVKGGRIKIID-QESDQVYFLSDLNLQISARFL 174 +N ++ + LEK + G + + + + + + L+ + Sbjct: 126 KFSAANEAEKLDLDYVNRLFLQQLEKFSLNNGELLLTNLRGVTREIDIDRLSWTNEGKKH 185 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKR---SAFKITANFPAKNKAISLKIQL-FPLAYPI 230 I ++ + + + R + N + + L+ QL Sbjct: 186 QGIGQFRMEDFATN-SLDFIIDLRGDRWSEFNGQFYVNSQNVDISPWLEEQLGDIDVQAS 244 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262 ++ G L ++ G+ + + L+ Sbjct: 245 NVNFTGWLDVRNG-QLFEGLVKLRDNRITWLD 275 >gi|327314687|ref|YP_004330124.1| hypothetical protein HMPREF9137_2484 [Prevotella denticola F0289] gi|326944175|gb|AEA20060.1| conserved hypothetical protein [Prevotella denticola F0289] Length = 1714 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 45/363 (12%), Positives = 102/363 (28%), Gaps = 42/363 (11%) Query: 2 LRRVLIGLGFLFS--VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIH 57 +RR L L + V+L L+ + + G ++++ + Sbjct: 7 MRRSLKWLVAAVATPVILFLILVGLLYCPPVQNWAVKQVAAYVSAHTGMEVSLD---HVS 63 Query: 58 ILPFPSVFFKDIRI-----DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112 + + +RI + + L + LPLL + V ++ Sbjct: 64 LSYPLDLQLDGLRILRQNDSIPNRKDTVADVRSLVASVDLLPLLESRVEVNELTFTGLKA 123 Query: 113 N-------FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII----------DQE 155 N + + + +V + K V+GG I + Q+ Sbjct: 124 NTVNFIGDLRIRGDLQRLHVVSHAVNLIGDSVRVNKADVEGGWIDVALGDTVPEDPNRQK 183 Query: 156 SDQVYFLSDLN-------LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208 + LN L + +++ + + KG+ + + ++ Sbjct: 184 PLWRVNIDRLNLSKTAFSLHLPGDTMSVHARFTKAVAKGTELLLHDNIYKVADLDWQGGT 243 Query: 209 NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268 +N ++ + G + P S A Sbjct: 244 FSYDQNYVRRVRQGFDAAHMAMRDVNIGIDSFLYAAPKLSLRVRTANFR-----ERSGLV 298 Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN-LLNFSENGAESMHD 327 + G F + ++R+ +LQ + + D+ L+ +G S+ D Sbjct: 299 LNDFRGAFTMDSTHIRLPGLRLQMPGTELAGHFEMDMNAFADDHPGQLSARMDGYLSLVD 358 Query: 328 LNE 330 L Sbjct: 359 LRP 361 >gi|320194722|gb|EFW69352.1| hypothetical protein EcoM_03164 [Escherichia coli WV_060327] Length = 1266 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|281180279|dbj|BAI56609.1| conserved hypothetical protein [Escherichia coli SE15] Length = 1266 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 41/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 S + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTSITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|54297668|ref|YP_124037.1| hypothetical protein lpp1719 [Legionella pneumophila str. Paris] gi|53751453|emb|CAH12871.1| hypothetical protein lpp1719 [Legionella pneumophila str. Paris] Length = 1273 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 89/288 (30%), Gaps = 28/288 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++ +GL L V V + W ++ + E T ++G+ + V+ Sbjct: 13 KKIWMGLAVLIIVAAVFSSVFRALTPWAKQYKGEVEEHLTSLLGQPVTVQTMETGWYWFE 72 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG 120 P V K IRI + + ++ L + L + I+ +YID HL + G Sbjct: 73 PVVKLKHIRI--HDGHNKSIYLDRLIVGVNLFKSLWNWRIQPGVLYIDDMHL-VFREKDG 129 Query: 121 VS-------------NWFQRKSTMDMIHNVILEKIHVKG--GRIKIIDQESDQVYFLSDL 165 + K+ + EK+ V+ + D + +++L Sbjct: 130 HWRIEGISRNAMKDTDITPEKTREILDWLAQQEKLIVRHVSAHLHFND---GSLIPVNEL 186 Query: 166 NLQISARFLNIISPLSID-SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 NL I + N + + + GN S + T + L Q Sbjct: 187 NLSIVNKGGNYKIKGEARLEQTNATVFQLLGNVQFDPSQIENTNGRFYFSAINVLPAQWQ 246 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 L + L G + S L L +L Sbjct: 247 NLLPKSSMQLEGG----KGNVSLWVDLEKGNISSIQAELRLKRLAWKL 290 >gi|110643480|ref|YP_671210.1| hypothetical protein ECP_3329 [Escherichia coli 536] gi|191173844|ref|ZP_03035365.1| conserved hypothetical protein [Escherichia coli F11] gi|215488554|ref|YP_002330985.1| hypothetical protein E2348C_3517 [Escherichia coli O127:H6 str. E2348/69] gi|110345072|gb|ABG71309.1| hypothetical protein YhdP [Escherichia coli 536] gi|190905894|gb|EDV65512.1| conserved hypothetical protein [Escherichia coli F11] gi|215266626|emb|CAS11065.1| conserved membrane protein, predicted transporter [Escherichia coli O127:H6 str. E2348/69] gi|222034955|emb|CAP77698.1| Uncharacterized protein yhdP [Escherichia coli LF82] gi|312947795|gb|ADR28622.1| hypothetical protein NRG857_16060 [Escherichia coli O83:H1 str. NRG 857C] Length = 1266 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|320322506|gb|EFW78599.1| hypothetical protein PsgB076_21297 [Pseudomonas syringae pv. glycinea str. B076] Length = 1271 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 30/287 (10%), Positives = 87/287 (30%), Gaps = 28/287 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A+ +G +++ G ++ F Sbjct: 13 RWGLSLCALVLVLAALYVSLGRQLTPLVAEYRVDVETRASSALGMPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P D+ + + GS +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVFLAHDVMVGE---GSSAVRLDRVRVVPDLWESLLTRQVRIAHLEVDGLQFMLRQDKE 128 Query: 120 GVSNWFQRKSTMDMIHNVI--------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 G + D + + + + ++ + L+ +NL ++ Sbjct: 129 GNWSVQGLPVRNDSPFDPGQVLEQMQMVSHLSLLDSQVTV-QPFDAAPLTLTYVNLSLAT 187 Query: 172 RFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + + G + K+ + L + Sbjct: 188 GSYHQRLDARLTLPDGQPFALNVRSRIQASQ----------WKDGEADVYASLPQSDWAK 237 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 + W + G ++ + + + G + Sbjct: 238 WLPKSLTREWTLSKLQAGGELWMSWGKGTVQSATARLNAPHVKGVYA 284 >gi|170683155|ref|YP_001745517.1| hypothetical protein EcSMS35_3541 [Escherichia coli SMS-3-5] gi|170520873|gb|ACB19051.1| conserved hypothetical protein [Escherichia coli SMS-3-5] Length = 1266 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 39/322 (12%), Positives = 90/322 (27%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWHLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|330941923|gb|EGH44640.1| hypothetical protein PSYPI_20610 [Pseudomonas syringae pv. pisi str. 1704B] Length = 355 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 33/337 (9%), Positives = 97/337 (28%), Gaps = 24/337 (7%) Query: 2 LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++R L L L +++ +P + R+ + + + + + + Sbjct: 1 MKRRYSWPLWTLAALIVLLIAVNIALPYLV-----RDYLNNKLADMGDYRGEIT-DVDLA 54 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + + K ++I + + + + + L V P +NF Sbjct: 55 LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTDPQINFV 113 Query: 116 LSSKGVSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 + + + + + L ++ + GRI + S + + S Sbjct: 114 DGGSKQDSQTGQGTDWRTQMNKLLPITLNELRIDNGRITFNNFNSKPKVKIEADQVNASI 173 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230 L + + + +G + + + K++ + Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESSARFDPFSNFEDFDFKLRATGIQLKK 230 Query: 231 IIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 + D ++ V D +L ++ N++ N ++ Sbjct: 231 LNDFSSAYGKFDFNAGDGDVVIEAQADKGQLKGYIKPLLRNVDVFNWQQDVENKDKGVFR 290 Query: 290 --LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 ++++ S T N+ + L+ S + + Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327 >gi|306816420|ref|ZP_07450552.1| hypothetical protein ECNC101_07379 [Escherichia coli NC101] gi|305849985|gb|EFM50444.1| hypothetical protein ECNC101_07379 [Escherichia coli NC101] Length = 1266 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|330987078|gb|EGH85181.1| hypothetical protein PLA107_18769 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 1271 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 30/287 (10%), Positives = 87/287 (30%), Gaps = 28/287 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A+ +G +++ G ++ F Sbjct: 13 RWGLSLCALVLVLAALYVSLGRQLTPLVAEYRVDVETRASSALGMPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P D+ + + GS +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVFLAHDVMVGE---GSSAVRLDRVRVVPDLWESLLARQVRIAHLEVDGLQFMLRQDKE 128 Query: 120 GVSNWFQRKSTMDMIHNVI--------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 G + D + + + + ++ + L+ +NL ++ Sbjct: 129 GNWSVQGLPVRNDSPFDPGQVLEQMQMVSHLSLLDSQVTV-QPFDAAPLTLTYVNLSLAT 187 Query: 172 RFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + + G + K+ + L + Sbjct: 188 GIYHQRLDARLTLPDGQPFALNVRSRIQASQ----------WKDGEADVYASLPQSDWAK 237 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 + W + G ++ + + + G + Sbjct: 238 WLPKSLTREWTLSKLQAGGELWMSWGKGTVQSATARLNAPHVKGVYA 284 >gi|153948116|ref|YP_001399396.1| hypothetical protein YpsIP31758_0403 [Yersinia pseudotuberculosis IP 31758] gi|152959611|gb|ABS47072.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP 31758] Length = 1305 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 108/335 (32%), Gaps = 38/335 (11%) Query: 2 LRRVLIGL---GFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56 +RR+ + G VV+ + + ++R + + G + V G ++ Sbjct: 1 MRRLPKIMFATGATIIVVVALLVSALRMMLPLINEYRPQIVAKIQSVSGIPLDV-GFMQG 59 Query: 57 HILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 F P++ +DIR + +++ +++ + LL + D+ Q L+ Sbjct: 60 TWETFGPTLELRDIRAQMPKAD---LQVQRVTLALDVWQSLLHWRWQFRDLTFYQLQLDL 116 Query: 115 YLSSKGVSNWF--QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISA 171 + + N + I L++ ++ RI + + + L S+ Sbjct: 117 HTTLDATQNNGSNLETGNVHNIFLRQLDRFDLRNSRISFLTPSGPRAELEIPQLTWLNSS 176 Query: 172 RFLNIISPLSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 +S+ +I G + + + + + ++ +Q + Sbjct: 177 TRHRAEGQISLSTINGQHGVVQVRMDLHDNQGILN----------NGTVYMQADNIDLKP 226 Query: 231 IID--LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 I L N + + + S+ N+ LS ++ + + + + + Sbjct: 227 WISRWLQNNTGLDNAEFSLAAWLSIKSGEVYRGNVLLSQGQANWT--VGSNSHQLSVDNF 284 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 L+ + D +LN +G Sbjct: 285 VLEGRRQGNGWQID---------APVLNLKTDGQA 310 >gi|91212665|ref|YP_542651.1| hypothetical protein UTI89_C3676 [Escherichia coli UTI89] gi|117625529|ref|YP_858852.1| hypothetical protein APECO1_3199 [Escherichia coli APEC O1] gi|218560307|ref|YP_002393220.1| hypothetical protein ECS88_3621 [Escherichia coli S88] gi|237706008|ref|ZP_04536489.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|91074239|gb|ABE09120.1| hypothetical protein YhdP [Escherichia coli UTI89] gi|115514653|gb|ABJ02728.1| conserved membrane protein, predicted transporter [Escherichia coli APEC O1] gi|218367076|emb|CAR04847.1| conserved hypothetical protein; putative membrane protein, putative transporter [Escherichia coli S88] gi|226899048|gb|EEH85307.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|294491796|gb|ADE90552.1| conserved hypothetical protein TIGR02099 [Escherichia coli IHE3034] gi|323951243|gb|EGB47118.1| adhesin HecA family protein [Escherichia coli H252] Length = 1266 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|83943201|ref|ZP_00955661.1| hypothetical protein EE36_13508 [Sulfitobacter sp. EE-36] gi|83846209|gb|EAP84086.1| hypothetical protein EE36_13508 [Sulfitobacter sp. EE-36] Length = 1114 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 36/371 (9%), Positives = 95/371 (25%), Gaps = 46/371 (12%) Query: 3 RRVLIGLGFLFSVVLVGAFTVP--LFIDWTDFREDFERQATL-----IVGK-KIAVKGGI 54 + L+ + + + + A + + E + +G ++ + Sbjct: 21 KWSLLVISLIVATIAGAAIYMIRSPIVVPEWLETRIEERFAKDMPLARIGFGEMVLIVDE 80 Query: 55 KIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 P V +D+ I + S + + LL+G+++ D+ + N Sbjct: 81 GWR----PRVRLRDVNITNPQGVS-FAAFREVRASFSIQGLLAGDVQPRDIAMSGVVANL 135 Query: 115 YLSSKGVSNWFQRKSTMDMIHNV--------------------ILEKIHVKGGRIKIIDQ 154 G T L I ++ ++ D Sbjct: 136 RRDKDGRVALSAASGTAPAERRAATMPQLIGQLDTVFETKALSRLRSIELRALTLRYTDL 195 Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214 +SD+++ + L + N+ + + G + + + + Sbjct: 196 QSDRMWTVDGGRLLLDREGDNLRMTAELAVLGGGADVATLSANYSSKIGDTASQFGVNFD 255 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLF-WNEKQPIYSGVFSVAGDFSKLLN----LELSAKK 269 + I + A+ + L ++ G F ++ A Sbjct: 256 GVSAGDIAVQNPAFAWLKVLRASISGSVRSSLDEDGTFEPLNATLQIGAGVVQPNERATP 315 Query: 270 SRLSG-----NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL-NFSENGAE 323 G ++ +R ++ S + + D+ L Sbjct: 316 IPFDGARSYFSYDPDQRLLRFDELSVE--SKWVSGRIEGAASLGIDDSGKLGELVAQVRL 373 Query: 324 SMHDLNETDFF 334 + D + Sbjct: 374 RDLVADPADIY 384 >gi|257482238|ref|ZP_05636279.1| hypothetical protein PsyrptA_03152 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011521|gb|EGH91577.1| hypothetical protein PSYTB_17959 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 1271 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 30/287 (10%), Positives = 87/287 (30%), Gaps = 28/287 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A+ +G +++ G ++ F Sbjct: 13 RWGLSLCALVLVLAALYVSLGRQLTPLVAEYRVDVETRASSALGMPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P D+ + + GS +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVFLAHDVMVGE---GSSAVRLDRVRVVPDLWESLLARQVRIAHLEVDGLQFMLRQDKE 128 Query: 120 GVSNWFQRKSTMDMIHNVI--------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 G + D + + + + ++ + L+ +NL ++ Sbjct: 129 GNWSVQGLPVRNDSPFDPGQVLEQMQMVSHLSLLDSQVTV-QPFDAAPLTLTYVNLSLAT 187 Query: 172 RFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + + G + K+ + L + Sbjct: 188 GSYHQRLDARLTLPDGQPFALNVRSRIQASQ----------WKDGEADVYASLPQSDWAK 237 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 + W + G ++ + + + G + Sbjct: 238 WLPKSLTREWTLSKLQAGGELWMSWGKGTVQSATARLNAPHVKGVYA 284 >gi|330868268|gb|EGH02977.1| hypothetical protein PSYAE_13657 [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 959 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 36/284 (12%), Positives = 95/284 (33%), Gaps = 22/284 (7%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A+ +G +++ G ++ F Sbjct: 13 RWGLSLCALVLVLAALYVSLGRQLTPLVAEYRVDVETRASSALGMPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P D+ + + GS +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVFLAHDVMVGE---GSSAVRLDRVRVVPDLWESLLARQVRIAHLEVDGLQFMLRQDKE 128 Query: 120 GVSNWFQRKSTMDMIHNV--ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 G + D + +LE++ + + + Q + Q + + L L Sbjct: 129 GNWSVQGLPVRNDSPFDPGQVLEQMQMVSHLLLLDSQVTVQPFDAAPLTL--------TY 180 Query: 178 SPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIID 233 LS+ + + D + A + + K+ + L + + Sbjct: 181 VNLSLATGSYHQRLDARLTLPDGQPFALNVRSRIQASQWKDGEADVYASLPQSDWARWLP 240 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 W + G ++ + + + G + Sbjct: 241 KSLTREWTLSKLQAGGELWMSWGKGTVQSATARLNAPHVKGVYA 284 >gi|75906465|ref|YP_320761.1| hypothetical protein Ava_0240 [Anabaena variabilis ATCC 29413] gi|75700190|gb|ABA19866.1| Protein of unknown function DUF490 [Anabaena variabilis ATCC 29413] Length = 2049 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 36/295 (12%), Positives = 84/295 (28%), Gaps = 11/295 (3%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +L R + +G L V L+G + + T + + + + + Sbjct: 22 ILSRGGMAVGGLLIVGLMGGVWRLWTFVQKELTPLAQESLTTTLNRPVQLGKVTNFSL-- 79 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 V F I + ++ + + L L+ ++ + P + ++G Sbjct: 80 -TGVQFAASSIPATPTDPDKLTMDAVEVGFNPLLLVFNRQLKLNVTLVNPDVYIEQDNQG 138 Query: 121 VSNWFQ-RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 L+ I+ + G++ ++ Q + + S+ + I P Sbjct: 139 RWITTTIAPPGAAGAIKTDLDHINFRNGKLSLLPQVRNLAVGEAKTTTPSSSLYPPIPCP 198 Query: 180 LSIDSIKGSVIAE---GTGNFDNKRSAFKITA-NFPAKNKAISLKIQLFPLAYPIIIDLF 235 + GT K +A ++ ++ ++ P I + Sbjct: 199 EGKACTLPPLEFSQLNGTAQILENNQLIKFSAKGISDSGGSVEMEGEVRPKTTAANIQVR 258 Query: 236 GN---LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 G + L L + L G+ + V+I R Sbjct: 259 GQELLAADVSRLVKLPVGLEAGKVNGDLRVELLPGQTPLLYGSADLQKVTVQIPR 313 >gi|302187098|ref|ZP_07263771.1| hypothetical protein Psyrps6_12135 [Pseudomonas syringae pv. syringae 642] Length = 355 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 34/337 (10%), Positives = 98/337 (29%), Gaps = 24/337 (7%) Query: 2 LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++R L L L +++ +P + R+ + + + + + + Sbjct: 1 MKRRYSWPLWTLAALVVLLIAVNIALPYLV-----RDYLNDKLADMGDYRGEIA-DVDLA 54 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + + K ++I + + + + + L V P +NF Sbjct: 55 LWRG-AYRIKRLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTGPQINFV 113 Query: 116 LSSKGVSNWFQRKSTM----DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 + + + D + + L ++ + GRI + S + + S Sbjct: 114 DGGSKQDSQTGQGTDWRTQMDKLLPMTLNELRIDNGRITFNNFNSKPKVKIEADQVNASI 173 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230 L + + + +G + + + K++ + Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESSARFDPFSNFEDFDFKLRATGIQLKK 230 Query: 231 IIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 + D ++ V D +L ++ N++ N ++ Sbjct: 231 LNDFSSAYGKFDFNAGDGDVVIEAQADKGQLKGYIKPLLRNVDVFNWQQDVENKDKGVFR 290 Query: 290 --LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 ++++ S T N+ + L+ S + + Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327 >gi|71737866|ref|YP_276288.1| hypothetical protein PSPPH_4166 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558419|gb|AAZ37630.1| conserved hypothetical protein TIGR02099 [Pseudomonas syringae pv. phaseolicola 1448A] Length = 1271 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 30/287 (10%), Positives = 87/287 (30%), Gaps = 28/287 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A+ +G +++ G ++ F Sbjct: 13 RWGLSLCALVLVLAALYVSLGRQLTPLVAEYRVDVETRASSALGMPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P D+ + + GS +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVFLAHDVMVGE---GSSAVRLDRVRVVPDLWESLLARQVRIAHLEVDGLQFMLRQDKE 128 Query: 120 GVSNWFQRKSTMDMIHNVI--------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 G + D + + + + ++ + L+ +NL ++ Sbjct: 129 GNWSVQGLPVRNDSPFDPGQVLEQMQMVSHLSLLDSQVTV-QPFDAAPLTLTYVNLSLAT 187 Query: 172 RFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + + G + K+ + L + Sbjct: 188 GSYHQRLDARLTLPDGQPFALNVRSRIQASQ----------WKDGEADVYASLPQSDWAK 237 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 + W + G ++ + + + G + Sbjct: 238 WLPKSLTREWTLSKLQAGGELWMSWGKGTVQSATARLNAPHVKGVYA 284 >gi|320330025|gb|EFW86012.1| hypothetical protein PsgRace4_10372 [Pseudomonas syringae pv. glycinea str. race 4] Length = 1271 Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 32/282 (11%), Positives = 88/282 (31%), Gaps = 18/282 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A+ +G +++ G ++ F Sbjct: 13 RWGLSLCALVLVLAALYVSLGRQLTPLVAEYRVDVETRASSALGMPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P D+ + + GS +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVFLAHDVMVGE---GSSAVRLDRVRVVPDLWESLLARQVRIAHLEVDGLQFMLRQDKE 128 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 G + D + ++ ++ D + + A Sbjct: 129 GNWSVQGLPVRNDSPFDP---GQVLEQMQMVSHLSLLDSQVTVQPFDA---APLTLTYVN 182 Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235 LS+ + + D + A + + K+ + L + + Sbjct: 183 LSLATGSYHQRLDARLTLPDGQPFALNVRSRIQASQWKDGEADVYASLPQSDWAKWLPKS 242 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 W + G ++ + + + G + Sbjct: 243 LTREWTLSKLQAGGELWMSWGKGTVQSATARLNAPHVKGVYA 284 >gi|110636633|ref|YP_676840.1| hypothetical protein CHU_0208 [Cytophaga hutchinsonii ATCC 33406] gi|110279314|gb|ABG57500.1| conserved hypothetical protein; possible membrane protein [Cytophaga hutchinsonii ATCC 33406] Length = 806 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 94/288 (32%), Gaps = 19/288 (6%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI---LPFPSVFFKDIRIDQKEDGSF-- 79 L+I D Q + K+ V I I I P S+ F D++ + G Sbjct: 2 LYIYKDDIIYLATMQINKRLNTKVDVSKKIDISILEKFPELSIGFHDVKCYEPGAGKPVI 61 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI---HN 136 + ++ L + + + +G + ++++ H++ GV N+ K + Sbjct: 62 FASVKNLFITFDIKDVWNGNYIIDKVFLEDGHIHLRTDENGVHNFMILKKDTSTAKSNSD 121 Query: 137 VILEKIHVKGGRIKIIDQESD----QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE 192 + I +K + S+ +++ +L + I + + + Sbjct: 122 FSISFIQLKNIDFIYDFRPSNHLYQSDIKITEASLVHARNDFTIHVTGDMHTDGIRINEN 181 Query: 193 GTGNFDNKRSAFKITANFPAKNKAI---SLKIQLFPLAYPIIIDLF---GNLFWNEKQPI 246 + + + KI N ++ +I +L I A + D+ +L + + Sbjct: 182 NFLQNKDIKLSSKIRYNTESEVFSITPSTLHINTGAYAVEGLYDIKKSFVDLRFKTDKND 241 Query: 247 YSGVFS-VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 S + ++ + S +G K + N + Sbjct: 242 IQSFVSILPKAYAASIQEYKSTGNVYFNGTIKGTASNAHSPSININFG 289 >gi|320325244|gb|EFW81311.1| hypothetical protein PsgB076_07452 [Pseudomonas syringae pv. glycinea str. B076] Length = 355 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 34/337 (10%), Positives = 97/337 (28%), Gaps = 24/337 (7%) Query: 2 LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++R L L L +++ +P + R+ + + + + + + Sbjct: 1 MKRRYSWPLWTLAALVVLLIAVNIALPHLV-----RDYLNDKLADMGDYRGEIT-DVDLA 54 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + + K ++I + + + + + L V P +NF Sbjct: 55 LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTGPQINFV 113 Query: 116 LSSKGVSNWFQRKSTM----DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 S ++ + + D + + L ++ + GRI + S + + S Sbjct: 114 DSGSKQNSQTGQGTDWRTQMDKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQVNASI 173 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230 L + + + +G + + + K++ + Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESSARFDPFSNFEDFDFKLRATGIQLKK 230 Query: 231 IIDLF---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 + D G +N L + + + + + + R Sbjct: 231 LNDFSSAYGKFDFNAGDGDLVIEAQADKGQLSGYIKPLLRNVDVFNWHQDVENKDKGVFR 290 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 ++++ S T N+ + L+ S + + Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327 >gi|94986495|ref|YP_594428.1| uncharacterized protein involved in outer membrane biogenesis [Lawsonia intracellularis PHE/MN1-00] gi|94730744|emb|CAJ54106.1| uncharacterized protein involved in outer membrane biogenesis [Lawsonia intracellularis PHE/MN1-00] Length = 1075 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 110/323 (34%), Gaps = 29/323 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFI---DWTDFREDFERQATLIVGKKIAVKGGIKIHI 58 +R LI + LF + ++ F + + + + I HI Sbjct: 1 MRSFLISIVTLFLLGIIVFFGITFYFIKQHPQYITNKILSTISKQLKDTSISANSIGFHI 60 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 +PFP ++ ++ + ++ + I+ + + +LSG I ++ + + QP + L + Sbjct: 61 VPFPKLYLTNVILQTQKGDT--IHIKECLITPKITNILSGNISIYSIEVIQPIASIILQN 118 Query: 119 KGVSN-----WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 + N + K ++ + K+ ++ G I + +D + + +N +I Sbjct: 119 EQKKNSKTTGYAIPKQVSHLLQLITDSKLFIENGSITFQN--NDYCFKIIGINGKIGVSK 176 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 + S L + + + T + ++ + I K+QL P I+ Sbjct: 177 T-LTSSLKLTADEIIWEIMNTVSNNSSTAQKSIE------------KVQLHIEDMPYKIN 223 Query: 234 LFGNLFWNEKQPIYSG-VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 ++ P+Y + F + + + ++ +F + + Sbjct: 224 ---TALLHDTSPLYDLFTNTKKTTFKVSGAIPTTNTANNITFDFTTKLEKDNSDKLTMHG 280 Query: 293 ILPNSSTDEDNKTKVSQDEENLL 315 L T + T + Sbjct: 281 QLHIEGTLPNGNTSIPILLSVPF 303 >gi|94987131|ref|YP_595064.1| hypothetical protein LI0689 [Lawsonia intracellularis PHE/MN1-00] gi|94731380|emb|CAJ54743.1| uncharacterized protein conserved in bacteria [Lawsonia intracellularis PHE/MN1-00] Length = 1382 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 50/380 (13%), Positives = 111/380 (29%), Gaps = 29/380 (7%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +L ++L L F++ L T LFI + + + ++ ++ + I I P Sbjct: 6 ILSKLLYTLLGAFTLFLGLIITGILFIRTSTGIAWIKNTVSSLLQQQGIILQVSSI-IGP 64 Query: 61 FP-SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-NFYLSS 118 FP + ++ + I L +++ L G++ + ++ L ++ Sbjct: 65 FPEQITINELSLSDVNG--TYLTISNLEIQSNLWALFKGQLEILSFELNDLVLYRLPSNN 122 Query: 119 KGVSNWFQ--RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 + + E I ++ I SD + L+L+ N Sbjct: 123 NLKKSSTSFVLPHISFDLTPWWTEHIRIQNIHINNTQLSSDIIGIPLVLSLEGDGTLTNW 182 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAF------KITANFPAKNKAISLKIQLFPLAYPI 230 + S GT + ++ F + A L P+ Sbjct: 183 NGTFQLSS-SNKTKIIGTLRYQGNKTQFFEYVHPTRIVTLEIDSVADKKSYNNSILEQPL 241 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 + L + + ++S + ++E+S ++ + + K + +L Sbjct: 242 HLHLSI-YPEHNRIILHSLLAEYGSWLLTSESIEVSNEQLKGNILLKYNGEATH----QL 296 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN----ETDFFEEEEKKNKNDD- 345 NSS + + E N +T+ + + D Sbjct: 297 PIKKLNSSITLSGSL-----NKPNFSIQMTLPEINITKNIIDLQTELVINLGLFSTHSDI 351 Query: 346 LKKDDIQYSVNKKEEKDNSH 365 L I S Sbjct: 352 LTSGTITVQGETIPNSILSS 371 >gi|213969711|ref|ZP_03397846.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|301384326|ref|ZP_07232744.1| hypothetical protein PsyrptM_16895 [Pseudomonas syringae pv. tomato Max13] gi|302062128|ref|ZP_07253669.1| hypothetical protein PsyrptK_19251 [Pseudomonas syringae pv. tomato K40] gi|302130118|ref|ZP_07256108.1| hypothetical protein PsyrptN_01920 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925519|gb|EEB59079.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] Length = 356 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 34/341 (9%), Positives = 98/341 (28%), Gaps = 31/341 (9%) Query: 2 LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++R L L L +++ +P + R+ + + + V + + Sbjct: 1 MKRRYSWPLWTLAALVVLLIAINIALPYVV-----RDYLNDKLADMGEYRGEVT-DVDLA 54 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + + K ++I + + + + + L V P +NF Sbjct: 55 LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTNPQINFV 113 Query: 116 LSSKGVSNWFQRKSTMDMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 G +N ++ + L ++ + GRI + S + + Sbjct: 114 ---DGGNNKQASQTGQGTDWRTQMNKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQV 170 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPL 226 S L + + + +G + + + +++ + Sbjct: 171 NASFYNLTNVVDVEGNRDA---EFKGKARLLGHADLESTARFDPFSNFEDFDFRLRATGI 227 Query: 227 AYPIIIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 + D ++ V + +L ++ N++ N Sbjct: 228 QLKKLNDFSSAYAKFDFNAGDGDVVIEAQANKGQLSGYIKPLLRNVDVFNWQQDVQNKDK 287 Query: 286 SRYK--LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 ++ ++++ S T N+ + L+ S + + Sbjct: 288 GVFRSIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 328 >gi|331019035|gb|EGH99091.1| hypothetical protein PLA106_23608 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 356 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 34/341 (9%), Positives = 98/341 (28%), Gaps = 31/341 (9%) Query: 2 LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++R L L L +++ +P + R+ + + + V + + Sbjct: 1 MKRRYSWPLWTLAALVVLLIAINIALPYVV-----RDYLNDKLADMGEYRGEVT-DVDLA 54 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + + K ++I + + + + + L V P +NF Sbjct: 55 LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTNPQINFV 113 Query: 116 LSSKGVSNWFQRKSTMDMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 G +N ++ + L ++ + GRI + S + + Sbjct: 114 ---DGGNNKQASQTGQGTDWRTQMNKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQV 170 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPL 226 S L + + + +G + + + +++ + Sbjct: 171 NASFYNLTNVVDVEGNRDA---EFKGKARLLGHADLESTARFDPFSNFEDFDFRLRATGI 227 Query: 227 AYPIIIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 + D ++ V + +L ++ N++ N Sbjct: 228 QLKKLNDFSSAYAKFDFNAGDGDVVIEAQANKGQLSGYIKPLLRNVDVFNWQQDVQNKDK 287 Query: 286 SRYK--LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 ++ ++++ S T N+ + L+ S + + Sbjct: 288 GVFRSIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 328 >gi|170022721|ref|YP_001719226.1| hypothetical protein YPK_0470 [Yersinia pseudotuberculosis YPIII] gi|169749255|gb|ACA66773.1| conserved hypothetical protein [Yersinia pseudotuberculosis YPIII] Length = 1307 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 108/335 (32%), Gaps = 38/335 (11%) Query: 2 LRRVLIGL---GFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56 +RR+ + G VV+ + + ++R + + G + V G ++ Sbjct: 1 MRRLPKIMFATGATIIVVVALLVSALRMMLPLINEYRPQIVAKIQSVSGIPLDV-GFMQG 59 Query: 57 HILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 F P++ +DIR + +++ +++ + LL + D+ Q L+ Sbjct: 60 TWETFGPTLELRDIRAQMPKAD---LQVQRVTLALDVWQSLLHWRWQFRDLTFYQLQLDL 116 Query: 115 YLSSKGVSNWF--QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISA 171 + + N + I L++ ++ RI + + + L S+ Sbjct: 117 HTTLDATQNNGSNLETGNVHNIFLRQLDRFDLRNSRISFLTPSGPRAELEIPQLTWLNSS 176 Query: 172 RFLNIISPLSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 +S+ +I G + + + + + ++ +Q + Sbjct: 177 TRHRAEGQISLSTINGQHGVVQVRMDLHDNQGILN----------NGTVYMQADNIDLKP 226 Query: 231 IID--LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 I L N + + + S+ N+ LS ++ + + + + + Sbjct: 227 WISRWLQNNTGLDNAEFSLAAWLSIKSGEIYRGNVLLSQGQANWT--VGSNSHQLSVDNF 284 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 L+ + D +LN +G Sbjct: 285 VLEGRRQGNGWQID---------APVLNLKTDGQA 310 >gi|28871602|ref|NP_794221.1| hypothetical protein PSPTO_4467 [Pseudomonas syringae pv. tomato str. DC3000] gi|28854854|gb|AAO57916.1| conserved protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] Length = 1271 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 34/297 (11%), Positives = 91/297 (30%), Gaps = 19/297 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A+ +G +++ G ++ F Sbjct: 13 RWSLSLCALILVLAALYVSLGRQLAPLVAEYRVDVETRASSALGIPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + D+ + + G+ +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVLLAHDVMVGE---GANALRLDRVRVVPDLWASLLARQVRIAHLEVDGLQFTIKQDQE 128 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 G D + + ++ D + L+ A Sbjct: 129 GGWAVQGLPLRNDTPLDP---GQLLNQMQMVSHLSLLDSQVTVQPLDA---APLTLTYVN 182 Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235 LS+ + + D + A + + K+ L + + Sbjct: 183 LSLTTGSYHQRLDARLTLPDGQPFALNVRSRIQASQWKDGEADFYASLPQSDWAKWLPKS 242 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 W + G ++ + + ++ G + I L + Sbjct: 243 ATREWTLSRLQAGGDLWMSWGKGTVQSATARLNAPQIKGVY-ADRKPSTIDNLALNA 298 >gi|311277793|ref|YP_003940024.1| hypothetical protein Entcl_0462 [Enterobacter cloacae SCF1] gi|308746988|gb|ADO46740.1| hypothetical protein Entcl_0462 [Enterobacter cloacae SCF1] Length = 1266 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 34/322 (10%), Positives = 95/322 (29%), Gaps = 32/322 (9%) Query: 2 LRRV----LIGLGFLFSVVLVGAFTVPLFID-WTDFREDFERQATLIVGKKIAVKGGIKI 56 +RR+ L+ + L V + + L + D+R + + G ++ + Sbjct: 1 MRRLPGIILLTVATLIVAVALLVSGLRLVLPHLNDWRPQLLAKISQATGHRVE-ASELTA 59 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN- 113 + P++ +DI+ + + G+ +++ + LL + + Q + Sbjct: 60 NWQNFGPTLDVRDIKTELNDGGT--LSARRVTLALDVWQSLLHMRWQFRQLTFWQLQIRT 117 Query: 114 ---FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 +++G + + + + ++ + + + L+ +N Sbjct: 118 NTPLQRNTEGE---PLKTDRIGDLFLRQFDHFTLRDSHLSFLTLSGQRAELSIPQLTWVN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITANFPAKNKAISLK--IQL 223 + R +S S+ G + + + ++ + L +Q Sbjct: 175 GKNRHRAEGELSLSSLTGQHGVMKVRMDLRDENGLLNEGRVWLQADDIDVKPWLGRWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEK-QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G K L+ + G Sbjct: 235 NIALTSARFSLEGWMTLDKGDIASGDVWLKQGGASWKGDKRTHDLVVDNLTAHVSSEQGG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + +P++ D K Sbjct: 295 WQFR-------IPDTRIAIDGK 309 >gi|218696944|ref|YP_002404611.1| hypothetical protein EC55989_3658 [Escherichia coli 55989] gi|218353676|emb|CAU99919.1| conserved hypothetical protein; putative membrane protein, putative transporter [Escherichia coli 55989] Length = 1266 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|45443605|ref|NP_995144.1| hypothetical protein YP_3876 [Yersinia pestis biovar Microtus str. 91001] gi|108809674|ref|YP_653590.1| hypothetical protein YPA_3683 [Yersinia pestis Antiqua] gi|108813661|ref|YP_649428.1| hypothetical protein YPN_3501 [Yersinia pestis Nepal516] gi|145597593|ref|YP_001161669.1| hypothetical protein YPDSF_0277 [Yersinia pestis Pestoides F] gi|153997391|ref|ZP_02022491.1| putative exported protein [Yersinia pestis CA88-4125] gi|162419054|ref|YP_001605735.1| hypothetical protein YpAngola_A1193 [Yersinia pestis Angola] gi|165927573|ref|ZP_02223405.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165937502|ref|ZP_02226065.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011368|ref|ZP_02232266.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166214155|ref|ZP_02240190.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167401981|ref|ZP_02307464.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420583|ref|ZP_02312336.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425597|ref|ZP_02317350.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|218930681|ref|YP_002348556.1| hypothetical protein YPO3670 [Yersinia pestis CO92] gi|229836818|ref|ZP_04456983.1| putative exported protein [Yersinia pestis Pestoides A] gi|229839283|ref|ZP_04459442.1| putative exported protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229899846|ref|ZP_04514987.1| putative exported protein [Yersinia pestis biovar Orientalis str. India 195] gi|229904157|ref|ZP_04519268.1| putative exported protein [Yersinia pestis Nepal516] gi|45438475|gb|AAS64021.1| putative exported protein [Yersinia pestis biovar Microtus str. 91001] gi|108777309|gb|ABG19828.1| hypothetical protein YPN_3501 [Yersinia pestis Nepal516] gi|108781587|gb|ABG15645.1| hypothetical protein YPA_3683 [Yersinia pestis Antiqua] gi|115349292|emb|CAL22259.1| putative exported protein [Yersinia pestis CO92] gi|145209289|gb|ABP38696.1| hypothetical protein YPDSF_0277 [Yersinia pestis Pestoides F] gi|149289028|gb|EDM39108.1| putative exported protein [Yersinia pestis CA88-4125] gi|162351869|gb|ABX85817.1| conserved hypothetical protein [Yersinia pestis Angola] gi|165914607|gb|EDR33221.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. IP275] gi|165920467|gb|EDR37744.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989752|gb|EDR42053.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166204642|gb|EDR49122.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166961389|gb|EDR57410.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048567|gb|EDR59975.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055611|gb|EDR65404.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229678275|gb|EEO74380.1| putative exported protein [Yersinia pestis Nepal516] gi|229687338|gb|EEO79413.1| putative exported protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695649|gb|EEO85696.1| putative exported protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705761|gb|EEO91770.1| putative exported protein [Yersinia pestis Pestoides A] gi|320017163|gb|ADW00735.1| putative exported protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 1307 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 108/335 (32%), Gaps = 38/335 (11%) Query: 2 LRRVLIGL---GFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56 +RR+ + G VV+ + + ++R + + G + V G ++ Sbjct: 1 MRRLPKIMFATGATIIVVVALLVSALRMMLPLINEYRPQIVAKIQSVSGIPLDV-GFMQG 59 Query: 57 HILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 F P++ +DIR + +++ +++ + LL + D+ Q L+ Sbjct: 60 TWETFGPTLELRDIRAQMPKAD---LQVQRVTLALDVWQSLLHWRWQFRDLTFYQLQLDL 116 Query: 115 YLSSKGVSNWF--QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISA 171 + + N + I L++ ++ RI + + + L S+ Sbjct: 117 HTTLDATQNNGSNLETGNVHNIFLRQLDRFDLRNSRISFLTPSGPRAELEIPQLTWLNSS 176 Query: 172 RFLNIISPLSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 +S+ +I G + + + + + ++ +Q + Sbjct: 177 TRHRAEGQISLSTINGQHGVVQVRMDLHDNQGILN----------NGTVYMQADNIDLKP 226 Query: 231 IID--LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 I L N + + + S+ N+ LS ++ + + + + + Sbjct: 227 WISRWLQNNTGLDNAEFSLAAWLSIKSGEVYRGNVLLSQGQANWT--VGSNSHQLSVDNF 284 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 L+ + D +LN +G Sbjct: 285 VLEGRRQGNGWQID---------APVLNLKTDGQA 310 >gi|301383135|ref|ZP_07231553.1| hypothetical protein PsyrptM_10887 [Pseudomonas syringae pv. tomato Max13] Length = 1271 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 93/297 (31%), Gaps = 19/297 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A +G +++ G ++ F Sbjct: 13 RWSLSLCALILVLAALYVSLGRQLTPLVAEYRVDVETRARSALGIPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + D+ + + G+ +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVLLAHDVMVGE---GANALRLDRVRVVPDLWASLLARQVRIAHLEVDGLQFTIKQDQE 128 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 G D + L ++ + ++ D + L+ A Sbjct: 129 GGWAVQGLPLRNDTP--LDLGQL-LNQMQMVSHLSLLDSQVTVQPLDA---APLTLTYVN 182 Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235 LS+ + + D + A + + K+ L + + Sbjct: 183 LSLTTGSYHQRLDARLTLPDGQPFALNVRSRIQASQWKDGEADFYASLPQSDWAKWLPKS 242 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 W + G ++ + + ++ G + I L + Sbjct: 243 ATREWTLSRLQAGGDLWMSWGKGTVQSATARLNAPQIKGVY-ADRKPSTIDNLALNA 298 >gi|51597851|ref|YP_072042.1| hypothetical protein YPTB3560 [Yersinia pseudotuberculosis IP 32953] gi|186897045|ref|YP_001874157.1| hypothetical protein YPTS_3747 [Yersinia pseudotuberculosis PB1/+] gi|51591133|emb|CAH22798.1| putative exported protein [Yersinia pseudotuberculosis IP 32953] gi|186700071|gb|ACC90700.1| conserved hypothetical protein [Yersinia pseudotuberculosis PB1/+] Length = 1307 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 108/335 (32%), Gaps = 38/335 (11%) Query: 2 LRRVLIGL---GFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56 +RR+ + G VV+ + + ++R + + G + V G ++ Sbjct: 1 MRRLPKIMFATGATIIVVVALLVSALRMMLPLINEYRPQIVAKIQSVSGIPLDV-GFMQG 59 Query: 57 HILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 F P++ +DIR + +++ +++ + LL + D+ Q L+ Sbjct: 60 TWETFGPTLELRDIRAQMPKAD---LQVQRVTLALDVWQSLLHWRWQFRDLTFYQLQLDL 116 Query: 115 YLSSKGVSNWF--QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISA 171 + + N + I L++ ++ RI + + + L S+ Sbjct: 117 HTTLDATQNNGSNLETGNVHNIFLRQLDRFDLRNSRISFLTPSGPRAELEIPQLTWLNSS 176 Query: 172 RFLNIISPLSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 +S+ +I G + + + + + ++ +Q + Sbjct: 177 TRHRAEGQISLSTINGQHGVVQVRMDLHDNQGILN----------NGTVYMQADNIDLKP 226 Query: 231 IID--LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 I L N + + + S+ N+ LS ++ + + + + + Sbjct: 227 WISRWLQNNTGLDNAEFSLAAWLSIKSGEIYRGNVLLSQGQANWT--VGSNSHQLSVDNF 284 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 L+ + D +LN +G Sbjct: 285 VLEGRRQGNGWQID---------APVLNLKTDGQA 310 >gi|330974108|gb|EGH74174.1| hypothetical protein PSYAR_26839 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 355 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 33/337 (9%), Positives = 97/337 (28%), Gaps = 24/337 (7%) Query: 2 LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++R L L L +++ +P + R+ + + + + + + Sbjct: 1 MKRRYSWPLWTLAALVVLLIAVNIALPYLV-----RDYLNDKLADMGDYRGEIT-DVDLA 54 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + + K ++I + + + + + L V P +NF Sbjct: 55 LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTGPQINFV 113 Query: 116 LSSKGVSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 + + + + + L ++ + GRI + S + + S Sbjct: 114 DGGSKQDSQTGQGTDWRTQMNKLLPITLNELRIDDGRITFNNFNSTPKVKIEADQVNASI 173 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230 L + + + +G + + + K++ + Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESTARFDPFSNFEDFDFKLRATGIQLKK 230 Query: 231 IIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 + D ++ V D +L ++ N++ N ++ Sbjct: 231 LNDFSSAYGKFDFNAGDGDVVIEAQADKGQLKGYIKPLLRNVDVFNWQQDVENKDKGVFR 290 Query: 290 --LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 ++++ S T N+ + L+ S + + Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327 >gi|218706859|ref|YP_002414378.1| hypothetical protein ECUMN_3719 [Escherichia coli UMN026] gi|293406848|ref|ZP_06650774.1| hypothetical protein ECGG_02158 [Escherichia coli FVEC1412] gi|298382589|ref|ZP_06992186.1| yhdP protein [Escherichia coli FVEC1302] gi|218433956|emb|CAR14873.1| conserved hypothetical protein; putative membrane protein, putative transporter [Escherichia coli UMN026] gi|291426854|gb|EFE99886.1| hypothetical protein ECGG_02158 [Escherichia coli FVEC1412] gi|298277729|gb|EFI19245.1| yhdP protein [Escherichia coli FVEC1302] Length = 1266 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|218555809|ref|YP_002388722.1| hypothetical protein ECIAI1_3387 [Escherichia coli IAI1] gi|218362577|emb|CAR00201.1| conserved hypothetical protein; putative membrane protein, putative transporter [Escherichia coli IAI1] Length = 1266 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|330900107|gb|EGH31526.1| hypothetical protein PSYJA_22124 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 355 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 32/329 (9%), Positives = 94/329 (28%), Gaps = 20/329 (6%) Query: 6 LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65 L L L +++ +P + R+ + + + + + + + + Sbjct: 9 LWTLAALIVLLIAVNIALPYLV-----RDYLNDKLADMGDYRGEIT-DVDLALWRG-AYR 61 Query: 66 FKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 K ++I + + + + + L V P +NF + Sbjct: 62 IKGLKIVKTDGKVPVPFFDAPMIELAVSWNSLWYDHAVVAKALFTDPQINFVDGGSKQDS 121 Query: 124 WFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 + + + + L ++ + GRI + S + + S L + Sbjct: 122 QTGQGTDWRTQMNKLLPITLNELRIDNGRITFNNFNSKPKVKIEADQVNASIYNLTNVVD 181 Query: 180 LSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPIIIDL-FGN 237 + + +G + + + K++ + + D Sbjct: 182 VEGNRDA---EFKGKARLLGHADLESSARFDPFSNFEDFDFKLRATGIQLKKLNDFSSAY 238 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK--LQSILP 295 ++ V D +L ++ N++ N ++ ++++ Sbjct: 239 GKFDFNAGDGDVVIEAQADKGQLKGYIKPLLRNVDVFNWQQDVENKDKGVFRSIWEALVG 298 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAES 324 S T N+ + L+ S + + Sbjct: 299 TSETVLKNQRENQFATRVDLSGSVHQQDI 327 >gi|289627555|ref|ZP_06460509.1| hypothetical protein PsyrpaN_20902 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646983|ref|ZP_06478326.1| hypothetical protein Psyrpa2_04407 [Pseudomonas syringae pv. aesculi str. 2250] Length = 1271 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 36/284 (12%), Positives = 95/284 (33%), Gaps = 22/284 (7%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A+ +G +++ G ++ F Sbjct: 13 RWGLSLCALVLVLAALYVSLGRQLTPLVAEYRVDVETRASSALGMPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P D+ + + GS +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVFLAHDVMVGE---GSSAVRLDRVRVVPDLWESLLARQVRIAHLEVDGLQFMLRQDKE 128 Query: 120 GVSNWFQRKSTMDMIHNV--ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 G + D + +LE++ + + + Q + Q + + L L Sbjct: 129 GNWSVQGLPVRNDSPFDPGQVLEQMQMVSHLLLLDSQVTVQPFDAAPLTL--------TY 180 Query: 178 SPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIID 233 LS+ + + D + A + + K+ + L + + Sbjct: 181 VNLSLATGSYHQRLDARLTLPDGQPFALNVRSRIQASQWKDGEADVYASLPQSDWARWLP 240 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 W + G ++ + + + G + Sbjct: 241 KSLTREWTLSKLQAGGELWMSWGKGTVQSATARLNAPHVKGVYA 284 >gi|284923261|emb|CBG36355.1| possible exported protein [Escherichia coli 042] Length = 1266 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|213966625|ref|ZP_03394776.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|302063723|ref|ZP_07255264.1| hypothetical protein PsyrptK_27384 [Pseudomonas syringae pv. tomato K40] gi|302133803|ref|ZP_07259793.1| hypothetical protein PsyrptN_20534 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928475|gb|EEB62019.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] Length = 1271 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 93/297 (31%), Gaps = 19/297 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A +G +++ G ++ F Sbjct: 13 RWSLSLCALILVLAALYVSLGRQLTPLVAEYRVDVETRARSALGIPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + D+ + + G+ +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVLLAHDVMVGE---GANALRLDRVRVVPDLWASLLARQVRIAHLEVDGLQFTIKQDQE 128 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 G D + L ++ + ++ D + L+ A Sbjct: 129 GGWAVQGLPLRNDTP--LDLGQL-LNQMQMVSHLSLLDSQVTVQPLDA---APLTLTYVN 182 Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235 LS+ + + D + A + + K+ L + + Sbjct: 183 LSLTTGSYHQRLDARLTLPDGQPFALNVRSRIQASQWKDGEADFYASLPQSDWAKWLPKS 242 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 W + G ++ + + ++ G + I L + Sbjct: 243 ATREWTLSRLQAGGDLWMSWGKGTVQSATARLNAPQIKGVY-ADRKPSTIDNLALNA 298 >gi|257487635|ref|ZP_05641676.1| hypothetical protein PsyrptA_30468 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330894721|gb|EGH27382.1| hypothetical protein PSYMO_40180 [Pseudomonas syringae pv. mori str. 301020] gi|330989370|gb|EGH87473.1| hypothetical protein PLA107_30407 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331013116|gb|EGH93172.1| hypothetical protein PSYTB_26311 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 355 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/337 (9%), Positives = 96/337 (28%), Gaps = 24/337 (7%) Query: 2 LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++R L L L +++ +P + R+ + + + + + + Sbjct: 1 MKRRYSWPLWTLAALVVLLIAINIALPYLV-----RDYLNDKLADMGDYRGEIT-DVDLA 54 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + + K ++I + + + + + L V P +NF Sbjct: 55 LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTGPQINFV 113 Query: 116 LSSKGVSNWFQRKSTM----DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 ++ + + D + + L ++ + GRI + S + + S Sbjct: 114 DGGSKQNSQTGQGTDWRTQMDKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQVNASI 173 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230 L + + + +G + + + K++ + Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESTARFDPFSNFEDFDFKLRATGIQLKK 230 Query: 231 IIDLF---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 + D G +N L + + + + + + R Sbjct: 231 LNDFSSAYGKFDFNAGDGDLVIEAQADKGQLSGYIKPLLRNVDVFNWHQDVENKDKGVFR 290 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 ++++ S T N+ + L+ S + + Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327 >gi|331670068|ref|ZP_08370913.1| conserved hypothetical protein [Escherichia coli TA271] gi|331679319|ref|ZP_08379991.1| conserved hypothetical protein [Escherichia coli H591] gi|332279926|ref|ZP_08392339.1| conserved membrane protein predicted transporter [Shigella sp. D9] gi|331062981|gb|EGI34895.1| conserved hypothetical protein [Escherichia coli TA271] gi|331073384|gb|EGI44707.1| conserved hypothetical protein [Escherichia coli H591] gi|332102278|gb|EGJ05624.1| conserved membrane protein predicted transporter [Shigella sp. D9] Length = 1266 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|66044827|ref|YP_234668.1| hypothetical protein Psyr_1582 [Pseudomonas syringae pv. syringae B728a] gi|63255534|gb|AAY36630.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae B728a] Length = 355 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/337 (9%), Positives = 96/337 (28%), Gaps = 24/337 (7%) Query: 2 LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++R L L L +++ +P + R+ + + + + + + Sbjct: 1 MKRRYSWPLWTLAALVVLLIAVNIALPYLV-----RDYLNDKLADMGDYRGEIT-DVDLA 54 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + + K ++I + + + + + L V P +NF Sbjct: 55 LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTGPQINFV 113 Query: 116 LSSKGVSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 + + + + + L ++ + GRI + S + + S Sbjct: 114 DGGSKQDSQTGQGTDWRTQMNKLLPITLNELRIDDGRITFNNFNSTPKVKIEADQVNASI 173 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230 L + + + +G + + K++ + Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESTARFEPFSNFEDFDFKLRATGIQLKK 230 Query: 231 IIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 + D ++ V D +L ++ N++ N ++ Sbjct: 231 LNDFSSAYGKFDFNAGDGDVVIEAQADKGQLKGYIKPLLRNVDVFNWQQDVENKDKGVFR 290 Query: 290 --LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 ++++ S T N+ + L+ S + + Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327 >gi|285019219|ref|YP_003376930.1| hypothetical protein XALc_2459 [Xanthomonas albilineans GPE PC73] gi|283474437|emb|CBA16938.1| hypothetical predicted membrane protein [Xanthomonas albilineans] Length = 1290 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/329 (10%), Positives = 96/329 (29%), Gaps = 38/329 (11%) Query: 7 IGLGFLFSVVLVGAF--TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64 + +G + ++VGA +PL + + G+ I P + Sbjct: 20 VAIGLVCVALVVGALSQALPLV---QRHPQQVAAWLSARAGQPIRFDRLETAWTRRGPLL 76 Query: 65 FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124 +RI + +I + + ++ + LN + G + Sbjct: 77 RLDGLRIGGGDG----VRIGQAEILVSMYTGMLPGRSFTELRLRGLALNLLRADDGNWSV 132 Query: 125 FQRKSTMDMIHNVI----LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 ++ + L ++ + GGR+ + D + +++++ + Sbjct: 133 QGLPTSGQGGDPLDSLQGLGELQLIGGRLAVSAPSLDVAVQVPKIDMRLRVNGDRLR--- 189 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNLF 239 V + G+ + + + + + ++ + + ++ + G + Sbjct: 190 --------VGVQSWGDMHQPPLTAVLNIDRQRGSGGLYVAVRPMDLSVWSGLLHVAG-IQ 240 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 + L ++ + + RL G ++DG R + ++ + Sbjct: 241 VQGGAGEIQAWLQLQQYRVAGLTVQAALRDLRLRGA-TLADGRTR-PQLLFTTLRTTARW 298 Query: 300 -DEDN---------KTKVSQDEENLLNFS 318 D K ++ Q Sbjct: 299 RQIDGAGGWRLDVPKLQIDQAGLPPQRLD 327 >gi|126173920|ref|YP_001050069.1| hypothetical protein Sbal_1689 [Shewanella baltica OS155] gi|125997125|gb|ABN61200.1| protein of unknown function DUF748 [Shewanella baltica OS155] Length = 1158 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 44/384 (11%), Positives = 106/384 (27%), Gaps = 59/384 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR ++ S V +P I + + ++G+ + + G I+I+ Sbjct: 19 LRVLVYLTAVYLSYVCTLGLILPYAITT-----LAPEKLSALLGRPVTL-GDIRINPF-N 71 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSS-K 119 V + I +K+ + + + F + + + +++I P+ + K Sbjct: 72 FKVEIDQLAIKEKD-EKPFAGLAQVKFEVNFWQSVFNRAAVIENIHIQAPYAHIIRLERK 130 Query: 120 GVSNW-----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 G + + + V+L + + G+ D+ + Sbjct: 131 GKAGFNFDDILQTLNEHSSASTETTPAEASAPVRVLLSQFVLDAGQFNFDDKITHAQVNY 190 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 ++NL++S + A + K Sbjct: 191 PNINLKLSQLDTEYLMS-----------------------ALSASVAPATKANKTEANPT 227 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 + G+ K Y+ S L + +++G+ I+ Sbjct: 228 PNAQSASDTGSGSGSQVMPIKHNHYAIQLSDDHAGEISLQGQFQLFPIKVAGDVHIAKLK 287 Query: 283 V----RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE-----SMHDLNETDF 333 + R + + L + + +V E L + N + + E Sbjct: 288 LTPLWRFIDDQFKPALTDGEISAKTQYQVDLAENGELQITSNNGQFIVEKLNFNDQERSV 347 Query: 334 FEEEEKKNKNDDLKKDDIQYSVNK 357 + + Q +NK Sbjct: 348 VKLPIFALDGISMDLKQQQVHINK 371 >gi|331016673|gb|EGH96729.1| hypothetical protein PLA106_11585 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 1271 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/297 (11%), Positives = 91/297 (30%), Gaps = 19/297 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A+ +G +++ G ++ F Sbjct: 13 RWSLSLCALILVLAALYVSLGRQLAPLVAEYRVDVETRASSALGIPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + D+ + + G+ +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVLLAHDVMVGE---GANALRLDRVRVVPDLWASLLARQVRIAHLEVDGLQFTIKQDQE 128 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 G D + + ++ D + L+ A Sbjct: 129 GGWAVQGLPLRNDTPLDP---GQLLNQMQMVSHLSLLDSQVTVQPLDA---APLTLTYVN 182 Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235 LS+ + + D + A + + K+ L + + Sbjct: 183 LSLTTGSYHQRLDARLTLPDGQPFALNVRSRIQASQWKDGEADFYASLPQSDWAKWLPKS 242 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 W + G ++ + + ++ G + I L + Sbjct: 243 ATREWTLSRLQAGGDLWMSWGKGTVQSATARLNAPQIKGVY-ADRKPCTIDNLALNA 298 >gi|163856278|ref|YP_001630577.1| hypothetical protein Bpet1968 [Bordetella petrii DSM 12804] gi|163260006|emb|CAP42307.1| conserved hypothetical protein [Bordetella petrii] Length = 1233 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 26/312 (8%), Positives = 79/312 (25%), Gaps = 26/312 (8%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKI 83 + + +R E A+ +G ++ + G ++ P + + I ++ + Sbjct: 61 VLPNIDQWRPRIEAYASEALGARVEI-GRLQADWRGLNPRLKLTALSIYDQQP-EPVLTL 118 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI--------- 134 +S + +L + + ID P L + G + ++ Sbjct: 119 PSVSAVLGWRSVLLLSPSLLSLRIDGPELRVRRDAGGRLWVAGQSIDLNAPHDAGRSSRL 178 Query: 135 --HNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNIISPLSID---SIKGS 188 + + + D+ L +++L++ L LS + ++ Sbjct: 179 VQWLGSQRDLALANATVHWNDEYRQAPEVTLRNVSLRLYNGALAHRFALSAEPPPALARE 238 Query: 189 VIAEGTGNFDNKRSAFKITANFPAKN----KAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 + G + + + + + L L E+ Sbjct: 239 LSLRGRFTRNPLLTGRQRWTGELYAEVDDAEPSAWAPWLAVPRIAGRAATRAWLTL-EQG 297 Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK---LQSILPNSSTDE 301 + A + + ++ + ++ L + Sbjct: 298 AVTDVTADAALRDVRWQAAGDATAIGLAGATLRVQGAPGDVVQFADVPLARGEDGAGMAL 357 Query: 302 DNKTKVSQDEEN 313 + Sbjct: 358 RGELTGLSANLP 369 >gi|157157619|ref|YP_001464718.1| hypothetical protein EcE24377A_3728 [Escherichia coli E24377A] gi|191168183|ref|ZP_03029979.1| conserved hypothetical protein [Escherichia coli B7A] gi|209920716|ref|YP_002294800.1| hypothetical protein ECSE_3525 [Escherichia coli SE11] gi|307314996|ref|ZP_07594584.1| putative transporter [Escherichia coli W] gi|157079649|gb|ABV19357.1| conserved hypothetical protein TIGR02099 [Escherichia coli E24377A] gi|190901791|gb|EDV61544.1| conserved hypothetical protein [Escherichia coli B7A] gi|209913975|dbj|BAG79049.1| conserved hypothetical protein [Escherichia coli SE11] gi|306905579|gb|EFN36111.1| putative transporter [Escherichia coli W] gi|315062545|gb|ADT76872.1| conserved membrane protein, predicted transporter [Escherichia coli W] gi|323376867|gb|ADX49135.1| hypothetical protein EKO11_0479 [Escherichia coli KO11] Length = 1266 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|82545525|ref|YP_409472.1| hypothetical protein SBO_3142 [Shigella boydii Sb227] gi|81246936|gb|ABB67644.1| Uncharacterized membrane protein [Shigella boydii Sb227] Length = 1266 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|298488477|ref|ZP_07006508.1| Possible exported protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157102|gb|EFH98191.1| Possible exported protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 1271 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 30/287 (10%), Positives = 87/287 (30%), Gaps = 28/287 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A+ +G +++ G ++ F Sbjct: 13 RWGLSLCALVLVLAALYVSLGRQLTPLVAEYRVDVETRASSALGMPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P D+ + + GS +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVFLAHDVMVGE---GSSAVRLDRVRVVPDLWESLLARQVRIAHLEVDGLQFMLRQDKE 128 Query: 120 GVSNWFQRKSTMDMIHNVI--------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 G + D + + + + ++ + L+ +NL ++ Sbjct: 129 GNWSVQGLPVRNDSPFDPGQVLEQMQMVSHLSLLDSQVTV-QPFDAAPLTLTYVNLSLAT 187 Query: 172 RFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + + G + K+ + L + Sbjct: 188 GSYHQRLDARLTLPDGQPFALNVRSRIQASQ----------WKDGEADVYASLPQSDWAR 237 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 + W + G ++ + + + G + Sbjct: 238 WLPKSLTREWTLSKLQAGGELWMSWGKGTVQSATARLNAPHVKGVYA 284 >gi|146305896|ref|YP_001186361.1| membrane protein-like protein [Pseudomonas mendocina ymp] gi|145574097|gb|ABP83629.1| membrane protein-like protein [Pseudomonas mendocina ymp] Length = 1273 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 35/275 (12%), Positives = 86/275 (31%), Gaps = 33/275 (12%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 +R + E A+ +G + + G ++ P + D++I ++ G ++ + + Sbjct: 43 YRLEAEDHASEALGVPVRI-GRLEGRWQGFAPVLVAHDVQIGAQDQG---LGLDRVQLLP 98 Query: 91 E-FLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI--------LEK 141 + LL+ + R+ + D LN ++G + +V + + Sbjct: 99 DMLGSLLARQPRIAHLQFDGLQLNLQEDAEGAWHLQGWPERDGPDADVQQVLEQLRIVRR 158 Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNK 200 I + RI + + LS +NL + + S +G D + Sbjct: 159 ISLFDSRIVL-QPRDQEPLLLSYVNLSLGY-------------GRNSQRLDGRLLLPDGQ 204 Query: 201 RSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257 A ++ + L + L + + W+ ++ G + Sbjct: 205 PLALRLRTRMQPQSWREAEAELYLSLPQSDWAAWLPQRLTGDWHLERLQAGGELWLKARG 264 Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 L L ++ G + + + Sbjct: 265 LALQQGALRLHAPQVVGA-HGEQEPITLDDLAFNA 298 >gi|323173497|gb|EFZ59126.1| hypothetical protein ECLT68_1812 [Escherichia coli LT-68] Length = 1266 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|269958274|ref|YP_003328061.1| hypothetical protein ACIS_00024 [Anaplasma centrale str. Israel] gi|269848103|gb|ACZ48747.1| hypothetical protein ACIS_00024 [Anaplasma centrale str. Israel] Length = 905 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 46/334 (13%), Positives = 100/334 (29%), Gaps = 30/334 (8%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKK---IAVKGGIKIHIL 59 + L L VV VP +DW + E +Q G + G I+ +L Sbjct: 10 KFLGRLCCCVLVVFAALAFVPYLVDWNAHYGEYVFKQLGAATGSSGAVVKAIGNIEGSLL 69 Query: 60 PFPSVFFKDIRI---DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 P + +++ + + + I+ + + + L +L GE +V + + Sbjct: 70 -LPKLTVRNLYVECSEDAAGCAGTLSIDRMELSVDPLSILMGEPKVRTISLYG----LRT 124 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 S G+ ++ + H I + V GG + + V+ S I + + Sbjct: 125 SVGGLVGMVGSQTKSGLGHVRIFDSAVVTGGVVGASASAYNTVHVKS---ATIKSSGSAL 181 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP--LAYPIIIDL 234 + + S K+ + P + +S + ++ Sbjct: 182 FGDAVLKIGGTKYLLSSKLERSAAGSTVKVELHSPNTSMVLSGNGAGQGLFDDFGARFEV 241 Query: 235 FG-NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 NL + + + G + + LSA G+ + ++S Sbjct: 242 KTENLSELAQTVAVVTNYRLLGSVASAEEMVLSAGIKAAKGS------GFEVKDLTMKSK 295 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 +++ S N + D Sbjct: 296 S------ISGTLELACTYAPFCTTSLNFSSIDLD 323 >gi|91790484|ref|YP_551436.1| hypothetical protein Bpro_4655 [Polaromonas sp. JS666] gi|91699709|gb|ABE46538.1| conserved hypothetical protein [Polaromonas sp. JS666] Length = 1441 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 35/315 (11%), Positives = 84/315 (26%), Gaps = 29/315 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILP 60 R L + + + + + +I +FR E +A+ +G + + Sbjct: 47 RFSLWLVASAWLLFGLSWLVLHGWIVPRIGEFRPRLELEASKALGVPVRIGQITAHSQGM 106 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 PS + + + + ++ L LL + +YID+P L ++ G Sbjct: 107 IPSFELQGVALLDAQG-REALRLPRLLGTLSPTSLL--GLGFEQLYIDKPELEILRTADG 163 Query: 121 VSNWFQRKSTMDMI--------HNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISA 171 + D + ++GG ++ D+ L+ ++ + Sbjct: 164 KIYVGGLDVSRDQTAGNRAMADWFFSQTEFVIRGGTVRWTDELRQAPPLALTQVDWVMKN 223 Query: 172 RFLNIISPLSIDSIKGS---VIAEGTGN---FDNKRSAFKITANFPAKNKA----ISLKI 221 + L G G F A +K Sbjct: 224 ARHRHLMRLDATPPAGWGDRFTLRGIFRQSLLSRDAGDFSAWAGQLYAESGRVDLSRIKQ 283 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK----KSRLSGNFK 277 + + + G+ + G + L +++ Sbjct: 284 YAGLESIGLDLT-RGHGALRAWAEVSKGQITGGTADVALQDVDARLGRKLEPLAFDSVAG 342 Query: 278 ISDGNVRISRYKLQS 292 G R++ + + Sbjct: 343 RFGGRQRVNGFDFNT 357 >gi|227887960|ref|ZP_04005765.1| membrane protein [Escherichia coli 83972] gi|227835356|gb|EEJ45822.1| membrane protein [Escherichia coli 83972] Length = 1263 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G N S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|300991030|ref|ZP_07179451.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 45-1] gi|301047911|ref|ZP_07194958.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 185-1] gi|300300254|gb|EFJ56639.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 185-1] gi|300406951|gb|EFJ90489.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 45-1] gi|315294785|gb|EFU54128.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 153-1] Length = 1263 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G N S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|289628926|ref|ZP_06461880.1| hypothetical protein PsyrpaN_27941 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651092|ref|ZP_06482435.1| hypothetical protein Psyrpa2_25644 [Pseudomonas syringae pv. aesculi str. 2250] gi|298486149|ref|ZP_07004212.1| hypothetical protein PSA3335_1575 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159156|gb|EFI00214.1| hypothetical protein PSA3335_1575 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330868076|gb|EGH02785.1| hypothetical protein PSYAE_12663 [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 355 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/337 (10%), Positives = 99/337 (29%), Gaps = 24/337 (7%) Query: 2 LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++R L L L +++ +P + R+ + + + + + + Sbjct: 1 MKRRYSWPLWTLAALVVLLIAINIALPYLV-----RDYLNDKLADMGDYRGEIT-DVDLA 54 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + + K ++I + + + + + L V P +NF Sbjct: 55 LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTDPQINFV 113 Query: 116 LSSKGVSNWFQRKSTM----DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 ++ + + D + + L ++ + GRI + S + + S Sbjct: 114 DGGSKQNSQTGQGTDWRTQMDKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQVNASI 173 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230 L + + + +G + + + K++ + Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESTARFDPFSNFEDFDFKLRATGIQLKK 230 Query: 231 IIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 + D ++ V D +L ++ N++ N ++ Sbjct: 231 LNDFSSAYGKFDFNAGDGDVVIEAQADKGQLKGYIKPLLRNVDVFNWQQDVENKDKGVFR 290 Query: 290 --LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 ++++ S T N+ + L+ S + + Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327 >gi|187731278|ref|YP_001881636.1| hypothetical protein SbBS512_E3277 [Shigella boydii CDC 3083-94] gi|187428270|gb|ACD07544.1| conserved hypothetical protein [Shigella boydii CDC 3083-94] Length = 1266 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G N S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|170766061|ref|ZP_02900872.1| conserved hypothetical protein [Escherichia albertii TW07627] gi|170125207|gb|EDS94138.1| conserved hypothetical protein [Escherichia albertii TW07627] Length = 1266 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 92/323 (28%), Gaps = 34/323 (10%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIEDATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYI--DQ 109 + P++ +DIR + K+ G ++ +++ + LL + D+ + Sbjct: 57 LSASWQNFGPTLEARDIRAELKDGGE--FSVKRVTLALDIWQSLLHMRWQFRDLTFWQLR 114 Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDL 165 N +SS G N + + + ++ + + + LS L Sbjct: 115 FRTNTPISSSG-GNDSLEAGHISNLFLHQFDHFDLRDSEVSFLTPSGQRAELAIPQLSWL 173 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQ 222 N R +S S+ G + D S ++ + L IQ Sbjct: 174 NNPRRHRAEGQVSLSSLTGQHGVMQVRMDLRDDEGVLSDGRVWLQADNIDLKPWLGKWIQ 233 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281 L G + ++ G S L+ + Sbjct: 234 DNIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHSLSVDNLTAHITREHP 293 Query: 282 NVRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 294 GWQFS-------IPDTRITMDGK 309 >gi|330968125|gb|EGH68385.1| hypothetical protein PSYAC_26511 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 356 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/341 (9%), Positives = 98/341 (28%), Gaps = 31/341 (9%) Query: 2 LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++R L L L +++ +P + R+ + + + + + + Sbjct: 1 MKRRYSWPLWTLAALVVLLIAINIALPYVV-----RDYLNDKLADMGEYRGELT-DVDLA 54 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + + K ++I + + + + + L V P +NF Sbjct: 55 LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTNPQINFV 113 Query: 116 LSSKGVSNWFQRKSTMDMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 G +N ++ + L ++ + GRI + S + + Sbjct: 114 ---DGGNNKQASQTGQGTDWRTQMNKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQV 170 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPL 226 S L + + + +G + + + +++ + Sbjct: 171 NASFYNLTNVVDVEGNRDA---EFKGKARLLGHADLESTARFDPFSNFEDFDFRLRATGI 227 Query: 227 AYPIIIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 + D ++ V + +L ++ N++ N Sbjct: 228 QLKKLNDFSSAYAKFDFNAGDGDIVIEAQANKGQLSGYIKPLLRNVDVFNWQQDVQNKDK 287 Query: 286 SRYK--LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 ++ ++++ S T N+ + L+ S + + Sbjct: 288 GVFRSIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 328 >gi|323966424|gb|EGB61858.1| adhesin HecA family protein [Escherichia coli M863] Length = 1263 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 36/319 (11%), Positives = 87/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISAR 172 + G N S + + + ++ + + + + L R Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 173 FLNIISPLSIDSIKGS---VIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 +S+ S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGQVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|324009062|gb|EGB78281.1| hypothetical protein HMPREF9532_01181 [Escherichia coli MS 57-2] Length = 1263 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G N S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|331659525|ref|ZP_08360467.1| conserved hypothetical protein [Escherichia coli TA206] gi|315300896|gb|EFU60116.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 16-3] gi|331054107|gb|EGI26136.1| conserved hypothetical protein [Escherichia coli TA206] Length = 1263 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G N S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|218247460|ref|YP_002372831.1| hypothetical protein PCC8801_2674 [Cyanothece sp. PCC 8801] gi|218167938|gb|ACK66675.1| protein of unknown function DUF490 [Cyanothece sp. PCC 8801] Length = 1975 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 41/381 (10%), Positives = 106/381 (27%), Gaps = 17/381 (4%) Query: 1 MLRRVL----IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 +LRR+ I +G V++ +T E Q + I+ + I + Sbjct: 18 LLRRLTHPATIAIGVGSVTVVLIGYTGLRLFLKEYLPPWLETQVSYIINRPIKIGELQDF 77 Query: 57 HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + + I D + I ++++ L ++ + + ++ + Sbjct: 78 SL---TGLSLGSTSIPVTPDNPNQITISKINVKFNPLAVVFRRTLPITISPQKVDVDVFQ 134 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 +++G + + + + K+ + ++ + Sbjct: 135 NAQGQLLTIDVEESKLPVKLDLTFKVEKADINVFPYQKKQPLEVQFKGEARYLEEDVAKW 194 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 L++ + V +G S K+ + S I + Sbjct: 195 QYDLNLALLNSQVKLQGETICSTTESNIKLNVEKLDFSSLTSFIIDFPLRLNSGNVQANL 254 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS--GNFKISDGNVRISRYKLQSIL 294 N+ + G + L ++ N + V + +L Sbjct: 255 NIQSP-SLKEFQGTQAQGNVNLSNLQGQVKPLTKPFEVLSNISFKNNKVLVKNARLTIGQ 313 Query: 295 PNSSTDEDNKTKVSQDEENLLNFS-ENGAESMHDLNETDFFEEEEKKNKNDDLK----KD 349 + + + ++N G L + + E + + N L K Sbjct: 314 ITAK--LGGEYDWNTGSNLVVNLEGLTGKNLRQVLPPSFPLQVEGELDANFKLTGQLNKP 371 Query: 350 DIQYSVNKKEEKDNSHDKENQ 370 ++ +N K+ K +Q Sbjct: 372 LLKGKINNKKAVTVLKTKFDQ 392 >gi|254456311|ref|ZP_05069740.1| conserved hypothetical protein [Candidatus Pelagibacter sp. HTCC7211] gi|207083313|gb|EDZ60739.1| conserved hypothetical protein [Candidatus Pelagibacter sp. HTCC7211] Length = 500 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 116/349 (33%), Gaps = 27/349 (7%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 +R+ G + VV+ ++P F + + + Q + + A+ + P P Sbjct: 45 KRIF-GFISVLLVVVFSYLSLPYFYNTNNLVNKIKNQLSKNLNFNFAINNDFTYNFFPKP 103 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + FK+ + +D + +E + + L S + ++ ID + + ++ Sbjct: 104 NFVFKETKFY--DDKKNFADVERIKIYISPKYLFS----LDNIKIDD--VILNNVNFNLN 155 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 N T + +N + +I + ++D ++ S L+ + + L Sbjct: 156 NKNYNFFTKLLNNNFSNFNFEINDSKIFYRNIDNDVLFINSVNQLKYYFDLKDQKNTLLA 215 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242 + ++ D NF N + + I N +E Sbjct: 216 NCEIFNLPYTIELKDDINEKKIISKLNFEFLNLKVINEYSKKNSNKKGSIKFIHNKNISE 275 Query: 243 K-----QPIYSGVFSVAGDFSKLLN----------LELSAKKSRLSGNFKISDGNVRISR 287 + +++ + S E+S ++++ N ++ ++ + Sbjct: 276 GKYEIEKNLFNFNYLDKSLDSNFKYEGMINFIPFFSEISGDVNKINLNQVLNSDSILVQL 335 Query: 288 YKLQSI---LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 +K + + N T K ++ L + E + D+N T F Sbjct: 336 FKTELLNNKNLNIDTIIKAKKIAPYNDLINLVLNLKIEEGLVDINNTKF 384 >gi|94264797|ref|ZP_01288574.1| hypothetical protein MldDRAFT_5021 [delta proteobacterium MLMS-1] gi|93454736|gb|EAT04994.1| hypothetical protein MldDRAFT_5021 [delta proteobacterium MLMS-1] Length = 1253 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 88/311 (28%), Gaps = 27/311 (8%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89 R+ QA +G+ + V+ +++ P P + I + ++ L Sbjct: 30 DYARQQVASQAEAQLGQPVGVE-SLEVAWYPLPHLLLVGIAAEDHGWS---LQMPRLEFH 85 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149 + L G + + + + P L+ + + ++ +K GR+ Sbjct: 86 PRWRTLWRGRLEIGQIVLQDPTLSLDPDA-------FAIPEPKSLVLPTTGELLLKNGRL 138 Query: 150 KII----------DQESDQVYFLSDLNLQISARFLNIISPLSID-SIKGSVIAEGTGNFD 198 +++ + LS +N ++ A + L+ S + G + Sbjct: 139 EVVGYSGGLLGLDLGLELAPWQLSAINGRLRAESSRLELELTTTPSFGNELRLAGWLTPE 198 Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF---WNEKQPIYSGVFSVAG 255 T ++ + I +L + +G Sbjct: 199 GGH-QLSATGRGLEFDQLLRGAAHGRIATLETIANLELTSQGQAVDHFTATINGEMPCLL 257 Query: 256 DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT-KVSQDEENL 314 + + +RL + +D +RI +++ S + + E Sbjct: 258 LEPEQDRVRFDCGLARLELQRRGADFKLRIHELEIREPELALSGLVSRRLPPAEDNAEPH 317 Query: 315 LNFSENGAESM 325 G + Sbjct: 318 WEIELAGRDLD 328 >gi|300979742|ref|ZP_07174692.1| hypothetical protein HMPREF9553_01450 [Escherichia coli MS 200-1] gi|300307960|gb|EFJ62480.1| hypothetical protein HMPREF9553_01450 [Escherichia coli MS 200-1] gi|324015840|gb|EGB85059.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 60-1] Length = 1263 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G N S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|83858485|ref|ZP_00952007.1| hypothetical protein OA2633_03261 [Oceanicaulis alexandrii HTCC2633] gi|83853308|gb|EAP91160.1| hypothetical protein OA2633_03261 [Oceanicaulis alexandrii HTCC2633] Length = 1151 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 42/334 (12%), Positives = 81/334 (24%), Gaps = 32/334 (9%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILP---FPSVFFKDIRIDQKEDGSFESKI 83 ++ R V A G +++ P V +D+ I + DG Sbjct: 39 VNAEMIRPAVTEILLEAVKGDAAAIGDLELSFDPAYAALVVTARDVSIS-RADGDTIIAS 97 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN-------------------W 124 E + LL+G + + L Y G Sbjct: 98 ERIEAGVALDLLLAGRVAPVSLEARGGTLWLYRDELGRLTGGLGALEDRFGAAQESEDAA 157 Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD----LNLQISARFLNIISPL 180 L ++ V +++ D+ D + L L A L L Sbjct: 158 PDFNMDRASRVFARLLRVDVSNVSLQVRDEYHDWTGLFTGMGGALELSDGALSLRAEGAL 217 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI---QLFPLAYPIIIDLFGN 237 + + + + A L+ L L P + L + Sbjct: 218 VTSAGLAPITLDVQSGRSLESVFVDAALTDLVPAAAAPLQGPFTGLSALDAPFDMHLVFD 277 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297 S + + + +R+ + + G + + + S L Sbjct: 278 ASREAGLRQASLQMEADTGVIRSAGRQTDIRAARIDASLDVEAGRLDLHELSVDSDLLTL 337 Query: 298 STDEDN-KTKVSQDEENLLNF-SENGAESMHDLN 329 S + D N + DL+ Sbjct: 338 SLNGALHDFTAYDDAIPARALYELNAGQGRLDLS 371 >gi|296134610|ref|YP_003641852.1| hypothetical protein Tint_0109 [Thiomonas intermedia K12] gi|295794732|gb|ADG29522.1| conserved hypothetical protein [Thiomonas intermedia K12] Length = 1461 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 33/289 (11%), Positives = 73/289 (25%), Gaps = 27/289 (9%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWT--DFREDFERQATLIVGKKIAVKGGIKIHI-LPF 61 VL+ L F + G T+ + FR E+ ++ +G + + G I+ Sbjct: 19 VLLVLTVYFVLG-AGLLTLRYAVLPNAQQFRPWVEQVSSQALGLPVHI-GAIQTQWHGLM 76 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P D+RID + + + + L + I L Sbjct: 77 PQFALHDVRIDGPQG-QPALQFAAVEATPSWKSLTRLTPTFDQLVIRGADLTVTRPDANH 135 Query: 122 SNW-----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD----QVYFLSDLN 166 + ++I + R+ + + ++ L Sbjct: 136 LAIGGIRIALNSSGQSDAAQQFADWLFEQDEILILDSRLTWENAAQHAPPLPLTQVNLLL 195 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL---KIQL 223 ++ G + + + + TA+F + + L Sbjct: 196 RNTLLTHRAALTATPPAGFGGPIDLRASFR---QPFFLRHTADFSRWKGTLYGEVPDVDL 252 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 L + + L + +L L +L Sbjct: 253 AALQPQLPLTLPATTQTGRGSVRAWAQIDDGAPTAFTADLALRGIALQL 301 >gi|213620471|ref|ZP_03373297.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 73 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 28/71 (39%) Query: 39 QATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG 98 Q ++ + G ++ H+ P S+ + + + + + + + PLLS Sbjct: 1 QVAARSEYQLQLDGPLRWHVWPQLSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSH 60 Query: 99 EIRVFDMYIDQ 109 ++ V + + Sbjct: 61 QLHVKQVMLKG 71 >gi|120555634|ref|YP_959985.1| membrane protein-like [Marinobacter aquaeolei VT8] gi|120325483|gb|ABM19798.1| membrane protein-like protein [Marinobacter aquaeolei VT8] Length = 1236 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 38/308 (12%), Positives = 86/308 (27%), Gaps = 21/308 (6%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFF 66 L L L L D F ++ + G ++V G + PS+ Sbjct: 34 ILTLLVLFALYVGVGRQLTSDINSFSDELAASLSEATGLDVSV-GSLSSQWYWLDPSITA 92 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 KDI I+ + +++E L +R +F L + + D L + Sbjct: 93 KDITINSPDSDRIAAELEHLELRLDFFASLFRFRLVFRNFDADGLALTVVRPTDDPFINP 152 Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIID--------QESDQVYFLSDLNLQIS 170 ++ + L + +++ +++ + + L+L Sbjct: 153 VEEIVELAEPGAPELQEWIRLAGRWLSDPEVRVTRVSLALGPSRQNLRFLDIPQLDLYYQ 212 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + + R F + + + I Sbjct: 213 GGLFQAAGRAMQSGTTTQLASFALVGQRFFRGEFTGQLYLDVDSGRLFDGLIDDLNWRGI 272 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRISRY 288 ++ F +L + G + L+L + L+ + + G R Sbjct: 273 RVEGF-DLGGSAWLSFEDGELQQVQGQVRTPYLQLGVNRESLAPLEDIQAHFGWRRGEAL 331 Query: 289 KLQSILPN 296 +LQ + + Sbjct: 332 RLQKLRWD 339 >gi|330877205|gb|EGH11354.1| hypothetical protein PSYMP_17091 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 1271 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 34/297 (11%), Positives = 91/297 (30%), Gaps = 19/297 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A+ +G +++ G ++ F Sbjct: 13 RWGLSLCALILVLAALYVSLGRQLTPLVAEYRVDVETRASSALGIPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + D+ + + G+ +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVLLAHDVMVGE---GANALRLDRVRVVPDLWASLLARQVRIAHLEVDGLQFTIKQDQE 128 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 G D + + ++ D + L+ A Sbjct: 129 GGWAVQGLPVRNDTPFDP---GQLLNQMQMVSHLSLLDSQVTVQPLDA---APLTLTYVN 182 Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235 LS+ + + D + A + + K+ L + + Sbjct: 183 LSLTTGSYHQRLDARLTLPDGQPFALNVRSRIQASQWKDGEADAYASLPQSDWAKWLPKS 242 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 W + G ++ + + ++ G + I L + Sbjct: 243 LTREWTLSRLQAGGDLWMSWGKGTVQSATARLNAPQIKGVY-ADRKPSTIDNLALNA 298 >gi|307625162|gb|ADN69466.1| hypothetical protein UM146_00185 [Escherichia coli UM146] gi|315289059|gb|EFU48457.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 110-3] gi|323957614|gb|EGB53328.1| adhesin HecA family protein [Escherichia coli H263] Length = 1263 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G N S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|331684886|ref|ZP_08385478.1| conserved hypothetical protein [Escherichia coli H299] gi|331078501|gb|EGI49707.1| conserved hypothetical protein [Escherichia coli H299] Length = 1263 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G N S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|154148646|ref|YP_001406906.1| hypothetical protein CHAB381_1357 [Campylobacter hominis ATCC BAA-381] gi|153804655|gb|ABS51662.1| conserved hypothetical protein [Campylobacter hominis ATCC BAA-381] Length = 1025 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 51/395 (12%), Positives = 119/395 (30%), Gaps = 43/395 (10%) Query: 2 LRRVLIGLGF---LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58 ++++L L ++ F + + + + K+++ Sbjct: 1 MKKILKFFADKKRLCVLIFAVFFLIYTIFGFFGIPYIITKILPSKMPNKVSLNIQ-NAKF 59 Query: 59 LPFPS-VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 PF + ++ + K + + +F + + ++ P ++ Sbjct: 60 NPFTYELNITNLDLRT---QIPLFKAKKIDADIKFTDFFKKNLNFEILTLESPQISIAKD 116 Query: 118 SKGVSNWFQR---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF--LSDLN 166 G N+ + N+IL+ + +K G IK D + + + ++N Sbjct: 117 KNGNFNFASLLENNKTENNNEEKNSGVNLILKYLKIKNGTIKYADNSLKEPFVAAIDNIN 176 Query: 167 LQISARFLNIISPLS-----IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN------- 214 +++ L + SI +V E + + + KI N Sbjct: 177 YELTDFDLKQNIGGNHRFGGDSSIMENVNIESKVDLNPFKIYGKIDIKNLNINPFWLSFV 236 Query: 215 -KAISLKIQLFPLAYPIIIDLFGNLFW---NEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270 +LK + + + + + I S+ + S+ N + A K+ Sbjct: 237 PDNTNLKNGIINSNLLYFLKFDNEIKFYLKDSNLSISDFSLSLDKNSSEHANFKELALKN 296 Query: 271 -------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 + L + N + N V + EN NF+ + Sbjct: 297 FNIHLLYDKDIKTDAKLEKFYLQDANLSAFNYNLNFKNLNSDNVKFNMENQ-NFNVKIPQ 355 Query: 324 SMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358 + + DF +++ DLK +I N Sbjct: 356 ILAQTTKLDFKKKDFFALSKIDLKDINISKENNTT 390 >gi|330963996|gb|EGH64256.1| hypothetical protein PSYAC_05010 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 1271 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 92/297 (30%), Gaps = 19/297 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 R + L L V+ ++ + ++R D E +A+ +G +++ G ++ F Sbjct: 13 RWGLSLCALILVLAALYVSLGRQLTPLVAEYRVDVETRASSALGIPLSI-GSLEGSWSRF 71 Query: 62 -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + D+ + + GS +++ + + + LL+ ++R+ + +D + Sbjct: 72 APVLLAHDVMVGE---GSSALRLDRVRVVPDLWASLLARQVRIAHLEVDGLQFTIKQDQE 128 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 G D + + + ++ D + L+ A Sbjct: 129 GGWAVQGLPVRNDTPFDP---RQVLNQMQMVSHLSLLDSQVTVQPLDA---APLTLTYVN 182 Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235 LS+ + + D + A + + K+ L + + Sbjct: 183 LSLTTGSYHQRLDARLTLPDGQPFALNVRSRIQASQWKDGEADAYASLPQSDWAKWLPKS 242 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 W + G ++ + + ++ G + I L + Sbjct: 243 LTREWTLSRLQAGGDLWMSWGKGTVQSATARLNAPQIKGVY-ADRKPSTIDNLALNA 298 >gi|330879573|gb|EGH13722.1| hypothetical protein PSYMP_25345 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 356 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 34/341 (9%), Positives = 98/341 (28%), Gaps = 31/341 (9%) Query: 2 LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++R L L L +++ +P + R+ + + + V + + Sbjct: 1 MKRRYSWPLWTLAALVVLLIAINIALPYVV-----RDYLNDKLADMGEYRGEVT-DVDLA 54 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + + K ++I + + + + + L V P +NF Sbjct: 55 LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTNPQINFV 113 Query: 116 LSSKGVSNWFQRKSTMDMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 G +N ++ + L ++ + GRI + S + + Sbjct: 114 ---DGGNNKQASQTGQGTDWRTQMNKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQV 170 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPL 226 S L + + + +G + + + +++ + Sbjct: 171 NASFYNLTNVVDVEGNRDA---EFKGKACLLGHADLESTARFDPFSNFEDFDFRLRATGI 227 Query: 227 AYPIIIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 + D ++ V + +L ++ N++ N Sbjct: 228 QLKKLNDFSSAYAKFDFNAGDGDLVIEAQANKGQLSGYIKPLLRNVDVFNWQQDVQNKDK 287 Query: 286 SRYK--LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 ++ ++++ S T N+ + L+ S + + Sbjct: 288 GVFRSIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 328 >gi|28871055|ref|NP_793674.1| hypothetical protein PSPTO_3903 [Pseudomonas syringae pv. tomato str. DC3000] gi|28854305|gb|AAO57369.1| conserved protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] Length = 356 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 34/341 (9%), Positives = 98/341 (28%), Gaps = 31/341 (9%) Query: 2 LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 ++R L L L +++ +P + R+ + + + V + + Sbjct: 1 MKRRYSWPLWTLAALVVLLIAINIALPYVV-----RDYLNDKLADMGEYRGEVT-DVDLA 54 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + + K ++I + + + + + L V P +NF Sbjct: 55 LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTNPQINFV 113 Query: 116 LSSKGVSNWFQRKSTMDMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 G +N ++ + L ++ + GRI + S + + Sbjct: 114 ---DGGNNKQASQTGQGTDWRTQMNKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQV 170 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPL 226 S L + + + +G + + + +++ + Sbjct: 171 NASFYNLTNVVNVEGNRDA---EFKGKARLLGHADLESTARFDPFSNFEDFDFRLRATGI 227 Query: 227 AYPIIIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 + D ++ V + +L ++ N++ N Sbjct: 228 QLKKLNDFSSAYAKFDFNAGDGDVVIEAQANKGQLSGYIKPLLRNVDVFNWQQDVQNKDK 287 Query: 286 SRYK--LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 ++ ++++ S T N+ + L+ S + + Sbjct: 288 GVFRSIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 328 >gi|217973830|ref|YP_002358581.1| hypothetical protein Sbal223_2668 [Shewanella baltica OS223] gi|217498965|gb|ACK47158.1| protein of unknown function DUF748 [Shewanella baltica OS223] Length = 1151 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 46/380 (12%), Positives = 111/380 (29%), Gaps = 53/380 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR + S V +P I + + ++G+ + + G I+I+ Sbjct: 19 LRVLAYLTAVYLSYVCTLGLILPYAITT-----LAPEKLSALLGRPVTL-GDIRINPF-N 71 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL-SSK 119 V + I +K+ + + + F + + + +++I P+ + K Sbjct: 72 FKVAIDQLAIKEKD-EKPFAGLAQVQFEVNFWQSVFNRAAVIENIHIQAPYAHIIRVQKK 130 Query: 120 GVSNW-----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 G + + + V+L + + G+ D+ + Sbjct: 131 GKAGFNFDDILQTLNEHSSASTETTPAETSAPVRVLLSQFVLDAGQFNFDDKITHAQVNY 190 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 ++NL++S + + ++ SV N + + + + IQ Sbjct: 191 PNINLKLSQLD----TEYLMSALSASVAPATKANKTEANPTPNAQSASDTGSGSQVMPIQ 246 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 + D G + G F + ++ K +L+ ++ D Sbjct: 247 HNHYVIQLSDDHAGEIS-------SQGQFQLFPLKIAG---DVHIAKLKLTPLWRFIDDQ 296 Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE-----SMHDLNETDFFEEE 337 + L + + +V E L + N + + E + Sbjct: 297 -------FKPALTDGQITAKTQYQVDLAENGELQVTSNNGQFIVEKLNFNDQERSVVKLP 349 Query: 338 EKKNKNDDLKKDDIQYSVNK 357 + Q +NK Sbjct: 350 IFALDGISMDLKQQQVHINK 369 >gi|294637785|ref|ZP_06716059.1| paral putative protease [Edwardsiella tarda ATCC 23685] gi|291089077|gb|EFE21638.1| paral putative protease [Edwardsiella tarda ATCC 23685] Length = 1264 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 36/334 (10%), Positives = 95/334 (28%), Gaps = 37/334 (11%) Query: 2 LRRV----LIGLGFLFSVVLVGAFTVPLFID-WTDFREDFERQATLIVGKKIAVKGGIKI 56 +RR+ L+ L L +V + + L + R Q + + G + G ++ Sbjct: 1 MRRLPGYLLVTLATLIVLVALLVSGLRLLLPHLDRVRPQIAEQLSELTGTSATI-GTLQA 59 Query: 57 HILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNF 114 F P++ +D+ + K+ +++ + L ++ D+ Q Sbjct: 60 SWQSFGPTLEVRDLAMSGGAGQ---LKVRRVTLALDVWQSLLHARLQFRDLTFYQLQAAT 116 Query: 115 YL-SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISAR 172 ++ + + I + ++ R+ Q + L S Sbjct: 117 DRPLAREQGGGGLQGDELSDIFLRQFDHFTLRDSRLSFPSPSGTQLQLTIPQLTWLNSPD 176 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS---LKIQLFPLAYP 229 +S + + ++ + KN +S L +Q + Sbjct: 177 RHRAEGEVSFTTP------------QGQHGTLQVRMDLRDKNGLLSDGELYLQAQQIDLT 224 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 + + N +S + ++ ++ + + + + Sbjct: 225 PWLSRWVNRNTGVSGADFSLDAWLTIHKGEMQAAQIRLRDGQADWQASGQRHRLTVDDLT 284 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 L++ D LN + +G Sbjct: 285 LRAARYQDGWRLD---------VPRLNLATDGQS 309 >gi|281602623|gb|ADA75607.1| putative membrane protein [Shigella flexneri 2002017] gi|313648512|gb|EFS12954.1| uncharacterized protein yhdP [Shigella flexneri 2a str. 2457T] Length = 1266 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---NAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|257061204|ref|YP_003139092.1| hypothetical protein Cyan8802_3430 [Cyanothece sp. PCC 8802] gi|256591370|gb|ACV02257.1| protein of unknown function DUF490 [Cyanothece sp. PCC 8802] Length = 1975 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 41/381 (10%), Positives = 105/381 (27%), Gaps = 17/381 (4%) Query: 1 MLRRVL----IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 +LRR+ I +G V++ +T E Q + I+ + I + Sbjct: 18 LLRRLTHPATIAIGVGSVTVVLIGYTGLRLFLKEYLPPWLETQVSYIINRPIKIGELQDF 77 Query: 57 HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + + I D + I ++++ L ++ + + ++ + Sbjct: 78 SL---TGLSLGSTSIPVTPDNPNQITISKINVKFNPLAVVFRRTLPITISPQKVDVDVFQ 134 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 +++G + + + + K+ + ++ + Sbjct: 135 NAQGQLLTIDVEESKLPVKLDLTFKVEKADINVFPYQKKQPLEVQFKGEARYLEEDVAKW 194 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 L++ + V +G S K+ + S I + Sbjct: 195 QYDLNLALLNSQVKLQGETICSTTESNIKLNVEKLDFSSLTSFIIDFPLRLNSGNVQANL 254 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS--GNFKISDGNVRISRYKLQSIL 294 N+ + G + L ++ N + V + +L Sbjct: 255 NIQSP-SLKEFQGTQAQGNVNLSNLQGQVKPLTKPFEVLSNISFKNNKVLVKNAQLTIGQ 313 Query: 295 PNSSTDEDNKTKVSQDEENLLNFS-ENGAESMHDLNETDFFEEEEKKNKNDDLK----KD 349 + + + +N G L + + E + + N L K Sbjct: 314 ITAK--LGGEYDWNTGSNLAVNLEGLTGRNLRQVLPPSFSLQVEGELDANFKLTGQLNKP 371 Query: 350 DIQYSVNKKEEKDNSHDKENQ 370 ++ +N K+ K +Q Sbjct: 372 LLKGKINNKKALTVLKTKFDQ 392 >gi|220916977|ref|YP_002492281.1| hypothetical protein A2cp1_1873 [Anaeromyxobacter dehalogenans 2CP-1] gi|219954831|gb|ACL65215.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 385 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 93/307 (30%), Gaps = 25/307 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR+ + LG L + + + W + + G + ++I +L Sbjct: 7 RRLAVALGILLVLGIAARLALGPIATWRTRK-----VLAGLEGMRGTFS-DVEIRLL-SL 59 Query: 63 SVFFKDIRI---DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 S D+RI + E + + LL G + + + +P LN + Sbjct: 60 SYVIHDLRIVKVGAGGAALPYLEAERVELGLYGKELLHGNVVAG-VELRRPKLNLLVGKA 118 Query: 120 GVSNWFQRKSTM-----DMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQISAR 172 ++++ + + +++ VK G + +D + L + + Sbjct: 119 RERTQAAKEASEAGRGLERLAPFRIDRAEVKDGELLWVDGREKEKPRLWFHGIEATLENF 178 Query: 173 FLNIIS---PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 ++ + + ++ GT + F + L++ Sbjct: 179 ATRAALARREPTVLAARATLQRSGTVSVFATADPLAKQLTFAGQGTVTGLRLAELGELLD 238 Query: 230 IIIDL---FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 DL G L + G S G + + EL A S L K + + Sbjct: 239 AKTDLVPEKGTLDLYVRFRAEDGRLS-GGVRPLVKDAELKAGASDLGTRLKAMLADASLH 297 Query: 287 RYKLQSI 293 + + Sbjct: 298 LFSDERG 304 >gi|197122201|ref|YP_002134152.1| hypothetical protein AnaeK_1794 [Anaeromyxobacter sp. K] gi|196172050|gb|ACG73023.1| conserved hypothetical protein [Anaeromyxobacter sp. K] Length = 385 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 91/306 (29%), Gaps = 23/306 (7%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR+ + LG L + + + W + + G + ++I +L Sbjct: 7 RRLAVALGILLVLGIAVRLALDPIATWRTRK-----VLAGLEGMRGTFS-DVEIRLLSLS 60 Query: 63 SVF--FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 V + +++ + E + + LL G + + + +P LN + Sbjct: 61 YVIHHLRIVKVGAGGAALPYLEAERVELGLYGKELLHGNVVAG-VELRRPKLNLLVGKAR 119 Query: 121 VSNWFQRKSTM-----DMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQISARF 173 +++ + + +++ VK G + +D + L + + Sbjct: 120 ERTQAAKEAPEAGRGLERLAPFRIDRAEVKDGELLWVDGREKEKPRLWFHGIEATLENFA 179 Query: 174 LNIIS---PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 ++ + + ++ GT + F + L++ Sbjct: 180 TRAALARREPTVLAARATLQRSGTVSVFATADPLAKQLTFAGQGTVTGLRLAELGELLDA 239 Query: 231 IIDL---FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 DL G L + G S G + + EL A L K + + Sbjct: 240 KTDLVPEKGTLDLYVRFRAEDGRLS-GGVRPLVKDAELKAGAPDLGTRLKAMLADASLHL 298 Query: 288 YKLQSI 293 + + Sbjct: 299 FSDERG 304 >gi|15803779|ref|NP_289813.1| hypothetical protein Z4604 [Escherichia coli O157:H7 EDL933] gi|15833372|ref|NP_312145.1| hypothetical protein ECs4118 [Escherichia coli O157:H7 str. Sakai] gi|187776432|ref|ZP_02802647.2| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4196] gi|188025261|ref|ZP_02777164.2| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4113] gi|189010328|ref|ZP_02806396.2| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4076] gi|189401895|ref|ZP_02779234.2| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4401] gi|189403231|ref|ZP_02794108.2| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4486] gi|189404348|ref|ZP_02788789.2| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4501] gi|189404779|ref|ZP_02811138.2| conserved hypothetical protein [Escherichia coli O157:H7 str. EC869] gi|189406041|ref|ZP_02825964.2| conserved hypothetical protein [Escherichia coli O157:H7 str. EC508] gi|208809716|ref|ZP_03252053.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7 str. EC4206] gi|208813185|ref|ZP_03254514.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7 str. EC4045] gi|208821581|ref|ZP_03261901.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7 str. EC4042] gi|209398580|ref|YP_002272708.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7 str. EC4115] gi|217327279|ref|ZP_03443362.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7 str. TW14588] gi|254795188|ref|YP_003080025.1| hypothetical protein ECSP_4214 [Escherichia coli O157:H7 str. TW14359] gi|291284613|ref|YP_003501431.1| hypothetical protein G2583_3965 [Escherichia coli O55:H7 str. CB9615] gi|12517869|gb|AAG58373.1|AE005552_3 hypothetical protein Z4604 [Escherichia coli O157:H7 str. EDL933] gi|13363591|dbj|BAB37541.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|187767168|gb|EDU31012.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4196] gi|188013932|gb|EDU52054.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4113] gi|189001012|gb|EDU69998.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4076] gi|189358421|gb|EDU76840.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4401] gi|189361834|gb|EDU80253.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4486] gi|189366129|gb|EDU84545.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4501] gi|189374037|gb|EDU92453.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC869] gi|189376836|gb|EDU95252.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC508] gi|208729517|gb|EDZ79118.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7 str. EC4206] gi|208734462|gb|EDZ83149.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7 str. EC4045] gi|208741704|gb|EDZ89386.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7 str. EC4042] gi|209159980|gb|ACI37413.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7 str. EC4115] gi|209757678|gb|ACI77151.1| hypothetical protein ECs4118 [Escherichia coli] gi|209757680|gb|ACI77152.1| hypothetical protein ECs4118 [Escherichia coli] gi|209757682|gb|ACI77153.1| hypothetical protein ECs4118 [Escherichia coli] gi|209757684|gb|ACI77154.1| hypothetical protein ECs4118 [Escherichia coli] gi|209757686|gb|ACI77155.1| hypothetical protein ECs4118 [Escherichia coli] gi|217319646|gb|EEC28071.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7 str. TW14588] gi|254594588|gb|ACT73949.1| conserved membrane protein, predicted transporter [Escherichia coli O157:H7 str. TW14359] gi|290764486|gb|ADD58447.1| hypothetical protein G2583_3965 [Escherichia coli O55:H7 str. CB9615] gi|326337940|gb|EGD61774.1| hypothetical protein ECF_05566 [Escherichia coli O157:H7 str. 1125] gi|326347509|gb|EGD71234.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7 str. 1044] Length = 1266 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|198276148|ref|ZP_03208679.1| hypothetical protein BACPLE_02337 [Bacteroides plebeius DSM 17135] gi|198270960|gb|EDY95230.1| hypothetical protein BACPLE_02337 [Bacteroides plebeius DSM 17135] Length = 1544 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 39/372 (10%), Positives = 111/372 (29%), Gaps = 32/372 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQA----TLIVGKKIAVKGGIKIH 57 +++ + G + + + + + I + +A + G I ++ +I Sbjct: 6 MKKYIKWGGIVLASPFILFIVLCILIYIPAVQNFIVDKATFYASQATGMNIHIQ---RIS 62 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 + ++ + + +D +E L+++ + LPL+ +I + + + +N Sbjct: 63 LSFPLNLVVHETTVTNPQD--TLLNVEKLTVKIQLLPLVKKQIEIDGVELKNASVNTVDL 120 Query: 118 SKGV-------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 +G+ + + IL ++ +K +K+ ++ Sbjct: 121 IEGMSLQGNLGELFLKSHGVDLTPETAILNELTLKDANLKLCLADTTAQDTTQSTPTFWK 180 Query: 171 ARFLNI---ISPLSIDSIKGSVIAE---GTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 + I +D S+ G + + A + K + + Sbjct: 181 FKLEKIDLANVDFQMDMPLDSMNLGLTVGNASLRDGLVDLHKAAYSAKEFKLLQSGLYYN 240 Query: 225 -PLAYPIIIDLFGN------LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 PI L + + Y G A L + G + Sbjct: 241 SGNTPPIEKGLDPSHIAVTDINLQMDSLYYQGNNIRALLHQFELKERSGLEIKSTEGQLQ 300 Query: 278 ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL---NFSENGAESMHDLNETDFF 334 + +R+ ++++ + V++ ++ + F ++ D Sbjct: 301 ADEKAIRVPSLQIKTANSFLALKATIDWSVTEQNQDGVLNGQFMAEIGKADLFKLIPDMP 360 Query: 335 EEEEKKNKNDDL 346 +E + L Sbjct: 361 QEFIQSFPAAPL 372 >gi|157162723|ref|YP_001460041.1| hypothetical protein EcHS_A3435 [Escherichia coli HS] gi|157068403|gb|ABV07658.1| conserved hypothetical protein TIGR02099 [Escherichia coli HS] Length = 1266 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 39/333 (11%), Positives = 91/333 (27%), Gaps = 26/333 (7%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315 + S I + ++ E Sbjct: 295 WQFSIPD-TRITMDGKPWPSGALTLAWIPEQDF 326 >gi|193065331|ref|ZP_03046402.1| conserved hypothetical protein [Escherichia coli E22] gi|194429136|ref|ZP_03061666.1| conserved hypothetical protein [Escherichia coli B171] gi|260846052|ref|YP_003223830.1| hypothetical protein ECO103_3986 [Escherichia coli O103:H2 str. 12009] gi|192926972|gb|EDV81595.1| conserved hypothetical protein [Escherichia coli E22] gi|194412861|gb|EDX29153.1| conserved hypothetical protein [Escherichia coli B171] gi|257761199|dbj|BAI32696.1| conserved predicted membrane protein [Escherichia coli O103:H2 str. 12009] Length = 1266 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|114047978|ref|YP_738528.1| hypothetical protein Shewmr7_2486 [Shewanella sp. MR-7] gi|113889420|gb|ABI43471.1| protein of unknown function DUF748 [Shewanella sp. MR-7] Length = 1067 Score = 60.7 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 32/351 (9%), Positives = 110/351 (31%), Gaps = 33/351 (9%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP-SVFFK 67 + ++ + + + + T ++G+ + ++ + I PF V + Sbjct: 21 ILAYLAITYLSYLIILGLVLPKAVVSFAPEKLTEVLGRPVTLQ---DLRINPFTYRVNIE 77 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG------ 120 + + + ++ + + L F + + + + + + P Sbjct: 78 QLEVKESDN-QAFAGLSQLQFEVNFWQSVFNQALVIDHIQLQGPFAKVSRFQSKGATQFN 136 Query: 121 ------VSNWFQRKSTMD------MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 N + S + VIL + + G++K D + + ++N + Sbjct: 137 FDDILTRLNQAKTPSEPETTTENTRPLRVILGEFSLTAGKVKFEDNVTHALVDYPNINFK 196 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 +S + S + + + + + A+ Sbjct: 197 LSQLDTEYLMTSKPASPANGQPTQSQDKPATAAPTTQANTASNPPSILHNQFVAQLQDAH 256 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFS------KLLNLELSAKKSRLSGNFKIS--- 279 + L G + + + + ++L+A + ++ ++++ Sbjct: 257 AGEVSLAGQFQLFPFKLVGDVQLAKLQLAPFWPFVAEQFKVKLAAGELSINSHYQVELPA 316 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330 GN++++ + Q I+ +++ ++ + + N A+ D+ + Sbjct: 317 GGNLQLTADRGQVIVEKVDLLNGDQSIIALPLLAIDGINLNLAKQRIDIKQ 367 >gi|190571054|ref|YP_001975412.1| hypothetical protein WPa_0647 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019575|ref|ZP_03335381.1| putative exported protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357326|emb|CAQ54755.1| Putative exported protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212994997|gb|EEB55639.1| putative exported protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 829 Score = 60.7 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 103/357 (28%), Gaps = 37/357 (10%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--- 78 F DW+ +RE ++ K+ V G I++ ++ P + ++ + ++ Sbjct: 20 VAATFKDWSGYREYIVKELEKTYDAKVHVGGKIEVSLI-TPKLTIHNVYVQYNKNKEQKL 78 Query: 79 -FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV 137 + + +R S ++ + SN + ++ N Sbjct: 79 SDLISAKKIEIRPSL---FSFSLQPKSISFLGM----------KSNKENLLNIINTKAND 125 Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197 + I +K +I +N++ A N + + G N Sbjct: 126 NIVDILIKDSQISF---------NADTINIKEVAIKKNKQFFGEVQIGDNNYDFSGKVNV 176 Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257 + +NF + + L N SG+ + Sbjct: 177 TKNNVHISVDSNFA--------NLLFKGNRNQEELKGNLVLTINNNSDSMSGLAKI--IN 226 Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317 L+ + ++ +S N +++ + K++S + N K N+ Sbjct: 227 LSFLSYVIPSENIEISSNINLNESEFTATDLKIESKSMQGTGIIQNDRKSDHTNINISFS 286 Query: 318 SENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374 + H + E ++ +L D + N + + F+ Sbjct: 287 KVDLKNGSHKTTDMKGLLESFREVVPKNLSLDFNMEASNIQYQNRILDKFHATLKFA 343 >gi|94265824|ref|ZP_01289556.1| hypothetical protein MldDRAFT_5086 [delta proteobacterium MLMS-1] gi|93453631|gb|EAT04021.1| hypothetical protein MldDRAFT_5086 [delta proteobacterium MLMS-1] Length = 1253 Score = 60.7 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 87/311 (27%), Gaps = 27/311 (8%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89 R+ QA +G+ + V+ +++ P P + I + ++ L Sbjct: 30 DYARQQVASQAEAQLGQPVGVE-SLEVAWYPLPHLLLVGIAAEDHGWS---LQMPRLEFH 85 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149 + L G + + + + P L+ + + ++ +K GR+ Sbjct: 86 PRWRTLWRGRLEIGQIVLQDPTLSLDPDA-------FAIPEPKSLVLPTTGELLLKNGRL 138 Query: 150 KI----------IDQESDQVYFLSDLNLQISARFLNIISPLSID-SIKGSVIAEGTGNFD 198 ++ + LS +N ++ A + L+ S + G + Sbjct: 139 EVAGYSGGLLGLDLGLELAPWQLSAINGRLRAETSRLELELTTTPSFGNELRLAGWLTPE 198 Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF---WNEKQPIYSGVFSVAG 255 T ++ + I +L + +G Sbjct: 199 GGH-QLSATGRGLEFDQLLRGAAHGRIATLETIANLELTSQGQAVDHFTATINGEMPCLL 257 Query: 256 DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT-KVSQDEENL 314 + + +RL + +D +RI +++ S + + E Sbjct: 258 LEPEQDRVRFDCGLARLELQRRGADFKLRIHELEIREPELALSGLVSRRLPPAEDNAEPH 317 Query: 315 LNFSENGAESM 325 G + Sbjct: 318 WEIELAGRDLD 328 >gi|325110512|ref|YP_004271580.1| hypothetical protein Plabr_3981 [Planctomyces brasiliensis DSM 5305] gi|324970780|gb|ADY61558.1| hypothetical protein Plabr_3981 [Planctomyces brasiliensis DSM 5305] Length = 1162 Score = 60.7 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 102/327 (31%), Gaps = 15/327 (4%) Query: 6 LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLI-VGKKIAVKGGIKIHILPFPSV 64 L+ + ++V+ A ++ I+ + V Sbjct: 39 LLIVAGGIALVVAVAVLWGWSQRDEFLTSMIRKELAEKHADWNISFA---NAELDHRGRV 95 Query: 65 FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKGVSN 123 ++ ++ D ++GL + + LL G++ V + +++P L + G N Sbjct: 96 VLANVTVNPHGDAEPLCAMQGLRVTVDRELLLDHGKVDVKAVEVNRPKLTLIRTFDGQWN 155 Query: 124 WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS----DLNLQISARFLNIISP 179 W T D V L KI + E ++ L D++L +++ Sbjct: 156 WQNLPLTGDNDKPVPLIKIRDACVAVVWEHAEFERALRLQVDAVDVDLTPTSQHGYTFKG 215 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 + + G GT + +K + ++ + +I G Sbjct: 216 VGREETLGQSQFSGTFDARHKTWELTGHLKGLSIDQPFLQAAAMLSPDAERVISRLGESQ 275 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 + + QP G + + + K+ + N S V + + L+ + ++ Sbjct: 276 FRKDQPEVPGS---SPNSNANEIRTAQLKEPAVLANTAASRITVGDNAFSLKLL---ANL 329 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMH 326 ++ + + + + H Sbjct: 330 QFHCSRQLDAEADFSVFADLVSGQLEH 356 >gi|303230973|ref|ZP_07317716.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6] gi|302514355|gb|EFL56354.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6] Length = 1429 Score = 60.7 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 108/341 (31%), Gaps = 29/341 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKI--AVKGGIKIHILP 60 ++ + + + + G I+ R + + ++ +HI Sbjct: 4 KKWCLIGAAVLGLGVAGIAAS---INPIAER-YVAPMVQEQLHNTVRGTIQYD-SMHIAW 58 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-------GEIRVFDMYIDQPHLN 113 V +++ + + + + + +++ ++ + S G V + +++P ++ Sbjct: 59 NGDVVLQNVSLRDENNHL-VAAVPTMNVSMKYTSVPSILMGNSSGAAIVSTITLEKPDIH 117 Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG---GRIKIIDQESDQVYFLSDLNLQIS 170 + + G N + V G ++ D V+ LS+L+ I+ Sbjct: 118 VWQLADGSWNVNSLLEPSPKSDKKSFDGNIVVNDATGAVRFKD---GNVHRLSNLDGNIA 174 Query: 171 -ARFLNIISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLKIQLFPLAY 228 L+ S+ G+ N + + A + +++ L+ Sbjct: 175 LNVDGMTKGALNGLLDDHSIAVNGSINMNKMDDFDLFVRAESVDISGIMNMAPSNKNLSI 234 Query: 229 PIII--DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 I D+ + + + SG + G N + + + + +G + V IS Sbjct: 235 TSGILHDVKAQITGRDGKYSMSGNLAFDGVGGTYKNGDTTYQIGQGNGKIFFQNNTVLIS 294 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 S + V+ +E LN + + Sbjct: 295 H----SGWYVNDQAIKVNGLVTLGDEVGLNLNAVADSIALE 331 >gi|323946907|gb|EGB42923.1| adhesin HecA family protein [Escherichia coli H120] Length = 1263 Score = 60.7 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G N S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|188495453|ref|ZP_03002723.1| conserved hypothetical protein TIGR02099 [Escherichia coli 53638] gi|188490652|gb|EDU65755.1| conserved hypothetical protein TIGR02099 [Escherichia coli 53638] Length = 1266 Score = 60.7 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGVLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|293412613|ref|ZP_06655336.1| hypothetical protein ECEG_02629 [Escherichia coli B354] gi|291469384|gb|EFF11875.1| hypothetical protein ECEG_02629 [Escherichia coli B354] Length = 1263 Score = 60.7 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G N S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|331664853|ref|ZP_08365758.1| conserved hypothetical protein [Escherichia coli TA143] gi|331058101|gb|EGI30083.1| conserved hypothetical protein [Escherichia coli TA143] Length = 1263 Score = 60.7 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G N S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|300904438|ref|ZP_07122284.1| hypothetical protein HMPREF9536_02516 [Escherichia coli MS 84-1] gi|301304291|ref|ZP_07210405.1| hypothetical protein HMPREF9347_02896 [Escherichia coli MS 124-1] gi|300403600|gb|EFJ87138.1| hypothetical protein HMPREF9536_02516 [Escherichia coli MS 84-1] gi|300840417|gb|EFK68177.1| hypothetical protein HMPREF9347_02896 [Escherichia coli MS 124-1] gi|315257170|gb|EFU37138.1| paral putative protease [Escherichia coli MS 85-1] Length = 1263 Score = 60.7 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G N S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|300898013|ref|ZP_07116385.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 198-1] gi|300358263|gb|EFJ74133.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 198-1] Length = 1263 Score = 60.7 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G N S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|309793822|ref|ZP_07688248.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 145-7] gi|308122779|gb|EFO60041.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 145-7] Length = 1263 Score = 60.7 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G N S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|300817503|ref|ZP_07097719.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 107-1] gi|300529801|gb|EFK50863.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 107-1] Length = 1263 Score = 60.7 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G N S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|223937867|ref|ZP_03629767.1| hypothetical protein Cflav_PD2738 [bacterium Ellin514] gi|223893473|gb|EEF59934.1| hypothetical protein Cflav_PD2738 [bacterium Ellin514] Length = 227 Score = 60.7 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 5/133 (3%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + LF +++V L +D +E E + G + + G +++ I Sbjct: 1 MKFLFRWAFRLFILLVVLVIAGILLLDT-IAKEVAEYRIRRQTGLDVKI-GRMQVGIF-N 57 Query: 62 PSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 V +++ I GS + L + + LLS ++ + + LN Sbjct: 58 SRVTIENLVIYNTAEFGGSPLIDLPELHVEYDRDSLLSHKLHCKLVRFNLAQLNLVEDKN 117 Query: 120 GVSNWFQRKSTMD 132 G N Q ++ M Sbjct: 118 GNLNVAQLQARMQ 130 >gi|323979044|gb|EGB74122.1| adhesin HecA family protein [Escherichia coli TW10509] Length = 1263 Score = 60.7 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G N S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|301022182|ref|ZP_07186099.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 69-1] gi|300397649|gb|EFJ81187.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 69-1] Length = 1263 Score = 60.7 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G N S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|256018841|ref|ZP_05432706.1| hypothetical protein ShiD9_07988 [Shigella sp. D9] gi|300824397|ref|ZP_07104511.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 119-7] gi|300523126|gb|EFK44195.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 119-7] Length = 1263 Score = 60.3 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G N S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|91762856|ref|ZP_01264821.1| hypothetical protein PU1002_06286 [Candidatus Pelagibacter ubique HTCC1002] gi|91718658|gb|EAS85308.1| hypothetical protein PU1002_06286 [Candidatus Pelagibacter ubique HTCC1002] Length = 483 Score = 60.3 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 36/310 (11%), Positives = 99/310 (31%), Gaps = 29/310 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 + ++ + LF+ + +PL D + + + + I ILP P Sbjct: 34 KYIITAISILFAYIF--YLLIPLLYDKNWVQNKIVSKLSSEFNINLTNSFDISYRILPKP 91 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYLSSKGV 121 +D + ++I+ L++ + + IR+ +++I++ + + + Sbjct: 92 HYLIRD-------SKTSLAEIKTLNVLISQNNFFNKDSIRINEVFIEEANFSLLSN---- 140 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD--QVYFLSDLNLQISARFLNIISP 179 + D + +KI + + + ++ + +S+ L + L + Sbjct: 141 ---DLKPLYKDSENKFSKKKIKINDSNVFFKNNLNEVISIIKISNAFLFFDEKNLFNLFD 197 Query: 180 LSIDSIKGSVIAEGTGNFDNKRS------AFKITANFPAKNKAISLKIQLFPLAYPIIID 233 L + +++++ K+ K L + ++ ++ Sbjct: 198 LKGEIFNIPFELNYQNTINSQKNIKIKASDIKLKIIDKFFKKDEDLNSGMNNISI---LN 254 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 N ++ K I + + +N + N KI N +IS Sbjct: 255 SSINTKYSIKDQIVIFQSDGSKTLNSKINYNGQLAINPFDLNLKIDLYNYKISNL-FTPN 313 Query: 294 LPNSSTDEDN 303 + + Sbjct: 314 SIINEFIKSG 323 >gi|221067237|ref|ZP_03543342.1| AsmA family protein [Comamonas testosteroni KF-1] gi|220712260|gb|EED67628.1| AsmA family protein [Comamonas testosteroni KF-1] Length = 737 Score = 60.3 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 51/436 (11%), Positives = 110/436 (25%), Gaps = 86/436 (19%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPS------------VFFKDIRID 72 F+DW R + + G++ A+ G +++ P P V D+ + Sbjct: 47 FMDWNKLRPWINEKVSSSTGREFAINGDLQLQWTWPQPLDTGWRHWVPGVVVHASDLTLS 106 Query: 73 QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL---------SSKGVSN 123 Q + + E + LP E+ + N + G Sbjct: 107 QPQGWLVQQAPEKADDKQPVLPATPKELNTGRLPGQGQAANEKRTAADDDDAIADAGRQP 166 Query: 124 WFQRKSTMDMIH--------------NVILEKIHVKGGRIKIIDQESDQ----------- 158 + TM +V L+ + ++ + + + + Sbjct: 167 PERDARTMITAANATASLRLWPLLARHVQLDSLLLQAPDMVLARNDKGENNWTFDKPTSS 226 Query: 159 ---------VYFLSDLNLQISARFLNIISPLSIDSIKGSV--------IAEGTGNFDNKR 201 +SD L S N+ ID+++ V TG + Sbjct: 227 GPKWSLDIGQLRISDGVLGWSDAIKNMAVRARIDTLRRPVSADQPYGMRFGLTGYLHQGK 286 Query: 202 SAFKITAN------FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255 + +I A + + +++ + G L + V G Sbjct: 287 TRAQIQAQGLAGQVLDLRQDRLRFPLRISAKVGSLQAFAEGFLDNPKTLDGLDFQVKVLG 346 Query: 256 DFSKLLNLELSAKKSR---------LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 L L G+ + + ++K + + S D Sbjct: 347 KSMADLFELTGLLLPATPPFETSGHLIGSLQPGKAVWQYEKFKGRLGQSDLSGDLQ---Y 403 Query: 307 VSQDEENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDDLK---KDDIQYSVNKKEEKD 362 S L + DL K + +++ ++ D Sbjct: 404 RSAQPRPKLTAQLRSKQLRLVDLGPVIGAAPSGSSGKPQPVNGRVLPQVRFQTENWDKMD 463 Query: 363 NSHDKENQENFSGDKM 378 E+ + + Sbjct: 464 LDLRYESNHILRPEAL 479 >gi|218708386|ref|YP_002416007.1| hypothetical protein VS_0346 [Vibrio splendidus LGP32] gi|218321405|emb|CAV17355.1| Hypothetical protein VS_0346 [Vibrio splendidus LGP32] Length = 1290 Score = 60.3 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 24/329 (7%), Positives = 90/329 (27%), Gaps = 28/329 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTV-PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59 +LR L + L + + T+ + ++ + E G + +++ Sbjct: 8 ILRTCLWLVVTLLVTLAIAVTTLRVALPNLNKYQSEIELWVNQHSGFEFSIQDVGGFWRN 67 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG------EIRVFDMYIDQPHLN 113 PS+ + ++ +E + + + + + ++ + MY+D ++ Sbjct: 68 THPSIALQGVKASLPNAEDVAFSVERVEVEFDLIQSVVQMRPVVADLVMNQMYLDIRSID 127 Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVI------LEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 + G S+ +I + L + K + S + L L Sbjct: 128 LFAGQNGKDEPKDPGSSKRVIQELDNLLLKTLVDVTAKDSSLLYRT-ISGEERQLDIETL 186 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 + + ++ + N ++ + + + ++ Sbjct: 187 KWQNSGKHHLAEGVVSIK--------DANLNSLSVSANFVDGGSLTDMTGEFYVSADSIS 238 Query: 228 YPIIID--LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 + + + ++ +E+ + + + + + + Sbjct: 239 VMPWLTRYMQAESGIETGTVSLNSWLTLRNSKPVSAYVEVLPSELTWNEDGQHD---LML 295 Query: 286 SRYKLQSILPNSSTDEDN-KTKVSQDEEN 313 + + + + D+ Sbjct: 296 ESGVFKLSPIDGGWQVNGHSLNLRTDDRP 324 >gi|39995786|ref|NP_951737.1| hypothetical protein GSU0680 [Geobacter sulfurreducens PCA] gi|39982550|gb|AAR34010.1| conserved hypothetical protein [Geobacter sulfurreducens PCA] gi|298504794|gb|ADI83517.1| DUF748 repeat protein [Geobacter sulfurreducens KN400] Length = 1187 Score = 60.3 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 30/290 (10%), Positives = 82/290 (28%), Gaps = 27/290 (9%) Query: 40 ATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE 99 + +G V G ++ S +++ + G + GL R +L+GE Sbjct: 247 LSTTLGITYRVAEGKDPDLMVSGSARLAGVKVAE-HGGVPLLALAGLEARLNRARVLAGE 305 Query: 100 IRVFDMYIDQPHLNFYLSSKGVSNWF-------------QRKSTMDMIHNVILEKIHVKG 146 + + +++P ++ + G+ N ++ ++ V + + + Sbjct: 306 FPLSLVTLERPEIHLARDAAGIWNLQRLAGKKTAAPAAEEKPASPGRKPLVSVAEFRLAD 365 Query: 147 GRIKIID--QESDQVYFLSDLNLQISARFLNIISPLS-----IDSIKGSVIAEGTGNFDN 199 G +++ D + + + + + EG D Sbjct: 366 GAVQLDDRLPAGGFAARVEKIAMTVKGFSTAPGTAADCMLSLATGRGEEARVEGRVTPDP 425 Query: 200 KRSAFKITANFPAKNKAISL--KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257 + P+ + + + G +A Sbjct: 426 LALTGTVQVAGIDLGAYYPYLSPYLTAPVTGKLDAGADIGFSTPDGVRVDKGRIRLASLR 485 Query: 258 SKLLNLELSAKKSRLSGN---FKISDGNVRISRYKLQSILPNSSTDEDNK 304 + A+ + ++G F D N+ + +L+ S + + Sbjct: 486 VPFEG-KDEARLAEVAGEDIAFVQKDANLTVGAVRLRDGEIRFSRNGKGE 534 >gi|300926012|ref|ZP_07141835.1| hypothetical protein HMPREF9548_04040 [Escherichia coli MS 182-1] gi|301326318|ref|ZP_07219689.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 78-1] gi|300417956|gb|EFK01267.1| hypothetical protein HMPREF9548_04040 [Escherichia coli MS 182-1] gi|300846984|gb|EFK74744.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 78-1] gi|324020755|gb|EGB89974.1| hypothetical protein HMPREF9542_00522 [Escherichia coli MS 117-3] gi|324119426|gb|EGC13309.1| adhesin HecA family protein [Escherichia coli E1167] Length = 1263 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G N S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|255020617|ref|ZP_05292680.1| hypothetical protein ACA_1780 [Acidithiobacillus caldus ATCC 51756] gi|254970002|gb|EET27501.1| hypothetical protein ACA_1780 [Acidithiobacillus caldus ATCC 51756] Length = 395 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 32/262 (12%), Positives = 74/262 (28%), Gaps = 25/262 (9%) Query: 33 REDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAE 91 R + G+ + + + + + + +I L + Sbjct: 10 RALLVQALGAATGQPVRLAANPHFFLDRDALGIVLDGLVVG--PAAEPLLQIPRLQLEIA 67 Query: 92 FLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI 151 L G +R+ + D P + W S + + + V+G ++ Sbjct: 68 LPALFHGRLRLRQVLADAPRI--------RGPWPTHGSGTGLPPLP--QALLVRGASVQW 117 Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP 211 + L+ LNL L S+ G + ++ ++ Sbjct: 118 TQA--GRTLELTHLNLGWQRSRLYARGQWSVAGAAGYLAVAARWPSASRLGHGQLQLTVR 175 Query: 212 AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR 271 + A L +Q L + + + G + L L A+ +R Sbjct: 176 SSQGADRLHLQASGLQ-------RAGADLHMARLVGRGSWRGREFSLNLEQLAWQAQSAR 228 Query: 272 LS---GNFKISDGNVRISRYKL 290 LS + + + + ++L Sbjct: 229 LSCADSRLRTAGAALELRDFQL 250 >gi|270488600|ref|ZP_06205674.1| conserved hypothetical protein TIGR02099 [Yersinia pestis KIM D27] gi|270337104|gb|EFA47881.1| conserved hypothetical protein TIGR02099 [Yersinia pestis KIM D27] Length = 1198 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 104/327 (31%), Gaps = 33/327 (10%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PS 63 G + V L+ + + ++R + + G + V G ++ F P+ Sbjct: 2 FATGATIIVVVALLVSALRMMLPLINEYRPQIVAKIQSVSGIPLDV-GFMQGTWETFGPT 60 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + +DIR + +++ +++ + LL + D+ Q L+ + + Sbjct: 61 LELRDIRAQMPKAD---LQVQRVTLALDVWQSLLHWRWQFRDLTFYQLQLDLHTTLDATQ 117 Query: 123 NWF--QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISP 179 N + I L++ ++ RI + + + L S+ Sbjct: 118 NNGSNLETGNVHNIFLRQLDRFDLRNSRISFLTPSGPRAELEIPQLTWLNSSTRHRAEGQ 177 Query: 180 LSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID--LFG 236 +S+ +I G + + + + + ++ +Q + I L Sbjct: 178 ISLSTINGQHGVVQVRMDLHDNQGILN----------NGTVYMQADNIDLKPWISRWLQN 227 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 N + + + S+ N+ LS ++ + + + + + L+ Sbjct: 228 NTGLDNAEFSLAAWLSIKSGEVYRGNVLLSQGQANWT--VGSNSHQLSVDNFVLEGRRQG 285 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAE 323 + D +LN +G Sbjct: 286 NGWQID---------APVLNLKTDGQA 303 >gi|110807107|ref|YP_690627.1| hypothetical protein SFV_3272 [Shigella flexneri 5 str. 8401] gi|110616655|gb|ABF05322.1| Uncharacterized membrane protein [Shigella flexneri 5 str. 8401] Length = 1266 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|85058138|ref|YP_453840.1| hypothetical protein SG0160 [Sodalis glossinidius str. 'morsitans'] gi|84778658|dbj|BAE73435.1| putative exported protein [Sodalis glossinidius str. 'morsitans'] Length = 1271 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 40/335 (11%), Positives = 94/335 (28%), Gaps = 38/335 (11%) Query: 2 LRRV---LIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56 ++R+ L+ +G V++ + FR I ++ +K Sbjct: 1 MKRLPGILMAIGVTLIVLVALTVSALRLALPHLDRFRPQIVSVLNRAFDADIQLR-QLKS 59 Query: 57 HILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 F P++ I ++ +++ + LL + D+ + L+ Sbjct: 60 SWQSFGPTLDIGGI---DAATADERLHVQRVTLALDVWQSLLHWRWQFRDVTFYRLQLDL 116 Query: 115 YLSSKGVSNWFQR--KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQ 168 + G + + + ++G +I + ++ L+ LN Sbjct: 117 NTTLMGRDHRGSPISSDRFSNLFLRQFDHFILRGSQITFLTPSGERTRLSVPQLTWLNTL 176 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 R IS S + +G++ + N + L+ + L Sbjct: 177 NRHRVEGKISLSSTEVQQGAIDVRMDLHDQQ----------GLLDNGKVYLQARDVDLKP 226 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 L N + ++ ++ LS L + + + R Sbjct: 227 WFSQLLQSNTGLQSADFSLAAWLTLEKGEIAGADVLLSRGA-ALWQDGD-QTHRLDVDRM 284 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 L ++ E LN + +G Sbjct: 285 ALHLSKRQNAWQM---------EVPTLNIATDGQS 310 >gi|74313775|ref|YP_312194.1| hypothetical protein SSON_3387 [Shigella sonnei Ss046] gi|73857252|gb|AAZ89959.1| Uncharacterized membrane protein [Shigella sonnei Ss046] Length = 1266 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|193070335|ref|ZP_03051278.1| conserved hypothetical protein [Escherichia coli E110019] gi|192956394|gb|EDV86854.1| conserved hypothetical protein [Escherichia coli E110019] Length = 1266 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|253771925|ref|YP_003034756.1| hypothetical protein ECBD_0501 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163182|ref|YP_003046290.1| hypothetical protein ECB_03105 [Escherichia coli B str. REL606] gi|242378782|emb|CAQ33573.1| conserved membrane protein, predicted transporter [Escherichia coli BL21(DE3)] gi|253322969|gb|ACT27571.1| uncharacterized protein YhdP [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975083|gb|ACT40754.1| conserved membrane protein, predicted transporter [Escherichia coli B str. REL606] gi|253979239|gb|ACT44909.1| conserved membrane protein, predicted transporter [Escherichia coli BL21(DE3)] Length = 1266 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|227825201|ref|ZP_03990033.1| predicted protein [Acidaminococcus sp. D21] gi|226905700|gb|EEH91618.1| predicted protein [Acidaminococcus sp. D21] Length = 1439 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 99/341 (29%), Gaps = 24/341 (7%) Query: 3 RRVLIGLGFLFSVVLVGA-FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R+ L + ++ + +P + R E A + K+ + +I + P Sbjct: 7 KRLPFLLLVIPALYVGTFKVLMPRVLPT--VRPMVEETAAQYINGKLHID---RIEVSPD 61 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE---IRVFDMYIDQPHLNFYLSS 118 + KD I + +KI +++R L LL G V + I+ P + + S Sbjct: 62 LTFRIKDSAIYDRAGIL-VAKIPEVAVRVNPLNLLLGHGTSRMVSLVAINNPTVYMVMDS 120 Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL-----NLQISARF 173 N + + V G I++ S N Sbjct: 121 SDRWNVENLIKKSESSSEDFRGLVTVNRGSIQLSTPYGTWHVGASGSIDLVHNPVYGLDM 180 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 + GS+ ++GTG F +T + + Sbjct: 181 DLTTEKGETLQLIGSIKSDGTGEVSASTETFCVTPYAALVAHYAPI-----AELAGTLSK 235 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 L ++++ SG + L + + G + ++ + + + Sbjct: 236 LSVTWRNDDQESKLSGSVKADSLSLSVHKDNLLLPLTAV-GTVHFDNKDLAFTDFTVSLD 294 Query: 294 LPNSSTDEDNKTKVSQDEENLL-NFSENGAESMHDLNETDF 333 S + ++ + + F+ + D D Sbjct: 295 RS--SVTLNGGLDLTDAQTPVFHQFAVKTDDFDLDAIPLDL 333 >gi|254461737|ref|ZP_05075153.1| conserved hypothetical protein [Rhodobacterales bacterium HTCC2083] gi|206678326|gb|EDZ42813.1| conserved hypothetical protein [Rhodobacteraceae bacterium HTCC2083] Length = 1102 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 68/209 (32%), Gaps = 27/209 (12%) Query: 5 VLIGLGFLFSVVLVGAFTVPL--FIDWTDFREDFERQATLIV-GKKIAVKGGIKIHILPF 61 VL GLG + +G + ++ + + + IA+ G + + I P Sbjct: 30 VLTGLGGFVVALAIGFILLVGRDIKAPDWLQKQIDVKIAEALPNVDIAI-GTMSLRIEPS 88 Query: 62 ---PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 P VFF+++ + E G + + LS+RA F + G+ + + + S Sbjct: 89 DLSPRVFFQNVSVKD-ETGLPFASLGELSVRAAFPAAIRGQFLPKKISLSGALMKLRRGS 147 Query: 119 KGVSNWFQRKSTMDMIHNVI-------------------LEKIHVKGGRIKIIDQESDQV 159 G + + L +++ + D + + Sbjct: 148 DGGFDLTIGSALQVSGEGASLIALIESLDSLLVQHELRYLREVNATSLTVLYEDARAGRA 207 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGS 188 + + ++I++ + + G Sbjct: 208 WTVDGGRMRINSDGEALTIGADFALLGGQ 236 >gi|83816380|ref|YP_445385.1| hypothetical protein SRU_1261 [Salinibacter ruber DSM 13855] gi|83757774|gb|ABC45887.1| Domain of unknown function (DUF490) family [Salinibacter ruber DSM 13855] Length = 1689 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 33/266 (12%), Positives = 71/266 (26%), Gaps = 15/266 (5%) Query: 63 SVFFKDIRIDQKEDGS----FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 S+ D+ + + + ++ L++ LL G + + + ID P ++ Sbjct: 53 SLRLADVSLTRPAPDRAAPATMAHVDSLAVEYRPWALLRGRLHLTAVSIDGPSATLRQAA 112 Query: 119 KGVSNW-------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 +W + ++++ V G + L I A Sbjct: 113 DSTWDWARHLPASAPASEDTSAALPIRVDRLRVSAGTFAAQFYAGGRDSTARIQGLTIRA 172 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 + L LS+ ++ G D + A+ ++L + Sbjct: 173 QDL--YYGLSMGGRLDTLGLRGRLPTDTTELRLAARGAVSERRVALD-TLRLASPRSAVQ 229 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS-DGNVRISRYKL 290 L + SV D L +L A + + + S +L Sbjct: 230 GGGTARLPAAPGDSLDDVALSVRADPLVLGDLTAFAPFLDVDPREALDLRARLTGSEDRL 289 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLN 316 + D + L Sbjct: 290 ALTTDVTVRDGGGRFTAEATATPHLA 315 >gi|238921342|ref|YP_002934857.1| hypothetical protein NT01EI_3486 [Edwardsiella ictaluri 93-146] gi|238870911|gb|ACR70622.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 1261 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 30/331 (9%), Positives = 93/331 (28%), Gaps = 33/331 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56 +RR+ L+ V++ + + R + +G + + G + Sbjct: 1 MRRLSGYLLATLATLIVLVALLVSGLRLLLPHIDSVRPQIAARLGQFIGAPLTI-GELSA 59 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNF 114 P + +DI + ++ ++ +++ + L + D+ Q + Sbjct: 60 SWHAFGPMLEARDIALRGEQG---LLQVRRMTLGLDVWQSLLHARPQFRDLTFYQLQAST 116 Query: 115 YL-SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQES-DQVYFLSDLNLQISAR 172 ++ + ++ + I + ++ R++ +S L Sbjct: 117 DRPLAREEGHGGLKRDELSNIFLRQFDHFTLRDSRLRFPSPSGVPLQLTVSQLTWVNGPE 176 Query: 173 FLNIISPLSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 +S + +G + + +K + +Q + Sbjct: 177 RHRAEGEVSFSTPQGQHGNLQLRMDLRDKNGLLS----------DGEIYLQADQIDLRPW 226 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 + + N +S ++ +L + + + + ++ LQ Sbjct: 227 LSRWINRNTGLNAADFSLASWLSVRDGELAGALIRLRDGQAGWRADDRPHRLTVNDLTLQ 286 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGA 322 + + D LN + +G Sbjct: 287 ATRRDGGWQLD---------VPRLNLATDGQ 308 >gi|194439215|ref|ZP_03071296.1| conserved hypothetical protein [Escherichia coli 101-1] gi|194421911|gb|EDX37917.1| conserved hypothetical protein [Escherichia coli 101-1] Length = 1266 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|160899692|ref|YP_001565274.1| AsmA family protein [Delftia acidovorans SPH-1] gi|160365276|gb|ABX36889.1| AsmA family protein [Delftia acidovorans SPH-1] Length = 791 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 42/452 (9%), Positives = 106/452 (23%), Gaps = 101/452 (22%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFP------------SVFFKDIR 70 DW + + + G+ A++G +++ P P ++ + + Sbjct: 82 IATFDWNRAKPWVNERVSESTGRHFAIEGDLRLRWTWPQPLDQGWRHWVPGVTIEAEQLA 141 Query: 71 IDQKEDGS----FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP---------------- 110 + Q E + L L+ + +QP Sbjct: 142 LGQPEGWQVEQEPAKGSDELPALPAPPDQLNKGRLPEEKAKEQPKGKAKDKDEGKDKDSQ 201 Query: 111 --------HLNFYLSSKGVSNWFQRKST---------------MDMIHNVILEKIHVKGG 147 + + + R + + +V+L+ + ++G Sbjct: 202 ASPSAPKIDSDSIVLADEKMAPPPRDAGTMATAARATASLRLWPLLGRHVLLDHLQLEGP 261 Query: 148 RIKIIDQESDQ---------------VYFLSDLNLQISARFLNI-----ISPLSIDSIKG 187 + ++ + ++ L+L+ + +DS+ Sbjct: 262 DLVFARRKDGSNNWTFKRPESTGPRWRFQVAQLSLRGGLVGWSDGVRQMAVRARLDSLVQ 321 Query: 188 SVIAEG--------TGNFDNKRSAFKITANF--PAKNKAISLKIQLFPLAYPIIIDLFGN 237 + TG + +++ ++L+ A + G Sbjct: 322 PPSPDFPYGMRVGLTGRIAKATVEAQGLIGPVLDLQSEQARFPVKLWAHAGSLRARAEGI 381 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFKISDGNVRISRY 288 L + G L R L G+ + + Sbjct: 382 LDNPRALKGMDLQVRLRGSSMADLFPLTGLLLPRTPPFDTNGHLVGSLEPGRAVWDYEEF 441 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDDLK 347 + + S L+ + DL ++ K Sbjct: 442 DGRVGQSDLRGTLH---YASGKPRPKLSGDLASRKLRLADLGPVVGAPSTKQGQKTRQAA 498 Query: 348 KDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 + K N+ D + F D++ Sbjct: 499 SGKALPTQRFDTSKWNAMDMDV--RFKSDRIE 528 >gi|332709716|ref|ZP_08429675.1| hypothetical protein LYNGBM3L_43890 [Lyngbya majuscula 3L] gi|332351543|gb|EGJ31124.1| hypothetical protein LYNGBM3L_43890 [Lyngbya majuscula 3L] Length = 2256 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 36/300 (12%), Positives = 90/300 (30%), Gaps = 15/300 (5%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66 I + + + + + + E + + ++ + + V +++ S+ Sbjct: 34 ITFAMISLTIGLVGYFGVRMWLYQNLPGWIETELSNVIKRDVRVGQLKALYL---TSLEL 90 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS-NWF 125 I I+ + + LPLL + + + + G N Sbjct: 91 GPSSIPATTTDPDHVAIKAIKVGFNPLPLLVKRSLPVTINLVNVDVYAQQEANGEWINLK 150 Query: 126 QRKSTMDMIHNVILE-KIHVKGGRIKIIDQESDQVYFLS-DLNLQISARFLNIISPLSID 183 + L+ K+ V G+I ++ + L D +S + ++ Sbjct: 151 DLNFDNSFSPPIDLDAKVRVWNGKIALLPYGQTNPFKLKLDATAGLSNNNKRLKYSITTA 210 Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL------KIQLFPLAYPIIIDLFGN 237 +G EG +S ++ A + + L I + + L + Sbjct: 211 IAEGKTKLEGKTWLTTGQSQARVNVQNLALAELMPLIRAVIPNIPANLQSGELDAKLNIS 270 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297 L ++ P G G ++ L+ K + + VR+ + + + Sbjct: 271 LPSVKEIPDVKGKAEFKGIQVQVNPLKAPVKA---NARLRFQGDQVRLEKTQGSYGAIEA 327 >gi|254038405|ref|ZP_04872463.1| membrane protein [Escherichia sp. 1_1_43] gi|226840029|gb|EEH72050.1| membrane protein [Escherichia sp. 1_1_43] gi|309703666|emb|CBJ03007.1| possible exported protein [Escherichia coli ETEC H10407] Length = 1266 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|170018511|ref|YP_001723465.1| hypothetical protein EcolC_0461 [Escherichia coli ATCC 8739] gi|169753439|gb|ACA76138.1| uncharacterized membrane protein [Escherichia coli ATCC 8739] Length = 1266 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|269140473|ref|YP_003297174.1| hypothetical protein ETAE_3132 [Edwardsiella tarda EIB202] gi|267986134|gb|ACY85963.1| putative exported protein [Edwardsiella tarda EIB202] gi|304560265|gb|ADM42929.1| Possible exported protein [Edwardsiella tarda FL6-60] Length = 1262 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 30/331 (9%), Positives = 93/331 (28%), Gaps = 33/331 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56 +RR+ L+ V++ + + R + +G + + G + Sbjct: 1 MRRLPGYLLATLATLIVLVALLVSGLRLLLPHIDSVRPQIAARLGQFIGAPLTI-GALSA 59 Query: 57 HILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNF 114 F P++ +DI + + ++ +++ + L + D+ Q + Sbjct: 60 SWQSFGPTLEARDIALRGAQGQ---LQVRRMTLGLDVWQSLLHVRPQFRDLTFYQLQAST 116 Query: 115 YL-SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQES-DQVYFLSDLNLQISAR 172 ++ + ++ + I + ++ R++ +S L Sbjct: 117 DRPLAREEGHGGLKRDELSNIFLRQFDHFTLRDSRLRFPSPSGVPLQLTVSQLTWLNGPD 176 Query: 173 FLNIISPLSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 +S + +G + + +K + +Q + Sbjct: 177 RHRAEGEVSFSTPQGQHGNLQLRMDLRDKNGLLS----------DGEIYLQADQIDLRPW 226 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 + + N +S ++ ++ + + + + + LQ Sbjct: 227 LSRWINHNTGLNAADFSLASWLSVRNGEMAGALVRLRDGQAGWRADDRPHRLTVRDLTLQ 286 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGA 322 + + D LN + +G Sbjct: 287 ATRRDGGWQLD---------VPRLNLATDGQ 308 >gi|194434889|ref|ZP_03067135.1| conserved hypothetical protein [Shigella dysenteriae 1012] gi|194416865|gb|EDX32988.1| conserved hypothetical protein [Shigella dysenteriae 1012] Length = 1266 Score = 60.3 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ IR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHGIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S +I + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRIWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|260857365|ref|YP_003231256.1| hypothetical protein ECO26_4344 [Escherichia coli O26:H11 str. 11368] gi|260869989|ref|YP_003236391.1| hypothetical protein ECO111_4065 [Escherichia coli O111:H- str. 11128] gi|257756014|dbj|BAI27516.1| conserved predicted membrane protein [Escherichia coli O26:H11 str. 11368] gi|257766345|dbj|BAI37840.1| conserved predicted membrane protein [Escherichia coli O111:H- str. 11128] Length = 1266 Score = 59.9 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|49176330|ref|YP_026208.1| conserved membrane protein, predicted transporter [Escherichia coli str. K-12 substr. MG1655] gi|89110007|ref|AP_003787.1| conserved membrane protein, predicted transporter [Escherichia coli str. K-12 substr. W3110] gi|170082776|ref|YP_001732096.1| membrane protein, transporter [Escherichia coli str. K-12 substr. DH10B] gi|238902346|ref|YP_002928142.1| conserved membrane protein, putative transporter [Escherichia coli BW2952] gi|301028270|ref|ZP_07191531.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 196-1] gi|331643944|ref|ZP_08345075.1| conserved hypothetical protein [Escherichia coli H736] gi|55977799|sp|P46474|YHDP_ECOLI RecName: Full=Uncharacterized protein yhdP; Flags: Precursor gi|48994929|gb|AAT48173.1| conserved membrane protein, predicted transporter [Escherichia coli str. K-12 substr. MG1655] gi|85676038|dbj|BAE77288.1| conserved membrane protein, predicted transporter [Escherichia coli str. K12 substr. W3110] gi|169890611|gb|ACB04318.1| conserved membrane protein, predicted transporter [Escherichia coli str. K-12 substr. DH10B] gi|238860255|gb|ACR62253.1| conserved membrane protein, predicted transporter [Escherichia coli BW2952] gi|260447727|gb|ACX38149.1| conserved hypothetical protein [Escherichia coli DH1] gi|299878647|gb|EFI86858.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 196-1] gi|315137830|dbj|BAJ44989.1| hypothetical protein ECDH1ME8569_3133 [Escherichia coli DH1] gi|331037415|gb|EGI09639.1| conserved hypothetical protein [Escherichia coli H736] Length = 1266 Score = 59.9 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|319940801|ref|ZP_08015140.1| hypothetical protein HMPREF9464_00359 [Sutterella wadsworthensis 3_1_45B] gi|319805683|gb|EFW02464.1| hypothetical protein HMPREF9464_00359 [Sutterella wadsworthensis 3_1_45B] Length = 728 Score = 59.9 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 48/382 (12%), Positives = 99/382 (25%), Gaps = 26/382 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR ++ L FL + L + L+ +G + + G +++ LP Sbjct: 4 LRTTIVILLFLSLLALSLVGALTLYATPERVTARAAAMLESHLGLRAELSGDVELKRLPK 63 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + + +D + + + L + RV + +D+ LN +K + Sbjct: 64 LILRIPAGELIHTKDSTHAGRFASAEIELAPWSLFAQSPRVDRVAVDRLELNDISYAKLL 123 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 N ++++ + I+ LS L+ + S + Sbjct: 124 ENTTSSAEH----AVWNIDQLELTQASIRFDALPHVGAGMLSALDAEFSNLSETGGTVRL 179 Query: 182 IDSIKGSVIAEGTGNF--DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 ++ + + + Q + G Sbjct: 180 AGTLTLPQAPSISAALVSEGSAQTLNGLTGTLTFTGVFTFDAQKGLVLQMPAATFDG--- 236 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 + S + S + A+K L G+ + P +S Sbjct: 237 -ISGSMNFKASASASRLTSAPMGQPWIAEKPALGGSLR--------ESTTFSIQAPTASI 287 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDF----FEEEEKKNKNDDLKKDDIQYSV 355 D E + A+ L T + K DL +V Sbjct: 288 TSDG----VFAEYASARGQLSAAKRNWSLAGTAGVDLSWANGSLKLSALDLSSSTDSTTV 343 Query: 356 NKKEEKDNSHDKENQENFSGDK 377 N+ N Q + G Sbjct: 344 NRLTGTLNLSADTLQTDLEGTF 365 >gi|86147834|ref|ZP_01066140.1| hypothetical protein MED222_17275 [Vibrio sp. MED222] gi|85834361|gb|EAQ52513.1| hypothetical protein MED222_17275 [Vibrio sp. MED222] Length = 1290 Score = 59.9 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 23/329 (6%), Positives = 90/329 (27%), Gaps = 28/329 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTV-PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59 +LR L + L + + T+ + ++ + E G + +++ Sbjct: 8 ILRTCLWLVVTLLVTLAIAVTTLRVALPNLNKYQSEIELWVNQHSGFEFSIQDVGGFWRN 67 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG------EIRVFDMYIDQPHLN 113 PS+ + ++ +E + + + + + ++ + MY+D ++ Sbjct: 68 THPSIALQGVKASLPNAEDVAFSVERVEVEFDLIQSVVQMRPVVADLVMNQMYLDIRSID 127 Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVI------LEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 + G S+ ++ + L + K + S + L L Sbjct: 128 LFAGQNGKDEPKDPGSSKRVMQELDNLLLKTLVDVTAKDSSLLYRT-ISGEERQLDIETL 186 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 + + ++ + N ++ + + + ++ Sbjct: 187 KWQNSGKHHLAEGVVSIK--------DANLNSLSVSANFVDGGSLTDMTGEFYVSADSIS 238 Query: 228 YPIIID--LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 + + + ++ +E+ + + + + + + Sbjct: 239 VMPWLTRYMQAESGIETGTVSLNSWLTLRNSKPVSAYVEVLPSELTWNEDGQHD---LML 295 Query: 286 SRYKLQSILPNSSTDEDN-KTKVSQDEEN 313 + + + + D+ Sbjct: 296 ESGVFKLSPIDGGWQVNGHSLNLRTDDRP 324 >gi|332139673|ref|YP_004425411.1| putative protease [Alteromonas macleodii str. 'Deep ecotype'] gi|327549695|gb|AEA96413.1| putative protease [Alteromonas macleodii str. 'Deep ecotype'] Length = 1331 Score = 59.9 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 38/293 (12%), Positives = 83/293 (28%), Gaps = 15/293 (5%) Query: 33 REDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92 + E G +++K + PS+ + + + E I + + +F Sbjct: 44 KHLLEDYINEQYGVNLSIKSVHAVWQRSGPSIVLNSVSLAKDEASPVALDIRQIYVELDF 103 Query: 93 LPLLSGE-IRVFDMYIDQPHLNF--YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149 L + I + L+ S G N F + ++ + L+ ++ G + Sbjct: 104 WQSLRDQLISSTRFELRGLRLDIDADRLSGGGKNNFPVVNALERLFLEQLQSFSLEDGAV 163 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209 I + + L+ + + L + + + A + + R F Sbjct: 164 SITHLNETNSFDIESLSWNNRKQRHQGLGRLKVADLAAN-SASFIIDINGTREDFDGVFY 222 Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP---IYSGVFSVAGDFSKLLNLELS 266 A+ IS + + N I S + + + Sbjct: 223 AKAEELDISPWVSDLIKTKRPLAQSRANFEVWANFANNEITSVQAELNDSLLEWGDGRAK 282 Query: 267 AKKSRLSGNFKISDGN--------VRISRYKLQSILPNSSTDEDNKTKVSQDE 311 SG+ + VR+ + L S +TD + D Sbjct: 283 TITGISSGSLQALPNKKSKRGGWNVRVDQLVLNSGNETMTTDLIGSISANGDA 335 >gi|258590999|emb|CBE67294.1| exported protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 1006 Score = 59.9 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 68/234 (29%), Gaps = 20/234 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R+ + + L A V L + R A G + + G I P Sbjct: 1 MRK-FKSTLIVLLLGLTTAVVVGLLVITLFLPLLLRRFACAPYGIRCTI-GQANIRPRPN 58 Query: 62 PSVFF--KDIRIDQKEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLSS 118 +V + + + +++ L+ + +L+ ++ D+ + P L F Sbjct: 59 LTVDLVIDHLILSDPDGRGVALRVKRLAATLDIPGLILTRQVMPTDVQVGSPELFFRQLD 118 Query: 119 KGVSNWFQRKS-------TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 G N + + + G ++I D + ++D+ + + Sbjct: 119 DGRWNLQALAQEVQRHLRPAARPSRLQFPRASLTNGTLQIRD------HRVTDIRVALEP 172 Query: 172 RFLNIISPLSIDSIKG--SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 + ++ + + SV G + L Q Sbjct: 173 KSFPMLLEMQAQAAVSGRSVRVSGALQNTLEGQILAQVQEVAQPGIPRPLTAQA 226 >gi|117921019|ref|YP_870211.1| hypothetical protein Shewana3_2578 [Shewanella sp. ANA-3] gi|117613351|gb|ABK48805.1| protein of unknown function DUF748 [Shewanella sp. ANA-3] Length = 1076 Score = 59.9 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 37/358 (10%), Positives = 120/358 (33%), Gaps = 43/358 (12%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68 + +++ + + + + ++G+ + ++ ++++ F V + Sbjct: 21 ILAYLTIIYLSYLIILGLVLPKAVVSFAPEKLAEVLGRPVTLQ-DMRVNPFTF-QVNIEQ 78 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL-----SSKGVS 122 + +K++ + + L F + + + + + + P N ++G + Sbjct: 79 FEVKEKDN-QAFAGLSQLQFEVNFWQSVFNQAVVIDHIQLQGPFANIRRFQTQGKTQGKT 137 Query: 123 NW-----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 + + + VIL + + G++K D+ + + ++ Sbjct: 138 QFNFDDIITTLNQAKTPSEPETAAENTPPPRVILGEFSLTAGKVKFDDKITQALVDYPNI 197 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFD----NKRSAFKITANFPAKNKAISLKI 221 N ++ L + V + T D + + + + P Sbjct: 198 NFKLGQLDTEY---LMTANPASPVKGQATTYQDKPATDTPTTQANSTSNPPSILHNQFVA 254 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL------NLELSAKKSRLSGN 275 QL + + L G + + + ++L+A + +S + Sbjct: 255 QLQ-DVHAGEVSLAGQFQLFPFKLVGDAQLAKLQLAPLWQFVAEQFKVKLAAGELSISSH 313 Query: 276 FKIS---DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330 +++ DGNV+++ + Q I+ +++ ++ + + N A+ D+ + Sbjct: 314 YQVELPADGNVQLTVERGQVIVEKVDLLNGDQSVIALPLLAIDGINLNLAKQRVDIKQ 371 >gi|82778553|ref|YP_404902.1| hypothetical protein SDY_3421 [Shigella dysenteriae Sd197] gi|309785571|ref|ZP_07680202.1| uncharacterized protein yhdP [Shigella dysenteriae 1617] gi|81242701|gb|ABB63411.1| Uncharacterized membrane protein [Shigella dysenteriae Sd197] gi|308926691|gb|EFP72167.1| uncharacterized protein yhdP [Shigella dysenteriae 1617] Length = 1266 Score = 59.9 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWVQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|300917436|ref|ZP_07134101.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 115-1] gi|300415346|gb|EFJ98656.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 115-1] Length = 1263 Score = 59.9 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 35/314 (11%), Positives = 87/314 (27%), Gaps = 22/314 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ + + + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVILALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVNNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSST 299 S + + + Sbjct: 295 SIPDTRITMDGNPW 308 >gi|262367296|gb|ACY63853.1| hypothetical protein YPD8_3183 [Yersinia pestis D182038] Length = 783 Score = 59.9 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 104/327 (31%), Gaps = 33/327 (10%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PS 63 G + V L+ + + ++R + + G + V G ++ F P+ Sbjct: 2 FATGATIIVVVALLVSALRMMLPLINEYRPQIVAKIQSVSGIPLDV-GFMQGTWETFGPT 60 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + +DIR + +++ +++ + LL + D+ Q L+ + + Sbjct: 61 LELRDIRAQMPKAD---LQVQRVTLALDVWQSLLHWRWQFRDLTFYQLQLDLHTTLDATQ 117 Query: 123 NWF--QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISP 179 N + I L++ ++ RI + + + L S+ Sbjct: 118 NNGSNLETGNVHNIFLRQLDRFDLRNSRISFLTPSGPRAELEIPQLTWLNSSTRHRAEGQ 177 Query: 180 LSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID--LFG 236 +S+ +I G + + + + + ++ +Q + I L Sbjct: 178 ISLSTINGQHGVVQVRMDLHDNQGILN----------NGTVYMQADNIDLKPWISRWLQN 227 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 N + + + S+ N+ LS ++ + + + + + L+ Sbjct: 228 NTGLDNAEFSLAAWLSIKSGEVYRGNVLLSQGQANWT--VGSNSHQLSVDNFVLEGRRQG 285 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAE 323 + D +LN +G Sbjct: 286 NGWQID---------APVLNLKTDGQA 303 >gi|329850514|ref|ZP_08265359.1| hypothetical protein ABI_34210 [Asticcacaulis biprosthecum C19] gi|328840829|gb|EGF90400.1| hypothetical protein ABI_34210 [Asticcacaulis biprosthecum C19] Length = 1388 Score = 59.9 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 33/340 (9%), Positives = 88/340 (25%), Gaps = 35/340 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV-GKKIAVKGGIKIHIL--- 59 R+ + L +++ I R + + G K ++ + + Sbjct: 18 RLFVFGWLLLMLLVFAWRLSLGPIRIDGIRPLIISRIEATLPGTKASID-HLDLAWFAGA 76 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 F ++ I + L L+ G + + +S + Sbjct: 77 RGVGFRFDNLIIQD-SSKRTIVRAGRLETALAADSLILGHFAPARLTASDVLVVASVSKE 135 Query: 120 GVSNWFQRKSTMDMIHNVILEKI--------------------HVKGGRIKIIDQESDQV 159 G + L++ V+ G++++I + SD Sbjct: 136 GRYDLGFDARGKPGAGPAGLDRFFFDLTGEEKLGRPASFARQVSVRNGQLRLIQEGSDLD 195 Query: 160 YFLSDLNLQISARFLNIISPLSI----DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215 + + S + + + + S A+ G K++ Sbjct: 196 WTARIAAIDFSKLKGRLEAKADLTIVGADSQASFQAQANGVIGLKQATISANLKQLVPAH 255 Query: 216 AIS---LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 + L + P+ + + +R+ Sbjct: 256 VFPSVGVTRHLAAIDAPVNGLARFDYSLAKGFDGAWVDLDAGAGHVAFGGSRQVFDSARI 315 Query: 273 SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312 + +D + ++++S L + TD K ++ + Sbjct: 316 RATYNSTDHTAQFQTFRVRSHLLD--TDLSGKVVITPADR 353 >gi|282879719|ref|ZP_06288449.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1] gi|281306388|gb|EFA98418.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1] Length = 1542 Score = 59.9 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 41/362 (11%), Positives = 115/362 (31%), Gaps = 45/362 (12%) Query: 2 LRRVLIGLGFLFSV------VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55 +++ LI + + + ++ +P W + R A+ +G ++++ K Sbjct: 1 MKKALIWIVSIIGIPALLLTLVAILLYIPPVQQW--LVQQTTRYASKKLGLEVSID---K 55 Query: 56 IHILPFPSVFFKDIRIDQKEDGSFESK-----IEGLSMRAEFLPLLSGEIRVFDMYIDQP 110 + + + +++ I + D + K + + + LPL ++ + ++ + Sbjct: 56 VRLAFPLDLSMENVLIIRPNDSLPQMKDTIGFAQRMVADVQLLPLFKKKVEIDELKFEGL 115 Query: 111 HLN--------FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI--------IDQ 154 HLN + G V ++K+ ++ ++ + Sbjct: 116 HLNSSDFIAAAHVRGTIGQLALVSH-GIDISGSVVNVDKLALEDAKLVVTLPDTVPEDTS 174 Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF---KITANFP 211 +S ++ ++ +LQ+ + + P ++ + G Sbjct: 175 QSKSIWKINVDDLQVRHTDVTVHFPGDTLQVRTYL---GKAKVSKGFFDLGEGNYQVGRF 231 Query: 212 AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL----ELSA 267 L ID N + I + + + + + Sbjct: 232 -DWTDGELNYDNKWKGRTKGIDYNHLALSNIEVGIDALQYHASKLKLNVRQMAFKERSGF 290 Query: 268 KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN-LLNFSENGAESMH 326 +LSG + + + + K+++ N D D ++ LN + + + + Sbjct: 291 DLQKLSGALALDSTKLYMRQVKMRTSSSNLLADVDMDLNSFSNQNPGKLNLTLHASLGKN 350 Query: 327 DL 328 DL Sbjct: 351 DL 352 >gi|91775709|ref|YP_545465.1| hypothetical protein Mfla_1356 [Methylobacillus flagellatus KT] gi|91709696|gb|ABE49624.1| protein of unknown function DUF748 [Methylobacillus flagellatus KT] Length = 1181 Score = 59.9 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 54/352 (15%), Positives = 123/352 (34%), Gaps = 38/352 (10%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPS 63 L+ LGF S +L G F + + A + ++ V+ ++ P + Sbjct: 20 FLMVLGFWVSYLLFGYFAINPI-----AQRLLPWVAENKLASRLQVE---RVDYDPLRIA 71 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 + +++ E S + E L E L R+ D+ + PH++ + G SN Sbjct: 72 LTVNQLQLTTPEGVS-LAGFERLHADLELSGLFRLAWRLKDIQLSAPHVSVEVLPGGESN 130 Query: 124 WF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF--LSDLNLQISA- 171 W + + + ++++ I ++ G I+ +D + + L L L++ Sbjct: 131 WAKLIAKLNENPDEEKSEGMTRLLVDHILIERGDIEYMDHNRPEPFRAVLEPLGLELDGF 190 Query: 172 -----RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL----KIQ 222 + + G++ +G + S+ K+ K + + + Sbjct: 191 STLPEDLGDYAILAKLPEQGGTLKWKGELGLNPMVSSGKVELEGLKLAKLLEVLPPEALP 250 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIY---SGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 + A + L E +P + ++ + LL + K L + Sbjct: 251 VKLEAGLLRTRLDYQFALVEDKPEATIRNFSLALDEAAATLLQSQAQQGKVALK-QLAVE 309 Query: 280 DGNVRISRYKLQSILPNS-STDEDNKTKVSQDEENLLNFSE-NGAESMHDLN 329 +++ + ++ D K++QD++ LL+ A+ DL Sbjct: 310 LPSLQFRMNDQAQMQFDALKLVLDG-LKLAQDDKPLLDLPAVTVADVALDLQ 360 Score = 41.0 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 88/291 (30%), Gaps = 33/291 (11%) Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 + +++ Q D + +++ L L + ++ + I+Q + Sbjct: 325 FDALKLVLDGLKLAQ--DDKPLLDLPAVTVADVALDLQARKLDIGSFSIEQGEVKAVRQR 382 Query: 119 KGVSNW--------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 G NW + + ++ L + + G ++ D+ + Sbjct: 383 DGSVNWQQLHIAPEQPEQQPAEVEPDAEAAVDTETPWSIHLNQARIDGLKLDYQDETFKR 442 Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218 ++ L ++ F + ++S++GS+ + + + + Sbjct: 443 PLQVAADKLSLNLAFASEQGNSRVESLQGSIGP-FSVRSGANGKPVARLESLVLQGGQVD 501 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN--F 276 L + L ++ L ++ + KQ + + A + +A+ +G + Sbjct: 502 LAARQAGLEALVLKGLSADVLRDAKQVNWQAILEPAQSSTSQKTQPKTARAEPGTGEAPW 561 Query: 277 KISDGNVRISR--YKLQSILPNSSTDEDNKT------KVSQDEENLLNFSE 319 I + NS D + VS D + L S Sbjct: 562 AFDLKRFAIEDAGLHFRDQSANSPVALDIENANLEVKDVSLDTKRALPVSL 612 >gi|300937359|ref|ZP_07152195.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 21-1] gi|300457578|gb|EFK21071.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 21-1] Length = 1263 Score = 59.9 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G N S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTLSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|124025356|ref|YP_001014472.1| hypothetical protein NATL1_06451 [Prochlorococcus marinus str. NATL1A] gi|123960424|gb|ABM75207.1| conserved hypothetical [Prochlorococcus marinus str. NATL1A] Length = 1319 Score = 59.9 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 38/297 (12%), Positives = 88/297 (29%), Gaps = 14/297 (4%) Query: 7 IGLGFLFSVV--LVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 GL F+ + ++ L +D + F E+ + +G + + + Sbjct: 13 WGLAGTFAALGGVLIWSGADLLVDRTISRFSPQIEKTLSNSLGHPLKIGSYRGLRPW--- 69 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 V R+ S I L+++ L V + + G Sbjct: 70 GVELGPTRLLPGIKDSSSVNISNLTIKFAPFASLLNWKPVAIFNPKGTEIILNKNDTGSF 129 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 W + N+ L+ + +I + L+ NL ++ I +++ Sbjct: 130 -WVVPQKDNPKQINLQLKFNLKEPTKIVF---NAGDTTLLAKGNLSLNLGEKKIFGAINL 185 Query: 183 DSI-KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S +GS+ G G +D K+ N + + + I+ L Sbjct: 186 ESKEQGSLYLSGKGYWDGIEFQTKVKINKLSLSIFERILGNNSNFIAEGNINGSLKLGVK 245 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 + +G + K L + + + + +++ + S Sbjct: 246 KGLIRCNGGLLLNNLTLKGGPLSDTLSTN--NSKIECDKNKLKLIDSNWNYGYWDIS 300 >gi|195939443|ref|ZP_03084825.1| hypothetical protein EscherichcoliO157_24033 [Escherichia coli O157:H7 str. EC4024] gi|261228250|ref|ZP_05942531.1| conserved membrane protein, predicted transporter [Escherichia coli O157:H7 str. FRIK2000] gi|261255106|ref|ZP_05947639.1| conserved membrane protein, predicted transporter [Escherichia coli O157:H7 str. FRIK966] gi|320640037|gb|EFX09618.1| hypothetical protein ECO5101_00478 [Escherichia coli O157:H7 str. G5101] gi|320645607|gb|EFX14616.1| hypothetical protein ECO9389_08277 [Escherichia coli O157:H- str. 493-89] gi|320650917|gb|EFX19374.1| hypothetical protein ECO2687_14529 [Escherichia coli O157:H- str. H 2687] gi|320656298|gb|EFX24210.1| hypothetical protein ECO7815_19119 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661988|gb|EFX29396.1| hypothetical protein ECO5905_12963 [Escherichia coli O55:H7 str. USDA 5905] gi|320666822|gb|EFX33801.1| hypothetical protein ECOSU61_06815 [Escherichia coli O157:H7 str. LSU-61] Length = 1263 Score = 59.5 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|331654843|ref|ZP_08355843.1| conserved hypothetical protein [Escherichia coli M718] gi|331048225|gb|EGI20302.1| conserved hypothetical protein [Escherichia coli M718] Length = 1266 Score = 59.5 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 FRTNTPITSGGSDDSLEASHISELFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK 304 + S +P++ D K Sbjct: 295 WQFS-------IPDTRITMDGK 309 >gi|320106397|ref|YP_004181987.1| hypothetical protein AciPR4_1165 [Terriglobus saanensis SP1PR4] gi|319924918|gb|ADV81993.1| protein of unknown function DUF490 [Terriglobus saanensis SP1PR4] Length = 1453 Score = 59.5 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 34/288 (11%), Positives = 87/288 (30%), Gaps = 22/288 (7%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWT-DFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 +L L LF +++ G D+ + G K+ + + + Sbjct: 27 WILGSLFVLFLLIVGGLAWYSTTSDFDRRVSAILVKTLEDATGGKVDLA-HTRFSL-RHL 84 Query: 63 SVFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGE--------IRVFDMYIDQPHL 112 +V + I + D + ++ + +R L I + + ++QPH+ Sbjct: 85 AVEADGLVIHGLEGPDQAPYIAVDKILLRVTIKNFLWHAAGKGAIKYISLDMLRVEQPHI 144 Query: 113 NFYLSSKGVSNWFQRKSTM-------DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 + ++ G +N + K+ D + ++ + + G + + D+ DL Sbjct: 145 HLIVNKDGTTNQPEPKTKSTSNEPVLDTLLDLQAHTVELVNGVVLMNDRAIPFDLAARDL 204 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 + + + LS+ + R + + SL + Sbjct: 205 GVSLRYLPKSDHYGLSVGISDLRTKMQ-QEPEAKSRLQLEAELGRKLIELS-SLTLDTGK 262 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS 273 ++ ++ N + G + L + L+ Sbjct: 263 DSHLLVSGKIENFDNPAWEAGIKGDIEIPQISVLSGFPGLKGGRVNLN 310 >gi|293449570|ref|ZP_06663991.1| hypothetical protein ECCG_02604 [Escherichia coli B088] gi|291322660|gb|EFE62089.1| hypothetical protein ECCG_02604 [Escherichia coli B088] Length = 1263 Score = 59.5 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|72381865|ref|YP_291220.1| hypothetical protein PMN2A_0025 [Prochlorococcus marinus str. NATL2A] gi|72001715|gb|AAZ57517.1| conserved hypothetical protein [Prochlorococcus marinus str. NATL2A] Length = 1319 Score = 59.5 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 94/297 (31%), Gaps = 14/297 (4%) Query: 7 IGLGFLFSVV--LVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 GL F+ + ++ L +D + F E+ + +G + + + Sbjct: 13 WGLAGTFAALGGVLIWSGADLLVDRTISRFSPQIEKTLSNSLGHPLKIGSYRGLRPW--- 69 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 V R+ S I L+++ L V + + G Sbjct: 70 GVELGPTRLLPGIKDSSSVNISNLTIKFAPFASLLNWKPVAIFNPKGTEIILNKNDTGSF 129 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 W + N+ L+ + +I + L+ NL ++ I +++ Sbjct: 130 -WVVPQKDNPKQINLQLKFNLKEPTKIVF---NAGDTTLLAKGNLSLNLGEKKIFGAINL 185 Query: 183 DSI-KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 +S +GS+ G G +D K+ N + + +I + ++ G+L Sbjct: 186 ESKEQGSLYLSGKGYWDGIEFQTKVKINKLSLSIFE--RILGNNSNFIARGNINGSLKLG 243 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 K+ + + + L+ LS S + + +++ + S Sbjct: 244 VKKGLIRCNGGLLLNNLTLMGGPLSDTLSTNNSKIECDKNKLKLIDSNWNYGYWDIS 300 >gi|330807540|ref|YP_004352002.1| hypothetical protein PSEBR_a832 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375648|gb|AEA66998.1| Conserved hypothetical protein; putative exported protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 1267 Score = 59.5 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 30/254 (11%), Positives = 79/254 (31%), Gaps = 20/254 (7%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHIL-PFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 +R + E +A+ +G + + G + P + +D+ + + G ++ + Sbjct: 43 YRAEVETRASAALGMPVHI-GSLDGSWSALAPILAARDVVVGE---GPNALHLDQVRAVP 98 Query: 91 EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI--LEKIHVKGG 147 + LL+ ++R+ + + ++ + G D + LE++ V Sbjct: 99 DLWDSLLARQVRIAHLEVSGLKISLKEGADGKWALEGLPVKDDQPLDPQQLLERMQVV-S 157 Query: 148 RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKI 206 + ++D + L LS+ + + D + A + Sbjct: 158 KFSLLDSQVT-------LQPVEQPPLTLTYVGLSLRTGATRQRLDVRLTLPDGQPVAINL 210 Query: 207 TA---NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL 263 KN + L + + WN + G F ++ + + Sbjct: 211 RTRIRASDWKNGQADAYLSLPQSDWSKWLPKRLTQQWNFSRIKAGGEFWLSWGDGTVQSA 270 Query: 264 ELSAKKSRLSGNFK 277 + + G + Sbjct: 271 AMRLNAPDILGAYA 284 >gi|121602992|ref|YP_980321.1| hypothetical protein Pnap_0074 [Polaromonas naphthalenivorans CJ2] gi|120591961|gb|ABM35400.1| conserved hypothetical protein [Polaromonas naphthalenivorans CJ2] Length = 433 Score = 59.5 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 35/284 (12%), Positives = 77/284 (27%), Gaps = 11/284 (3%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89 + + +G + V G + + P P+V +++ Q + +I+ L+ Sbjct: 33 EELAARASAELEAALGVPVRV-GALHWRLRPTPTVVIEEVATGQPQP----IEIKRLTAH 87 Query: 90 AEFLPLLSGEIRVFDMYIDQPHL-NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR 148 L ++V + L L G + ++ G Sbjct: 88 LNTSALWQRRMKVDLAVVQGAVLPQLSLRGLGRKPAAAEAGPAREFTLDEVPMARIEFGD 147 Query: 149 IKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208 + I + +V + + + + R S + G D I Sbjct: 148 VTWISRHGIRVVYEGEADFDAAWRPRTARLRRPQTSPPADLALARKGQDDRWEVRSHIGG 207 Query: 209 NFPAKNKAI----SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE 264 + ++L P I++ L ++ I +G S Sbjct: 208 GTADGELLLHTSGQGGLRLTGQLQPRHIEVASALQAFNRRAIIAGKAS-GETTLSASGAT 266 Query: 265 LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308 L S G + R+ L + + +T + Sbjct: 267 AGELARSLHTTTSFSMGRSTLLRFDLDKAIRSLGQAHAGQTPLD 310 >gi|258405411|ref|YP_003198153.1| hypothetical protein Dret_1287 [Desulfohalobium retbaense DSM 5692] gi|257797638|gb|ACV68575.1| protein of unknown function DUF748 [Desulfohalobium retbaense DSM 5692] Length = 1080 Score = 59.5 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 80/311 (25%), Gaps = 36/311 (11%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81 P +D R A VG + + + + ++ + + + E G Sbjct: 127 GAPFTLDLNGMR------AATRVGLERSSEPDSSWMPVVNATLAISECTLSEPEHG-TVV 179 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-----------FQRKST 130 + ++ E L V + + P G NW Sbjct: 180 SLASGAVELERFAPLEKTATVNAISLQAPFAKVVRRGDGNLNWAGYFVASASANATAPDP 239 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS-DLNLQISARFLNIISPLSIDSIK--- 186 L V G + D+ LN +S SP S + Sbjct: 240 PSSPFAFSLASFTVANGIARFEDRSVASTIEKRVALNATLSDLSTTASSPASFQARARTK 299 Query: 187 --GSVIAEGTGNFDNKRSAFKITANFPAKNKAI-------SLKIQLFPLAYPIIIDLFGN 237 ++ +G + + F + +L +L Sbjct: 300 AGETIEVKGDLRLAPALAT-NGSLAFDGVSLPHYGPYYQPALPFELASGQVQGRTTFRFA 358 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSA----KKSRLSGNFKISDGNVRISRYKLQSI 293 +E+ + +++G + L + + +G ++ V I+ LQ Sbjct: 359 PESDEQLHLAGSDLAISGLSLRDPQLGTELFSLPQANVTNGTVRLDGQAVHIAAVDLQGG 418 Query: 294 LPNSSTDEDNK 304 + D + Sbjct: 419 KVHLQRHADGQ 429 Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 29/361 (8%), Positives = 97/361 (26%), Gaps = 62/361 (17%) Query: 49 AVKGGIKIHILP---------FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE 99 V+G P + + + + G+ + ++ + L Sbjct: 348 QVQGRTTFRFAPESDEQLHLAGSDLAISGLSLRDPQLGTELFSLPQANVTNGTVRLDGQA 407 Query: 100 IRVFDMYIDQPHLNFYLSSKGVSNWFQR----------------------KSTMDMIHNV 137 + + + + ++ + G + + K+ V Sbjct: 408 VHIAAVDLQGGKVHLQRHADGQLHLMRLLGEVGSQKASTATSAHAGAGRDKADASPAWRV 467 Query: 138 ILEKIHVKGGRIKIIDQESDQ--VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195 +++ + ++ D+ + + +SD++L + + +PL + ++ GS+ G Sbjct: 468 RVQESTLADWTVRWQDEAAPRPDALTVSDIDLALRHIDSALATPLEL-ALSGSLNTGGNL 526 Query: 196 NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255 D +T + ++ + + + L +G + + Sbjct: 527 TLDGNLDPKTLTGTGSFALNDLDIRAGRMYVPGSMQLSLR------RGVVDGTGTWKLR- 579 Query: 256 DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE---- 311 +LSG+ + + ++ T+++ + Sbjct: 580 --------PGDGIAPQLSGDLALKE---------FEAGASGDPDTLLGVTRLACNGFSVA 622 Query: 312 ENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371 + + + + + + + + + S QE Sbjct: 623 LPEQAITIRKVQLVEPYADLKVNANGRLNLRTVFSGEPAHETNATRSATPRASDTSAPQE 682 Query: 372 N 372 N Sbjct: 683 N 683 >gi|291461028|ref|ZP_06026519.2| UbiD family decarboxylase [Fusobacterium periodonticum ATCC 33693] gi|291379376|gb|EFE86894.1| UbiD family decarboxylase [Fusobacterium periodonticum ATCC 33693] Length = 1502 Score = 59.5 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 45/378 (11%), Positives = 133/378 (35%), Gaps = 23/378 (6%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70 +++ + + + ++ + E+ ++ + ++ ++ I + K+I Sbjct: 23 ISIPLIVATVLGLIITVALSNLEKIVEKVSSRYINGRVHIE-DINLSFSEP---VIKNIT 78 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 + E+ + + + + F LLSG I ++ +D +N GV N+ + Sbjct: 79 LYDNEN-NVMFNSDKVMAKISFKNLLSGRI--DELNVDSASVNVVRDKDGVINFTKLSKK 135 Query: 131 MDMIHNVI-LEKIHVKGGRIKIIDQESDQVYF--LSDLNLQISARFLNIISPLSIDSIKG 187 ++K+ + RI D + +++ + A ++ I Sbjct: 136 KSDKKPSNPIDKLVLTSARINYEDYSFLDKLEKKIENIDATVIADKEKLVKNADISITDE 195 Query: 188 SVIAEGTGNFDNKR----SAFKITANFPAKNKAISLKIQLFPLAYPII-IDLFGNLFWNE 242 ++ T ++ + K+ + +K + + I++ +L Sbjct: 196 NIKLNTTFKDESNKELSSLEMKLKIDKFLLDKDLLKSLAKNNEKLEFSDINISSDLLIKT 255 Query: 243 KQPIYS----GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG--NVRISRYKLQSILPN 296 + + + G V + +++ K +L+G F DG + ++ + + Sbjct: 256 DKTVKNTNIVGNLDVESPLFRYADVDSDIKNIKLAGVFDGRDGEAKLDLNVFDKDRNITV 315 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356 + DE+ + ++ D+ + ++ L+ + E+ K + ++ I + Sbjct: 316 TYQDEELNSVINIDKIDESILNKIKPIRDKKLDLKNINIEDIKTVVHYSDERGLIVKTTM 375 Query: 357 KKEEKDNSHDKENQENFS 374 K D+ +F+ Sbjct: 376 KTN--DSEFKGIELNDFN 391 >gi|218248931|ref|YP_002374302.1| hypothetical protein PCC8801_4219 [Cyanothece sp. PCC 8801] gi|218169409|gb|ACK68146.1| protein of unknown function DUF490 [Cyanothece sp. PCC 8801] Length = 1846 Score = 59.5 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 24/290 (8%), Positives = 76/290 (26%), Gaps = 10/290 (3%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE 84 F E Q + + + + + + V F I + + Sbjct: 53 WFFLQRQLTPLVEDQLSNFLNRPVKLG---SVQYFSLNRVRFGSSEILTTATDPAQVSMV 109 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV 144 GL + + + L+ + + P++ +G + + + L+ + Sbjct: 110 GLEVDYDPIKLILTQKLEIGITAIDPNVYLKQGKQGNWILTEFDAVKPNNP-IKLKSLRF 168 Query: 145 KGGR-IKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203 + + + + + + Q+ + G +++EG + Sbjct: 169 RNAQGLLLANSATGQIPEPVKFEKLSGQTDFINNRENIKFKVDGQLVSEGKFKVSGVANP 228 Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIII---DLFGNLFWNEKQPIYSGVFSVAGDFSKL 260 + + + + P+ L NL + + VA Sbjct: 229 KTQETKLLVQGNRLGVTEVDHLIDLPLDFQAGKLDANLEVTLRSQQLPLLQGVANLEQVT 288 Query: 261 LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD 310 ++ + G + + + + + + K + + Sbjct: 289 AKIDNFPHVLQTQGTLRFQGTAIYFDKVGTRFGAIDG--ITEGKLDLKKG 336 >gi|148977846|ref|ZP_01814401.1| hypothetical protein VSWAT3_10008 [Vibrionales bacterium SWAT-3] gi|145962915|gb|EDK28186.1| hypothetical protein VSWAT3_10008 [Vibrionales bacterium SWAT-3] Length = 1290 Score = 59.5 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 30/351 (8%), Positives = 96/351 (27%), Gaps = 30/351 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTV-PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59 +LR L + L + + T+ + ++ + E G + +++ Sbjct: 8 ILRACLWLVVTLLVTLAIAVTTLRVALPNLNKYQSEIELWVNQHSGFEFSIQDVGGFWRN 67 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSS 118 PS+ + ++ +E + + + + L V D+ ++Q +L+ Sbjct: 68 THPSIALQGVKASLPNAEDVTFSVERVEVEFDLIQSLVQMRPVVADLVMNQMYLDIRSID 127 Query: 119 --KGVSNWFQRKSTMDMIHNVI---------LEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 G + + K + + L + K I SD+ L L Sbjct: 128 LFAGQNETDKPKDSGSSKRVMNELDNLLLKTLVDVTAKDSTILYR-AVSDEERQLDIETL 186 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 + + ++ + N ++ + + + ++ Sbjct: 187 KWQNSGKHHLAEGVVSIK--------DANLNSLSVSANFIDGGSLTDVTGEFYVSADNIS 238 Query: 228 YPIIID--LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 + + + ++ +E+ + + + K + + Sbjct: 239 IKPWLTRYMQAESGIETGTVSLNSWLTLRNSKPVSAYVEVLPSELTWNEDGKHD---LML 295 Query: 286 SRYKLQSILPNSSTDEDN---KTKVSQDEENLLNFSENGAESMHDLNETDF 333 + + + + L+ + + LN ++ Sbjct: 296 ESGVFKLSPIDDGWQVNGHSLNLRTDDMPWPELDVAFKWQQGPWQLNVSEL 346 >gi|312130973|ref|YP_003998313.1| hypothetical protein Lbys_2283 [Leadbetterella byssophila DSM 17132] gi|311907519|gb|ADQ17960.1| protein of unknown function DUF490 [Leadbetterella byssophila DSM 17132] Length = 1594 Score = 59.5 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 35/322 (10%), Positives = 90/322 (27%), Gaps = 21/322 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWT----DFREDFERQATLIVGKKIAVKGGIKIH 57 +R+ L G V+L + L+ + T + + +G ++G + Sbjct: 6 IRKTLKVFGISILVILGAMVAILLYFNSTPGQKKLSDLIFNGLSKKIGTP--IEGRLSFS 63 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 + + V + I + + + + LL E+ + + ++ + Sbjct: 64 LPDW--VQLDQLLIRDLSN-DTLVYAQRAHLDVALMKLLHNELYIEQVELENAVVKLKK- 119 Query: 118 SKGVSNWFQ----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 N+ K T + L + +K ++ DQ+S Q + + L Sbjct: 120 KDEAFNFDFILNAFASEPTPKDTNSSSLKINLTGVDLKSIKVDYDDQDSGQRFLVHLGLL 179 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 L++ G+ + S ++ + ++ + Sbjct: 180 NTGFDVLDLEKSRFDLKPLLVENLYVQGSL-GQSSTDTSSSGVLPDIRLKTIDAKNLNWN 238 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 + + L K LN A ++ G + S Sbjct: 239 FDLGEQLTKGQNVALHLEPKDINLPQLEVDVKALNAGFDAISFAQKNPQRVPQGEINYSD 298 Query: 288 YKLQSILPNSSTDEDNKTKVSQ 309 +L + ++ ++ Sbjct: 299 LELTKGSIDLENVVYSEGNLAL 320 >gi|182414079|ref|YP_001819145.1| hypothetical protein Oter_2262 [Opitutus terrae PB90-1] gi|177841293|gb|ACB75545.1| conserved hypothetical protein [Opitutus terrae PB90-1] Length = 413 Score = 59.5 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 35/249 (14%), Positives = 77/249 (30%), Gaps = 16/249 (6%) Query: 16 VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE 75 +L +P + R + I G V I I + + + + I + Sbjct: 30 LLAVRIALPYVV-----RNQVNHRLQSIPGYTGHVA-DIGIALWRG-AYALEGVEIYKVS 82 Query: 76 DG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM-- 131 + + + + L G+I D+ +++ L F + + Sbjct: 83 GEVRTPFVRARTIDFSVAWRDLFHGKIV-SDILVEEGQLTFVAGATEAESQTDVDRRWQE 141 Query: 132 --DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189 + + + + + V G ++ D L NL+++A L S + + Sbjct: 142 VIEDLFPLEITHLEVNHGLLRYQDTTKTPAVDLFVTNLRLAATGLRNRPSESGEEFPAEI 201 Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP-IIIDLFGNLFWNEKQPIYS 248 + EG + + I+A A L +L + P + L + + Sbjct: 202 VLEGD-SLGGGQLRLAISAEPLAAQPHFHLSAKLENVNLPELNESLKAYANVDVSRGKME 260 Query: 249 GVFSVAGDF 257 +AG Sbjct: 261 LAAEMAGKD 269 >gi|213622241|ref|ZP_03375024.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 446 Score = 59.5 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 22/205 (10%), Positives = 56/205 (27%), Gaps = 41/205 (20%) Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + D + + + V G + + E+D + D+ L + + + Sbjct: 22 DNTLPDVAEDRGWSFDIRSLRVA-GSVLVFQHENDDQVTVRDIRLNMEQDAEHRGT---- 76 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242 F N ++ A+S + YP N Sbjct: 77 -------------------FDFSGRVNRDQRDLALSFSGTVDASDYP----------HNL 107 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 I + + G +E + +L ++ + + + L + + + Sbjct: 108 TAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA----NDSSLT 160 Query: 303 NKTKVSQDEENLLNFSENGAESMHD 327 +V+ E+ ++ D Sbjct: 161 GHVQVTLAEQPEWQIDLRSSKLNLD 185 >gi|332998366|gb|EGK17965.1| hypothetical protein SFVA6_4169 [Shigella flexneri VA-6] Length = 1266 Score = 59.5 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 40/342 (11%), Positives = 94/342 (27%), Gaps = 36/342 (10%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166 + G S+ S + + + ++ + + L+ LN Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQSAELAIPQLTWLN 174 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223 R ++S S+ G + D S ++ + L +Q Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234 Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 L G + ++ G + L+ + + Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294 Query: 283 VRISRYKLQSILPNSSTDEDNK----TKVSQDEENLLNFSEN 320 + S +P++ D K ++ + Sbjct: 295 WQFS-------IPDTRITMDGKPWPSGALTLAWIPEQDVDGK 329 >gi|83310887|ref|YP_421151.1| hypothetical protein amb1788 [Magnetospirillum magneticum AMB-1] gi|82945728|dbj|BAE50592.1| Uncharacterized protein involved in outer membrane biogenesis [Magnetospirillum magneticum AMB-1] Length = 845 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 81/317 (25%), Gaps = 72/317 (22%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGL 86 +D +R E +A+ ++ +K+ V G I + ILP P+V + +D + ++ + Sbjct: 1 MDGEAWRGRIEAEASALLRRKVTVAGPIALRILPSPAVTLASVAVDGT------AALDRV 54 Query: 87 SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG 146 + LL+G + D+ I+ Sbjct: 55 RVGLSLGALLAGRPELTDLVIEG------------------------------------- 77 Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKI 206 + L LNL+ + E G Sbjct: 78 ----------GRAGPLDGLNLRATMTGETFAVRGEAKLWGRPATLEAQGR---------- 117 Query: 207 TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS 266 P+ LK ++ + G + S+A + +L Sbjct: 118 ---RPSGEAMAPLKAKVAQPSLESEASFEGTFG--KSGVTGKIDLSLASLSRAAGSDQLP 172 Query: 267 AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 ++S V IS + + S L++ + Sbjct: 173 DAPLSAQAELRLSPDEVVISDL----GIILGESTITGSVVASLTAPALMDITLRADSFDL 228 Query: 327 DLNETDFFEEEEKKNKN 343 D + + + Sbjct: 229 DTRRPAATAQAPTQPQK 245 Score = 41.0 bits (94), Expect = 0.33, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 69/229 (30%), Gaps = 14/229 (6%) Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSDLN--LQISARFLNII 177 Q + + +V L V GR + + L +L L+I + I Sbjct: 307 RLTLSQASARLPGAGSVKLTGAMVTPEGRPRFDGTLKAESRNLPELRKWLRIGSAATPIR 366 Query: 178 SPLSIDSIKGSVIAEGTG---NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 L + D +R I+A I LK +L + D Sbjct: 367 GKLESKVQVTDSRLSLNALTLDLDERRITGMISAGLAQ---PIPLKAELGLPGLALGFDG 423 Query: 235 F-GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 G+ + + F+ A + +S + S+G + +S + ++ Sbjct: 424 TLGDGRLEGGASLRAAGFAQAIRALAPGYRPRGNGELAVSARVEGSEGRITLSELQAKAG 483 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342 K +S + L S +G D ++ +++K Sbjct: 484 DA----LVTGKASLSLEASPKLTASLSGNAIALDPFLPAEASDKAEESK 528 >gi|87303290|ref|ZP_01086083.1| hypothetical protein WH5701_12568 [Synechococcus sp. WH 5701] gi|87282185|gb|EAQ74146.1| hypothetical protein WH5701_12568 [Synechococcus sp. WH 5701] Length = 1522 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 31/305 (10%), Positives = 87/305 (28%), Gaps = 20/305 (6%) Query: 29 WTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSM 88 + +R + +G + + + + R+ +++G+ + Sbjct: 47 YESWRPRLQVLIGRGLGHPVQLGPYEGLRPW---GLTIGPSRVLSGPADRSNLRLDGVGV 103 Query: 89 RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR 148 + L L+ V D+ LN +++G W + + L + K R Sbjct: 104 NLDPLASLAERALVLDLRPRGAQLNLIPNARGQL-WVFGPAGAKQPPRLTLNLLLEKPAR 162 Query: 149 IKIIDQESDQVYFLS-DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS--AFK 205 +++ D + L + + + G+ + G + + Sbjct: 163 LQLGSSALDLKVQGRAGVRLHRRSIDWRATARPRAQATAGAASSNGRALVRGSANWSSGA 222 Query: 206 ITANFPAKNKAISLKIQLFPLAYPIIID-----LFGNLFWNEKQPIYS--GVFSVAGDFS 258 + + ++ L P A P + G L S G + Sbjct: 223 VKVGLDLRRWDLAPLASLIPRARPPRLQSLKGTADGRLQLTRGSGSTSCRGSLRLGELEL 282 Query: 259 KLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFS 318 + L + RL+ + ++ +++ ++ + + L + Sbjct: 283 RDPLLPAPLQARRLAVACRGQQILLKGDPWQM------ANWRGTVRGSLEPGNRFDLRLT 336 Query: 319 ENGAE 323 + + Sbjct: 337 ASDPQ 341 >gi|297519111|ref|ZP_06937497.1| hypothetical protein EcolOP_15833 [Escherichia coli OP50] Length = 419 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLCIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMGLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|115374328|ref|ZP_01461612.1| hypothetical protein STIAU_3763 [Stigmatella aurantiaca DW4/3-1] gi|310818997|ref|YP_003951355.1| hypothetical protein STAUR_1724 [Stigmatella aurantiaca DW4/3-1] gi|115368638|gb|EAU67589.1| hypothetical protein STIAU_3763 [Stigmatella aurantiaca DW4/3-1] gi|309392069|gb|ADO69528.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 563 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 38/347 (10%), Positives = 100/347 (28%), Gaps = 41/347 (11%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR +L GLG L + L+ + ++ ++P Sbjct: 17 LRPLLWGLGALIVLELLYNSVLVT--------GLLATFLNRATHGHPSISWSRAWSLVPG 68 Query: 62 PSVFFKDIRIDQKEDGSFE--SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-LSS 118 V+ +++++ Q+++ +E +++ + LL + + I H+ + Sbjct: 69 -DVYVRNLKLRQEDERGGFWQLDLEDVTVDLSLVSLLRRRLEAESLDIRGLHVRISPAPA 127 Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + + + V+L + + + + +LN + + Sbjct: 128 EPEEDTSPKSLPSPDPWQVLLYGVRI---------------HEVRELNWKEVQLTGIQEA 172 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 S++ + G ++ A ++ A+ + S + L Sbjct: 173 SGSLELVPGHRVSAQNVQVRLGPGALRVQGETVARVEQGSAGFVIEALRQEPQGGFDLTG 232 Query: 239 FWNEKQPIYSGVF----SVAGDFSKLLNLELSAKKSRLSGNFKISDGNV--------RIS 286 E ++ + S++ ++ L L + ++ +G + S Sbjct: 233 GMKEGHLRFTAALPALEELKPLLSRITDVRLRGGAGSLEADVQVKEGRLAPGTVLKGAGS 292 Query: 287 RYKLQSILP--NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331 L S + + E A + ET Sbjct: 293 PVTLSSGPMHVTAPWKLLADAYPREGGETRFGLKLTLAPVRMEAGET 339 >gi|257061991|ref|YP_003139879.1| hypothetical protein Cyan8802_4258 [Cyanothece sp. PCC 8802] gi|256592157|gb|ACV03044.1| protein of unknown function DUF490 [Cyanothece sp. PCC 8802] Length = 1846 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 24/290 (8%), Positives = 76/290 (26%), Gaps = 10/290 (3%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE 84 F E Q + + + + + + V F I + + Sbjct: 53 WFFLQRQLTPLVEDQLSNFLNRPVKLG---SVQYFSLNRVRFGSSEILTTATDPGQVSMV 109 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV 144 GL + + + L+ + + P++ +G + + + L+ + Sbjct: 110 GLEVDYDPIKLILTQKLEIGITAIDPNVYLKQGKQGNWILTEFDAVKPNNP-IKLKSLRF 168 Query: 145 KGGR-IKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203 + + + + + + Q+ + G +++EG + Sbjct: 169 RNAQGLLLANSATGQIPEPVKFEKLSGQTDFINNRENIKFKVDGQLVSEGKFKVSGVANP 228 Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIII---DLFGNLFWNEKQPIYSGVFSVAGDFSKL 260 + + + + P+ L NL + + VA Sbjct: 229 KTQETKLLVQGNRLGVTEVDHLIDLPLDFQAGKLDANLEVTLRSQQLPLLQGVANLEQVT 288 Query: 261 LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD 310 ++ + G + + + + + + K + + Sbjct: 289 AKIDNFPHVLQTQGTLRFQGTAIYFDKVGTRFGAIDG--ITEGKLDLKKG 336 >gi|323970339|gb|EGB65609.1| hypothetical protein ERHG_03613 [Escherichia coli TA007] Length = 1263 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|326314954|ref|YP_004232626.1| hypothetical protein Acav_0133 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323371790|gb|ADX44059.1| hypothetical protein Acav_0133 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 458 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 108/319 (33%), Gaps = 24/319 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKKIAVKGGIKIHILP 60 LR L G+ +VL + ++ + A ++G + V ++ H+LP Sbjct: 24 LRWTLGGVAVAGVIVLAAGAALWWWLPSDEELARRAGDGAGDLLGVPVVVD-RLEWHLLP 82 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ---PHLNFYLS 117 P + + +Q+ + + A + LL + + + ++ P L+ Sbjct: 83 SPRLVLHGVHTEQEAP----VSADRIVADARWSDLLRLRLALARLRLEGAAVPQLSLSQF 138 Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGR---IKIIDQESDQVYFLSDLNLQISARFL 174 + L ++ V+ ++ I ++ + + ++ + R Sbjct: 139 K----VRDAGQDGPASFGPFTLAEVPVERAEWQGVRWIGRQGRDLAYGGSVDFGAAWRPA 194 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 + + S + E G+ D R +TA + + L+ +D Sbjct: 195 HGLLEREGASPPARLAIEREGSED--RWRADVTAGGRTERGELRLQEFGERYRVTGSLDF 252 Query: 235 F-----GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 G + E++ I SG S + +A L + ++ + Sbjct: 253 SGVDVVGVMDAFERRSIVSGQAS-GHTDLIAEGDDPAAAMRALQTRTSFTVARAKLLTFD 311 Query: 290 LQSILPNSSTDEDNKTKVS 308 L++ + ++ +D+ T++ Sbjct: 312 LEAAIRSAGSDKGGTTQLD 330 >gi|300928721|ref|ZP_07144239.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 187-1] gi|300463310|gb|EFK26803.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 187-1] Length = 1263 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|149189083|ref|ZP_01867371.1| predicted membrane protein [Vibrio shilonii AK1] gi|148837046|gb|EDL53995.1| predicted membrane protein [Vibrio shilonii AK1] Length = 1297 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 39/325 (12%), Positives = 97/325 (29%), Gaps = 32/325 (9%) Query: 15 VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74 V V +P + + G I++K PS+ + + + Sbjct: 26 AVTVLRVGLPQL---NKIQPEIVTWVNQGTGLNISLKDVRGFWRNTHPSISLQGVVVGLP 82 Query: 75 EDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFY--------------LSSK 119 E + ++ L + + + ++ + + DM I+ L+ + Sbjct: 83 ESPETKFEVGNLELEFDLIQTIIQRQPVLADMVINDMMLDIRSVDLLKATEPKTVSQPKQ 142 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 ++ Q + +D + L++ V + S + L NLQ + ++ Sbjct: 143 PAASGEQLVNRLDNLLLRQLDRFAVANSTVLY-QSISGEERQLDIENLQWRNQKARHLAQ 201 Query: 180 LSIDSIKGSVI-AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 +I ++ E +F +K S ++ +F +SL L G + Sbjct: 202 GTISIADANLNSLEVRADFIDKGSLSNVSGDFYVAVDQMSLSPWLSETQKQQTGIKDGEV 261 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 + L + S G D ++ + + + ++ Sbjct: 262 SL-----RSWITLDNSTAKEAYLEVLPSELSWSKDGK----DHDLFVESAVMHLLPSDAG 312 Query: 299 TDE---DNKTKVSQDEENLLNFSEN 320 + K + + L+ + Sbjct: 313 WQLNVHEVKARTNDVPWPELDIAAE 337 >gi|84394051|ref|ZP_00992788.1| hypothetical protein V12B01_10442 [Vibrio splendidus 12B01] gi|84375337|gb|EAP92247.1| hypothetical protein V12B01_10442 [Vibrio splendidus 12B01] Length = 1289 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 28/329 (8%), Positives = 85/329 (25%), Gaps = 29/329 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTV-PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59 +LR L + L + + T+ + ++ + E G +++ Sbjct: 8 ILRACLWLVVTLLVTLAIAVTTLRVALPNLNKYQSEIELWVNQHSGFDFSIQDVGGFWRN 67 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSS 118 PSV + ++ +E + + + + L V D+ ++Q +L+ Sbjct: 68 THPSVALQGVKASLPNAEDVTFSVERVEVEFDLIQSLVQMRPVVADLVMNQMYLDIRSID 127 Query: 119 KGVSNWFQRKSTMDMIHNV----------ILEKIHVKGGRIKIIDQES-DQVYFLSDLNL 167 N V L + K + D+ + L Sbjct: 128 LFAGNGTDEPKDPGSSKRVMKELDNLLLKTLVDVTAKDSSLLYRSVSGEDRQLDIDILKW 187 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 Q + + +SI N ++ + + + ++ Sbjct: 188 QNTDKHHLAEGVVSIK----------DANLNSLSVSANFIDGGSLTDVTGEFYVSADNIS 237 Query: 228 YPIIID--LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 + + + ++ +E+ + + + + + + Sbjct: 238 VKPWLTRYMQAESGVETGTVSLNSWLTLRNSKPVSAYVEVLPSELTWNEDGQHD---LML 294 Query: 286 SRYKLQSILPNSSTDEDN-KTKVSQDEEN 313 + + + + D+ Sbjct: 295 ESGVFKLSPIDDGWQVNGHSLNLRTDDRP 323 >gi|325860100|ref|ZP_08173226.1| hypothetical protein HMPREF9303_1082 [Prevotella denticola CRIS 18C-A] gi|325482385|gb|EGC85392.1| hypothetical protein HMPREF9303_1082 [Prevotella denticola CRIS 18C-A] Length = 1719 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 39/324 (12%), Positives = 91/324 (28%), Gaps = 41/324 (12%) Query: 2 LRRVLIGLGFLFS--VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIH 57 +RR L L + V+L L+ + + G ++++ + Sbjct: 12 MRRSLKWLVAAVATPVILFLILVGLLYCPPVQNWAVKQVAAYVSAHTGMEVSLD---HVS 68 Query: 58 ILPFPSVFFKDIRI-----DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112 + + +RI + + L + LPLL + V ++ + Sbjct: 69 LSYPLDLQLDGLRILRQNDSIPNRKDTVADMCRLVASVDLLPLLESRVEVNELTFMELKA 128 Query: 113 N-------FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII----------DQE 155 N + + + +V + K V+GG I + Q+ Sbjct: 129 NTVNFIGDLRIRGDLQRLHVVSHAVNLIGDSVRVNKADVEGGWIDVALGDTVPEDPNRQK 188 Query: 156 SDQVYFLSDLN-------LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208 + LN L + +++ + + KG+ + + ++ Sbjct: 189 PLWRVNIDRLNLSKTAFSLHLPGDTMSVHARFTKAVAKGTELLLHDNIYKVADLDWQGGT 248 Query: 209 NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268 +N ++ + G + P S A Sbjct: 249 FSYDQNYVRRVRQGFDAAHMAMRDVNIGIDSFLYAAPKLSLRVRTANFR-----ERSGLV 303 Query: 269 KSRLSGNFKISDGNVRISRYKLQS 292 + G F + ++R+ +LQ Sbjct: 304 LNDFRGAFAMDSTHIRLPGLRLQM 327 >gi|158333724|ref|YP_001514896.1| hypothetical protein AM1_0530 [Acaryochloris marina MBIC11017] gi|158303965|gb|ABW25582.1| hypothetical protein AM1_0530 [Acaryochloris marina MBIC11017] Length = 1728 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 95/306 (31%), Gaps = 29/306 (9%) Query: 14 SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73 + + ++ V FID D + + + + + + + + F I Sbjct: 35 AAIAGVSWWVLRFID-EDLTPLVAEELSKTLNRPVKMGEVQNYSL---THIRFGPSEIPA 90 Query: 74 -------KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126 ++ + +K+E + +R LP+L + + +P L + G + Sbjct: 91 CSPQQGCAKEDADSAKMEAVDIRFNLLPVLWSRKLPLEATLIKPQLYLDQTQDGEWIATR 150 Query: 127 RKSTMDMIH-NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 +S V L ++ V+ G +I + + S LN ++ + + + Sbjct: 151 LRSGPSKAWIKVKLNQLQVQQGTAQIE-PANIEARQFSQLNGTLNFSTPETLYFNTQSQV 209 Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 G + +K+ K + + Q L ++ L L + + Sbjct: 210 DSGGQLSVKGAWQSKQ-------------KKLEVNAQTKDLVAAPLMGLLPKLPFEINKG 256 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS---ILPNSSTDED 302 G F V + + A S+ V+ + + + P + Sbjct: 257 QLQGQFQVKLLPQHPVTIHSDATLSQGDIWIPRQAIRVQANNIRTDVRIEVPPQRPVELK 316 Query: 303 NKTKVS 308 + + Sbjct: 317 GEAYID 322 >gi|323961106|gb|EGB56720.1| hypothetical protein ERGG_02376 [Escherichia coli H489] Length = 1263 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|323941661|gb|EGB37840.1| adhesin HecA family protein [Escherichia coli E482] Length = 1263 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|323936270|gb|EGB32562.1| adhesin HecA family protein [Escherichia coli E1520] Length = 1263 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|300958277|ref|ZP_07170423.1| hypothetical protein HMPREF9547_03991 [Escherichia coli MS 175-1] gi|300315064|gb|EFJ64848.1| hypothetical protein HMPREF9547_03991 [Escherichia coli MS 175-1] Length = 1263 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|606186|gb|AAA58049.1| ORF_f282 [Escherichia coli str. K-12 substr. MG1655] Length = 282 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 36/286 (12%), Positives = 83/286 (29%), Gaps = 25/286 (8%) Query: 2 LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 +RR+ L+ G V+ +P +R + + G + Sbjct: 1 MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56 Query: 54 IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111 + P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114 Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQI 169 + G S+ S + + + ++ + + + + L Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 R +S+ S G R + N + L+ L Sbjct: 175 DPRRHRAEGLVSLSS------LTGQHGVMQVRMDLRDDEGL-LSNGRVWLQADDIDLKPW 227 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 + + N+ Q G ++ ++ L + +L G Sbjct: 228 LGKWMQDNIALETAQFSLEGWMTIDKGDVTGGDVWLKTGRCQLVGR 273 >gi|291614248|ref|YP_003524405.1| hypothetical protein Slit_1789 [Sideroxydans lithotrophicus ES-1] gi|291584360|gb|ADE12018.1| conserved hypothetical protein [Sideroxydans lithotrophicus ES-1] Length = 1009 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 32/293 (10%), Positives = 85/293 (29%), Gaps = 18/293 (6%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI 83 P D+ E++ + + + + + G + P + +++ + + E K+ Sbjct: 636 PYVYPLKDYIAPIEQRLSAQLKQPVHIGGMSAASL--PPRLQLQNVTMGNNQ----EVKV 689 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLN-FYLSSKGVSNWFQRKSTMDMIHNVILEKI 142 + + L L S + + ++ ++ ++ + S + I ++ L+ + Sbjct: 690 ASIVLNFAALSLFSDVKVISEADLNDVSIDGRVINKQAESLMLLGANAQYPIRHLNLQHV 749 Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202 + I + + ++S + + + I Sbjct: 750 KIVTDEITLPTMDGIADIDAHGAFSRVSLHSPDDKLGFDLQNNDNRWIVNVNLKESGLPM 809 Query: 203 --AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW-NEKQPIYSGVFSVAGDFSK 259 + N + A+ L G+ +K G Sbjct: 810 LPDLVFSDLSAKGNIGEGVVSFTELDAHIFNGILLGSAKLSWDKGWQLQGSLEAKTFDVD 869 Query: 260 LLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312 + +L + L+G S G V++S+ S D V + Sbjct: 870 KMYPKLHV-EGDLNGEGTFSMGGVKLSQL-------GDSPRLDGTFTVKKGTI 914 >gi|293416669|ref|ZP_06659308.1| hypothetical protein ECDG_03429 [Escherichia coli B185] gi|291432025|gb|EFF05008.1| hypothetical protein ECDG_03429 [Escherichia coli B185] Length = 1263 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|157372639|ref|YP_001480628.1| hypothetical protein Spro_4406 [Serratia proteamaculans 568] gi|157324403|gb|ABV43500.1| conserved hypothetical protein [Serratia proteamaculans 568] Length = 1291 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 33/329 (10%), Positives = 92/329 (27%), Gaps = 35/329 (10%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKG-GIKIHILPF 61 +L+ G V++ + ++R +A + G + + Sbjct: 27 ILLATGASLIVIVALLISGLRLALPELNNYRPQLLAKAESLSGVPVQIDFMQGSWETF-G 85 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG 120 P + +++R + +IE +++ + LL + D+ Q + + G Sbjct: 86 PQLEMRNVRATLPKSN---LRIERVTLALDVWQSLLHWRWQFRDLTFYQLQFDLNTTLGG 142 Query: 121 VSNWFQ--RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFL 174 + + + ++ +++ R+ + + L+ LN + R Sbjct: 143 EEHKGSTIEPGKISDLLLHQVDHFNLRDSRLSFLTPAGARAEFEVPQLTWLNGRDRHRAE 202 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 IS +++ G V + ++ +Q + Sbjct: 203 GQISLSTLNGQHGVVQLRMDLRDNQGLLNV------------GTVYMQADNIDMKPWFTR 250 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 + + +S + ++ K+ + N + + L Sbjct: 251 WLRANTGLESADFSLAAWLQIQNGEIAGGSALLKQGAANWNVGKQQHRLDVDNLALTLSR 310 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAE 323 + E LN + +G Sbjct: 311 QGTGWQV---------EVPQLNLATDGQA 330 >gi|256024181|ref|ZP_05438046.1| hypothetical protein E4_12454 [Escherichia sp. 4_1_40B] gi|300948325|ref|ZP_07162434.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 116-1] gi|301645524|ref|ZP_07245458.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 146-1] gi|307139933|ref|ZP_07499289.1| hypothetical protein EcolH7_17606 [Escherichia coli H736] gi|300452138|gb|EFK15758.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 116-1] gi|301076208|gb|EFK91014.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 146-1] Length = 1263 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 + +L+ G V+ +P +R + + G + + Sbjct: 1 MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56 Query: 57 HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114 P++ DIR + K+ G ++ +++ + LL + D+ Q Sbjct: 57 SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114 Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169 + G S+ S + + + ++ + + + L+ LN Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226 R ++S S+ G + D S ++ + L +Q Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234 Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L G + ++ G + L+ + + + Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294 Query: 286 SRYKLQSILPNSSTDEDNK 304 S +P++ D K Sbjct: 295 S-------IPDTRITMDGK 306 >gi|332143373|ref|YP_004429111.1| hypothetical protein MADE_1019955 [Alteromonas macleodii str. 'Deep ecotype'] gi|327553395|gb|AEB00114.1| hypothetical protein MADE_1019955 [Alteromonas macleodii str. 'Deep ecotype'] Length = 369 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 46/378 (12%), Positives = 112/378 (29%), Gaps = 27/378 (7%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 +R + L +++ +P + V G + + + Sbjct: 6 KRFCYVVAGLLLMLIAFRLYLPY-----AAATYINTTLSQSKQYDGRV-GDVDLMLWRG- 58 Query: 63 SVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF------ 114 + + + + + K + + + L G + ++ P +NF Sbjct: 59 AYSLEYVLLYKANGQIDKPLFKADYVEFTLSWSQLFKGAAVG-RVVVNSPEINFVDGNSE 117 Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 S G + + D + + ++K+ + G+I + ++ ++ ++Q+ L Sbjct: 118 EKSQSGKNENWLS--IADQLFPLRIDKLTINQGKIAFHNPDTSPAIDIALHDIQLEVNNL 175 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PIIID 233 LS D+ + A+G + N + L IQ + Sbjct: 176 VNSDDLS-DTRVATAKAKGQTAEQGT-ISLNAKLNPATEAPTFDLDIQADNVGLVNFKNL 233 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--RLSGNFKISDGNVRISRYKLQ 291 L ++ + + VA + K+ + S I ++ Sbjct: 234 LDTYAPFDLEAGTLTLAAEVASNEGKVKGYIKPILHNVEVFSWKGDIERDGDGFIEGSIE 293 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 +I + +N+++ ++ G S D D F K K D Sbjct: 294 AISAFVTELFENQSE----DQIATRIPIEGDLSNPDTQTWDAFTAILKNAFIKAFKGDVE 349 Query: 352 QYSVNKKEEKDNSHDKEN 369 + + E D + + Sbjct: 350 ESVELDRLELDRLENPKG 367 >gi|90022829|ref|YP_528656.1| exonuclease VII, small subunit [Saccharophagus degradans 2-40] gi|89952429|gb|ABD82444.1| conserved hypothetical protein [Saccharophagus degradans 2-40] Length = 1380 Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 86/305 (28%), Gaps = 23/305 (7%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPF 61 R + +V + F D+R + RQ + +G I + G + Sbjct: 26 RFWGTLFTIIIAVAVCVQLGREAFPLLNDYRTEISRQLSGTLGVDIKI-GEVAASWKGLT 84 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKG 120 P + D+ + K+ + KI+ S L ++ + DQ G Sbjct: 85 PKLNLIDVTVSNKD--TAVFKIKRASAELSLLDSIADWRFSWRRIAFDQFETTLTQDEAG 142 Query: 121 VSNWF--QRKSTMDMIHNVILE----------KIHVKGGRIKI-IDQESDQVYFLSDLNL 167 K + ++ +I + +I + + + ++L Sbjct: 143 HWGVAGIASKPSASGEPGFNIDDPLDVFLFGRRIDITDVKINLEFRTGHNTQLVVPKVSL 202 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNK-RSAFKITANFPAKNKAISLKIQLFPL 226 + F +++ L++D + G D + + F + + Sbjct: 203 ENDRDFHRLLAELNVDDEAEAFSLVVEGIGDPRNKETFHAKGYIALNQFPMEKVLAAVGA 262 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 + L W E G+ K ++ + L ++ Sbjct: 263 DFWQS---DEELAWKEG-HRLDLSAWFEGNTEKGISFKGMLISDGLPVKLPEDVQLPQLV 318 Query: 287 RYKLQ 291 + ++ Sbjct: 319 QSRVT 323 >gi|24374331|ref|NP_718374.1| hypothetical protein SO_2796 [Shewanella oneidensis MR-1] gi|24348880|gb|AAN55818.1|AE015718_10 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 1069 Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 36/371 (9%), Positives = 116/371 (31%), Gaps = 41/371 (11%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFK 67 + +++ + + + + ++G+ ++++G +HI PF V Sbjct: 21 ILVYLTIIYLSYLIALGLVLPKAIVAFAPEKISQVLGRPVSLQG---MHINPFNYRVNIN 77 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL---------- 116 + + +K + + + L F + + + + + + P N Sbjct: 78 QLAVKEKNN-QDFAGLAQLQFEVHFWQSVFNQALVIDHIQLQAPFANISRFQTPGGTQFN 136 Query: 117 --------SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 + + + +IL +++V + K D+ + + ++N + Sbjct: 137 FDDIITTLNQAKTPSESDTNTEQSRPLRIILGELNVSAAKFKFDDKITKALIDYPNINFK 196 Query: 169 ISARF------LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 +S N S S K +V + T + +A + + Sbjct: 197 LSQLDTEYLMLPNPASVAKTSSTKNAVTNKATPVTTAANTTPATSAANATTTIVHNQFVA 256 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL------NLELSAKKSRLSGNF 276 A+ + L G + + + N++L + + ++ Sbjct: 257 QLQDAHAGEVSLAGQFQLFPFKLVGDVQLAKLKLAPLWQFVADQFNVKLGTGELSIKAHY 316 Query: 277 KIS---DGNVRISRYKLQSILPNSSTDEDNK--TKVSQDEENLLNFSENGAESMHDLNET 331 ++ G ++++ + Q I+ + ++ + + +N + + Sbjct: 317 QVDLPEQGELQLTAERGQVIVEKVNLLNGDQSVITLPLLAVDGINVNLAKQRINIKQIHS 376 Query: 332 DFFEEEEKKNK 342 + + K ++ Sbjct: 377 EGLSLKAKLDE 387 >gi|77361592|ref|YP_341167.1| hypothetical protein PSHAa2677 [Pseudoalteromonas haloplanktis TAC125] gi|76876503|emb|CAI87725.1| conserved protein of unknown function [Pseudoalteromonas haloplanktis TAC125] Length = 1283 Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 40/356 (11%), Positives = 108/356 (30%), Gaps = 21/356 (5%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60 R++ + ++ V + + + D++++ E +++ G I Sbjct: 12 RKLWQTCAIILVLLAVTVSILKYTLPYANDYKDNIENYLHTKFDISLSI-GSISASWQGS 70 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPH-----LNF 114 P++ +++ + I S+ L +++ I+ H N Sbjct: 71 GPALVLENLSFKDNQTAPIALTIAKTSLELNLWESLKTLQLKSNYFVINGFHTSIKVANL 130 Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII-DQESDQVYFLSDLNLQISARF 173 + ++G ++ +K ++ + ++ I I + +++ L ++ Q + Sbjct: 131 FAKNEGEVSFE-QKELIEELFLGDTGHFAIENSSINFILEDGTERKLLLENIVWQNQNKQ 189 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSA-----FKITANFPAKNKAISLKIQLFPLAY 228 L++ I + + AN + ++ I Sbjct: 190 HLGSGSLALPGISVG-SFDARIALKGDTIEKMAGDMYVQANEVDVSNWLAQYINTEKQQL 248 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI--SDGNVRIS 286 I+L L N+ F++ + S G F + + R+ Sbjct: 249 HSNINLQAWLELNQGLVS-DVKVQWLPSFARWELAGEKQQLSLSEGGFHLFPEQKSWRLK 307 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342 L + S + + ++N + + + DL E F + Sbjct: 308 STGLAFNSNDKSW-PSLEFEALLGKQNKIWLQQVDIALLSDLAELTNFNNLTPFLQ 362 >gi|238758351|ref|ZP_04619529.1| hypothetical protein yaldo0001_2390 [Yersinia aldovae ATCC 35236] gi|238703474|gb|EEP96013.1| hypothetical protein yaldo0001_2390 [Yersinia aldovae ATCC 35236] Length = 1268 Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 36/318 (11%), Positives = 96/318 (30%), Gaps = 33/318 (10%) Query: 13 FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID 72 ++++ G + I D+R + + G + + P++ +DI++ Sbjct: 2 VALLVSGLRMMLPLI--NDYRPQIVAKIQSVSGIPLEIGFMQGAWESFGPTLELRDIQVK 59 Query: 73 QKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--QRKS 129 +++ +++ + LL ++ DM Q L+ + N Sbjct: 60 MPHTD---WQVQRVTLALDVWQSLLHWRWQLRDMTFYQLQLDLNTTLNMQQNNSRNLEAG 116 Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSIDSIKGS 188 + I L+ ++ RI + + + L S +S+ +I G Sbjct: 117 NLADIFLRRLDHFDLRNSRISFLTPSGPRAKLDIPQLTWLNSHNRHRAEGEISLSTINGQ 176 Query: 189 V-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID--LFGNLFWNEKQP 245 + + + + + ++ +Q + I L N + + Sbjct: 177 HGVVQVRMDLHDNQGILN----------NGTVYMQADNIDLKPWISRWLRANTGLDSAEF 226 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 + ++ N+ LS ++ + + + + L+ + D Sbjct: 227 SLAAWLTIKSGEIYHGNVLLSEGQANWT--VAGKAHQLAVDNFVLEGRRQGNGWQID--- 281 Query: 306 KVSQDEENLLNFSENGAE 323 LN +G Sbjct: 282 ------APELNLKTDGQA 293 >gi|303230245|ref|ZP_07317013.1| phage prohead protease, HK97 family [Veillonella atypica ACS-134-V-Col7a] gi|302515171|gb|EFL57145.1| phage prohead protease, HK97 family [Veillonella atypica ACS-134-V-Col7a] Length = 1429 Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 53/392 (13%), Positives = 125/392 (31%), Gaps = 34/392 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKI--AVKGGIKIHI 58 M R+ +G +V+ +G + I+ R + + ++ +HI Sbjct: 1 MTRKKWCLIGA--AVLGLGVVGIATSINPIAER-YVAPMVQEQLHNTVRGTIQYD-SMHI 56 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-------GEIRVFDMYIDQPH 111 V +++ + + D + + +++ ++ S G V + +++P Sbjct: 57 DWDGDVVLQNVSLRDENDHL-VAAVPTMNVSMKWTSAPSILMGNSSGAAIVSTITLEKPD 115 Query: 112 LNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG---GRIKIIDQESDQVYFLSDLNLQ 168 ++ + + G N + + V G ++ D V+ LS+L+ Sbjct: 116 VHVWQLADGSWNVNSLLESSSKNDKKSFDGNIVINDATGAVRFKD---GNVHRLSNLDGN 172 Query: 169 IS-ARFLNIISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLKIQLFPL 226 I+ L+ S+ G+ + + + A + +++ L Sbjct: 173 IALNVDGMTKGALNGLLDDHSIAVNGSIDMNKMDDFDLFVRAESVDISGIMNMVPSNKNL 232 Query: 227 AYPIII--DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + I D+ + + + SG + G N + + + +G + V Sbjct: 233 SITSGILHDVKAQITGRDGKYSMSGNLAFDGLGGTYKNGSTTYQIGQGNGKIFFQNNTVL 292 Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344 IS S + V+ +E LN + + F + + N Sbjct: 293 ISH----SGWYVNDQAVKVNGLVTLGDEVGLNLNAVADSVALE----AFTKNQITGNVGA 344 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376 + SVN D + +N+ D Sbjct: 345 RVHIGG--TSVNPYVSGSIKSDAISYDNYQID 374 >gi|294507265|ref|YP_003571323.1| conserved hypothetical protein containing DUF490 [Salinibacter ruber M8] gi|294343593|emb|CBH24371.1| conserved hypothetical protein containing DUF490 [Salinibacter ruber M8] Length = 1726 Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 30/268 (11%), Positives = 72/268 (26%), Gaps = 19/268 (7%) Query: 63 SVFFKDIRIDQKEDGS----FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 S+ D+ + + + ++ L++ LL G + + + ID P ++ Sbjct: 90 SLRLADVSLTRPAPDRAAPATMAHVDSLAVEYRPWALLRGRLHLTAVSIDGPSATLRQAA 149 Query: 119 KGVSNW-------FQRKSTMDMIHNVILEKIHVKGGRI--KIIDQESDQVYFLSDLNLQI 169 +W + ++++ V G + D + + ++ Sbjct: 150 DSTWDWARHLPASAPASEDTSAALPIRVDRLRVSAGAFAARFYAGGRDSTARVRGITVRA 209 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 + LS+ ++ G D + A+ ++L Sbjct: 210 RDLYYG----LSMGGRLDTLGLRGRLPTDTTELRLAARGAVSERRVALD-TLRLASPRSA 264 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS-DGNVRISRY 288 + L + SV D L +L A + + + S Sbjct: 265 VQGGGTARLPAAPGDSLDDVALSVRADPLVLGDLTAFAPFLDVDPREALDLRARLTGSED 324 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLN 316 +L + D + L Sbjct: 325 RLALTTDVTVRDGGGRFTAEATATPRLA 352 >gi|158520813|ref|YP_001528683.1| hypothetical protein Dole_0796 [Desulfococcus oleovorans Hxd3] gi|158509639|gb|ABW66606.1| hypothetical protein Dole_0796 [Desulfococcus oleovorans Hxd3] Length = 577 Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 27/223 (12%), Positives = 78/223 (34%), Gaps = 8/223 (3%) Query: 2 LRRVLIGLG-FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +++++ G F V++ G L + ER+ T +VG K+ + G + + ++P Sbjct: 1 MKKLIRWPGLIAFVVLVGGLAGFWLLFADAIVKGIIERRGTAMVGAKVEIAG-LDLTLVP 59 Query: 61 FPSVFFKDIRIDQKE-DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + + + + +I + M + LL ++ + +M I+ S Sbjct: 60 A-GMRISGLAVTDPDSPMTNAVEIGEMVMTVDSGRLLRRKLIIDEMGIEGMRFGTARSVS 118 Query: 120 G---VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 G + K+ L + + + ++ + + ++L I A Sbjct: 119 GAVKKRTADRPKNAEKAAKKFNLPSFDMPDPKEILEKEDLETIRLANELKADIDAARARW 178 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 + + + + E + ++ + + ++ Sbjct: 179 EARIQELPDRQAFE-EYKSRINKIKTGARGLSGLLGTAGEAAV 220 >gi|218666140|ref|YP_002427384.1| hypothetical protein AFE_3017 [Acidithiobacillus ferrooxidans ATCC 23270] gi|218518353|gb|ACK78939.1| hypothetical protein AFE_3017 [Acidithiobacillus ferrooxidans ATCC 23270] Length = 446 Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 32/289 (11%), Positives = 84/289 (29%), Gaps = 21/289 (7%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68 +F ++++ F R E + + + + H + Sbjct: 32 AAVFILLMLVVLGGVFFWFAGGPRYAVEEFLAGRLRQPVYLAANPGWHWGKQELRIVLPG 91 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128 +R+ + +++ + LL G +++ + +D P L N Sbjct: 92 LRLGPTD--LPLFSASRITVALPWRALLHGRVQLQRIELDTPVL----------NAPWTG 139 Query: 129 STMDMIHNVIL-EKIHVKGGRIKIIDQESDQVYFLSDLN---LQISARFLNIISPLSIDS 184 + + L ++ V+ G ++ + L+ ++ L L + Sbjct: 140 AANASGAALSLPGRVVVRDGTLRWS-GVAGHTLSLTAVHGQVLADGPSRLVGDWHWRDKT 198 Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 + A T + + + + I ++ W E++ Sbjct: 199 GRWHFAAGMTSAPTLQARRISLLVGTARDPALLQVGIPTLQSVSGELVLPTMRARWQEQK 258 Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLS--GNFKISDGNVRISRYKLQ 291 S V + L+ ++ L+ + + V ++ KLQ Sbjct: 259 QG-SARLDVQALHLNMAQGRLAMQQGALTVGNDLSLQIRAVALNWKKLQ 306 >gi|294505263|ref|YP_003569325.1| hypothetical protein YPZ3_3154 [Yersinia pestis Z176003] gi|262363326|gb|ACY60047.1| hypothetical protein YPD4_3143 [Yersinia pestis D106004] gi|294355722|gb|ADE66063.1| hypothetical protein YPZ3_3154 [Yersinia pestis Z176003] Length = 1300 Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 104/327 (31%), Gaps = 33/327 (10%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PS 63 G + V L+ + + ++R + + G + V G ++ F P+ Sbjct: 2 FATGATIIVVVALLVSALRMMLPLINEYRPQIVAKIQSVSGIPLDV-GFMQGTWETFGPT 60 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + +DIR + +++ +++ + LL + D+ Q L+ + + Sbjct: 61 LELRDIRAQMPKAD---LQVQRVTLALDVWQSLLHWRWQFRDLTFYQLQLDLHTTLDATQ 117 Query: 123 NWF--QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISP 179 N + I L++ ++ RI + + + L S+ Sbjct: 118 NNGSNLETGNVHNIFLRQLDRFDLRNSRISFLTPSGPRAELEIPQLTWLNSSTRHRAEGQ 177 Query: 180 LSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID--LFG 236 +S+ +I G + + + + + ++ +Q + I L Sbjct: 178 ISLSTINGQHGVVQVRMDLHDNQGILN----------NGTVYMQADNIDLKPWISRWLQN 227 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 N + + + S+ N+ LS ++ + + + + + L+ Sbjct: 228 NTGLDNAEFSLAAWLSIKSGEVYRGNVLLSQGQANWT--VGSNSHQLSVDNFVLEGRRQG 285 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAE 323 + D +LN +G Sbjct: 286 NGWQID---------APVLNLKTDGQA 303 >gi|84503043|ref|ZP_01001139.1| hypothetical protein OB2597_01182 [Oceanicola batsensis HTCC2597] gi|84388587|gb|EAQ01459.1| hypothetical protein OB2597_01182 [Oceanicola batsensis HTCC2597] Length = 1098 Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 36/319 (11%), Positives = 92/319 (28%), Gaps = 42/319 (13%) Query: 29 WTDFREDFERQATLIV-GKKIAVKGGIKIHI--LPFPSVFFKDIRIDQKEDGSFESKIEG 85 ++ E + + G + + + + PS+ D+RI G + Sbjct: 57 PDWLKQRIEARVAGALPGTSMEFA-DLTLTVTDSWQPSLRLTDVRIMPLAGGDPVL-LSD 114 Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR------------------ 127 ++ + LL G++R + + +N + G Sbjct: 115 VTGSFDAEALLDGQVRPRVVTVTGARINVHRDEDGEYGVALGMPGGVGANNVARDLAQTL 174 Query: 128 ---KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 D L +I G ++ D++S + + + L + + Sbjct: 175 RAVSDLFDYPVFASLRRIEGAGLTVQYEDRQSRRSWTVDGGRLALEREADALRLRGDFAL 234 Query: 185 IKG-----SVIAEGTGNFDNKRSAFKI----TANFPAKNKAISLKIQLFPLAYPIIIDLF 235 + G ++ T + +A + A +++ L + L L PI L Sbjct: 235 LGGHSYATTIELSATAAMHSSAAALTLLFEDAAARDIASQSAGL-VWLGVLDAPISGALR 293 Query: 236 GNLFWNEKQPIYSGVFSVAG--DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 + + +G + + +R ++ + S ++S Sbjct: 294 VSTNEDGALGPLNGTLRIGSGAVAPNASAEPIPFDAARTYFRYEPEARTLTFSEISVES- 352 Query: 294 LPNSSTDEDNKTKVSQDEE 312 + + + +V + Sbjct: 353 ---AWVEATAEGRVVLGDI 368 >gi|313894691|ref|ZP_07828254.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str. F0412] gi|313440881|gb|EFR59310.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str. F0412] Length = 1397 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 102/327 (31%), Gaps = 27/327 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 ++ + + + +GA P I T + Q + + + + Sbjct: 4 KKWCLIGAAILGLSGIGASINP--IAQTYVAPMVKEQVNNAINGSVNYD---SLRVNWNG 58 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-------GEIRVFDMYIDQPHLNFY 115 V D+ I ++D +++ + L S G + + ++ P L+ + Sbjct: 59 DVVLTDVTIKDRDDHL-VGTAREVAVGVKLSALPSIITSNTSGATAISSVIVEAPDLHIW 117 Query: 116 LSSKGVSNWFQRKSTMDMIHNVILEK-IHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + G + + D + + I + GR+ + + + L+ ++ Sbjct: 118 QLADGSWSVEKLVKPSDPNKSGSFDGSITIHDGRVAVRT-KDGLKRNVESLDGTMALNMG 176 Query: 175 NII-SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA-----ISLKIQLFPLAY 228 + + D SV+ GT + D+ F + + A + L+ L Sbjct: 177 GMSKGAFTADVDGSSVVLNGTIDMDHVS-NFDLFVQADEIDTAGFMSFVPLRQDLSVTGG 235 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 + DL N+ + I SG G + +G ++ + ISR Sbjct: 236 KLQ-DLHLNVKSEDGNYIMSGNVGFKGLTGTYKRGNTIYNITDGTGRIMLNHDQIVISRS 294 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLL 315 + + V+ +E Sbjct: 295 SWRV----NDQVAKVNGLVTLGKEEEY 317 >gi|209694083|ref|YP_002262011.1| hypothetical protein VSAL_I0488 [Aliivibrio salmonicida LFI1238] gi|208008034|emb|CAQ78173.1| putative exported protein [Aliivibrio salmonicida LFI1238] Length = 1287 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 33/284 (11%), Positives = 85/284 (29%), Gaps = 24/284 (8%) Query: 21 FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSF 79 +P ++ + E+ + G I++ G +K PS+ + G Sbjct: 32 LLLPTL---NKYQPEIEQLLSQSTGFSISI-GEVKGRWRNTNPSLNLTKLTATDPNTGDE 87 Query: 80 ESKIEGLSMRAE-FLPLLSGEIRVFDMYIDQPHLNFY-----------LSSKGVSNWFQR 127 + + ++ L + + + D+ ID+ + L + Sbjct: 88 IISVGSVEIQLNILSSLWAQQPQFADLRIDKLTADLTSLGNDKSEENKLEVDDKNTEDSL 147 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187 ++ + V L +K + ++ L D +LQ ++ + + Sbjct: 148 SKRLEDLFLVRLNHFSIKNSHVTFTALNGNEKTILID-SLQWRNESRKHLAEGVVSVLGS 206 Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 + N + FK F + + ++ Q + I ++ E + Sbjct: 207 EI------NQLKVIANFKEKGTFKSLDGDFYVEAQNIQITPWIKDNIQQEYGVTEGEVSV 260 Query: 248 SGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 + S +E + + I ++ ++LQ Sbjct: 261 NAWLSFKNGQPIDALVEAAPSYINWEEDKTIHKLSIESGVFELQ 304 >gi|254448636|ref|ZP_05062095.1| conserved hypothetical protein [gamma proteobacterium HTCC5015] gi|198261825|gb|EDY86111.1| conserved hypothetical protein [gamma proteobacterium HTCC5015] Length = 1283 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 31/287 (10%), Positives = 88/287 (30%), Gaps = 25/287 (8%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFR-EDFERQATLIVGKKIAV-KGGIKIHILPFPSVFFK 67 L ++L + + + + R ER+ + ++G + + P V F Sbjct: 5 AVLLLLILTSQIGLRILLPMAEDRLPRIERELSTLLGGDVTIVSMDSHWDWF-VPYVDFV 63 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125 + + +E + + LS+ + + G + + L + Sbjct: 64 GVEVVDRETPEWRQSLGRLSVGVNLIEMWRAGHWMPNSLSLSDARLQVLYHPEKGYRLPG 123 Query: 126 ---QRKSTMDMIHNVILEK---IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 + + L + +H++ + I + + + + ++ +S+ Sbjct: 124 IYIESQDGNTAPPWQSLSQHKFLHIENASLAIRNVVNQRELRVDAIDFDLSSGDSRYRGQ 183 Query: 180 LSID-----SIKGSVIAEGTGNF-DNKRSAFKITANFPAKNKA-----ISLKIQLFPLAY 228 L+ SV + +G + D + + PA + ++ + Sbjct: 184 LNWRPPAQIGPPASVQYDVSGQWLDPRSWEGGVAVQVPAVDLDALKHFFPPAQRIETGDF 243 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 + D+ + ++ SG + + N++ A G Sbjct: 244 SLRADIDFD---RQQGATGSGQIHLGVQLLEGGNIQWDAPLLLTRGE 287 >gi|110680197|ref|YP_683204.1| hypothetical protein RD1_2999 [Roseobacter denitrificans OCh 114] gi|109456313|gb|ABG32518.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 1119 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 38/292 (13%), Positives = 89/292 (30%), Gaps = 51/292 (17%) Query: 6 LIGLGFLFSVVLVGAFTVPL------FIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59 LI G +F+++LVGA L + R+ E Q V + I Sbjct: 21 LIWTGVIFALLLVGASVSALWLQGRELLAPPWLRDRIEAQLGQAV-------PDVDISFG 73 Query: 60 ---------PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110 P +D+ + + +S L+ + + ++++ Sbjct: 74 EVVVVIDDDWRPRFSVRDVHLADAQGAE-IVSFSDVSGALSLSALMERRLSLGTLFVNGV 132 Query: 111 HLNFYLSSKG------VSNWFQRKSTMDMIHNV--------------ILEKIHVKGGRIK 150 + + S G +N + + L ++ ++ Sbjct: 133 FVTLHRSPDGPLSLSTTANAEVVSMQAPTLVELVSELDKLLLRPVLRDLSLFEMRAITLR 192 Query: 151 IIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG-----SVIAEGTGNFDNKRSAFK 205 D +D+ + + +++ + + + + G ++ A+ TG +++F Sbjct: 193 YEDARADRAWTVDGGTMRLRRAGDALGINVDLAVLGGGADVATLSADYTGTIGAAQASFG 252 Query: 206 ITA-NFPAKNKAISLKI--QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254 + N A + A L L PI L G+ + + + Sbjct: 253 LALENIDAGDVASQGAAVSWLSVLQAPISATLRGSTQEDGALAPLNVALQIG 304 >gi|121534952|ref|ZP_01666771.1| protein of unknown function DUF490 [Thermosinus carboxydivorans Nor1] gi|121306551|gb|EAX47474.1| protein of unknown function DUF490 [Thermosinus carboxydivorans Nor1] Length = 1444 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 40/381 (10%), Positives = 106/381 (27%), Gaps = 38/381 (9%) Query: 31 DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 ++ + G ++ ++ + + + F D+ + + E +++ Sbjct: 34 RMQDKVAEELGRAAGGRVTFA---RVEVTGYNKLSFYDVAVYDARGER-LAASERVTVTI 89 Query: 91 EFLPLLSGEI---RVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGG 147 +LSG V + +++P L G N Q + +I ++ G Sbjct: 90 SLTSMLSGHFGPEAVTSVTLERPLLELIQHHDGRWNVEQFLDRPGRDGSACRARITLEDG 149 Query: 148 RIKIIDQESDQVY-----FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202 + + + + ++ L+ + + +G++ +G G + Sbjct: 150 TVSMRSPQGAWQAEKVSGTIDFVHNPTIFIKLDSTVDGAKVTAEGTLNTDGQGVVRLTAA 209 Query: 203 AFKIT--------------ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248 +T A++ ++++ L Y + G + PI Sbjct: 210 EAPLTRLAALAPAGSMVKLTAGTAQDIMLTVRRDGQGLTYAGEARIAGAALDIDGIPIRD 269 Query: 249 GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI--SRYKLQSILPNSSTDEDNKTK 306 G + L L K+ + G G + + S L + +++ D Sbjct: 270 GSALL---TITPQYLYLYKGKATIHGQTVTVHGRIALATSEPVLDLAVASAAFDPAALGY 326 Query: 307 VSQDEENLLNFSENGAESMHDLNETDFFEEE-------EKKNKNDDLKKDDIQYSVNKKE 359 + G + + + LK + + Sbjct: 327 EPLQGPLAFKLTVAGTAANPVVTGQAALRDGRIAGYPVTNLQTKIVLKNKVLTVTDGTVN 386 Query: 360 EKDNSHDKENQENFSGDKMIL 380 + + +G L Sbjct: 387 AFGGRVAVKGTLDLTGQNYEL 407 >gi|212634629|ref|YP_002311154.1| pili biogenesis ATPase [Shewanella piezotolerans WP3] gi|212556113|gb|ACJ28567.1| ATPases involved in pili biogenesis, putative [Shewanella piezotolerans WP3] Length = 1068 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 46/389 (11%), Positives = 115/389 (29%), Gaps = 38/389 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKE---DG 77 + L I + + +Q + ++ + + + I I PF + +I + + + Sbjct: 72 ILGLLIPYIAVK-QVPQQLSNLLQRPVILN---DIRINPFTFEMTIDQFQIQESKTTLNS 127 Query: 78 SFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSS-----------------K 119 + E L+ F + + + D+ + P LN K Sbjct: 128 DEFVEFEQLTFEYRFWHSIFNTAFSIADVTLLNPSLNVERLKTDNSLTFNFSDILDTLAK 187 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 S + + ++E + + + ID ++ +NL I + Sbjct: 188 NSSQPEGTSEPATGLPHFMVENLAIVDANLSFIDNITEGKLRYPQVNLNIKSFDSKNALS 247 Query: 180 LSIDSIK----GSVIAEGTGNFDNK-RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 +S+ S + GN + + + + I L + + ID Sbjct: 248 MSMQSKQEEQSNQYAIHFVGNNGGEISTQGVVQLEPLSIVGDIQLT-DIQLPQFWSFIDK 306 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV---RISRYKLQ 291 + + + + + + + + + D + + + ++ Sbjct: 307 QFIANLASGRLSVDSQYRLEE-KNDYFQVTTNEGLIKFE-DLTLIDDKITVASLPIFAIE 364 Query: 292 SILPN-SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350 I + + SQ ++ G+ E K+ ++D + D Sbjct: 365 GIEFDLNHQSISADKISSQGLVVNTTLNQKGSNLEKLFEPKLATTAEPKQQQDDVVDNAD 424 Query: 351 IQYSVNKKEEKDNSHDKENQENFSGDKMI 379 + N D EN + +K+I Sbjct: 425 KEAQSLPWTAVLNGVDIENYQVNLTEKII 453 >gi|317485208|ref|ZP_07944089.1| hypothetical protein HMPREF0179_01442 [Bilophila wadsworthia 3_1_6] gi|316923499|gb|EFV44704.1| hypothetical protein HMPREF0179_01442 [Bilophila wadsworthia 3_1_6] Length = 1060 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 39/339 (11%), Positives = 96/339 (28%), Gaps = 23/339 (6%) Query: 2 LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKK---IAVKGG- 53 ++R +L L LF +++ + F R + + Sbjct: 1 MKRSTSILLYVLLPLFWALVLALGFFIYTFNQDPV--GFARSLSARFSAPEAGFVLSADQ 58 Query: 54 IKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113 + + P P+ + I ++ ++ +F LL GE R+ + + +P L Sbjct: 59 ASLSLFPRPAASVSGLTIRTPA---MTLFVDEGAVYPDFWALLHGETRIAGVRLLKPTLL 115 Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-----VYFLSDLNLQ 168 G + ++ + + + +K G I + +++ + +S ++ Sbjct: 116 LE-PPAGTTPDATQQPRFSIPPQLAEMDVELKDGTIASLLPGANKSGIHSQWRMSGISGS 174 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 + LS+ K D + + +N + + FP Sbjct: 175 ATVPGNGEPGELSLSVGKMEWYGNTPPEKDGQAPPIQTLSNVDLEISDLEY---AFPADA 231 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 ++ S F + + L G F + +V + Sbjct: 232 AAMLRFKATCAMPLSFGEGSPRFVLGVTARTTQGTLAIDGVASLDGTFSLKRQSVPVHVL 291 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + + Q + G ++ D Sbjct: 292 LPFTTEAPLGSLFQG-APLPQIAIKGASLKVEGDQATLD 329 >gi|332142212|ref|YP_004427950.1| hypothetical protein MADE_1014090 [Alteromonas macleodii str. 'Deep ecotype'] gi|327552234|gb|AEA98952.1| hypothetical protein MADE_1014090 [Alteromonas macleodii str. 'Deep ecotype'] Length = 1156 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 48/368 (13%), Positives = 103/368 (27%), Gaps = 55/368 (14%) Query: 13 FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71 +V + + + + G+K +V I I PF V ++ I Sbjct: 21 LVLVYFTYALLLGVLAPAILKTKLPQIVEEQTGRKASVA---DIAINPFLLKVDVRNFTI 77 Query: 72 ------------------DQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHL 112 + S + +S+ F + + V + ID P + Sbjct: 78 YASAHSGVLSESQIEKETTNTQPDSRFFSVGHMSLDVGFWHSVFTLTPAVEKLSIDAPFV 137 Query: 113 NFYLSSKGV--------------------SNWFQRKSTMDMIHNVILEKIHVKGGRIKII 152 + ++ +S I ++ L + + G + I Sbjct: 138 TVARLNNTNTTQTFNFSDILEHVAQQTPETDGAPSESENGQIPHITLGEFSLTHGHVIIE 197 Query: 153 DQESDQVYFLSDL-----NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207 D+ +D + +L +L A + S+ S + T F+ + Sbjct: 198 DRVTDTLLNYPELEVALQDLDTHAVLKDTAQSTSLQSANDAASKGSTSAFNQYQFTL--- 254 Query: 208 ANFPAKNKAISLKIQLFPLAYPIIIDLF--GNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 +I + QL PL +D+ + G S L+ E+ Sbjct: 255 VTAEKGKISIDGEFQLSPLKLTTSVDIDDIALVPLWSLGKHLIAANLADGTVSVSLHAEI 314 Query: 266 SAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 +K F + G I+ + ++S + + + +N + Sbjct: 315 FEEKDAF--QFLLQHGEFEINNLLFKRSPISNSKGGKDILSIPSFAVHNINVDALQQQVN 372 Query: 326 HDLNETDF 333 + D Sbjct: 373 IERVSLDA 380 >gi|94266835|ref|ZP_01290496.1| Protein of unknown function DUF748 [delta proteobacterium MLMS-1] gi|93452486|gb|EAT03082.1| Protein of unknown function DUF748 [delta proteobacterium MLMS-1] Length = 987 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 32/292 (10%), Positives = 83/292 (28%), Gaps = 37/292 (12%) Query: 36 FERQATLIVGKKIAVKGGIK-IHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93 ERQ + ++ + I I I P+ + + + + +E + +E L + E Sbjct: 38 VERQLVSLSAERAELTTSIDNIAINPYTLTFTMEGLNVTDRE-AAPLLALERLFINLELA 96 Query: 94 PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------------FQRKSTMDMIHNV 137 ++ + ++ + G +N + + Sbjct: 97 SVVRRAWSFNEFHVMGLEVALERFHDGTTNLGVVAERWLATAEPKEQAPQPQEKSDPVRL 156 Query: 138 ILEKIHVKGGRIKIIDQESDQVY--FLSDLNLQISARFLNIISPLSID-----SIKGSVI 190 ++ + V + ++D + + + LNL + + + D Sbjct: 157 VIADLLVDSAALSLVDNVPAERFATRVEALNLSVQNLSTLLDDTAAHDLTLTLGNDAVFT 216 Query: 191 AEGTGNFDNKRSAFKITANFPAK-------NKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243 +GT + + RS ++T + + L + Sbjct: 217 WDGTSSLNPLRSQGRVTLQGAYPRLVLEYFQDRLPFDLNGGRLETELDYRAGAAADGALS 276 Query: 244 QPIYSGVFSVAGDFSKLLNL---ELSAKKSRL-SGNFKISDGNVRISRYKLQ 291 I ++ G + S + L +G + V + +L+ Sbjct: 277 AAITDLQLTIMGTVLTASDSGERLASLPEISLENGELRWPAKTVSLDALRLR 328 >gi|261879206|ref|ZP_06005633.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270334153|gb|EFA44939.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 1541 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 49/398 (12%), Positives = 112/398 (28%), Gaps = 46/398 (11%) Query: 2 LRRVLIGLGF------LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55 +++ + +G L +VL F P F W + A+ +G +I+V Sbjct: 1 MKKYVKWVGIGILIPVLLMIVLCLLFYFPPFQKW--AVKQVTAYASQEMGLQISVG---H 55 Query: 56 IHILPFPSVFFKDIRIDQKEDG-----SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110 + + + +D+++ Q D + I + + PL ++ + + D Sbjct: 56 VSLAFPLDLALEDVKVLQPNDSLEHVTDTVADIGRVVADVQLRPLFDKQVMIDKLAFDHM 115 Query: 111 HLNFYLSSKGVSNWFQRKSTMDMIHNVILE--KIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 +N SN+ + ++ L+ I + R+ I + D+ L Sbjct: 116 KVN-------TSNFIPTARIRGTVGHLDLKAHGIDLNDERVNINHASL--RDAVLDIALT 166 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGT---GNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 + + S + E T + + K + Sbjct: 167 DTVIPDTMPSENFWKIKLAQLKVEDTDFILHMPGDTLSVKAYLGRTLARNTY-----MDL 221 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG-NFKISDGNVR 284 + G+L WN + Y + + +L L A K + + S +++ Sbjct: 222 YQGLYSV---GHLDWNNGRLQYDKNYEPKVEGLDYSHLSLDAIKLKADSFRYCNSKLDMK 278 Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQD--EENLLNFSEN-----GAESMHDLNETDFFEEE 337 I + + + K + LN DL D + Sbjct: 279 ILAATFREKSGLAVENLQGKLAMDSTRFALPDLNLKTEAGTELSLAYDMDLQAFDDTQPG 338 Query: 338 EKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSG 375 + + ++ + + Sbjct: 339 KLGMQLKGQIGKQDLITIAGNSLPRELARRWPAKPLIA 376 >gi|116748275|ref|YP_844962.1| hypothetical protein Sfum_0830 [Syntrophobacter fumaroxidans MPOB] gi|116697339|gb|ABK16527.1| protein of unknown function DUF490 [Syntrophobacter fumaroxidans MPOB] Length = 1256 Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 85/286 (29%), Gaps = 29/286 (10%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93 + + G + + PF + D+ + + + + Sbjct: 50 DRLVSEVEGETGYSVRIG---SYRWWPFSKLELVDLTVKAAD--RNLLECRHAEISYGI- 103 Query: 94 PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---------RKSTMDMIHNVILEKIHV 144 L +R ++ +++P L+ KG + V+L K+ V Sbjct: 104 ALEWPPVRPREIVLEKPALHLESRGKGEFRIPALNGGRAADGSPEKGLGLLPVVLPKVRV 163 Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204 GG + Q+ QV + ++ + R + + I G + Sbjct: 164 IGGAVD-ASQDGRQVLAIREVTGTLLLREIRDPDGVRIKVDFGQWQGRADLPAWG---DW 219 Query: 205 KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS-VAGDFSKLLNL 263 ++T N + A+ F L ++ G+ E +P Y G + + F + Sbjct: 220 ELTGNAEISDGAVHSGGIRFSLREKGSVECRGD---WELRPPYQGAATVLLNGFPVDSFV 276 Query: 264 ELSAKKSRL---SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 RL SG + + L + + D K + Sbjct: 277 SGHGGLPRLKEVSGRLVLDHKT---EAFVLDHEINTNLGDFAGKLE 319 >gi|197119545|ref|YP_002139972.1| hypothetical protein Gbem_3175 [Geobacter bemidjiensis Bem] gi|197088905|gb|ACH40176.1| protein of unknown function, DUF490-containing protein [Geobacter bemidjiensis Bem] Length = 1485 Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 107/361 (29%), Gaps = 37/361 (10%) Query: 2 LRRVLIGLGF-LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIA---VKGGIKIH 57 ++R+ + LG + ++ LV + +D + G ++ V+G ++ Sbjct: 1 MKRIALYLGGAILALALVVFAGLVWLVDTSSGARFALTTLDSFAGVEVTVQKVEGRLRDR 60 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 +L + + + + ++E L + + LL G++ V ++ + + Sbjct: 61 LL------LQGVTVSRP---RMLVRVEKLRLVWDPERLLGGKLLVHELALRGVRI----- 106 Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 T L V G I + + Sbjct: 107 ---------EDDTPLSEKAPELRWPRVSGAARSIDAEVTRFSLKELSYRHLQQPPSELKE 157 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 S+ +G++ G G+ R ++SL ++L P A +D Sbjct: 158 LAASLALKEGTLTLTG-GSISASRGTASGELAAGLWRPSLSLDLRLSPSAAVADMD---- 212 Query: 238 LFWNEKQPIYSGVFSVAGDF-SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 ++ + + G L A + L+ I+ + KL Sbjct: 213 -AFSVQARLMPGTLPEQMAGPLVLSGRRGGAPRLELTSELGITSTGFNLRNLKLVRPGRR 271 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMH--DLNETDFFEEEEKKNKNDDLKKDDIQYS 354 + +++ E +LN + AE +LN D + + + Sbjct: 272 GTLSGSGSMTLTKTE-PVLNLALRAAELDLSKELNTPDLISGTLNFSGTPSNYLGNFSLA 330 Query: 355 V 355 Sbjct: 331 N 331 >gi|67921753|ref|ZP_00515270.1| Protein of unknown function DUF490 [Crocosphaera watsonii WH 8501] gi|67856345|gb|EAM51587.1| Protein of unknown function DUF490 [Crocosphaera watsonii WH 8501] Length = 1815 Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 31/320 (9%), Positives = 83/320 (25%), Gaps = 18/320 (5%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93 E+Q + + + + + + F + F + + + L + L Sbjct: 85 PMVEQQLSRFLNRPVELG---TLETFSFNYIRFGSTDLLSTPTDPAKVSMSALKISYNPL 141 Query: 94 PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR-IKII 152 + ++ +P + + ++ V + + ++ G+ I + Sbjct: 142 SYIINGKLEIEVTAIEPSAYLEQGKN-RDWLVTKFNKLNPNSPVRFKHLTIEKGQAIVVS 200 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212 + +L + + ++ G N + N Sbjct: 201 RSAEGEKEDPINLQNLSGIIQVIHERREIKFQVNSQIVDSGKLNVSGVYDRNEKATNLLV 260 Query: 213 KNKAISLKIQLFPLAYPIII---DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK 269 + I+ L PI + + NL + + VA ++ + Sbjct: 261 RGNQINANRVSQILPIPIELKSGKVDANLEVSYGNKKIKNLQGVARLNQVSTRIKGLPQS 320 Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 GN ++ + + LN + N + Sbjct: 321 LVAEGNLMFKGRRIKFDEVTTNFGEVTG--IVKGNIDLDEG----LNLTANTQVTSIK-- 372 Query: 330 ETDFFEEEEKKNKNDDLKKD 349 D F+ ++ KN + Sbjct: 373 --DVFKTIKQDPKNMSVSGK 390 >gi|121998915|ref|YP_001003702.1| hypothetical protein Hhal_2136 [Halorhodospira halophila SL1] gi|121590320|gb|ABM62900.1| conserved hypothetical protein [Halorhodospira halophila SL1] Length = 1141 Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 38/276 (13%), Positives = 75/276 (27%), Gaps = 26/276 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFI-DWTDFREDFERQATLIVGKKIAVK-GGIKIHILPF 61 RVL GL + V L GA + L + ER A+ + + V+ + + Sbjct: 11 RVLRGLRPVLLVALAGAVALRLLVWLAPPLTSPVERLASQALEAPVTVERAELAWR-GVW 69 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKG 120 P + +R+ +E ++ L L G R G Sbjct: 70 PGIELHGVRV----GDEASITLERATLTPAPLESLRAGAPRWAAASAAGVRATLVADRHG 125 Query: 121 VSNWFQRKSTMDMIHNVILE----KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 S + L+ ++ V +++I + L I+ R Sbjct: 126 WSLPGLTPGGEGGEPRLDLDQMPRRLAVADAALELIPRRGA---ALESARFDIAGRRSAE 182 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 L + S++GS + + ++ L +A Sbjct: 183 ALQLGLRSVEGSAGL-------GRGVQLAARLPR-GDPGSATVYAALDEVAVAPW---AA 231 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 L G + + + + + L Sbjct: 232 ALAETWAAGTLDGQLWLEWADGRADAAHGALRANAL 267 >gi|163794304|ref|ZP_02188276.1| hypothetical protein BAL199_21594 [alpha proteobacterium BAL199] gi|159180472|gb|EDP64993.1| hypothetical protein BAL199_21594 [alpha proteobacterium BAL199] Length = 1072 Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 32/310 (10%), Positives = 84/310 (27%), Gaps = 47/310 (15%) Query: 30 TDFREDFERQATL-IVGKKIAVKGGIKIHILPF---PSVFFKDIRIDQKEDGSFESKIEG 85 + E + G + V G ++ + V D+ + + + ++++ Sbjct: 59 DVLKPYVETMLSPPNAGFRTEV-GVTQVSWNGWNRALDVVAADVSMIEPDGSI-RARVDS 116 Query: 86 LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI------- 138 +++ LL+G + + + P + ++ G ++ Sbjct: 117 IAVALSPKALLAGRLAPKRINVIDPKVTVVRTADGGWRLMPESDGPATEFDLSGLLQAFS 176 Query: 139 ----------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI-----D 183 L +I + G RI+++D + + + + Sbjct: 177 GTTPDSPLSELLEIDISGARIRLVDDQRGVSVTAQGVVAALVRTRDGLAFHGEATVAWDA 236 Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF---PLAYPIIIDLFGNLFW 240 + V G + R + N + +SL L ++ P+ + Sbjct: 237 GARTPVEWHGGYRNSSGRVDVEARLNGLPVDALVSLHPALERLRGISVPVSGAVRIATGI 296 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLEL----------------SAKKSRLSGNFKISDGNVR 284 S + L ++ +L G + V Sbjct: 297 TGVGLSGSAELEFGPGRVSIPGLIDRPVDLAGGTATITAGADLEQVKLDGTLDLGGPKVA 356 Query: 285 ISRYKLQSIL 294 +S L++ Sbjct: 357 LSATALRAGS 366 >gi|298372777|ref|ZP_06982767.1| hypothetical protein HMPREF0156_00824 [Bacteroidetes oral taxon 274 str. F0058] gi|298275681|gb|EFI17232.1| hypothetical protein HMPREF0156_00824 [Bacteroidetes oral taxon 274 str. F0058] Length = 1517 Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 39/355 (10%), Positives = 95/355 (26%), Gaps = 39/355 (10%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89 + + + G K++++ K+ + F S+ + + + + ++ Sbjct: 34 DAIIQKLTAELSKKTGTKVSIE---KVSLKLFNSLSINGLYV-EDNNRDTLVYAGEVAAV 89 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF---------QRKSTMDMIHNVILE 140 + LLS +I + ID+ LN + GVSN + + + Sbjct: 90 FSPIKLLSKKILFKKVDIDKLELNIAVDKNGVSNLDIFKKLFSSQDDNKDKEWLFVFQIN 149 Query: 141 KIHVKGGRIKIIDQE-----------SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189 I ++ D + + +S++N Q ++ K S Sbjct: 150 DIKLRNSHFSFRDLRRQTEEADNHFFASENIRISNINGQFVVYKIDKNY-YKGKIKKFSF 208 Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY-- 247 + + ++AF IT + + I + N+ +P Sbjct: 209 EEQSGFRLKDLQTAFLITDSTCLVKDTKIFLPNSKISSDSIYFNFS---KLNKPKPNIGE 265 Query: 248 ------SGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 V L+ +S +S I L+ + + Sbjct: 266 SRIAIKDLEAKVDLKDLWQLSPYISGLNGIMSAQLSAEG---YIDDINLRYLNITYGSQI 322 Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356 ++ + A ++ ++ +N Sbjct: 323 GFIGNARLAGLPQIDKTYISANIINLYGSIPAIQDLIANTTKKPAVLPQELIRLN 377 >gi|238782974|ref|ZP_04627002.1| hypothetical protein yberc0001_1270 [Yersinia bercovieri ATCC 43970] gi|238716177|gb|EEQ08161.1| hypothetical protein yberc0001_1270 [Yersinia bercovieri ATCC 43970] Length = 1273 Score = 57.6 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 106/335 (31%), Gaps = 29/335 (8%) Query: 13 FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71 ++++ G + I D+R + I G + V G ++ F P++ +DI Sbjct: 2 VALLVSGLRMMLPLI--NDYRPQIVAKVQSISGIPLEV-GFMQGTWETFGPTLELRDISA 58 Query: 72 DQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--QRK 128 + +++ +++ + LL + DM Q L+ + N Sbjct: 59 KLPQAN---WQVQRVTLALDIWQSLLHWRWQFRDMTFYQLQLDLNTTLDAQQNSSRNLET 115 Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSIDS 184 + I L+ ++ R+ + + L+ LN + R IS +I+ Sbjct: 116 GNITDIFLRQLDHFDLRNSRVSFLTPSGPRAELEIPQLTWLNSRNRHRAEGQISLSTING 175 Query: 185 IKGSVIAEGTGNFDN---KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 G V+ + + + A+ IS + L L Sbjct: 176 QHGVVMVRMDLHDNQGILNNGTVYLQADNIDLKPWISRWLHNNTGLDSAEFSLAAWLSIK 235 Query: 242 EKQPIYSGVFSVAGDFSK----LLNLELSAKKSRLSGNFKISDGNVRISRYKLQ------ 291 + IYSG ++ + + +L+ L G + + + + L+ Sbjct: 236 SGE-IYSGNVLLSQGQANWMVGDQSHQLAVDNLVLEGRRQGNGWQIDAPQLSLKTDGQSW 294 Query: 292 -SILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 ++ +N + D+ L + Sbjct: 295 PKGQLSALWLPENTQFIGPDQSQELRIRATNIQLE 329 >gi|313206522|ref|YP_004045699.1| asma family protein [Riemerella anatipestifer DSM 15868] gi|312445838|gb|ADQ82193.1| AsmA family protein [Riemerella anatipestifer DSM 15868] gi|315023537|gb|EFT36541.1| hypothetical protein RAYM_07114 [Riemerella anatipestifer RA-YM] gi|325336030|gb|ADZ12304.1| Protein of unknown function DUF490 [Riemerella anatipestifer RA-GD] Length = 1658 Score = 57.6 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 43/359 (11%), Positives = 114/359 (31%), Gaps = 23/359 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR I LG + ++ + F++ + + ++ + I++K ++ I F Sbjct: 9 LRIGAIILGSVVIILSILVFSLNIPVVQNFVKDRVVSYVETKIKTPISLK---RVCI-SF 64 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+ + ++++ I L + + LL + + +D N +G Sbjct: 65 PNRLGLEELYLEEKNKDTLLHINKLDVGLDIFQLLQNKADFTSIELDGLRANVKRDEQGR 124 Query: 122 SNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 N+ + + L KI ++ + D + + N + Sbjct: 125 FNFDYILDAFASNKDEEKQDSKPFILSLNKIKLQRVNVNFNDFQEGNHLKIEFNNFETKV 184 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA-NFPAKNKAISLKIQLFPLAYPI 230 + N+ + + + + + + A K TA + + ++I+L L + Sbjct: 185 KDFNLEKNIYALNGLTADGLKLRLKQEILKEAIKETAKTIDSLSAKKPMQIKLDFLRFT- 243 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 + + N Q + +F ++L + K+ + + Sbjct: 244 --NFDVDYADNTTQSYFKVLFKELSGDFNNIDLPENKYDID---QIKLLGAKINVDLKSS 298 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENG-AESMHDLNETDFFEEEEKKNKNDDLKK 348 +N KV + + + + + N+ ++ + + KK Sbjct: 299 SQNKSLQDELPENPAKVKS-KTPNVKLNLLALDDVILSYNDNAQKHQQGFDANHLNFKK 356 >gi|159043728|ref|YP_001532522.1| hypothetical protein Dshi_1179 [Dinoroseobacter shibae DFL 12] gi|157911488|gb|ABV92921.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12] Length = 1105 Score = 57.6 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 40/352 (11%), Positives = 92/352 (26%), Gaps = 48/352 (13%) Query: 15 VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI---HILPF----PSVFFK 67 L G+ VP E ++A ++ + + +G + + P V Sbjct: 44 FALRGSVAVP---------EPLVQRAQAVLSRALDGRGDADLGGIELYLTEEGRPRVSLT 94 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127 + + D + L + LL GE+R + ++ L + G+ + + Sbjct: 95 GLTLR-AADSVDSVTLPRLDVVLARRALLRGEVRPESVRLEGARLRLSRDADGLLSLAFQ 153 Query: 128 KSTMDM------------------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 L ++ + + + D QV LS + Sbjct: 154 SGGALTRVPSLPALIAEIEAVFDIPALQDLRRVTLSDLTLDLADSRLRQVVTLSGGEAVL 213 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI-----SLKIQLF 224 + L++D A +++ A + + L Sbjct: 214 DVSETALSLALALDLPGIGTGASLRFTTRKGDPETRVSLRMDAVPAQVLARQSPVLAPLG 273 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGN 282 A P+ G L + + G ++ L+ ++ + + Sbjct: 274 VFAGPVSARFAGGLRPDGRLSALEGQLALGVGALALGGKAAPLAVSEATATWRYAPDQRR 333 Query: 283 VRISRYKLQSILPNSSTDEDNKTK------VSQDEENLLNFSENGAESMHDL 328 + I L + + + L + +E D Sbjct: 334 MFIEDIVLDTDRLRLTGSAHGDIADGAASGSAPGGFPDLLLHADLSEIWVDP 385 >gi|172036283|ref|YP_001802784.1| hypothetical protein cce_1368 [Cyanothece sp. ATCC 51142] gi|171697737|gb|ACB50718.1| hypothetical protein cce_1368 [Cyanothece sp. ATCC 51142] Length = 1983 Score = 57.6 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 40/326 (12%), Positives = 103/326 (31%), Gaps = 17/326 (5%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66 I + ++ + F E+Q + ++ + + + ++ F S+ Sbjct: 28 IIIATTSVTLVFIGYAGLSFFLREYLPPWLEKQLSKVIYRPVEIG---ELEGFSFTSLQL 84 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126 +D I + + S + E + + L +L +++ + + G W Sbjct: 85 EDAYIPETSEYSSQLTAETIKVTFNPLTILLQRKLAVNVFPQKVTVKIREKKPGQ--WLN 142 Query: 127 RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS---DLNLQISARFLNIISPLSID 183 K+T ++I ++VK I ++ +S++ + ++ + S + + Sbjct: 143 VKATDEVIPLNFDLSVNVKNTEIILLPYQSEKTVNIKVAGNVEYEKSKQRKWLYDINLGL 202 Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL--KIQLFPLAYPIIIDLFGNLFWN 241 + +G + +S + N +S+ + + +L NL Sbjct: 203 VESNEIELQGETFVKSTKSKISLQLNQLPLQAWLSIFPNLPFNLDESYLKANLNLNLPSL 262 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 G +V + + L K + + D + I++ + IL + T Sbjct: 263 RDLRETKGQGNVQLEDFQAKANSLK-KPIQADLAVQFEDNKIFINQ--GKIILGDILTTL 319 Query: 302 DNKTKVSQDEENLLNFSENGAESMHD 327 + N D Sbjct: 320 QGYYDWQKGS----NIKIEVQNVNID 341 >gi|158333304|ref|YP_001514476.1| hypothetical protein AM1_0074 [Acaryochloris marina MBIC11017] gi|158303545|gb|ABW25162.1| hypothetical protein AM1_0074 [Acaryochloris marina MBIC11017] Length = 1736 Score = 57.6 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 38/295 (12%), Positives = 98/295 (33%), Gaps = 27/295 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI---- 58 R V+ L +++ G + + FI+ + ++ T + + + + + Sbjct: 25 RPVIGTALILLGILIWGGWRILGFIN-NELAPQIAKELTKSLNRPVLLGDVQSYSLTGLQ 83 Query: 59 -----LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113 +P + I+ K+ G K++ ++++ + L D+ + L Sbjct: 84 FGPSSVPAHTYSSNGRTIEDKDAG----KVQTVNVQFDVWKALWTRTLNLDVTLVDAELY 139 Query: 114 FYLSSKGVS-NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + G + + + + + L+ + V GG +ID + L +L ++ Sbjct: 140 LDQTEDGEWISTTLTQEDSEGLVKIQLDSLSVDGGE-AVIDPYGAEARTLRNLKGVLTLH 198 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK--IQLFPLAYPI 230 N + G++ + G + + K K + + + P PI Sbjct: 199 DNNEKLKVEG---NGTLDSGGKARLKGEWLQPSQSLKLDVKAKQVQITPLMGFVPTEIPI 255 Query: 231 II---DLFGNLFW---NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 I ++ G+ ++ +G V ++ + K G + Sbjct: 256 QIRSGEVDGDFQLTYQPQEPIQLTGTTEVKDADIRVPEQNIWVKAEEFQGELDVE 310 >gi|88810700|ref|ZP_01125957.1| hypothetical protein NB231_16508 [Nitrococcus mobilis Nb-231] gi|88792330|gb|EAR23440.1| hypothetical protein NB231_16508 [Nitrococcus mobilis Nb-231] Length = 360 Score = 57.6 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 30/257 (11%), Positives = 71/257 (27%), Gaps = 17/257 (6%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67 + L +++ +P + I G + + I IH+ + + Sbjct: 15 AVLTLIVLLVAVRIALPSLVL-----NYVNDTLDNIPGYQGRIA-DIDIHLWRG-AYKIQ 67 Query: 68 DIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 +I + + + + + L G + ++Y+ +P +NF KG Sbjct: 68 NIELVKTDSPVPKPLFAADTIDLSVLWSALFRGAVVA-EVYMTKPQVNFVAGKKGQEAQT 126 Query: 126 QRKSTMDMIHN----VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + +++ G I D SD + +N + S Sbjct: 127 GEDKEWTEVAQELVPINIDRFQAVNGSIHYYDFNSDPQVDVY-INNVDAVLRNLNNSRGK 185 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP-IIIDLFGNLFW 240 + ++ + + A + +L L I L + Sbjct: 186 GKERLAKLKVHA-LAMNHADVNLNLNIDPFAAKPDFNFDFRLLHLQMTRIREYLKAYAPF 244 Query: 241 NEKQPIYSGVFSVAGDF 257 + V +A Sbjct: 245 DANSGTLDLVVEMAAKD 261 >gi|253996558|ref|YP_003048622.1| hypothetical protein Mmol_1189 [Methylotenera mobilis JLW8] gi|253983237|gb|ACT48095.1| hypothetical protein Mmol_1189 [Methylotenera mobilis JLW8] Length = 434 Score = 57.6 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 102/273 (37%), Gaps = 37/273 (13%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI 83 P FI + + E+QA+ +G + + G ++ +LP P V + I + KI Sbjct: 12 PFFIPIKTYLNEAEKQASDKLGVSVTISSG-RLLLLPSPRVVINGVSIAENG----AIKI 66 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS----NWFQRKSTMDMIHNVIL 139 E L++ + S RV D++I++P + S+ GV ++ + V + Sbjct: 67 EQLTVTPSLSSIFS-APRVIDIHINKPVV----SNDGVDMMLALASKKTGDNSEPNMVNV 121 Query: 140 EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN 199 + + ++ + L LN++ S + +S +++ S G++ A T D Sbjct: 122 RHVKIDALQLDL------PKLSLPALNVEFSLLDGHQLSAVALKSADGTLSATVTPEQDG 175 Query: 200 -------KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY----- 247 K+ + N + + ++ L P I++ Sbjct: 176 HLISVLAKKLTLPVGLPMMIDNAVLEMHLKGQRLDVP-RIEMDLYGGKVNANLDLLWHKD 234 Query: 248 ---SGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 +G VAG + + +S K LSG Sbjct: 235 WRVNGKVKVAGLSVREPSKLIS-KAVYLSGQLS 266 >gi|284039044|ref|YP_003388974.1| hypothetical protein Slin_4190 [Spirosoma linguale DSM 74] gi|283818337|gb|ADB40175.1| conserved hypothetical protein [Spirosoma linguale DSM 74] Length = 395 Score = 57.6 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 33/267 (12%), Positives = 75/267 (28%), Gaps = 18/267 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++R L ++++ +P F+ + G I I ++ Sbjct: 1 MKRATKIFIALVVLLIIARLLLPYFVL--RYVNKTLADMGSYTGH----VEDIDIQLIRG 54 Query: 62 PSVFFKDIRID--QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + +RI + I + E+ L G++ ++ +P +NF S Sbjct: 55 -AYQIDGLRIRKINGKIKEPFIYIPKTDLSVEWKSLFKGKLV-SEVECYEPEVNFAFSES 112 Query: 120 GVSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 S+ + + + + + GR+ + + LS LQ R + Sbjct: 113 EASSQTGADVDWTAYLKKLLPISINRFAIINGRVDLTSLVTQPRADLSIRKLQGEIRNIR 172 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI---QLFPLAYPIII 232 + V+A G F N + + L + + Sbjct: 173 -NVEDKNKKLPSPVVASGDVPGYGGTMNFSANMNLLKEMPDFDYNLRFTDLQLVKLNPLA 231 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSK 259 + NL + ++ Sbjct: 232 KAYANLDFERGTVSVYSEMAMLNGKLN 258 >gi|70732594|ref|YP_262357.1| hypothetical protein PFL_5285 [Pseudomonas fluorescens Pf-5] gi|68346893|gb|AAY94499.1| Domain of Unknown Function (DUF748) family [Pseudomonas fluorescens Pf-5] Length = 976 Score = 57.6 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 32/278 (11%), Positives = 81/278 (29%), Gaps = 28/278 (10%) Query: 55 KIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113 +I + PF + + I + G + + L + L + + D+ +DQP Sbjct: 55 RIELNPFSLELTLWGLSIGEP--GKEQIAFDRLYANLQLDSLWKRALHLADVELDQPKTE 112 Query: 114 FYLSSKGVSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL- 162 +G N V +E+I + GG + D + Sbjct: 113 ILFDKEGKLNLLALFKLPASEPTPSDPNAKPFPVRIERIKLAGGYLHFKDLRPSEPIEFL 172 Query: 163 ---SDLNLQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANF------ 210 D L+ + + + +++ + G + G + S + Sbjct: 173 YNKLDFELKNLSTLPDDSADMTLVATGPEGGQIDWSGNFSVTPLTSEGTLKVTDGKMKAW 232 Query: 211 -PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK 269 P A+ L ++ + S + + ++ Sbjct: 233 WPYVRDAVPLVLEDGVVNLSTHYKFSLTKETELLLDNTSISVAPFAIKAPDGRPLARLER 292 Query: 270 SRLS-GNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 +S ++ +V + + + Q + ++ + D + Sbjct: 293 LDVSETTVDLAKQHVIVGKVRSQKLETWAALEADGQLD 330 >gi|300725912|ref|ZP_07059374.1| conserved hypothetical protein [Prevotella bryantii B14] gi|299776763|gb|EFI73311.1| conserved hypothetical protein [Prevotella bryantii B14] Length = 1548 Score = 57.6 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 40/339 (11%), Positives = 100/339 (29%), Gaps = 27/339 (7%) Query: 2 LRRVLIGLGFLFS--VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIH 57 ++++ + + +L T+ + A+ G +I+V G + + Sbjct: 1 MKKIWKWILVIVLTPFILFTIITLLFYFPPFQNWVANKVASVASEKTGMEISV-GHVSLE 59 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESK-----IEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112 + ++ ++ + D + K L R + LPLL ++ V ++ + Q L Sbjct: 60 F--PLDLAVENFKMIEHNDSLPQVKDTVTDASKLVARIQLLPLLKSQVEVDELRLQQVKL 117 Query: 113 NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 N R + +++ I + +++ D + L+ + Sbjct: 118 NTT-----HFIPDVRIKGVVGELSLVSHNIDLTKETLRLNDAQLLNSQLNVVLSDTVPPD 172 Query: 173 FLNIISPLSIDSIKGSVIAEG-TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 + + + V G T + K K L Sbjct: 173 TTPSKNFWKLFIDQVHVQKSGVTVHMPGDTIQVKAYLVDALAQKGF--------LDLKKS 224 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG-NFKISDGNVRISRYKL 290 I G L + Y F V + +++L+ + + ++ +++ + Sbjct: 225 IYQVGQLDVQDGHVQYDNRFKVHTQGLDVNHIDLNNLQLGVDSFYYQAPLLRLKMRKASF 284 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 + + + + L ES N Sbjct: 285 REKSGIILSKFTGPLMLDSTKILLPELELRTPESSLQAN 323 >gi|149179164|ref|ZP_01857732.1| hypothetical protein PM8797T_16882 [Planctomyces maris DSM 8797] gi|148841982|gb|EDL56377.1| hypothetical protein PM8797T_16882 [Planctomyces maris DSM 8797] Length = 1103 Score = 57.6 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 38/337 (11%), Positives = 99/337 (29%), Gaps = 43/337 (12%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFI--DWTDFREDFERQATLIV-GKKIAVKGGIKIHIL 59 + L LFS+V+ G + + + T + G + + + Sbjct: 5 KTFQWCLLILFSLVITGGGYGYYWWMRSDEMLKAGILEKITNHIPGLMLDMD---RAQFD 61 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRV-FDMYIDQPHLNFYLSS 118 V + R++ + + + L +I + +++P L + Sbjct: 62 FRRRVRIEGCRVNVVNHPDTIIDLPEVVVTLNQEKLARHQIIDVQKVVLNRPQLVLVRMA 121 Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ----VYFLSDLNLQISARFL 174 G NW + + L ++ ++ G + + + Q +L+L++ Sbjct: 122 DGTWNWEGLPEPVKSDNP--LPELVIERGSLSLKFERGAQGVPTTMTFQNLDLRLIPSGT 179 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL-------------KI 221 + SI + E +G +D I ++ +L ++ Sbjct: 180 SRYEIEGHTSIPQAGKLEISGYWDINTKLGSIAGSWSQLEFGPNLVRMATGISPELMNQL 239 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL---------------LNLELS 266 + + + D ++ FS+A + L Sbjct: 240 KTAMPSLQLKPDPATGMYDLGVSAQMDIQFSLARSSQNEPPQFQVLTHLREGKLKHPVLP 299 Query: 267 AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 ++G +++ + + LQ+ +S + Sbjct: 300 FPLRNIAGKVLVNNQRLEVQ--NLQAFNGETSFELKG 334 >gi|282896034|ref|ZP_06304064.1| Protein of unknown function DUF490 [Raphidiopsis brookii D9] gi|281199073|gb|EFA73944.1| Protein of unknown function DUF490 [Raphidiopsis brookii D9] Length = 1838 Score = 57.6 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 39/340 (11%), Positives = 90/340 (26%), Gaps = 33/340 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R I LG ++L+G + ++ T + + I + + Sbjct: 1 MTRGSIALGGSVLILLMGGMWWVRGFIQKELSPLAQKSLTSTLNRPINLGAVKGFSL--- 57 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 V F I + I+ + + L+ D+ + P + ++ Sbjct: 58 TGVQFAASSIPPTPTDPDKITIQAVDVSFNPWDLVVNRQIKLDVTLINPDIYIEQDNQQR 117 Query: 122 S-NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV--------YFLSDLNLQISAR 172 + I L K+ V+ R+ ++ + + ++ L L + Sbjct: 118 WISTTIAPPGEPGIIKTDLSKLSVRNARLVLVPNQKPESAGSNGRLPVPVTFLGLYGRVQ 177 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK-AISLKIQLFPLAYPII 231 S + + + TG + + N K+ + + ++ L I Sbjct: 178 LFTNNQTNSSQNNIERIKFDLTGK-NQSGGDISLEGNIDTKSTVSGDVNLKTKELYIADI 236 Query: 232 IDL-FGNLFWNEKQPIYSGVFSVAGDFS------------KLLNLELSAKKSRLSGNFKI 278 + L L + + + + S GN K Sbjct: 237 VGLVPAALSVKSGKINSDLKIQLTPEDPILVYGNASLEGISWQLPQTPQMFSNTQGNIKF 296 Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFS 318 + I S D++ N + Sbjct: 297 QGTGIEIDNLVSNYGKI--PLVAKG----SIDQKRGFNLT 330 >gi|159027873|emb|CAO89676.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 2045 Score = 57.6 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 36/326 (11%), Positives = 92/326 (28%), Gaps = 16/326 (4%) Query: 7 IGLGFLFSVVLVGAFTVP-LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65 + G + + + ++ + + + ++ + + V + + Sbjct: 28 LIFGGITLLGITSLGYFTTRYLVYERLTPILDNIFSEMLHRPVRVGKIEGFYFN---RIR 84 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS--N 123 I ++ + I+ + + LPLL G D+ + P + G N Sbjct: 85 IGKSEIPATDNSADSLSIDAIELGLNPLPLLLGLPLPVDVKLINPSIYLDQDKNGQWLDN 144 Query: 124 WFQRKSTMDMIHNVILE-KIHVKGGRIKIIDQESDQVYFL--SDLNLQISARFLNIISPL 180 + S +D + L V+ G I I + I + + Sbjct: 145 LEKIASNLDREALIRLNLGFQVEKGDITIQPYALKNPIEIKADGQGRFIDNQRQPLTYDF 204 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL--KIQLFPLAYPIIIDLFGNL 238 S + +K V +G S + + N+ ++L + + ++ N+ Sbjct: 205 SAEILKSQVKIQGETALKTGESQTNLQIDSLNLNELLTLIPRSNFQLNQGQVNANIALNI 264 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 K G + + +L+ + V + + + Sbjct: 265 PSWAKLNQTEGNGNFQVTDL-AGKFQPFQYPIKLTTKLNLQGDKVLVEQATASIGKIKTE 323 Query: 299 TDEDNKTKVSQDEENLLNFSENGAES 324 K +V+ L + + Sbjct: 324 V----KGEVNWQTGYHLKVALESVDL 345 >gi|86605603|ref|YP_474366.1| hypothetical protein CYA_0901 [Synechococcus sp. JA-3-3Ab] gi|86554145|gb|ABC99103.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab] Length = 1712 Score = 57.2 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 36/287 (12%), Positives = 83/287 (28%), Gaps = 30/287 (10%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66 +GLG + F D E + + +++ + ++ + V Sbjct: 133 LGLGLTAAAFGAAWGIGAYFQD--RVLPQVEATLSQAMRRQVELG---EVRFVAPWQVRL 187 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF-YLSSKGVSNWF 125 + I + I + + +F L V ++ ++QP L +G ++ Sbjct: 188 GESHI------EHLASIGSIDLSPDFWTWLQTGEWVLNITLNQPQLLLMETLDRGWADVQ 241 Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 + + + I ++GG + I + LQ A+ P Sbjct: 242 FQLPEGEGSLPLQGLNIRLQGGSLTAI-PLVGERRRFE--QLQGQAQVWLSAPPGEEGGG 298 Query: 186 KGSVIAEGTGNF----DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + S + A+F + +++L + PL + L Sbjct: 299 RASFQLSAALRSLEGEGGYPLQLRGVADFAQASGSVTLAARRLPLELLPSVLPAAPLTEV 358 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 E + L + L+G ++ + + R Sbjct: 359 EGEASLDLQV-----------LWGGERPWELTGQAQVQQARLGLERL 394 >gi|238797927|ref|ZP_04641418.1| hypothetical protein ymoll0001_35830 [Yersinia mollaretii ATCC 43969] gi|238718232|gb|EEQ10057.1| hypothetical protein ymoll0001_35830 [Yersinia mollaretii ATCC 43969] Length = 1278 Score = 57.2 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 108/340 (31%), Gaps = 29/340 (8%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66 + + ++++ G + I D+R + I G + V G ++ F P++ Sbjct: 7 TIIVVVALLVSGLRMMLPLI--NDYRPQIVAKVQSISGIPLEV-GFMQGTWETFGPTLEL 63 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 +DI +++ +++ + LL + DM Q ++ + N Sbjct: 64 RDISAKLPAA---YWQVQRVTLALDVWQSLLHWRWQFRDMTFYQLQMDLNTTLDEQQNSS 120 Query: 126 --QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISP 179 + I L+ ++ RI + + L+ LN + R IS Sbjct: 121 RNLETGNITDIFLRQLDHFDLRNSRISFLTPSGPRAEVEIPQLTWLNSRNRHRAEGQISL 180 Query: 180 LSIDSIKGSVIAEGTGNFDN---KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 +I+ G V+ + + + A+ IS + L Sbjct: 181 STINGQHGVVMVRMDLHDNQGILNNGTVYMQADNIDLKPWISRWLHNNTGLDSAEFSLAA 240 Query: 237 NLFWNEKQPIYSGVFSVAGDFSK----LLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 L + +YSG ++ + + +L+ L G + + + + L++ Sbjct: 241 WLSIKSGE-VYSGNVLLSQGQANWTVADKSHQLAVDNFVLEGRRQGNGWQIDAPQLSLKT 299 Query: 293 -------ILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 ++ +N + D+ L + Sbjct: 300 DGQAWPQGQLSALWLPENTQFIGPDQSQELRIRATNIQLE 339 >gi|209885122|ref|YP_002288979.1| hypothetical protein OCAR_5994 [Oligotropha carboxidovorans OM5] gi|209873318|gb|ACI93114.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5] Length = 1151 Score = 57.2 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 51/400 (12%), Positives = 103/400 (25%), Gaps = 83/400 (20%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLF-----IDWTDFREDFERQATLIVGKKIAVK----- 51 LRR L G L V VG F + L I+ +G+ V+ Sbjct: 20 LRRTLATFGVLALVFGVGFFGLWLRLGAGPINLDFVTPWLASAIEENLGRNHTVEVGGTQ 79 Query: 52 ----GGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 G I++ +V +DI + + +R + LL G +R + + Sbjct: 80 IERAGRIRV------AVRLRDIVVRDANKAI-VATAPKAEVRLSGMALLFGTLRAETLRL 132 Query: 108 DQPHLNFYLSSK--------GVSNWFQRKSTMDMIHNV---------------------- 137 L ++ G + Sbjct: 133 VDAGLAVRITPDGEIIVSTAGTMQPLATGRVPVKPLVIAPSESTPAPASAPDETGQPQVA 192 Query: 138 -------------------------ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 L +I ++ G + + DQ+S + +NL + Sbjct: 193 VASAPGLLAVMDWLDTLGSKGLDGQSLNEIGLRNGSLIVDDQQSKTEFSFEHINLSLRRP 252 Query: 173 FLNIISPLSIDSIKGSVIAE-GTGNFDNKRSAFKITANF-PAKNKAISLKIQLFPLA--- 227 ++ + + G G +N AN P +N ++ +++ F Sbjct: 253 SSGGVTLTVGEDGPDAWSLRVGVGAPENGVRPVHFVANKVPTQNLILAARLKDFTYTTAG 312 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 P+ ++ G + + +G S+ GD + R + Sbjct: 313 MPLSGEIKGEVGRDGLPTYLAGTLSIGKGDIIDRSTPDYPMPIDRFDVRLDWDASRRVMV 372 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 Q + + +G + Sbjct: 373 AP-FQVTSGANRVTSLAHLEAPNGHTPNWQLGLSGGTIVL 411 >gi|325578667|ref|ZP_08148743.1| deoxycytidine triphosphate deaminase [Haemophilus parainfluenzae ATCC 33392] gi|325159706|gb|EGC71837.1| deoxycytidine triphosphate deaminase [Haemophilus parainfluenzae ATCC 33392] Length = 395 Score = 57.2 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 33/299 (11%), Positives = 78/299 (26%), Gaps = 41/299 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ +VL F +I + I V + +LP Sbjct: 1 MKKI----AISLLIVLFAIFAF-FYIQLNQLKNSIADHLAQ---YDIQVH-DFSLSLLPQ 51 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V + Q E + + PL SG + ++ I L Sbjct: 52 PTVNLSGLTYHQ-------LSAENIEAKFALFPLFSGNPILEEVQITHFKL--------S 96 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + L+ I I + + L+L N + Sbjct: 97 EQALNHTNIHGRFSDFSLKNIF--NQNIAFKGESAVT------LSLDKPLYGTNTQYQFA 148 Query: 182 IDSIKGSVIAEGT-------GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 ++ +G + + + I ++ L P + Sbjct: 149 FSKGNINLNHQGKNLIQFVNARLNQQPLGY-IETYIDFSKPVKTVNAYLQPDCQNCLATF 207 Query: 235 FGNLFWNEKQPIYSGV-FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + + +SG F +A + L + + +++ + + + Sbjct: 208 KFSHKELQSAVNFSGKNFPMAQLIALLNFPNTLTGNTDFNIQLALTNSELTKGEFYFDA 266 >gi|149378038|ref|ZP_01895762.1| predicted membrane protein [Marinobacter algicola DG893] gi|149357693|gb|EDM46191.1| predicted membrane protein [Marinobacter algicola DG893] Length = 1243 Score = 57.2 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 64/191 (33%), Gaps = 18/191 (9%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFI--DWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPF 61 ++ L V++ + I + ++R E++ + +G+ + + G + Sbjct: 24 LIWWLLLAVIVLMALYAGIGRQITQNINEYRSSIEQRLSSELGQPVTI-GALSSSWNWLD 82 Query: 62 PSVFFKDIRIDQKEDGSFES-KIEGLSMRAE-FLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 P++ +DI + + D S + ++ + + + L+ I D D L + + Sbjct: 83 PTIVARDIVVVSENDRSDVAGSLKSVRIGLDFLASLMRLRIVFADFDADGLELTINQTPR 142 Query: 120 GVSNWFQRKSTMDMIHNVILE-----------KIHVKGGRIKIIDQESDQVY-FLSDLNL 167 G + +++ L + V + I D + + L+L Sbjct: 143 GAVTVEGVDIPDPVANDLELWLDIAGEWLSDPSVKVTRLDLGIRDANGALRHVEVPQLDL 202 Query: 168 QISARFLNIIS 178 + Sbjct: 203 IYRRGLFHASG 213 >gi|330909289|gb|EGH37803.1| putative exported protein [Escherichia coli AA86] Length = 1250 Score = 57.2 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 85/305 (27%), Gaps = 24/305 (7%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDI 69 +V +P +R + + G + + P++ DI Sbjct: 2 IAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSASWQNFGPTLEAHDI 57 Query: 70 RIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQR 127 R + K+ G ++ +++ + LL + D+ Q S + G N Sbjct: 58 RAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTSITSGGGNDSLE 115 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSID 183 S + + + ++ + + + L+ LN R ++S S+ Sbjct: 116 ASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHRAEGLVSLSSLT 175 Query: 184 SIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFW 240 G + D S ++ + L +Q L G + Sbjct: 176 GQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIALETAQFSLEGWMTI 235 Query: 241 NEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 ++ G + L+ + + + S +P++ Sbjct: 236 DKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQFS-------IPDTRI 288 Query: 300 DEDNK 304 D K Sbjct: 289 TMDGK 293 >gi|312885413|ref|ZP_07745054.1| AsmA family protein [Mucilaginibacter paludis DSM 18603] gi|311302111|gb|EFQ79139.1| AsmA family protein [Mucilaginibacter paludis DSM 18603] Length = 807 Score = 57.2 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 54/409 (13%), Positives = 125/409 (30%), Gaps = 38/409 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFR--EDFERQATLIVGKKIAVKGGIKIHI- 58 L+ VL L V+L+ L+I+ + + + K+ + G ++ Sbjct: 5 LKIVLKVFASLVVVILILVIAAMLYINSNKKKVLTLVTTELNKNLDGKLTI-GTMESSFF 63 Query: 59 --LPFPSVFFKDIRIDQKEDGS---FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113 P S+ ++ + + + LL G I + + I ++ Sbjct: 64 KSFPGVSLSLHNVLLRDNRWPEHHHTLLDAKNFDVSVNTAALLRGTISINHIDISNAAID 123 Query: 114 FYLSSKGVSNWFQRKSTMDM--------IHNVILEKIHVKGGRIKIIDQESDQ--VYFLS 163 Y S G SN K + L + ++K + DQ++++ + + Sbjct: 124 LYTDSSGYSNTSVFKKNKQPKKANDGDANSSAELHQFNLKDVGFAVNDQKANKLFQFTIH 183 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIA-EGTGNF-DNKRSAFKITANFPAKNKAISLKI 221 LN +++ + + +D + S+ + G+F NK + A + + I++ Sbjct: 184 QLNGKMTYPDSGWHAAVHLDVLANSMAFNKANGSFIKNKTVEGDLVAGYNEDSGKINVSS 243 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------- 271 F + + L ++ +S + + + LSA S+ Sbjct: 244 DRFNIGGNL-FKLKALFVTGKRPAQFSIKLAANQITWRGASALLSANISKTLNMFNLGKP 302 Query: 272 --LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 + + + + N++ + + + L + ++ D N Sbjct: 303 FDVKATIAGDFEGGGSPYLNVTATVRNNTLTMPGGNIEACNFDGLYTNNNVPSQGFTDEN 362 Query: 330 ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378 N K D + N NF + Sbjct: 363 SVIRLLHLTGVYNNLPFKVD----TCNIINLAKPIATGNFTSNFPLTNL 407 >gi|119470455|ref|ZP_01613183.1| hypothetical protein ATW7_18088 [Alteromonadales bacterium TW-7] gi|119446380|gb|EAW27656.1| hypothetical protein ATW7_18088 [Alteromonadales bacterium TW-7] Length = 1287 Score = 57.2 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 37/331 (11%), Positives = 94/331 (28%), Gaps = 18/331 (5%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60 R++ + ++ V + + + D++ D E +++ G I Sbjct: 12 RKLWQTCAIILVLLAVIVSILKYTLPYANDYKGDIETYLDEKFAISLSI-GAISASWQGN 70 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPH-----LNF 114 P++ +D+ E I S+ + +++ I+ H + Sbjct: 71 GPALVLEDLSFKDNETAPISLTIAKTSLELNLWESIKTLQLKSNYFVINGFHTTVNVADL 130 Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII-DQESDQVYFLSDLNLQISARF 173 + S F++K ++ + ++ I + D ++ L ++ Q Sbjct: 131 FESGNQDDVSFEQKELIEGLFLGNTGHFAIENSSINFVLDDNKERKLLLENIIWQNEESQ 190 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSA-----FKITANFPAKNKAISLKIQLFPLAY 228 L++ I + + + AN + ++ I Sbjct: 191 HLGSGTLALPGITVG-TFDARIALKGESLEEVAGNMYVQANKVDVSNWLAQYINTEKQQL 249 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR-ISR 287 I+L L + S + S G F + + Sbjct: 250 TSDINLQAWLKIEKGLID-DIKMQWLPSSVTWFKEAQSQQVSLSEGGFHLYPEQGNWFLK 308 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFS 318 + N++T + + E N + + Sbjct: 309 STGLAFNNNNTTWPSLEFEAQLGENNQIWLN 339 >gi|237798587|ref|ZP_04587048.1| hypothetical protein POR16_07100 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021440|gb|EGI01497.1| hypothetical protein POR16_07100 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 1271 Score = 56.8 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 32/252 (12%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 +R D E +AT +G +++ G ++ F P + D+ + + G+ +++ + + Sbjct: 43 YRVDVETKATSALGMPLSI-GRLEGSWSRFAPVLLAHDVMVGE---GATALRLDRVRVVP 98 Query: 91 EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149 + LL+ E+R+ + +D G NW + + E++ + + Sbjct: 99 DLWGSLLAREVRIAHLEVDGLQFILRQDQDG--NWAVQGLPVRDDSPFDPEQVLNQVQAV 156 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208 + + QV + +A LS+ + + D + A + + Sbjct: 157 EHLSLLGSQVT----VQPYDAAPMTLTYVDLSLATGPYHQRLDARLTLPDGQPFALNVRS 212 Query: 209 ---NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 K + L + + W+ G ++ + + Sbjct: 213 RIQASQWKEGEADIYASLPQSDWAKWLPKSLTREWSLSTLQAGGEVWMSWGKGTVQSATA 272 Query: 266 SAKKSRLSGNFK 277 ++ G + Sbjct: 273 RLNAPQIKGAYA 284 >gi|301058334|ref|ZP_07199367.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300447570|gb|EFK11302.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 1210 Score = 56.8 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 40/338 (11%), Positives = 102/338 (30%), Gaps = 50/338 (14%) Query: 18 VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-- 75 G F +P + FR E +A+ + + V+ ++ V + ++ Sbjct: 16 AGVFFMPKMVSTQWFRHQLETRASEFFHQAVTVQ---ELRWTWKDGVRIRGLKAADDPKF 72 Query: 76 DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------- 124 ++ L + +F L + + D N G +N Sbjct: 73 GKEPLLSVDDLHLYVDFE--LKPARLLIQLEGDGLKANLVRKKDGHANLEEWLAQLKSSP 130 Query: 125 ----FQRKSTMDMIHNVILE---KIHVKGGRIKIIDQESDQVYFLS-------------- 163 S+ + + ++ KI + R++ D+ +++ + Sbjct: 131 ATSEAAPISSPNSPFVLPVDLAAKIKLTHVRVRAEDRMENRLLEIQQGALTLKMPSLLSS 190 Query: 164 --DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221 DLN P ++ + + D + + ++ P + A+ + Sbjct: 191 PIDLNFNSQGSMDGKAMPPIALAVHVNHLMNEDRALDPQGTEVRVNGELPGLHTALDGTM 250 Query: 222 QLFPLAYPIIIDLFGNLF-----WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF 276 L + IDL L ++ P SG + + ++ + + + Sbjct: 251 ARKGLQGKVKIDLASFLKTAQPFLSDTLPEVSGEILLQTTAQLETDNTIAFHMNLICKSI 310 Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314 G +R + + + + + ++S N+ Sbjct: 311 LAKGGPLR----EKRVGPFSLTLTQKGSAELSSKTVNI 344 >gi|198284704|ref|YP_002221025.1| hypothetical protein Lferr_2624 [Acidithiobacillus ferrooxidans ATCC 53993] gi|198249225|gb|ACH84818.1| hypothetical protein Lferr_2624 [Acidithiobacillus ferrooxidans ATCC 53993] Length = 416 Score = 56.8 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 32/289 (11%), Positives = 84/289 (29%), Gaps = 21/289 (7%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68 +F ++++ F R E + + + + H + Sbjct: 2 AAVFILLMLVVLGGVFFWFAGGPRYAVEEFLAGRLRQPVYLAANPGWHWGKQELRIVLPG 61 Query: 69 IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128 +R+ + +++ + LL G +++ + +D P L N Sbjct: 62 LRLGPTD--LPLFSASRITVALPWRALLHGRVQLQRIELDTPVL----------NAPWTG 109 Query: 129 STMDMIHNVIL-EKIHVKGGRIKIIDQESDQVYFLSDLN---LQISARFLNIISPLSIDS 184 + + L ++ V+ G ++ + L+ ++ L L + Sbjct: 110 AANASGAALSLPGRVVVRDGTLRWS-GVAGHTLSLTAVHGQVLADGPSRLVGDWHWRDKT 168 Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 + A T + + + + I ++ W E++ Sbjct: 169 GRWHFAAGMTSAPTLQARRISLLVGTARDPALLQVGIPTLQSVSGELVLPTMRARWQEQK 228 Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLS--GNFKISDGNVRISRYKLQ 291 S V + L+ ++ L+ + + V ++ KLQ Sbjct: 229 QG-SARLDVQALHLNMAQGRLAMQQGALTVGNDLSLQIRAVALNWKKLQ 276 >gi|229588412|ref|YP_002870531.1| hypothetical protein PFLU0868 [Pseudomonas fluorescens SBW25] gi|229360278|emb|CAY47135.1| putative conserved exported protein [Pseudomonas fluorescens SBW25] Length = 1271 Score = 56.8 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 84/269 (31%), Gaps = 21/269 (7%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 +R + E +A V + + G ++ F P + D+ + + GS +++ + + Sbjct: 43 YRAEVEVKAQAAVQMPLHI-GSLEGRWSGFAPVLLAHDVMVGE---GSSALRLDQVEVVP 98 Query: 91 EFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI--LEKIHVKGG 147 + L E+R+ + + L+ G D + L+++ V Sbjct: 99 DIWASLMAREVRIAHLQVSGLQLSVKEDKDGHWALQGLPVQDDQPLDPEQLLKRMQVVK- 157 Query: 148 RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKI 206 R+ ++D + L A LS+ + + D + A + Sbjct: 158 RVSLLDSQVT-------LQPFDHAPVTLTYVGLSLHTGATRQRLDARLTLPDGQPLAVSL 210 Query: 207 TA---NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL 263 K + + L + I W Q G F + + + Sbjct: 211 RTRIRASQWKEGEVQAYLSLPQSDWAKWIPAKLTQQWKLTQFKAGGEFWLNWAKGTVQSA 270 Query: 264 ELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + ++ G++ V I L + Sbjct: 271 VVRLNSPQVKGSY-ADRKPVHIENLALTA 298 >gi|315125439|ref|YP_004067442.1| hypothetical protein PSM_A0336 [Pseudoalteromonas sp. SM9913] gi|315013952|gb|ADT67290.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913] Length = 1282 Score = 56.8 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 27/308 (8%), Positives = 90/308 (29%), Gaps = 20/308 (6%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60 R++ + ++ V + + + D++ D E +++ G I Sbjct: 12 RKLWQISAVILVLLAVIVSILKYTLPYANDYKGDIESYLDDKFDISLSI-GAISASWQGS 70 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNFYLSSK 119 P++ +++ + I S+ L + + I+ H +++ Sbjct: 71 GPALVLEELSFKDNQTAPISLTIAKTSLELNLWESLKSLQFKSNYFVINGFHTKVNVANL 130 Query: 120 GVSNWF----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFL 174 N ++K ++ + ++ I + +++ + L ++ Q + Sbjct: 131 FAGNQDEVSFEQKELIEGLFLGETGHFAIENSSISFVLEDNKERKLLLENIVWQNQDKQH 190 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 L++ I + + + L +Q + + Sbjct: 191 LGSGSLALPGISVG-NFDARIALKGETL----------EQMVGDLYVQANQVDVSNWLAQ 239 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 + N + + + + + ++++ S ++ V +S Sbjct: 240 YINTQKQQLHSDLNLQAWLRLEQGLVSDVKVQWLPSAVNWQLNEQTQKVSLSEGGFHLYP 299 Query: 295 PNSSTDED 302 +S Sbjct: 300 EQNSWRLK 307 >gi|320104579|ref|YP_004180170.1| hypothetical protein Isop_3056 [Isosphaera pallida ATCC 43644] gi|319751861|gb|ADV63621.1| hypothetical protein Isop_3056 [Isosphaera pallida ATCC 43644] Length = 480 Score = 56.8 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 89/306 (29%), Gaps = 51/306 (16%) Query: 10 GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDI 69 + +++ G L T R+ RQ G ++ + I + + + + Sbjct: 14 AGVAGLLIFGVGYGALVWIATVARDRIARQLEDQTGHRVELGRVIPWGLG---TFWVQGA 70 Query: 70 RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKS 129 + + + + L S + ++ P + F+ G + + Sbjct: 71 AVTAPRTDTPWFVADSIRFERPTLGFGSQ----VKLTLNHPTMRFHRRPDGCYDPTDALA 126 Query: 130 TM--------------------------DMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 + + + ++ G ++ D + + Sbjct: 127 QSHQRRAPSASPRAAVDGSSVVSFEVGRTPPNPLDDVYLEIRHGVVEWRDPDVQLDVRVE 186 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 ++ + + E G + ++ F + + P +++ +L+ QL Sbjct: 187 EVEGVAFWLGSSSTVVVQ----------EAQGRLADGQARFAVQVHAPKRDQGWTLEGQL 236 Query: 224 F-------PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK-SRLSGN 275 P ++ + + + + P SG A K L+ SA+ RL G Sbjct: 237 QLRRVNPTPSLIKLLGRVAPVVTVSGEVPAISGPAPQAHSVPKSLDPIESARLFGRLQGE 296 Query: 276 FKISDG 281 + Sbjct: 297 LYLETR 302 >gi|186477462|ref|YP_001858932.1| hypothetical protein Bphy_2714 [Burkholderia phymatum STM815] gi|184193921|gb|ACC71886.1| conserved hypothetical protein [Burkholderia phymatum STM815] Length = 380 Score = 56.4 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 30/277 (10%), Positives = 79/277 (28%), Gaps = 39/277 (14%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 RV+ + +++V A F+ + + I + I + Sbjct: 8 RVMAAIAGAIVLLVVLAAIGLYFVQRE-VKARVVDALA-----PVGTADRIDVGIS---A 58 Query: 64 VFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKG 120 + +R+ +D + ++M + L + + + + + +L +S G Sbjct: 59 ITLHRVRLTAPQDWPTPDALTADEITMTPDVRDYLFAHRMHLRSVVVRGFNLALVRTSSG 118 Query: 121 VSNWFQR-------------------KSTMDMIHNVILEKIHVKGGRIKIIDQ---ESDQ 158 + + + +++ I GR D+ + Sbjct: 119 RLEILPKLRQSMSKPAQPSSGASGAATNKPPLPAEKLIDHIAFADGRFVFYDETISKPPY 178 Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218 +SD + + L +S + S+KG++ G R F +K+ + Sbjct: 179 KVVVSDASASVDHIHLPDLSEPTGISMKGAI----KGPSHTGRVTFDGWMTIASKDSKTT 234 Query: 219 LKIQ-LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254 ++ + + + A Sbjct: 235 TTLKGVDVVTLDPYLLKKAGAKAQVTGGTLDLNLQAA 271 >gi|170719915|ref|YP_001747603.1| hypothetical protein PputW619_0729 [Pseudomonas putida W619] gi|169757918|gb|ACA71234.1| protein of unknown function DUF748 [Pseudomonas putida W619] Length = 978 Score = 56.4 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 90/308 (29%), Gaps = 31/308 (10%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKI 83 I +Q ++ +I + PF + ++I + G + Sbjct: 24 FLIVPGVALRIANQQLAQYATLPANLQ---RIELNPFSLELTLWGLQIGEP--GKEQVGF 78 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------FQRKSTMDM 133 E L L SG + + + +D+P + G N + + Sbjct: 79 ERLYANLALDSLWSGALHLQAIELDKPRNEVLFAKDGTLNLTQLFKLPASEPKPEEPASD 138 Query: 134 IHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQISARFLNIISPLSIDSIK----- 186 + + I + G + DQ + D+NL++ + + Sbjct: 139 PFPLRIGSIKLSAGYLHFADQRPSEPIEFIYDDMNLELKNLSTLPDDNADMTLVALGPNG 198 Query: 187 GSVIAEGTGNFDN--KRSAFKITANF-----PAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 G + GT + + KIT P A+ L ++ + L + Sbjct: 199 GRIDWNGTLSLAPIASKGTLKITDGKMKLFWPYVRDAVPLVLEDGVVNLDTHYTLNLSKE 258 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GNFKISDGNVRISRYKLQSILPNSS 298 S + + + +S + ++ V + + + + + ++ Sbjct: 259 TELLLDNTSVRVAPFAIKAPDGRPLVRLASLDVSETSIDLAKQLVTVGKIRSEKLETWAA 318 Query: 299 TDEDNKTK 306 ++D + Sbjct: 319 LEQDGQLD 326 >gi|127512431|ref|YP_001093628.1| hypothetical protein Shew_1502 [Shewanella loihica PV-4] gi|126637726|gb|ABO23369.1| protein of unknown function DUF748 [Shewanella loihica PV-4] Length = 1119 Score = 56.4 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 49/373 (13%), Positives = 117/373 (31%), Gaps = 54/373 (14%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92 + +Q + + + +++ ++ I PF V D I +K D + L + +F Sbjct: 49 QQIPKQLSNQIQRPVSLT---QVKINPFTLEVELTDFAIKEKND-QPFVGFKRLGLNIQF 104 Query: 93 L-PLLSGEIRVFDMYIDQPHL--------------------NFYLSSKGVSNWFQRKSTM 131 LL + + D+ ++ PH +SK Sbjct: 105 WDSLLQQGLSLTDITLENPHAEVKRLESDEALRFNFSDILETLAKNSKAQPEPEPEPEGG 164 Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS------------- 178 I + IL+ + + + ++D+ + +NL++++ + Sbjct: 165 KTIPHFILKNLAIVDANLHLLDEITQGEVSYPKVNLKVASFDSHNPIVATKMSGDAAKPK 224 Query: 179 PLSIDSIKGSVIAEGTGN--------FDNKRSAFKITANFPAKNKAISLKIQ-LFPLAYP 229 PL S+ A N + A K +++ + Sbjct: 225 PLEGQSLDAKNDAAQKANRYHMEFHSDRGGKIALKGQVQLTPFELVGDVRLSHIDLPQLW 284 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN--VRISR 287 +D ++ ++ ++ + VA D L SA + S + + + R Sbjct: 285 TFVDKAFHVSLDKGYVDFATEYRVAMDD-DQLEASTSAGELSFSDLLITHEQRELISLGR 343 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347 + L I + + + ++ + L + + DL K K+ + Sbjct: 344 FALSGIAADLGQQQVDVAALTSSD---LLVNARLDDKGIDLVALLAPIGNGDKAKSTETP 400 Query: 348 KDDIQYSVNKKEE 360 K + +++ E Sbjct: 401 KATDNSTASEQAE 413 >gi|298209120|ref|YP_003717299.1| hypothetical protein CA2559_12788 [Croceibacter atlanticus HTCC2559] gi|83849047|gb|EAP86916.1| hypothetical protein CA2559_12788 [Croceibacter atlanticus HTCC2559] Length = 401 Score = 56.4 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 40/324 (12%), Positives = 101/324 (31%), Gaps = 24/324 (7%) Query: 12 LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71 + +++V +P F+ + + I G V+ I I + V + + Sbjct: 27 IIVLLIVARLLLPYFV-----KNYVNKTLANIPGYYGQVE-DIDIALWRGAYV-IHGLYL 79 Query: 72 DQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY------LSSKGVSN 123 ++ + E + E+ +L G+I ++ + PH+N+ S G ++ Sbjct: 80 NKLDGVTQVPFLNFEKTDISIEWDAILDGKIV-SEIEMTNPHINYVFEDQQATSEDGDAD 138 Query: 124 WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + + + ++ V G++ + ++ L + +SA L + Sbjct: 139 IDDWTKALTDLVPIDVNRLQVTNGKLAFVQLATEPNIDLYLDQVNLSATNLR---NVKEK 195 Query: 184 SIKGSVIAEGTG-NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242 + + K N + + + + L P I + L + Sbjct: 196 QRILPSDVTANAISIGQGKVDLKGKINLLKQIPDMDITLSLKDANLPAINSMTSGLAGID 255 Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 + SG F V +F+ + K +S I + + + Sbjct: 256 FE---SGTFDVYSEFAIADSYLKGYVKPLISDAKYIGKEDGIFETI-WEGFVSFFDFILT 311 Query: 303 NKTKVSQDEENLLNFSENGAESMH 326 N + + + ++ Sbjct: 312 NPSTDNLATNVPFEGDLSATQANV 335 >gi|9106086|gb|AAF83936.1|AE003948_8 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 1251 Score = 56.4 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 31/286 (10%), Positives = 75/286 (26%), Gaps = 21/286 (7%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92 + ++ G+ + + P + + +RI I + + Sbjct: 16 QQVADWLSVRTGQPVRFD-TLNTSWTQRGPLLRLQGVRI----GPQGRMAIGEVEVLVAM 70 Query: 93 LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN---VILEKIHVKGGRI 149 L + ++ + L + S G + + + L ++ V GGR+ Sbjct: 71 YTGLLPGHSLIELRLRGMALTVHRDSAGRWSVYGLPRDVGGDPLEVLRRLGELQVIGGRL 130 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209 + S LS +NL++ + + + G +FD + Sbjct: 131 SVDAPSSGVSTTLSQINLRVRVAGDRLRAGVHGWLDSARAPVTGVVDFDRVSGDGDVYVE 190 Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI-------YSGVFS---VAGDFSK 259 A + + + D G++ + G G Sbjct: 191 TLPNQLASWSSLLAGVMRGVHLRDGAGHVRAWAQLHRHHVEQVTVQGDLQGVRFEGVRLA 250 Query: 260 LLNLELSAKKSRLSG--NFKISDGNVRISRYKLQSILPNSSTDEDN 303 + +L ++ R+ +L+ D Sbjct: 251 GQTVVPRVFWPQLQALVRWQRQGDGWRVVAPRLRMGESGRLQKLDG 296 >gi|189462814|ref|ZP_03011599.1| hypothetical protein BACCOP_03512 [Bacteroides coprocola DSM 17136] gi|189430430|gb|EDU99414.1| hypothetical protein BACCOP_03512 [Bacteroides coprocola DSM 17136] Length = 1530 Score = 56.4 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 42/375 (11%), Positives = 109/375 (29%), Gaps = 31/375 (8%) Query: 2 LRRVLIGLGFLFS--VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIH 57 +++ L G + +L + ++I R A+ G +I++ G I + Sbjct: 1 MKKYLRWTGIAVASPFILFILLCILIYIPPIQNFLVNTATRYASEATGMQISI-GRISLS 59 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 + + I K+D + L+ + + PLL +I + + + + +N Sbjct: 60 F--PLDLVVNNTVIIDKQD--TILNAKKLTAKIQLTPLLRKKIELDGLELSKASVNTANL 115 Query: 118 SKGV-------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 +G+ + I+ + +K + I ++ S + Sbjct: 116 IEGMTLKGNLGELFVSSHGVELDPETAIVNTLSLKDTHLSICMADTTASDTTSSQPVFWK 175 Query: 171 ARFLNIISPLSIDSIKGSV----------IAEGTGNFDNKRSAFKITANFPAKNKAISLK 220 + N+ +++ + + + + N + L Sbjct: 176 IQLKNVDFENVSFAMQMPLGTFSMSTSLEKLSLRNGLVDLHKSAYSAGSLKLTNGSAYLD 235 Query: 221 IQLFPLAYPIIIDLFG--NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278 P A G N+ + Y+G A L + G Sbjct: 236 TNTLPAAEGFDASHIGITNIKLDVDSAYYAGNDIYANIRDFNLKERSGLEIVSTKGKLVS 295 Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL---NFSENGAESMHDLNETDFFE 335 +++ ++ + + + E++ + + ++ T E Sbjct: 296 DAKTLKVPSLQITTPDSYLEFSASMDWEATDAEKDGMINARLMADIGKNDLLKVITGMPE 355 Query: 336 EEEKKNKNDDLKKDD 350 + KK + L+ Sbjct: 356 DFIKKYPSAPLQIRA 370 >gi|166367100|ref|YP_001659373.1| hypothetical protein MAE_43590 [Microcystis aeruginosa NIES-843] gi|166089473|dbj|BAG04181.1| hypothetical protein MAE_43590 [Microcystis aeruginosa NIES-843] Length = 2045 Score = 56.4 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 34/325 (10%), Positives = 87/325 (26%), Gaps = 13/325 (4%) Query: 6 LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65 LI G + + ++ + + + ++ + + V + + Sbjct: 28 LIVGGITLLGITSLGYFTTRYLVYERLTPILDNIFSEMLHRPVRVGKIEGFYFN---RIR 84 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS--N 123 I + + I+ + + LPLL G D+ + P + G N Sbjct: 85 IGKSEIPATANSADSLSIDAIELGLNPLPLLLGLPLPVDVKLINPSIYLDQDKNGQWLDN 144 Query: 124 WFQRKSTMDMIHNVILE-KIHVKGGRIKIIDQESDQVYFL--SDLNLQISARFLNIISPL 180 + S D + L V+ I I + + I + N+ Sbjct: 145 LDKISSNFDREAPIRLNLGFQVEKAAINIQPYALKKPIEIKADGQGRFIDNQKQNLTYDF 204 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 S + +K V +G S + + ++ ++L ++ L Sbjct: 205 SAEILKSQVKIQGETALKTGESLTNLQIDRLNLSELLTLIPNRNFQLNQGQVNANIALNI 264 Query: 241 NEKQPIYSGVFSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 + + + +L+ + V + + + Sbjct: 265 PSWAKLNQSQGNGNFQVTEVAGKFQPFQYPIKLTTKLNLQGDKVLVEQATATIGKIKTEV 324 Query: 300 DEDNKTKVSQDEENLLNFSENGAES 324 + +V+ L + + Sbjct: 325 ----RGEVNWQTGYHLKVALESVDL 345 >gi|320202155|gb|EFW76730.1| hypothetical protein ECoL_00783 [Escherichia coli EC4100B] Length = 1250 Score = 56.0 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 84/305 (27%), Gaps = 24/305 (7%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDI 69 +V +P +R + + G + + P++ DI Sbjct: 2 IAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSASWQNFGPTLEAHDI 57 Query: 70 RIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQR 127 R + K+ G ++ +++ + LL + D+ Q + G N Sbjct: 58 RAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPITSGGGNDSLE 115 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSID 183 S + + + ++ + + + L+ LN R ++S S+ Sbjct: 116 ASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHRAEGLVSLSSLT 175 Query: 184 SIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFW 240 G + D S ++ + L +Q L G + Sbjct: 176 GQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIALETAQFSLEGWMTI 235 Query: 241 NEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 ++ G + L+ + + + S +P++ Sbjct: 236 DKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQFS-------IPDTRI 288 Query: 300 DEDNK 304 D K Sbjct: 289 TMDGK 293 >gi|320184034|gb|EFW58856.1| hypothetical protein SGF_03800 [Shigella flexneri CDC 796-83] Length = 1250 Score = 56.0 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 84/305 (27%), Gaps = 24/305 (7%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDI 69 +V +P +R + + G + + P++ DI Sbjct: 2 IAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSASWQNFGPTLEAHDI 57 Query: 70 RIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQR 127 R + K+ G ++ +++ + LL + D+ Q + G N Sbjct: 58 RAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPITSGGGNDSLE 115 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSID 183 S + + + ++ + + + L+ LN R ++S S+ Sbjct: 116 ASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHRAEGLVSLSSLT 175 Query: 184 SIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFW 240 G + D S ++ + L +Q L G + Sbjct: 176 GQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIALETAQFSLEGWMTI 235 Query: 241 NEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 ++ G + L+ + + + S +P++ Sbjct: 236 DKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQFS-------IPDTRI 288 Query: 300 DEDNK 304 D K Sbjct: 289 TMDGK 293 >gi|264678340|ref|YP_003278247.1| AsmA [Comamonas testosteroni CNB-2] gi|262208853|gb|ACY32951.1| AsmA [Comamonas testosteroni CNB-2] Length = 745 Score = 56.0 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 43/439 (9%), Positives = 107/439 (24%), Gaps = 88/439 (20%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPS------------VFFKDIRID 72 F+DW R + + G+ A+ G +++ P P + D+ + Sbjct: 55 FMDWNKLRPWINEKVSTSAGRDFAINGDLQLQWTWPQPLDTGWRHWVPGVVLHASDLTLS 114 Query: 73 QK------------EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ----------- 109 Q +D + LP +D Sbjct: 115 QPQGWLVRQAPEKADDKQPVLPATPKELNTGRLPEQDQVANEKKTSVDDEDAIADAGRQP 174 Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ----------- 158 P + + + + +V L+ + ++ + + + + Sbjct: 175 PERDARTMITAANATASLRLWPLLARHVQLDSLLLQAPDMVLARNDKGENNWTFDKPASS 234 Query: 159 ---------VYFLSDLNLQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKR 201 +SD L S N+ D+++ V G + Sbjct: 235 GPKWSFEIGQLRISDGVLGWSDAVKNMAVRARFDTLRRPVSADQPYGVRFGLAGYLHQGK 294 Query: 202 SAFKITAN------FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255 + +I A + + +++ A + G L + + G Sbjct: 295 TRAQIQAQGLAGPVLDLRQDRLRFPLRISAKAGSLQAFAEGILDNPKTLDGLDFQVQIRG 354 Query: 256 DFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 L RL G+ + +++ + + + Sbjct: 355 KSMADLFELSGLLLPATPPFETSGRLIGSLAPGKAVWQYEKFQGKLGQSD----LRGDLQ 410 Query: 307 VSQDE-ENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDDLK---KDDIQYSVNKKEEK 361 + L + + DL +K + +++ ++ Sbjct: 411 YRSAQPRPKLTAQLHSKQLRLVDLGPVIGAAPSGSPDKPQPVNGKVLPQVRFQTENWDKM 470 Query: 362 DNSHDKENQENFSGDKMIL 380 D E+ + + L Sbjct: 471 DLDLRYESSHILRPEALPL 489 >gi|299532180|ref|ZP_07045574.1| AsmA family protein [Comamonas testosteroni S44] gi|298719842|gb|EFI60805.1| AsmA family protein [Comamonas testosteroni S44] Length = 745 Score = 56.0 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 43/439 (9%), Positives = 107/439 (24%), Gaps = 88/439 (20%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPS------------VFFKDIRID 72 F+DW R + + G+ A+ G +++ P P + D+ + Sbjct: 55 FMDWNKLRPWINEKVSTSAGRDFAINGDLQLQWTWPQPLDTGWRHWVPGVVLHASDLTLS 114 Query: 73 QK------------EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ----------- 109 Q +D + LP +D Sbjct: 115 QPQGWLVRQAPEKADDKQPVLPATPKELNTGRLPEQDQVANEKKTSVDDEDAIADAGRQP 174 Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ----------- 158 P + + + + +V L+ + ++ + + + + Sbjct: 175 PERDARTMITAANATASLRLWPLLARHVQLDSLLLQAPDMVLARNDKGENNWTFDKPASN 234 Query: 159 ---------VYFLSDLNLQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKR 201 +SD L S N+ D+++ V G + Sbjct: 235 GPKWSFEIGQLRISDGVLGWSDAVKNMAVRARFDTLRRPVSADQPYGVRFGLAGYLHQGK 294 Query: 202 SAFKITAN------FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255 + +I A + + +++ A + G L + + G Sbjct: 295 TRARIQAQGLAGPVLDLRQDRLRFPLRISANAGSLQAFAEGILDNPKTLDGLDFQVQIRG 354 Query: 256 DFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 L RL G+ + +++ + + + Sbjct: 355 KSMADLFELSGLLLPATPPFETSGRLIGSLAPGKAVWQYEKFQGKLGQSD----LRGDLQ 410 Query: 307 VSQDE-ENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDDLK---KDDIQYSVNKKEEK 361 + L + + DL +K + +++ ++ Sbjct: 411 YRSAQPRPKLTAQLHSKQLRLVDLGPVIGAAPSGSPDKPQPVNGKVLPQVRFQTENWDKM 470 Query: 362 DNSHDKENQENFSGDKMIL 380 D E+ + + L Sbjct: 471 DLDLRYESSHILRPEALPL 489 >gi|320175958|gb|EFW51034.1| hypothetical protein SDB_01561 [Shigella dysenteriae CDC 74-1112] Length = 1250 Score = 56.0 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 84/305 (27%), Gaps = 24/305 (7%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDI 69 +V +P +R + + G + + P++ DI Sbjct: 2 IAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSASWQNFGPTLEAHDI 57 Query: 70 RIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQR 127 R + K+ G ++ +++ + LL + D+ Q + G N Sbjct: 58 RAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPITSGGGNDSLE 115 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSID 183 S + + + ++ + + + L+ LN R ++S S+ Sbjct: 116 ASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHRAEGLVSLSSLT 175 Query: 184 SIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFW 240 G + D S ++ + L +Q L G + Sbjct: 176 GQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIALETAQFSLEGWMTI 235 Query: 241 NEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 ++ G + L+ + + + S +P++ Sbjct: 236 DKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQFS-------IPDTRI 288 Query: 300 DEDNK 304 D K Sbjct: 289 TMDGK 293 >gi|325104967|ref|YP_004274621.1| protein of unknown function DUF490 [Pedobacter saltans DSM 12145] gi|324973815|gb|ADY52799.1| protein of unknown function DUF490 [Pedobacter saltans DSM 12145] Length = 1672 Score = 56.0 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 46/389 (11%), Positives = 108/389 (27%), Gaps = 38/389 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ + +G + ++L + L + + + + ++ + Sbjct: 9 LKIIAWIVGGIVGLILAIIILLQLPAVQNFAKNKVVSYLESKIKTPVRID---RLQLGLP 65 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + + + ++ E + + LL ++ + ++ + N + V Sbjct: 66 KKLVLSGVYF-ESQEQDTLLAGERIGVDISLFKLLKNQVEINEIDLKGITANVVRNQDSV 124 Query: 122 SNWF-------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 N+ + ++KI + +IK D S LN Sbjct: 125 FNFDYIIKAFASEQKKEPKPEDTTSTMKFSIDKIKLDRVKIKFDDAISKNA-----LNFY 179 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 + I + + + + S K Sbjct: 180 VGHFDTRIK-----KFDLDHLDFDVP-KITMSDLNLNLKQGIVGEIVQKSSKAVNEAANS 233 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 PI+ G L +++ + + + L L +S K L G I ++ + Sbjct: 234 PILKLNLGELDFSKIRIGFDNEGTKLNTSLDLGKLLISFNKIDLDGQV-IDIRDILVKDL 292 Query: 289 KLQSIL---PNSSTDEDNKTKVSQDEENLLNFSENGAESMH---DLNETDFFEEEE---K 339 +L + T E K + + + + + DLN + + Sbjct: 293 NGNLVLGKILKNKTVEVPKDTIGNTNWRAILSNADFSNINFRFDDLNSKPVTKGIDYMHM 352 Query: 340 KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 +LK D YS + S + E Sbjct: 353 SLSGMNLKAKDFYYSTDTISGNILSFNAE 381 >gi|254445917|ref|ZP_05059393.1| conserved domain protein [Verrucomicrobiae bacterium DG1235] gi|198260225|gb|EDY84533.1| conserved domain protein [Verrucomicrobiae bacterium DG1235] Length = 1026 Score = 56.0 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 37/319 (11%), Positives = 92/319 (28%), Gaps = 28/319 (8%) Query: 3 RRVLIGLGFLFSVVL-VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R+LI LF++ L G + VP ++ + +G+++ + + PF Sbjct: 13 KRILISGLVLFTLYLCFGIWGVPAI-----LVSQAQKHGSEALGREVTIG---RASFNPF 64 Query: 62 -PSVFFKDIRIDQKEDGSF-ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 ++ I + + S K+ LS + + G I + + I+ + + Sbjct: 65 SFETKIYNLVIAEADGKSGSLLKVGKLSANVQLSSVF-GTILLKSVEIEDSDIWITKDAA 123 Query: 120 GVSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQE--SDQVYFLSDLN 166 G ++ + + K V + D SD L+ + Sbjct: 124 GRLSFQDVLDGFNAEATPDEEEPSSEITAQIMKTSVDNFNLHFTDSSLPSDYEETLTIES 183 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 + G +F L Sbjct: 184 FNGRDIGTVEKVSIKSSDTGGPAY---HWDFGGVVKTASGANLAIDGGATGQLPWSFELN 240 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 A L + ++ I ++ DF+ + L + ++G+ ++ ++ Sbjct: 241 ASLADFPLASLQAYIDESVIAQVEGALGFDFNAQIVLAEEGAEIVVAGDLGLNGFSISDP 300 Query: 287 RYKLQSILPNSSTDEDNKT 305 + ++ + + Sbjct: 301 EQEFVALESLTFSGLRADA 319 >gi|229592630|ref|YP_002874749.1| hypothetical protein PFLU5247 [Pseudomonas fluorescens SBW25] gi|229364496|emb|CAY52342.1| putative membrane protein [Pseudomonas fluorescens SBW25] Length = 972 Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 33/308 (10%), Positives = 86/308 (27%), Gaps = 31/308 (10%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKI 83 I +Q ++ +I PF V ++I + G + Sbjct: 24 FLILPGIALRIANQQLANYATVPARIE---RIEFNPFSLEVTAWGLQIGEP--GKEQVGF 78 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----------RKSTMDM 133 E L + L + + + D+ +D+P G N Q Sbjct: 79 ERLYANLQIDSLWTRALHLADIQLDKPKTELLFDKSGQLNLAQLFKLPPSEPTPTDPDAK 138 Query: 134 IHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLNLQISARFLNIISPLSIDSI---K 186 + ++ I + G + D + D L+ + + +++ + Sbjct: 139 PFPLRIDSIKLAAGYVHFQDLRPSEPIEFLYDTLDFELKNLSTLPEDNADMTLVAAGPEG 198 Query: 187 GSVIAEGTGNFDNKRSAFKITANF-------PAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 G + +G + S + P A+ L ++ L + Sbjct: 199 GQIDWKGNFSLVPITSEGTLKVTGGKMKAWWPYVRDALPLVLEDGVLNFSTEYTFSLAKE 258 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GNFKISDGNVRISRYKLQSILPNSS 298 K + + + + ++ +S ++ V + + + + ++ Sbjct: 259 TELKLTNTAASIAPFSIKAPDGRPLVRLERLDVSETTVDLAKQQVVVGKIRSNKLETWAA 318 Query: 299 TDEDNKTK 306 + D + Sbjct: 319 LEADGQLD 326 >gi|220921329|ref|YP_002496630.1| hypothetical protein Mnod_1327 [Methylobacterium nodulans ORS 2060] gi|219945935|gb|ACL56327.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 599 Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 91/299 (30%), Gaps = 14/299 (4%) Query: 36 FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDI--RIDQKEDGSFESKIEGLSMRAEFL 93 E + G+ V+GG + + P +V +D+ R D G+ I L + L Sbjct: 33 VEERLEAETGRPWTVRGGATLSLWPTVAVVVRDVGTRTDYPGVGTASLDIASLKVTGAPL 92 Query: 94 PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIID 153 L++G + ++ +++P L + + + + E+I V+ G + +++ Sbjct: 93 DLIAGRGLLRELEVERPVLRWP-AEWWRAGPAPGSGSGPAQPGPRPERIRVREGALLLVN 151 Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213 E+ V L + + AR + + G+ + + P + Sbjct: 152 GEA-TVASLEGIAAEAVARPGGFEVQATGRTGGGTCEVAAAPPGEASPGEAGKGESVPLR 210 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS 273 ++ PLA + G + G +G L + Sbjct: 211 FTCRLPRLGPEPLAGSADAAVHGAALTLSRLSGSLGAAPFSGAVVVDLAAKPFV------ 264 Query: 274 GNFKISDGNVRISRYK---LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 ++ + + + + D + K + A L Sbjct: 265 -RIDLASEALTLPAGAPPGAEDLDLGLLRSFDGRAKARIGALRAGGLTLTDASLDAKLT 322 >gi|46202344|ref|ZP_00053360.2| COG2982: Uncharacterized protein involved in outer membrane biogenesis [Magnetospirillum magnetotacticum MS-1] Length = 874 Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 95/303 (31%), Gaps = 20/303 (6%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGL 86 +D +R E +A+ ++ +K+ V G I + ILP P+V + ++ + ++ + Sbjct: 28 MDGDAWRGRIETEASALLRRKVTVAGPISLRILPSPAVTLAAVAVEGT------ASLDRV 81 Query: 87 SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG 146 + LL+G ++ D+ ++ + + + + ++ K Sbjct: 82 RLGLSLGSLLAGRPQLDDVVMEGGRVGPLVDLSLRAVTTGESFAISGSA-----RLWGKS 136 Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN-KRSAFK 205 ++ + ++ L +S L + KG++ + + + R Sbjct: 137 ATLEAKGRRPTSTESMAPLKAAVSLPSLESGASFDGSFGKGALSGKLDVSLASLARFTGS 196 Query: 206 ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 + L++ + +L + +G + L+++ L Sbjct: 197 AQLPDAPLSAQAELRLSPDEVVIS-------DLGVILGESTITGSVVASLTAPALMDVTL 249 Query: 266 SAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 A L + + ++ + S +G + Sbjct: 250 RADSFDLDSRRAAISAKTEQPKSATATTTATPASQPQQTAQPSPAASQPFELP-HGLAAN 308 Query: 326 HDL 328 D+ Sbjct: 309 LDV 311 Score = 39.1 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 18/177 (10%), Positives = 56/177 (31%), Gaps = 18/177 (10%) Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITA-----------NFPAKNKAISLKIQLFPLAY 228 LS+ S + + G + + A + A+ + ++ Sbjct: 385 LSLGSSAAPIRGKLEGKVQLAENRLALNALTLDLDERRVTGMISAGLALPIPLKAELGLP 444 Query: 229 PIIIDLFGNLF---WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 + + G L + + + F+ A + +S + + ++G + + Sbjct: 445 GLALGFDGVLSDGRIDGGASLRAAGFAQAIRALAPGYHPRGNGELAVSAHVEGANGLITL 504 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342 + + ++ K +S + + L + G D +++ +++K Sbjct: 505 TDLQAKAGEA----QITGKASLSLEGQPKLTANLAGNAIGLDPFLPAPNQDKGEESK 557 >gi|197287439|ref|YP_002153311.1| hypothetical protein PMI3636 [Proteus mirabilis HI4320] gi|194684926|emb|CAR47103.1| putative exported protein [Proteus mirabilis HI4320] Length = 1267 Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 36/328 (10%), Positives = 88/328 (26%), Gaps = 27/328 (8%) Query: 2 LRRV-----LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 ++R+ LI L L +V + ++R + E + + + Sbjct: 1 MKRLSKSLLLITLFCLIIFAVVLSGFRYFLPRLDNYRPEIETYLSKQFNSPVTMTQVKGE 60 Query: 57 HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN-- 113 P + + ID S E E ++ + LL ++ ++ +Q +N Sbjct: 61 WQNFGPDIQITGLYIDNN---SVEVSAEQITFSFDVWRSLLHFQLYFRELTFEQLAVNYK 117 Query: 114 --FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQIS 170 + G + + I ++ + R + D + +L Sbjct: 118 KPIFTGQNGDITF-TEPDDISSIFLKQFDRFKLVDSRFVFLSPSGDTSTLHIPELMWLNQ 176 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 +++D+ ++ + + + + + Sbjct: 177 KNRHRAQGEVTLDTPIN--------HYGGLKVRLDLYTKKQGALDKGQVFVTADEVDISP 228 Query: 231 IID--LFGNLFWNEKQPIYSGVFSVAG--DFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 + + N E + S ++ L + R G + I Sbjct: 229 WLSQWVKSNSGLGEAKASLSNWIEISNGRITGSQLQIHQGEMDWRNEGRTHVLKVEDLIL 288 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENL 314 R + Q + K + DE Sbjct: 289 RMRRQENGWLADIPYTRKITMDGDEWPD 316 >gi|257093912|ref|YP_003167553.1| hypothetical protein CAP2UW1_2334 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046436|gb|ACV35624.1| hypothetical protein CAP2UW1_2334 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 625 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 28/297 (9%), Positives = 82/297 (27%), Gaps = 31/297 (10%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE 84 +F + + E G+ V G +++ P P + + + E ++ Sbjct: 237 MFFPYALYLPAVEGALAQSTGEPAKV-GEMRVSFYPQPGLLLGKVVL-GAETEGNVVRVA 294 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV 144 + ++ LLS I ++ + L S +S + + + Sbjct: 295 EMRLQPALATLLSPRIVFRNVQLSGIQLTAETMG---SLARMLESAARGSARAGVSHVAL 351 Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204 I + ++ + ++ +S+ S ++ E Sbjct: 352 DKAEISF------SGLGVDEMKGEFGLSTDGLLQSVSLHSPDRNLQLEARPIAGGVAIQL 405 Query: 205 KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE 264 + PA + + ++ GN F E+ + G ++ + Sbjct: 406 EGLGWRPAPQSPY------LMDSLTVKGEILGNAFVIERM-----ELRIFGGLAEGTAIL 454 Query: 265 LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321 + ++ L+G ++ + + + + + + Sbjct: 455 RAERQPALAGEMSFE---------RIDAKRFGEAFGIGGQFEGQAAGRLKFSATAES 502 >gi|332163142|ref|YP_004299719.1| hypothetical protein YE105_C3522 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667372|gb|ADZ44016.1| hypothetical protein YE105_C3522 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 1274 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 36/308 (11%), Positives = 103/308 (33%), Gaps = 23/308 (7%) Query: 13 FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71 ++++ G + I D+R + I G + V G ++ F P++ +DIR Sbjct: 2 VALLVSGLRMMLPLI--NDYRPQIVAKIQSISGIPLEV-GFMQGTWETFGPTLELRDIRA 58 Query: 72 DQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSN--WFQRK 128 + +++ +++ + LL + DM Q L+ + + + Sbjct: 59 KLPKAD---WQVQRVTLALDVWQSLLHRRWQFRDMTFYQLQLDLHTTLDRQQSNGNSFEA 115 Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSIDSIKG 187 ST+ I L+ ++ RI + + + L S+ +S+ +I G Sbjct: 116 STITDIFLRQLDHFDLRNSRISFLTPSGPRAELEIPQLTWLNSSSRHRAEGQISLSTING 175 Query: 188 SV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 + + + + ++ +Q + I + + + Sbjct: 176 QHGVLMVRMDLHDNQGILS----------NGTVYMQADNIDVKPWISRWLHTNTGLESAE 225 Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN-KT 305 +S ++ ++ + + ++ + + + + + L+ + D + Sbjct: 226 FSLAAWLSIKSGEIYSGNVLLRQGQANWTVEGESHQLAVDNLVLEGSRHGNGWQIDAPEL 285 Query: 306 KVSQDEEN 313 + D + Sbjct: 286 SLKTDGQP 293 >gi|332765245|gb|EGJ95472.1| putative protease [Shigella flexneri 2930-71] Length = 1250 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 85/305 (27%), Gaps = 24/305 (7%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDI 69 +V +P +R + + G + + P++ DI Sbjct: 2 IAALLVSGLRIALPHL---NAWRPEILNKIESATGMPVE-ASQLSASWQNFGPTLEAHDI 57 Query: 70 RIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQR 127 R + K+ G ++ +++ + LL + D+ Q + G S+ Sbjct: 58 RAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPITSGGSDDSLE 115 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSID 183 S + + + ++ + + + L+ LN R ++S S+ Sbjct: 116 ASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHRAEGLVSLSSLT 175 Query: 184 SIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFW 240 G + D S ++ + L +Q L G + Sbjct: 176 GQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIALETAQFSLEGWMTI 235 Query: 241 NEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 ++ G + L+ + + + S +P++ Sbjct: 236 DKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQFS-------IPDTRI 288 Query: 300 DEDNK 304 D K Sbjct: 289 TMDGK 293 >gi|320181515|gb|EFW56433.1| hypothetical protein SGB_01386 [Shigella boydii ATCC 9905] Length = 1250 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 85/305 (27%), Gaps = 24/305 (7%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDI 69 +V +P +R + + G + + P++ DI Sbjct: 2 IAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSASWQNFGPTLEAHDI 57 Query: 70 RIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQR 127 R + K+ G ++ +++ + LL + D+ Q + G S+ Sbjct: 58 RAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPVTSGGSDDSLE 115 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSID 183 S + + + ++ + + + L+ LN R ++S S+ Sbjct: 116 ASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHRAEGLVSLSSLT 175 Query: 184 SIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFW 240 G + D S +I + L +Q L G + Sbjct: 176 GQHGVMQVRMDLRDDEGLLSNGRIWLQADDIDLKPWLGKWMQDNIALETAQFSLEGWMTI 235 Query: 241 NEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 ++ G + L+ + + + S +P++ Sbjct: 236 DKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQFS-------IPDTRI 288 Query: 300 DEDNK 304 D K Sbjct: 289 TMDGK 293 >gi|83643637|ref|YP_432072.1| chromosome segregation ATPase [Hahella chejuensis KCTC 2396] gi|83631680|gb|ABC27647.1| Chromosome segregation ATPase [Hahella chejuensis KCTC 2396] Length = 563 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 74/234 (31%), Gaps = 10/234 (4%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 R L +G++F +++V FID + E + T V K+ V + + P Sbjct: 2 RALKFVGYIFVLLIVIVIAALFFIDI-IAKFAIEEEGTKAVKAKVEVD-SVDVRFFP-LG 58 Query: 64 VFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 +++ + + E + ++ PLL ++ V ++ N S G Sbjct: 59 ASIYGLKVTNPQAPMTNAFEAELIDANLDWEPLLKSKVIVETAALEGMRFNTARSVTG-- 116 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 T L + ++ ID D L+ ++L+ + + + LS Sbjct: 117 --AVPGLTPPPSQEPSLVDQFKEDMKLPAID-IPDPSELLARVDLKTVSMAKEMEASLSA 173 Query: 183 DSIKGSVIAEG-TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 + + +I A AKN L+ Sbjct: 174 RKKAWKERIDALPNKETLESYKQRIKALKEAKNPLERLQAVAKVKDLQSDAKKD 227 >gi|320189592|gb|EFW64251.1| hypothetical protein ECoD_04599 [Escherichia coli O157:H7 str. EC1212] Length = 1250 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 85/305 (27%), Gaps = 24/305 (7%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDI 69 +V +P +R + + G + + P++ DI Sbjct: 2 IAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSASWQNFGPTLEAHDI 57 Query: 70 RIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQR 127 R + K+ G ++ +++ + LL + D+ Q + G S+ Sbjct: 58 RAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPITSGGSDDSLE 115 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSID 183 S + + + ++ + + + L+ LN R ++S S+ Sbjct: 116 ASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHRAEGLVSLSSLT 175 Query: 184 SIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFW 240 G + D S ++ + L +Q L G + Sbjct: 176 GQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIALETAQFSLEGWMTI 235 Query: 241 NEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 ++ G + L+ + + + S +P++ Sbjct: 236 DKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQFS-------IPDTRI 288 Query: 300 DEDNK 304 D K Sbjct: 289 TMDGK 293 >gi|318603974|emb|CBY25472.1| putative exported protein [Yersinia enterocolitica subsp. palearctica Y11] Length = 1274 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 36/308 (11%), Positives = 103/308 (33%), Gaps = 23/308 (7%) Query: 13 FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71 ++++ G + I D+R + I G + V G ++ F P++ +DIR Sbjct: 2 VALLVSGLRMMLPLI--NDYRPQIVAKIQSISGIPLEV-GFMQGTWETFGPTLELRDIRA 58 Query: 72 DQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSN--WFQRK 128 + +++ +++ + LL + DM Q L+ + + + Sbjct: 59 KLPKAD---WQVQRVTLALDVWQSLLHRRWQFRDMTFYQLQLDLHTTLDRQQSNGNSFEA 115 Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSIDSIKG 187 ST+ I L+ ++ RI + + + L S+ +S+ +I G Sbjct: 116 STITDIFLRQLDHFDLRNSRISFLTPSGPRAELEIPQLTWLNSSSRHRAEGQISLSTING 175 Query: 188 SV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 + + + + ++ +Q + I + + + Sbjct: 176 QHGVLMVRMDLHDNQGILS----------NGTVYMQADNIDVKPWISRWLHTNTGLESAE 225 Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN-KT 305 +S ++ ++ + + ++ + + + + + L+ + D + Sbjct: 226 FSLAAWLSIKNGEIYSGNVLLRQGQANWTVEGESHQLAVDNLVLEGSRHGNGWQIDAPEL 285 Query: 306 KVSQDEEN 313 + D + Sbjct: 286 SLKTDGQP 293 >gi|325298930|ref|YP_004258847.1| hypothetical protein Bacsa_1816 [Bacteroides salanitronis DSM 18170] gi|324318483|gb|ADY36374.1| protein of unknown function DUF490 [Bacteroides salanitronis DSM 18170] Length = 1532 Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 38/393 (9%), Positives = 108/393 (27%), Gaps = 29/393 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+ I + F + ++ V L R A+ G +I++ +I + Sbjct: 5 IRRLGIIVASPFILFVLICVLVYLPPIQNFLVRTATRYASEATGMQISIG---RISLGFP 61 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + + G + L+ + + LPLL ++ + + + + G+ Sbjct: 62 LDLVVHRALVVN--QGDTIADAGRLTAKVQLLPLLKKQVELDGLELSDTRFHTADLISGM 119 Query: 122 S-------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + ++ ++ +K R+ + ++ + + + Sbjct: 120 RLEGEIGSVFVSSHGVDLSPETAVVNQLTLKDTRLSMCLADTAAQDTAASAPVYWKFQLQ 179 Query: 175 NIISPLSIDSIKGSVIAEG------TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 I +++ + + A + + Sbjct: 180 KIDFENVSFALQMPLDTLSMAVSLHRLALREGNADLHRMAYSARSFALEEGRFSFDTGSL 239 Query: 229 -PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK------LLNLELSAKKSRLSGNFKISDG 281 P + L + I AG+ + L + + G Sbjct: 240 PPAEVGLDPSHIAVTGLNIGMDSLYYAGNDIRAFIRTFELKERSGLEITSGEGRLVSDAH 299 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341 +++ + ++ + + + D + A M D+ + D + Sbjct: 300 ALQVPSFSIK----TQDSALELNASMDWDAMDAGKEGTVQARLMADIGKNDLLKLVTGIP 355 Query: 342 KNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374 + + V + + K Q +F+ Sbjct: 356 ADFVRQYPSRPLQVRAGIDGSLNDLKLTQLSFA 388 >gi|317474879|ref|ZP_07934148.1| hypothetical protein HMPREF1016_01127 [Bacteroides eggerthii 1_2_48FAA] gi|316908782|gb|EFV30467.1| hypothetical protein HMPREF1016_01127 [Bacteroides eggerthii 1_2_48FAA] Length = 1513 Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 105/335 (31%), Gaps = 40/335 (11%) Query: 1 MLRRVLIGLGFLFS--VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56 M R+ L G ++ +VL + L++ R+ A+ G I+V+ I + Sbjct: 1 MRRKWLKGALWVLLTPIVLFVILMILLYVPPVQNFIRKQATAIASDATGMNISVE-RIDL 59 Query: 57 HILPFPSVFFKDIRIDQKEDG-------SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 ++ + +++ Q E + L++ + PLL G + V + + Q Sbjct: 60 RF--PLNLLVRGVQVVQSEADAADVQHPDTLLNLGSLNVSVQAWPLLQGRVEVNAITLQQ 117 Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHNVILEK---------IHVKGGRIKIID------- 153 +N +G+ H + L+K + ++ + D Sbjct: 118 VAVNSSNLLEGMHIKGTLGRFFLESHGIDLKKEDAILNNVELSNTHMQVMLADTTETPKD 177 Query: 154 -QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212 E+ + ++ NL++ +++ PL +++ ++ G + ++ K Sbjct: 178 STETAVNWRIALHNLKLKNVSVDLQMPLDSMALRANI---GDASIEDANLDLKRQFYGWR 234 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL------NLELS 266 + + + + I G + Sbjct: 235 RFTLTESAVNYDLGMAAPVEGFDASHIALRDIRIGIDSVMACGRDMNAIIREFSMYDRSG 294 Query: 267 AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 + L+G +RI +L++ + Sbjct: 295 LTVTSLTGRLFADSTLIRIPYLQLKTPHSDMDLTA 329 >gi|323137719|ref|ZP_08072795.1| hypothetical protein Met49242DRAFT_2183 [Methylocystis sp. ATCC 49242] gi|322397016|gb|EFX99541.1| hypothetical protein Met49242DRAFT_2183 [Methylocystis sp. ATCC 49242] Length = 1166 Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 54/414 (13%), Positives = 109/414 (26%), Gaps = 70/414 (16%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTV----PLFIDWTDFREDFERQATLIVG--KKIAVK 51 LRRV G L V + F + PL W + G + Sbjct: 32 LRRVATGLGLGALLLLCVSVGAFFLLLSRGPLTFSW--LAPKIVESLDELAGGRYDFQLA 89 Query: 52 GGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111 G + P++ + + K DG + + LL G I+ + + Sbjct: 90 GAAIANTDHGPTLSVDGLVV--KTDGRAILAAPRAELSLDLASLLVGRIQPRRLEVLDLD 147 Query: 112 LNFYLSSKGVSNWFQRKST----------------------------------------- 130 L + + G Sbjct: 148 LRLSVQADGAIAVSAGADPLATTKPAVAPTENAASPAVAPAARVALLRAAAGALRGLMDL 207 Query: 131 --MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188 L+++ V GR+ I D+ D+V +D+ L + ++ L+ Sbjct: 208 ATSPTSPIGALDRLGVLHGRLVIDDRTLDRVIQYNDVTLSLDKGVSSMRFSLAASGPSRR 267 Query: 189 VIAEGTGNFD-NKRSAFKIT---ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 A +R F + + F P+ ++L L +++ Sbjct: 268 WAATAVAKGAPGQRRDFLAQLHDLSIDEAALIGGFRTTRFDTDAPMSLNLGFALSPDDRI 327 Query: 245 PIYSGVFSVAGDFSKLLNLE---LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 +G V F +L + + + L+ ++ V +S + + + S Sbjct: 328 IEAAGHVEVGHGFFRLEEPDHEPVMIDRLALTASWDEEGRKVVLSPIEFAAGGFDMSIAG 387 Query: 302 DNKTKVSQ--DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353 + + + LN E K ++K + Sbjct: 388 EAAAPADVPAGADPG----ADAWTIALRLNRPTVVAPERAGEKIVKIEKGSLAA 437 >gi|289209149|ref|YP_003461215.1| membrane protein-like protein [Thioalkalivibrio sp. K90mix] gi|288944780|gb|ADC72479.1| membrane protein-like protein [Thioalkalivibrio sp. K90mix] Length = 1300 Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 23/223 (10%), Positives = 62/223 (27%), Gaps = 16/223 (7%) Query: 29 WTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLS 87 W E E A+ +G I I++ + P++ + + +D G +E L Sbjct: 36 WDGLDEWVETTASAQLGYPIH-TDEIELGWSGWSPALVARGVSVDL--SGEEPLHLERLR 92 Query: 88 MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVIL-----EKI 142 + L + + + + G + + + + + + Sbjct: 93 LSLSAGATLRSRFPSMQVEVAGAEVRVVREADGAIHVHGYEVGLGDGALLEIPVERWPDL 152 Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG-------TG 195 I D+ + L L + + + +++G+ + Sbjct: 153 EASEVHITWEDRGAGLESVLDVRRLAVRTDARSRLRVFLDGAMQGAADGDFVLGVEVPDA 212 Query: 196 NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 + R +++ P + L+G + Sbjct: 213 TARDARFFLDTQPVALGAWSPWLVRLGWEPPPGTTALRLWGEI 255 >gi|56752314|ref|YP_173015.1| hypothetical protein syc2305_c [Synechococcus elongatus PCC 6301] gi|81300597|ref|YP_400805.1| hypothetical protein Synpcc7942_1788 [Synechococcus elongatus PCC 7942] gi|56687273|dbj|BAD80495.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81169478|gb|ABB57818.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 1568 Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 33/332 (9%), Positives = 98/332 (29%), Gaps = 24/332 (7%) Query: 31 DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 E+Q T +G+ I + + V ++ + ++ Sbjct: 46 WLIPQAEQQLTAALGQPIQLGNIEGWNWD---GVRLGQSQLGTVSG-PSFVSWQTTTVGI 101 Query: 91 EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIK 150 ++ L G + + ++ + S G W+ + + L K+ V GG++ Sbjct: 102 DWAGLFQGRL-PLQLRLENVDASLQQLSNGQ--WYTFPTQAQISEYPDL-KLVVAGGKLS 157 Query: 151 IIDQESDQVYFLS--------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202 + + + + L L R + +G V E G + + Sbjct: 158 LQPRNTQNQLLVPIRLSAIAGHLQLSQEQRARFQATAQLSTGQRGWVAGEIQGGRNGEIR 217 Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLL 261 P + ++ ++L +A +L ++Q +G + K Sbjct: 218 LRSQQVALPEVQRLLAQTLRLPAIAEAGTASGNLSLQLRDQQVTAINGSAQLQSATLKAT 277 Query: 262 NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321 + + + +++ + D + + + + + Q L + + Sbjct: 278 EVPVRLQ--QVTAALQFQDRQITVQ--RGTARWQDWRIQGQGNWTFDQGGTIQLTTTASS 333 Query: 322 AESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353 + + + + ++++ + Sbjct: 334 STAR---SPLPGLKLGGPLQAQLNIEQAREAF 362 >gi|218129098|ref|ZP_03457902.1| hypothetical protein BACEGG_00672 [Bacteroides eggerthii DSM 20697] gi|217988733|gb|EEC55052.1| hypothetical protein BACEGG_00672 [Bacteroides eggerthii DSM 20697] Length = 1513 Score = 55.3 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 104/335 (31%), Gaps = 40/335 (11%) Query: 1 MLRRVLIGLGFLFS--VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56 M R+ L G ++ +VL + L++ R+ A+ G I+V+ I + Sbjct: 1 MRRKWLKGALWVLLTPIVLFVILMILLYVPPVQNFIRKQATAIASDATGMNISVE-RIDL 59 Query: 57 HILPFPSVFFKDIRIDQKEDG-------SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 ++ + +++ Q E + L++ + PLL G + V + + Q Sbjct: 60 RF--PLNLLVRGVQVVQSEADAADVQHPDTLLNLGSLNVSVQAWPLLQGRVEVNAITLQQ 117 Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHNVILEK---------IHVKGGRIKIID------- 153 +N +G+ H + L+K + ++ + D Sbjct: 118 VAVNSSNLLEGMHIKGTLGRFFLESHGIDLKKEDAILNNVELSNTHMQVMLADTTETPKD 177 Query: 154 -QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212 E+ + ++ NL++ +++ PL ++ ++ G + ++ K Sbjct: 178 STETAVNWRIALHNLKLKNVSVDLQMPLDSMALGANI---GDASIEDANVDLKRQFYGWR 234 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL------NLELS 266 + + + + I G + Sbjct: 235 RFTLTESAVNYDSGMAAPVEGFDASHIALRDIRIGIDSVMACGRDMNAIIREFSMYDRSG 294 Query: 267 AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 + L+G +RI +L++ + Sbjct: 295 LTVTSLTGRLFADSTLIRIPYLQLKTPHSDMDLTA 329 >gi|255036770|ref|YP_003087391.1| hypothetical protein Dfer_3011 [Dyadobacter fermentans DSM 18053] gi|254949526|gb|ACT94226.1| conserved hypothetical protein [Dyadobacter fermentans DSM 18053] Length = 1532 Score = 55.3 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 40/332 (12%), Positives = 91/332 (27%), Gaps = 43/332 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQ----ATLIVGKKIAVKGGIKIH 57 LR + GL + VL+ + + + + +G I + G + I Sbjct: 5 LRALGNGLIVVIIFVLLALGIATTALQLPSVQTWAVQHLTANVSGKLGYPITI-GRVNIK 63 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS---GEIRVFDMYIDQPHLNF 114 V +++ + + + + ++ EI + ++ + QP+++ Sbjct: 64 WFDV--VSLENVSVKDTSGAD-MIDVGRIDVNLNVNNIIRDSAKEIFLDEVNVYQPNVHL 120 Query: 115 YLSSK-GVSNWF---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQES-- 156 + + G N + + + I+ K V G D Sbjct: 121 VIVPQSGDLNIDGFIARINELTAPAVPRPPNAPENNTPFIIGKAKVIDGTFGYDDPRQPR 180 Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE-GTGNFDNKRSAFKITANFPA--- 212 D+ + D + +S + + A+ Sbjct: 181 DRGARVFDYSHFSLRHLYGELSDFLVQGDTIAFRAKNLKTVDRQTGLEMHDLDTKFLFCQ 240 Query: 213 -KNKAISLKIQLFPLAYP----IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL---- 263 K + L ++ + G L + G + S+ L L Sbjct: 241 KKMELKELDARIGNSHLKNEVIFYYNRSGELGDFNHKIRMKGRLVGSRVDSRDLGLFSSY 300 Query: 264 -ELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 + + +SGNF + +S L Sbjct: 301 IDGLNESWLISGNFNGKVDDFMLSDTDLHFGK 332 >gi|152995966|ref|YP_001340801.1| membrane protein [Marinomonas sp. MWYL1] gi|150836890|gb|ABR70866.1| membrane protein-like protein [Marinomonas sp. MWYL1] Length = 1272 Score = 55.3 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 42/398 (10%), Positives = 115/398 (28%), Gaps = 51/398 (12%) Query: 1 MLRRVLI-----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIA---VKG 52 +LR++++ + F + + L +R E I+G + + G Sbjct: 4 LLRKLILFTFWGAIAFSALLAIFAVSVGQLLPYLDHYRPQIEHNLQQIMGYPVTLEEIGG 63 Query: 53 GIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAE-FLPLLSGEIRVFDMYIDQPH 111 ++ P+V ++ +G + + +R + LL+ + + +P Sbjct: 64 RLE---GVDPTVSISGFKLQ--ANGQSAITVNEMRVRLDTVKSLLTLSPQFTYIRFVRPK 118 Query: 112 LNFYLSSKGVSNWFQRKSTMDMIHNVILEK----------IHVKGGRIKI-IDQESDQVY 160 + S G + ++ + V +E+ + + + DQ + Sbjct: 119 VGLQ-ESDGQWRLNGATPSRNVGNEVGVERVLDYLSAQRNFSIYDAELAVNSDQFGQHLV 177 Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA-FKITANFPAKNKAISL 219 + + + + + S L +D + + + + +++ A+ A +I L Sbjct: 178 RIPHVYIFQKSFESLLTSELYLDDYESPFHLDARIDQTRSLLSNYRVKASIKAPLFSIPL 237 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--RLSGNFK 277 +Y + FG W + + + + + + Sbjct: 238 NDMFPENSYSLSSMEFGGDIWLDALVGKELEVRTEATQLNVAFDDGQKYEVTSSIKLRYS 297 Query: 278 ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEE 337 VR+ + + + N + + + Sbjct: 298 QKHPGVRVDVHDMLIKDKDG---------------------LNYPTTDLSFDWSSVTNRS 336 Query: 338 EKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSG 375 DL + + + E N+ N + +G Sbjct: 337 NISFARADLGLAH-KIAAHFLPEDTNASKILNGLDPNG 373 >gi|108762353|ref|YP_634588.1| hypothetical protein MXAN_6465 [Myxococcus xanthus DK 1622] gi|108466233|gb|ABF91418.1| conserved hypothetical protein [Myxococcus xanthus DK 1622] Length = 1556 Score = 55.3 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 34/336 (10%), Positives = 92/336 (27%), Gaps = 45/336 (13%) Query: 17 LVGAFTV-------PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDI 69 + G + Q + + G + + + V +D+ Sbjct: 16 VAGVLVFATTSRGEAWLVQKGL--ALANEQLSGRLEL-----GRLDLSLS---GVILEDV 65 Query: 70 RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG--------- 120 ++ E + I + +RA L+ + + I++P L +G Sbjct: 66 KLYAPEGEL-VADIARVDVRARLAGLVRQHVNLPSARIERPRLYLAQDERGLNLTRALEP 124 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIID---QESDQVYFLSDLNLQISARFLNII 177 + + S + L ++ ++ G + + ++ L DL+ + SAR+ Sbjct: 125 RTPSPEEPSQGRGSLTLDLHELVLEDGYVDFRQALPEGGERRVRLEDLDARGSARY---- 180 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 + + + T + + + A+ + + + + A +++D G Sbjct: 181 ---AAATQGVGANLDATASLA-RPVPGPVRLALKARGEEGAFEGDVDLEAAGLVLDASGR 236 Query: 238 LFWNEKQP------IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD-GNVRISRYKL 290 + P + + L L + ++ Sbjct: 237 AKLPPETPPGAPEGRLQAGLELRRLSAPPDLLRAFVPTWPLRVPVSAEGSAGLDGDAARV 296 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 +S K + + S + Sbjct: 297 DVTAKAASASLSVKGGMDLERMRTDGLSVKARDVDL 332 >gi|238764601|ref|ZP_04625547.1| hypothetical protein ykris0001_24590 [Yersinia kristensenii ATCC 33638] gi|238697191|gb|EEP89962.1| hypothetical protein ykris0001_24590 [Yersinia kristensenii ATCC 33638] Length = 392 Score = 55.3 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 100/320 (31%), Gaps = 37/320 (11%) Query: 13 FSVVLVGA-FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIR 70 ++++ G +P D+R + I G + V G ++ F P++ +DIR Sbjct: 2 VALLVSGLRMMLPHI---NDYRPQIVAKIQSISGIPLEV-GFMQGTWETFGPTLEMRDIR 57 Query: 71 IDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--QR 127 + +++ +++ + LL + DM Q L+ + N Sbjct: 58 ATLPQAN---WQVQRVTLALDVWQSLLHWRWQFRDMTFYQLQLDLNTTLDRQQNNGNNFE 114 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSIDSIK 186 ST+ I L+ ++ R+ + + + L S +S+ +I Sbjct: 115 ASTLTDIFLRQLDHFDLRNSRVSFLTPSGPRAELEIPQLTWLNSPSRHRAEGQISLSTIN 174 Query: 187 GSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID--LFGNLFWNEK 243 G + + + + ++ +Q + I L N + Sbjct: 175 GQHGVLMVRMDLHDNQGILS----------NGTVYMQADNIDLKPWISRWLHNNTGLDSA 224 Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 + + S+ N+ LS ++ + + + + L+ + D Sbjct: 225 EFSLAAWLSIKSGEIYSGNVLLSQGQANWT--VGSESHQLAVDDFVLEGCRQGNGWQID- 281 Query: 304 KTKVSQDEENLLNFSENGAE 323 LN +G Sbjct: 282 --------APELNLKTDGQS 293 >gi|86158505|ref|YP_465290.1| hypothetical protein Adeh_2083 [Anaeromyxobacter dehalogenans 2CP-C] gi|85775016|gb|ABC81853.1| hypothetical protein Adeh_2083 [Anaeromyxobacter dehalogenans 2CP-C] Length = 385 Score = 54.9 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 90/307 (29%), Gaps = 25/307 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR+ + LG L + + + W + + G + ++I +L Sbjct: 7 RRLAVALGILLVLGIAVRLALDPIATWRTRK-----VLAGLEGMRGTFS-DVEIRLL-SL 59 Query: 63 SVFFKDIRI---DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS- 118 S +RI + ++E + LL G + + + +P +N + Sbjct: 60 SYVIHHLRIEKVGAGGEALPYLEVERAELGVYAKELLHGHLVAG-VELRRPKMNLLVGKA 118 Query: 119 ----KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQISAR 172 + + ++ + +++ VK G + +D + L + + Sbjct: 119 REGTQAAKEAPEAGRGLEALAPFRIDRAEVKDGELLWVDGREPEKPRLWFHGIEATLENF 178 Query: 173 FLNIIS---PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 ++ + + ++ GT + F + L++ Sbjct: 179 ATRAALARREPTVLAARATLQRSGTVSVFATADPLAKQLTFAGQGTVTGLRLAELGELLD 238 Query: 230 IIIDL---FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 DL G L G S G + + L A S L K + + Sbjct: 239 AKTDLVPEKGTLDLYVSFRAEDGRLS-GGVRPLVKDAALKAGASGLGTRLKAMLADASLH 297 Query: 287 RYKLQSI 293 + + Sbjct: 298 LFSDERG 304 >gi|227358299|ref|ZP_03842640.1| membrane protein [Proteus mirabilis ATCC 29906] gi|227161635|gb|EEI46672.1| membrane protein [Proteus mirabilis ATCC 29906] Length = 1267 Score = 54.9 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 36/328 (10%), Positives = 87/328 (26%), Gaps = 27/328 (8%) Query: 2 LRRV-----LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 ++R+ LI L L +V + ++R + E + + + Sbjct: 1 MKRLSKSLLLITLFCLIIFAVVLSGFRYFLPRLDNYRPEIETYLSKQFNSPVTMTQVKGE 60 Query: 57 HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN-- 113 P + + ID S E E + + LL ++ ++ +Q +N Sbjct: 61 WQNFGPDIQITGLYIDNN---SVEVSAEQIIFSFDVWRSLLHFQLYFRELTFEQLAVNYK 117 Query: 114 --FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQIS 170 + G + + I ++ + R + D + +L Sbjct: 118 KPIFTGQNGDITF-TEPDDISSIFLQQFDRFKLVDSRFVFLSPSGDTSTLHIPELMWLNQ 176 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 +++D+ ++ + + + + + Sbjct: 177 KNRHRAQGEVTLDTPIN--------HYGGLKVRLDLYTKKQGALDKGQVFVTADEVDISP 228 Query: 231 IID--LFGNLFWNEKQPIYSGVFSVAG--DFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 + + N E + S ++ L + R G + I Sbjct: 229 WLSQWVKSNSGLGEAKASLSNWIEISNGRITGSQLQIHQGEMDWRNEGRTHVLKVEDLIL 288 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENL 314 R + Q + K + DE Sbjct: 289 RMRRQENGWLADIPYTRKITMDGDEWPD 316 >gi|313205109|ref|YP_004043766.1| hypothetical protein Palpr_2650 [Paludibacter propionicigenes WB4] gi|312444425|gb|ADQ80781.1| protein of unknown function DUF490 [Paludibacter propionicigenes WB4] Length = 1658 Score = 54.9 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 36/289 (12%), Positives = 90/289 (31%), Gaps = 24/289 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 ML+ +L G L + ++ A + + + ++ +K + I Sbjct: 11 MLKVILWMAGVLVLLFVILALIIQIPAVQNKIVHSATSFVSDKTHTRVEIK---NVSISF 67 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN-FYLSSK 119 SV + + ++ + + LL +I + + I+ +LN + ++ Sbjct: 68 PKSVVVEGLYLEDLK-KDTLIYAGKIKANVSLYNLLFSKININSITIENLNLNAYNTNTD 126 Query: 120 GVSNWFQR-------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 V N+ K ++K+++K R++ D S S Sbjct: 127 SVFNYNFLITAFADSTIRQENKPATSSKSTFNIDKVNLKDIRLRYDDAYSGMRVSASLGK 186 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 L++ L+I + + + S I++ Sbjct: 187 LRLKVDKLDIPGAAYGINELLVEKLRVKVGLTQSKKTSTQKSEGILPQIKASG-IRINNS 245 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 ++ + + G + + + F + L + + + LSG+ Sbjct: 246 SFTLEDAVNGQSVYADIR-----QFELKAGSVDLQKELIYSDRISLSGS 289 >gi|260773637|ref|ZP_05882553.1| possible exported protein [Vibrio metschnikovii CIP 69.14] gi|260612776|gb|EEX37979.1| possible exported protein [Vibrio metschnikovii CIP 69.14] Length = 1288 Score = 54.9 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 33/291 (11%), Positives = 90/291 (30%), Gaps = 23/291 (7%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89 F+++ ++ +I + PS+ + ++ + + + + + + Sbjct: 38 NRFKDEIQQWVGEQTQIQITIADVRGFWRNTHPSLALQGVQANLPDGSQIQLETARIDVE 97 Query: 90 AEFLPLLSGE-IRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM------------DMIHN 136 + L V ++ I Q +L+ N + + D + Sbjct: 98 FDLLESFRQRAPVVANLVIHQLNLDVRSVDWLAINQASDEPSSQTGDQGRILQRLDDLFL 157 Query: 137 VILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNII-----SPLSIDSIKGSVI 190 L+ ++ I D + + L+ + R + I+S+K S Sbjct: 158 RQLDDFSIQDSTILYQTMAGDFRQLDVEKLHWKNRGRQHIAEGIISLADSEINSLKVSAH 217 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250 + G+ + F I+A+ ++ + +I + QP G Sbjct: 218 FKDHGSLRDVSGQFYISADKLRVRPWLTRYLADATGIERGLISFNAWITLQHNQP-IDGY 276 Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKI--SDGNVRISRYKLQSILPNSST 299 + + E SG ++ ++ ++S + L+ ++ Sbjct: 277 VELKPSELAWHDTERHELLLE-SGIVQLFPTEDGWQVSAHSLKLRTDDNPW 326 >gi|71082722|ref|YP_265441.1| hypothetical protein SAR11_0013 [Candidatus Pelagibacter ubique HTCC1062] gi|71061835|gb|AAZ20838.1| hypothetical protein SAR11_0013 [Candidatus Pelagibacter ubique HTCC1062] Length = 483 Score = 54.9 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 95/278 (34%), Gaps = 26/278 (9%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF 79 +PL D + + ++ I ILP P +D +I Sbjct: 49 YLLIPLLYDKNWIQNKVVTKLGNEFNINLSNSFDISYRILPKPHYLIRDSKIS------- 101 Query: 80 ESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI 138 ++I+ L++ + + IR+ ++ I++ + + ++ + D + Sbjct: 102 LAEIKTLNVFISQNNFFNKDSIRINEVVIEEANFSLLSNN-------LKPLYKDSENKFS 154 Query: 139 LEKIHVKGGRIKIIDQESD--QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196 +KI + I + D ++ + +S+ L + L + L+ + Sbjct: 155 KKKIKINNSNIFLKDNLNEVISIIKISNAFLFFDEKNLFNLFDLNGEIFNIPFTLNYQNT 214 Query: 197 FDNKRS------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250 +++++ K+ K LK + ++ ++ N ++ K I Sbjct: 215 INSQKNINIKAPDLKLKIIDKFFKKDEDLKSGMNNISI---LNSSINTKYSIKDQIVIFQ 271 Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 + ++ ++ + N KI+ + +IS Sbjct: 272 SDGSRIYNSKIDYNGQLAINPFDLNLKINLYDYKISNL 309 >gi|325273350|ref|ZP_08139616.1| hypothetical protein G1E_09996 [Pseudomonas sp. TJI-51] gi|324101513|gb|EGB99093.1| hypothetical protein G1E_09996 [Pseudomonas sp. TJI-51] Length = 160 Score = 54.5 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 58/139 (41%), Gaps = 8/139 (5%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60 R +G+ L +V++ ++ + ++R D + +A +G + V G ++ Sbjct: 13 RWGLGICALLAVLVALYVSLGRALIPLVAEYRADVQSKAEQALGMPVHV-GALEGRWSGL 71 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + +D+++ + G+ +++ + + + LL+ E+R+ + + L + + Sbjct: 72 APVLRVRDLQLGE---GAKALRLDEVMVVPDVWASLLAREVRLSRIQLGGLQLIVRENGQ 128 Query: 120 GVSNWFQRKSTMDMIHNVI 138 G N D N Sbjct: 129 GAWNLEGLPQQDDTPLNPA 147 >gi|288802928|ref|ZP_06408365.1| conserved hypothetical protein [Prevotella melaninogenica D18] gi|288334745|gb|EFC73183.1| conserved hypothetical protein [Prevotella melaninogenica D18] Length = 1490 Score = 54.5 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 47/369 (12%), Positives = 109/369 (29%), Gaps = 34/369 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATL----IVGKKIAVKGGIKIH 57 ++++ + ++ + T + + + ++ +G ++ V G I + Sbjct: 1 MKKLRTIIRWVIWTIAGLYITTIVLLHIPAVQGFLAQKVGDVAGNKLGTEVHV-GRIDLG 59 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYL 116 + DI I + + R + LL GEI + + Y Sbjct: 60 FI--NRFVLDDILIYD-QSHKKMLSASRVGARVDIWHLLRTGEINISSAQLFGLRAELYK 116 Query: 117 -SSKGVSNW-------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 S N+ + +T ++ + + ++ G IK ++ +LN Sbjct: 117 TSKDAKPNFQFVLDSLASKDTTSHTPLHLSINSLVIRHGSIKYDCLDAPTTPNRLNLNHI 176 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 + + + +D + AFK + K A LK Sbjct: 177 NVSDISSYLILNKLDDTSVWADL--------RALAFKEASGLEVKQLAFELKANQQQATL 228 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 I G + +++ + L + K K SD + Sbjct: 229 RDFI-FDGTNSKIALKELFT-TYKFNNKNLDFNTLRYTIK--DFKAAIKPSDFAPILP-- 282 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 L+ + N ++ D + LN S+ + + + +K+ + Sbjct: 283 DLKPLTTNYTSTVDVEGTSQSVLVKHLNVSDQTLSTQI---KAKGWVRNIQKSPIWNFTF 339 Query: 349 DDIQYSVNK 357 ++ S N Sbjct: 340 SPLKVSKNT 348 >gi|118580229|ref|YP_901479.1| hypothetical protein Ppro_1809 [Pelobacter propionicus DSM 2379] gi|118502939|gb|ABK99421.1| conserved hypothetical protein [Pelobacter propionicus DSM 2379] Length = 1189 Score = 54.5 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 36/330 (10%), Positives = 97/330 (29%), Gaps = 30/330 (9%) Query: 15 VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAV-----KGGIKIHILPFPSVFFKDI 69 + V + ++++ + T + + + V G + + + Sbjct: 28 LAAVAVLALKIYLNSSHAPRLLSAILTDYLHQTVRVATLRTDGDV---------LSLTAV 78 Query: 70 RIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127 + D ++E +++ ++ LL G + + + ++ +S GV N+ + Sbjct: 79 TLANPPDAPPGNLCRVERITVAPDWGELLRGRRSLRLLSLSGLRVDLRRNSTGVWNFSRL 138 Query: 128 KS----TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + +++ + V+ G + I Q + L I Sbjct: 139 QRLLGTRKPSGAELLVRRFVVRDGALTIDGQGVRGLNLLLTELTTKGTSDARIQLSFQDP 198 Query: 184 SIKGSVIAEGTGNFDNKR---SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 G N+ A PA + ++ L L N+ Sbjct: 199 GR-NRYTLIGKLRPGNEPELDLNLSAPAISPAALAGM-FAVKDASLLKKTRAALRMNVLM 256 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI-SDGNVRISRYKLQSILPNSST 299 + + G V L+ + + L+G + + + + +L+S+ + Sbjct: 257 HAGRLRLRGSLDVRQLPLALVTKQHPTIRP-LNGKLEFIASYDTTQDQARLKSLTLTLND 315 Query: 300 DEDNKTKVSQDEEN---LLNFSENGAESMH 326 + + +E + + A Sbjct: 316 RLVARASATMEEVRSAQRFSVDLDIARLDL 345 >gi|86158476|ref|YP_465261.1| AsmA [Anaeromyxobacter dehalogenans 2CP-C] gi|85774987|gb|ABC81824.1| AsmA [Anaeromyxobacter dehalogenans 2CP-C] Length = 878 Score = 54.5 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 35/318 (11%), Positives = 84/318 (26%), Gaps = 41/318 (12%) Query: 37 ERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL 96 + +G+ + V+ + + + + +E + L L Sbjct: 43 ADTLSQRLGRPVTVERVKTRLLGGVGVRVGGVSVGPGEGEDRPLATLERAEVEVNLLGAL 102 Query: 97 S---GEIRVFDMYIDQPHLNFYLSSKGVSNW-------------------FQRKSTMDMI 134 + V + +D +N G++N + + + Sbjct: 103 LSGGKRVTVREAVVDGLRVNVVRFPDGITNLERVAKRLEETAAKEPPAQAPEGEPKPADL 162 Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 V +++ V+ RI +D+ L +L + R L PL + + Sbjct: 163 SAVRVDRAAVENARIAFLDRSVKGAEELYVDDLDVEVRDLRAGRPLEVVLKAAVLAKAQN 222 Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI----------IIDLFGNLFWNEKQ 244 K + T + + ++ P + Sbjct: 223 LELRVKAAPLPPTLVPTPEQLTLKVQPIDLGPLAPFVPGEAGFRGGRFQADLAVALGAAV 282 Query: 245 PIYSGVFSVA-GDFSKLLNLELSAKKSRLSGNFKIS------DGNVRISRYKLQSILPNS 297 P SG +V G + L +L + G++RI + +L + Sbjct: 283 PGGSGRTTVKGGFRADQLAFAGQEGGKKLDASLDADLDADAEKGDLRIGKLELTAGPV-- 340 Query: 298 STDEDNKTKVSQDEENLL 315 + + + + Sbjct: 341 ALTGHGAATGLRGDAPRV 358 >gi|332186785|ref|ZP_08388527.1| hypothetical protein SUS17_1945 [Sphingomonas sp. S17] gi|332013118|gb|EGI55181.1| hypothetical protein SUS17_1945 [Sphingomonas sp. S17] Length = 1411 Score = 54.1 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 84/255 (32%), Gaps = 16/255 (6%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQA---TLIVGKKIAVKGGIKIHIL 59 +RVL +GF +++ + L I+ R Q T G I V G I+ + Sbjct: 26 QRVLKWIGFTILGLILLVGAILLGINTDPGRRFVADQLGGYTTASGLNIKV-GRIEGSLY 84 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 S+ D+R+ + L++ + I V + D + + Sbjct: 85 GRMSLV--DLRVSDPKG--VFLSSPRLNVDWRPFAYTNNHIDVRSLSAD--LVTLARKPE 138 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 + + ++ + ++ +K R I + Q + L+ ++ ++ Sbjct: 139 LKPTPSDPNAPLLPDLDIDVNRLTLK--RFVIGAPVTGQRHVLA-IDGKVHIADRRAQVT 195 Query: 180 LSIDSIKGSVIAEG---TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 S D+++G IA G D A ++ + + + L P+ + + G Sbjct: 196 ASADALRGPGIAGGDRLRLMLDAVPDADRLAVDVKLTAPTGGVVASMAGLKAPLTLAVDG 255 Query: 237 NLFWNEKQPIYSGVF 251 W Sbjct: 256 RGGWKAWNGRAIATL 270 >gi|94501794|ref|ZP_01308307.1| hypothetical protein RED65_07659 [Oceanobacter sp. RED65] gi|94426102|gb|EAT11097.1| hypothetical protein RED65_07659 [Oceanobacter sp. RED65] Length = 1277 Score = 54.1 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 39/385 (10%), Positives = 115/385 (29%), Gaps = 26/385 (6%) Query: 6 LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAV---KGGIKIHILPFP 62 L + + L A +F +R++ E+ + + ++ + G + + + P Sbjct: 15 LFLVAAFLLMALYSAIGQQVFPYIGQYRQNLEQFLSEQLNSQVDIRSLSGDMNVLV---P 71 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEF-LPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ + I I K I + L L++ + + + +L+ Sbjct: 72 SIQMEGITIAGKSARQANLSIASIDAVLNPRLSLINLKPVFDRVRLSGLYLSLGDGEPTD 131 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 S + + ++ + + + + D + ++ + + F +++ Sbjct: 132 SQNNPVGLKSLIQNLLLQQYLELNNVTVDFGDGRTVELDHV----VMTGDGFHRLMTGSV 187 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFK---ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 + + S+ A + N N ++ ++ ++ Sbjct: 188 VYGEEKSIRASLQLYSEGDPWDLSQFYARGNLDVANADVAYWLK-NLFDLSTFESFSPSM 246 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR-----ISRYKLQSI 293 + ++ S + ++ A ++ F + ++ + K Sbjct: 247 NLGFEFKEGLLNYAKFNVSSPRVEMQDYANLKAVNTQFWVKQLSLNSWSIWFDKAKFNLK 306 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353 + + ++N + E + N + E + D D ++ Sbjct: 307 QEPWQFENFGLNLSRKGQDNRWQYYIQDIELSYLEN---LLYDLELMPETLDETLDSLRP 363 Query: 354 SVNKKEEKDNSH---DKENQENFSG 375 N ++ + KE Q NF Sbjct: 364 QGNLRDANLIVNQSPSKETQYNFVA 388 >gi|261209927|ref|ZP_05924227.1| possible exported protein [Vibrio sp. RC341] gi|260840992|gb|EEX67524.1| possible exported protein [Vibrio sp. RC341] Length = 1280 Score = 54.1 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 37/341 (10%), Positives = 100/341 (29%), Gaps = 25/341 (7%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 +L+ L + ++ + G + + F+ + + ++A+ PS Sbjct: 2 WLLVSLLIVLALAVTGLRILLPQM--NRFQAEIQDWLNQNSSVQVAIADVQGYWRNTHPS 59 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN--------F 114 + + ++ + + + + + L L + + D+ ++ L+ Sbjct: 60 LSLQTLQAHWPDSNDIQLNAASIEIEFDLLQSLWQRQPVIADLTVNGMVLDLRVIDWLAL 119 Query: 115 YLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172 + + R +D + L+ +K I D + + L Q Sbjct: 120 EQNPNPRQSRQGRVVKQLDDLLLRQLDDFSLKNSAILYRTFAGDLRQLDIDKLRWQNRGP 179 Query: 173 FLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 +SI S G+ + F ++A+ ++ ++ Sbjct: 180 RHFTEGVVSIAGTNINSLLVSANFTDHGSLRDVSGDFYVSADKVRVLPWLTRYLKDQTGI 239 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285 + G QP+ G + N E + SG K + ++ Sbjct: 240 QKGQLSFNGWATLEHNQPV-DGYVELKPSELVWQNAEQRHELLLESGIVELKPTKLGWQV 298 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENL-LNFSENGAESM 325 + + L+ ++ V+ D + + + Sbjct: 299 NAHSLRLRSDDALWPL---MDVAMDWQPDQWRLNLSQLNIE 336 >gi|269793313|ref|YP_003318217.1| hypothetical protein Taci_1721 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100948|gb|ACZ19935.1| hypothetical protein Taci_1721 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 1174 Score = 54.1 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 46/364 (12%), Positives = 101/364 (27%), Gaps = 44/364 (12%) Query: 2 LR--RVLIGLGFLFSVVLVGAF-TVPLFIDWTDF----REDFERQATLIVGKKIAVKGGI 54 +R R+L L LF+V+ +GA + + R+ +G ++ + Sbjct: 1 MRGARLLALLVGLFAVIALGAVPLASALRNSDLYASRVRDALVEGVQSSLGCELELG--- 57 Query: 55 KIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 + P + IR+ G + E S+ L+ GE R+ + + + + Sbjct: 58 DVSGNPIRGYEMRGIRLSTPSGGV-VLEAEEGSLHLSIPDLMRGEPRLSVVRLGRGRGDL 116 Query: 115 YLSSKGVSNWFQRKSTMDMIHNVIL-------EKIHVKGGRIKIIDQE---------SDQ 158 L + +++ V E + V R+++ + S Sbjct: 117 DLMRSLMPRGPRKERPPFDEVRVRDLVLTSSGESLSVNSARVRLPEGGYLFALSGGLSGL 176 Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218 L + + L+ G + G R + Sbjct: 177 EVNLKGEVHRAPSGGGAWRLDLAASLGDGKISISG---VAGDRIDLAGRVTSLWIDDLRR 233 Query: 219 LKIQL-----FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS 273 ++ L P + NL + + G +V +E + Sbjct: 234 VRPFLPASVSLPKGIQGRVTASFNLRGSGEALAGEGEGNVRDLLVAGYLVEEAKGAWSTD 293 Query: 274 GN---FKISDGNVRISRYK------LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324 G F+++ G V + L++ + + + G Sbjct: 294 GRAVTFRVTAGRVNGAAVSGVVLVPLRTGGVSLDLKLEGVSADRWRGNLPWLEDIQGDRI 353 Query: 325 MHDL 328 D+ Sbjct: 354 SADV 357 >gi|88799730|ref|ZP_01115304.1| hypothetical protein MED297_14155 [Reinekea sp. MED297] gi|88777464|gb|EAR08665.1| hypothetical protein MED297_14155 [Reinekea sp. MED297] Length = 1291 Score = 53.7 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 24/295 (8%), Positives = 85/295 (28%), Gaps = 25/295 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK---IH 57 R L+ + + +VL + + + E + +G + + G + + Sbjct: 14 RNALLKVAAFWVLVLAAYLALGRQFFPYIDRIQPEIEVWLSGQLGTPVTI-GELHGEWVR 72 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL 116 P V D+ + ++ +++ + G + + Sbjct: 73 FNPV--VHLSDVTLGDD------IRVAQMTLAPGIYESISRGGLSFIRFELTDFQAELIE 124 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 + +G + + + L + + + ++ + L L + Sbjct: 125 TREG-WSLQGLSGSGGRVELSELLALLQRQQEVNFVN----TRLAVRPLEL-PRFELILH 178 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA-KNKAISLKIQLFPLAYPIIIDLF 235 L+ + ++A + + ++ +N L ++ + + Sbjct: 179 DGQLAGYGSENFLVARASIRANQIDVPIELQLETSQIQNTKNRLYLRHGTIDLSPWLQ-- 236 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 + + +G + + D S+ +L + L+ + + ++ Sbjct: 237 -EVADGIGRAEMAGEYWLNLDGSQWRDLTVRLTTESLTYAGTYDVIELNGAHFEG 290 >gi|226943398|ref|YP_002798471.1| hypothetical protein Avin_12700 [Azotobacter vinelandii DJ] gi|226718325|gb|ACO77496.1| conserved hypothetical protein [Azotobacter vinelandii DJ] Length = 1277 Score = 53.7 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 91/304 (29%), Gaps = 28/304 (9%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKG-GIKIHILPFPSVFFKDIRIDQKEDGSFE 80 PL D R + + + ++ +A++ + L P + +D+ I + ED Sbjct: 36 LAPLVADT---RLEVQARVRDVLDMPVAIRALEGRWTAL-SPRLLARDVTIGEGED---A 88 Query: 81 SKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV-- 137 +E + +R + L LL+ E+RV + ++ + G Sbjct: 89 LHLERVQVRLDLLRTLLARELRVAALEVEGVSFTLAQDAGGRWTLEGAPQRGRQRPFNPD 148 Query: 138 -------ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG-SV 189 ++ + + ++ + + L +++L + + + G + Sbjct: 149 ESLRALERIDHLSLLDSQVTFA-PHGQEPFSLQNVDLTLRSDGWRQRLDGRLILPDGQPL 207 Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 G ++ + +SL + P + + + Sbjct: 208 QLSLHGQLADEGWRQS------SAELYVSLPQSDWASWVPRSLTGDWRIERLRAGGEFWL 261 Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + + L+ + + +G ++ +S + L + + + Sbjct: 262 AWDKSRLQRAAARLQAPELRIQRTGQAPAEVRDLALSGHFLSDGE--NLRALIDSLQADF 319 Query: 310 DEEN 313 E Sbjct: 320 GESR 323 >gi|302877877|ref|YP_003846441.1| adenylyl cyclase class-3/4/guanylyl cyclase [Gallionella capsiferriformans ES-2] gi|302580666|gb|ADL54677.1| adenylyl cyclase class-3/4/guanylyl cyclase [Gallionella capsiferriformans ES-2] Length = 1290 Score = 53.7 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 31/308 (10%), Positives = 91/308 (29%), Gaps = 32/308 (10%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF 79 F +P + + + E+ + + + + + G + ILP P + ++ I + Sbjct: 915 LFALPAVMPMQSYLANIEQTLSAKLQQPVHI-GRLSARILPAPRLILSEVSI----GATR 969 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVIL 139 + + + + + L + + ++ + + + + + Sbjct: 970 QIQADQAQVNFAYSALFGATRAIDSLNLEG----VRVKDEALLQVAGWLQQTASDAHYPV 1025 Query: 140 EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN 199 +I R++ LS + ++ + +++ ++ E Sbjct: 1026 ARIGFTQARLE------SDSVPLSGVGGEVDFDASGHFTEAKLNADGHKLVLELHA---G 1076 Query: 200 KRSAFKIT-----ANFPAKNKAISLKIQLFPLAYPIIID-----LFGNLFWNEKQPIYSG 249 + F +T LK + I + G + + + + Sbjct: 1077 PKLPFSLTLRDRALPLFPDWIFEDLKANGELSQDEMRISDLDGRIRGGVLTGDARINWRE 1136 Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 + V G + + L L G+ DG R + + + V++ Sbjct: 1137 GWRVQGA-LEAKVIPLQNINKLLGGDL---DGTARFQMQSGRLAKLADTAVLNGVFNVNK 1192 Query: 310 DEENLLNF 317 N ++ Sbjct: 1193 GIVNGVDV 1200 >gi|327481155|gb|AEA84465.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 356 Score = 53.7 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 31/293 (10%), Positives = 79/293 (26%), Gaps = 20/293 (6%) Query: 53 GIKIHILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110 + + + + + I++K+ + K + + + +L V ++ QP Sbjct: 49 DVDLVWWRG-AYRVEGLLIEKKDKRVQAPLFKAPSIDIAISWDAILRHREIVGEVVFKQP 107 Query: 111 HLNFYLSSKGVSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 HLNF + + + L +I V G++ + SD + + Sbjct: 108 HLNFVDGGDSGDSQSGEGVDWRDQLDALVPITLNEIRVVDGQLSFRNFSSDPQVHVYASD 167 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 +Q S L + + + + G F+ + + + ++ + Sbjct: 168 IQASLYNL-TNTDDADGTRTATFEGTGKL-FNQAPIEATARFDPFTDWEDFEVNLRATGV 225 Query: 227 AYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 + DL G + + K L Sbjct: 226 PLKQLNDLSRAYGKFDFAGGTGDLVVEVEASNSQL------DGYIKPLLRNVDIFDYEQD 279 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLL--NFSENGAESMHDLNETDFF 334 + K + + + ++ +G D++ F Sbjct: 280 VANEDKGFFRGLWEAVVGGGQEVLKNQRKDQFATRVELSGTTKETDVSPFQAF 332 >gi|91786026|ref|YP_546978.1| hypothetical protein Bpro_0115 [Polaromonas sp. JS666] gi|91695251|gb|ABE42080.1| hypothetical protein Bpro_0115 [Polaromonas sp. JS666] Length = 435 Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 96/299 (32%), Gaps = 26/299 (8%) Query: 21 FTVPLFIDWTD-FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF 79 + + D Q +G K+ V G + +LP P++ ++I Q + Sbjct: 23 VAMMRLVPSDDELARRAALQLEAWLGVKVNV-GALHWRLLPAPTLVMENIITVQPQP--- 78 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-------NFYLSSKGVSNWFQRKSTMD 132 I+ L+ + L L +++ + + + G + T Sbjct: 79 -IVIQKLTAYPDLLALWQRRVKMDRVDLHGATVPQLSLGWALARPEHGR------EPTES 131 Query: 133 MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE 192 + ++ L ++ + + I + V + +++ R + + + + Sbjct: 132 SVGDIPLARLVFRD--VTWISRHGVPVIYDGEVDFDPGWRPRHALLRRPGFTPVTDLTLT 189 Query: 193 GTGNFDNKRSAFKITANFPAKNKAIS----LKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248 G D + + + + L P +++ L ++ I + Sbjct: 190 REGQDDRWAARINVGGGTAHGTVELQTRPNGRFHLEGALQPKDMEVESALAAFNRRSIVA 249 Query: 249 GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 G S S + + + L + G+ ++ R+ L + ++ + +T + Sbjct: 250 GKASGNTVLSAHGDNVVELAQ-SLHTRTTFAMGSSKLLRFDLDKAIRSAGQEFAGQTAL 307 >gi|302346552|ref|YP_003814850.1| hypothetical protein HMPREF0659_A6809 [Prevotella melaninogenica ATCC 25845] gi|302150416|gb|ADK96677.1| conserved hypothetical protein [Prevotella melaninogenica ATCC 25845] Length = 1708 Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 40/381 (10%), Positives = 98/381 (25%), Gaps = 43/381 (11%) Query: 2 LRRVLIGLGFLFS--VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIH 57 + R L L + + V+L L+ + + G ++++ +++ Sbjct: 1 MNRSLKWLVAIVATPVILFLILVALLYCPPVQNWAVKHVAAYVSDKTGMEVSID---RVN 57 Query: 58 ILPFPSVFFKDIRIDQKEDGSF-----ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112 + +++ + D + + L + LPLL + V ++ + Sbjct: 58 LSFPLDFQLDGLKMLRPNDSIPNKKDTVADVHRLVANVDLLPLLKSRVEVNELTFTKLKA 117 Query: 113 N-------FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI-------IDQESDQ 158 N + + + +V + K ++GG + I D + Sbjct: 118 NTVNFIGDLRIRGDLQRLHIVSHAVNLVGDSVRVNKADIEGGWVDIALGDTVPEDPNKQK 177 Query: 159 ---VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215 + +NL + L++ ++ A G AN + Sbjct: 178 PLWRINIDKINLTKTDFRLHMPGD-TMSVRANFKKAVANGAELLLHDNIYKVANVDWQGG 236 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY------SGVFSVAGDFSKLLNLELSAKK 269 S A + V K + Sbjct: 237 DFSYNQNYVRHAKTGFDAAHIAMQDVNLGIDSFLYAAPKIRLRVRTANMKE---KSGLIV 293 Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 G F + ++ + + +T+ + + + N + + L Sbjct: 294 KDFRGPFSMDSTSINLRDLYFRLP----NTELSGRFMMDMNAFADKNPGQISTQLDGFLR 349 Query: 330 ETDFFEEEEKKNKNDDLKKDD 350 D KN + Sbjct: 350 LEDLHPFLTSIPKNIYQAIPN 370 >gi|271498847|ref|YP_003331872.1| hypothetical protein Dd586_0270 [Dickeya dadantii Ech586] gi|270342402|gb|ACZ75167.1| conserved hypothetical protein [Dickeya dadantii Ech586] Length = 1284 Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 30/314 (9%), Positives = 79/314 (25%), Gaps = 43/314 (13%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFE 80 +P FR A G + V + F P++ ++RI + Sbjct: 35 VLPTL---DTFRPQIVAWAQSATGLPMEVD-SLSGSWETFGPTLDITNLRIHHPDAE--- 87 Query: 81 SKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNF--YLSSKGVSNWFQRKSTMDMIHNV 137 + E +S+ + L + + D+ L+ + + + + Sbjct: 88 WQSERISVALDVWQSLLHLKWKFRDLTFYHLQLDLKTPIDPERQRTRSWEPDQLGSLFLR 147 Query: 138 ILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196 + ++ RI+ + Q + L +S+ S Sbjct: 148 QFDHFDLRNSRIRFLTPSGTQAELQIPQLTWLNGKNRHRAEGQISLSS------------ 195 Query: 197 FDNKRSAFKITANFPAKNKAIS---LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253 F+ + ++ + + ++ + +Q + + G + Sbjct: 196 FNGQHGVVQVRMDLRDEQGWLNNGVVYLQADNIDMKPWL----------------GRWIR 239 Query: 254 AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313 + + L+A G+ D + + + +N Sbjct: 240 SNTGLENARFSLAAWLQVREGDIYGGDLLLNQGDASWRDGDTLHQLGVNGLALHVNRYQN 299 Query: 314 LLNFSENGAESMHD 327 D Sbjct: 300 GWQLDVPSLNLSTD 313 >gi|297568793|ref|YP_003690137.1| hypothetical protein DaAHT2_0814 [Desulfurivibrio alkaliphilus AHT2] gi|296924708|gb|ADH85518.1| hypothetical protein DaAHT2_0814 [Desulfurivibrio alkaliphilus AHT2] Length = 1266 Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 38/343 (11%), Positives = 98/343 (28%), Gaps = 29/343 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M R++ + + + + + A +PL + R D + + +I++ I++ LP Sbjct: 1 MARKIRLIVLGVLLLAALSALVLPLILRSETVRSDLADRLGYHLRSEISLD-SIELAWLP 59 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS-- 118 P + + + + + E + + F+ LL + + ++ P L L + Sbjct: 60 TPHLLVRGVDVQRPELS---LIMPETHVYPSFIALLQMRLEPRRVVLNDPELQLDLQARL 116 Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 G V + + ++ ++ + D+ I Sbjct: 117 AGTEVASPAVFPRKFKGEVEISRGNLSLTSTELPGNLRLEALEFRDIEAAIKLSPTRFDL 176 Query: 179 PLSID-------SIKGSVIAEGTGNFD--NKRSAFKITANFPAKNKAISLKIQLFPL--- 226 LS+ ++ G+ + +G ++ P L+ Sbjct: 177 ELSLRPSFGRHLALSGTYLVDGNYQLQTHGRQLHLHELITTPLL-GVAPLETAADLQLQA 235 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 + L L N + + + L L+ + + + I+ Sbjct: 236 TGKGLAKLDAALTGNLPCFLLKPQ----DIAPQAGAVRLDCGAIDLALHQREDFWQLTIN 291 Query: 287 RYKLQSILPNSSTDEDNKTKVSQD--EENLLNFSENGAESMHD 327 +++ + +G E D Sbjct: 292 DFEVSQPQ----FRLGGVITRDSRATDSPHWEVDLHGRELNAD 330 >gi|258623374|ref|ZP_05718378.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258584340|gb|EEW09085.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 1292 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59 L R+L+ L +VL A T + F+ + + ++A+ Sbjct: 8 LGRILMWLLVSLLIVLALAVTGLRILLPQMNRFQAEIQHWLNQNSSVQVAIADVKGYWRN 67 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113 PS+ + ++ + + + + + L L + + D+ I+ L+ Sbjct: 68 THPSLSLQALQAHWPDSNDIQLNAASIEIEFDLLQSLWERQPVIADLTINGMVLDLRAID 127 Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168 + + R +D + L+ +K I D + + L Q Sbjct: 128 WLALEQNPNPRQSRQGRVVQQLDDLLLRQLDDFTLKNSAILYRTFVGDMRQLDIEKLRWQ 187 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 S + +SI S G+ + F ++A+ ++ ++ Sbjct: 188 NSGQRHFTEGVVSIAGTNINSLLVSANFRDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281 + QP G + N E + + SG K + Sbjct: 248 QTGIQKGQLSFNAWATLEHNQP-IDGYVELKPSELVWQNGEQNHELLLESGIVELKPTKQ 306 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 +++ + L+ + + + N + + Sbjct: 307 GWQVNAHSLR-LRSDDVLWPLLDVAMDWQP-NEWRLNLSQLNID 348 >gi|154175119|ref|YP_001407535.1| transcription termination factor [Campylobacter curvus 525.92] gi|112803852|gb|EAU01196.1| transcription termination factor [Campylobacter curvus 525.92] Length = 1081 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 42/371 (11%), Positives = 109/371 (29%), Gaps = 36/371 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 +++ I + + +L+ + + + + +++ ++ P+ Sbjct: 5 KKIAIITSCVVAALLLIYTLFGFYGVPYILKNVVPNKLKE-MNVSLSLN---EVKFNPY- 59 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + ++ + S E + ++ + + I V + +++P + Sbjct: 60 TFEL-NVTKPELNTTSPLFSGEQIDVKLKPFLIFKKLIAVDILRLEKPDIRISRDKNASL 118 Query: 123 NWFQRKSTMDMIH------NVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQISARFL 174 N S + N L + G D+ + + +D+N +IS Sbjct: 119 NLAPFLSDSNNTSEEKSSLNFALNTAKIVKGSFGYSDENLTHPFNVKFNDINYEISGINT 178 Query: 175 -----NIISPLSIDSIKGSVIAEGTGNFDNKR---------SAFKITANFPAKNKAISLK 220 S S S+ + +G + R + K A ++++ +K Sbjct: 179 ELNSIGKHSFDSNSSLAQKIDWQGGVDISPLRIYGVLKINEFSIKPVAISFIDDQSLQIK 238 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS-AKKSRLSGNFKIS 279 + + N + + + + N++ S + + IS Sbjct: 239 NMIIDTKLDYELAADKNATSIKLKDSF-LTLKALEAVLENQNMKFSELSIPNIVFDATIS 297 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339 D + L +I + E VS + + LN S + D N + Sbjct: 298 DKRDL--KLNLDTIALKEPSFEGG---VSLNTK-ELNLSGLALHANIDENSSLSLNTALN 351 Query: 340 KNKNDDLKKDD 350 + Sbjct: 352 SAYISAVSLGQ 362 >gi|83311967|ref|YP_422231.1| hypothetical protein amb2868 [Magnetospirillum magneticum AMB-1] gi|82946808|dbj|BAE51672.1| hypothetical protein [Magnetospirillum magneticum AMB-1] Length = 252 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 28/223 (12%), Positives = 74/223 (33%), Gaps = 7/223 (3%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R++LIG G L +VV+ A + +D ++ E + + G K++V G +KI + Sbjct: 1 MRKLLIGAGVLVTVVIGAAVFLLSSLDT-IVKKVIEDVGSQVTGVKVSV-GAVKISLSEG 58 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + + ++ +++ + L + V D+ + P + + ++S Sbjct: 59 KG-SISGLTVANPPGFSSDPAIRLGEIALALDTGSLNKNPVVVKDITVASPFVAYEMASG 117 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 G + + + D++ ++ + L + L Sbjct: 118 GSN--IDVIQKNVKAFTAKQAGAKAEPAKPASKDKDEEKKLVIERLAITGGQVKLAAGGI 175 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 + T + A + ++ ++ Sbjct: 176 PGAEGTAKLADIVLTNIGKDSGGASSAQVAQKVMDSLVNGALK 218 >gi|31789469|gb|AAP58582.1| hypothetical protein [uncultured Acidobacteria bacterium] Length = 500 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 87/317 (27%), Gaps = 23/317 (7%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE 84 R+ E+QA+ +G+ + + ++ ILP P + D+++ + Sbjct: 26 WLFAGDGVRQALEQQASTWLGQPVQIA-SARVAILPRPGLRLSDVKVGGAAS----LSLS 80 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV 144 + + + LL I + I L + T Sbjct: 81 AIDIATDLGALLRRRIENARIEISSSRLELPI----------ALPTSGGGGAPTASGDAT 130 Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204 +I+ S L D+ L R + + + +D + V T Sbjct: 131 SDASASVIEVASISEIALRDVTLASHGREITVSASAGLDGNRLIVR-RFTATSGLTTLDA 189 Query: 205 KITAN-FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL 263 + P + + + + + + + + + VA S Sbjct: 190 LGEVDLAPRVDARLKVAANRLDVDELLALAAAFSPAAAARPAASTPPPRVAARVSAESAT 249 Query: 264 ELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 + + + +F+++ V +S Q + L+ S Sbjct: 250 AGGVEIRQFATDFELNGDAVALSPLTFQLFGG----RYQGSMNATMG--RTLSASIRSRI 303 Query: 324 SMHDLNETDFFEEEEKK 340 D+ + F E Sbjct: 304 MDLDVAQLAAFGGAEGT 320 >gi|85713046|ref|ZP_01044083.1| Uncharacterized conserved membrane protein [Idiomarina baltica OS145] gi|85693149|gb|EAQ31110.1| Uncharacterized conserved membrane protein [Idiomarina baltica OS145] Length = 1290 Score = 53.4 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 94/271 (34%), Gaps = 15/271 (5%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFE 80 +P F D T ERQ + +G+++ + + + P++ + ++ + + Sbjct: 35 GLPYFPDLTK---PLERQVSASLGQQVHINQ-LALSWRQQGPAIELSNFKLGDTDHDALS 90 Query: 81 SKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHL--NFYLSSKGVSNWFQRKSTMDMIHNV 137 + L + +F + + + ++Q + + ++G S + ++ + Sbjct: 91 VDVGRLWVVIDFWESVAERQWVLQQFILEQADIQLDLRRLTQGESE-SVKLDQVEQLFLN 149 Query: 138 ILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196 LE + + + + + + L+ + + + Sbjct: 150 QLESFSFQQSSLHVTPLSGNSRTIDIERLSWSNRGSIHQGVGQFRVKNF-TPNRLNFVLQ 208 Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGD 256 + +R + F ++ I + L I I N+ + I+ G V+ Sbjct: 209 LEGRRWR-DMVGQFYVDSRGIDVSPWLEKQIPGIDIT-DSNVNFTVWLDIFQGQ--VSKA 264 Query: 257 FSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 ++L+ L+ ++ + I G V++ R Sbjct: 265 LMRILDNRLTMQRDNRVVDLHIPSGEVQMER 295 >gi|87120468|ref|ZP_01076362.1| hypothetical protein MED121_21962 [Marinomonas sp. MED121] gi|86164111|gb|EAQ65382.1| hypothetical protein MED121_21962 [Marinomonas sp. MED121] Length = 1263 Score = 53.4 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 34/274 (12%), Positives = 84/274 (30%), Gaps = 10/274 (3%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI- 58 + ++ L F ++L + +R+ E + + G + + I + Sbjct: 1 MTDIIWWLAVSFVLILASLIVSVKLLLPHVDKYRQQIEINLSHLSGYNVKID-NISAKLE 59 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNFYLS 117 PS+ + + ++ E+ E L +R F + E + + + Sbjct: 60 GLDPSIAIRGLSLEAAENSEP-VAFERLMIRFNFWESVRQFEPKFSYIRFYNTKIGLSEV 118 Query: 118 SKGVSNWFQRKSTMDMIHNV-ILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLN 175 S + + +I ++D D + ++L + +L Sbjct: 119 GGNWSLTGIESGGGGSADGFTRILNYFLDQRQISLLDTRLDIDSERVGKVSLSSDSMYLK 178 Query: 176 IISP-LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 S + I + G + F+ + N +SL ++ + + Sbjct: 179 RTSSGIGITANVGHQNYDDEFRFNAEIKGDLKKLNNLNLEAQLSLP-EMVIMPSQLKALK 237 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268 L +S DFS + ++++S Sbjct: 238 EYKLSKLALGTNLWLSYSPEKDFSLVGDIKVSPM 271 >gi|146306820|ref|YP_001187285.1| hypothetical protein Pmen_1789 [Pseudomonas mendocina ymp] gi|145575021|gb|ABP84553.1| hypothetical protein Pmen_1789 [Pseudomonas mendocina ymp] Length = 364 Score = 53.4 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 38/335 (11%), Positives = 93/335 (27%), Gaps = 22/335 (6%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMR 89 R+ + + + + I + + + I + + + Sbjct: 34 IRDYLNDKLADMGDYQGQIS-DIDLAWWRG-AYRINGLSIVKVTGDVPVPLLDAPLIDIS 91 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH--------NVILEK 141 + PL V ++Y ++P LNF G N ++ + L + Sbjct: 92 VSWPPLWRERAVVAEVYFERPQLNFV---DGGENEQADQTGAGTDWRDQLNKLLPITLNE 148 Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG-NFDNK 200 + V GRI + + LS + S L + D + EG ++ Sbjct: 149 LRVIDGRITFHNFTTSPKVELSADEVNASLYNLTNVGDEPGDRVAH---FEGRALLLEHA 205 Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDF 257 + T + + + L+++ + D G + S Sbjct: 206 PLEAEATFDPFEQFEDFELRLRARDIDLTRFNDFARAYGRFDFKRGSGDLVIEASADDAQ 265 Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317 L + + D + + R ++++ T N+ + L+ Sbjct: 266 LSGYIKPLLREVEVFDWEQDVEDEDKGVLRSLWEALVGGGETLLKNQRRDQFATRVELSG 325 Query: 318 SENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 + + E + + + ++ Q Sbjct: 326 NVHDQEVSAFQAFLEILRNGFVEAFDPRFERPPPQ 360 >gi|297621442|ref|YP_003709579.1| hypothetical protein wcw_1216 [Waddlia chondrophila WSU 86-1044] gi|297376743|gb|ADI38573.1| hypothetical protein wcw_1216 [Waddlia chondrophila WSU 86-1044] Length = 767 Score = 53.4 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 40/399 (10%), Positives = 109/399 (27%), Gaps = 39/399 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFRED----FERQATLIVGKKIAVKGGIKIH 57 ++ + + LF G + R G + + +I Sbjct: 1 MKWIKQAIFILF----AGFLLFGALLQLDSVRSRMKTFLIESIESGTGYTVQIG---QIR 53 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-NFYL 116 + P + KDI + + L + L LL G++R ++I+ + N Sbjct: 54 LFPSFQMTAKDIVFM--DGEVPLAAFNHLHLGIYPLDLLKGKLRFSTLHIEGVDVLNLPK 111 Query: 117 S------SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQ---ESDQVYFLSDLNL 167 + + + ++ I+ I + + S+ N+ Sbjct: 112 ETLKSEGKNSTISMIAIEDFFIEKIHWSIKGINPPDYPISLKGSLIVDQQHDLIYSNFNV 171 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 S + + L + G+++ + D R++ + + Sbjct: 172 F-SPQSSGVSGDLRYEKKNGTLLLQQE---DGFRASLAFVMDESRGVRVPRFLATWHETT 227 Query: 228 YPIIIDLFGNLFWNEKQPIYSGV-----FSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 + + S ++G + S ++ + +S Sbjct: 228 IDGKFSVTQTGGIEDSAFFLSIDDLSQMVPISGALLGEAVISGSINSPKI--DLSLSSNQ 285 Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQ-DEENLLNFSENGAESMHDLNETDFFEEEEKKN 341 + ++ + + ST ++ E F + D F + + + Sbjct: 286 LSGFGQTVEKLKLHLSTSGKGSFSLAFVKNEQDYMF---SSALTWDQKTPWFPTQLDLRL 342 Query: 342 KNDDLKKDDIQYSVNKKEEKDNSHDKENQ-ENFSGDKMI 379 + + + + + + +NQ F + + Sbjct: 343 PLEKVAQLANWDVADIDGQLLINVRYQNQTLTFKAELLE 381 >gi|312958983|ref|ZP_07773502.1| hypothetical protein PFWH6_0880 [Pseudomonas fluorescens WH6] gi|311286753|gb|EFQ65315.1| hypothetical protein PFWH6_0880 [Pseudomonas fluorescens WH6] Length = 1271 Score = 53.0 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 36/267 (13%), Positives = 82/267 (30%), Gaps = 17/267 (6%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 +R E +A VG + G ++ F P + +D+ + + GS +++ + + Sbjct: 43 YRAQVEARAEGAVGMPTHI-GSLEGRWSGFAPVLLARDVMVGE---GSNALRLDQVEVVP 98 Query: 91 EFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149 + L E+R+ + + L+ G D + + + ++ Sbjct: 99 DIWASLMAREVRLAHLQLSGLQLSAKEDKDGHWALQGLPMQDDQPLDP---EQLLTRMQM 155 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208 D L L+ A LS+ + + D + A + + Sbjct: 156 VKRVSLLDSQVTLQPLD---QAPLTLTYVGLSLHTGVTRQRLDARLTLPDGQPLAVSLRS 212 Query: 209 ---NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265 K+ + + L + I W Q G F + + + + Sbjct: 213 RIRASQWKDAQVQAYLSLPQSDWAKWIPAKLTQQWKLTQFKAGGEFWLNWGKGTVQSAVV 272 Query: 266 SAKKSRLSGNFKISDGNVRISRYKLQS 292 ++ G++ V I L + Sbjct: 273 RLNSPQVKGSY-AERKPVHIENLALTA 298 >gi|311695341|gb|ADP98214.1| conserved hypothetical protein [marine bacterium HP15] Length = 1251 Score = 53.0 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 13/175 (7%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLS 87 + FR+D R+ + +G +++ G P+ DI++ + G + ++ L+ Sbjct: 54 NVDSFRDDLARELSDRLGHDVSIGGLSSQWYWLDPAFTASDIQVTHPDTGIVVANLQHLN 113 Query: 88 MRA-EFLPLLSGEIRVFDMYIDQPHLNFYLSSKG----VSNWFQRKSTMDMIHNVILEK- 141 +R L+ I D D L G + + + L Sbjct: 114 IRFAALASLMRLRIVFEDFQADGLELTVNQERGGDVAVRGAEIPEPVSNQLQEWLELAGD 173 Query: 142 ------IHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189 + + + I D + + + + L+L + + Sbjct: 174 WLSDPYVKITRVNLGIRDNQGNLRHLDIPQLDLDYRRGLFHASGRAMQSGTTQQL 228 >gi|269469166|gb|EEZ80708.1| hypothetical protein Sup05_0618 [uncultured SUP05 cluster bacterium] Length = 830 Score = 53.0 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 32/299 (10%), Positives = 87/299 (29%), Gaps = 11/299 (3%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-P 62 +V + + ++++V + + + + E Q + + + +K I Sbjct: 14 KVSTWISAIVALLVVLSVAFFVAF-PSLIKAPIEHQISHLSNLNVELK-KITFDFERRGL 71 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 ++ + + E + + L R + L + ++Y+D L + + Sbjct: 72 ALKIHGLEVSSLEKKQPIASVNILKWRLNLMSLFEDIFQPSNIYLDTLTLYSSVDPQDRE 131 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + N+ K I + ++ ++ + L + L + Sbjct: 132 FSVDDIKQLISSENLATLHF-FKSLTINKTLIKGREIIQIAPIKL------SRDEAQLLL 184 Query: 183 DSIKGSVIAEGTG-NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + G N ++A ++K ++L + + + ++ L Sbjct: 185 KIKDQDIDLGGMASNLGKVDITATLSATQSEQDKFLTLPLLISSDDFSLMSHLKIFNEGG 244 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 E + S L S + + ++S KL S Sbjct: 245 EDFVEFVSYLDQVEIDSIGEYLPPKLLSSATYAWLNRAFVSGKLSNVKLNVKKNLSKQT 303 >gi|289676034|ref|ZP_06496924.1| hypothetical protein PsyrpsF_22360 [Pseudomonas syringae pv. syringae FF5] Length = 532 Score = 53.0 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 32/278 (11%), Positives = 83/278 (29%), Gaps = 28/278 (10%) Query: 55 KIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113 ++ PF + + I G + E L + L + + + + + +P Sbjct: 19 RLEFNPFTLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRVELIKPRTE 76 Query: 114 FYLSSKGVSNWFQRKSTMDM----------IHNVILEKIHVKGGRIKIIDQESDQVYFL- 162 +G N Q + +++I + GG + D Q Sbjct: 77 LLFDKQGKLNLAQLFKLPASEPAKDEPATKPFPLRIDEIKLAGGYVHFQDLRPSQPIEFL 136 Query: 163 ---SDLNLQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANF------ 210 D L+ + + +++ + G + G + S + Sbjct: 137 YDALDFELKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPIASEGTLKVTDSKMKLW 196 Query: 211 -PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK 269 P A+ L ++ L + L + K S + + + ++ Sbjct: 197 WPYVRDALPLALEDGVLNFSTAYTLNLSKETELKLTNVSASVAPFALNAPDGRPLVRLQR 256 Query: 270 SRLS-GNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 +S + ++ V + + + Q + ++ + D + Sbjct: 257 LDVSETSVDLAKQLVTVGKVRSQKLETWAAREADGQLD 294 >gi|296125685|ref|YP_003632937.1| hypothetical protein Bmur_0638 [Brachyspira murdochii DSM 12563] gi|296017501|gb|ADG70738.1| conserved hypothetical protein [Brachyspira murdochii DSM 12563] Length = 1086 Score = 52.6 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 40/381 (10%), Positives = 99/381 (25%), Gaps = 32/381 (8%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI--DQKEDGSFESKI 83 + + + E +K+ + G +L FP + D+ + + KI Sbjct: 53 YFNNERVKNLIEDIVYSSTDRKLEI-GDFNYALL-FPKIELSDVVLYNSSNFNNEENIKI 110 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIH 143 + L +R L ++ + + ID ++ + G N + I + E Sbjct: 111 DNLRLRFSLFSLFLLKLHIKEFSIDNLYVYMFTDESGNWNLPDLPPSEPKIEDTNKEPFD 170 Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS-IDSIKGSVIAEGTGNFDNKRS 202 + + + + + +++L + ++ P + + + + + Sbjct: 171 MSKLDF-LKLKANIENIRINNLAFKADSKSFLTNEPNNGLIASLSNYNLHLDLHSKRFSL 229 Query: 203 AFKITANFPAKNKAISLK--------------IQLFPLAYPIIID---LFGNLFWNEKQP 245 + + N P K I LK + + + I +E Sbjct: 230 SQVMGVNAPEVLKDIYLKSFISSSLAYNDSSILFNDNPLFNLDISYPKKEEGFSEDEIII 289 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 + + + L + + +V + + + + Sbjct: 290 RFDFEIDEPNFTYNGKKRDDIQASAHLFARYNVKTQSVYLENLSSELLN-DEILKVIASA 348 Query: 306 KVSQDEENLLNFSENGAESMHDLNETDFF--------EEEEKKNKNDDLKKDDIQYSVNK 357 +N A D T N + D I N Sbjct: 349 NQIFSSNIGVNLDTLYARINLDKVNTLVPMIVPDLGINVGGMVNVDADKTIGTINDLTNT 408 Query: 358 KEEKDNSHDKENQENFSGDKM 378 + + S D + Sbjct: 409 INISLDKIKLSMGDTISVDNL 429 >gi|71276039|ref|ZP_00652320.1| conserved hypothetical protein [Xylella fastidiosa Dixon] gi|71163122|gb|EAO12843.1| conserved hypothetical protein [Xylella fastidiosa Dixon] Length = 1286 Score = 52.2 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 30/286 (10%), Positives = 79/286 (27%), Gaps = 21/286 (7%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92 + ++ G+ + + P + + +RI + + + + Sbjct: 56 QQVADWLSVRAGQPVRFD-TLSTSWTQRGPLLRLQGVRI----GPQGKVGVGQVEVLVAM 110 Query: 93 LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKI---HVKGGRI 149 L + ++ + L + S G + + + +L + V GGR+ Sbjct: 111 YTGLLPGHSLIELRLRGMALTVHRDSAGRWSVYGLPRDVGGDPLEVLRRFGELQVIGGRL 170 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209 + S LS +NL++ + + + G +FD + Sbjct: 171 SVDAPSSGVSTTLSQINLRVRVAGDRLRAGVHGWLDSARAPVTGVVDFDRVSGDGDVYVE 230 Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI-----YSGVFSVAGDFSKLLNLE 264 A + + + D G++ + + + G + + L Sbjct: 231 TLPNQLASWSSLLAGVMRGVHLRDGAGHVRAWAQLHRHHVEQVTVQGDLQGVRFEGVRLA 290 Query: 265 LSAKKSR-------LSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 R + ++ R+ +L+ D Sbjct: 291 GQTVVPRVFWPQLQVLVRWQRQGDGWRVVAPRLRMGESGRLQKLDG 336 >gi|188994012|ref|YP_001928264.1| hypothetical protein PGN_0148 [Porphyromonas gingivalis ATCC 33277] gi|188593692|dbj|BAG32667.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 1582 Score = 52.2 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 35/290 (12%), Positives = 77/290 (26%), Gaps = 26/290 (8%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI 83 P W ++A+ G +I + +I + + +DI K G + I Sbjct: 19 PPIQQW--AVGIATQKASEATGMQIGIG---RIRLGFPLHLSLQDIT-AVKVQGDTLADI 72 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLN-------FYLSSKGVSNWFQRKSTMDMIHN 136 L + LPLL ++ V ++ + ++ L K S + Sbjct: 73 GSLRVSVSVLPLLRRQMEVPELKLQDASIHYTDSLGLMDLRLKAKSIRAAHIAIDPEAKR 132 Query: 137 VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI------ 190 V+L + + I ++ + ++ + Sbjct: 133 VVLGRWQLSDTDIAYFSADTTATDTTQKEPFDWQFELDRLDLKNISAEVRMPLDSVLLKT 192 Query: 191 AEGTGNFDNKRSAFK---ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 G + ++ + A P D + Sbjct: 193 FVGKAAIAKAKMDIADMLYQVGMAQLDRTVLSYDTDEGEASPTSFDYRHIALNDVSLQAK 252 Query: 248 SGVFSVAGDFSKLLN----LELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 F +L+N + RLSG +++ ++ L + Sbjct: 253 DICFHDGDMELQLVNGSLRERDRFELQRLSGRYRMDRFGFLLTDLSLATG 302 >gi|258627020|ref|ZP_05721818.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258580694|gb|EEW05645.1| conserved hypothetical protein [Vibrio mimicus VM603] Length = 1292 Score = 52.2 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59 L R+L+ L +VL A T + F+ + + ++A+ Sbjct: 8 LGRILMWLLVSLLIVLALAVTGLRILLPQMNRFQAEIQHWLNQNSSVQVAIADVKGYWRN 67 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113 PS+ + ++ + + + + + L L + + D+ I+ L+ Sbjct: 68 THPSLSLQALQAHWPDSNDIQLNAASIEIEFDLLQSLWERQPVIADLTINGMVLDLRAID 127 Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168 + + R +D + L+ +K I D + + L Q Sbjct: 128 WLALEQNPNPRQSRQGRVVQQLDDLLLRQLDDFTLKNSAILYRTFVGDMRQLDIEKLRWQ 187 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 S + +SI S G+ + F ++A+ ++ ++ Sbjct: 188 NSGQRHFTEGVVSIAGTNINSLLVSANFMDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281 + QP G + N E + + SG K + Sbjct: 248 QTGIQKGQLSFNAWATLEHNQP-IDGYVELKPSELVWQNGEQNHELLLESGIVELKPTKQ 306 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 +++ + L+ + + + N + + Sbjct: 307 GWQVNAHSLR-LRSDDVLWPLLDVAMDWQP-NEWRLNLSQLNID 348 >gi|311696755|gb|ADP99628.1| secreted protein containing DUF748 [marine bacterium HP15] Length = 941 Score = 52.2 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 76/235 (32%), Gaps = 28/235 (11%) Query: 64 VFFKDIRID-QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + ++ + ++ +S+ A L EIR+ + +D+ + S+ G Sbjct: 285 LQLENFAVALDEQSEQARLTNAEVSVDAVGFDLNGREIRIGQVSLDKLDVAVARSANGEI 344 Query: 123 NWFQR-------------KSTMDMIHNVILEKIHVKGGRIKIID--QESDQVYFLSDLNL 167 +W ST + + + GGRI D + + L+ Sbjct: 345 DWLAPLATNNGETEGGGEASTGGQPFRWSVAGVALSGGRILWQDSQPATATEIAVEQLSA 404 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL-------- 219 I + P+S + I GS+ + G + + + + T I+L Sbjct: 405 SIGQLSHQLEEPVSYE-ITGSLASGGQLSLNGQVTPAPFTLEAAISGNGIALAAFEPYVQ 463 Query: 220 ---KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR 271 + + + +L + +SG VAG KL + S + Sbjct: 464 EGANLAITSGTLGVDGNLDLDGQQEPLTGTFSGTAEVAGLDLKLPDSSGSLVSWQ 518 >gi|170729678|ref|YP_001775111.1| hypothetical protein Xfasm12_0471 [Xylella fastidiosa M12] gi|167964471|gb|ACA11481.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 1286 Score = 52.2 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 31/286 (10%), Positives = 79/286 (27%), Gaps = 21/286 (7%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92 + ++ G+ + + P + + +RI + I + + Sbjct: 56 QQVADWLSVRAGQPVRFD-TLSTSWTQRGPLLRLQGVRI----GPQGKVGIGQVEVLVAM 110 Query: 93 LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKI---HVKGGRI 149 L + ++ + L + S G + + + +L + V GGR+ Sbjct: 111 YTGLLPGHSLIELRLRGMALTVHRDSAGRWSVYGLPRDVGGDPLEVLRRFGELQVIGGRL 170 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209 + S LS +NL++ + + + G +FD + Sbjct: 171 SVDAPSSGVSTTLSQINLRVRVAGDRLRAGVHGWLDSARAPVTGVVDFDRVSGDGDVYVE 230 Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI-----YSGVFSVAGDFSKLLNLE 264 A + + + D G++ + + + G + + L Sbjct: 231 TLPNQLASWSSLLAGVMRGVHLRDGAGHVRAWAQLHRHHVEQVTVQGDLQGVRFEGVRLA 290 Query: 265 LSAKKSR-------LSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 R + ++ R+ +L+ D Sbjct: 291 GQTVVPRVFWPQLQVLVRWQRQGDGWRVVAPRLRMGESGRLQKLDG 336 >gi|307579440|gb|ADN63409.1| hypothetical protein XFLM_07485 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 1271 Score = 52.2 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 31/286 (10%), Positives = 79/286 (27%), Gaps = 21/286 (7%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92 + ++ G+ + + P + + +RI + I + M Sbjct: 41 QQVADWLSVRAGQPVRFD-TLSTSWTQRGPLLRLQGVRI----GPQGKVGIGQVEMLVAM 95 Query: 93 LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN---VILEKIHVKGGRI 149 + + ++ + L + S G + + ++ L ++ V GGR+ Sbjct: 96 YTGILPGHSLIELRLRGVALTVHRDSAGRWSVYGLPRDVEGDPLEVLRRLGELQVIGGRL 155 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209 + S LS +NL++ + + + G +FD + Sbjct: 156 SVDAPSSGVSTTLSQINLRVRVAGDRLRAGVHGWLDSARAPVTGVVDFDRVSGDGDVYVE 215 Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI-----YSGVFSVAGDFSKLLNLE 264 A + + + D G++ + + + G + L Sbjct: 216 TLPNQLASWSSLLAGVMRGVHLRDGAGHVRVWAQLHRHHVEQVTVQGDLQGVRFEGGRLA 275 Query: 265 LSAKKSR-------LSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 R + ++ R+ +L+ D Sbjct: 276 GQTVVPRVFWPQLQVLVRWQRQGDGWRVVAPRLRMGESRRLQKLDG 321 >gi|326317328|ref|YP_004235000.1| AsmA family protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374164|gb|ADX46433.1| AsmA family protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 766 Score = 52.2 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/434 (8%), Positives = 90/434 (20%), Gaps = 92/434 (21%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFP--------------SVFFKDIR 70 DW R + + G+ A++G + P P +V + + Sbjct: 46 TFDWNRARPWINERVSAATGRHFAIEGDLTARWHWPQPADMETGWRRWVPGLTVQAERMV 105 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV--------- 121 + + D + + A+ + S+ Sbjct: 106 LGNRADFGRYGAVGMDAGNADARVVERRASAASATAPASGVPASPASAPASAASAPEAAG 165 Query: 122 -----------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL--Q 168 + + + L HV G + I + N Sbjct: 166 AAGASGSGPVPPSMATVGRATASLKLLPLLVRHVSIGTLSIQTPDVALARRADGSNNWTF 225 Query: 169 ISARFLNIISPLSIDSIKGSVIA-EGTGNFDNKRSAFKITANFPAKNKAISLKIQLF--- 224 SP ++ +G + R A+ +++ ++ Sbjct: 226 DRPAPDGSASPNPWTVNVARLVVNDGRLALSDARKDLAFVAHLATQSQPGPYGVRFDVRG 285 Query: 225 -------------------------------PLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253 A + ++ G L + Sbjct: 286 RYAKARIEGSGQAGNVLSLRQQDVQYPLQFKARAGTVRAEVEGTLANPLALAGMDLQVLL 345 Query: 254 AGDFSKLLNLELSAKKSR---------LSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 + L L G+ + + + + Sbjct: 346 QAESMADLYPLTGLVLPNTPPFRTKGHLVGSLEPGRAVWDYRDFTGMVGQSD----LRGQ 401 Query: 305 TKVSQDE-ENLLNFSENGAESMH-DLN-----ETDFFEEEEKKNKNDDLKKDDIQYSVNK 357 + + L + DL + +E+ +K D ++ ++ Sbjct: 402 LTYTSGQPRPRLKGEMASRQLRLADLGPVVGAPSGERPQEKGTSKRAGKVLPDASFATDR 461 Query: 358 KEEKDNSHDKENQE 371 D + + Sbjct: 462 WNAMDLDLTFKGER 475 >gi|325298012|ref|YP_004257929.1| hypothetical protein Bacsa_0863 [Bacteroides salanitronis DSM 18170] gi|324317565|gb|ADY35456.1| hypothetical protein Bacsa_0863 [Bacteroides salanitronis DSM 18170] Length = 1001 Score = 52.2 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 31/263 (11%), Positives = 77/263 (29%), Gaps = 31/263 (11%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL---PFPSVFFKDIRIDQK- 74 A + + A + K+ +K +++ P + + + K Sbjct: 27 IALAINFIFTPEKLTPVVLKVANQTMNAKLDMK-SVELTFFSTFPRFGLKLTEGSLVSKA 85 Query: 75 ------EDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127 E + L +I V + ++ + Y + +GV+NW Sbjct: 86 VSDSVWEKTDSLLAFGKCVVVVNPLDYFYKSKITVNYLGVEDASIYAYKNKEGVANWDIL 145 Query: 128 KSTMDM----------------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 K+ + + K+ +K + D+++ L + +L + A Sbjct: 146 KTDTASVQAPADTVVSDTVRPLTGGIDIRKVSLKRANVTFDDRDTRVYASLRNASLALRA 205 Query: 172 RFLNIISPLSIDSIKGSVIA--EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 S LS+ ++I +G + + + ++L Sbjct: 206 SLYKERSRLSVGFKNDNIIFWQDGQLLVNRIATELNADVELERATRLLTLN-DAGISVNG 264 Query: 230 IIIDLFGNLFWNEKQPIYSGVFS 252 + D+ G L + + + Sbjct: 265 VRFDVKGTLRGDSARHALAVNLE 287 >gi|146282817|ref|YP_001172970.1| hypothetical protein PST_2475 [Pseudomonas stutzeri A1501] gi|145571022|gb|ABP80128.1| conserved hypothetical protein [Pseudomonas stutzeri A1501] Length = 356 Score = 52.2 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 85/291 (29%), Gaps = 16/291 (5%) Query: 53 GIKIHILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110 + + + + + I++K+ + K + + + +L V ++ QP Sbjct: 49 DVDLVWWRG-AYRVEGLLIEKKDKRVQAPLFKAPSIDIAISWDAILRHREIVGEVVFKQP 107 Query: 111 HLNFYLSSKGVSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 HLNF + + + L +I V G++ + SD + + Sbjct: 108 HLNFVDGGDSGDSQSGEGVDWRDQLDALVPITLNEIRVVDGQLSFRNFSSDPQVHVYASD 167 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 +Q S L + + + + G F+ + + + +++ + Sbjct: 168 IQASLYNL-TNTDDADGTRTATFEGTGKL-FNQAPIEATARFDPFTDWEDFEVNLRVTGV 225 Query: 227 AYPIIIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 + DL ++ V V + S+L K L Sbjct: 226 PLKQLNDLSRAYANFDFAGGTGDLVVEVEANDSQL----DGYIKPLLRNVDIFDYEQDVA 281 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLL--NFSENGAESMHDLNETDFF 334 + K + + + ++ +G D++ F Sbjct: 282 NEDKGFFRGLWEAVVGGGQEVLKNQRKDQFATRVELSGTTKETDVSPFQAF 332 >gi|77747641|ref|NP_778647.2| hypothetical protein PD0417 [Xylella fastidiosa Temecula1] gi|182680973|ref|YP_001829133.1| hypothetical protein XfasM23_0411 [Xylella fastidiosa M23] gi|182631083|gb|ACB91859.1| conserved hypothetical protein [Xylella fastidiosa M23] Length = 1274 Score = 52.2 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 31/286 (10%), Positives = 79/286 (27%), Gaps = 21/286 (7%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92 + ++ G+ + + P + + +RI + I + M Sbjct: 44 QQVADWLSVRAGQPVRFD-TLSTSWTQRGPLLRLQGVRI----GPQGKVGIGQVEMLVAM 98 Query: 93 LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN---VILEKIHVKGGRI 149 + + ++ + L + S G + + ++ L ++ V GGR+ Sbjct: 99 YTGILPGHSLIELRLRGVALTVHRDSAGRWSVYGLPRDVEGDPLEVLRRLGELQVIGGRL 158 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209 + S LS +NL++ + + + G +FD + Sbjct: 159 SVDAPSSGVSTTLSQINLRVRVAGDRLRAGVHGWLDSARAPVTGVVDFDRVSGDGDVYVE 218 Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI-----YSGVFSVAGDFSKLLNLE 264 A + + + D G++ + + + G + L Sbjct: 219 TLPNQLASWSSLLAGVMRGVHLRDGAGHVRVWAQLHRHHVEQVTVQGDLQGVRFEGGRLA 278 Query: 265 LSAKKSR-------LSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 R + ++ R+ +L+ D Sbjct: 279 GQTVVPRVFWPQLQVLVRWQRQGDGWRVVAPRLRMGESRRLQKLDG 324 >gi|183219754|ref|YP_001837750.1| hypothetical protein LEPBI_I0330 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909890|ref|YP_001961445.1| hypothetical protein LBF_0321 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774566|gb|ABZ92867.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778176|gb|ABZ96474.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 702 Score = 52.2 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 42/421 (9%), Positives = 117/421 (27%), Gaps = 46/421 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + + L+ F+ S+ + PL D ++ + + K + PF Sbjct: 13 IGKTLLTFIFVISMTMF-FILYPLLADPDYYKNLILESTYKLTELNVNYKSSEPV-FFPF 70 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK-- 119 P + ++ + + +D + L + + + + + +Y++ + Sbjct: 71 PGIELNEVTVSKADD--EIIHVNKLRIEIYYGVFIGKSLELRKIYLNTGTVEITREKDES 128 Query: 120 --------GVSNWFQRKSTMDMIHNVI-------------------LEKIHVKGGRIKII 152 N +K T + I ++ + +I +K I Sbjct: 129 FPLFERLSSQPNPDPKKKTKNEIESLDSNTEETPTELYFSKTFVNFVNQIEIKNITILFE 188 Query: 153 DQESDQVYFLS--DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF-KITAN 209 D+ + L + L + N+ L + F + + + Sbjct: 189 DKLYSRNINLYLWETTLHLDQDLRNLDFYLYGKLNHEPITLSSNFFFVEDKMTYESLRLE 248 Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLF-----GNLFW--NEKQPIYSGVFSVAGDFSKLLN 262 + + + L DL G + + ++ IY+ + + L + Sbjct: 249 GELQFQNLKGIDLHDILIIFTRGDLRFVKTTGTIPFYKRDESKIYAVIDQLHIKDLALKD 308 Query: 263 LELSA-KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321 + A ++ I++ + ++ + + ++F Sbjct: 309 GKTFADGHVSTLMHYDINESKFNFANIVIEWKGKSKLYASGYVNFLKPPLSPTVSFEATS 368 Query: 322 AESMHD--LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 L + + + + + Y + + N +F D + Sbjct: 369 DYLDVPSILKVAKIWIDPDFEKSILTRGLPNTGYVNRMNVYLNFNFRNLNIADFKADSLK 428 Query: 380 L 380 L Sbjct: 429 L 429 >gi|197122231|ref|YP_002134182.1| AsmA [Anaeromyxobacter sp. K] gi|196172080|gb|ACG73053.1| AsmA [Anaeromyxobacter sp. K] Length = 879 Score = 52.2 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 31/270 (11%), Positives = 78/270 (28%), Gaps = 33/270 (12%) Query: 38 RQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS-FESKIEGLSMRAEFLPLL 96 + + +G+ +AV+ +K +L V + + E + +E + + L Sbjct: 44 DRLSQQLGRPVAVE-RVKTRLLGGVGVRVAGVSVGAGEGEDRPLATLERAEVEVNLVGAL 102 Query: 97 S---GEIRVFDMYIDQPHLNFYLSSKGVSNWF-------------------QRKSTMDMI 134 + V + +D +N G +N + + Sbjct: 103 LSGGKRVTVREAVVDGLRVNVIRFPDGTTNLERVAKRLQETSAKEPAAEAPAGEQKPADL 162 Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 V +++ V+ RI +D+ L +L + R L PL + + Sbjct: 163 SAVRVDRAAVENARIAFLDRSVKGAEELYVDDLDVEVRDLRAGRPLEVVLKAAVLAKAQN 222 Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254 K + T + + ++ P + G + + ++ Sbjct: 223 LELRVKAAPLPPTLVPTPEQLTLKVQPIDLGPLAPF---VPGEAGFRGGRFQADLAVALG 279 Query: 255 GDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + ++ + G F+ Sbjct: 280 AA------VPGGSGRTTVKGGFRADQLAFA 303 >gi|119713302|gb|ABL97367.1| hypothetical protein ALOHA_HF1045G01.0036 [uncultured marine bacterium HF10_45G01] Length = 496 Score = 51.8 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 47/346 (13%), Positives = 112/346 (32%), Gaps = 23/346 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 ++++ LF + V +P F + TD E+ +++ + IK + P P Sbjct: 42 KIILTFVALFV-IFVSYLLLPTFYNKTDISEELKKELQDKLDLNFRFSENIKYNFFPKPH 100 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGVS 122 D +I K SKI + F L S +I + D+ ++ + N ++K + Sbjct: 101 FIITDSKIYYK--QEEISKISKSKIFISFDNLFSISDIEIRDVILENSNFNL--NAKNYN 156 Query: 123 NWFQRKSTMDMIHNVILEK----IHVKGGRIKIIDQESDQVYFLSDLN----LQISARFL 174 + + + ++I+E + +I + Y+ Sbjct: 157 FFLELLNRSFKNGDLIIEDSNVIFRHSDSEVLLISKIFKMKYYYESNEEKNIFFSENEIF 216 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK-------AISLKIQLFPLA 227 NI + +G + N + + + F + K + L+ Sbjct: 217 NIPFTIESFFSEGKNEFFSSINLNLMKLKIQNQLTFKNEKKIGKSEFVSNKLRRIAEYQI 276 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 + + ++ IY G F+ ++ L + + L G I ++ Sbjct: 277 EKNSFNFYIFDKIDQPDVIYKGKFNFKPFYANLEGNQNEINFNYLFGTNAIIAQLLKTEI 336 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 + + + + + + + + + + D + T F Sbjct: 337 F--NNTNIDFKLNINADSIYKNSNFKNIKLNSKIQDGLIDTDNTKF 380 >gi|126735608|ref|ZP_01751353.1| hypothetical protein RCCS2_17071 [Roseobacter sp. CCS2] gi|126714795|gb|EBA11661.1| hypothetical protein RCCS2_17071 [Roseobacter sp. CCS2] Length = 1095 Score = 51.8 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 42/351 (11%), Positives = 87/351 (24%), Gaps = 40/351 (11%) Query: 29 WTDFREDFERQATLIV-GKKIAVKGGIKIHILPF--PSVFFKDIRIDQKEDGSFESKIEG 85 + E E +A ++ G ++ G I + I P+V D R+ G S + Sbjct: 54 PSWIIERIEARADDVLEGARLEF-GAITVRIGRDLHPTVRLVDTRLVDA-GGLTLSSVPI 111 Query: 86 LSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR----------------- 127 + +L E+ + D+ + +N + G ++ Sbjct: 112 VEGLMSPRGLILQQEVLMQDVRLIGAQVNLRRARDGSVSFALTTGGNDLGQARSLPELLE 171 Query: 128 --KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 + LE + G + D + + + + + + R + + Sbjct: 172 QFDQVFERPALEALETVRADGLIVNFDDARAGRSWIVDGGRVSLDLRGGETTIRGNFALL 231 Query: 186 KGSVIA-----------EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 G F + + A++ A+ L + I L Sbjct: 232 SGGTNVTTVRLNYTSPRGSRAAFMGLNLDNALATDIAAQSPALR---WLQGVDAQITAAL 288 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 L + + + F IS +L Sbjct: 289 RTQLDETGALGPLNASLEIGQGVLQPNPATQPIGFDDAKAYFTYDPVRDSISFNELSLET 348 Query: 295 PNSSTDEDNKTKV-SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344 D + + S LN FFE + + Sbjct: 349 EWGRLRADGDAYLRDFRDGLPRALLAQFRFSDLVLNPPGFFETPPEIPQAA 399 >gi|220910219|ref|YP_002485530.1| hypothetical protein Cyan7425_4866 [Cyanothece sp. PCC 7425] gi|219866830|gb|ACL47169.1| protein of unknown function DUF490 [Cyanothece sp. PCC 7425] Length = 1601 Score = 51.8 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 37/327 (11%), Positives = 88/327 (26%), Gaps = 32/327 (9%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--------SFES 81 + E + ++ + + + +I + S+ F I + Sbjct: 50 NELAPTIETNLSQLLNRPVKLGKLEQITL---TSLRFDRTTIPPFSQQVGGQTIREQDSA 106 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN-VILE 140 + + LL + + QP LN +G Q + L+ Sbjct: 107 MAAAVEVNFNPWDLLWSRSLNLAVSLKQPQLNLVQDKEGRWLRTQLQPLKPSGWFTTNLQ 166 Query: 141 KIHVKGGRIK-IIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFD 198 I V+ +I + + + N+ ++ + + L ++ G + +G Sbjct: 167 SIQVQQAQITALPYGANPRQLTGVQGNVLLADQGQRLRFDLQGQVVQGGDLKLDGEWRNP 226 Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPLAYPI----------IIDLFGNLFW---NEKQP 245 + + A +L + + NL + P Sbjct: 227 AQDLKLTLRTRNLAATVVNNLFPEQKVAPVVGGPPVDVVQIQRGQVDSNLRLYLRQGELP 286 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR---YKLQSILPNSSTDED 302 G V KL+N+ S + R+ G ++ + + + L D Sbjct: 287 QVEGTAQVRDLALKLVNVPQSLQ--RIEGQVRLQGLTAVLEQGKGFFGDIPLKGVRGTID 344 Query: 303 NKTKVSQDEENLLNFSENGAESMHDLN 329 + + + + L Sbjct: 345 QQGFNLSGHIPPVEVNRSLKTLALKLT 371 >gi|28056403|gb|AAO28296.1| conserved hypothetical protein [Xylella fastidiosa Temecula1] Length = 1286 Score = 51.8 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 31/286 (10%), Positives = 79/286 (27%), Gaps = 21/286 (7%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92 + ++ G+ + + P + + +RI + I + M Sbjct: 56 QQVADWLSVRAGQPVRFD-TLSTSWTQRGPLLRLQGVRI----GPQGKVGIGQVEMLVAM 110 Query: 93 LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN---VILEKIHVKGGRI 149 + + ++ + L + S G + + ++ L ++ V GGR+ Sbjct: 111 YTGILPGHSLIELRLRGVALTVHRDSAGRWSVYGLPRDVEGDPLEVLRRLGELQVIGGRL 170 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209 + S LS +NL++ + + + G +FD + Sbjct: 171 SVDAPSSGVSTTLSQINLRVRVAGDRLRAGVHGWLDSARAPVTGVVDFDRVSGDGDVYVE 230 Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI-----YSGVFSVAGDFSKLLNLE 264 A + + + D G++ + + + G + L Sbjct: 231 TLPNQLASWSSLLAGVMRGVHLRDGAGHVRVWAQLHRHHVEQVTVQGDLQGVRFEGGRLA 290 Query: 265 LSAKKSR-------LSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 R + ++ R+ +L+ D Sbjct: 291 GQTVVPRVFWPQLQVLVRWQRQGDGWRVVAPRLRMGESRRLQKLDG 336 >gi|88797989|ref|ZP_01113576.1| hypothetical protein MED297_01095 [Reinekea sp. MED297] gi|88779186|gb|EAR10374.1| hypothetical protein MED297_01095 [Reinekea sp. MED297] Length = 625 Score = 51.8 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 15/145 (10%), Positives = 43/145 (29%), Gaps = 3/145 (2%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ F + + L ++ E + G ++ V + + + P Sbjct: 1 MKLFRWSGLIGFVLFTAVLMIIGLLFLDGWTKKAVEAAGFQVNGAEVTVA-DVDLTLSP- 58 Query: 62 PSVFFKDIRIDQKED-GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 F+ + + +D +I + + F L G +R+ D+ + + Sbjct: 59 LGFRFEQVAVADADDPMRNAVEIGQMRLAINFAQLFLGNVRLEDVTVADVQTRTEREAPA 118 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVK 145 + + + V+ Sbjct: 119 RLAESAENDSDSAGAEPSVAEQQVE 143 >gi|51245490|ref|YP_065374.1| hypothetical protein DP1638 [Desulfotalea psychrophila LSv54] gi|50876527|emb|CAG36367.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54] Length = 1130 Score = 51.8 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 85/289 (29%), Gaps = 27/289 (9%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDG 77 G F VP +I + K+ ++ +K + F S+ +I+ + Sbjct: 66 GFFAVPYYI-----KNVLPEYVAAHSEFKLEIE-EVKANPFSFEISIIKAEIKKPGANNH 119 Query: 78 S-FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--------- 127 I+ LS E L LL + ++ HL + N+ Sbjct: 120 QAPLLSIDSLSTAIEPLGLLHKKFTSRRSTLNGVHLALKKEGANLYNFGSLFKDKNGKLI 179 Query: 128 ---KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 + + + I ++ G D Q + D+ + + Sbjct: 180 TNIAAIKESLFLFSFNNIVMENGSFVFQDIPGKQTHHGKDIKISLPTINNFDSGTEITTK 239 Query: 185 IKGSVIAEGT-GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243 S I G+ +F + K+ + L PL P I Sbjct: 240 PYFSAIINGSPIHFSKNSYGKDSRISCEVKDLDLPLYFSYLPLHIPFEI------KSGLG 293 Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 F+ + + L L ++ + ++ ++ I R ++++ Sbjct: 294 TGSIDLFFNSTENSVETLTLGMNITATNITLRHNSKKASINIPRSQIRA 342 >gi|302341921|ref|YP_003806450.1| AsmA family protein [Desulfarculus baarsii DSM 2075] gi|301638534|gb|ADK83856.1| AsmA family protein [Desulfarculus baarsii DSM 2075] Length = 766 Score = 51.8 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 36/268 (13%), Positives = 82/268 (30%), Gaps = 20/268 (7%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAE 91 + + G++ V+ I + +L + K +RID G K++ L + Sbjct: 35 DMAVQAIHEHTGRQARVE-SIDLRLLGGAELEVKGLRIDDLPRFGGRPLLKLDRLLVEFG 93 Query: 92 FLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI 151 LPLL+ ++ + + +D L+ +G N + + Sbjct: 94 LLPLLTRKVDLGQVLVDGLELSLVRDQQGALNTDFAAAQPPADQPAAPPETPPAEAPAAD 153 Query: 152 IDQESD---QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208 + +S + ++ + L + + + + + A Sbjct: 154 EPHAGSLIVRRLAISGSTIFLANLATGSQASLPLQKAELTTEFDAQTPLIQAQLAM-PGL 212 Query: 209 NFPAKNKAIS----LKIQLFPLAYPII-------IDLFGNLFWNEKQPIYSGVFSVAGDF 257 A S LK ++ ++L G L V Sbjct: 213 GIEASGGQASAPAELKAEIDLAQLGQRLIVVWPGLELAGELKLAAAAVGPDNQ-KVINAS 271 Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRI 285 + LNL +S+ F+++D ++ + Sbjct: 272 CRALNLRISSPTPG-QAPFELADADLTL 298 >gi|296535642|ref|ZP_06897820.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] gi|296264037|gb|EFH10484.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] Length = 1058 Score = 51.8 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 31/270 (11%), Positives = 73/270 (27%), Gaps = 43/270 (15%) Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + + + + + S+ F LL G++ + + QP + S +G Sbjct: 74 LRLRLQQVELRDAAGAV-RQSLPDASITLSFARLLQGQLAPLQVAVRQPAIVLERSPEGE 132 Query: 122 SNWFQRKSTMDMIHNVI---------------------------LEKIHVKGGRIKIIDQ 154 ++ L ++ + GR+ IID+ Sbjct: 133 VTLSMGRAGPPAEPPPDSGGHDDEGGAVLRDLLGRGGGDGRFGALRELSISEGRLSIIDR 192 Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214 + + + L N+ + + + + ++ G G R + P+ Sbjct: 193 QLNLTWQLERANIALRRLPEGGVG----GTGEAELVLPGHGGTLPVRLEGSARGDGPSLE 248 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274 + L P P I S ++G F + L+ Sbjct: 249 GKLVL-----PALEPARIATLLPALAPLSLFDGSAALELSGRF----DAGRDGAAPELAL 299 Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNK 304 G V + + + + + + Sbjct: 300 RLSAGPGGVTLEGRR--TGFADLQLEAEGT 327 >gi|148242023|ref|YP_001227180.1| hypothetical protein SynRCC307_0924 [Synechococcus sp. RCC307] gi|147850333|emb|CAK27827.1| Conserved hypothetical protein [Synechococcus sp. RCC307] Length = 1387 Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 16/160 (10%), Positives = 51/160 (31%), Gaps = 5/160 (3%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGL 86 D F E+Q + + + + + + + F R+ + +E L Sbjct: 29 WDAEGFHNWLEKQLSAGLNHPVELGPLLGFGLQ---GLEFGPTRVLPSASDGSQMSVERL 85 Query: 87 SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG 146 ++ + + + V + + + +++G W + + L+ + Sbjct: 86 TLLPDLISSVRQGSAVAQIGLGNLRMQLQRNAQGRL-WTFPQLAGQAPPRLRLKLQLLDA 144 Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186 + + D + L+L ++++ L + Sbjct: 145 AQFSL-DGARPWRFTGGRLDLNLASQQLRFGGAFRPKGLG 183 >gi|15597904|ref|NP_251398.1| hypothetical protein PA2708 [Pseudomonas aeruginosa PAO1] gi|107102231|ref|ZP_01366149.1| hypothetical protein PaerPA_01003283 [Pseudomonas aeruginosa PACS2] gi|116050693|ref|YP_790487.1| hypothetical protein PA14_29120 [Pseudomonas aeruginosa UCBPP-PA14] gi|218891131|ref|YP_002439997.1| hypothetical protein PLES_23961 [Pseudomonas aeruginosa LESB58] gi|313107764|ref|ZP_07793944.1| hypothetical protein PA39016_001080024 [Pseudomonas aeruginosa 39016] gi|9948783|gb|AAG06096.1|AE004699_1 hypothetical protein PA2708 [Pseudomonas aeruginosa PAO1] gi|115585914|gb|ABJ11929.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14] gi|218771356|emb|CAW27123.1| hypothetical protein PLES_23961 [Pseudomonas aeruginosa LESB58] gi|310880446|gb|EFQ39040.1| hypothetical protein PA39016_001080024 [Pseudomonas aeruginosa 39016] Length = 361 Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 37/335 (11%), Positives = 95/335 (28%), Gaps = 21/335 (6%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI--DQKEDGSFESKIEGLSMR 89 R+ + + + + + + + + + I D + + + Sbjct: 30 VRDYLNGKLADMGDYRGHIA-DVDLALWRG-AYRIDGLSIVKDNGKVPVPFLDAPSIDLS 87 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNFY-----LSSKGVSNWFQRKSTMDMIHNVILEKIHV 144 + L V + ++P LNF + + +D + + L ++ V Sbjct: 88 VSWQALWDDHAVVARVVFERPQLNFVDAGGDRDASQTGAGTDWREQLDKLLPITLNEVRV 147 Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN-FDNKRSA 203 G ++ + S L L S L ++ + EGT Sbjct: 148 VDGTLRFRNFTSKPPVNLHASALNASIYNLTNVADARGER---PARLEGTARILGQAPLE 204 Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDFSKL 260 + + + L++++ + + D G +N Sbjct: 205 VAAHFDPLSDFEDFDLRLRVTRVELKRLNDFASAYGKFDFNAGTGDLVLEAQAKRGQLDG 264 Query: 261 LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320 L + + DG+ + R ++++ T N+ K L+ + + Sbjct: 265 YIKPLLRDVDVFNWRQDVEDGDKNLFRSVWEALVGGGETVLKNQRKDQFATRVSLSGNIH 324 Query: 321 -----GAESMHDLNETDFFEEEEKKNKNDDLKKDD 350 ++ + F E + + +DD Sbjct: 325 QRDVSAFQAFLGILRNAFVEAFNARFERSPATRDD 359 >gi|152988650|ref|YP_001349339.1| hypothetical protein PSPA7_3985 [Pseudomonas aeruginosa PA7] gi|150963808|gb|ABR85833.1| hypothetical protein PSPA7_3985 [Pseudomonas aeruginosa PA7] Length = 361 Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 83/304 (27%), Gaps = 16/304 (5%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMR 89 R + + + + + + + + + I + G+ + Sbjct: 30 VRGYLNDRLANMGDYRGHIA-DVDLALWRG-AYRIDGLSIVKDNGRVPVPFLDAPGIDLS 87 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNFY-----LSSKGVSNWFQRKSTMDMIHNVILEKIHV 144 + L V + ++P LNF + + +D + + L+++ V Sbjct: 88 VSWRALWQDHAVVARVVFERPQLNFVDAGGDREASQTGAGTDWREQLDKLLPITLDEVRV 147 Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN-FDNKRSA 203 G ++ + S L L S L ++ EGT Sbjct: 148 VDGTLRFRNFGSKPPVNLRASALDASIYNLTNVADAQGQR---PAHLEGTARILGQAPLE 204 Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDFSKL 260 + + + L++++ + + D G +N Sbjct: 205 VTARFDPLSDFEDFDLRLRVTGVELKRLNDFASAYGKFDFNAGSGDLVLEAHAKRGQLDG 264 Query: 261 LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320 L + + D + + R ++++ T N+ K L+ + Sbjct: 265 YIKPLLRDVDVFNWRQDVEDSDKNLFRSVWEALVGGGETALKNQRKDQFATRVELSGNVR 324 Query: 321 GAES 324 + Sbjct: 325 QRDI 328 >gi|330503979|ref|YP_004380848.1| hypothetical protein MDS_3065 [Pseudomonas mendocina NK-01] gi|328918265|gb|AEB59096.1| hypothetical protein MDS_3065 [Pseudomonas mendocina NK-01] Length = 360 Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 39/339 (11%), Positives = 94/339 (27%), Gaps = 22/339 (6%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMR 89 R+ + + + + I + + ++ I ++ + + Sbjct: 30 IRDYLNDKLAEMGDYRGHIA-DIDLAWWRG-AYRINELTIVKETGDVPVPLLDAPLIDLS 87 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH--------NVILEK 141 + L V +++ ++P LNF G N ++ + L + Sbjct: 88 VSWPALWREHAVVAEVFFERPQLNFV---DGGDNDQATQTGAGTDWRDQLNKLLPITLNE 144 Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG-NFDNK 200 + V GRI + +D LS + S L + D + EG ++ Sbjct: 145 LRVIDGRISFHNFTTDPQVELSADKVNASLYNLTNVGDEPGDRVAH---FEGRALLLEHA 201 Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDF 257 + T + + + L+++ + D G + Sbjct: 202 PLEAEATFDPFEQFEDFELRLRAKDIDLTRFNDFARAYGRFDFKRGNGDLVIEAQAKNAQ 261 Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317 L + D + + R ++I+ S T N+ + L+ Sbjct: 262 LNGYIKPLLRDVEVFDWEQDVEDEDKGVLRSIWEAIVGGSETLLKNQRRDQFATRVELSG 321 Query: 318 SENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356 S + ++ + ++ Q N Sbjct: 322 SVHNQQTSAFQAFIAILRNGFVEAFTPRYERPPPQQDGN 360 >gi|251793725|ref|YP_003008455.1| hypothetical protein NT05HA_2054 [Aggregatibacter aphrophilus NJ8700] gi|247535122|gb|ACS98368.1| hypothetical protein NT05HA_2054 [Aggregatibacter aphrophilus NJ8700] Length = 912 Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 31/305 (10%), Positives = 86/305 (28%), Gaps = 33/305 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI--- 58 ++R L L L +++ +P +I + E A + ++ + H+ Sbjct: 1 MKRWLYALLGLIVLLVAIVCLLPWWITP----KQVENLANRFLAPDYELQLPERWHLQTT 56 Query: 59 ---LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 LP V I + + + E+ + + + Sbjct: 57 GLQLPELEVRTSQCAIATFGN-----------VHINWWEPRRLEVAHASLDYKCLN-SLP 104 Query: 116 LSSKGVSNWFQRKS--TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 S+ + + V ++ + + + ++ + ++ Sbjct: 105 SSNDNTKTPLNLTALFSAIPSAEVSIQHLQLVNSK-ELNVPPIVRQLLDPNVAATAHYDG 163 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN---FPAKNKAISLKIQLFPLAYPI 230 + + + ++I + F+ P + L + Sbjct: 164 NRLQLTANAKADDDNLILHHQSTLARENDTFRWQGQTDYQPLDGQTYHLHFSTQLKDEML 223 Query: 231 IIDLFGNLFWNEKQPIYS-----GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 + G L ++ + +S F+ G+ ++ +LS K L F + + I Sbjct: 224 QLPHQGELRFDWQNTDFSVSKGTLQFNWNGEKGQINAQDLSRNKPLLDVPFTFTSDGLAI 283 Query: 286 SRYKL 290 + Sbjct: 284 NWGTF 288 >gi|116751191|ref|YP_847878.1| membrane protein-like [Syntrophobacter fumaroxidans MPOB] gi|116700255|gb|ABK19443.1| membrane protein-like [Syntrophobacter fumaroxidans MPOB] Length = 1234 Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 87/301 (28%), Gaps = 28/301 (9%) Query: 21 FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK--DIRIDQKEDGS 78 F I RE G I + +++ LP P + + + K DG Sbjct: 27 FIASRVIGLESVREKLLTDVREQTGLHIEFR-KLELSFLPTPRLLIHSGGLTLPGKLDG- 84 Query: 79 FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI 138 ++ L + LPL GE++ + ++ P + L V + S Sbjct: 85 ---TVDTLVLVPRLLPLFKGELKADIIRLESPKFSITLPQPRVEAQPEPTSFSRRSAEKG 141 Query: 139 LE-------------KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 + I + G + D ++ ++N + + + Sbjct: 142 VRALISLLKPETHEITIRITNGSFECRDAA-GSRFWFREVNARAAMTSERLELSADCMRS 200 Query: 186 KGSVIAEGTGNFDNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN- 241 +G + + + F + L +DL L Sbjct: 201 NLWESLIVSGWMNPRDLSSSGRVILHGFSPEPLWAYLFPGAAMRFGESRLDLDATLVSEG 260 Query: 242 --EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 + + G + + +L+ K + G+F + + I +L + P ++ Sbjct: 261 PRNMRAFFQGSAPIVTLIETD-DDQLALKGGAVQGSFALEGRRLEIDLTRLDFLYPQANL 319 Query: 300 D 300 Sbjct: 320 T 320 >gi|237749229|ref|ZP_04579709.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229380591|gb|EEO30682.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 1244 Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 43/349 (12%), Positives = 96/349 (27%), Gaps = 31/349 (8%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF 79 + F+ + ++ G I ++G + S + I E Sbjct: 16 VGGLVWFVSQEWALQWIVQRVVQASGGDIEIQG---VSGTLASSFEIERISYTSPERD-- 70 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG--VSNWFQRKSTMDMIHNV 137 ++ L + LLSG++ + + + ++ SS MI V Sbjct: 71 -IEVTDLQFDWQPWQLLSGQLDIGKISASKLVIDMKKSSDEPFKMPQSLAPPVAIMISGV 129 Query: 138 ILEKIHVKGG-------RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 ++ + V G + + L +L +I L Sbjct: 130 NVDTVSVSGMGVGVELKDVHFSLTADRNGWELKNLGFDSPFGNASINVDLETT---QPFK 186 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250 GT FDN+ + K TA+ +L + Y L + S Sbjct: 187 IRGTLQFDNELA--KATASLKLGGDLNNLYVSGNLDGYDAKAKLEAVVTPFAPFVFQSVH 244 Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKIS-----DGNVRISRYKLQSILPNSSTDEDNKT 305 S G +E S +++ + ++ +S + + + + Sbjct: 245 LSAKGIDPS--RIESSWPQAQFNAEIHVTAHEDKTLKGSVSVDNSKPGPFDENYLPIHSV 302 Query: 306 KVSQDEENLLNFSENGAESMHDLNETDFFEEEE-KKNKNDDLKKDDIQY 353 K ++ D+ + F + ++ ++ Sbjct: 303 KAKIAGNVDNVLIDDVL---LDMGKAGQFAGNGQFSTEKTEVTLKTSRF 348 >gi|328544414|ref|YP_004304523.1| hypothetical protein SL003B_2796 [polymorphum gilvum SL003B-26A1] gi|326414156|gb|ADZ71219.1| hypothetical protein SL003B_2796 [Polymorphum gilvum SL003B-26A1] Length = 1450 Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 48/399 (12%), Positives = 96/399 (24%), Gaps = 53/399 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV---GKKIAVKGGIKIHI 58 LRRVL GL + + + + ER + G + V G + I Sbjct: 4 LRRVLKGLAYTALALGASVVALGALLPTPLGGIVIERIVNAALEGDGGRTTVSG---VGI 60 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL--NFYL 116 + + + + L + LL+GE V + H+ Sbjct: 61 GWTGDLRVDAVTVADAAG--PWLTLADLRLDWRPSRLLAGEAFVDTLTAGAVHVARRPVA 118 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS------------- 163 ++ G ++ R + L + I++ + L+ Sbjct: 119 AADG-NDGADRSEGSLSLPVPRLRLERLAVAEIRLAAPVAGTPLTLTASGSARIDDDPQI 177 Query: 164 -----------------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKI 206 + + + L + +G ++A D ++ Sbjct: 178 VRATLDIRRADGTAGTIGARIDFAPGDGRLGFDLDVSEPRGGLVARLMEIPDLPALDIRL 237 Query: 207 TANFPAKNKAISLKIQLFP---LAYPIIIDLFGNLFWNEKQPIYSGVFS--------VAG 255 + P + L + L + + G + G Sbjct: 238 AGDGPLDDWGADLTVALDGRQTVTGTARLGTDGAGRMLSVDLDGDLAPLAPPVAAAFLLG 297 Query: 256 DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315 L+A LSG ++ VR+ + V L+ Sbjct: 298 STELKGEARLNASFEFLSGRLSLTTQTVRLDA-DGGLDPLSQQLSGKGTLSVGAGGGALI 356 Query: 316 NFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354 +G + N L Q S Sbjct: 357 ALDIDGRRVAFGAVSAELTLSGALSKANWTLAATATQLS 395 >gi|296388825|ref|ZP_06878300.1| hypothetical protein PaerPAb_11780 [Pseudomonas aeruginosa PAb1] Length = 361 Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 86/304 (28%), Gaps = 16/304 (5%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI--DQKEDGSFESKIEGLSMR 89 R+ + + + + + + + + + I D + + + Sbjct: 30 VRDYLNGKLADMGDYRGHIA-DVDLALWRG-AYRIDGLSIVKDNGKVPVPFLDAPSIDLS 87 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNFY-----LSSKGVSNWFQRKSTMDMIHNVILEKIHV 144 + L V + ++P LNF + + +D + + L ++ V Sbjct: 88 VSWQALWDDHAVVARVVFERPQLNFVDAGGDRDASQTGAGTDWREQLDKLLPITLNEVRV 147 Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN-FDNKRSA 203 G ++ + S L L S L ++ + EGT Sbjct: 148 VDGTLRFRNFTSKPPVNLHASALNASIYNLTNVADARGER---PARLEGTARILGQAPLE 204 Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDFSKL 260 + + + L++++ + + D G +N Sbjct: 205 VAAHFDPLSDFEDFDLRLRVTRVELKRLNDFASAYGKFDFNAGTGDLVLEAQAKRGQLDG 264 Query: 261 LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320 L + + DG+ + R ++++ T N+ K L+ + + Sbjct: 265 YIKPLLRDVDVFNWRQDVEDGDKNLFRSVWEALVGGGETVLKNQRKDQFATRVSLSGNIH 324 Query: 321 GAES 324 + Sbjct: 325 QRDV 328 >gi|320108504|ref|YP_004184094.1| hypothetical protein AciPR4_3346 [Terriglobus saanensis SP1PR4] gi|319927025|gb|ADV84100.1| hypothetical protein AciPR4_3346 [Terriglobus saanensis SP1PR4] Length = 559 Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 26/282 (9%), Positives = 77/282 (27%), Gaps = 20/282 (7%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 + V G LF ++++ V ++ R+ + + + + I Sbjct: 21 KWVAGVTGGLFLLLVLAFIYVAKHLEP-ILRKRVVDTLSARFHSPVELD-ELHIGASKGF 78 Query: 63 SVFFKDIR---IDQKEDGS-----FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 V +R I D +++ + L +R+ ++ + L+ Sbjct: 79 GVTGSGLRVMYIVNTNDQGKQRVLPMLEVQEFEFHTSYKAFLRQPMRIGNVIVRGVRLHL 138 Query: 115 YLSSK------GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 ++ N ++++ +V +++I V + + + ++ D+ Sbjct: 139 PPGTQRAGPLLKQGNDKRKETNEAPKESVFVDRIFVHDAVVVMETDKPGKLPLEFDVQRV 198 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQ--LFP 225 + + P ++ + G + + + S Sbjct: 199 VLTEYARTQ-PFRYEATLVNPKPVGDIHAVGHFGPWNADDPRQTPLDGDYSFDHADMNTI 257 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA 267 + G + G V + N + Sbjct: 258 KGLGGTLSAKGKFGGVLEGITTDGEADVPDFSLDVSNHPVPL 299 >gi|254235687|ref|ZP_04929010.1| hypothetical protein PACG_01623 [Pseudomonas aeruginosa C3719] gi|126167618|gb|EAZ53129.1| hypothetical protein PACG_01623 [Pseudomonas aeruginosa C3719] Length = 361 Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 37/335 (11%), Positives = 95/335 (28%), Gaps = 21/335 (6%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI--DQKEDGSFESKIEGLSMR 89 R+ + + + + + + + + + I D + + + Sbjct: 30 VRDYLNGKLADMGDYRGHIA-DVDLALWRG-AYRIDGLSIVKDNGKVPVPFLDAPSIDLS 87 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNFY-----LSSKGVSNWFQRKSTMDMIHNVILEKIHV 144 + L V + ++P LNF + + +D + + L ++ V Sbjct: 88 VSWQALWDDHAVVARVVFERPQLNFVDAGGDRDASQTGAGTDWREQLDKLLPITLNEVRV 147 Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN-FDNKRSA 203 G ++ + S L L S L ++ + EGT Sbjct: 148 VDGTLRFRNFTSKPPVNLHASALNASIYNLTNVADARGER---PAHLEGTARILGQAPLE 204 Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDFSKL 260 + + + L++++ + + D G +N Sbjct: 205 VAAHFDPLSDFEDFDLRLRVTRVELKRLNDFASAYGKFDFNAGTGDLVLEAQAKRGQLDG 264 Query: 261 LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320 L + + DG+ + R ++++ T N+ K L+ + + Sbjct: 265 YIKPLLRDVDVFNWRQDVEDGDKNLFRSVWEALVGGGETVLKNQRKDQFATRVNLSGNIH 324 Query: 321 -----GAESMHDLNETDFFEEEEKKNKNDDLKKDD 350 ++ + F E + + +DD Sbjct: 325 QRDVSAFQAFLGILRNAFVEAFNARFERSPATRDD 359 >gi|253699718|ref|YP_003020907.1| hypothetical protein GM21_1088 [Geobacter sp. M21] gi|251774568|gb|ACT17149.1| protein of unknown function DUF490 [Geobacter sp. M21] Length = 1485 Score = 51.4 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 41/332 (12%), Positives = 106/332 (31%), Gaps = 39/332 (11%) Query: 2 LRRVLIGLGF-LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIA---VKGGIKIH 57 +RRV + LG + ++ L + + + G +++ V+G ++ Sbjct: 1 MRRVALYLGGAVLALALTVFAGLIWLVGTSSGARFALTTLDRFAGVEVSVQKVEGRLRDR 60 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 + + + + + ++E L + + L G++ V ++ + + Sbjct: 61 L------ILRGVTVSRP---RMLVRVEELRLVWDPERLSGGKLLVHELALRGVRI----- 106 Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 + + ++ + E + + + L DL+ + + + + Sbjct: 107 ---QDDTPLSEKAPELRWPQVSEVVRRIDAEVT--------RFSLKDLSYRHLQQPPSQL 155 Query: 178 SPL--SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 L S+ +G++ G G+ + ++SL ++L P + D+ Sbjct: 156 KELAASLALRQGTLTLTG-GSISASQGTASGELAAGLWRPSLSLDLRLNPS--AAVADMD 212 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 + P + +AG + A + L I+ + KL + P Sbjct: 213 AFFVQAKLSPGTAPE-QMAGP-LAIAGKRGGAPRLELESVLGITGTGFNLRNLKL--VRP 268 Query: 296 NSSTDEDNKTKVSQ-DEENLLNFSENGAESMH 326 ++ E L + AE Sbjct: 269 GRRGTLSGSASMTLTRTEPLFTLALRAAELDL 300 >gi|254226002|ref|ZP_04919602.1| conserved hypothetical protein [Vibrio cholerae V51] gi|125621458|gb|EAZ49792.1| conserved hypothetical protein [Vibrio cholerae V51] Length = 933 Score = 51.4 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59 L R+L+ L +VL A T + F+ + + ++A+ Sbjct: 8 LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113 PS+ + ++ + + + + + L L + V D+ ++ L+ Sbjct: 68 THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127 Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168 + + R +D + L+ +K I D + + L Q Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 +SI I S G+ + F ++A+ ++ ++ Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281 + L QP G N E + + SG K ++ Sbjct: 248 QTGIQKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 +++ + L+ + + + + + + Sbjct: 307 GWQVNAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 348 >gi|229589062|ref|YP_002871181.1| hypothetical protein PFLU1539 [Pseudomonas fluorescens SBW25] gi|229360928|emb|CAY47788.1| putative membrane protein [Pseudomonas fluorescens SBW25] Length = 358 Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 34/347 (9%), Positives = 91/347 (26%), Gaps = 27/347 (7%) Query: 21 FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF- 79 +P + R + + + V + + + + ++I + + Sbjct: 24 IALPYLV-----RNYLNEKLADMGDYRGQVA-DVDLALWRG-AYRINGLQIVKVDGKVPV 76 Query: 80 -ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN-- 136 K + + L V + + +P +NF G +N ++ Sbjct: 77 PFVKAPLIEFAVSWHSLWYDHAVVAEGHFVRPEINFV---DGGANKQASQTGKGTDWQEQ 133 Query: 137 ------VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + L ++ ++ G+I + S ++ ++ S L + + Sbjct: 134 LSKLLPITLNEVRIEEGKIAFHNFSSKPQVNINATDVNASFFNLTNVVDVKGKRDA---R 190 Query: 191 AEGTGNFDNK-RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPI 246 EG + T + + + + + L + D G + Sbjct: 191 FEGKALLQGQAPLEATATFDPLSDFEEFEFRFRAKDLQLKRMNDFASAYGKFDFKAGTGD 250 Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 L + + + I R ++++ S T N++K Sbjct: 251 VVIEAQAEKGQLTGYIKPLLRDVEVFDWKQDVENKDKNIFRSIWEAVVGASETVLKNQSK 310 Query: 307 VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353 L+ S + + N ++ Sbjct: 311 NQFATRVELSGSVHQQNVSAFSAFLAILRNGFIQAFNARYEQPKPSA 357 >gi|238928125|ref|ZP_04659885.1| protein of hypothetical function DUF490 [Selenomonas flueggei ATCC 43531] gi|238884085|gb|EEQ47723.1| protein of hypothetical function DUF490 [Selenomonas flueggei ATCC 43531] Length = 1444 Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 38/292 (13%), Positives = 84/292 (28%), Gaps = 19/292 (6%) Query: 36 FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95 ER +G + + G ++I L + DI I K+ + + + L L Sbjct: 39 AERIVAQRLGTDVHI-GAVEIRSLH--ELTIDDIVIYDKQ-TEEVLRADRARVTLRLLSL 94 Query: 96 LSG-EIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQ 154 L E V ++ + H++ G N+ + + +I + Sbjct: 95 LLSPETSVDEVLLTGAHVHLVRREDGSWNYADLVADDAEPSTF-VGRIRIADS--AADVD 151 Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG--TGNFDNKRSAFKITANFPA 212 Y L+DL+ S + + + A G T + + + A P Sbjct: 152 ADGHSYVLTDLSGAADIDRGAFSYDASAEFMGIPLRARGEKTSDVQDVQFAADDADLTPL 211 Query: 213 KNKAISLKIQLFPLAYPIIID-LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR 271 + + + D + L + G + L + + Sbjct: 212 LSLLPETVLPERVKISTLHADRVRTRLRLVDGARTMEGRIDGVRADADLYGTQTTLT--- 268 Query: 272 LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 S + + V ++ + + D ++ D L+ + Sbjct: 269 -SAALRFDERTVFVAA---TATAAEQTARVDGTVQMDTD-APYLDLRVRAND 315 >gi|289165643|ref|YP_003455781.1| hypothetical protein LLO_2318 [Legionella longbeachae NSW150] gi|288858816|emb|CBJ12730.1| hypothetical protein LLO_2318 [Legionella longbeachae NSW150] Length = 1329 Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 92/304 (30%), Gaps = 27/304 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RV + L + V + W ++ + E+ +L++G+ + ++ Sbjct: 13 KRVWMYLAVFIIFMAVFSSIFRALTPWAKEYKGEIEQHLSLLLGQPVTIQTIETGWYWFH 72 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG 120 P + + + +D + + L + L + +I+ +YID HLN Sbjct: 73 PVLKLNQVTLG--DDSNKNFHVNKLLVGINLFKSLWNWQIQPGVLYIDDMHLNL-REKDA 129 Query: 121 VS------------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 + K+ +I E++ +K + + + LN+ Sbjct: 130 HWTIDGITTNALNSDMTPEKTKQILIWLSQQERLIIKHVSAYFYFSDGG-LIPVDGLNVS 188 Query: 169 ISARFLNIISPLS---IDSIKGSVIAEGTGNFDNKRS-AFKITANFPAKNKAISLKIQLF 224 ++ + + G G FD+ K F AKN + LF Sbjct: 189 VANSGGHYKFKGGARLAQTNSTDFQLLGDGYFDSDHFEEIKGRFYFSAKNIVPAQWQSLF 248 Query: 225 PLAYPIIIDLFGNLFWNEKQP-----IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 P A + GN+ +LL + S N Sbjct: 249 PQATEHLEGGKGNIALWVDMRHGSITSVQAQVDFKRLAWRLLRNQQSQLVQSFFANLSWK 308 Query: 280 DGNV 283 NV Sbjct: 309 PDNV 312 >gi|254291324|ref|ZP_04962118.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|150422780|gb|EDN14733.1| conserved hypothetical protein [Vibrio cholerae AM-19226] Length = 1291 Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59 L R+L+ L +VL A T + F+ + + ++A+ Sbjct: 8 LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113 PS+ + ++ + + + + + L L + V D+ ++ L+ Sbjct: 68 THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127 Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168 + + R +D + L+ +K I D + + L Q Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 +SI I S G+ + F ++A+ ++ ++ Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281 + L QP G N E + + SG K ++ Sbjct: 248 QTGIQKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 R++ + L+ + + + + + + Sbjct: 307 GWRVNAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 348 >gi|262276891|ref|ZP_06054684.1| hypothetical protein HIMB114_0293 [alpha proteobacterium HIMB114] gi|262223994|gb|EEY74453.1| hypothetical protein HIMB114_0293 [alpha proteobacterium HIMB114] Length = 456 Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 54/386 (13%), Positives = 123/386 (31%), Gaps = 30/386 (7%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWT-DFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++LI + + P I++ D + E + ++ K+ +KG I+ + P Sbjct: 7 KKLLISI-LFLVFSVTAYVCSPFLINFNYDKKTGIENLISELILYKVNIKGNIQYKLYPL 65 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 PS+ ++ I E+ S + + + LL + ++ I+ L++ Sbjct: 66 PSLEISEVHITNDEENS---ILNKIVLNVSIFDLLKNKFSYKNILINSGEFIINLNN--- 119 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + I +KI+ + IK D + N+ + ++ Sbjct: 120 ------LEVLSSIEEFDNKKINFEKVNIKFFDNKHSFSINEFSGNILYKNKKID-KINGK 172 Query: 182 IDSIKGSVIAEGT---GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 + + + + FK + K + +P + +F + Sbjct: 173 FYVGEILFKIKFKENQLSLKSPEINFKASIENFLNPKKLIKLDYNNSSIFPGVDSIFASF 232 Query: 239 FWNEKQPIYSG---VFSVAGDF-SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 + + + +S F +N L G F+ S +IS L + L Sbjct: 233 TYEQNKNKFSLITKEFETNIFSGLININNNNDKNIIVLDGYFEDSKFK-KISNTDLATFL 291 Query: 295 PNS----STDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKK---NKNDDLK 347 + + D + K+S + + D F E+ N ++K Sbjct: 292 SQNLNLLANLFDGRVKLSFNNFKSDKEIFENIKFNVLFQNGDVFFEDINIYSDNNTINIK 351 Query: 348 KDDIQYSVNKKEEKDNSHDKENQENF 373 ++ Y + D +N + Sbjct: 352 GRNVTYQKDNLFFYDVIFSTKNLKRL 377 >gi|148244387|ref|YP_001219081.1| hypothetical protein COSY_0227 [Candidatus Vesicomyosocius okutanii HA] gi|146326214|dbj|BAF61357.1| hypothetical protein [Candidatus Vesicomyosocius okutanii HA] Length = 824 Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 91/310 (29%), Gaps = 24/310 (7%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFP 62 V + + +++V T P+ + E Q + + G + + I + Sbjct: 19 WVSVIFSLIIVLIVVLFVTFPIL-----LKAPIENQLSSLTGLDVRLS-KITFYFENIGI 72 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 ++ DI I ++ + I+ LS L L +YID L + ++ Sbjct: 73 ALQVHDIAILSNKNQQKVAIIKKLSWHVNLLNLFDNIYHSSKIYIDTLMLFSNSGNVNIN 132 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGR---------IKIIDQESDQVYFLSDLNLQISARF 173 N S + E +HV + + + + +L Sbjct: 133 NINNIVSLDMLEKLYFFESLHVNKIIIKHAIKITPLTLKRDGVQFLLTIPRQDLVTKYFN 192 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-------PL 226 + S G + T ++ + + + I + + Sbjct: 193 VTFSLSNVQVSRDGCLTLPITVINNDFKLVLGLKLYNQKNDDFIQITGLIKRMNVVKISD 252 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 P+++ W ++ SG K + K +++ + ++ Sbjct: 253 YLPVVLIGSATYQWIKQAFQ-SGTIDNINIDIKKNLSKELPAKIKINAHLTNTELLFNAD 311 Query: 287 RYKLQSILPN 296 + L+ + N Sbjct: 312 WHNLKQLDAN 321 >gi|153825623|ref|ZP_01978290.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|149740653|gb|EDM54760.1| conserved hypothetical protein [Vibrio cholerae MZO-2] Length = 1291 Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59 L R+L+ L +VL A T + F+ + + ++A+ Sbjct: 8 LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113 PS+ + ++ + + + + + L L + V D+ ++ L+ Sbjct: 68 THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127 Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168 + + R +D + L+ +K I D + + L Q Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 +SI I S G+ + F ++A+ ++ ++ Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281 + L QP G N E + + SG K ++ Sbjct: 248 QTGIQKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 +++ + L+ + + + + + + Sbjct: 307 GWQVNAHSLR-LRSDDELWPLLDVAMDWHPD-EWRLNLSQLNIE 348 >gi|120602703|ref|YP_967103.1| AsmA family protein [Desulfovibrio vulgaris DP4] gi|120562932|gb|ABM28676.1| AsmA family protein [Desulfovibrio vulgaris DP4] Length = 1191 Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 31/264 (11%), Positives = 73/264 (27%), Gaps = 14/264 (5%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE---DGSFE 80 P + E+ G + +GG+ +LP P+V +D+ E + + Sbjct: 26 PRLVSPERLAEEVRALVRERTGVVLDSRGGVTFSLLPHPAVILRDVTATVPESMFGNAAK 85 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILE 140 + R + LL G + + + ++ + F D + + + Sbjct: 86 GHASVIVCRPSWRSLLEGRLLLAGLELEDAVIEFE-----------MALATDGLVSGTVA 134 Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200 + + + Q + + S L+ GS A G + + Sbjct: 135 GSAYREASETMRRAPAPQGGTGGNGIAVATPVSPAGDSVLNAPDSPGSPEAPGVPVWRDL 194 Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL 260 I + ++ + + + S G Sbjct: 195 PVGVAAFLLRDLPCDFIRITRGRIVVSDAVADGIDFVFRRAGAAAHLNLQVSRVGQSVVS 254 Query: 261 LNLELSAKKSRLSGNFKISDGNVR 284 + + + +SG S G ++ Sbjct: 255 PDAGFAVPGAAVSGEAASSGGVLQ 278 >gi|297580558|ref|ZP_06942484.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297534974|gb|EFH73809.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 1291 Score = 50.7 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59 L R+L+ L +VL A T + F+ + + ++A+ Sbjct: 8 LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113 PS+ + ++ + + + + + L L + V D+ ++ L+ Sbjct: 68 THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127 Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168 + + R +D + L+ +K I D + + L Q Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 +SI I S G+ + F ++A+ ++ ++ Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281 + L QP G N E + + SG K ++ Sbjct: 248 QTGIQKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 +++ + L+ + + + + + + Sbjct: 307 GWQVNAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 348 >gi|153802108|ref|ZP_01956694.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|124122352|gb|EAY41095.1| conserved hypothetical protein [Vibrio cholerae MZO-3] Length = 1291 Score = 50.7 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59 L R+L+ L +VL A T + F+ + + ++A+ Sbjct: 8 LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113 PS+ + ++ + + + + + L L + V D+ ++ L+ Sbjct: 68 THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127 Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168 + + R +D + L+ +K I D + + L Q Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 +SI I S G+ + F ++A+ ++ ++ Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281 + L QP G N E + + SG K ++ Sbjct: 248 QTGIQKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 +++ + L+ + + + + + + Sbjct: 307 GWQVNAHSLR-LRSDDELWPLLDVAMDWHPD-EWRLNLSQLNIE 348 >gi|121590783|ref|ZP_01678112.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121547385|gb|EAX57499.1| conserved hypothetical protein [Vibrio cholerae 2740-80] Length = 1291 Score = 50.7 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 101/344 (29%), Gaps = 23/344 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59 L R+L+ L +VL A T + F+ + + ++A+ Sbjct: 8 LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113 PS+ + ++ + + + + + L L + V D+ ++ L+ Sbjct: 68 THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127 Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168 + + R +D + L+ +K I D + + L Q Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 +SI I S G+ + F ++A+ ++ ++ Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281 + L + QP G N E + + SG K ++ Sbjct: 248 QTGIQKGQVSLNAWATFEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 +++ + L+ + + + + + + Sbjct: 307 GWQVNAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 348 >gi|15640447|ref|NP_230074.1| hypothetical protein VC0420 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121727241|ref|ZP_01680400.1| conserved hypothetical protein [Vibrio cholerae V52] gi|147673677|ref|YP_001218689.1| hypothetical protein VC0395_A2839 [Vibrio cholerae O395] gi|153822579|ref|ZP_01975246.1| conserved hypothetical protein [Vibrio cholerae B33] gi|227080631|ref|YP_002809182.1| hypothetical protein VCM66_0405 [Vibrio cholerae M66-2] gi|254850652|ref|ZP_05240002.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|298501047|ref|ZP_07010848.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9654842|gb|AAF93593.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121630360|gb|EAX62755.1| conserved hypothetical protein [Vibrio cholerae V52] gi|126519883|gb|EAZ77106.1| conserved hypothetical protein [Vibrio cholerae B33] gi|146315560|gb|ABQ20099.1| conserved hypothetical protein [Vibrio cholerae O395] gi|227008519|gb|ACP04731.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|227012274|gb|ACP08484.1| conserved hypothetical protein [Vibrio cholerae O395] gi|254846357|gb|EET24771.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|297540295|gb|EFH76355.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 1291 Score = 50.7 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59 L R+L+ L +VL A T + F+ + + ++A+ Sbjct: 8 LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113 PS+ + ++ + + + + + L L + V D+ ++ L+ Sbjct: 68 THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127 Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168 + + R +D + L+ +K I D + + L Q Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 +SI I S G+ + F ++A+ ++ ++ Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281 + L QP G N E + + SG K ++ Sbjct: 248 QTGIQKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 +++ + L+ + + + + + + Sbjct: 307 GWQVNAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 348 >gi|153830404|ref|ZP_01983071.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|148874106|gb|EDL72241.1| conserved hypothetical protein [Vibrio cholerae 623-39] Length = 1291 Score = 50.7 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59 L R+L+ L +VL A T + F+ + + ++A+ Sbjct: 8 LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113 PS+ + ++ + + + + + L L + V D+ ++ L+ Sbjct: 68 THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127 Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168 + + R +D + L+ +K I D + + L Q Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 +SI I S G+ + F ++A+ ++ ++ Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281 + L QP G N E + + SG K ++ Sbjct: 248 QTGIQKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 +++ + L+ + + + + + + Sbjct: 307 GWQVNAHSLR-LRSDDELWPLLDVAMDWHPD-EWRLNLSQLNIE 348 >gi|153217099|ref|ZP_01950863.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124113879|gb|EAY32699.1| conserved hypothetical protein [Vibrio cholerae 1587] Length = 1291 Score = 50.7 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59 L R+L+ L +VL A T + F+ + + ++A+ Sbjct: 8 LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113 PS+ + ++ + + + + + L L + V D+ ++ L+ Sbjct: 68 THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127 Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168 + + R +D + L+ +K I D + + L Q Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 +SI I S G+ + F ++A+ ++ ++ Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281 + L QP G N E + + SG K ++ Sbjct: 248 QTGIQKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 +++ + L+ + + + + + + Sbjct: 307 GWQVNAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 348 >gi|167751914|ref|ZP_02424041.1| hypothetical protein ALIPUT_00156 [Alistipes putredinis DSM 17216] gi|167660155|gb|EDS04285.1| hypothetical protein ALIPUT_00156 [Alistipes putredinis DSM 17216] Length = 1536 Score = 50.7 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 41/131 (31%), Gaps = 12/131 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--------TDFREDFERQATLIVGKKIAVKGG 53 +RR++ L + S +++ +PL + + + +G +I++ Sbjct: 1 MRRIVNILAKMVSAIVLALIFLPLLVALLFEIPAAQNFVAREATEIISRKLGTRISID-- 58 Query: 54 IKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113 ++ I F V + + L R + L L G + + Sbjct: 59 -RVDIGLFYRVSLDGFYV-EDFQRDTLLYAGRLDARIKSLGLFGGGLVFSRAELSDARFC 116 Query: 114 FYLSSKGVSNW 124 + G N Sbjct: 117 LRETPDGEMNI 127 >gi|153818251|ref|ZP_01970918.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|126511210|gb|EAZ73804.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] Length = 1291 Score = 50.7 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59 L R+L+ L +VL A T + F+ + + ++A+ Sbjct: 8 LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113 PS+ + ++ + + + + + L L + V D+ ++ L+ Sbjct: 68 THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127 Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168 + + R +D + L+ +K I D + + L Q Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187 Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 +SI I S G+ + F ++A+ ++ ++ Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281 + L QP G N E + + SG K ++ Sbjct: 248 QTGIQKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 +++ + L+ + + + + + + Sbjct: 307 GWQVNAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 348 >gi|115373652|ref|ZP_01460947.1| hypothetical protein STIAU_5844 [Stigmatella aurantiaca DW4/3-1] gi|310824957|ref|YP_003957315.1| hypothetical protein STAUR_7733 [Stigmatella aurantiaca DW4/3-1] gi|115369355|gb|EAU68295.1| hypothetical protein STIAU_5844 [Stigmatella aurantiaca DW4/3-1] gi|309398029|gb|ADO75488.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 1228 Score = 50.7 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 21/272 (7%), Positives = 58/272 (21%), Gaps = 29/272 (10%) Query: 31 DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG----SFESKIEGL 86 + Q G ++ + I + + + + ++ L Sbjct: 46 WLKPRIVSQVEAATGLQLDYQ---TARIAVLSGLRLEGLVVRTPSPFQGVAPDLLRVGSL 102 Query: 87 SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG 146 ++ F LLS RV + L G++++ + + Sbjct: 103 EVQWSFGALLSKSPRVERVTARDVALALVADEAGLTSFSGLMGPAAPEPPPVKPPLGASQ 162 Query: 147 GRIKI-----------IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195 I S + + + + T Sbjct: 163 QVAAFLASAPPFGKAEISGVSLSFTRVRSGEVLERWSLGGLAVTVEAKHQDDGWKLLATT 222 Query: 196 NFDNKRSAFKI-----TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250 ++ + + + A +DL + + Sbjct: 223 GQTGAPLPVELVREGSAHPPAQASLELIFSAEAGASAARTRVDLDIA------RQTFDPQ 276 Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 F+V + +K ++ + Sbjct: 277 FTVRSLLHGTASARFDGEKRHITIELDRTQLT 308 >gi|70728896|ref|YP_258645.1| hypothetical protein PFL_1518 [Pseudomonas fluorescens Pf-5] gi|68343195|gb|AAY90801.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5] Length = 358 Score = 50.7 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 35/346 (10%), Positives = 89/346 (25%), Gaps = 27/346 (7%) Query: 21 FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF- 79 +P + R+ + + + + I + + + + I + Sbjct: 24 IALPYLV-----RDYLNDKLADMGDYRGRIS-DIDLALWRG-AYRINGLEIVKVSGKVPV 76 Query: 80 -ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH--- 135 K + + + L V + QP LNF G ++ ++ Sbjct: 77 PFVKAPLIDLSVSWHSLWYDHAVVAKVQFIQPELNFV---DGGADKQASQTGEGTDWRAQ 133 Query: 136 -----NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + L+++ + G+I + S + + S L + Sbjct: 134 LGKLLPITLDELRIDDGKIHFHNFSSKPPVNIGATQVNASFYNLTNVVDTQGKRDA---R 190 Query: 191 AEGTGNFDNK-RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPI 246 +G + T + + + +++ + D G +N Sbjct: 191 FDGKALLQGQAPMESTATFDPLSNFENFEFRLRARDIELKRFNDFASAYGKFDFNAGHGD 250 Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 L + + + N I R ++++ S T N+ K Sbjct: 251 VVIEAQAEKGQLHGYIKPLLRDVEVFNWQQDVENRNKSIFRSVWEALVGASETLLKNQRK 310 Query: 307 VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 L+ S + + + N ++ Sbjct: 311 NQFATRVELSGSVHQQDISAFQAFLQILRNGFIQALNARYEQPKPS 356 >gi|307544505|ref|YP_003896984.1| hypothetical protein HELO_1915 [Halomonas elongata DSM 2581] gi|307216529|emb|CBV41799.1| hypothetical protein HELO_1915 [Halomonas elongata DSM 2581] Length = 1292 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 26/252 (10%), Positives = 64/252 (25%), Gaps = 10/252 (3%) Query: 30 TDFREDFERQATLIVGKKIAVK---GGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGL 86 E ++++ GG+ + P+ + D + ++E Sbjct: 37 DRLSPQLESMLASRFSAEVSLNEARGGVD-GLDPWFEIADLDFHSRKGLGNVPLLEVEQA 95 Query: 87 SMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVK 145 +R + L G + ++ L+ Y W + + Sbjct: 96 KLRLDTAASLRRGMPVLERSRLEGVTLHLYQDEDLSWQWPAPADVPPELMPPGGFDLSRL 155 Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK 205 I ++ ++ + + + L + S G EG + + Sbjct: 156 DFWIGVLLRQRAWADDMRVVLHGRKRVAVLHAPRLLMTSDNGRAHLEGEVRLQGQPGSAF 215 Query: 206 ITANFPAKNKAISLKIQLFPL-AYPIIIDLFGNLFWNE----KQPIYSGVFSVAGDFSKL 260 ++ L +I L L +++ +L Sbjct: 216 QAVMELRRDTGNGFDADLQADMQLESLIGLSALLGFDDILRFDDASGEARLWGNWQDGRL 275 Query: 261 LNLELSAKKSRL 272 ++ L RL Sbjct: 276 ADVRLDVTSPRL 287 >gi|332298217|ref|YP_004440139.1| protein of unknown function DUF490 [Treponema brennaborense DSM 12168] gi|332181320|gb|AEE17008.1| protein of unknown function DUF490 [Treponema brennaborense DSM 12168] Length = 1489 Score = 50.3 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 87/297 (29%), Gaps = 31/297 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW---------TDFREDFERQATLIVGKKIAVKG 52 ++ ++ + + + FT + + TD+R R G +++ Sbjct: 1 MKSQIVKISISSVLFIALLFTALILVRPLCVAFERQLTDYRTTALRLLEEKTGLRLSYA- 59 Query: 53 GIKIHILPFP--SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID-- 108 I P + K + E G +I+ + + LL G + Sbjct: 60 ----SISPSILSAFKIKGVAFYDAETGVPVLEIDRAVLSYKIGALLRGRFDTAFTKLTVN 115 Query: 109 ------QPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 +N+ + K ++ R T V+ ++ I + + Sbjct: 116 GIALEYDAMINYRIIEKLLALVSSRTETETQQSPVVSGAFNL---SIPFDIEVKNISLHY 172 Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN-FDNKRSAFKITANFPAKNKAISLKI 221 SD ++ F + SV + + K+ A + +S Sbjct: 173 SDASVDARVVFKSADIKSMQQGSLLSVSVNAKASAVLSAALLAKLPAKVASALGPVSASF 232 Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278 Q P DL G+ + + SG +S+A + S K + + Sbjct: 233 QFDAAVTP---DLDGSSAKIKVLSLNSGSYSLARTGLFAEYKDGSVKLASMQNALPF 286 >gi|262172488|ref|ZP_06040166.1| possible exported protein [Vibrio mimicus MB-451] gi|261893564|gb|EEY39550.1| possible exported protein [Vibrio mimicus MB-451] Length = 1280 Score = 50.3 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 37/340 (10%), Positives = 99/340 (29%), Gaps = 23/340 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 +L+ L + ++ + G + + F+ + + ++A+ PS Sbjct: 2 WLLVSLLIVLALAVTGLRILLPQM--NRFQAEIQHWLNQNSSVQVAIADVKGYWRNTHPS 59 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN--------F 114 + + ++ + + + + + L L + + D+ I+ L+ Sbjct: 60 LSLQALQAHWPDSNDIQLNAASIEIEFDLLQSLWERQPVIADLTINGMVLDLRAIDWLAL 119 Query: 115 YLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172 + + R +D + L+ +K I D + + L Q S + Sbjct: 120 EQNPNPRQSRQGRVVQQLDDLLLRQLDDFTLKNSAILYRTFVGDMRQLDIEKLRWQNSGQ 179 Query: 173 FLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 +SI S G+ + F ++A+ ++ ++ Sbjct: 180 RHFTEGVVSIAGTNINSLLVSANFMDHGSLRDVSGDFYVSADKVRVLPWLTRYLKDQTGI 239 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285 + QP G + N E + + SG K + ++ Sbjct: 240 QKGQLSFNAWATLEHNQP-IDGYVELKPSELVWQNGEQNHELLLESGIVELKPTKQGWQV 298 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 + + L+ + + + N + + Sbjct: 299 NAHSLR-LRSDDVLWPLLDVAMDWQP-NEWRLNLSQLNID 336 >gi|220917007|ref|YP_002492311.1| AsmA [Anaeromyxobacter dehalogenans 2CP-1] gi|219954861|gb|ACL65245.1| AsmA [Anaeromyxobacter dehalogenans 2CP-1] Length = 879 Score = 50.3 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 27/269 (10%), Positives = 72/269 (26%), Gaps = 31/269 (11%) Query: 38 RQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS 97 + + +G+ +AV+ + + + + +E + + L Sbjct: 44 DRLSQQLGRPVAVESVKTRLLGGVGVRVAGVSVGAGEGEDRPLATLERAEVEVNLIGALL 103 Query: 98 ---GEIRVFDMYIDQPHLNFYLSSKGVSNWF-------------------QRKSTMDMIH 135 + V + +D +N G +N + + Sbjct: 104 SGGKRVTVREAVVDGLRVNVIRFPDGTTNVERVAKRLEETSAKEPAAEAPAGEQKPADLS 163 Query: 136 NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195 V +++ V+ RI +D+ L +L + R L PL + + Sbjct: 164 AVRVDRAAVENARIAFLDRSVKGAEELYVDDLDVEVRDLRAGRPLEVVLKAAVLAKVQNL 223 Query: 196 NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255 K + T + + ++ P + G + + + Sbjct: 224 ELRVKAAPLPPTLVPTPEQVTLKVQPIDLGPLAPF---VPGEAGFRGGRFQADLAVVLGA 280 Query: 256 DFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + ++ + G F+ Sbjct: 281 A------VPGGSGRTTVKGGFRADQLAFA 303 >gi|262164136|ref|ZP_06031875.1| possible exported protein [Vibrio mimicus VM223] gi|262027664|gb|EEY46330.1| possible exported protein [Vibrio mimicus VM223] Length = 1280 Score = 50.3 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 37/340 (10%), Positives = 99/340 (29%), Gaps = 23/340 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 +L+ L + ++ + G + + F+ + + ++A+ PS Sbjct: 2 WLLVSLLIVLALAVTGLRILLPQM--NRFQAEIQHWLNQNSSVQVAIADVKGYWRNTHPS 59 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN--------F 114 + + ++ + + + + + L L + + D+ I+ L+ Sbjct: 60 LSLQALQAHWPDSNDIQLNAASIEIEFDLLQSLWERQPVIADLTINGMVLDLRAIDWLAL 119 Query: 115 YLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172 + + R +D + L+ +K I D + + L Q S + Sbjct: 120 EQNPNPRQSRQGRVVQQLDDLLLRQLDDFTLKNSAILYRTFVGDMRQLDIEKLRWQNSGQ 179 Query: 173 FLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 +SI S G+ + F ++A+ ++ ++ Sbjct: 180 RHFTEGVVSIAGTNINSLLVSANFMDHGSLRDVSGDFYVSADKVRVLPWLTRYLKDQTGI 239 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285 + QP G + N E + + SG K + ++ Sbjct: 240 QKGQLSFNAWATLEHNQP-IDGYVELKPSELVWQNGEQNHELLLESGIVELKPTKQGWQV 298 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 + + L+ + + + N + + Sbjct: 299 NAHSLR-LRSDDVLWPLLDVAMDWQP-NEWRLNLSQLNID 336 >gi|118602273|ref|YP_903488.1| membrane protein-like [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567212|gb|ABL02017.1| membrane protein-like protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 821 Score = 50.3 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 39/318 (12%), Positives = 91/318 (28%), Gaps = 27/318 (8%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-P 62 V + F+F +V++ P+ + E Q + + G + + I Sbjct: 18 WVSVIFTFIFVLVVLFFVIFPML-----LKVPIETQLSSLTGLDVQLS-KITFDFEKKGI 71 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS---K 119 ++ DI I E + I+ LS L L ++ID L L Sbjct: 72 TLKVHDISIASGEAQQ-MAMIKNLSWHINLLSLFDDIYHSSQIFIDTLVLYSNLDDFSID 130 Query: 120 GVSNWFQRKSTMD--MIHNVILEKIHVKG----GRIKIIDQESDQVYFLSDLNLQISARF 173 + N + ++ + K +K + + + + + ++ Sbjct: 131 DIRNIASLGMLKELYFFESLHINKTIIKDTVEIASLTLKRDGMQLLLTIPNQSIGTKHLD 190 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA-------KNKAISLKIQLFPL 226 + II + + G + T + D+ + + + Sbjct: 191 ITIILSSAKINQNGFLTLPITLSGDDFELLSSLKIYSYQGYDFIQFSGLIQRMNVINISD 250 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 P+++ N W + SG K K + + ++ Sbjct: 251 YLPMVLIGDINHQWIKHAFQ-SGELDNINISIKKNLSTQLPAKIKFDAHLSNTELLFNTD 309 Query: 287 RYKLQSILPNSSTDEDNK 304 L+ +++ D + Sbjct: 310 WQSLK--QLDANIAIDGR 325 >gi|227494710|ref|ZP_03925026.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436] gi|226831790|gb|EEH64173.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436] Length = 77 Score = 49.9 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 2/77 (2%) Query: 58 ILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 +P+P V +DI + D + + L LL+ + + + +++P Sbjct: 1 WVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEKPDARLI 60 Query: 116 LSSKGVSNWFQRKSTMD 132 S+ +NW + D Sbjct: 61 RLSEKNNNWTFNLANDD 77 >gi|84515553|ref|ZP_01002915.1| hypothetical protein SKA53_02806 [Loktanella vestfoldensis SKA53] gi|84510836|gb|EAQ07291.1| hypothetical protein SKA53_02806 [Loktanella vestfoldensis SKA53] Length = 1110 Score = 49.9 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 43/374 (11%), Positives = 94/374 (25%), Gaps = 45/374 (12%) Query: 2 LRRVLIGLGFLFSV----VLVGAFTVPLFID-----WTDFREDFERQATLIV-GKKIAVK 51 L RV + L + V ++ + ID + + + T ++ G ++ Sbjct: 30 LSRVRLVLRGVLLVCLMPLVFALVAGVMIIDREITAPSWITAQVQDRGTEVLDGGRLRFA 89 Query: 52 GGIKIHILPF--PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYID 108 I + I P++ D ++ + ++I + +L + V + I Sbjct: 90 -AISVRIGRDLHPTIRLIDTQLIDRNGAL-VTRIPVVEADLSPRGVILQRAVLVQQVRII 147 Query: 109 QPHLNFYLSSKGVSNWFQRKSTMDMIHNV-----------------ILEKIHVKGGRIKI 151 +N + G ++ L V G + Sbjct: 148 GAQINLRRARDGSLGLALGAGNQLRTRSLPEWLDEIDLFLDRPVFDALRTAQVSGLIVNY 207 Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI-----AEGTGNFDNKRSAFKI 206 D + + + + + + R + + + G D++ + + Sbjct: 208 DDARARRNWTVDGGQVDLDMRGGQLTVQAELALLSGRADVTTALLSYASPRDSRAADLAV 267 Query: 207 TANFPAKNKAISLKIQLFPL---AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL 263 T N A + + L L A P+ L L + + Sbjct: 268 TINNIAASDIAAQSPALNWLRDVAAPLSATLRTTLDETGALGALRASLDIGAGVLQPTPA 327 Query: 264 ELSAKKSRLSGNFKISD--GNVRISRYKLQSILPNSSTDEDNKTKV-SQDEENLLNFSEN 320 S +R S +Q S + + Sbjct: 328 SDPVGFSAARAELTYDPTLDLIRFSDIAVQ--SEWGSLQASGDAYLRDFADGLPRALLAQ 385 Query: 321 GAESMHDLNETDFF 334 LN F Sbjct: 386 FQLRDVALNPPGLF 399 >gi|238751398|ref|ZP_04612891.1| hypothetical protein yrohd0001_15850 [Yersinia rohdei ATCC 43380] gi|238710456|gb|EEQ02681.1| hypothetical protein yrohd0001_15850 [Yersinia rohdei ATCC 43380] Length = 1267 Score = 49.9 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 99/319 (31%), Gaps = 37/319 (11%) Query: 14 SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRID 72 ++++ G + I D+R + + G + V G ++ F P++ +DI Sbjct: 2 ALLVSGLRMMLPLI--NDYRPQIVAKVQSLSGIPLEV-GFMQGTWETFGPTLELRDIGAQ 58 Query: 73 QKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF--YLSSKGVSNWFQRKS 129 + +++ +++ + LL + DM Q L+ L+ + S+ S Sbjct: 59 LPQAD---LQVQRVTLALDVWQSLLHWRWQFRDMTFYQLQLDLNTTLARQPGSDSSLETS 115 Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSIDSIKGS 188 + I L+ ++ RI + + + L S +S+ +I G Sbjct: 116 QITDIFLRQLDHFDLRNSRISFLTPSGPRAELEIPQLTWLNSLSRHRAEGQISLSTINGQ 175 Query: 189 V-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID--LFGNLFWNEKQP 245 + + + + + +Q + I L N + + Sbjct: 176 HGVVMVRMDLHDNQGILNYGT----------VYMQADNIDVKPWISRWLHNNTGLDSAEF 225 Query: 246 IYSGVFSVAGDFSKLLNLELSAK-KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 S+ G N+ LS + G+ + + + L+ + D Sbjct: 226 SLEAWLSIKGGEVYSGNMLLSQGQANWTVGD---QPHQLAVDNFVLEGHRQGTGWQID-- 280 Query: 305 TKVSQDEENLLNFSENGAE 323 L +G Sbjct: 281 -------APELRLKTDGQS 292 >gi|59710984|ref|YP_203760.1| membrane protein, transporter [Vibrio fischeri ES114] gi|59479085|gb|AAW84872.1| conserved membrane protein, predicted transporter [Vibrio fischeri ES114] Length = 1277 Score = 49.9 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 28/242 (11%), Positives = 73/242 (30%), Gaps = 21/242 (8%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKI 83 ++ + E + G I++ G +K PS+ + + G + Sbjct: 21 FLPTLNQYQPEIETFLSETTGFSISI-GEVKGRWRNTNPSLNLRKLTAVDPSTGDEIISV 79 Query: 84 EGLSMRAE-FLPLLSGEIRVFDMYIDQPHLNF------------YLSSKGVSNWFQRKST 130 + ++ L + + D+ ID+ + + + Sbjct: 80 GAVEIQLNILSSLWAQRPQFADLRIDKLTADLTSLGPSSLGKSEEDAKAEQESDESLAKR 139 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSIDSIKGS- 188 ++ + V L +K ++ + + + + L + R +S+ + + Sbjct: 140 LEDLFLVRLNHFSIKSSQVAFMALDGKEKTIQIDSLQWRNERRKHLAEGIVSVIGSEINQ 199 Query: 189 ----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 + G+F + F + A I+ IQ + + + + Q Sbjct: 200 LKVIANFKEKGSFKSLDGHFYVEAKNIQVTPWITESIQKEYGITQGEVSVNAWFSFKDGQ 259 Query: 245 PI 246 PI Sbjct: 260 PI 261 >gi|116623055|ref|YP_825211.1| hypothetical protein Acid_3959 [Candidatus Solibacter usitatus Ellin6076] gi|116226217|gb|ABJ84926.1| conserved hypothetical protein [Candidatus Solibacter usitatus Ellin6076] Length = 525 Score = 49.5 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 83/306 (27%), Gaps = 41/306 (13%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQA----TLIVGKKIAVKG------ 52 ++ L G+G V L+G + ++ F+ +QA + + G Sbjct: 5 KKWLAGIGLAAGVALIGLTIAGIVLNR-RFQPYLRQQAILYLRERFHSDVELSGLHVSLP 63 Query: 53 ---GIKIHI----LPFPSVFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVF 103 ++ + V + + + D I S + L V Sbjct: 64 RLSPLRWALTRGRGTQLWVDGYGLVLRHKGRADLPPMFAIRKFSFAVDPGSLFEKTKVVP 123 Query: 104 DMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH---NVILEKIHVKGGRIKI---IDQESD 157 + ++ LN S+ V+L+++ ++ + + Sbjct: 124 VVEVEGLELNLP-PKDERPALSANPSSAAEEEGKTGVLLQEVRIRDAEFVMLPRDRAKKP 182 Query: 158 QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217 + + LNL + + + + + + G F ++ P + + Sbjct: 183 LRFAIHQLNLHSAGTGVPMKYDARLTNPTPPGEIQSKGIFGP------WNSDEPG-DTPL 235 Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV----AGDFSKLLNLELSAKKSRLS 273 S + + G + G L+ S + L Sbjct: 236 SGDYRFDHADLGV---FHGVAGILSSTGRFEGELDTITARGEATVPDFRLKRSGNRVPLK 292 Query: 274 GNFKIS 279 F++ Sbjct: 293 AQFEVQ 298 >gi|46579826|ref|YP_010634.1| AsmA family protein [Desulfovibrio vulgaris str. Hildenborough] gi|46449241|gb|AAS95893.1| AsmA family protein [Desulfovibrio vulgaris str. Hildenborough] gi|311234167|gb|ADP87021.1| hypothetical protein Deval_1870 [Desulfovibrio vulgaris RCH1] Length = 1194 Score = 49.5 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 35/95 (36%), Gaps = 3/95 (3%) Query: 24 PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE---DGSFE 80 P + E+ G + +GG+ +LP P+V +D+ E + + Sbjct: 26 PRLVSPERLAEEVRALVRERTGVVLDSRGGVTFSLLPQPAVILRDVTATVPESMFGNAAK 85 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + R + LL G + + + ++ + F Sbjct: 86 GHASVIVCRPSWRSLLEGRLLLAGLELEDAVIEFE 120 >gi|260885242|ref|ZP_05734615.2| conserved hypothetical protein [Prevotella tannerae ATCC 51259] gi|260853111|gb|EEX72980.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259] Length = 1463 Score = 49.5 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 37/343 (10%), Positives = 93/343 (27%), Gaps = 23/343 (6%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M + +G L S+ L+ +Q + + ++ + G + + Sbjct: 1 MGKIARWVVGGLLSLYLLLLIIFNFSPADRWVSRLVSQQLSDRLHTQVKIGG---VRLGL 57 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS-SK 119 F + D+ + + + + +S + EF L G + + + + +N Y Sbjct: 58 FNRLILTDVYLADQRGKE-LLRADLMSAKIEFRSLFQGRVSLRTVSLLDAQVNLYKESPD 116 Query: 120 GVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV--------YFLSDL 165 N+ K ++ + + ++ + + + +SD+ Sbjct: 117 KAPNFQFLLDAFRSKDQSPSNLDLRINSLILRRCKASYHALYAPRSPEKLNLNHLVVSDI 176 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-- 223 N +S + L S G ++ + L Sbjct: 177 NANVSLKHLTPDSINIRVRELSLREQSGLDLRRLSLRLAANKTRADIQDFDLQLPGTNIG 236 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 FP I + F+ + L G F ++ + Sbjct: 237 FPRLLAFYKPDDFFKTLYLAGRIDNAQFTTTDFGFLVPRLRGFTHTLTARGLFAVNAKEI 296 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + + + N K +S+ +++ N Sbjct: 297 VLENWYVHEEHNNLLLALSGK--LSRRNGRIVSADANIKTLNL 337 >gi|258405316|ref|YP_003198058.1| hypothetical protein Dret_1192 [Desulfohalobium retbaense DSM 5692] gi|257797543|gb|ACV68480.1| hypothetical protein Dret_1192 [Desulfohalobium retbaense DSM 5692] Length = 948 Score = 49.5 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 31/297 (10%), Positives = 82/297 (27%), Gaps = 30/297 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR+L + FL + L G PL ++ + E ++ V+ Sbjct: 14 RRLLAAMLFLLVLCLGGWLGAPLALEQLLLVQMREAGVEQP---RVQVE----------- 59 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV- 121 ++ I + + +++ + LL G + I + G Sbjct: 60 ALHPGRIALSGLSGANLGLEVQRAILHFSIQGLLQG--SADKLEIHGLTWRLKWTKAGPD 117 Query: 122 -----SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 + + + ++ I V+ ++ + L+ +++ + + Sbjct: 118 PGLPFRSPSSPGRPDSPLPLLPIKHIQVRSSYLQWQYADFAWPQPLAG-DIRTQSEQGLL 176 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 L + + EG + + + K L A + L Sbjct: 177 EFKLRSRLLGIPLRLEGEADLQQAILSAQARIPESGKPA-----APLETQAPALQAGLNA 231 Query: 237 NLFWNE-KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + + ++ + + ++S K L ++ + L Sbjct: 232 TWQQDLHGSGQGTLQAALQTANLRWPDYDVSLNKLVLDLRAEMDTD-LHFEALDLDL 287 >gi|270263283|ref|ZP_06191553.1| conserved membrane protein, putative transporter [Serratia odorifera 4Rx13] gi|270042971|gb|EFA16065.1| conserved membrane protein, putative transporter [Serratia odorifera 4Rx13] Length = 1270 Score = 49.5 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 79/301 (26%), Gaps = 36/301 (11%) Query: 21 FTVPLFIDWTDFREDFERQATLIVGKKIAVKG-GIKIHILPFPSVFFKDIRIDQKEDGSF 79 +P +R + + G V P + +++R + Sbjct: 28 LALPEL---NKYRPQVLEKVASLSGVPFQVDFMQGSWETF-GPQLEMRNVRATLPKSN-- 81 Query: 80 ESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG--VSNWFQRKSTMDMIHN 136 IE +++ + LL + D+ Q L+ + G + + Sbjct: 82 -LHIERVTLALDVWQSLLHWRWQFRDLTFYQFQLDMNTTLGGDDRKGNTIEPGKISDLML 140 Query: 137 VILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSIDSIKGS---VIAE 192 L+ ++ RI + + + + L LS+ ++ G V Sbjct: 141 HQLDHFDLRDSRISFLMPSGARAEFEIPQLTWLNGRDRHRAEGQLSLSTLNGQHGVVQLR 200 Query: 193 GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID--LFGNLFWNEKQPIYSGV 250 + ++ +Q + L N + Sbjct: 201 MDLRDNQGLLN------------TGTVYMQADNIDMKPWFTRWLRANTGLESADFSLAAW 248 Query: 251 FSVAGDFSKLLNLEL--SAKKSRL---SGNFKISDGNVRISR--YKLQSILPNSSTDEDN 303 + N+ L A R+ + + + +SR Q +P S D Sbjct: 249 LQIKNGEIAGGNVLLKQGAANWRVGTEQHRLDVDNQALALSRQGNGWQVDVPQLSLQTDG 308 Query: 304 K 304 K Sbjct: 309 K 309 >gi|168048727|ref|XP_001776817.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671821|gb|EDQ58367.1| predicted protein [Physcomitrella patens subsp. patens] Length = 623 Score = 49.5 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 33/274 (12%), Positives = 74/274 (27%), Gaps = 13/274 (4%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 ++++V+ G L + + A P + A+ + ++V + + Sbjct: 128 LIKKVVKLAGVLLVLATIFAAAAPSMFSSPRGLKTIMSMASHTIPGTVSVA---RASLGW 184 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 ++ + + + + I + RA ++SG+ D + P ++ Sbjct: 185 RKPLYLEGVTLKGIDG-ETVLYIPKIETRASLWSIVSGKAGFGDSTVTAPVVDLQQDPAS 243 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF--LSDLNLQISARFLNIIS 178 + T ++ R I+ D + N + +I Sbjct: 244 GQPYLALALTPLAKLQENKPNLNNSKKRSVAIEPPRDVALAASVKAPNGGMEIVKGKVIL 303 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 P + G I + A L I+ + + G L Sbjct: 304 PQDAATAIGPSIF-LDVAAGRFATEADDALESAAHEYRGKLPIRGNIYSDRAQAEGLGFL 362 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 G + L+L K L Sbjct: 363 SLP------QGQIHLLRPLKAELDLTPEFGKLYL 390 >gi|33240523|ref|NP_875465.1| hypothetical protein Pro1073 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238051|gb|AAQ00118.1| Uncharacterized conserved protein [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 1309 Score = 49.5 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 91/301 (30%), Gaps = 10/301 (3%) Query: 31 DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 R D E + + G+ + + + ++ Q + I L ++ Sbjct: 22 KVRPDLENKLSDQWGRTLIIGPYKGLRPW---GFAVGPSKLLQGVEDDSSVDISSLKIQI 78 Query: 91 EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIK 150 + L V + + + G + K+ +N L I + Sbjct: 79 APVASLLNWKPVVIFSPSKAKIFLKTNENGAH-FVLGKTKGGKANNFDLI-IRLDQSSGI 136 Query: 151 IIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF 210 ++D +++ ++ +++ + + LS KG + +G G + K Sbjct: 137 LLDSSKEEIKTKANAFIKLVDKKIKGSVSLSFP-DKGELFLKGGGYLNTLSFRGKARFKN 195 Query: 211 PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270 S + ++ + E+ +G G + +L+ S Sbjct: 196 FNLESFQSTIFNRYNFLARGRVNANIRVGVKEEDINCAGGIRFDGLNLRFASLD-SRTLV 254 Query: 271 RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330 S + + + + + K + L ++ + + LN + S D+N Sbjct: 255 SKSTSIRCRNKTIEMPNSKFKYGLWSADLRA--YMPIKKKAAYKLNL-LSSIHSESDINS 311 Query: 331 T 331 Sbjct: 312 P 312 >gi|237800286|ref|ZP_04588747.1| hypothetical protein POR16_15758 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023143|gb|EGI03200.1| hypothetical protein POR16_15758 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 331 Score = 49.5 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 29/307 (9%), Positives = 84/307 (27%), Gaps = 22/307 (7%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMR 89 R+ + + + + + + + + K ++I + + + + Sbjct: 5 VRDYLNDKLADMGDYRGQIS-DVDLALWRG-AYRIKGLKIVKTDGKVPVPFVDAPMIELA 62 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH--------NVILEK 141 + L + V P +NF G +N ++ + L + Sbjct: 63 VSWNSLWNDHAVVAKALFTDPQINFV---DGGNNKQASQTGQGTDWRTQLDKLLPITLNE 119 Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201 + + GRI + S + + S L + + + +G Sbjct: 120 LRINNGRITFNNFNSTPKVKIDADQVNASFYNLTNVVDVEGNRDA---EFKGKARLLGHA 176 Query: 202 -SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDF 257 + + + +++ + + D G +N Sbjct: 177 DLESTARFDPFSNFEDFDFRLRATGIQLKKLNDFSSAYGKFDFNAGDGDIVIEAQADKGQ 236 Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317 L + + + + + I R ++++ S T N+ + L+ Sbjct: 237 LTGYIKPLLRNVDVFNWHQDVENKDKGIFRSVWEALVGTSETVLKNQRENQFATRVDLSG 296 Query: 318 SENGAES 324 S + + Sbjct: 297 SVHQQDI 303 >gi|317969682|ref|ZP_07971072.1| hypothetical protein SCB02_09105 [Synechococcus sp. CB0205] Length = 1469 Score = 49.5 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 29/291 (9%), Positives = 72/291 (24%), Gaps = 9/291 (3%) Query: 33 REDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92 + E A+ +G + + + + R D + + +S+ + Sbjct: 57 KPWLEFLASRSMGHPLELGPYRGLRP---LGLAAGASRFKPGLDNPSTIEAQAVSVSLDP 113 Query: 93 LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILE-KIHVKGGRIKI 151 L L V ID+ ++ +S+G R + L + +++I Sbjct: 114 LRSLLTRSWVLQFQIDRARVDLRRNSQGSFWQLGRVPAGGEPPPLTLRYGLSGGPAQVRI 173 Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSI-KGSVIAEGTGNFDNKRSAFKITANF 210 + +L + R + + + S G + E ++ +R ++ Sbjct: 174 HGAKGAPTSLALKGSLSVDLRRRRLDTNTQLRSREAGQLRVEVRNDWQRQRLQLQLQPQA 233 Query: 211 PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270 + ++ L G + + Sbjct: 234 LKLASLLPFLPGEVKADVRGALNGRLRLERTASTNRCQGQLDLTDLRWTPGGAMEPLTSA 293 Query: 271 RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321 RL + S + + + N L Sbjct: 294 RLDLRCSPQGLRLASSPLRWSGWRG----QLQGEFPLVGAWSNQLQLQLQA 340 >gi|312890431|ref|ZP_07749968.1| glycosyl transferase family 51 [Mucilaginibacter paludis DSM 18603] gi|311297201|gb|EFQ74333.1| glycosyl transferase family 51 [Mucilaginibacter paludis DSM 18603] Length = 717 Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 94/343 (27%), Gaps = 22/343 (6%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93 +A + + H +V F I + E+ I + + Sbjct: 43 SKATAKAKRDYNLDVKIG---SAHFSGLSTVSFSGITVV-PENRDSLVSISNFEVSVKLW 98 Query: 94 PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIID 153 PLL G +++ + +D LN + KGV N+ + I Sbjct: 99 PLLFGNMKLASVKLDNGVLNLS-NVKGVKNFDFLFKKKKDTTDTHSGGDISVVANNLINQ 157 Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSID-SIKGSVIAEGTGNFDNKRSAFKITANFPA 212 L N I +I L ++ + +N S T Sbjct: 158 VLYKIPDELDIKNFTIKFHDDSINVKLLTQYALIKNSNLSSAIIVNNGESTLHFTGKMRP 217 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 +K I +K + Q + S ++L +E S ++R+ Sbjct: 218 SDKYIDVKFYADNKK----------VELPFIQKKFGMKLSFDTISTELKKVERSDGETRI 267 Query: 273 SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS-QDEENLLNFSENGAESMHDLNET 331 G + + + + + N + EN ++ + A + D+ Sbjct: 268 YGYWAVKNLLINHPKI-----ASNDIIIPSGSIDANIFIGENYVSIDSSSAIHIKDVTAN 322 Query: 332 DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374 + + K K ++K K + E Sbjct: 323 PYIKYTLKPVKVYEVKLHTDFIDAQKIFSSFPIGTFDALEGIQ 365 >gi|114569857|ref|YP_756537.1| hypothetical protein Mmar10_1307 [Maricaulis maris MCS10] gi|114340319|gb|ABI65599.1| hypothetical protein Mmar10_1307 [Maricaulis maris MCS10] Length = 1162 Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 30/303 (9%), Positives = 77/303 (25%), Gaps = 50/303 (16%) Query: 1 MLRRVLIGLGF---------LFSVVLVGAFTVPLF----IDWTDFREDFERQATLIVGKK 47 MLR+ L + F + ++ RED + + Sbjct: 1 MLRKSAKWTLIYLLEAVAALLALTIFAIGFVLWRLSSGPVELEFLREDAQAMLATAFEGE 60 Query: 48 IAVKGGIKIHILPFPS---VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFD 104 + G ++ P + D+ + + ++ + L+ G I + Sbjct: 61 VVALGSLQARFEPSTRAIVLVATDVTVAEASG-EVVTRAPRIEAGLAADALIFGRIEPVE 119 Query: 105 MYIDQPHLNFYLSSKGVSN--------------------------WFQRKSTMDMIHNVI 138 + ID ++ + G + S+ Sbjct: 120 LTIDGGSVSIVRRADGAVGAGLGGVDRISSTARLPERGGDDSVSLFEILASSGAPAQLDR 179 Query: 139 LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS------IDSIKGSVIAE 192 L + + ++++D + +F+ + + I++ + + Sbjct: 180 LRHVRISNAAVRVVDDVAGLAWFIDSAGVSLDRDDARILAEVEGRLATPSGFAPVDLRLR 239 Query: 193 GTGNFDNKRSAFKITANFPAKNKAISLKI-QLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 ++ + PA + L L PI +D + S Sbjct: 240 AGTGLESLLLEMSFSDLSPAGILPDTGPASALRALDAPIALDFVVDATRENGIRTASLQL 299 Query: 252 SVA 254 + Sbjct: 300 DIG 302 >gi|332994876|gb|AEF04931.1| putative protease [Alteromonas sp. SN2] Length = 1331 Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 38/320 (11%), Positives = 88/320 (27%), Gaps = 17/320 (5%) Query: 1 MLRRVLIGLGFLFSVVL----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 +++++ + L L + + +P + E + G + + + Sbjct: 11 LVKKIWLLLAILLVLFALLISAARYALPHI---EHNKHLLEDYISQRYGVNLTINSVHAV 67 Query: 57 HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFY 115 PS+ + + Q + I + + +F L + I + L+ Sbjct: 68 WQRSGPSIVLNSVSMAQSDASPVGLNIRQVYVELDFWQSLRRQMISSTRFELRGLKLDVD 127 Query: 116 LS--SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 + N F + + L+ ++ G + + Q + + L S + Sbjct: 128 ADRFERAGDNNFPVVDALKSLFLEQLQSFSLEEGEVLLSKNGETQSFIIDQLTWNNSGKR 187 Query: 174 LNIISPLS---IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + + + S S I + TGN D F A + +S I+ Sbjct: 188 HQGLGQMKVADVSSNSASFIIDVTGNKDAFEGVFYARAEDLDISPWVSDLIKTKRPLTES 247 Query: 231 IIDLFGNLFWN-EKQPIYSGVFS---VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 F + + L + + +VR+ Sbjct: 248 RASFEIWADVQSNGITGVQAQFEESLLEWGGEEYSTLVTGIRGGSIEAAPTQDGWSVRVD 307 Query: 287 RYKLQSILPNSSTDEDNKTK 306 + + S D K Sbjct: 308 QLVIDSGNETIEADFVGKVT 327 >gi|197335662|ref|YP_002155134.1| hypothetical protein VFMJ11_0368 [Vibrio fischeri MJ11] gi|197317152|gb|ACH66599.1| conserved hypothetical protein [Vibrio fischeri MJ11] Length = 1289 Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 30/306 (9%), Positives = 89/306 (29%), Gaps = 27/306 (8%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKI 83 ++ + E + G I++ G +K PS+ + + G+ + Sbjct: 33 FLPTLNQYQPEIETFLSETTGFSISI-GEVKGRWRNTNPSLNLRKLTAVDPSTGNEIISV 91 Query: 84 EGLSMRAE-FLPLLSGEIRVFDMYIDQPHLNFYLS------------SKGVSNWFQRKST 130 + ++ L + + + D+ ID+ + + Sbjct: 92 GAVEIQLNILSSLWAQQPQFADLRIDKLTADLTSLGPSSLGKNEEDIEAEKESDESLAKR 151 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSIDSIKGS- 188 ++ + V L +K ++ + + ++ + L + R +S+ + + Sbjct: 152 LEDLFLVRLNHFSIKSSQVAFMALDGNEKTIQIDSLQWRNERRKHLAEGIVSVIGSEINQ 211 Query: 189 ----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 + G+F + F + A I+ IQ + + + Q Sbjct: 212 LKVIANFKEKGSFKSLDGHFYVEAKNIQVTPWITDSIQKEYGITQGEVSVNAWFSFKNGQ 271 Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSG---NFKISDGNVRISRYKLQSILPNSST-D 300 P + + + + + S + + G + + + +Q + + Sbjct: 272 P-IDALVEASPSYLNWVE-DKSIHQVSVEGGVFELQPDNEGWNVFATDVQVKHQGNKWPE 329 Query: 301 EDNKTK 306 Sbjct: 330 ITGSFS 335 >gi|254883614|ref|ZP_05256324.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319642317|ref|ZP_07996975.1| hypothetical protein HMPREF9011_02575 [Bacteroides sp. 3_1_40A] gi|254836407|gb|EET16716.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317386040|gb|EFV66961.1| hypothetical protein HMPREF9011_02575 [Bacteroides sp. 3_1_40A] Length = 1549 Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 97/337 (28%), Gaps = 31/337 (9%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89 + A+ G I+V G I + ++ ++ + + L + Sbjct: 34 NFLVDKAAVYASEATGMNISV-GRISLSF--PLNLVVTNVDAASPHN-DTLLSVRRLQVN 89 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLN-------FYLSSKGVSNWFQRKSTMDMIHNVILEKI 142 + LPLL ++ V + + +N L+ + I+ K+ Sbjct: 90 VQLLPLLKKQVEVDGISLQGATVNSNDLIHGMKLNGTLGELFISSHGVALDPETAIVNKV 149 Query: 143 HVKGGRIKI-----------IDQESDQVYFLSDLNLQISARFLNIISP--LSIDSIKGSV 189 +K + + + L D++LQ + L++ S+ ++ Sbjct: 150 LLKDTDLSLCLNDTAAADTAASDTAYWKIILQDIDLQNVSFALDMPLDSLSLAASLDNAI 209 Query: 190 IAEGTGNFDNKRS---AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 + +G + F+I + L ++ Sbjct: 210 LRDGLIDLHKSAYSLQTFRIENGRVRYDNGKPLAADSLSSGLDPSHIALTDIGVKLDSLY 269 Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 Y G A +L + +G +D +R+ KL+ + + Sbjct: 270 YGGRNMKAIISQFVLKERSGVEIVSATGRMVSNDKVLRVPSLKLE----TRDSYLELNAA 325 Query: 307 VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343 + + + + A M D+ + D ++ Sbjct: 326 MDWNALDFKDEGLVSARLMADIGKPDVVRFMGSMDEK 362 >gi|71281982|ref|YP_271251.1| hypothetical protein CPS_4604 [Colwellia psychrerythraea 34H] gi|71147722|gb|AAZ28195.1| conserved hypothetical protein [Colwellia psychrerythraea 34H] Length = 842 Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 48/394 (12%), Positives = 108/394 (27%), Gaps = 41/394 (10%) Query: 12 LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP-SVFFKDIR 70 + + +G F I + ++ + I PF + DI Sbjct: 15 ILLALYLGIFLCIWLISSPVAKHFINPILAE---HQLQLSDDSSIRFNPFLMRITLSDID 71 Query: 71 IDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK--------- 119 + + +E L+++ L +I + + + + L Sbjct: 72 LSSTKSKQQYTVFSLEELTLQVALWQLAFDKIALSEFSLTRGTLKVIQHDDHLIIAGITI 131 Query: 120 -----GVSNWFQRKSTMDM--IHNVILEKIHVKGGRIKII---DQESDQVYFLSDLNL-- 167 G + + + ++L + I+I + ++ + + L Sbjct: 132 PPSTEGEELTKAQINEPATSLPYQLVLPDFLLSQFAIEIEIDSQKLQNKTHHIEIKQLAL 191 Query: 168 -QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 QI A L++ ++ T N I +N N I Sbjct: 192 SQIKATETKQEGHLALTALVDETHLSLTANTQLVSGKGDIHSNLLINNYPIEKLAPYVEQ 251 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL---SGNFKISDGNV 283 + L V L +L L + + SD V Sbjct: 252 LTELKGSLSFTSQQTVTLAEQGINLKVQKASLTLQDLLLGLAEQNFTLQTLQHNFSDVAV 311 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF---SENGAESMHDLNE------TDFF 334 + K+ + NS+ +SQ+E + + L++ TD Sbjct: 312 HLQDNKITHLAGNSNIKLT-DAILSQNESKATITAFKQLSLDDINFVLDDEPSIDITDIV 370 Query: 335 EEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368 ++ +K L Q ++++ + + + Sbjct: 371 MDDLLFSKKAALADAVAQKAIDRINKLSDEDGLD 404 >gi|226226015|ref|YP_002760121.1| hypothetical protein GAU_0609 [Gemmatimonas aurantiaca T-27] gi|226089206|dbj|BAH37651.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 1520 Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 54/165 (32%), Gaps = 13/165 (7%) Query: 3 RRVLIGLG-FLFSVVLVGAFTVPLFIDWTDFREDFERQA----TLIVGKKIAVKGGIKIH 57 R +++G L ++++ + R R + ++ V G I Sbjct: 6 RTIVLGTATVLLTLLVAVIGGIVALTQTDRGRAIILRAVLPAARAAIPGRLYV-GKIGGT 64 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 + ++ D+R DG+ + + + LL + V + +D+P + Sbjct: 65 LFTDITIDSIDLR---TPDGTPFLSTGRVRVTYDPRDLLDFRVIVRSLEVDRPQVTLVDY 121 Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162 NW + ++ ++ GR ++D + Sbjct: 122 GDDDWNWKRALRKRAPRPSMNPGRL----GRYIVVDTATLNELTF 162 >gi|150002972|ref|YP_001297716.1| hypothetical protein BVU_0375 [Bacteroides vulgatus ATCC 8482] gi|149931396|gb|ABR38094.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length = 1549 Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 97/337 (28%), Gaps = 31/337 (9%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89 + A+ G I+V G I + ++ ++ + + L + Sbjct: 34 NFLVDKAAVYASEATGMNISV-GRISLSF--PLNLVVTNVDAASPHN-DTLLSVRRLQVN 89 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLN-------FYLSSKGVSNWFQRKSTMDMIHNVILEKI 142 + LPLL ++ V + + +N L+ + I+ K+ Sbjct: 90 VQLLPLLKKQVEVDGISLQGATVNSNDLIHGMKLNGTLGELFISSHGVALDPETAIVNKV 149 Query: 143 HVKGGRIKI-----------IDQESDQVYFLSDLNLQISARFLNIISP--LSIDSIKGSV 189 +K + + + L D++LQ + L++ S+ ++ Sbjct: 150 LLKDTDLSLCLNDTAAADTAASDTAYWKIILQDIDLQNVSFALDMPLDSLSLAASLDNAI 209 Query: 190 IAEGTGNFDNKRS---AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 + +G + F+I + L ++ Sbjct: 210 LRDGLIDLHKSAYSLQTFRIENGRVRYDNGKPLAADSLSSGLDPSHIALTDIGVKLDSLY 269 Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 Y G A +L + +G +D +R+ KL+ + + Sbjct: 270 YGGRNMKAIISQFVLKERSGVEIVSATGRMVSNDKVLRVPSLKLE----TRDSYLELNAA 325 Query: 307 VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343 + + + + A M D+ + D ++ Sbjct: 326 MDWNALDFKDEGLVSARLMADIGKPDVVRFMGSMDEK 362 >gi|315637109|ref|ZP_07892332.1| conserved hypothetical protein [Arcobacter butzleri JV22] gi|315478645|gb|EFU69355.1| conserved hypothetical protein [Arcobacter butzleri JV22] Length = 919 Score = 48.7 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 35/376 (9%), Positives = 104/376 (27%), Gaps = 22/376 (5%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FP 62 + L L + +L + +++ + + K +++ + P Sbjct: 2 KALKILFYTLISLLAIYIISGFTLVPYLLKKELIKNLDENLTLKSSIE---DVKFNPITL 58 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKGV 121 + D ++ + + + L++ + R+ ++ D+ LN G Sbjct: 59 NAKVHDFKLVDENNNI-IVFFKELNISLSIFKSIEQKHFRIENITFDEIFLNIIQEKDGS 117 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 N + +E + I S +D+N + L Sbjct: 118 INLANILKPTENEEE-QIEDNTDEQTSNNIKFLVSKIDLKNADINFVSNIDKQPFSIYLK 176 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + + + + F+I ++ + + + + N Sbjct: 177 DINYTIYDLGTFKNSLSSNNLTFRIN-----EHTNVQISSAFKINPFKAYGKISINDLRI 231 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI--SDGNVRISRYKLQSILPNSST 299 ++ + F + + + + + I+ L+ Sbjct: 232 KEFIDFDKNFFNFELNNDANINLGLNYNIDTTNELALYLATDLLEINNINLKQNKKTM-- 289 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN-DDLKKDDIQYSVNKK 358 + + + +F + D + +KN + + + + Sbjct: 290 -----ASLKKLDIKRFDFDLISQNINFNGVFIDGLKANMILDKNGVNFASLVTTSTNSNE 344 Query: 359 EEKDNSHDKENQENFS 374 ++++NS+ K NFS Sbjct: 345 KKEENSNSKPWILNFS 360 >gi|164605265|dbj|BAF98443.1| AsmA family protein [Sphingopyxis macrogoltabida] Length = 421 Score = 48.7 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 24/193 (12%), Positives = 49/193 (25%), Gaps = 24/193 (12%) Query: 116 LSSKGVSNW-FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + G SNW R D + + + GR + D + L I+ Sbjct: 2 RDADGRSNWGGPRPGGSDSSPPPAIGTVRINEGRFTLKDAKRR---------LDIAGTIE 52 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 + + +G +A A A++ + + + Sbjct: 53 AKDAKGLAIAAEGQFN---------GAAAKLGAAASWAQDAKGRWPFSAELTSDLLRLSA 103 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK-----KSRLSGNFKISDGNVRISRYK 289 G + + + G K L+ + A L G + + I R Sbjct: 104 SGTMAAPLDTAHMTMRMTAHGTSLKQLDYIIEAGLFGTQAIDLDGAVRRDGTDWFIDRLD 163 Query: 290 LQSILPNSSTDED 302 + + Sbjct: 164 GRIGRSTIAATAK 176 >gi|196230638|ref|ZP_03129500.1| hypothetical protein CfE428DRAFT_2665 [Chthoniobacter flavus Ellin428] gi|196225568|gb|EDY20076.1| hypothetical protein CfE428DRAFT_2665 [Chthoniobacter flavus Ellin428] Length = 464 Score = 48.7 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 32/300 (10%), Positives = 73/300 (24%), Gaps = 27/300 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFT----VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 LR + L +++VG F V ++ FR+ ++A + + + Sbjct: 16 LRLLFWATPILLVLLIVGYFVGRAAVESYLHSDGFRQFIAKKAGDTLHADAEIA-PLS-- 72 Query: 58 ILPFPSVFFKDIRIDQKEDGSFE-SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 ++F + D +F +IE + +V + + ++ Sbjct: 73 -FAGSTIFSDGFQAKGGPDAAFSNLQIEQIRTEISLRRFFEKVWQVEQFDVQRVRVDLSG 131 Query: 117 SSKGVSNWFQRKSTMDM----------IHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDL 165 + V + K V ++ D V+ + Sbjct: 132 PRIDRPLEPAPSPLSAPKTEHTSNGWFPNRVEIGKATVHDTQLTWKDGGLRGTVFEVEPH 191 Query: 166 NLQISARFLNIISP----LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221 + +D + F + + + I Sbjct: 192 DGSWQLTGQGGRLTYGKLPPLDVNNLHLRYRAPSLFISSSELRQPSGGSLQATGEIDFTR 251 Query: 222 QLFPLAYPIIIDLFGNLFWN---EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278 + I I + L + + SG V ++S G Sbjct: 252 EADLQLTLINIAITPYLSEDWRVRTKGNLSGEVKVKSPLPARGGPQISGTVKLTQGELTA 311 >gi|34541677|ref|NP_906156.1| hypothetical protein PG2096 [Porphyromonas gingivalis W83] gi|34397995|gb|AAQ67055.1| conserved domain protein [Porphyromonas gingivalis W83] Length = 1596 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 87/314 (27%), Gaps = 29/314 (9%) Query: 3 RRVLIG---LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59 +R+L L +++ G +P W ++A+ G +I + +I + Sbjct: 9 KRILFWVLISPLLLVLLVAGLLYLPPIQQW--AVGIATQKASEATGMQIGIG---RIRLG 63 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN------ 113 + +DI K G + I L + LPLL ++ V ++ + ++ Sbjct: 64 FPLHLSLQDIT-AVKVQGDTLADIGSLRVSVSVLPLLRRQVEVPELKLQDASIHYTDSLG 122 Query: 114 -FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 L K S + V+L + + I ++ Sbjct: 123 LMDLRLKAKSIRAAHIAIDPEAKRVVLGRWQLFDTDIAYFSADTTAADTTQKEPFDWQFE 182 Query: 173 FLNIISPLSIDSIKGSVI------AEGTGNFDNKRSAFK---ITANFPAKNKAISLKIQL 223 + ++ + G + ++ + Sbjct: 183 LDRLDLKNISAEVRMPLDSVLLKTFVGKAAIAKTKMDIADMLYQVGMAQLDRTVLSYDTD 242 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN----LELSAKKSRLSGNFKIS 279 A P D + F +L+N + RLSG +++ Sbjct: 243 EGEASPTSFDYRHIALNDVSLQAKDICFHDGDMELQLVNGSLRERDRFELQRLSGRYRMD 302 Query: 280 DGNVRISRYKLQSI 293 ++ L + Sbjct: 303 RFGFLLTDLSLATG 316 >gi|182678690|ref|YP_001832836.1| hypothetical protein Bind_1717 [Beijerinckia indica subsp. indica ATCC 9039] gi|182634573|gb|ACB95347.1| protein of unknown function DUF490 [Beijerinckia indica subsp. indica ATCC 9039] Length = 1423 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 85/281 (30%), Gaps = 14/281 (4%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR+LI G + + + + L + ++ + + KI I Sbjct: 1 MRRLLIRSGVAVAALAGVSSLILLSVQTRPGKDALASFLSRQL-----SSADQKIAIGRI 55 Query: 62 PSVFFKDIR---IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 D+R I + ++I+ ++R LL+ + + + D+ ++ Sbjct: 56 EGFVPFDMRIDHITAADSQGIFAEIDNAALRWSPSALLALTVHIDALTADR--IHLARFP 113 Query: 119 KGVSNWF-QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 + ++ + + L+++ + + + L + ++ + Sbjct: 114 ASQPTPASDKPFSLPSLPPLRLDRLAIAIIDLDAVVLGQAASLSLEG-SASLANAAQGLQ 172 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 L + G A + + A+ PA +L A + I G Sbjct: 173 LQLDRKDVPGRFAANLHFVPGTEALDLDVNASEPAGGLIGTLLDLRDEPALALAIQGKGT 232 Query: 238 LFWNEKQPIYSGVF--SVAGDFSKLLNLELSAKKSRLSGNF 276 L + + + + G E L G+ Sbjct: 233 LKNWDSTLVLTADTVERLKGSAQLRGTAEGIRSTFTLDGDL 273 >gi|295687584|ref|YP_003591277.1| hypothetical protein Cseg_0133 [Caulobacter segnis ATCC 21756] gi|295429487|gb|ADG08659.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756] Length = 1077 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 31/305 (10%), Positives = 87/305 (28%), Gaps = 28/305 (9%) Query: 6 LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65 L+ LG + + AF + W+ R + R+ + ++ ++I L Sbjct: 22 LVDLGLEAVSLSMLAFIATGLVVWSG-RREISRELAESWLRDHGIQAAVEIDDLDATGFS 80 Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE---IRVFDMYIDQPHLNFYLSSKGVS 122 +R+ +++ + L + + +GE I+ + + +P + + KG Sbjct: 81 -GRVRLGSRDN--PVFAADRLEVAYDLAAPWTGERFGIQTKAVRLVRPRILASVDDKGRL 137 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182 + ++ +D + + + D L ++ + Sbjct: 138 RFGPLQALIDEALKAP------RNPNV------PGPAILVEDARLDLATPGGRVRLTGDA 185 Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITA-NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 G + D + + + + + K ++ + + + L + Sbjct: 186 SLDDGQL-----LRLDGRLAPLRYASPDLALTAKGATVSARKRGDRLTVEVSLAID-SLE 239 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 +G + +L L + N R Q+ + Sbjct: 240 ANDADLAGAAATLSADLPYPDLAGMRASGPLEARLAVKAENGRFGE--GQARGLTADLSL 297 Query: 302 DNKTK 306 + Sbjct: 298 AGRFD 302 >gi|294056198|ref|YP_003549856.1| protein of unknown function DUF748 [Coraliomargarita akajimensis DSM 45221] gi|293615531|gb|ADE55686.1| protein of unknown function DUF748 [Coraliomargarita akajimensis DSM 45221] Length = 1053 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 35/338 (10%), Positives = 90/338 (26%), Gaps = 41/338 (12%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH---IL 59 + VL + + + F V R + V + + ++ + Sbjct: 7 KTVLRIIAYAVGIYAAIGFLVV---------PPVVRYVSERV-LQAHLSPDARVRQVNMN 56 Query: 60 PF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS 117 PF + + I E G+ + ++ L ++ + + ++ P++ + + Sbjct: 57 PFTFKARVQGVSIPD-EQGAVWMSLSSATVNVSLLQSVVRLHPVMDAIRVEDPYIAVHRT 115 Query: 118 SKGVSNWFQRKSTMDM---------IHNVILEKIHVKGGRIKIIDQESDQVY--FLSDLN 166 S+ I V L K+ V+ GR D ++ Y + +N Sbjct: 116 PTEPSDEQAELPDWRDVVTQLAVVEIPKVTLHKLTVQNGRAYYTDSTNEDFYEKEVGPVN 175 Query: 167 LQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAIS--- 218 + + + + + G D + + + Sbjct: 176 FTLRDLTTARSKHNEMSFVASTPREERMEFRGELTMDPRTVQIEFELAGIQIHDLSPYYT 235 Query: 219 --LKIQLFPLAYPIIIDLFGNLFWNEKQPIY-SGVFSVAGDFSKLLNLELSAKKSRLSGN 275 + L + DL NL E +G + + + + Sbjct: 236 RFINFNLKEAVFGTSFDLVLNLSDVENVLELRNGQVLLTDMMLERRDADDRIVSLD---R 292 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313 + + + + +S + + N Sbjct: 293 LSVENMSFDFPSLEANIDRIEASGGGTLVARDKNGDIN 330 >gi|294775605|ref|ZP_06741114.1| conserved hypothetical protein [Bacteroides vulgatus PC510] gi|294450547|gb|EFG19038.1| conserved hypothetical protein [Bacteroides vulgatus PC510] Length = 1549 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 37/286 (12%), Positives = 84/286 (29%), Gaps = 27/286 (9%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89 + A+ G I+V G I + ++ D+ + + L + Sbjct: 34 NFLVDKAAVYASEATGMNISV-GRISLSF--PLNLVVTDVDAASPHN-DTLLSVRRLQVN 89 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLN-------FYLSSKGVSNWFQRKSTMDMIHNVILEKI 142 + LPLL ++ V + + +N L+ + I+ K+ Sbjct: 90 VQLLPLLKKQVEVDGISLQGATVNSNDLIHGMKLNGTLGELFISSHGVALDPETAIVNKV 149 Query: 143 HVKGGRIKI-----------IDQESDQVYFLSDLNLQISARFLNIISP--LSIDSIKGSV 189 +K + + + L D++LQ + L++ S+ ++ Sbjct: 150 LLKDTDLSLCLNDTAAADTAASDTTYWKIILQDIDLQNVSFALDMPLDSLSLAASLDNAI 209 Query: 190 IAEGTGNFDNKRS---AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 + +G + F+I + L ++ Sbjct: 210 LRDGLIDLHKSAYSLQTFRIENGRVRYDNGKPLAADSLSSGLDPSHIALTDIGVKLDSLY 269 Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 Y G A +L + +G +D +R+ KL++ Sbjct: 270 YGGRNMKAIISQFVLKERSGVEIVSATGRMVSNDKVLRVPSLKLET 315 >gi|71899461|ref|ZP_00681619.1| conserved hypothetical protein [Xylella fastidiosa Ann-1] gi|71730774|gb|EAO32847.1| conserved hypothetical protein [Xylella fastidiosa Ann-1] Length = 220 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 18/148 (12%), Positives = 47/148 (31%), Gaps = 9/148 (6%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92 + ++ G+ + + P + + +RI + + + + Sbjct: 56 QQVADWLSVRAGQPVRFD-TLSTSWTQRGPLLRLQGVRI----GPQGKVGVGQVEVLVAM 110 Query: 93 LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKI---HVKGGRI 149 L + ++ + L + S G + + + +L + V GGR+ Sbjct: 111 YTGLLPGHSLIELRLRGMALTVHRDSAGRWSVYGLPRDVGGDPLEVLRRFGELQVIGGRL 170 Query: 150 KIIDQESDQVYFLSDLNLQISARFLNII 177 + S LS +NL++ + Sbjct: 171 SVDAPSSGVSTTLSQINLRVRVAGDRLR 198 >gi|325917982|ref|ZP_08180149.1| hypothetical protein XVE_4170 [Xanthomonas vesicatoria ATCC 35937] gi|325535805|gb|EGD07634.1| hypothetical protein XVE_4170 [Xanthomonas vesicatoria ATCC 35937] Length = 1258 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 42/377 (11%), Positives = 104/377 (27%), Gaps = 55/377 (14%) Query: 12 LFSVVLVGAFTVPLFIDWTDFREDFERQATLIV--GKKIAVKGGIKIHILPFPSVFFKDI 69 + +VL+ + + R+ Q + G P + +++ Sbjct: 3 VLGLVLLALIAIYWLLQTVAGRDVLLAQVVARLPVGASFTYGSVEGPVAGP---LTLRNV 59 Query: 70 RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK--GVSNWFQR 127 E + + + PLL ++++ + + LN S + + +W + Sbjct: 60 DFKY---QDIHFTAERVYLEPDLRPLLGRKLQLDAVQVSNATLNLGKSDEPFKLPSWPES 116 Query: 128 KSTMDMIHNVILEKIHVKGGRIK----------------------IIDQESDQVYFLSDL 165 +++ + +KI V+ RI + ++ + D Sbjct: 117 LPQINVPLAIQADKIDVQNLRITRLQQPMIVLRKMQGGLEVATGELRTRDLVIDTDMGDF 176 Query: 166 NLQISARFLNII---------SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA---- 212 L + P + S+ G+ D A A P Sbjct: 177 RLHGDYIPNDDYHADLTATAVLPAARGRTPASLGLVARGDLDKMEVAIAGRAPAPLQASL 236 Query: 213 -----KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA 267 + + + L + + N + + S +G K +L+ S Sbjct: 237 VFTGRDDPTWAFRAVTEALDTSL-LMPPANGQYAAPATPIALNLSASGKGGK-ADLQGSV 294 Query: 268 KKSRLSGNFKISDGNVRISRYKLQSILPNSS---TDEDNKTKVSQDEENLLNFSENGAES 324 K+ LS + S +++ ++ ++ ++ T + F+ N Sbjct: 295 KQGELSATLQPSHISLQEQVLTVEPLVIDTFEGRTQLRGTADFRDTQNPSFRFAVNANGL 354 Query: 325 MHDLNETDFFEEEEKKN 341 + Sbjct: 355 RFTPTPDPATPDAPAVP 371 >gi|77164490|ref|YP_343015.1| hypothetical protein Noc_0975 [Nitrosococcus oceani ATCC 19707] gi|254434011|ref|ZP_05047519.1| hypothetical protein NOC27_942 [Nitrosococcus oceani AFC27] gi|76882804|gb|ABA57485.1| hypothetical protein Noc_0975 [Nitrosococcus oceani ATCC 19707] gi|207090344|gb|EDZ67615.1| hypothetical protein NOC27_942 [Nitrosococcus oceani AFC27] Length = 232 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 44/136 (32%), Gaps = 6/136 (4%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP-S 63 +++ F ++ A F + ER T I ++ + + I P Sbjct: 6 MILVGTIAFIAIVSVALIYAWFSLNGLIKAAIERYGTQITQTRVQIS---TVKIAPTAGG 62 Query: 64 VFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + I S ++ +S++ + L I + ++ P + F +S G Sbjct: 63 GTISRLTISNPPGFSSSSLIALDTISIKIDASTLRQNPIIIKEIIFHSPQVFFEISLSGK 122 Query: 122 SNWFQRKSTMDMIHNV 137 SN + + Sbjct: 123 SNIGVLRKNIVTAGEF 138 >gi|327483277|gb|AEA77684.1| Possible exported protein [Vibrio cholerae LMA3894-4] Length = 1279 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 36/340 (10%), Positives = 98/340 (28%), Gaps = 23/340 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 +L+ L + ++ + + + F+ + + ++A+ PS Sbjct: 2 WLLVSLLIVLALAVTALRILLPQM--NRFQAEIQHWLNQNSSVQVAIADVQGYWRNTHPS 59 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN--------F 114 + + ++ + + + + + L L + V D+ ++ L+ Sbjct: 60 LSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAIDWLAL 119 Query: 115 YLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172 + + R +D + L+ +K I D + + L Q Sbjct: 120 EQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQNQGL 179 Query: 173 FLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 +SI I S G+ + F ++A+ ++ ++ Sbjct: 180 RHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKDQTGI 239 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285 + L QP G N E + + SG K ++ ++ Sbjct: 240 QKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEKGWQV 298 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 + + L+ + + + + + + Sbjct: 299 NAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 336 >gi|212690584|ref|ZP_03298712.1| hypothetical protein BACDOR_00070 [Bacteroides dorei DSM 17855] gi|265754251|ref|ZP_06089440.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212666830|gb|EEB27402.1| hypothetical protein BACDOR_00070 [Bacteroides dorei DSM 17855] gi|263234960|gb|EEZ20515.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 1552 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 42/345 (12%), Positives = 95/345 (27%), Gaps = 44/345 (12%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89 + A+ G I+V G I + ++ D+ + L + Sbjct: 34 NFLVDKAAVYASEATGMNISV-GRISLSF--PLNLVVTDVDAASPH-KDTLLSVRRLQVN 89 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLN-------FYLSSKGVSNWFQRKSTMDMIHNVILEKI 142 + LPLL ++ V + + +N L+ + I+ K+ Sbjct: 90 VQLLPLLKKQVEVDGISLQGATVNSNDLIHGMRLNGTLGELFISSHGVALDPETAIVNKV 149 Query: 143 HVKGGRIKI-----------IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA 191 +K + + + L D++LQ + L++ PL S+ S+ Sbjct: 150 LLKDTDLSLCLNDTAAADTAASDTTYWKIILQDIDLQNVSFALDM--PLDSLSLAASLD- 206 Query: 192 EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG-------------NL 238 + +A + + +++ ++ Sbjct: 207 --NATLRDGLIDLHKSAYSLQTFRIKNGRVRYDSGRPSATASADSLSAGLDPSHIALTDI 264 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 Y G A +L + G +D +R+ KL+ Sbjct: 265 GVKLDSLYYEGRNMKAIISQFVLKERSGVEIVSTEGRLVSNDKVLRVPSLKLE----TRD 320 Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343 + + + D + A M D+ + D ++ Sbjct: 321 SYLELNAAMDWDALDFKKEGLVSARLMADIGKPDVVRFMGSMDEK 365 >gi|86146577|ref|ZP_01064899.1| hypothetical protein MED222_18273 [Vibrio sp. MED222] gi|85835634|gb|EAQ53770.1| hypothetical protein MED222_18273 [Vibrio sp. MED222] Length = 656 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 31/358 (8%), Positives = 92/358 (25%), Gaps = 27/358 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFER-QATLIVGKKIAVKGGIKIHILP 60 +++V + G ++ + + L + +R D + + + ++ + Sbjct: 1 MKKVFMVFGIALAIAVATIAALLLSLQT-QYRTDITNFFIKHAIEQPVLIE---DVEYQS 56 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-------- 112 + I Q E + I+ + + + ++ + I L Sbjct: 57 PYHITLMGITQSQPEKQTP-LYIDKIDLWFSSSSITEAKLVFESVLISGLQLEADDLETL 115 Query: 113 -NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY---FLSDLNLQ 168 + + + + + I ++ + S Y LS L Sbjct: 116 TSLFTQPSIKIHQLAINNLDFSTPDFNARGIDLQISDPTWNNDNSLLPYGKTQLSASQLY 175 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 + + S + + ++ + + + + L Sbjct: 176 WQGEAFDNLLIDLDLKPSDSTLYGASFDWRGAKISGQAEQYQQDWSLVNVTVDGLRLNQK 235 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 L Q + + + + L+A F S N+++ Sbjct: 236 QTQSLLSKEWDVAGIQINHINSLDILRSDVEWQDGHLAA--------FDASLENIQLPFE 287 Query: 289 KLQSILPNSSTDEDN-KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 + S + E + + + + + + T F + + N Sbjct: 288 LWKQQRAIFSLQAEGVSIDDDMFIEPSIKLNLDPNQILIEDFYTQFLQGTVQLNGKVT 345 >gi|229530264|ref|ZP_04419652.1| hypothetical protein VCG_003380 [Vibrio cholerae 12129(1)] gi|229332037|gb|EEN97525.1| hypothetical protein VCG_003380 [Vibrio cholerae 12129(1)] Length = 1279 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 36/340 (10%), Positives = 98/340 (28%), Gaps = 23/340 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 +L+ L + ++ + + + F+ + + ++A+ PS Sbjct: 2 WLLVSLLIVLALAVTALRILLPQM--NRFQAEIQHWLNQNSSVQVAIADVQGYWRNTHPS 59 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN--------F 114 + + ++ + + + + + L L + V D+ ++ L+ Sbjct: 60 LSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAIDWLAL 119 Query: 115 YLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172 + + R +D + L+ +K I D + + L Q Sbjct: 120 EQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQNQGL 179 Query: 173 FLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 +SI I S G+ + F ++A+ ++ ++ Sbjct: 180 RHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKDQTGI 239 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285 + L QP G N E + + SG K ++ ++ Sbjct: 240 QKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEKGWQV 298 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 + + L+ + + + + + + Sbjct: 299 NAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 336 >gi|255536197|ref|YP_003096568.1| hypothetical protein FIC_02064 [Flavobacteriaceae bacterium 3519-10] gi|255342393|gb|ACU08506.1| hypothetical protein FIC_02064 [Flavobacteriaceae bacterium 3519-10] Length = 1682 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 35/274 (12%), Positives = 90/274 (32%), Gaps = 17/274 (6%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +L+ I +G L ++++ A ++ L + + K+ + ++++ Sbjct: 19 ILKYTAIFIGSLLLLLVILALSLQLPGVQNFAKGKLVNYLEEKIHTKVRLD---RVYVGF 75 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 S+ +++ + +E + L + LL + + + N S G Sbjct: 76 PNSLVMENLYLQGQE-VDTLLFAKKLDVGLNIPKLLKNTADLTSIDLQGVKANVVRSKDG 134 Query: 121 VSNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 N+ + + + L+KI ++ R+ IDQ+S L + Sbjct: 135 RFNFDYIIDAFATKDSEESESKPFIISLDKIKLRDIRVSFIDQQSRNDIALYFKSFDTRV 194 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + ++ + D + A + + N+ +KI L + + Sbjct: 195 KTFDLQNNSYAAGDINMDGLRLKLKQDLLEEVAENVEEKVDSLNQQKPMKIGLNKIKFT- 253 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE 264 + + + + +F L+LE Sbjct: 254 --NFNIDYGDDNSKTFAKVIFKELSTKINQLDLE 285 >gi|229512649|ref|ZP_04402118.1| hypothetical protein VCB_000289 [Vibrio cholerae TMA 21] gi|229350326|gb|EEO15277.1| hypothetical protein VCB_000289 [Vibrio cholerae TMA 21] Length = 1279 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 36/340 (10%), Positives = 98/340 (28%), Gaps = 23/340 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 +L+ L + ++ + + + F+ + + ++A+ PS Sbjct: 2 WLLVSLLIVLALAVTALRILLPQM--NRFQAEIQHWLNQNSSVQVAIADVQGYWRNTHPS 59 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN--------F 114 + + ++ + + + + + L L + V D+ ++ L+ Sbjct: 60 LSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAIDWLAL 119 Query: 115 YLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172 + + R +D + L+ +K I D + + L Q Sbjct: 120 EQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQNQGL 179 Query: 173 FLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 +SI I S G+ + F ++A+ ++ ++ Sbjct: 180 RHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKDQTGI 239 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285 + L QP G N E + + SG K ++ ++ Sbjct: 240 QKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEKGWQV 298 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 + + L+ + + + + + + Sbjct: 299 NAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 336 >gi|114777074|ref|ZP_01452094.1| hypothetical protein SPV1_06919 [Mariprofundus ferrooxydans PV-1] gi|114552595|gb|EAU55055.1| hypothetical protein SPV1_06919 [Mariprofundus ferrooxydans PV-1] Length = 881 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 80/306 (26%), Gaps = 19/306 (6%) Query: 55 KIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 I PF + G + LS++ ++LPLL ++ + +++ L Sbjct: 54 DIDFNPFTG----SFVLVGLNAGKGM-HVRRLSVKVDWLPLLKRKVLIHSLHLHGGDLRV 108 Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + GV + + ++ D SD+NL + R Sbjct: 109 QQDAHGVWQFGSIRLDDTAGEATPEADAGSSDWQVAPAD------VQFSDINLHLEGRLS 162 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF-PAKNKAISLKIQLFPLAYPIIID 233 + LS+ ++ G + + +L I +D Sbjct: 163 DKPLSLSLPIQLLTLHLRGADASGRHGMSLRFQTGPVDLIIAGYNLAYTTLETDGDIRLD 222 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN--FKISDGNVRISRYKLQ 291 GN + + K ++ A + DG V L Sbjct: 223 A-GNQDLLTGLRTGTLRVGLGRVSLKDMDGVQLASLESVDIRDLGVHMDGKVTAGMVDLV 281 Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENG----AESMHDLNETDFFEEEEKKNKNDDLK 347 + + + + ++ NG A D + D +K Sbjct: 282 APKVTDALTGNGAMGAKAVKLQNVHVVANGKVSVASLSLDSVTAPDMNKSSANVSVDRVK 341 Query: 348 KDDIQY 353 I Sbjct: 342 AQQITV 347 >gi|229507060|ref|ZP_04396566.1| hypothetical protein VCF_002282 [Vibrio cholerae BX 330286] gi|229508785|ref|ZP_04398277.1| hypothetical protein VCE_000191 [Vibrio cholerae B33] gi|229519773|ref|ZP_04409216.1| hypothetical protein VCC_003805 [Vibrio cholerae RC9] gi|229606299|ref|YP_002876947.1| hypothetical protein VCD_001202 [Vibrio cholerae MJ-1236] gi|255743805|ref|ZP_05417762.1| possible exported protein [Vibrio cholera CIRS 101] gi|262153582|ref|ZP_06028710.1| possible exported protein [Vibrio cholerae INDRE 91/1] gi|262167616|ref|ZP_06035320.1| possible exported protein [Vibrio cholerae RC27] gi|229344462|gb|EEO09437.1| hypothetical protein VCC_003805 [Vibrio cholerae RC9] gi|229354188|gb|EEO19119.1| hypothetical protein VCE_000191 [Vibrio cholerae B33] gi|229355805|gb|EEO20725.1| hypothetical protein VCF_002282 [Vibrio cholerae BX 330286] gi|229368954|gb|ACQ59377.1| hypothetical protein VCD_001202 [Vibrio cholerae MJ-1236] gi|255738554|gb|EET93942.1| possible exported protein [Vibrio cholera CIRS 101] gi|262023952|gb|EEY42649.1| possible exported protein [Vibrio cholerae RC27] gi|262030609|gb|EEY49245.1| possible exported protein [Vibrio cholerae INDRE 91/1] Length = 1279 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 36/340 (10%), Positives = 98/340 (28%), Gaps = 23/340 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 +L+ L + ++ + + + F+ + + ++A+ PS Sbjct: 2 WLLVSLLIVLALAVTALRILLPQM--NRFQAEIQHWLNQNSSVQVAIADVQGYWRNTHPS 59 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN--------F 114 + + ++ + + + + + L L + V D+ ++ L+ Sbjct: 60 LSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAIDWLAL 119 Query: 115 YLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172 + + R +D + L+ +K I D + + L Q Sbjct: 120 EQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQNQGL 179 Query: 173 FLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 +SI I S G+ + F ++A+ ++ ++ Sbjct: 180 RHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKDQTGI 239 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285 + L QP G N E + + SG K ++ ++ Sbjct: 240 QKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEKGWQV 298 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 + + L+ + + + + + + Sbjct: 299 NAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 336 >gi|229525114|ref|ZP_04414519.1| hypothetical protein VCA_002723 [Vibrio cholerae bv. albensis VL426] gi|229338695|gb|EEO03712.1| hypothetical protein VCA_002723 [Vibrio cholerae bv. albensis VL426] Length = 1279 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 35/340 (10%), Positives = 98/340 (28%), Gaps = 23/340 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 +L+ L + ++ + + + F+ + + ++A+ PS Sbjct: 2 WLLVSLLIVLALAVTALRILLPQM--NRFQAEIQHWLNQNSSVQVAIADVQGYWRNTHPS 59 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN--------F 114 + + ++ + + + + + L L + V D+ ++ L+ Sbjct: 60 LSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAIDWLAL 119 Query: 115 YLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172 + + R +D + L+ +K I D + + L + Sbjct: 120 EQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWKNQGL 179 Query: 173 FLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 +SI I S G+ + F ++A+ ++ ++ Sbjct: 180 RHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKDQTGI 239 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285 + L QP G N E + + SG K ++ ++ Sbjct: 240 QKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEKGWQV 298 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 + + L+ + + + + + + Sbjct: 299 NAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 336 >gi|237745440|ref|ZP_04575920.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gi|229376791|gb|EEO26882.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 1096 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 47/330 (14%), Positives = 95/330 (28%), Gaps = 49/330 (14%) Query: 75 EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW---------- 124 + G K+ + + +LSG I + + + QP L + G N Sbjct: 293 KGGKTLLKMPEMGVDIARSDILSGNIGLSHIRLKQPELYLDRNKAGQWNVERLARIDMKK 352 Query: 125 -----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 + ++ ++ L ++ ++ G+++I DQ S N ++A Sbjct: 353 IPEKADSGNLKADKTHKESLLWSIALGQLTLEEGQLQIHDQVQVVPANFSMRNFGLNA-- 410 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 G ++ + +G + ++ I Sbjct: 411 -------------GDIVLDISGRNATVGKLVSTGTQVQFVHGKLNFP------EDKKRIR 451 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL---SAKKSRLSGNFKISDGNVRISRYKL 290 +E + F V + A K ++ +I NV I Sbjct: 452 KSAQKTVSEMEAQTGFGFHVNRLELNDWGVHFENRDAGKPVVT---RIDGLNVAIDHLSD 508 Query: 291 QSILPNSSTDEDNKTKVSQDEEN-LLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349 + P + + N LN S A+ +L + D + +L Sbjct: 509 NTEQPVQLSVNAGVNRRGTIAVNGSLNLSPFVADLDLNLKDVDVRFIQPYIEDFVNLSLK 568 Query: 350 DIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 +V K + + Q F+GD I Sbjct: 569 QADLTVQGKLRLSQTKRQAIQGRFTGDAGI 598 >gi|95929903|ref|ZP_01312644.1| hypothetical protein Dace_2557 [Desulfuromonas acetoxidans DSM 684] gi|95134199|gb|EAT15857.1| hypothetical protein Dace_2557 [Desulfuromonas acetoxidans DSM 684] Length = 1009 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 91/317 (28%), Gaps = 29/317 (9%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89 + + + + +K ++ P P++ F +I I+ + I L +R Sbjct: 32 EQIGAMISSRLSDNLKTPVTLK-KARLGFHPRPTLDFTEITIEANHRFK--ATIPQLHVR 88 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNF-YLSSKGVSNWFQRKSTMDMIHNVILE--KIHVKG 146 + LL G++ + + P + + + S+ T L I ++ Sbjct: 89 VSWRDLLQGQLAHSHITVVDPQIYLLPHTLQAPSDATPSSGTPFDWRKAHLPQLHITIER 148 Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKI 206 G I + ++ + + + LS + +G+ R Sbjct: 149 GEIHLA-APHGDTPQFWQISELAAKLTPSGKTGLSFQGSGNLHLPDGSIATIFSRIELSG 207 Query: 207 TANFPAKNKAISLKIQLFPLA--------YPIIIDLFGNLFWNEKQPIYSG---VFSVAG 255 + + ++ +P ID N+ + + + G +V Sbjct: 208 -MTHELGLATVQAQGKVSNTTLPASLQKAWPFQIDGRLNIQSDWRGNFHDGLRLQATVKP 266 Query: 256 DFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD 310 + L +A + LS + +D L + + S D Sbjct: 267 TAAPLQLRHANAPTIQVNQCTLSCRLQQTDELFTFDEATL----SLNKMKLSGQGFWSSD 322 Query: 311 EENLLNFSENGAESMHD 327 + N M + Sbjct: 323 LS-HYGITANSNAIMLE 338 >gi|229520011|ref|ZP_04409440.1| hypothetical protein VIF_000526 [Vibrio cholerae TM 11079-80] gi|229342960|gb|EEO07949.1| hypothetical protein VIF_000526 [Vibrio cholerae TM 11079-80] Length = 1279 Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 36/340 (10%), Positives = 98/340 (28%), Gaps = 23/340 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 +L+ L + ++ + + + F+ + + ++A+ PS Sbjct: 2 WLLVSLLIVLALAVTALRILLPQM--NRFQAEIQHWLNQNSSVQVAIADVQGYWRNTHPS 59 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN--------F 114 + + ++ + + + + + L L + V D+ ++ L+ Sbjct: 60 LSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAIDWLAL 119 Query: 115 YLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172 + + R +D + L+ +K I D + + L Q Sbjct: 120 EQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQNQGL 179 Query: 173 FLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 +SI I S G+ + F ++A+ ++ ++ Sbjct: 180 RHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRILPWLTRYLKDQTGI 239 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285 + L QP G N E + + SG K ++ ++ Sbjct: 240 QKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEKGWQV 298 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 + + L+ + + + + + + Sbjct: 299 NAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 336 >gi|157737395|ref|YP_001490078.1| hypothetical protein Abu_1149 [Arcobacter butzleri RM4018] gi|157699249|gb|ABV67409.1| conserved hypothetical protein (DUF748 domain protein) [Arcobacter butzleri RM4018] Length = 919 Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 37/378 (9%), Positives = 110/378 (29%), Gaps = 26/378 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP- 60 L+ + L L + ++ FT+ ++ +++ + + K +++ + P Sbjct: 4 LKILFYTLISLLVIYIISGFTLVPYL----LKKELIKNLDENLTLKSSIE---DVKFNPI 56 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSK 119 + D ++ + + + L++ + R+ ++ D+ LN Sbjct: 57 TLNAKVHDFKLVDENNNI-IVFFKELNISLSIFKSIEQKHFRIENITFDEIFLNIIQEKD 115 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 G N + +E + I S +D+N + Sbjct: 116 GSINLANILKPTENEEK-QIEDNTDEQTSNNIKFLVSKIDLKNADINFVSNIDKQPFSIY 174 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 L + + + + F+I ++ + + + + N Sbjct: 175 LKDINYTIYDLGTFKNSLSSNNLTFRIN-----EHTDVQISSAFKINPFKAYGKISINDL 229 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI--SDGNVRISRYKLQSILPNS 297 ++ + F + + + + + I+ L+ Sbjct: 230 RIKEFIDFDKNFFNFELNNDANINLGLNYNIDTTNELALYLATDLLEINNINLKQNKKTM 289 Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN-DDLKKDDIQYSVN 356 + + + +F + D + +KN + + + Sbjct: 290 -------ASLKKLDIKRFDFDLVSQNINFNGVFIDGLKANMILDKNGVNFASLVTTSTNS 342 Query: 357 KKEEKDNSHDKENQENFS 374 +++++NS+ K NFS Sbjct: 343 NEKKEENSNSKPWILNFS 360 >gi|89093939|ref|ZP_01166884.1| hypothetical protein MED92_01544 [Oceanospirillum sp. MED92] gi|89081825|gb|EAR61052.1| hypothetical protein MED92_01544 [Oceanospirillum sp. MED92] Length = 1289 Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 14/303 (4%) Query: 19 GAFTVPLFI--DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ--K 74 I D +D+R+D E+ + + ++ + G P+V +D Sbjct: 25 VFLVSVRLIVDDLSDYRQDIEKLLSEQLSARVHIAGISGGWRGAHPAVKLHSFSLDGLSA 84 Query: 75 EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134 + G + + G + + + + L+ + + + Sbjct: 85 DSGLSLALLNGEVALDPLASVKQLAPIFSQFDLSGLTVRYDLAKADQKQLSEGGAQKSAV 144 Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 + G + + D + + + + IS + Sbjct: 145 AHQPSTSQSRSDGSGLLEFLLLQSAVNIDDTQIVVRQKNGDEISVSP---------IHLS 195 Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN-EKQPIYSGVFSV 253 D K+ A+ AK + P L + + + S+ Sbjct: 196 LQNDGVLHQLKVNADLVAKTGTADITFVAEVEGDPKRSTTDFYLNISGLSAQLLNPWLSL 255 Query: 254 AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313 A + L+ E +G G I R+K + + + + + Sbjct: 256 ADISIEDLDAEQEIWGQSKAGKLIYLTGKTGIKRFKFEEYAFDDFSLHTALIRRDSGYQL 315 Query: 314 LLN 316 LN Sbjct: 316 QLN 318 >gi|99034162|ref|ZP_01314251.1| hypothetical protein Wendoof_01000954 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 98 Score = 48.0 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 5/79 (6%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--- 78 F DW+ +R+ ++ K+ + G IK+ ++ P + ++ + E+ Sbjct: 20 VAATFKDWSGYRKYIIKELEKTYDAKVHIGGKIKVSLI-TPKLTIYNVYVQYNENKEQKL 78 Query: 79 -FESKIEGLSMRAEFLPLL 96 + + +R FL L Sbjct: 79 SDLISVRKIEIRPSFLSLF 97 >gi|296534909|ref|ZP_06897224.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] gi|296264764|gb|EFH11074.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] Length = 345 Score = 48.0 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 22/287 (7%), Positives = 66/287 (22%), Gaps = 30/287 (10%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLS-------MRAEFLPLLSGEIRVFDM----YIDQPH 111 F + + + +++ G +R + + + Sbjct: 57 RFGFHGVTVAAEGGSGPLARLTGTLPGDGAWPLRLALAAPGLQLVAEGSLAQPDVLGGWR 116 Query: 112 LNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 L +++ + + + L + + + Q + + L ++A Sbjct: 117 LTLEATAEDATRLAPFLGPLPPAQGIDL-SLDLADAGPGALPQINRLRLRSTGLATPLAA 175 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 ++ + + V + + + +P+ Sbjct: 176 GLRLGLTSIGVSGPGEPVSLSAALTLNALPLQAEARLPPLPRMMQG---AAAPDSPWPLR 232 Query: 232 IDLFGNL------FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISD 280 L G + + + + L LS RL+G + Sbjct: 233 ATLRGEGLEASAEGQWKGGQEGELSLTASAADTASLLAALSLPAPLLTEARLTGRLRRDG 292 Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + +L S + + + + L D Sbjct: 293 RRTSLDELRLTS----RQLQAEGEAAWQEGDRPALTARLAAQRVDLD 335 Score = 39.5 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 21/186 (11%), Positives = 51/186 (27%), Gaps = 22/186 (11%) Query: 127 RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186 + + I ++GGR+ D + + L L + Sbjct: 1 AAREDAQSLPLTVAAIAIEGGRLGWRDARAGRSETLD-----------IRRFDLEAEHPD 49 Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKN-----KAISLKIQLFPLAYPIIIDLFGNLFWN 241 + G F A + + A+ + ++L A + + G+L Sbjct: 50 APMRFAGRFGFHGVTVAAEGGSGPLARLTGTLPGDGAWPLRLALAAPGLQLVAEGSLAQP 109 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV------RISRYKLQSILP 295 + + + + L L + + + +I+R +L+S Sbjct: 110 DVLGGWRLTLEATAEDATRLAPFLGPLPPAQGIDLSLDLADAGPGALPQINRLRLRSTGL 169 Query: 296 NSSTDE 301 + Sbjct: 170 ATPLAA 175 >gi|325498824|gb|EGC96683.1| hypothetical protein ECD227_2921 [Escherichia fergusonii ECD227] Length = 1245 Score = 48.0 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 81/298 (27%), Gaps = 17/298 (5%) Query: 13 FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71 +V +P +R + + G + + F P++ +DI Sbjct: 2 ALLVSGLRLALPHL---DHWRPEILNKIESATGVPVD-ASQLSASWQTFGPTLEARDIHA 57 Query: 72 DQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQRKS 129 D K+ G ++ +++ + LL + D+ Q G S Sbjct: 58 DLKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPIEPGDGGEGLEGS 115 Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSIDSI 185 + + + ++ + I + L+ LN Q R +S S+ Sbjct: 116 QLSDLFLRQFDHFDLRDSEVSFITLSGQRAELAIPQLTWLNDQARHRAEGQVSLSSLTGQ 175 Query: 186 KGSVIAEGTG-NFDNKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFWNE 242 G + + D +I + L +Q L G + ++ Sbjct: 176 HGVMQVRMDLQDNDGLLKDGRIWLQADDIDVKPWLGKWMQANIALETAQFSLEGWMTIDD 235 Query: 243 KQPIYSGV-FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 I + G S L+ + + S + + + Sbjct: 236 GDIIGGDIWLKKGGASWLGEGKTHSLSVDNLTAHITREQPGWQFSIPDTRITMDDKPW 293 >gi|149641710|ref|XP_001505789.1| PREDICTED: similar to AHNAK nucleoprotein, partial [Ornithorhynchus anatinus] Length = 5946 Score = 48.0 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 100/350 (28%), Gaps = 56/350 (16%) Query: 49 AVKGGIKIHI---------------LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93 VKG + + + P + D+ I + K++ Sbjct: 3060 KVKGDVDVSLPTLEGEVKVPDVDIKGPKLDISAPDVDIHGPDWNLKMPKMKMPKFSV--- 3116 Query: 94 PLLSGE---------IRVFDMYIDQPHLNFYLSS---KGVSNWFQRKSTMDMIHNVILEK 141 P GE + D+ I P ++ +G + N+ K Sbjct: 3117 PGFKGEGPDVNVDVDLPKGDIDISGPKVDIEAPDVSIEGPEGKLKGPKFKMPEMNIKGPK 3176 Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG-TGNFDNK 200 I + + + + + L + +++ P ++D + G G Sbjct: 3177 ISMPDFDLNLKGPKVKGDIDVPQLEGDLKGPSIDVKVP-TLDIDAPDIDIHGPEGKLKGP 3235 Query: 201 RSAF-KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259 + + N P + +I L + D+ ++ E G Sbjct: 3236 KLKMPDMHVNMPKISMP---EIDLNLKGSKLKGDVDVSIPKVEG--------DFKGPKLD 3284 Query: 260 LLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319 + E+ +LS K ++ ++ + + D K K + ++ Sbjct: 3285 VKGPEIDITSPKLSVEGKPKKSRFKLPKFHFSGPKVQTP-EVDAKVK-----KPDVDL-- 3336 Query: 320 NGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369 ++ D+N D E K K K + S K D + ++ Sbjct: 3337 --GDAKVDINAPDV--EVHGKVKGSKFKMPFLSISSPKVSMPDVELNLKS 3382 Score = 40.3 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 93/309 (30%), Gaps = 36/309 (11%) Query: 53 GIKIHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110 I + P + D+ I+ E + K+ ++++A + + FD+ + P Sbjct: 4102 DIDVS-GPKVDIEAPDLNIEGPEGKLKGPKFKMPEVNIKAPKISM-----PDFDLNLKGP 4155 Query: 111 HLNFYLSSKGVSNWFQRKSTMD-MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 + KG + + D + L+ V G + D + + + Sbjct: 4156 KI------KGDVDVSVPQIEGDIKGPDFDLKGPKVDIGAPDVDVHGPDWNLKMPKVKMPK 4209 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTG-NFDNKRSAFKITANFPAKNKAI----SLKIQLF 224 +D + +G D + I + Sbjct: 4210 FHMPGFKGEGPDVDVNLPKADIDVSGPKVDIEAPDVHIEGPEGKVKGPKFKMPEMHFHAP 4269 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL---SGNFKISDG 281 ++ P D NL + K +++ K + + + + +G Sbjct: 4270 KISMP---DFDLNLKGPRGKGDIDVALPKVEGDLKGPEVDIKGPKLDIDTPNIDIEGPEG 4326 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341 V+ ++K+ + ++ K + + + G + D+N + E + K Sbjct: 4327 KVKGPKFKMPEMHFHAP-----KISM-----PDFDLNLKGPKVKGDINASLPKVEGDLKG 4376 Query: 342 KNDDLKKDD 350 D+K + Sbjct: 4377 PEIDIKGPE 4385 Score = 39.1 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 42/351 (11%), Positives = 105/351 (29%), Gaps = 56/351 (15%) Query: 53 GIKIHILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPL--------------- 95 I I P + D+ I+ E + K+ + +A + + Sbjct: 1230 DIDIS-GPKLDIDAPDVTIEGPEGKLKGPKFKMPEMHFKAPKISMPDVDLNLKGPKVKGD 1288 Query: 96 -------LSGEIRVFDMYIDQPHLNFYL-SSKGVSNWFQRKSTMDMIHNVILEKIHVKGG 147 + GE++V D+ I P L+ + K + + +G Sbjct: 1289 VDVSVPKIEGEVKVPDVDIKGPKLDVSAPDVDVHGPDWNLKMPKMKMPKFHMPGFRGEGP 1348 Query: 148 RIKIIDQE-----SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA------EGTGN 196 + + + S + ++ I + P + A + N Sbjct: 1349 EVDVTLPKGDIDVSGPKVDIDAPDVTIEGPEGKLKGP-KFKMPEMHFKAPKISMPDVDLN 1407 Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII---DLFGNLFWNEKQ--PIYSGVF 251 + + + P + + + + I D+ + + + F Sbjct: 1408 LKGPKVKGDVDVSVPKIEGEVKVP-DVDIKGPKLDISAPDVDVHGPDWNLKMPKMKMPKF 1466 Query: 252 SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD------EDNKT 305 + G + +++++ K G+ ++S V IS + P++ + Sbjct: 1467 HMPGFKGEGPDVDVNLPK----GDIEVSGPKVDISAPDVHIDAPDAKFKGPKFKMPEMNI 1522 Query: 306 KVSQDEENLLNFSENGAESMHDLNETDFFEEEEK-KNKNDDLKKDDIQYSV 355 K + + + G + + E + + E + K + D+K + S Sbjct: 1523 KAQKISMPDVGLNLKGPKVKGEY-EVEVPKVEGEMKVPDVDIKGPKLDISA 1572 >gi|222087410|ref|YP_002545947.1| hypothetical protein Arad_4271 [Agrobacterium radiobacter K84] gi|221724858|gb|ACM28014.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 1394 Score = 47.6 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 50/399 (12%), Positives = 102/399 (25%), Gaps = 32/399 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +LR V + + + ++ V T + + + + I + + Sbjct: 11 LLRFVGYVVVAILVLAIIAVLVVGFVPGATGYAVNRVAKLVSTPDRTITIAQPSGL---L 67 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-NFYLSSK 119 S+ I + + +K++ L++ L LL+G + D L +S+ Sbjct: 68 TGSLRVGAITVTDTKG--TVAKVQNLAIDWSPLSLLTGTFHADRVAADVVDLQRLPVSTV 125 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 + + L+ + ++I + Q + L N + A +I Sbjct: 126 KAEPQAATSESSGFSLPIALDIGAIALPDLRISQAVAGQDFALV-ANGSVKANNNSIDLV 184 Query: 180 LSIDSIKGS-VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 L+ + +F + + A+ + + P I I+L G Sbjct: 185 LNANRQDVPDAKLSTNISFAPAENRLNLKADVAEPRDGLLAGLLHLPGGPAIDINLSGEG 244 Query: 239 FWNEKQPIYSGVFS-----------------VAGDFSKLLNLELSAKKSRLSGNFKIS-- 279 + + K S L F Sbjct: 245 PLSNWAGKLQAALDDKPTVSISGQHTMSADGLHHIDVKGGGDVDSLLPPTLRPLFAGQTT 304 Query: 280 -DGNVRIS---RYKLQSILP-NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334 D + + +Q+ S + N LN + G D Sbjct: 305 IDLSATFDGKGKIDIQTGNLATGSVVIAASGTLDPSGNNSLNANLLGTSGPVDFRWPMEN 364 Query: 335 EEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENF 373 E K DL S + Q Sbjct: 365 GELRAKISRADLALTGASQSAKIDAKASLESASAPQGQI 403 >gi|301624424|ref|XP_002941506.1| PREDICTED: LOW QUALITY PROTEIN: neuroblast differentiation-associated protein AHNAK [Xenopus (Silurana) tropicalis] Length = 4006 Score = 47.6 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 99/311 (31%), Gaps = 31/311 (9%) Query: 49 AVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108 V+G +K P + ++ ++ + + + + P + G+++ + I Sbjct: 963 KVEGDLK---GPKVDIKAPEVNLEAPD--MPSLHMPDIDFNLK-GPKVEGDLKGPKVDIK 1016 Query: 109 QPHLNFY---LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 P +N + G + K ++ ++VKG +++ + + Sbjct: 1017 APEVNLEAPDVDVDGKVKGPKFKMPSMPKVSMPDLGLNVKGPKVE--GELKGPKIDMKGP 1074 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI-QLF 224 + ++ + + P EG + + K I +K+ + Sbjct: 1075 EVDVAIPDVELEGP------------EGKLKMPKFKMPKFGFSGSKVDGKEIDIKLPEGE 1122 Query: 225 PLAYPIIIDLFG-NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 +D+ L + G + +++ + K +L G+ K ++ Sbjct: 1123 IDLSGPKLDISAPELDIECPEGKVKGS-KFKMPSLHMPDIDFNLKGPKLEGDLKSPKVDI 1181 Query: 284 RISRYKLQSILPNSSTDEDN-KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342 + L++ + K K+ ++F+ G + DL + + Sbjct: 1182 KAPEVNLEAPAVDIDGKVKGSKFKMPSLHMPDIDFNLKGPKVEGDLKGPKV----DIRAP 1237 Query: 343 NDDLKKDDIQY 353 + + D+ Sbjct: 1238 EVNFEAPDVDI 1248 Score = 42.6 bits (98), Expect = 0.093, Method: Composition-based stats. Identities = 41/332 (12%), Positives = 103/332 (31%), Gaps = 43/332 (12%) Query: 41 TLIVGKKIAV---KGGIKIHILPFPSVFFKDIRIDQKEDGS-------FESKIEGLSMRA 90 + GK + + +G I I P + + I+ E + + Sbjct: 2978 SKADGKDVDIKLPEGEIDIS-GPKVDISAPKLDIECPEGKVKGPKFKMPSLHMPDIDFNL 3036 Query: 91 EFLPLLSGEIRVFDMYIDQPHLNFY---LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGG 147 + P + G+++ + I P +N + G + K K+ + Sbjct: 3037 K-GPKVEGDLKGPKVDIRAPEVNLEAPDVDIDGKVKGPKFKMPSMP-------KVSMPDL 3088 Query: 148 RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207 + I + + + ++++ + I + ++ +G + F + F + Sbjct: 3089 GLNIKGPKMEGEFKGPKIDMKGPQVDVAIP-DVELEGPEGKLKMP---KFKMPKFGFSGS 3144 Query: 208 ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA 267 K+ I L ++ P + L + G + +++L+ Sbjct: 3145 -KVDGKDVDIKLPEGEIDVSGPKVDISAPELDIECPEGKLKGS-KFKMPSLHMPDIDLNL 3202 Query: 268 KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT----KVSQDEENLLNFSENGAE 323 K +L G+ K +++ L++ + V + L + G + Sbjct: 3203 KSPKLEGDLKDPKVDIKAPEINLEAPDVDMDGKVKGPKFKMPSVPKVSMPDLGLNVKGPK 3262 Query: 324 SMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV 355 E E K D+K ++ ++ Sbjct: 3263 V-----------EGELKGPKIDMKGPEVDVAI 3283 Score = 42.2 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 39/296 (13%), Positives = 93/296 (31%), Gaps = 37/296 (12%) Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY---LSSKG 120 V D+ ++ E K + + G+++ + I P +N + G Sbjct: 2802 VAIPDVELEGPEGKLKMPKFKMVE----------GDLKGPKVDIRAPEVNLEAPDVDIDG 2851 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + K + ++ ++KG +++ + ++NL+ ++ Sbjct: 2852 KVKGSKFKMPSLHMPDLD---FNLKGPKVEGDLKGPKVDIRAPEVNLEAPDVDVDGKVKG 2908 Query: 181 SIDSIKGSVIA-EGTGNFDNKRSAFKITANFPAKNK-AISLKIQLFPLAYPIIIDLFGNL 238 S + + N + + + + I L P G L Sbjct: 2909 SKFEMPSLXNMPDLDFNLKGPKMEGEFKGPKIDMKGSQVDVAIPDVELEGP-----EGKL 2963 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG-NFKISDGNVRISRYKLQSILPNS 297 + + FS + K ++++L + +SG IS + I + + P Sbjct: 2964 KMPK-FKMPKFGFSGSKADGKDVDIKLPEGEIDISGPKVDISAPKLDIECPEGKVKGP-- 3020 Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353 K K+ ++F+ G + DL + + +L+ D+ Sbjct: 3021 ------KFKMPSLHMPDIDFNLKGPKVEGDLKGPKV----DIRAPEVNLEAPDVDI 3066 Score = 39.9 bits (91), Expect = 0.66, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 98/307 (31%), Gaps = 36/307 (11%) Query: 60 PFPSVFFKDIRIDQKEDGS----FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 P ++ D+ ID K GS + + + P + G+++ + I+ P +N Sbjct: 1784 PEVNLEAPDVDIDGKVKGSKFKMPSLHMPDIDFNLK-GPKVEGDLKGPKVDINAPEVNLE 1842 Query: 116 ---LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + G + K+ + + I + + + ++++ Sbjct: 1843 ALDVDIDGK-------VKGPKFKMPSVPKVSMPDLGLNIKGPKMEGEFKGPKIDMKGPQV 1895 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + I + ++ +G + F + F + K+ I L ++ P + Sbjct: 1896 DVAIP-DVELEGPEGKLKMP---KFKMPKFGFSGS-KVDGKDVDIKLPEGEIDVSGPKVD 1950 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 L + G + +++L+ K +L G+ K +++ L++ Sbjct: 1951 ISAPELDIECPEGKLKGS-KFKMPSLHMPDIDLNLKSPKLEGDLKDPKVDIKAPEINLEA 2009 Query: 293 ILPNSSTDEDNKT----KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 + V + L + G + E E K D+K Sbjct: 2010 PDVDMDGKVKGPKFKMPSVPKVSMPDLGLNVKGPKV-----------EGELKGPKIDMKG 2058 Query: 349 DDIQYSV 355 ++ ++ Sbjct: 2059 PEVDVAI 2065 >gi|58578782|ref|YP_196994.1| hypothetical protein ERWE_CDS_01180 [Ehrlichia ruminantium str. Welgevonden] gi|58417408|emb|CAI26612.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] Length = 878 Score = 47.6 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 41/328 (12%), Positives = 105/328 (32%), Gaps = 36/328 (10%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI---- 56 M++ L+ G + L+ P FI+W + A+ ++ + + I + Sbjct: 1 MMK-FLVYFGSAILIFLLFLVVSPFFINWNSY------YASHVLKQIENISSDISVKGVN 53 Query: 57 ----HILPFPSVFFKDIRIDQKEDGSFE---SKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 ++ P + ++ ++ D S IE L ++ L LL +V+ + +D Sbjct: 54 NVTGSLV-LPKIVVNNLHVESGSDSSDYKSTILIERLELKISLLSLLLFSPKVYAVTVDG 112 Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII-DQESDQVYFLSDLNLQ 168 + +S++ + + +++ I D+ S + Sbjct: 113 LSMPLGSLVDILSSFKKGS--------FQIGTFNIRNSVINTHYDRTSFSSKPIYIKEGN 164 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 I + +D K S + D + + + +S Sbjct: 165 IKTINDTKVISGLLDIGKNSYTMTADVSLDKTQYRIAGSVSSELTKVTLSGVSYENKFDG 224 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 I+ + + + + + S ++ LS N K++D ++ + Sbjct: 225 VIVAKGSNFAQFINDLSETN--------KTSVFSFINSQEEFSLSSNIKLTDKRFELTDF 276 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLN 316 K+ + N + + S + + + Sbjct: 277 KVATGSLNGLGNITCLSYSSCNIDIDFS 304 >gi|255039092|ref|YP_003089713.1| hypothetical protein Dfer_5355 [Dyadobacter fermentans DSM 18053] gi|254951848|gb|ACT96548.1| conserved hypothetical protein [Dyadobacter fermentans DSM 18053] Length = 393 Score = 47.6 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 42/332 (12%), Positives = 98/332 (29%), Gaps = 25/332 (7%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 ++L+G+ ++ + + L R + G +K I + I+ + Sbjct: 15 KILLGILIAIVLIRLALPYIVLHF--------ANRSLANMNGYYGHIK-DIDLAIIRG-A 64 Query: 64 VFFKDIRI----DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS- 118 I I + + + + + E+ L G I ++ +P+L F Sbjct: 65 YQIDSIYINKEDSVTQKQTPFFASQTIDLSVEWKALFKGSIVG-ELVFQRPYLLFTKDKV 123 Query: 119 ---KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 + V + + +D + + + ++GG I+ D S ++ NL + A+ L Sbjct: 124 EPQEVVKDSADFRQILDKFMPLSINRCELRGGAIQYRDNSSSPKVDIAMTNLNLLAQNLR 183 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID-L 234 S T + F N A + +L + D Sbjct: 184 NSYD---SSAVLPASVHATAEIYEGKLRFDAKLNPLADAPTFDMSAELNNTNLVKLNDFF 240 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 + + VA + K+ D + + +++ Sbjct: 241 KAYAKIDVNDGRFGLYTEVAAKDEEFKGYVKPVIKNL--DVLGQEDRKDNLLQKLWEALA 298 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + +NK K + + ++ Sbjct: 299 GGAGKLFENKNKDQVATKIPFQGRLDDPKTNM 330 >gi|220933633|ref|YP_002512532.1| hypothetical protein Tgr7_0447 [Thioalkalivibrio sp. HL-EbGR7] gi|219994943|gb|ACL71545.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7] Length = 1352 Score = 47.2 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 42/347 (12%), Positives = 96/347 (27%), Gaps = 32/347 (9%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 MLRRVL G L + +++ L R Q + + ++ ++ ++ +L Sbjct: 1 MLRRVL--FGALIAFIMLATLLTVLLGTEPGTR-WVIHQGSALAPGELRIE-QVEGTLLR 56 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 V + IR ED S + +E L +R L + + + + L+ Sbjct: 57 --GVTLQGIRF---EDESASASLERLEIRINANALFLARLAITRLELHGLDLHTRPDPDP 111 Query: 121 VSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF------ 173 + + + + L H R+ D + ++ + Sbjct: 112 APAEPFQIPEAIRLPLAIDLSPAHFTDLRLSFGDADPLVIHEIHLAASADRDAARIRTLT 171 Query: 174 -LNIISPLSIDSIKG---SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF----- 224 + L + + G + + R A+ + ++I+ Sbjct: 172 VDAVDFDLDLSARAGLALPYPMQAELAWR-VRLPEAAALGLDAEEASGRVRIEGDLERLT 230 Query: 225 ---PLAYPIIIDLFGNLFWNEKQPIYSGV--FSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 + P+ + G P + + ++ + RL + Sbjct: 231 LSHGIEAPLRLSGEGEFHTLLNTPAWDLAHHWEAFTWQVPEQGP-IAVEAGRLLSTGNLD 289 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 D + + P + + E L S Sbjct: 290 DHRLELHTTVTPLDYPAQRIELTGRGDAEHLAELSLAISGEVGRLGL 336 >gi|291326554|ref|ZP_06124982.2| paral putative protease [Providencia rettgeri DSM 1131] gi|291313536|gb|EFE53989.1| paral putative protease [Providencia rettgeri DSM 1131] Length = 1242 Score = 47.2 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 38/294 (12%), Positives = 90/294 (30%), Gaps = 15/294 (5%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKI 83 L + ++R+D + + G I+ F P + D+ + K + + Sbjct: 8 LLPNIDNYRQDLIDYVEKKTDVSVQI-GKIEGAWQSFGPVLTLSDVVLQNK---TTDITA 63 Query: 84 EGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQRKSTMDMIHNVILEK 141 +++ + L S R D+ Q +++ + S G S+ Q ++ + + Sbjct: 64 NTITVELDIWSSLFSLRWRFRDLTFYQLNVDHKVPFSLGDSSEGQSLDGIEELFLRQFDH 123 Query: 142 IHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197 +K ++ + + LS LN R +S +I+ G + + + Sbjct: 124 FVLKESQLTFLTPSEQKTTLILPELSWLNDNDRHRAQGFVSLETINKQHGYLQVKLDVSD 183 Query: 198 DNKRSA---FKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSV 253 N + F + A+ +S ++ L + + Sbjct: 184 KNGVLSDGIFYLQADNIDMQPWLSRWLRDNTSLRDANFSLSSWVTLKNNRIDSGLIQLRQ 243 Query: 254 AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 L + + + L K + +L ++ N V Sbjct: 244 GEANWGTGELAQNLQVNDLLLRMKRQGNGWLFNIPELDTLKTNEFIWPRGSASV 297 >gi|326795041|ref|YP_004312861.1| membrane protein-like protein [Marinomonas mediterranea MMB-1] gi|326545805|gb|ADZ91025.1| membrane protein-like protein [Marinomonas mediterranea MMB-1] Length = 1271 Score = 47.2 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 27/210 (12%), Positives = 64/210 (30%), Gaps = 11/210 (5%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILP-F 61 +L F VVL + +R E + I+G + ++ + Sbjct: 11 LLWWSAVGFVVVLAAIVVSVKQLLPLADRYRPQIESNISQIIGLPVQIE-TFGGSLNGID 69 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAE-FLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 S+ + I + ++ +++ + F LL+ + ++ ++ L+ S G Sbjct: 70 ISINISKLGISTVSG-EAVASVDQVALSFDTFKSLLTLSPQFRNVRVNGLSLHL-KESHG 127 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN--IIS 178 S E V I + + + S ++L I Sbjct: 128 KIGLVGFNSNASPDSVSDPE--VVAERVIDYLSSQKQWIINDSKISLTSENFDSQMLRIP 185 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208 I + + +++ + K+ A Sbjct: 186 TFVIREYADRTMGQAEVFVNDQITPIKLKA 215 >gi|58700127|ref|ZP_00374646.1| conserved hypothetical protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58533357|gb|EAL57837.1| conserved hypothetical protein [Wolbachia endosymbiont of Drosophila ananassae] Length = 223 Score = 47.2 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 49/140 (35%), Gaps = 15/140 (10%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--- 78 F DW+ +R+ ++ K+ + G +++ ++ P + ++ + E+ Sbjct: 87 VAATFKDWSGYRQYIIKELEKTYDAKVHIGGKVEVSLI-TPKLTIYNVYVQYNENKEQKL 145 Query: 79 -FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV 137 + + +R FL L ++ + + N N +T + V Sbjct: 146 SDLISVRKIEIRPSFLSLFLFSLQPKSITLFGMKSN-------KENLINIINTKASGNTV 198 Query: 138 ILEKIHVKGGRIKIIDQESD 157 + +K ++ +D Sbjct: 199 DI---VIKDSQVSFKSDFAD 215 >gi|58040440|ref|YP_192404.1| hypothetical protein GOX2012 [Gluconobacter oxydans 621H] gi|58002854|gb|AAW61748.1| Hypothetical protein GOX2012 [Gluconobacter oxydans 621H] Length = 1381 Score = 47.2 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 97/318 (30%), Gaps = 32/318 (10%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLF-----IDWTDFREDFERQATLIVGKKIAVKGGIKIH 57 RR+L+ + +V VG V + I+ + + ER+ + G + + G + Sbjct: 4 RRILLRVAAGLVIVPVGLVAVAVTGVLVGINISPGQRLIERKIGPLTGDMVEISG---LS 60 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL--NFY 115 + + I + +++ +R L LL + ++ ++ + + Sbjct: 61 GFLPHHLAVAKLLIKDTKG--PWIELDNADLRWSPLSLLHLDAKITNLSASRVAVLRKMV 118 Query: 116 LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 + ST ++ ++ + GR++I D + +L A + Sbjct: 119 SEPEKTPAKPTTTSTAPSKLHLRVDLASLHVGRLEI---GPDYTVTPTAFSLDGHAHIHS 175 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI----- 230 I L ++K + + +T N K I++ I+ Sbjct: 176 IAPFLDGVTMKTLPVMDVALALKRLDQPGSLTLNVQTPKKRIAVGIRFQEGDNGFATTLG 235 Query: 231 ------IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 +DL NL + G + + G+ + Sbjct: 236 QMPQLDPLDLHLNLNGPRTASLLDFGL---GAGPIKASATGTMNLLTRVGDLHV---KAN 289 Query: 285 ISRYKLQSILPNSSTDED 302 L+ + ++ D Sbjct: 290 APSMTLRPGIAWNAIALD 307 >gi|58616841|ref|YP_196040.1| hypothetical protein ERGA_CDS_01140 [Ehrlichia ruminantium str. Gardel] gi|58416453|emb|CAI27566.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel] Length = 878 Score = 46.8 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 105/327 (32%), Gaps = 34/327 (10%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH--- 57 M++ L+ G + L+ P FI+W + A+ ++ + + I + Sbjct: 1 MMK-FLVYFGSAILIFLLFLVVSPFFINWNSY------YASHVLKQIENISSDISVKGVN 53 Query: 58 ----ILPFPSVFFKDIRIDQKEDGSFE---SKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110 L P + +++++ D S IE L ++ L LL +V+ + +D Sbjct: 54 NVTGSLVLPKIVVNNLQVESGSDSSDYKSTILIERLELKISLLSLLLFSPKVYAVTVDGL 113 Query: 111 HLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII-DQESDQVYFLSDLNLQI 169 + +S++ + + +++ I D+ S + I Sbjct: 114 SMPLGSLVDILSSFKKGS--------FQIGTFNIRNSVINTHYDRTSFSSKPIYIKEGNI 165 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 + +D K S + D + + + +S Sbjct: 166 KTINDTKVISGLLDIGKNSYTMTADVSLDKTQYRIAGSVSSELTKVTLSGVSYENKFDGV 225 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 I+ + + + + + S ++ LS N K++D ++ +K Sbjct: 226 IVAKGSNFAQFINDLSETN--------KTSVFSFINSQEEFSLSSNIKLTDKRFELTDFK 277 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLN 316 + + N + + S + + + Sbjct: 278 VATGSLNGLGNITCLSYSSCNIDIDFS 304 >gi|254496586|ref|ZP_05109454.1| transmembrane protein [Legionella drancourtii LLAP12] gi|254354210|gb|EET12877.1| transmembrane protein [Legionella drancourtii LLAP12] Length = 1308 Score = 46.8 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 35/284 (12%), Positives = 83/284 (29%), Gaps = 17/284 (5%) Query: 31 DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90 ++ D E+ +L++G+ + ++ P + K + + +D ++ L + Sbjct: 17 QYKGDVEQHLSLLLGQPVTIQTMETGWYWFQPVLKLKQVTLG--DDSKNVFRLNKLLVGI 74 Query: 91 EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149 L + +I+ +YID HL +G + ++ EK K I Sbjct: 75 NLFKSLWNWQIKSGVLYIDDMHLTL-REKQGHWTIDGISTDTINAEDMTPEKS--KQILI 131 Query: 150 KIIDQESDQVYFLSD-LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208 + QE + +S +SI + G +G + S Sbjct: 132 WLSQQERLIIKRVSAHFYFSDGGIIPVDGLNVSILNNGGHYKLKGNARLEQTNST-DFQL 190 Query: 209 NFPA-------KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261 ++ + LF + + + + Sbjct: 191 LGDGYFDADHFEDIDGKFYFSAQNVMPAQWQSLFPKATEHLEGGKGDIQLWMDIHQGTIA 250 Query: 262 NLELSAKKSRLSGNFKISDGNVRISRY--KLQSILPNSSTDEDN 303 +++ K RL+ + + I + L ++ Sbjct: 251 SVQAQIKLERLAWRLLNNQHSQLIQSFFANLSWKPNSTGWQLHG 294 >gi|300776120|ref|ZP_07085979.1| clan AA aspartic protease [Chryseobacterium gleum ATCC 35910] gi|300505253|gb|EFK36392.1| clan AA aspartic protease [Chryseobacterium gleum ATCC 35910] Length = 1675 Score = 46.8 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 31/277 (11%), Positives = 87/277 (31%), Gaps = 17/277 (6%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +LRR+ I + ++ + ++ L ++ + ++++ +++I Sbjct: 10 LLRRIAITFISILVLLTLLILSLRLPAVQNFIKDKLIVYLEKKIKTPVSLE---RVYIGF 66 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 S+ +++ + +D ++ L + L LL+ + + ++ N G Sbjct: 67 PNSLVMENLYLKG-QDVDTLLAVKKLDVGLHMLKLLNSTADITSVNMEGARANVVRKPDG 125 Query: 121 VSNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171 N+ ++ + + L+KI++K + DQ+S L + Sbjct: 126 KFNFDYIIDAFATSDKEESPSKPFIISLDKINLKDVGVTFNDQQSKNDIQLYFKSFDTRV 185 Query: 172 RFLNIISPLSIDSIKGSVIAEG-TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + ++ + + +G + K L Sbjct: 186 KTFDLN---KNNYAVNDINLDGLKLKLKQDLVEEVAKKVEKKVDFLNEKKPMNIGLRGIK 242 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA 267 + + + +F L+LE +A Sbjct: 243 LTHFDIDYGDENTKTFAKVIFKELSTKVNKLDLENNA 279 >gi|120608812|ref|YP_968490.1| hypothetical protein Aave_0103 [Acidovorax citrulli AAC00-1] gi|120587276|gb|ABM30716.1| conserved hypothetical protein [Acidovorax citrulli AAC00-1] Length = 457 Score = 46.8 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 33/279 (11%), Positives = 90/279 (32%), Gaps = 22/279 (7%) Query: 40 ATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE 99 A ++G + V ++ H+LP P V + +Q+ + + A + LL Sbjct: 63 AGDLLGVPVVVD-RLEWHLLPAPRVVLHGVHTEQEAP----VSADRIVADARWSDLLRLR 117 Query: 100 IRVFDMYIDQ---PHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR---IKIID 153 + + + ++ P L+ + L ++ V+ ++ I Sbjct: 118 LALARLRLEGAAIPQLSLSQFK----VRDAEEDGPAGFGPFTLAEVPVEHAEWQGVRWIG 173 Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213 ++ + + ++ + R + + S + E G R +TA + Sbjct: 174 RQGRDLAYGGSVDFGPAWRPVRGLLEREGASPPTRLAIEREGE---DRWRADVTAGGRTE 230 Query: 214 NKAISLKIQLFPLAYPIIIDLFG---NLFWNEKQPIYSGVFSVAG-DFSKLLNLELSAKK 269 + L+ +D G + + +G + +A Sbjct: 231 RGELRLQESGERYRVTGSLDFSGVDVVGLMDAFERRSIVSGRASGHTDLIAEGDDPAAAM 290 Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308 L + ++ + L++ + ++ +D+ T++ Sbjct: 291 RALQTRTSFTVARAKLLTFDLEAAIRSAGSDKGGTTQLD 329 >gi|307826261|ref|ZP_07656470.1| membrane protein-like protein [Methylobacter tundripaludum SV96] gi|307732723|gb|EFO03591.1| membrane protein-like protein [Methylobacter tundripaludum SV96] Length = 1266 Score = 46.8 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 39/376 (10%), Positives = 86/376 (22%), Gaps = 47/376 (12%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVF 65 + L + + L ++ D + +VG + + G + + P + Sbjct: 12 LIFWSLIAAAIGLTGVRLLLSGIEHYKSDLATSISALVGTPVTI-GRLGAKMRGFNPELI 70 Query: 66 FKDIRIDQ--------------------------KEDGSFESKIEGLSMRAEFLPLLSGE 99 KDI + + + + + L +L Sbjct: 71 LKDIAVSSQAAPVHPPSGATQANPLQADLSSAAPTGNEEPAIQFNEIRLGINLLDMLVRR 130 Query: 100 --IRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI-HNVILEKIHVKGGRIKIIDQES 156 + + + L G K++ + K V I D+ S Sbjct: 131 DLLSSSWVTLVGAKLAIKRQQDGSIVIVGLKASGGQPQWLLQGGKYEVLQSEIIWQDEAS 190 Query: 157 DQVYFL---SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213 L DL + + + + G+ + +F Sbjct: 191 RARPLLFNGVDLAISNQGEHHRLNMLMKLPKRVGN-ALRVSMDFKGNVFEPSTIEGRVYI 249 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS 273 L +L L + D ++ G + A S + ++ Sbjct: 250 EGQAVLLPELAALGQASVGD-RIHINAGTGDFKIWGDWRQAQLTSMDVAAQIQQMTLVRQ 308 Query: 274 GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN-ETD 332 + S ++ R D N + Sbjct: 309 DKREFSVKQLKT-RLHWGLNDAGKQWQLD---------VNDFSLETQDNPKDVVKKWPAA 358 Query: 333 FFEEEEKKNKNDDLKK 348 F ++ + L K Sbjct: 359 VFSVSGQRRDDAALHK 374 >gi|90020024|ref|YP_525851.1| hypothetical protein Sde_0375 [Saccharophagus degradans 2-40] gi|89949624|gb|ABD79639.1| hypothetical protein Sde_0375 [Saccharophagus degradans 2-40] Length = 382 Score = 46.8 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 45/372 (12%), Positives = 111/372 (29%), Gaps = 43/372 (11%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 +V I LF++++ P + + + G +++ I +H+ + Sbjct: 11 KVFIAACILFTLLVALRMLAPTIV-----KNIVNQSLDNAPGIAGSIQ-DIDLHLYRG-A 63 Query: 64 VFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + I + ++ I L + + L+ G++ ++ QP F + + Sbjct: 64 YQIEGIELRTVKNNIEHPFVTISELDISIFWTKLIRGKVVT-ELVFKQPSFTFADTKEEQ 122 Query: 122 S-------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQES----DQVYFLSDLNLQIS 170 + N + + ++++ V G + + + +SD+N + Sbjct: 123 TKKYEAAANKSTWLGISEQLVPFDIDRLEVIDGHFTFEGKSNTLNQKGAFQVSDINGVVV 182 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGN-----FDNKRSAFKITANFPAKNKAISLKIQLFP 225 + K + GT + + + + + +K + + Sbjct: 183 GITSPSQYDTENNKSKNTTSTRGTLTGYGMVYGESKVTAEGSFDPFSKKPMFDVDAHIDD 242 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 + L + + +G F A EL A L+G K+ + + Sbjct: 243 IQAK---HLDALIKIYTPFDVEAGSFMAAT--------ELKADMGELTGYLKVGADELDV 291 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 +K Q I + + + + DL T E N Sbjct: 292 FSWK-QDIEIDGDNPFEALADALIGGIANIL-----SNRETDLVATQIPIEGSLNNPETS 345 Query: 346 LKKDDIQYSVNK 357 + + + N Sbjct: 346 VIESFLSLLNNA 357 >gi|270159561|ref|ZP_06188217.1| conserved hypothetical protein [Legionella longbeachae D-4968] gi|269987900|gb|EEZ94155.1| conserved hypothetical protein [Legionella longbeachae D-4968] Length = 1313 Score = 46.4 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 88/298 (29%), Gaps = 27/298 (9%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67 L + V + W ++ + E+ +L++G+ + ++ P + Sbjct: 3 LAVFIIFMAVFSSIFRALTPWAKEYKGEIEQHLSLLLGQPVTIQTIETGWYWFHPVLKLN 62 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVS---- 122 + + +D + + L + L + +I+ +YID HLN Sbjct: 63 QVTLG--DDSNKNFHVNKLLVGINLFKSLWNWQIQPGVLYIDDMHLNL-REKDAHWTIDG 119 Query: 123 --------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 + K+ +I E++ +K + + + LN+ ++ Sbjct: 120 ITTNALNSDMTPEKTKQILIWLSQQERLIIKHVSAYFYFSDGG-LIPVDGLNVSVANSGG 178 Query: 175 NIISPLS---IDSIKGSVIAEGTGNFDNKRS-AFKITANFPAKNKAISLKIQLFPLAYPI 230 + + G G FD+ K F AKN + LFP A Sbjct: 179 HYKFKGGARLAQTNSTDFQLLGDGYFDSDHFEEIKGRFYFSAKNIVPAQWQSLFPQATEH 238 Query: 231 IIDLFGNLFWNEKQP-----IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 + GN+ +LL + S N NV Sbjct: 239 LEGGKGNIALWVDIRHGSITSVQAQVDFKRLAWRLLRNQQSQLVQSFFANLSWKPDNV 296 >gi|288959224|ref|YP_003449565.1| hypothetical protein AZL_023830 [Azospirillum sp. B510] gi|288911532|dbj|BAI73021.1| hypothetical protein AZL_023830 [Azospirillum sp. B510] Length = 1193 Score = 46.4 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 86/303 (28%), Gaps = 51/303 (16%) Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + +R + + + + + LL G + + + +P L+ + G Sbjct: 21 RLDLRARRVRALNADG-VELAAVPEMGIGFSIPALLRGTLSPTRIDLVRPRLSVLRRADG 79 Query: 121 VSNWFQRKSTMDMIHNVI-------------------------LEKIHVKGGRIKIIDQE 155 + R T L ++ V G +++ ++ Sbjct: 80 SLAFDVRAETEPDRKPDDGAPDLMDEALESLRRPPDIDRPLGLLRRLSVAGADLRVENRM 139 Query: 156 SDQVYFLSDLNLQISARFLNIISPLSID----------------SIKGSVIAEGTGNFDN 199 + + ++ ++ + + +V A G N + Sbjct: 140 LGLSWHATRADIVLTRDAQGAQGRARVTLDLGTAGGGTAGGTGAARAVTVAATGHYNIAD 199 Query: 200 KRSAFKITANFPAKNKAISLKIQLFPLA---YPIIIDLFGNLFWNEKQPIYSGVFSVAGD 256 + ++ + + L PL+ P+ + L + + G Sbjct: 200 TTTDLSLSVDGLEPAALAEIGPALAPLSAIRLPLSGTVRTRLDSRFQPLTADLALNSGGG 259 Query: 257 FSKLLNL------ELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD 310 + L +S + L G ++ +RI+ L++ P+ S + Sbjct: 260 GGGTIALPELWPRPVSVQSLALRGTLDVAGRRLRIADLALKAESPDDSGPLALNGQGELG 319 Query: 311 EEN 313 E N Sbjct: 320 ETN 322 >gi|167035088|ref|YP_001670319.1| hypothetical protein PputGB1_4093 [Pseudomonas putida GB-1] gi|166861576|gb|ABY99983.1| conserved hypothetical protein [Pseudomonas putida GB-1] Length = 357 Score = 46.4 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 38/361 (10%), Positives = 99/361 (27%), Gaps = 20/361 (5%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R L+GLG L +++ +P + R+ + + + V + + Sbjct: 6 RWPLLGLGSLIVLLVALHLALPYLV-----RDYLNDKLADMGDYRGQVA-DVDLAWWRG- 58 Query: 63 SVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + ++I + + + + L + V ++ +P LNF Sbjct: 59 AYQINGLKIVKTSGKVPVPFLDAPLIDLSVSWRSLWYDKAVVAEVTFVRPELNFVDGGSK 118 Query: 121 VSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 ++ + + + + L ++ + G + + S L L + R L Sbjct: 119 QASQTGQGTDWRQQLEKLLPITLNEVRIDNGVLTFRNFNSKPPVDLKATQLNANIRNLTN 178 Query: 177 ISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 + EGT + + T + + +++ + + D Sbjct: 179 VRDKKGRRDAS---FEGTALIAGDAKVESRATFDPFSDFDDFKFRLRATGIELRKLNDFA 235 Query: 236 ---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 G +N L + + + R ++ Sbjct: 236 SAYGKFDFNAGHGDVVIEAQAENGRLNGYIKPLLRDVDVFDWQQDVEEKDKGFFRSVWEA 295 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 ++ + T N+ K L+ S + + + N ++ Sbjct: 296 LVGATETVLKNQPKNQFATRVELSGSVHKQDISAFEAFLQILRNGFIQAFNARYERGAPD 355 Query: 353 Y 353 Sbjct: 356 A 356 >gi|218708194|ref|YP_002415815.1| hypothetical protein VS_0130 [Vibrio splendidus LGP32] gi|218321213|emb|CAV17163.1| hypothetical protein VS_0130 [Vibrio splendidus LGP32] Length = 617 Score = 46.4 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 33/358 (9%), Positives = 95/358 (26%), Gaps = 27/358 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFER-QATLIVGKKIAVKGGIKIHILP 60 +++V + G ++ + + L + +R D + +++ ++ + Sbjct: 1 MKKVFMVFGIALAIAVATIAALLLSLQT-QYRTDITNFFIKHAIEQRVLIE---DVEYQA 56 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-------- 112 + I Q E + I+ + + +L ++ + + I L Sbjct: 57 PYHITLMGITQSQPEKQTP-LYIDKIDLWFSSDSILETKLVLDSVLISGLQLEANDLDTV 115 Query: 113 -NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY---FLSDLNLQ 168 + + + N I ++ + S Y LS L Sbjct: 116 TSVFTQPNLKLRQLAINNLDFSTPNFNARGIDLQISDPTWNNDNSLLPYGKTQLSASQLY 175 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 + + + S + + ++ + + + + L Sbjct: 176 WQSEAFDNLLIDLDLKPSDSTLYGASFDWRGAKISGQAEQYQQDWSLVNVTVDGLRLNQK 235 Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288 L Q + + + + L+A F S N+++ Sbjct: 236 QTQSLLSKEWDVAGIQINHINSLDILRSDVEWQDGHLAA--------FDASLENIQLPFE 287 Query: 289 KLQSILPNSSTDEDN-KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 + S + E + + + + + + T F + + N Sbjct: 288 LWKQQKAMFSLQAEGVTIDEDMFIEPSIKLNLDPNQILIEDFYTQFLQGTVQLNGKVT 345 >gi|78777839|ref|YP_394154.1| hypothetical protein Suden_1642 [Sulfurimonas denitrificans DSM 1251] gi|78498379|gb|ABB44919.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM 1251] Length = 665 Score = 46.4 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 43/362 (11%), Positives = 98/362 (27%), Gaps = 37/362 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + + V+ + + E + + ++ Sbjct: 1 MKYLAWISAIILFFVVSVYVVAFTPVGNNLIKPIIEAKIQERIKVTTKME---------N 51 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 S+ D +I + D K EG+ + EI ++ +P + G Sbjct: 52 FSLSMSDFKITLELDKGNFIKAEGIYSIFAKSFDFNYEIDFKNLKTLKPL--LEMPLNGA 109 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + G+ + ++ LSDLN +II+ + Sbjct: 110 FKTDGVVRGDLAFMKI--------DGKSDVAQSDTSYHVELSDLN------PTSIIANMK 155 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK---NKAISLKIQLFPLAYPIIIDLFGNL 238 + + + I + + L + + P + N+ Sbjct: 156 NAKLSLLLYLGAKNPYAAADVNLDINLKSITPHKLDGDVKL-VTKNGVINPEFMKSDFNV 214 Query: 239 FWNEKQPIYSGVFSVAGDFSKLL-NLELSAKKSRLSGNFK----ISDGNVRISRYKLQSI 293 + S + GD +L + K SGN +D + L+ + Sbjct: 215 TVPKSSFDMSLDAKLKGDDLVYSCDLTSNLFKINSSGNLTPEPFKADLKYALDVENLEVL 274 Query: 294 LPNSSTDEDNKTKVS---QDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350 P ++ D K++ + N L N + ++ + + D Sbjct: 275 KPITNADIRGALKLNGTLSGDRNRLLVRANSDVAASQTTLEAVLKDFTPISLRAKITDLD 334 Query: 351 IQ 352 I Sbjct: 335 IA 336 >gi|42523088|ref|NP_968468.1| hypothetical protein Bd1583 [Bdellovibrio bacteriovorus HD100] gi|39575293|emb|CAE79461.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio bacteriovorus HD100] Length = 321 Score = 46.4 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 60/180 (33%), Gaps = 13/180 (7%) Query: 3 RRVLIGL----GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGG-IKIH 57 R++L + G +F +V+ + + D + Q + + + V+ +K+ Sbjct: 5 RQLLKLIRESKGKIFVMVVSALVFAFMLFPFDDLSDLISSQVSRLSNNSVYVQFEKLKMS 64 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS----GEIRVFDMYIDQPHLN 113 + P P V + I+ + L + L+ G + + ++ Sbjct: 65 LFPQPGVKMDQVYIESI--RTPAISATELVITPSVRGLIQQKPYGHVSAKGLLKGDVDVH 122 Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVILEKIH-VKGGRIKIIDQESDQVYFLSDLNLQISAR 172 SK N +R + L + + I + Q + + L+DL Q Sbjct: 123 VGKGSK-TENGAERHKIEVSAKKISLHDLREMANLPILLKGQLNLESTALADLTFQEQPD 181 >gi|239993730|ref|ZP_04714254.1| hypothetical protein AmacA2_04511 [Alteromonas macleodii ATCC 27126] Length = 370 Score = 46.4 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 39/360 (10%), Positives = 106/360 (29%), Gaps = 27/360 (7%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 +RV L L ++ +P + V G + + + Sbjct: 6 KRVCYVLIALLLTLIAIRLYLPY-----AAASYINTTLSQSKAYNGRV-GDVDLMLWRG- 58 Query: 63 SVFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF------ 114 + + + + + K + + + L G + ++ P +NF Sbjct: 59 AYSLEHVLLYKANGQVDRPLFKADYVEFTLSWSQLFKGAAVG-KVIVNSPEINFVDGNTE 117 Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS--DLNLQISAR 172 S G + D + + ++K+ + G++ + ++ ++ D+ L+++ Sbjct: 118 ERSQSGKDENWLS--IADQLFPLRIDKLTINQGKVAFHNPDTSPAIDIALHDIQLEVNNL 175 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PII 231 + DS + A+G + N + IQ + Sbjct: 176 VNSDNLS---DSRVATAKAQGQTAQQGT-ISLNAKLNPATTAPTFDVDIQADNVGLVNFK 231 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--RLSGNFKISDGNVRISRYK 289 L ++ + + VA + K+ + S I Sbjct: 232 NLLDTYAPFDLEAGTLTLAAEVASNEGKVKGYIKPILHNVEVFSWKGDIERDGDGFIEGS 291 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349 +++I + +N+++ + + ++ T + + N D++K Sbjct: 292 IEAISAFVTELFENQSEDQIATRIPVEGDLSSPDTQTWEAFTAILKNAFIEAFNGDVEKS 351 >gi|224025210|ref|ZP_03643576.1| hypothetical protein BACCOPRO_01944 [Bacteroides coprophilus DSM 18228] gi|224018446|gb|EEF76444.1| hypothetical protein BACCOPRO_01944 [Bacteroides coprophilus DSM 18228] Length = 643 Score = 46.0 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 33/325 (10%), Positives = 85/325 (26%), Gaps = 20/325 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQA---TLIVGKKIAVKGGIKIHI 58 ++R LIG G VVL + + ER+ G I + Sbjct: 1 MKRKLIGAGGGLLVVLGLSLFLLWGFRNPVINSMAERKILAMKERYGLDIHYD---YLEF 57 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN-FYLS 117 + F + + E I + LL G + + + ++QP L Sbjct: 58 TKTGRILFGGLSVV-PEQRDTLLTIHSAEITPGLWQLLRGNLEIRRISMEQPELRFVKKG 116 Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 ++ ++ +K + + + + L L + + Sbjct: 117 TQANYDFMFLGDRTSRPETSRPDK-----SSAEYDRRAGLLLKTIFRL-LPSEGKLTRLR 170 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG- 236 D+ S+ ++ I K + ++ P + + + + Sbjct: 171 ISEKKDNNSVSLYIP-EFRIKDRHFQSHIQFVEDGKEQHWQTSGEIDPSEHLLSLHIQAP 229 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN---FKISDGNVRISRYKLQSI 293 ++ + + + S + + + + L Sbjct: 230 DVAVPYLKRRLGAKIHFDELMLSFIQKDGSPMQLQGKAEVRGLSLFHHRLSPEVINLNHG 289 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFS 318 + + + D + + F+ Sbjct: 290 EVDFHLNI-GSQSIELDSCSTVRFN 313 >gi|239996503|ref|ZP_04717027.1| hypothetical protein AmacA2_18801 [Alteromonas macleodii ATCC 27126] Length = 773 Score = 46.0 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 46/396 (11%), Positives = 108/396 (27%), Gaps = 31/396 (7%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M +R L + ++LV + V I + + +++ I Sbjct: 1 MRKRTLSAILLSPVLILVALYAV--LISP--LGGPTVKLLANTFVENLSID---AIDGGF 53 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 ++ ++ + + + + + L + V ++ ++ L ++ Sbjct: 54 ADTLEVHNVEWENPQWK---VSAQYTYIDITWRCLFEPRVCVNEVTLENATLTQRSNAPD 110 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKG------------GRIKIIDQESDQVYFLSDLNLQ 168 S+ +++ + + + + +++ D E + L + + Sbjct: 111 SSDDAPAGGQIELPLPIDVGYLALTNIKLALLTTTVEIDELELTDFEGNSDLILDSIAAK 170 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA- 227 L + S A T + + + A + SL + L Sbjct: 171 GVRIALLNQDEAASSSPAAMTNASETNSEQPAPKKEQAPSADSALPTSYSLSYDVPLLPN 230 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 I L F E I G F LL + + + Sbjct: 231 IATPIPLSLGTFLVEDLHIIQGESKQHISFISLLEAHFKGSDVAIE-EMTVVHEQGEVKG 289 Query: 288 YKLQSILPNSSTDEDNKTKVSQDEEN-LLNFSENGA--ESMHDLNETDFFEEEEKKNKND 344 ++ N + K + L+ + GA + + N Sbjct: 290 KASATLDGNFPLNVAINAKTKLGDTPQELSVAAAGALDDLTLSVVAKGAVTANANLMANI 349 Query: 345 DLKKDDIQYSVN----KKEEKDNSHDKENQENFSGD 376 I+++ N +N+ KE Q SG Sbjct: 350 LDSNLPIEFTANWQEQAIPTVENTTLKEGQLTLSGT 385 >gi|149369919|ref|ZP_01889770.1| hypothetical protein SCB49_02559 [unidentified eubacterium SCB49] gi|149356410|gb|EDM44966.1| hypothetical protein SCB49_02559 [unidentified eubacterium SCB49] Length = 523 Score = 46.0 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 42/350 (12%), Positives = 113/350 (32%), Gaps = 28/350 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAV-KGGIKIHILPF 61 + + I LG AF V +F T + + I +G I ++ Sbjct: 6 KLIFITLGIFLI-----AFAVTVFYVNTTVKSKINHFLENRLPPHITSTQGKIDVNTFDG 60 Query: 62 PSVFFKDIRIDQKEDGS----FESKIEGLSM-RAEFLPL-LSGEIRVFDMYIDQPHLNFY 115 +V D+ + K ++ L + + ++ +I+V D+ + P++ +Y Sbjct: 61 -TVTLSDVLVKIKNKNDTLTHTFVTLKKLVVEDVGYWDYIINKKIKVEDIKLKDPNITYY 119 Query: 116 LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 + + + ++++++++ II +E D ++ + + Sbjct: 120 KDKVALKKDTLISPPIKLFKPFLIDELNLENATFTIIQKEKDSLFLQTK-----NTNIKI 174 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 +S ++++ + + + ++ + + + SL I+ ++ D+ Sbjct: 175 DNIEISKETLRNKIPVKYS-SYKTTADSIFVKISPYENVTVNSLNIKNNKVSLQ---DIN 230 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 ++ K +++S +F + I + P Sbjct: 231 LKTKYSRKALSKILTKEQDHFNVHFNEIQIS------EVDFGFKKNRLFIKSPSIIIDTP 284 Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345 N+S D +NL + A +N+ E + Sbjct: 285 NASIYRDKLVADDPTIKNLYSKMLRKATIDLTINKVAINNGEISYTERVK 334 >gi|144898142|emb|CAM75006.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense MSR-1] Length = 291 Score = 46.0 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 20/263 (7%), Positives = 64/263 (24%), Gaps = 40/263 (15%) Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKIHI----------LPFPSVFFKDIRIDQKED 76 + E +GG+ + + + + ++ Sbjct: 36 VALDFLTPYIEEALAAP-------EGGVSVRLDTTVLALGANNRTLEIRALGVNAYVGDN 88 Query: 77 GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN 136 + + +++ LL+G++ + + +P L+ S G + Sbjct: 89 ARPIASVPEIALTLSGQALLNGQLAPKSITLLRPRLHLVRSVDGRFQMDIGAVGAETPTP 148 Query: 137 V-----------------------ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 L++ + + + D + + D ++++ Sbjct: 149 PSGNAAESLLAALVGEPDPTKPGRSLQRAAIIDADLTVDDLYLNTTWQAKDADVELHRVE 208 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 + ++ G ++ K+ A + +L + Sbjct: 209 GGLDGSAHLEFDLGGETGIADATVTYRKDGDKLGAEIEVSGIRPAALARLGGPLTQLQAL 268 Query: 234 LFGNLFWNEKQPIYSGVFSVAGD 256 + SG + G Sbjct: 269 DLPLAGMVRAKGDVSGKVEIRGV 291 >gi|308805130|ref|XP_003079877.1| unnamed protein product [Ostreococcus tauri] gi|116058334|emb|CAL53523.1| unnamed protein product [Ostreococcus tauri] Length = 2061 Score = 46.0 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 44/149 (29%), Gaps = 9/149 (6%) Query: 2 LRRVLIGLGFLFSV--VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59 L++ + L +V + P + A+ +VG+ + V + + Sbjct: 147 LKQSVKWALALTAVMSAVFHYIVGPAVVSPRL--PYIGEMASSVVGRPVRVGRCKSLSFM 204 Query: 60 PFPS----VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + + + E +++ + + + L + V ++ ++ + + Sbjct: 205 GALGFGKFLEVGPVVLGPSETEKSIVEVDSVKISYDVLRSILRRKLVTEVNLEGVNASLR 264 Query: 116 LSSKGVSNWFQRKSTMDMI-HNVILEKIH 143 + + + L I Sbjct: 265 QGENNSWFGYPEDTNPLSSRPTLQLGSIS 293 >gi|27364839|ref|NP_760367.1| hypothetical protein VV1_1454 [Vibrio vulnificus CMCP6] gi|27360984|gb|AAO09894.1| Possible exported protein [Vibrio vulnificus CMCP6] Length = 1295 Score = 46.0 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 86/303 (28%), Gaps = 29/303 (9%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89 F+++ + G +++ PSV + + ++ + + Sbjct: 38 NQFQDEIKTWVKQGTGLDVSISSVSGSWRNSHPSVALQGFEAFLPGEKKVNISVDEVHIE 97 Query: 90 AEFL-PLLSGEIRVFDMYIDQPHLNFY----LSSKGVSNWFQRKSTMDMIHNV------- 137 + L +L + V ++ + L+ ++++G + + + + Sbjct: 98 FDLLESILRLQPVVANLNMSGLALDIRSIELVAAEGPPTREASSESQESSNLIKQLDNLL 157 Query: 138 --ILEKIHVKGGRIKIIDQES-DQVYFLSDLNLQISARFLNIISPLS-----IDSIKGSV 189 LE+ V +I ++ + L + +S ++++ S Sbjct: 158 LRQLEEFSVTQSKIWYQSVSGENRRLDIDRLRWRNQGAHHLAEGVVSVAGTNLNALLVSA 217 Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 G+ + F + A A + ++ ++ I L L QP Y+ Sbjct: 218 NFVDHGSLLDVSGEFYVNAEEIAVTQWLTRYVKKETGIDSGKISLKSWLTLQHSQPRYAF 277 Query: 250 ------VFSVAGDFSKLLNLELSAKKSRLSG---NFKISDGNVRISRYKLQSILPNSSTD 300 S + L LE K G +R + + Sbjct: 278 VELLPSELSWTENGQHELTLESGILKLSPDGEGWKVSGHSLTLRTDEIEWPQLDIAFDWQ 337 Query: 301 EDN 303 Sbjct: 338 PQG 340 >gi|37681113|ref|NP_935722.1| hypothetical protein VV2929 [Vibrio vulnificus YJ016] gi|37199863|dbj|BAC95693.1| predicted membrane protein [Vibrio vulnificus YJ016] Length = 1295 Score = 46.0 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 86/303 (28%), Gaps = 29/303 (9%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89 F+++ + G +++ PSV + + ++ + + Sbjct: 38 NQFQDEIKTWVKQGTGLDVSISSVSGSWRNSHPSVALQGFEAFLPGEKKVNISVDEVHIE 97 Query: 90 AEFL-PLLSGEIRVFDMYIDQPHLNFY----LSSKGVSNWFQRKSTMDMIHNV------- 137 + L +L + V ++ + L+ ++++G + + + + Sbjct: 98 FDLLESILRLQPVVANLNMSGLALDIRSIELVAAEGPPTREASSESQESSNLIKQLDNLL 157 Query: 138 --ILEKIHVKGGRIKIIDQES-DQVYFLSDLNLQISARFLNIISPLS-----IDSIKGSV 189 L++ V +I ++ + L + +S ++++ S Sbjct: 158 LRQLDEFSVTQSKIWYQSVSGENRRLDIDRLRWRNQGAHHLAEGVVSVAGTNLNALLVSA 217 Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 G+ + F + A A + ++ ++ I L L QP Y+ Sbjct: 218 NFVDHGSLLDVSGEFYVNAEEIAVTQWLTRYVKKETGIDSGKISLKSWLTLQHSQPRYAF 277 Query: 250 ------VFSVAGDFSKLLNLELSAKKSRLSG---NFKISDGNVRISRYKLQSILPNSSTD 300 S + L LE K G +R + + Sbjct: 278 VELLPSELSWTENGQHELTLESGILKLSPDGEGWKVSGHSLTLRTDEIEWPQLDIAFDWQ 337 Query: 301 EDN 303 Sbjct: 338 PQG 340 >gi|320155229|ref|YP_004187608.1| hypothetical protein VVM_00733 [Vibrio vulnificus MO6-24/O] gi|319930541|gb|ADV85405.1| possible exported protein [Vibrio vulnificus MO6-24/O] Length = 1295 Score = 45.6 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 86/303 (28%), Gaps = 29/303 (9%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89 F+++ + G +++ PSV + + ++ + + Sbjct: 38 NQFQDEIKTWVKQGTGLDVSISSVSGSWRNSHPSVALQGFEAFLPGEKKVNISVDEVHIE 97 Query: 90 AEFL-PLLSGEIRVFDMYIDQPHLNFY----LSSKGVSNWFQRKSTMDMIHNV------- 137 + L +L + V ++ + L+ ++++G + + + + Sbjct: 98 FDLLESILRLQPVVANLNMSGLALDIRSIELVAAEGPPTREASSESQESSNLIKQLDNLL 157 Query: 138 --ILEKIHVKGGRIKIIDQES-DQVYFLSDLNLQISARFLNIISPLS-----IDSIKGSV 189 LE+ V +I ++ + L + +S ++++ S Sbjct: 158 LRQLEEFSVTQSKIWYQSVSGENRRLDIDRLRWRNQGAHHLAEGVVSVAGTNLNALLVSA 217 Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 G+ + F + A A + ++ ++ I L L QP Y+ Sbjct: 218 NFVDHGSLLDVSGEFYVNAEEIAVTQWLTRYVKKETGIDSGKISLKSWLTLQHSQPRYAF 277 Query: 250 ------VFSVAGDFSKLLNLELSAKKSRLSG---NFKISDGNVRISRYKLQSILPNSSTD 300 S + L LE K G +R + + Sbjct: 278 VELLPSELSWTENGQHELTLESGILKLSPDGEGWKVSGHSLTLRTDEIEWPQLDIAFDWQ 337 Query: 301 EDN 303 Sbjct: 338 PQG 340 >gi|118590059|ref|ZP_01547463.1| hypothetical protein SIAM614_15380 [Stappia aggregata IAM 12614] gi|118437556|gb|EAV44193.1| hypothetical protein SIAM614_15380 [Stappia aggregata IAM 12614] Length = 1093 Score = 45.6 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 37/337 (10%), Positives = 88/337 (26%), Gaps = 23/337 (6%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI- 58 +R + ++ G R G + V+ G + Sbjct: 19 KRFRYIAAAVLIGLVGGLVI---LFATGPVRIPLLGSLLAYQGTRGQVQLSIGSASVDFT 75 Query: 59 LP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 P ++ D +D L+ LLSG++ + + +PH+ L Sbjct: 76 APDGINILVSDANVDIAGGSPVSISFPELTAPLNRDALLSGKVHFSSLNLTKPHVRIVLD 135 Query: 118 SKGVSNWFQRK----------STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167 D L + ++ ++ + + L Sbjct: 136 GGPAKLPEMGPLMEAVDRVSEVVDDQFARRGLSFVKIRNASFELAGSFPRRYSGIDADIL 195 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN---FPAKNKAISLKIQLF 224 + R + + ++ + + + + N + +Q Sbjct: 196 RDENRSIRAFARVAGNVSTWRLELARNAPLGANAKSIGVVVNGITLAELLGPSAKSVQGK 255 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 L P + L + K + V + + +L ++ + LS F+ + Sbjct: 256 GLGLPASAKIESRLTGDGKFVSANAVARIRNGWFQLGKTLVAFDDAALSLLFEAGQDAIE 315 Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321 I+ + NS + + E + N Sbjct: 316 ITSSHVIRG--NSRFFFTGSIRPTAGETPEWQINLNS 350 >gi|78357883|ref|YP_389332.1| hypothetical protein Dde_2842 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220288|gb|ABB39637.1| hypothetical protein Dde_2842 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 267 Score = 45.6 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 59/175 (33%), Gaps = 32/175 (18%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQAT----LIVGKKIAVKGGIKIH 57 ++++L + L ++ T+ L I+ E+ + K+++ G + Sbjct: 1 MKKLLALVAVLGVIIAGLVVTLVLSIN-----PIIEKAVNTFGPKLTQAKVSLSG-ADVS 54 Query: 58 ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + K + K++ + ++ L S I + + I P + + Sbjct: 55 FMSGEG-SLKGFVLGNPSGFQSDHAMKVDSVLVKINKDTLTSNTIVINLVEIVNPDIIYE 113 Query: 116 L-------------------SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI 151 S G + ++ + VI++K V+GG++ + Sbjct: 114 KSGRTDNFTALLNNVKKAVASGSGQTPAQEQPAESGSQRKVIIDKFVVRGGQVSL 168 >gi|57238852|ref|YP_179988.1| hypothetical protein Erum1210 [Ehrlichia ruminantium str. Welgevonden] gi|57160931|emb|CAH57836.1| putative exported protein [Ehrlichia ruminantium str. Welgevonden] Length = 877 Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 40/325 (12%), Positives = 103/325 (31%), Gaps = 35/325 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56 + L+ G + L+ P FI+W + A+ ++ + + I + Sbjct: 2 KFLVYFGSAILIFLLFLVVSPFFINWNSY------YASHVLKQIENISSDISVKGVNNVT 55 Query: 57 -HILPFPSVFFKDIRIDQKEDGSFE---SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112 ++ P + ++ ++ D S IE L ++ L LL +V+ + +D + Sbjct: 56 GSLV-LPKIVVNNLHVESGSDSSDYKSTILIERLELKISLLSLLLFSPKVYAVTVDGLSM 114 Query: 113 NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII-DQESDQVYFLSDLNLQISA 171 +S++ + + +++ I D+ S + I Sbjct: 115 PLGSLVDILSSFKKGS--------FQIGTFNIRNSVINTHYDRTSFSSKPIYIKEGNIKT 166 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 + +D K S + D + + + +S I+ Sbjct: 167 INDTKVISGLLDIGKNSYTMTADVSLDKTQYRIAGSVSSELTKVTLSGVSYENKFDGVIV 226 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 + + + + + S ++ LS N K++D ++ +K+ Sbjct: 227 AKGSNFAQFINDLSETN--------KTSVFSFINSQEEFSLSSNIKLTDKRFELTDFKVA 278 Query: 292 SILPNSSTDEDNKTKVSQDEENLLN 316 + N + + S + + + Sbjct: 279 TGSLNGLGNITCLSYSSCNIDIDFS 303 >gi|320103340|ref|YP_004178931.1| hypothetical protein Isop_1800 [Isosphaera pallida ATCC 43644] gi|319750622|gb|ADV62382.1| hypothetical protein Isop_1800 [Isosphaera pallida ATCC 43644] Length = 1166 Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 43/368 (11%), Positives = 101/368 (27%), Gaps = 57/368 (15%) Query: 8 GLGFLFSVVLVGAFTVPL-FIDWTDFREDFERQATLIV-GKKIAVKGGIKIHILPFP-SV 64 GL + ++ G + + +D + AT + ++ V+ ++ P + Sbjct: 50 GLALVMLTLIGGGWGLIRNLLDDQRLAQLVVAHATKYLPTSELKVE---RVDFEPLSDKI 106 Query: 65 FFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 I I+Q+ + + + LL G + + + QP L G Sbjct: 107 RLNRIEINQEAQRGRVETLRFPWIEVLHNPKALLEGHFQPIKVSLAQPRLRLARQQDGRW 166 Query: 123 NWFQRKSTMDMIHNVILE-KIHVKGGRIKIIDQESDQVYFLSDLNLQIS-----ARFLNI 176 N + + + +I ++GG +++ D S + L + + I + L Sbjct: 167 NVQTLLADPWPGMPMKVWPEIEIQGGVVELTD-ASGVIGLLDNAQVVIKRVSRQSPDLMS 225 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS------------------ 218 + + S+ G + N ++++ Sbjct: 226 YRIAARGRVVDSIELHGQFDKSNGAVVISGIIRGLKLSESLQNCLPSDLRMAFRRSRLEG 285 Query: 219 -------LKIQLFPLAYPIIIDLFG--------NLFWNEKQPIYSGVFSVAGDFSKLLNL 263 ++++ P+ P G NL + Y + + Sbjct: 286 GRLDLEIVRLERPPIWGPTKAQPPGKPGDKASLNLNPIQGPWRYELTARLREASLREDPA 345 Query: 264 ELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ-DEEN---LLNFSE 319 K G + S ++ + + + E F Sbjct: 346 PFRLTDVTADLQLKTGWGRLDASGWRG-----PTRVRLTGEFGIDLTAPEPTFEDFKFDL 400 Query: 320 NGAESMHD 327 N + D Sbjct: 401 NVIDLSLD 408 >gi|238792993|ref|ZP_04636622.1| hypothetical protein yinte0001_32880 [Yersinia intermedia ATCC 29909] gi|238727593|gb|EEQ19118.1| hypothetical protein yinte0001_32880 [Yersinia intermedia ATCC 29909] Length = 1249 Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 50/407 (12%), Positives = 119/407 (29%), Gaps = 55/407 (13%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL + DFR + Q I G+++ + G + I + + Sbjct: 206 ALFAKPLLPELPDFRLPLDLQIKEISGQQLRLTGDTDVVISSLLLQASTQENQITLDKLE 265 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVF-------DMYIDQP---HLNFYLSSKG 120 I + G L+ +++ + + + + LN L+ G Sbjct: 266 IKSPQGGLSAQGDATLTDNWPVSMVINSALNIEPLKGEKVKLTVGGALREKLNVALNLSG 325 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + T + L + ++ +++ + Y + +L ++++ + + + Sbjct: 326 PVSAQLDAETALAQAGLPL-VLTLQSKQLRWP-LSGEPQYQIDNLKMRLNGQATDYALSI 383 Query: 181 SIDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDL 234 D +G GN + ++ N ++ + +++ ++ L Sbjct: 384 RSDFKGTDLPPAVFTLDGKGNVEQFNLT-RLRLAALQGNTDLTGVVDWSKAISWNSVLTL 442 Query: 235 FG---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD--- 280 G W E G G L L+ + K++R++ ++ Sbjct: 443 SGINTAKQWPEWPAKLDGKIVTRGSIHGGSWQLQVPELALDGNVKQNRVTARGSLTGNAA 502 Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKK 340 G I L + D + L+ + + + L + K Sbjct: 503 GQWHIPGINLALGR--NKLDVKG----DLSDTWQLDANVDAPQLDGALPGLGGVVKGALK 556 Query: 341 NKN--------DDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 + DL +Q+ D + + G I Sbjct: 557 LRGNLKAPQLLADLTASRLQWQELTINRIKIDGDVRSTDQIQGQLAI 603 >gi|56461258|ref|YP_156539.1| hypothetical protein IL2158 [Idiomarina loihiensis L2TR] gi|56180268|gb|AAV82990.1| Uncharacterized conserved secreted protein [Idiomarina loihiensis L2TR] Length = 582 Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 50/155 (32%), Gaps = 17/155 (10%) Query: 2 LRRVLI---GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58 ++R +I GL VL+ + + E + G ++ ++ ++ Sbjct: 1 MKRSIIRWPGLAVFAGFVLL-LVAISWLFLDAIIKVTLEHTLGRLNGAEVNIE-RVEHSW 58 Query: 59 LPFPSVFFKDIRIDQKE-DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 +P S+ I++ + ++ S ++ G + + + +N Sbjct: 59 VP-LSLTLAGIQVTDPNAPKNNRVQVGEASADISPTEIVLGRTLIEQLTMTGVRVNQPRE 117 Query: 118 SKG----------VSNWFQRKSTMDMIHNVILEKI 142 S+G V NW + ++ I Sbjct: 118 SEGDVYVMPDQEDVQNWASQSWDKLTTSLPSVDDI 152 >gi|42524348|ref|NP_969728.1| hypothetical protein Bd2946 [Bdellovibrio bacteriovorus HD100] gi|39576557|emb|CAE80721.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio bacteriovorus HD100] Length = 651 Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 33/295 (11%), Positives = 82/295 (27%), Gaps = 18/295 (6%) Query: 12 LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71 + V F D R+ E VG ++ + ++ S+ + I + Sbjct: 26 FVIICAVIGLYFHFFFD-AHLRKGMEWAGYKAVGAEVNIA-KVETSFF-EASLRIQGIEV 82 Query: 72 DQKEDGS-FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 E + I + + LL ++ V + ++Q + G + Sbjct: 83 TDAEKPTHNSLNIGDIRFSMLWDALLRAKVVVNEAVVEQIAFGVKRARPGRV-APPEPVS 141 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQ----------ESDQVYFLSDLNLQISARFLNIISPL 180 + L++ + + + D +D L L + ++ + Sbjct: 142 NEPGFADKLKEQAISEAQQQAGDSVLGDVIAMLTGTDANVQLQKLQDSLPSKAMLESFEK 201 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 + + + + A K K K +L + Sbjct: 202 DLKAKQATWDARMKSLPQGKDIEALNKRLNSIKYKDFKTPQELQSSLQELDKVFK---DG 258 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 + G + K L + + ++ + K + + RI + +S+ Sbjct: 259 DAMYKQVQGAGNDLQKDLKALEAQYKEIEKQVKTDIKSLEQHFRIPKLDAKSMSM 313 >gi|30248933|ref|NP_841003.1| putative signal peptide protein [Nitrosomonas europaea ATCC 19718] gi|30138550|emb|CAD84840.1| putative signal peptide protein [Nitrosomonas europaea ATCC 19718] Length = 1324 Score = 45.3 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 34/295 (11%), Positives = 89/295 (30%), Gaps = 29/295 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR+ L G+ + + + F I + A+ G + G + Sbjct: 22 LRKWLAGIATVVVLAVTSGFY--WLIFTSAGLHWLLMIASQATGGALTFSG-----VNGS 74 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 I + D +++E ++ R + LL+G++ + + I ++ +S+ Sbjct: 75 LHHTVHAGMIAYQSDELT-ARVEDMTFRWQPRQLLTGKLHIETLMIRSVEVH-SAASEQE 132 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + + ++EK+ ++ + + ++DL L++ + Sbjct: 133 EEPVTLPENLSLPVDAVIEKLGIRSLK-RYTLGNDQPDIVMTDLALRLDSDGKRHHLQTL 191 Query: 182 IDSIK-------------GSVIAEGTG---NFDNKRSAFKITANFPAKNKAISL---KIQ 222 ++ N+ N + A + A +L + Sbjct: 192 ALGLEWGKIAGNLEIGIHPPFDLASQLVFYNWANVANTSSEPAGYAAVRLGGNLQQIQAA 251 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 L + + + P+ V+G + + +L S Sbjct: 252 LTIADRKLAGKGNFTIHPFDALPLLEANLVVSGLDLNVFSSDLPKADLSFSSQLA 306 >gi|295133927|ref|YP_003584603.1| hypothetical protein ZPR_2082 [Zunongwangia profunda SM-A87] gi|294981942|gb|ADF52407.1| conserved hypothetical protein [Zunongwangia profunda SM-A87] Length = 1670 Score = 45.3 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 48/405 (11%), Positives = 120/405 (29%), Gaps = 37/405 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQA----TLIVGKKIAVKGGIKIH 57 LR+ L + + +L+ + LFI + + ++ + ++ Sbjct: 8 LRKALRITLRILAGILIFFVLLILFIRSPWGQNIIVNKVVSTIQNKTNTEVEID---RLF 64 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYL 116 I ++ + + ++ K+ L P++ G V D+ + N Y Sbjct: 65 ITFGGAISLEGLYLEDKKG-DTLVYAHNLEANIPIWPIIKGSGFGVNDLDLKGLKANIYR 123 Query: 117 -SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 S N+ ++ V+ +D L ++ L + + Sbjct: 124 EDSISGYNFQFLVDAFAASDTTNTQQTKVQDTTSSSMDISIG-DVNLQNIILNYNDQVAG 182 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 + + L + + ++ N + + ++ + +L ++ + Sbjct: 183 MEAQLKLGELDVAMRKTDLKNMQFEVADASLSNTMIVYRQLKTLPPGEDTETPMPLVVVD 242 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GNFKISDGNVRISR----YKL 290 N G + + E A+ ++ GN++I N+ + R ++ Sbjct: 243 ---RLNLNNVNAKYQSEPGGILADVHIPEFIAEMPKMDLGNYEIQFNNISLKRSNVLLRM 299 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF-----------FEEEEK 339 Q+ S + K + + N + F Sbjct: 300 QTKTAQSQPQDSIKNDTTGFVWPAWKINVK--RIDLAQNNIAYIVDSAKIEQRQFNPNAL 357 Query: 340 KNKNDDLKKDDIQYSVNKKEEKDNSHDKE-----NQENFSGDKMI 379 K +N LK +I + +K N + + FS + + Sbjct: 358 KFRNLRLKTGNIALADHKLNADINQVSFQEASGLDLREFSTEITL 402 >gi|187736128|ref|YP_001878240.1| hypothetical protein Amuc_1639 [Akkermansia muciniphila ATCC BAA-835] gi|187426180|gb|ACD05459.1| hypothetical protein Amuc_1639 [Akkermansia muciniphila ATCC BAA-835] Length = 527 Score = 45.3 bits (105), Expect = 0.018, Method: Composition-based stats. Identities = 38/372 (10%), Positives = 100/372 (26%), Gaps = 44/372 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLF----IDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58 +R LIGL L + ++ + +F + + G ++ + G + + Sbjct: 52 KRFLIGLCILVLLAAGALAGTYMYRLTSFNTEEFAGRLQADLSAAWGGEVKISG-MAVD- 109 Query: 59 LPFPSVFFKDIRIDQKEDG-SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 ++ IRI ED +EG+S +PL G+I+ + + + + Sbjct: 110 --GLTMKASRIRISFPEDSCLSFVAMEGISGEISAVPLFMGKIKGESLNVSRAVVGLRP- 166 Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 G + ++ ++ + L++ Sbjct: 167 --GFVKFAVPQTKRELPFVFR----------------------RYTAPRLEVGYAHGTEE 202 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 L + + AE + + + I + + +I++ G Sbjct: 203 FTLERNGAPFYMTAEAYIRTSGNGPEPEYVLDLSQQKLKIKGWPLMGVDSGSVILNGSGV 262 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297 + G + + +F+ + + L S+L + Sbjct: 263 KQLTFSGFLDKGRLLNKPTDLSPFMITGNFLLGT---DFRHQAWTLTGKNFDLASLLGDD 319 Query: 298 STDE----DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353 + + + + E L+F+ + K ++ ++ Sbjct: 320 FSSLLKVQTGEQEGDEKHELKLDFALP---VTTEQKRPSLKGYSGSVIKATMIRLPVLRL 376 Query: 354 SVNKKEEKDNSH 365 Sbjct: 377 LAAMTARNTEIR 388 >gi|213029573|ref|ZP_03344020.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213580365|ref|ZP_03362191.1| AsmA family protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 102 Score = 44.9 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 4/33 (12%), Positives = 14/33 (42%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58 DW + ++ + + + A++G + + Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVW 60 >gi|311746029|ref|ZP_07719814.1| hypothetical protein ALPR1_06355 [Algoriphagus sp. PR1] gi|126576245|gb|EAZ80523.1| hypothetical protein ALPR1_06355 [Algoriphagus sp. PR1] Length = 1648 Score = 44.9 bits (104), Expect = 0.021, Method: Composition-based stats. Identities = 47/380 (12%), Positives = 105/380 (27%), Gaps = 53/380 (13%) Query: 18 VGAFTVPLFIDWTDFREDFERQA----TLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73 V + LFI + +A G + ++ ++ I +++ + I Sbjct: 2 VLILALILFIRSPWGQGIIVDKAVTFLEDKTGADVEIE---RLFITFSGNIYLDNFYISD 58 Query: 74 KEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSK-GVSNWFQ----- 126 + L F+PL+ G I V + D + + GV N+ Sbjct: 59 VNG-DTLAYSRELEAGIAFVPLIKNGAIHVSNFEWDGLKVRVKRPEESGVYNFQFIIDAF 117 Query: 127 ----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD--QVYFLSDLNLQISARFL 174 ++ L I ++ I+ D+ L D L I L Sbjct: 118 SSGEEEVAETPPEEESPQLDITLSPISLRNFDIQFKDEVLGIEASILLGDFELAIPELDL 177 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 N + + S + K L + L Y +D Sbjct: 178 NKYEFGIGSVLLSDTEIKYIQTKPLAESEETEEESIMPLIKLDELTLNNINLNYENQVDQ 237 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR----------------------- 271 + + I +A ++ + L+ Sbjct: 238 QQADVFIQAFSIGMPKLDLAQQIVEINEVSLAESSILYHDFSPSPATQENTSASLETEEF 297 Query: 272 LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331 ++K++ + +S L+ + + K + + + L + G++ D + Sbjct: 298 AWPDWKVNLSKITLSENNLEYKTVDLPSK---KGEFNPEVILLNQLNLEGSDISLDESSA 354 Query: 332 DFFEEEEKKNKNDDLKKDDI 351 E+ + + + D+ Sbjct: 355 KLLIEKFQLQEGSGFELKDL 374 >gi|188535059|ref|YP_001908856.1| Conserved hypothetical protein (DUF490) [Erwinia tasmaniensis Et1/99] gi|188030101|emb|CAO97987.1| Conserved hypothetical protein (DUF490) [Erwinia tasmaniensis Et1/99] Length = 1257 Score = 44.9 bits (104), Expect = 0.022, Method: Composition-based stats. Identities = 40/300 (13%), Positives = 87/300 (29%), Gaps = 19/300 (6%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL D +F + I+G+++ + G I + + + + Sbjct: 214 ALFAKPLLPDLPEFILPLDVNVQQILGEQLRITGDSDIAVNRLLLKAKTEHNQLQLQTLD 273 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 +D + LS L+G I + + ++ + + S Sbjct: 274 VDSPQGQLNAQGGATLSGSWPMSFTLNGAINLDPLKGEKIKMTLDGGLRDTLKLALNLSG 333 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 ++ V G I + Q + L+ +A+F S + + Sbjct: 334 PVRAQLDADSQLAVAGLPINMRLQSPQLRW-----PLEGAAQFQANNVNFSFNGKATDYV 388 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNLFWNEKQPIYSG 249 + T K + L A DL + W++ + Sbjct: 389 MSLKAALQGEGVP-PATLTLDGKGNVEQFSLDKLRLAALQGNTDLTALVDWSK-AISWHS 446 Query: 250 VFSVAGDFSKLLNLELSA---KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 +++G + + A K G+ +R+ KL+ + N++ D Sbjct: 447 ELTLSGINTAKQYPDWPAKLEGKITTRGSLYGGSWQMRVPELKLKGNVRNNAVSADGSLS 506 >gi|324115151|gb|EGC09115.1| adhesin HecA family protein [Escherichia fergusonii B253] Length = 1260 Score = 44.5 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 35/290 (12%), Positives = 79/290 (27%), Gaps = 17/290 (5%) Query: 21 FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSF 79 +P +R + + G + + F P++ +DI D K+ G Sbjct: 25 LALPHL---DHWRPEILNKIESATGVPVD-ASQLSASWQTFGPTLEARDIHADLKDGGE- 79 Query: 80 ESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQRKSTMDMIHNV 137 ++ +++ + LL + D+ Q G S + + Sbjct: 80 -FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPIEPGDGGEGLEGSQLSDLFLR 138 Query: 138 ILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193 + ++ + I + L+ LN Q R +S S+ G + Sbjct: 139 QFDHFDLRDSEVSFITLSGQRAELAIPQLTWLNDQARHRAEGQVSLSSLTGQHGVMQVRM 198 Query: 194 TG-NFDNKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250 + D +I + L +Q L G + ++ I + Sbjct: 199 DLQDNDGLLKDGRIWLQADDIDVKPWLGKWMQDNIALETAQFSLEGWMTIDDGDIIGGDI 258 Query: 251 -FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 G + L+ + + S + + + Sbjct: 259 WLKKGGASWLGEGKTHTLSVDNLTAHITREQPGWQFSIPDTRITMDDKPW 308 >gi|218550529|ref|YP_002384320.1| hypothetical protein EFER_3223 [Escherichia fergusonii ATCC 35469] gi|218358070|emb|CAQ90716.1| conserved hypothetical protein; putative membrane protein, putative transporter [Escherichia fergusonii ATCC 35469] Length = 1263 Score = 44.5 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 35/290 (12%), Positives = 79/290 (27%), Gaps = 17/290 (5%) Query: 21 FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSF 79 +P +R + + G + + F P++ +DI D K+ G Sbjct: 28 LALPHL---DHWRPEILNKIESATGVPVD-ASQLSASWQTFGPTLEARDIHADLKDGGE- 82 Query: 80 ESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQRKSTMDMIHNV 137 ++ +++ + LL + D+ Q G S + + Sbjct: 83 -FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPIEPGDGGEGLEGSQLSDLFLR 141 Query: 138 ILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193 + ++ + I + L+ LN Q R +S S+ G + Sbjct: 142 QFDHFDLRDSEVSFITLSGQRAELAIPQLTWLNDQARHRAEGQVSLSSLTGQHGVMQVRM 201 Query: 194 TG-NFDNKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250 + D +I + L +Q L G + ++ I + Sbjct: 202 DLQDNDGLLKDGRIWLQADDIDVKPWLGKWMQDNIALETAQFSLEGWMTIDDGDIIGGDI 261 Query: 251 -FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 G + L+ + + S + + + Sbjct: 262 WLKKGGASWLGEGKTHTLSVDNLTAHITREQPGWQFSIPDTRITMDDKPW 311 >gi|238757548|ref|ZP_04618733.1| hypothetical protein yaldo0001_30420 [Yersinia aldovae ATCC 35236] gi|238704310|gb|EEP96842.1| hypothetical protein yaldo0001_30420 [Yersinia aldovae ATCC 35236] Length = 1249 Score = 44.5 bits (103), Expect = 0.028, Method: Composition-based stats. Identities = 41/345 (11%), Positives = 106/345 (30%), Gaps = 47/345 (13%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL + DFR + Q I G+++ + G + I + + Sbjct: 206 ALFAKPLLPELPDFRLPLDLQIKSITGQQLRLTGDTDVLINSLLLQASTQENHIKLDALE 265 Query: 71 IDQKEDG----SFESKIEGLSMRAEFLPLLSGEI-RVFDMYID-----QPHLNFYLSSKG 120 I + G + + + L+ E + + + + L L+ G Sbjct: 266 IKSPQGGLSAHGEATLADKWPLDIVINSALNIEPLKGEKIKLTVGGDLRDQLTVALNLSG 325 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + T + L + ++ +++ + Y ++ L ++++ + + + Sbjct: 326 PVSAQLDAQTSLAQAGLPLA-LTLQSKQLRWP-LAGEPQYQINHLRMRLNGQATDYALSI 383 Query: 181 SIDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDL 234 D +G GN + ++ N ++ + +++ ++ L Sbjct: 384 RSDFNGTDLPPALFTLDGKGNVEQFSLT-RLRLAALQGNTDLTGVVDWRKAVSWNSVLTL 442 Query: 235 FG---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD--- 280 G W + G G L L+ + K++R++ ++ Sbjct: 443 SGINTTKQWPDWPAKLDGKIVTRGSLHGGSWQLQVPELTLDGNVKQNRVTARGSLTGNAA 502 Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 G I L + D ++ L+ + + + Sbjct: 503 GQWHIPGINLALGR--NRLDVKG----DLNDHWQLDANIDAPQLD 541 >gi|325277899|ref|ZP_08143443.1| hypothetical protein G1E_29627 [Pseudomonas sp. TJI-51] gi|324096970|gb|EGB95272.1| hypothetical protein G1E_29627 [Pseudomonas sp. TJI-51] Length = 357 Score = 44.5 bits (103), Expect = 0.029, Method: Composition-based stats. Identities = 41/359 (11%), Positives = 106/359 (29%), Gaps = 18/359 (5%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R LIGL L ++++ +P + R+ + + + V + + Sbjct: 6 RWPLIGLASLVALLVALHLALPYLV-----RDYLNDKLADMGDYRGHVA-DVDLAWWRG- 58 Query: 63 SVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + +RI + + + + L+ + V + +QP LNF Sbjct: 59 AYRINGLRIVKTSGKVPVPLLDAPVIDLSVSWHSLIYDKAVVAKVIFEQPELNFVDGGNK 118 Query: 121 VSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL-- 174 ++ + + + + L+++H+ G + + S+ L L + L Sbjct: 119 QASQTGQGTDWRQQLEKLLPITLDEVHIDNGTLTFRNFNSNPPVNLKATRLDATISNLTN 178 Query: 175 -NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 S +G+ + G +++ + + + + + I+L L Sbjct: 179 VRDKQGRRDASFEGTALIAGNAKVESRATFDPFSDFDDFEFRLRATGIELRNLND--FAS 236 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 +G ++ L + + + R +++ Sbjct: 237 AYGKFDFSAGHGDVVIEAQAENGRLNGYIKPLLRDVDVFDWQQDVENKDKGFFRSVWEAL 296 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 + S T N+ K L+ S + + N ++ + Sbjct: 297 VGASETVLKNQPKNQFATRVELSGSVHKQNISAFEAFLQILRNGFIQAFNARYEQPAPK 355 >gi|296122562|ref|YP_003630340.1| hypothetical protein Plim_2315 [Planctomyces limnophilus DSM 3776] gi|296014902|gb|ADG68141.1| hypothetical protein Plim_2315 [Planctomyces limnophilus DSM 3776] Length = 1089 Score = 44.1 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 9/152 (5%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVP--LFIDWTDFREDFERQATLIV-GKKIAVKGGIKIH 57 MLR G + + + GA F RE+ RQ I + G Sbjct: 1 MLRTFRWIFGIVVLLGIAGAGGAGALYFRSDAMLREEALRQFARACPDSIITLDG---AR 57 Query: 58 ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYL 116 + +++I + + I L + + L + I + + + QPH++ Sbjct: 58 FDFSGRIRLFNLQITPEGQELPLAVIPELIVSLDREQLSQHQLIVIEQLRLIQPHIHLKR 117 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR 148 S+ G N+ + +I ++ GR Sbjct: 118 SADGHWNFESLALARQSAMAMP--EIFIESGR 147 >gi|327482017|gb|AEA85327.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 962 Score = 44.1 bits (102), Expect = 0.035, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 77/251 (30%), Gaps = 32/251 (12%) Query: 73 QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------- 124 DG ++E L + L L ++ + + + G NW Sbjct: 275 DSPDGRKLVRLERLELSETTLDLARRQVSIGKLRSRHLETWAAREADGELNWQKLFAAGP 334 Query: 125 ----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS--DLNLQISAR 172 T V+L+ ++ R+ + D+ D L LNL IS Sbjct: 335 SPSNADEQIADSETQTAGEPWQVLLQDAQLRDYRVHLADRVPDDEVQLELGPLNLDISDF 394 Query: 173 FLNIISPLSID-----SIKGSVIAEGTGNFDNKRSAF-------KITANFPAKNKAISLK 220 P S+ +G++ A+G + + + +SL+ Sbjct: 395 DSLAARPFSLKLDTGVGRQGALQAQGQLQLNPISGQLAVTTRDIDLRIAQAYLSPLVSLE 454 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280 ++ L+ + +DL G + + + ++ +LSG Sbjct: 455 LRSGMLSSELQVDLQGTEPLAFSVRGSVDATQLHTLDTINNRDFVKWQRLQLSGLDYQHP 514 Query: 281 GNVRISRYKLQ 291 ++ I R L+ Sbjct: 515 RSLDIERIDLR 525 >gi|317049729|ref|YP_004117377.1| hypothetical protein Pat9b_3531 [Pantoea sp. At-9b] gi|316951346|gb|ADU70821.1| protein of unknown function DUF490 [Pantoea sp. At-9b] Length = 1256 Score = 44.1 bits (102), Expect = 0.037, Method: Composition-based stats. Identities = 40/358 (11%), Positives = 101/358 (28%), Gaps = 56/358 (15%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 ++VLIG G ++ + G + +KG +P Sbjct: 5 KKVLIGFGIFLLLIFGSVAFLIGTTP----------------GLHLLLKGAD--RWVPGL 46 Query: 63 SV-----FFKDIRIDQKEDGSFESKIE--GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 S+ ++D+ + + ++ + LL + V D+ + + Sbjct: 47 SIDKVEGGWRDLTLSGVKYEMPGVSVDAGRFHLALRLNCLLHSAVCVNDIALQDVSVVVD 106 Query: 116 LSS------------KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 G +N + + V I ++D + + Sbjct: 107 SKKMAPASQAAPEPESGTTNLSTPYPITLSKVGLHNINVKVDDTAISLLDFTTGLHWQDR 166 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN---------KRSAFKITANFPAKN 214 L L + +I+ + + + ++ F + Sbjct: 167 ALTLTPTHIESLLIALPKAAKVVDEQVVQPKVQQPQPDEKPLGETLQAMFAQPLLPALPD 226 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274 + L I + L+ + L G+ + + + +++ + + SG Sbjct: 227 FQLPLDITVQELSGK-QLRLTGDTDVTINSLLLKAQTNDRHLQLETFDVDSTQGQVNASG 285 Query: 275 NFKISD---------GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 ++D G V + K + I N S ++ K++ + + + A Sbjct: 286 EATLADNWPVNFALNGAVNLDPIKGEKIKLNLSGALRDELKLALNLSGPVQAQLDAAA 343 Score = 40.6 bits (93), Expect = 0.40, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 88/309 (28%), Gaps = 37/309 (11%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL DF+ + + GK++ + G + I + + Sbjct: 214 AMFAQPLLPALPDFQLPLDITVQELSGKQLRLTGDTDVTINSLLLKAQTNDRHLQLETFD 273 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 +D + S L+ L+G + + + ++ LN Sbjct: 274 VDSTQGQVNASGEATLADNWPVNFALNGAVNLDPIKGEKIKLNL-------------SGA 320 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + + L ++ D + L+L++++ L + + Sbjct: 321 LRDELKLALNLSGPVQAQL---DAAAQPAAVGLPLSLKLTSPQLRWPLTGPVQYQADKLD 377 Query: 191 AEGTGNFDNKRSAFKIT-----ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW----- 240 + G + + + +Q F L + L GN+ Sbjct: 378 YQFKGKATDYVMSLRTAVKGEGVPPADIALDGKGNVQQFSLDKLRVAALQGNIDLTALVD 437 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSA---KKSRLSGNFKISDGNVRISRYKLQSILPNS 297 K + +++G + E A K G+ + + + +L+ + N+ Sbjct: 438 WSKAISWHSELTLSGINTAKQYPEWPAKLEGKIATRGSLYGGSWQLSVPQLQLKGNVKNN 497 Query: 298 STDEDNKTK 306 + D Sbjct: 498 AVSADGSLT 506 >gi|26991256|ref|NP_746681.1| hypothetical protein PP_4572 [Pseudomonas putida KT2440] gi|24986310|gb|AAN70145.1|AE016654_2 conserved hypothetical protein [Pseudomonas putida KT2440] Length = 357 Score = 44.1 bits (102), Expect = 0.038, Method: Composition-based stats. Identities = 38/360 (10%), Positives = 99/360 (27%), Gaps = 20/360 (5%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R L+GL L +++ +P + R+ + + + V + + Sbjct: 6 RWPLVGLASLIVLLVALHLALPYLV-----RDYLNDKLADMGDYRGQVA-DVDLAWWRG- 58 Query: 63 SVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + ++I + + + + L + V ++ P LNF Sbjct: 59 AYQINGLKIVKTTGKVPVPFLDAPLIDLSVSWHSLWYDKAVVAEVTFVHPELNFVDGGSK 118 Query: 121 VSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 ++ + + + + L ++ + G + + S L L S R L Sbjct: 119 QASQTGQGTDWRQQLEKLLPITLNEVRIDNGVLTFRNFNSKPPVDLKATRLNASIRNL-- 176 Query: 177 ISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 + + + EGT + + T + + +++ + + D Sbjct: 177 -TNVRDQQGRRDASFEGTALIAGDAKVESRATFDPFSDFDDFEFRLRATGIELRKLNDFA 235 Query: 236 ---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 G +N L + + + R ++ Sbjct: 236 SAYGKFDFNAGHGDVVIEAQAENGRLNGYIKPLLRDVDVFDWQQDVEEKDKGFFRSVWEA 295 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 ++ + T N+ K L+ S + + N ++ + Sbjct: 296 LVGATETVLKNQPKNQFATRVELSGSVRQQDISAFEAFLQILRNGFVQAFNARYEQPAPK 355 >gi|303327680|ref|ZP_07358120.1| LigA [Desulfovibrio sp. 3_1_syn3] gi|302862041|gb|EFL84975.1| LigA [Desulfovibrio sp. 3_1_syn3] Length = 1073 Score = 44.1 bits (102), Expect = 0.041, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 104/320 (32%), Gaps = 36/320 (11%) Query: 40 ATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE 99 + G V+ + + +LP PS+ + + K+ + ++R +FL LL GE Sbjct: 57 ISARTGLIFCVE-AVDVVLLPVPSIAVSNASVRGKDLH---FSVAYATLRPDFLALLRGE 112 Query: 100 IRVFDMYIDQPHL-NFYLSSKGVSNWFQRKSTMDMIHNVILE---KIHVKGGRIKIIDQE 155 ++ + +P L G + + + L ++ + G ++I Sbjct: 113 FVPRNISLLRPKLGGALPLPLGDMDALAARLRGNGGGLPDLPDGCRMTIVQGEAELI-GT 171 Query: 156 SDQVYFLSDLNLQISARFLNIIS------------PLSIDSIKGSVIAEGTGNFD----- 198 LS L ++ ++S + + +AEG + Sbjct: 172 DGAHLQLSGLQCRLDTEAPAVVSGRVHLGAVLLRRQGAPLIRLDNFLAEGESDLRTPLTA 231 Query: 199 --NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS--GVFSVA 254 R + + + ++L +Q + DL G L + + +S G ++ Sbjct: 232 TPKLRLSGSLRWPPFLERFNMALDLQGGATGWTARADLRGELAKDRESLPFSVAGTAAMR 291 Query: 255 GD----FSKLLNLELSAKKSRLSGNFKISDGNVRISR-YKLQSILPNSSTDEDNKTKVSQ 309 G + L LEL LSG ++ + + L L ++ Sbjct: 292 GSEPIVNLERLRLELGPDSGELSGTLRLPGALQNKEQDFSLDGRLLLHRASLTQWLGFAR 351 Query: 310 DEENLLNFSENG-AESMHDL 328 + L + + + D Sbjct: 352 NLAPGLQLALDNLTDGNLDF 371 >gi|198276057|ref|ZP_03208588.1| hypothetical protein BACPLE_02241 [Bacteroides plebeius DSM 17135] gi|198271686|gb|EDY95956.1| hypothetical protein BACPLE_02241 [Bacteroides plebeius DSM 17135] Length = 641 Score = 44.1 bits (102), Expect = 0.041, Method: Composition-based stats. Identities = 40/356 (11%), Positives = 99/356 (27%), Gaps = 45/356 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFID---WTDFREDFERQATLIVGKKIAVKGGIKIHI 58 +RR+LI G ++L+ E + G ++ + Sbjct: 1 MRRILIYTGAGLLLLLLLLAGGLWIFRNHILNRMAERRIAKLEQRYGLEVNYD---DLRF 57 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 +F + + E + + F LL G + V D+ +D ++F + Sbjct: 58 EGTGRLFLNGLSVV-PEKRDTLLTLRSATFNLGFWQLLKGNVEVMDVALDGLTVDFVKEN 116 Query: 119 -KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARF 173 + ++ R + + R++ + ++ L+ L+++ Sbjct: 117 HQANYDFLFRSRSEGEKETERASEKVGYDKRVQTLLSGMFRLLPSEGRLTRLHVRERKDS 176 Query: 174 LNIIS-PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 ++ ++ T + ++ A + +S+ IQ L P Sbjct: 177 DSVSLYVPEFCIENHQFRSQLTFVEEGHTQHWETEGEINASERRVSVSIQAPELTVPY-- 234 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 + L F+ + K++ L ++ + G K+ + R L Sbjct: 235 -IRRRLGAEVAFDRLWLSFTQQKEDEKVILL----GQTEVDG-LKVFHRRLSPERINLDR 288 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD------LNETDFFEEEEKKNK 342 + + D N+ F ++ Sbjct: 289 GKLD------------------FQLNVESHALELDSCSTIRFNDLQFHPYLRVESP 326 >gi|213023197|ref|ZP_03337644.1| putative assembly protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 171 Score = 43.7 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 7/80 (8%), Positives = 25/80 (31%), Gaps = 7/80 (8%) Query: 248 SGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307 + + G +E + +L ++ + + + L + + + +V Sbjct: 4 QLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA----NDSSLTGHVQV 56 Query: 308 SQDEENLLNFSENGAESMHD 327 + E+ ++ D Sbjct: 57 TLAEQPEWQIDLRSSKLNLD 76 >gi|170723034|ref|YP_001750722.1| hypothetical protein PputW619_3872 [Pseudomonas putida W619] gi|169761037|gb|ACA74353.1| conserved hypothetical protein [Pseudomonas putida W619] Length = 357 Score = 43.7 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 35/330 (10%), Positives = 86/330 (26%), Gaps = 13/330 (3%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMR 89 R+ + + + V +++ + ++I + + + Sbjct: 30 VRDYLNDKLADMGEYRGQVT-DVELAWWRG-AYQINGLKIVKTSGKVPVPLLDAPLIDLS 87 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM----IHNVILEKIHVK 145 + L V ++ +P LNF ++ + + + + L + + Sbjct: 88 VSWHALWYDHAVVAEVTFVRPVLNFVDGGNKQASQTGQGTDWRQQLEKLLPITLNDVRIN 147 Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK 205 G + + S L L + R L + S A+ + R + Sbjct: 148 DGTLTFHNFNSKPPVDLKATRLDANIRNLTNVRDEKGRRDA-SFEAKA-LLLGDARVESR 205 Query: 206 ITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDFSKLLN 262 T + + +++ + + D G +N Sbjct: 206 ATFDPFSDFDDFEFRLRATGMELRRLNDFASAYGKFDFNAGHGDVVIEAQAENGRLNGYI 265 Query: 263 LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA 322 L + I D N R ++++ S T N+ K L+ S + Sbjct: 266 KPLLRDVDVFNWQQDIEDKNKGFFRSVWEALVGASETVLKNQPKNQFATRVELSGSVHQQ 325 Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 + N ++ Sbjct: 326 NISAFEAFLQILRNGFVQAFNARYEQPAPD 355 >gi|71082775|ref|YP_265494.1| membrane-bound pili assembly protein Fimc [Candidatus Pelagibacter ubique HTCC1062] gi|71061888|gb|AAZ20891.1| possible membrane-bound pili assembly protein Fimc [Candidatus Pelagibacter ubique HTCC1062] Length = 239 Score = 43.7 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 20/188 (10%), Positives = 71/188 (37%), Gaps = 18/188 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++ L + + + FI + E + + +++++K + I L Sbjct: 3 MKKFLSIITIFAL----SFYILVEFIGDRLIKNILEDNISSSLNREVSIK-KLSIDYLSG 57 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL----- 116 +I+I K+ ++++ + + + + S +I + D+ ++ +LN+Y Sbjct: 58 -EARANNIKILNKKFDGNLAEVDFVKVNLDTFSIFSNDILINDVQLNNINLNYYFKFSDR 116 Query: 117 -----SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII--DQESDQVYFLSDLNLQI 169 + + + ++ + K + ++ D + ++ + ++D+N + Sbjct: 117 ITSDNLRNLQQDLEFKNTDSQSSKYFNIKNLDAKNINLAVLSSDFDFEKTFSINDMNFKD 176 Query: 170 SARFLNII 177 + Sbjct: 177 IGNTKDSK 184 >gi|222150012|ref|YP_002550969.1| hypothetical protein Avi_4089 [Agrobacterium vitis S4] gi|221736994|gb|ACM37957.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 1404 Score = 43.7 bits (101), Expect = 0.045, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 79/255 (30%), Gaps = 10/255 (3%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R + GL L ++++V V + F DF + IAV G I L Sbjct: 13 RILAYGLLVLAAMLVVALTLVGTTQFGSRFIGDFVASLMSKPNRIIAVDG---ISGLLDG 69 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-NFYLSSKGV 121 + I + +I+ LS+ L L+S + L L ++ Sbjct: 70 HLRVDTITVSDANGA--YGRIQDLSIDWSPLALMSRRFEASQIKAASLTLARKPLPAEET 127 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS-DLNLQISARFLNIISPL 180 + + + ++ +E++ V R++ + L ++ + + Sbjct: 128 ATEASSSNGFSLPVDIRIERVSVPEIRLEQPLLGTAAKLALDGNVEAERGSEANQQSITS 187 Query: 181 SIDSIKGSV---IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 + + + + +++ + A I + P + I + G Sbjct: 188 QLTVSRADLPQANLSARLAYAPQQNRLDVDAILQEPKGGILANLLQLPDDPALAITVKGG 247 Query: 238 LFWNEKQPIYSGVFS 252 N+ + + Sbjct: 248 GPINDWKGSLAATLD 262 >gi|300113828|ref|YP_003760403.1| hypothetical protein Nwat_1148 [Nitrosococcus watsonii C-113] gi|299539765|gb|ADJ28082.1| protein of unknown function DUF748 [Nitrosococcus watsonii C-113] Length = 997 Score = 43.7 bits (101), Expect = 0.046, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 98/304 (32%), Gaps = 34/304 (11%) Query: 28 DWTDFREDFE-RQATLIVGKKIAV-----KGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81 W FR+ + +G + +G +++ + + + + K+ Sbjct: 243 PWKYFRDQVAFEIISGRIGGRANYTLERQEGALQLSLD-GVTFALTQLGLKPKKGDREIL 301 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW--------------FQR 127 I L I V +Y+ HL +++ +GV NW Sbjct: 302 TIPKFGFSGGQLRWPEKIIGVKFVYMGGTHLRAWMNKQGVLNWQKLFKNKTAEKKMTDST 361 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187 ++ ++KI V+ + D+ ++ L+ +L + + I L D Sbjct: 362 ANSPSSSWRAAIKKIKVENVSASLQDRTTEPSAALNVSDLGLQLINVTTIPGLKSDFNLQ 421 Query: 188 -SVIAEGTGNFDNKRSAFKITANFPAKNKAIS-------LKIQLFPLAYPIIIDLFGNLF 239 + +G A +A+ + +S L L +++ GN+ Sbjct: 422 FHLNKQGQFLARGHVMALPPSADLEIHLEPLSLLPFQPYLNRFLKLKLISGNLEVKGNIA 481 Query: 240 W----NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 + N + G ++ ++ L+ + F+ ++ SR + +I Sbjct: 482 YAQSNNAPNLQFKGKLALQKFATEDTLLDKRLLAWD-NLKFEQVLVDLFPSRIHIANIAL 540 Query: 296 NSST 299 ++ Sbjct: 541 DAPY 544 >gi|320101907|ref|YP_004177498.1| hypothetical protein Isop_0354 [Isosphaera pallida ATCC 43644] gi|319749189|gb|ADV60949.1| hypothetical protein Isop_0354 [Isosphaera pallida ATCC 43644] Length = 1420 Score = 43.7 bits (101), Expect = 0.046, Method: Composition-based stats. Identities = 37/328 (11%), Positives = 85/328 (25%), Gaps = 38/328 (11%) Query: 29 WTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID------QKEDGSFESK 82 E Q ++ + G I P V ++ ++ +DG Sbjct: 59 PDWIARRIEAQIDA----RVRLDG---WWIGPN-GVGLTNLILEPLTPPVDAQDGDRIVA 110 Query: 83 IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV---SNWFQRKSTMDMIHNVIL 139 ++ ++++ + LL+G + + + +G R+S Sbjct: 111 VDSIALQGRWGDLLAGRLSSTVLTLSGVKTTLRFDEEGHLLSPLPAFRESLDPQTDFTPP 170 Query: 140 EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN 199 I ++ + +I + + L R +++ L + + G+ +G N D Sbjct: 171 ALIRLERADLTLIQGSRSEHFQPVALEATPGPRGWSLVGGLENERL-GTWTLDGFINEDF 229 Query: 200 KRSAFKIT---------------ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 A + L L + G+ E Q Sbjct: 230 STIRLTARGRSLPLHRIYPTLPLAPPEIWDDFQPLSSLQSMLLEIVWDGSDGDAAGGENQ 289 Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 S S + G I+ + + L ++ Sbjct: 290 GELSYRIEADLTESSWSFPRAAMTGRARDGGLLITPTTIELRSVTLDTLG--GQLKVGGT 347 Query: 305 TKVSQDEENLLNFSENGAESMHDLNETD 332 +S++ + + DL Sbjct: 348 LDLSRNPSPG---TVRLSAINLDLQRVP 372 >gi|68171470|ref|ZP_00544856.1| hypothetical protein EchaDRAFT_0403 [Ehrlichia chaffeensis str. Sapulpa] gi|88658243|ref|YP_507001.1| hypothetical protein ECH_0176 [Ehrlichia chaffeensis str. Arkansas] gi|67999111|gb|EAM85776.1| hypothetical protein EchaDRAFT_0403 [Ehrlichia chaffeensis str. Sapulpa] gi|88599700|gb|ABD45169.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Arkansas] Length = 880 Score = 43.7 bits (101), Expect = 0.052, Method: Composition-based stats. Identities = 58/376 (15%), Positives = 116/376 (30%), Gaps = 24/376 (6%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKKIAVKGGIKIH-ILPF 61 R+LI G V L+ P FI+W + +Q I G ++VKG K+ L Sbjct: 2 RLLIYSGGTILVFLLFLIISPFFINWNSYYASHVLKQIEDISG-DVSVKGVGKVTGRLIL 60 Query: 62 PSVFFKDIRIDQKEDG----SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117 P + ++ I+ + I L ++ L LL +V + ID ++ Sbjct: 61 PKIVINNLYIEGHGNELLNHKSTILISRLELKISLLSLLLFSPKVNAITIDGLNIPLGNL 120 Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII-DQESDQVYFLSDLNLQISARFLNI 176 + N ++ +V + D S +S + I Sbjct: 121 LD--------LFSSFQSKNFNIKTFNVFNSVVNTSYDGTSFNSKPISIKSGTIKTVSDMK 172 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 + + K + + + +I AN +++ ++L A+ +I G Sbjct: 173 VINGLLSIGKNDYNVVADISLNEEH---RINANIYSQSTKVTLSGVAAGNAFDGVILTNG 229 Query: 237 N-LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 + + S+ + LS L F+++D + + Sbjct: 230 SDFSQFINDISETNKTSIFSFINSHEEFSLSTNIKLLDKTFELNDFKLSTDSMEG-IGKV 288 Query: 296 NSSTDEDNKTKVSQ---DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 S + D + L D D+ +N N ++K + Sbjct: 289 ICSNYASCSANIDFSRIDVDRLYGVKHESDVYRKDSRTLDYLNTLISENLNYNIKASAKE 348 Query: 353 YSVNKKEEKDNSHDKE 368 + + + D E Sbjct: 349 IKYHDQVSSNLIMDLE 364 >gi|292489597|ref|YP_003532487.1| hypothetical protein EAMY_3134 [Erwinia amylovora CFBP1430] gi|292898183|ref|YP_003537552.1| exported protein [Erwinia amylovora ATCC 49946] gi|291198031|emb|CBJ45134.1| putative exported protein [Erwinia amylovora ATCC 49946] gi|291555034|emb|CBA23097.1| Uncharacterized protein ytfN [Erwinia amylovora CFBP1430] Length = 1257 Score = 43.7 bits (101), Expect = 0.053, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 88/324 (27%), Gaps = 22/324 (6%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL D +F + I+G+K+ + G I I + + + Sbjct: 214 ALFAKPLLPDLPEFVLPLDVNVQQILGEKLRISGDSNIAINRLLLRAKTERNRLQLQALD 273 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 +D + LS L+ + V + ++ + + + S Sbjct: 274 VDSPQGQLNAQGEATLSGSWPLNFTLNSALNVEPLKGEKIKMTLGGGLRDTTKLALNLSG 333 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 ++ V G + + Q + L +A+F S + + Sbjct: 334 PLRAQLDADSQLAVAGLPLNMRLQSPQLRWPLDG-----AAQFQASNVNFSFNGQATDYV 388 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNLFWNEKQPIYSG 249 + T K + L A DL L K + Sbjct: 389 MSLKAALQGEGLP-PATLTLDGKGNVAQFSLDKLRLAALQGNTDLTA-LIDWSKAISWRS 446 Query: 250 VFSVAGDFSKLLNLELSA---KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT- 305 +++G + + A K G+ +R+ KL+ + N++ D Sbjct: 447 ELTLSGINTAKQYPDWPAKLEGKITTRGSLYGGSWQMRVPELKLKGNVRNNAVSADGSLS 506 Query: 306 --KVSQDEENLLNFSENGAESMHD 327 +Q + + Sbjct: 507 GNSYNQWDIPGIKLVLGRNNLNLK 530 >gi|300715063|ref|YP_003739866.1| conserved uncharacterized protein YtfN [Erwinia billingiae Eb661] gi|299060899|emb|CAX58006.1| conserved uncharacterized protein YtfN [Erwinia billingiae Eb661] Length = 1257 Score = 43.7 bits (101), Expect = 0.054, Method: Composition-based stats. Identities = 39/328 (11%), Positives = 85/328 (25%), Gaps = 30/328 (9%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL D DF + I+G+++ + G I + + + + Sbjct: 214 AMFAKPLLPDLPDFNMPLDVDVQEILGEQLRITGDTDITVNRLLVKAKTQDKLLHLETLN 273 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 +D + LS L+ + V + ++ + + N S Sbjct: 274 VDSPQGQLNAQGQATLSDNWPVNFTLNSTVNVDPIKGEKIKMTLDGGLREQLNMALNLSG 333 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA----RFLNIISPLSIDSIK 186 + G ++ D + L+ ++ S Sbjct: 334 PVQVQM---------DGNTRLADVGLPLSVNVKSPQLRWPLTGEIQYEVDNFNFSFKGKA 384 Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNLFWNEKQP 245 + T K + L A IDL + W++ Sbjct: 385 TDYAMSLKAALKGQGIP-PATVALDGKGNIEQFSLDKLRLAALEGNIDLTALVDWSK-AI 442 Query: 246 IYSGVFSVAGDFSKLLNLELSAKK---SRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302 + +++G + + AK G+ +R+ KL+ + ++ D Sbjct: 443 SWRSDLTLSGINTAKQYPDWPAKLEGHISTRGSLYGGSWQMRVPELKLRGNVKQNAVTAD 502 Query: 303 NKT---KVSQDEENLLNFSENGAESMHD 327 +Q + L Sbjct: 503 GSLYGNSYNQWDIPGLKLVLGRNNINLK 530 >gi|238787566|ref|ZP_04631364.1| hypothetical protein yfred0001_20850 [Yersinia frederiksenii ATCC 33641] gi|238724353|gb|EEQ15995.1| hypothetical protein yfred0001_20850 [Yersinia frederiksenii ATCC 33641] Length = 1253 Score = 43.3 bits (100), Expect = 0.057, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 105/344 (30%), Gaps = 47/344 (13%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71 F PL D DFR + I G+++ + G + I + + I Sbjct: 211 LFAKPLLPDLPDFRLPLDLNIKEISGQQLRLTGDTDVLISSVLLRATTQDNRITLDTLDI 270 Query: 72 DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVF-------DMYIDQP---HLNFYLSSKGV 121 + G L+ + +++ + + + + L L+ G Sbjct: 271 KSPQGGLSAHGEAQLADKWPLSMVVNSALNIEPLKGEKVKLTVGGALREQLKVDLNLSGP 330 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + T + L + ++ +++ + + L +L + + + + + Sbjct: 331 VSAQLAAETALAQAGLPLA-LTLQSKQLRWP-LSGEPQFQLDNLRMHFNGQATDYALSIR 388 Query: 182 IDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDLF 235 D +G GN + ++ N ++ + +++ ++ L Sbjct: 389 SDFKGTDLPPAVFTLDGKGNVEQFNLT-RLRLAALQGNTDLTGVVDWSKAISWNSVLTLS 447 Query: 236 G---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281 G W E G G L L+ + K++R++ ++ G Sbjct: 448 GINTAKQWPEWPAKLDGKIVTRGSIHGGSWQLQVPELTLDGNVKQNRVTARGSLTGNAAG 507 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 I KL ++ D + + L+ + + + Sbjct: 508 QWHIPGIKLALGR--NNLDVKG----NLGDNWQLDANVDAPQLD 545 >gi|296116292|ref|ZP_06834908.1| hypothetical protein GXY_10857 [Gluconacetobacter hansenii ATCC 23769] gi|295977111|gb|EFG83873.1| hypothetical protein GXY_10857 [Gluconacetobacter hansenii ATCC 23769] Length = 1395 Score = 43.3 bits (100), Expect = 0.059, Method: Composition-based stats. Identities = 36/277 (12%), Positives = 87/277 (31%), Gaps = 23/277 (8%) Query: 12 LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71 F ++LVGA + R + ER+ + G + + G + + + Sbjct: 34 AFMLILVGA-------NTGMGRHEIERRLPGLTGGSVRMTG-LSGRFPDSLRIA----HL 81 Query: 72 DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM 131 + + I+ L++ LL V D+ I + + + + Sbjct: 82 ELNDYRGTWLAIDDLALDWSPTRLLLRRAVVDDISIARLSIPRLSEEDPAHQSPPSRDSS 141 Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA 191 D +H + ++ I ID + + +L AR +I L+ S+ A Sbjct: 142 DNVHM----GVDIRHAHIARIDVGAPLARLPATFSLDGHARLADIAPVLNGISVATLPAA 197 Query: 192 EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251 + ++ ++L + + G L + Sbjct: 198 DINLQVQRLDQPGTVSVRTQLGRGTLALDVHAHEEKNGFL----GTLSGLPMLAPLNLDM 253 Query: 252 SVAGD---FSKLLNLELSAKKSRLSGNFKISDGNVRI 285 V+G + + ++ A ++ + G + +++ Sbjct: 254 HVSGPRDQSTLAVAIQAGAAQAHIDGRVGLVHHAMQL 290 >gi|156766050|ref|NP_612429.2| protein AHNAK2 [Homo sapiens] gi|172045740|sp|Q8IVF2|AHNK2_HUMAN RecName: Full=Protein AHNAK2 Length = 5795 Score = 43.3 bits (100), Expect = 0.061, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 104/344 (30%), Gaps = 38/344 (11%) Query: 49 AVKGGI---KIHILPF---PSVFFKDIRIDQKEDGSFE---SKIEGLSMRAEFLPLLSGE 99 +++G + + I P + + + E E K ++ + + Sbjct: 1366 SMQGDLKTTDLSIQPPSTDLELQAGQLDVKLPEGPVPEGAGLKGHLPKLQMPSFKVPKVD 1425 Query: 100 IRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159 ++ ++ I P L+ V+ S + +V + GGR++ +D+ Sbjct: 1426 LKGPEIDIKGPKLDLKDPKVEVTAPDVEVSLPSVEVDVEAPGAKLDGGRLEEDMSLADKD 1485 Query: 160 YFLSDLNLQISAR--------FLNIISPLSIDSIKGSVIAEGTG-NFDNKRSAFKITANF 210 D ++ S+D V A+ + + A ++ Sbjct: 1486 LTTKDSKFKMPKFKMPSFGVSAPGKSIEASVDVSAPKVEADVSLPSMQGDLKATDLSIQP 1545 Query: 211 PAKNKAIS-LKIQLFPLAYPII--IDLFGNL------FWNEKQPIYSG-VFSVAGDFSKL 260 P+ + + ++ + P+ L G+L + + G V G L Sbjct: 1546 PSADLEVQAGQVDVKLPEGPVSEGAGLKGHLPKVQMPSFKMPKVDLKGPQIDVKGPKLDL 1605 Query: 261 LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE-------- 312 ++ + + + +V+ R KL +K ++D + Sbjct: 1606 KGPKVEVTAPDVKMSLSSMEVDVQAPRAKLDGAQLEGDLSLADKAVTAKDSKFKMPKFKM 1665 Query: 313 NLLNFSENGAESM--HDLNETDFFEEEEKKNKNDDLKKDDIQYS 354 S G D++E + + DLK D+ Sbjct: 1666 PSFGVSAPGKSIEASVDVSEPKVEADVSLPSMQGDLKTTDLSIQ 1709 >gi|186473138|ref|YP_001860480.1| hypothetical protein Bphy_4318 [Burkholderia phymatum STM815] gi|184195470|gb|ACC73434.1| protein of unknown function DUF748 [Burkholderia phymatum STM815] Length = 1268 Score = 43.3 bits (100), Expect = 0.063, Method: Composition-based stats. Identities = 42/332 (12%), Positives = 77/332 (23%), Gaps = 26/332 (7%) Query: 49 AVKGGIKIHIL-----PFPSVF----FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE 99 + + + + P + DI + E + L + A+ L L Sbjct: 266 KLSSDLNVTFVMTEDAPTLRITGTTDLADIDVLD-EHKAPFFAARSLHVAAQTLEPLKSV 324 Query: 100 IRVFDMYIDQPHLNFYLSSKG-----VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQ 154 R D+ +D P ++ G + + + G Sbjct: 325 YRFDDIRLDSPTVHLARDKSGVLSVQRTFAPAPAAGQQKAASAPAVASGASGASGASGAA 384 Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214 +D + L+LQI L S +D + + N Sbjct: 385 AADAAKAVPPLDLQIKHFAL---SDGVVDMQDEAASRPVSAGLSNLAVTLDDFTTLGKTP 441 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274 +L ++ + + GNL K A L+ L G Sbjct: 442 ARYTLNTKVQNHRQST-LAVTGNLTLAAKTADAKIDLKSAELPVLQPYLDTVTSAKVLDG 500 Query: 275 NFKIS---DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL--- 328 + + N LQ + + + DL Sbjct: 501 TLSVQSALNANWSKEPVDLQIGESQIDLQALKLAAAGAKQAAIAIADGKASIKHVDLAAR 560 Query: 329 -NETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359 E D + LK I + Sbjct: 561 KAEIDGVDLTGLSVDAQRLKDGTIDLAALAAP 592 >gi|171696292|ref|XP_001913070.1| hypothetical protein [Podospora anserina S mat+] gi|170948388|emb|CAP60552.1| unnamed protein product [Podospora anserina S mat+] Length = 927 Score = 43.3 bits (100), Expect = 0.063, Method: Composition-based stats. Identities = 27/252 (10%), Positives = 68/252 (26%), Gaps = 26/252 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFRE--DFE----RQATLIVGKKIAVKGGIK 55 +RR LI + L V + ++ ++ E GK++ + + Sbjct: 106 MRRTLIIVAGLLISAWV--VGLFFYVSHKSYKPASQIEHDPQATVVQGTGKQVTLDQVMG 163 Query: 56 IHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + I + DG + L + ++ Sbjct: 164 SYW----RAESHSISWIESPDGEDGLLL------------LKDGPGKDFLVVEDVRTQNS 207 Query: 116 LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 + ++ + + GR+ ++ +V ++L F Sbjct: 208 AGVNAAVDVASSRTLIKE-RHFDFGGQTHTPGRV-WPSKDLKKVLIATNLEANWRHSFYA 265 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 +D + G N + + + T++ A + +L ++ + I Sbjct: 266 SYWVFDVDMQIAEPLIPGEPNVRVQLAQWSPTSDAIAYVRDNNLFLRSLKHDKVVQITKD 325 Query: 236 GNLFWNEKQPIY 247 G P + Sbjct: 326 GGAEVFNGVPDW 337 >gi|262277707|ref|ZP_06055500.1| putative membrane-bound pili assembly protein Fimc [alpha proteobacterium HIMB114] gi|262224810|gb|EEY75269.1| putative membrane-bound pili assembly protein Fimc [alpha proteobacterium HIMB114] Length = 275 Score = 43.0 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 40/102 (39%), Gaps = 3/102 (2%) Query: 9 LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68 L ++++ G + F + E +AT +++ + +KI L V K+ Sbjct: 4 FIILITLIVGGVYFFAEFKADNIAKNIIESEATKAAEREVKID-NLKIDFL-KEQVTLKN 61 Query: 69 IRIDQKEDGS-FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 I I + KI+ + + ++S + + + ++ Sbjct: 62 ITIKNNDGFPGDLLKIKDVKIITNLKSVISDTVEIKLVDLNG 103 >gi|91762803|ref|ZP_01264768.1| possible membrane-bound pili assembly protein Fimc [Candidatus Pelagibacter ubique HTCC1002] gi|91718605|gb|EAS85255.1| possible membrane-bound pili assembly protein Fimc [Candidatus Pelagibacter ubique HTCC1002] Length = 237 Score = 43.0 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 20/188 (10%), Positives = 72/188 (38%), Gaps = 18/188 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++ L + + + + FI + E + + +++++K + I L Sbjct: 1 MKKFLSIITIF----TLSFYILVEFIGDRLIKNILEDNISSSLNREVSIK-KLSIDYLSG 55 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL----- 116 +I+I K+ ++++ + + + + S +I + D+ ++ +LN+Y Sbjct: 56 -EARANNIKILNKKFDGNLAEVDFVKVNLDTFSIFSNDILINDVQLNNINLNYYFKFSDR 114 Query: 117 -----SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII--DQESDQVYFLSDLNLQI 169 + + + ++ + K + ++ D + ++ + ++D+N + Sbjct: 115 ITSDNLRNLQQDLEFKNTDSQSSKYFNIKNLDAKNINLAVLSSDFDFEKTFTINDMNFKD 174 Query: 170 SARFLNII 177 + Sbjct: 175 IGNTKDSK 182 >gi|300771540|ref|ZP_07081415.1| penicillin-binding protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761529|gb|EFK58350.1| penicillin-binding protein [Sphingobacterium spiritivorum ATCC 33861] Length = 694 Score = 43.0 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 25/262 (9%), Positives = 83/262 (31%), Gaps = 13/262 (4%) Query: 38 RQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS 97 + G + ++ +V FK++ + + + I+ ++ PLL Sbjct: 52 EKMDKKYGVDLKIQ---YYGFKGLATVVFKNVYVT-PKGKDQLAHIDDFAVSVRIWPLLF 107 Query: 98 GEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----RKSTMDMIHNVILEKIHVKGGRIKIID 153 G++++ + +++ + +SN+ + + G +K + Sbjct: 108 GDVKIGQIEMNKANFTLIK-KDSISNYDFLFKKKNKDSTDTPKAEKNLASLADGILKQVF 166 Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213 + + + D + + I G + ++ + + + Sbjct: 167 FKIPRNMDVQDFEVSFRDDSTYQRLRIPRAEISGG-DIDAALFLNDNDAQWNVAGYVNPD 225 Query: 214 NKAISLKIQLFPLAYPII-IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 + ++LK+ + + + + + V ++L L L Sbjct: 226 RQELNLKLSSEQKDTEFPFLKSKFGVRLSFDEIEFDLN-KVDRKGKEMLTLRGDWHFKNL 284 Query: 273 S-GNFKISDGNVRISRYKLQSI 293 ++++SD ++ + L+ Sbjct: 285 KVHHWRLSDQDINLPEATLEGG 306 >gi|217977781|ref|YP_002361928.1| hypothetical protein Msil_1618 [Methylocella silvestris BL2] gi|217503157|gb|ACK50566.1| conserved hypothetical protein [Methylocella silvestris BL2] Length = 1197 Score = 43.0 bits (99), Expect = 0.076, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 59/199 (29%), Gaps = 5/199 (2%) Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189 T ++++ + GRI + D+ S+Q +NL LS+D G Sbjct: 243 TSPDSQIAAVDRVGITRGRIVVDDRTSNQKMTFDGVNLAFDKTDAGTRFTLSVDGPNGRW 302 Query: 190 IAEGTGNFDN---KRSAFKI-TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245 A G + +R F + + A ++ P+ + L + Sbjct: 303 SASGLASGQPGADRRLTFSLENLSIDEILLATGVRSIGADFDMPLSAHVNVGLRADGVLS 362 Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSR-LSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 F + + + + + G G RI ++ + S Sbjct: 363 EAVATFGLGSGYLRFDDPNDEPMLVDEIKGGVHWDGGQRRIVVDPVRLVAGQSHGAVSGF 422 Query: 305 TKVSQDEENLLNFSENGAE 323 + Q E + F E Sbjct: 423 IALPQREGDAWTFELGAPE 441 >gi|313497640|gb|ADR59006.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 357 Score = 43.0 bits (99), Expect = 0.079, Method: Composition-based stats. Identities = 38/360 (10%), Positives = 99/360 (27%), Gaps = 20/360 (5%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R L+GL L +++ +P + R+ + + + V + + Sbjct: 6 RWPLVGLASLIVLLVALHLALPYLV-----RDYLNDKLADMGDYRGQVA-DVDLAWWRG- 58 Query: 63 SVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + ++I + + + + L + V ++ P LNF Sbjct: 59 AYQINGLKIVKTTGKVPVPFLDAPLIDLSVSWHSLWYDKAVVAEVTFVHPELNFVDGGSK 118 Query: 121 VSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 ++ + + + + L ++ + G + + S L L S R L Sbjct: 119 QASQTGQGTDWRQQLEKLLPITLNEVRIDNGVLTFRNFNSKPPVDLKATRLNASIRNL-- 176 Query: 177 ISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 + + + EGT + + T + + +++ + + D Sbjct: 177 -TNVRDQQGRRDASFEGTALIAGDAKVESRATFDPFSDFDDFEFRLRATGIELRKLNDFA 235 Query: 236 ---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292 G +N L + + + R ++ Sbjct: 236 SAYGKFDFNAGHGDVVIEAQAENGRLNGYIKPLLRDVDVFDWQQDVEEKDKGFFRSVWEA 295 Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352 ++ + T N+ K L+ S + + N ++ + Sbjct: 296 LVGATETVLKNQPKNQFATRVELSGSVRKQDVSAFEAFLQILRNGFVQAFNARYEQPAPK 355 >gi|171913098|ref|ZP_02928568.1| hypothetical protein VspiD_18000 [Verrucomicrobium spinosum DSM 4136] Length = 1387 Score = 43.0 bits (99), Expect = 0.083, Method: Composition-based stats. Identities = 49/386 (12%), Positives = 111/386 (28%), Gaps = 42/386 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLF---IDWTDFREDFERQATLIVGKKI--AVKGGIKI 56 L+RVL+G+ L +V++ F PL +DW G ++ + G + Sbjct: 24 LKRVLLGITALVLLVVI--FHRPLLRWGVDWGAH------HFAGKAGYQLDWQLDGPV-- 73 Query: 57 HILPFPSVFFKDIRIDQKEDGS-FESKIEGLSMRAEFLPLLS--GEIRVFDMYIDQPHLN 113 D+R+ + +++ + LLS G V I + Sbjct: 74 ----ITGFKLGDVRVVGPQGAVLQSIELKNAGAEYNLVKLLSRGGGRFVDRFEISDAVVV 129 Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 L ++ + + +V L+ + ++ ++ I Q+ L +L L + Sbjct: 130 LDLRNQKPRTEPLPSTQRKSLPDVWLDDLALRNVTVRAITQDG--EILLKNLTLVLKQGQ 187 Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 + + + S+ E ++ N +++ I L+ I Sbjct: 188 TGELRIEELVVPQRSLHIE------------QVRGNTALQDRWIRLQDLQVMPDLTIQKL 235 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK---- 289 E S + + LS + ++ + + Sbjct: 236 AVNLSQLREGDLPLELELSSGTSRLQTKGSLKGVGRENLSLDLDLTVDQLEDGELRRWVA 295 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349 L + E + L + + D F+ ++ N +K Sbjct: 296 LPVGMTWQVNRLAGHVSGLPGEPHSLTADLALHATSF-ITGQDGFKVDD-LNTRLTMKSG 353 Query: 350 DIQYSVNKKEEKDNSHDKENQENFSG 375 ++ + N Q + Sbjct: 354 RLEIHDAVIKAGRNLLKLSGQADLPP 379 >gi|85711212|ref|ZP_01042272.1| Uncharacterized conserved secreted protein [Idiomarina baltica OS145] gi|85695125|gb|EAQ33063.1| Uncharacterized conserved secreted protein [Idiomarina baltica OS145] Length = 583 Score = 43.0 bits (99), Expect = 0.089, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 39/114 (34%), Gaps = 4/114 (3%) Query: 8 GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67 GLG F V+ LF+D + FE+ + G ++ V + P + Sbjct: 10 GLGAFFVVLGTLVLLSWLFLDT-ILKFTFEQTLGRLNGAEVNVA-EVSHQWSP-VRLTLT 66 Query: 68 DIRIDQKEDGS-FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 ++I + E +S L+ G + + + + L S G Sbjct: 67 GVQITDPNQPELNRVQAERISGDVSLSELILGRVLMEQLDVTGVRLAQKRESPG 120 >gi|321470168|gb|EFX81145.1| hypothetical protein DAPPUDRAFT_242649 [Daphnia pulex] Length = 263 Score = 42.6 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 70/222 (31%), Gaps = 19/222 (8%) Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197 + ++ G + D E+ D + +I + G + A+ +G+ Sbjct: 53 DFQYEDIEAGDFQYEDIEAGDFPSDIDGDFSGDFEAGDINGDMF-----GDIDADLSGDI 107 Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII-----DLFGNLFWNEKQPIYSGVFS 252 D + +S + + + D G+L N + + G F Sbjct: 108 DGDLFGDIDADLSGDIDGDLSGDFEANDIDGDLSGNFEAGDFDGDLSGNFEAGDFDGDFQ 167 Query: 253 VAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRIS-RYKLQSILPNSSTDEDNKTKVSQ 309 + ++ L + + LSG+ + + + + + S D D + Sbjct: 168 YKDFEAGDIDGELSGNFEAGDLSGDIDGDFKSSDFNVDLRFGDLNGDLSGDFDGDFQ--- 224 Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 N + D + DF + + + + +L+ ++ Sbjct: 225 --SGDFNVDLRFGDLNGDFS-GDFDSDFQSGDFDAELQSGNL 263 >gi|303237890|ref|ZP_07324445.1| conserved hypothetical protein [Prevotella disiens FB035-09AN] gi|302481917|gb|EFL44957.1| conserved hypothetical protein [Prevotella disiens FB035-09AN] Length = 1722 Score = 42.6 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 34/351 (9%), Positives = 104/351 (29%), Gaps = 36/351 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW----TDFREDFERQATLIVGKKIAVKGGIKIH 57 +R+ + L + ++ + + + + A+ G +I+++ + Sbjct: 25 MRKSMKWLIAIVLAPILLFIILLVLLYLPPVQNWAVKQVASYASEKTGLEISLE---HVS 81 Query: 58 ILPFPSVFFKDIRIDQKEDGSF-----ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112 + + + ++ + D + ++ L + + +PL S ++ + + Sbjct: 82 LSFPLDLKLEGFKMLRPNDSIPQRRDTVADVKELLVDVQLIPLFSNQVEIDKLTFKNLKA 141 Query: 113 N-------FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGG--RIKIID--------QE 155 N + IL + G I + D ++ Sbjct: 142 NTMDYIGDLQIRGDLQRLQLTAHGIDLNNSAAILNSAEMADGFLDIALNDTMPKDTTKKK 201 Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215 + + LNL +A L++ + K A N D + ++++ + ++ Sbjct: 202 TLWKINVEKLNLYNTALKLHMPGDTMVVGAKFGRAALTKTNIDLLKKSYRVQ-SLNWQSG 260 Query: 216 AISLKIQLFPLAYPIIIDLFGN---LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 ++ + A + L Y A + + + L Sbjct: 261 MLTYDMIYQKRAKQGFDAAHISMTDLNLGVDSLAYDSTGIAANIRTANFKEKSGLIVNDL 320 Query: 273 SGNFKISDGNVRISR--YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321 NF++ ++ ++ + + D ++ + +G Sbjct: 321 RTNFRLDANRFYLTPLYLRMPNTELRGNFIMDLNAFADKNPG-KFKINLDG 370 >gi|312173774|emb|CBX82028.1| Uncharacterized protein ytfN [Erwinia amylovora ATCC BAA-2158] Length = 1240 Score = 42.6 bits (98), Expect = 0.097, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 87/324 (26%), Gaps = 22/324 (6%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL D +F + I+G+K+ + G I I + + + Sbjct: 197 ALFAKPLLPDLPEFVLPLDVNVQQILGEKLRISGDSNIAINRLLLRAKTERNRLQLQTLD 256 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 +D + LS L + V + ++ + + + S Sbjct: 257 VDSPQGQLNAQGEATLSGSWPLNFTLISALNVEPLKGEKIKMTLGGGMRDTTKLALNLSG 316 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 ++ V G + + Q + L +A+F S + + Sbjct: 317 PLRAQLDADSQLAVAGLPLNMRLQSPQLRWPLDG-----AAQFQASNVNFSFNGQATDYV 371 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNLFWNEKQPIYSG 249 + T K + L A DL L K + Sbjct: 372 MSLKAALQGEGLP-PATLTLDGKGNVAQFSLDKLRLAALQGNTDLTA-LIDWSKAISWRS 429 Query: 250 VFSVAGDFSKLLNLELSA---KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT- 305 +++G + + A K G+ +R+ KL+ + N++ D Sbjct: 430 ELTLSGINTAKQYPDWPAKLEGKITTRGSLYGGSWQMRVPELKLKGNVRNNAVSADGSLS 489 Query: 306 --KVSQDEENLLNFSENGAESMHD 327 +Q + + Sbjct: 490 GNSYNQWDIPGIKLVLGRNNLNLK 513 >gi|238783543|ref|ZP_04627565.1| hypothetical protein yberc0001_8870 [Yersinia bercovieri ATCC 43970] gi|238715598|gb|EEQ07588.1| hypothetical protein yberc0001_8870 [Yersinia bercovieri ATCC 43970] Length = 1261 Score = 42.6 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 42/345 (12%), Positives = 109/345 (31%), Gaps = 47/345 (13%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL + DFR + Q I G+++ + G + I + + Sbjct: 218 ALFAKPLLPELPDFRLPLDLQIKSISGQQLRLTGDTDVLISSLLLQASTQDQRITLDTLE 277 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVF-------DMYIDQP---HLNFYLSSKG 120 I + G L+ + +++ + V + +D L L+ G Sbjct: 278 IKSPQGGLSAQGEATLADKWPLSMVVNSTLNVEPLKGEKVKLTLDGALREQLKVALNLSG 337 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + + L + ++ +++ + Y + +L ++++ + + + Sbjct: 338 PVSAQLDAEASLAQVGLPLA-LTLQSKQLRWP-LAGESEYQIDNLRMRLNGQATDYALSI 395 Query: 181 SIDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDL 234 + + +G GN + ++ N ++ + +++ ++ L Sbjct: 396 RAELKGSDLPPAVLTFDGKGNIEQFNLT-RLRLAALQGNTDLTGVVDWSKAVSWNSVLTL 454 Query: 235 FG---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD--- 280 G W E SG G L L+ + K++R++ ++ Sbjct: 455 SGINTAKQWPEWPAKLSGKIVTRGSIHGGSWQLQVPELTLDGNVKQNRVTARGSLTGNAA 514 Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 G I L + D +++ L+ + + + Sbjct: 515 GQWHIPGINLALGR--NKLDVRG----DLNDQWQLDANIDAPQLD 553 >gi|307295019|ref|ZP_07574861.1| protein of unknown function DUF490 [Sphingobium chlorophenolicum L-1] gi|306879493|gb|EFN10711.1| protein of unknown function DUF490 [Sphingobium chlorophenolicum L-1] Length = 1400 Score = 42.6 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 38/357 (10%), Positives = 93/357 (26%), Gaps = 55/357 (15%) Query: 26 FIDWTDFREDFERQATL---IVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82 F++ ++ RQ G I V G I+ I ++ ++ + + + Sbjct: 44 FLNTQPGKKFLIRQIAALKLESGMAIEV-GRIEGSIYSDMTIR--NLVLRDPKGI--FAV 98 Query: 83 IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKI 142 + + ++ I V ++ P + S N + ++ ++ ++ Sbjct: 99 SPEVHVVWSPFRYINNHISVR--LLESPLVVLARSP--RFNITKTDPNAPILPDLDIDVD 154 Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202 +K GR + Q + +G + + R+ Sbjct: 155 RLKIGRFLVAKPVIGQKREI---------------------------AIDGVTHIADGRA 187 Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262 A + + L+ L + + + G L + I +++G Sbjct: 188 ILSANAVVDSGD---RLQAHLDAVPAQNRLSMRGTLTAPKNGVIA----AMSGLTDGFTA 240 Query: 263 LELSAKKSRL-SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321 + +G + G ++ L D L F+ Sbjct: 241 TLDGRGTWQAWNGRLIATSGKGELANIAL--------AARDGNFTAKGPLRPGLVFAGTV 292 Query: 322 AESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378 + D F + N S + D + + + Sbjct: 293 DRLTTPALDVDLFAGLNARRVNLKGTLKSPALSATAQGLVDLGQSRFSALRIDAALL 349 >gi|32474762|ref|NP_867756.1| hypothetical protein RB7309 [Rhodopirellula baltica SH 1] gi|32445301|emb|CAD75303.1| hypothetical protein RB7309 [Rhodopirellula baltica SH 1] Length = 1315 Score = 42.6 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 43/339 (12%), Positives = 98/339 (28%), Gaps = 27/339 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFID-WTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 ++R + L ++G P I R R V + I Sbjct: 77 MQRKRTLVLVLLVFAILGIGAFPSLISHSPMGRSLLVRTL-DAYDLDANVD---SMQIGW 132 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEI---RVFDMYIDQPHLNFYLS 117 + + + + + GS ++ L L SG+ + ++ + L+ + Sbjct: 133 LTPLQIRGLHLVGRTSGSE-ITVDDLQTSISLSNLWSGDPQAGQFGEVLVRGVQLSCTVD 191 Query: 118 SKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD--LNLQIS 170 G ++ Q T + + + ++ I+ D + Q + LS N + Sbjct: 192 -NGTTSIEQDLAKLLAPTGEPSSFIPRGTVKLQDLEIRATDAATSQTWTLSQSHANAVLD 250 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 A L++ + G G G+ N A + ++++I L + Sbjct: 251 ASLLDVTFDGVLSQPGG-----GDGSLAGHVKLAMDPGNVSADGERLAVEIDADSLPLSV 305 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 + + +E +G K + + + L V Sbjct: 306 LTLVQRRFPSSELPTAITGDV-----SGKTQLILTGSGEPNLVLRQLYVRNLVAADAQTG 360 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329 + + N D ++ N + + +N Sbjct: 361 RKLWDNELATFDGDLQIRGGRVNARQIAAKTDFASVQMN 399 >gi|304413351|ref|ZP_07394824.1| hypothetical protein REG_0395 [Candidatus Regiella insecticola LSR1] gi|304284194|gb|EFL92587.1| hypothetical protein REG_0395 [Candidatus Regiella insecticola LSR1] Length = 1253 Score = 42.6 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 97/344 (28%), Gaps = 46/344 (13%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71 F PL DF + Q I+ ++I +KG + I F V D++I Sbjct: 210 FFATPLLPKLPDFSLPLDIQIKEILAQQIRIKGDQDVLITHFLLKGSTQGQQVQLDDLQI 269 Query: 72 DQKED----GSFESKIEGLSMRAEFLPLLS-GEIRVFDMYID-----QPHLNFYLSSKGV 121 + + + L+ ++ + + + L L+ G Sbjct: 270 KSPQGELSAKGNLTLAGKWPLDIVANSTLNIAPLKEEKIKLKLAGDLRGQLALALNLSGS 329 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + T + L ++ +++ D+ Y L++ N++ + + L Sbjct: 330 VSAQLTAKTQLSEIGLPL-SATLQSQQLRWP-LTGDKQYQLNNFNMRFDGKMTDYALSLR 387 Query: 182 IDSIK-----GSVIAEGTGNFDN---KRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 D EG G+ + + + + Sbjct: 388 SDFQGLDLPSAQFTLEGKGDLAQFYLTALNLAALQGNAHLTGRVDWRNAINWHQILTVSG 447 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI------------SDG 281 + W G + G S+ + ++ + L+GN K S G Sbjct: 448 INTEKQWPAWPAKLDGKITTQGSVSRDGHWQMQIPELTLNGNIKQKQLTARGAISGNSAG 507 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 + L +S + D+ L+ S + E Sbjct: 508 QWHVPAINLALGR--NSLNIKG----DLDKNWALDASLDAPELN 545 >gi|123440787|ref|YP_001004778.1| hypothetical protein YE0406 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087748|emb|CAL10533.1| putative exported protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 1259 Score = 42.6 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 108/344 (31%), Gaps = 47/344 (13%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71 F PL D DFR + Q I G+++ + G + I + + I Sbjct: 217 LFAKPLLPDLPDFRLPLDLQIKEISGQQLRLTGDTDVLITSLLLQASTQDNRITLDTLDI 276 Query: 72 DQKEDG----SFESKIEGLSMRAEFLPLLS-GEIRVFDMYID-----QPHLNFYLSSKGV 121 + G + + + L+ ++ + + + LN L+ G Sbjct: 277 KSPQGGLSARGEATLADTWPLSITVNSALNIAPLKGEKVKLTVGGGLREQLNVALNLSGP 336 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + T + + + ++ +++ + + L +L ++++ + + + Sbjct: 337 VSAQLEAETALAQAGLPMA-LTLQSKQLRWP-LSGEPQFQLDNLRMRLNGQATDYALSIR 394 Query: 182 IDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDLF 235 D +G GN + ++ N ++ + +++ ++ L Sbjct: 395 SDFKGTDLPPAIFTLDGKGNVEQFNLT-RLRLAALQGNTDLTGVVDWSKAISWNSVLTLS 453 Query: 236 G---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281 G W E G G L L+ + K++R++ ++ G Sbjct: 454 GINTAKQWPEWPAKLDGKIVTRGSIHGGSWQLQVPELTLDGNVKQNRVTARGSLTGNAAG 513 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 I L + D ++ LL+ + + + Sbjct: 514 QWHIPGINLALGR--NKLDVKG----DLNDNWLLDANVDAPQLD 551 >gi|157964429|ref|YP_001499253.1| hypothetical protein RMA_0490 [Rickettsia massiliae MTU5] gi|157844205|gb|ABV84706.1| hypothetical protein RMA_0490 [Rickettsia massiliae MTU5] Length = 892 Score = 42.2 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 53/382 (13%), Positives = 133/382 (34%), Gaps = 33/382 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M++++ G+ FS++L F F+++ T +G G IK++ P Sbjct: 17 MIKKIAAGVIICFSLLLFIMFGALSFVNYNS----VTNNFTSHLGIAKENIGKIKMNKFP 72 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + IR + +E + + L+ ++ + I S+ Sbjct: 73 LSYLVIETIR------EEGKLDLEQIKIHFSLWSLIKFNPKINKIDILDAKFY---SNSN 123 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 V N + + + L+ I++ + II+++ + ++ L+ + Sbjct: 124 VLNIYNHEELIKNFFKYKLQNINLNVTNLSIINKQDYSILNFNNCILKKENALSSNYIFK 183 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITAN------------FPAKNKAISLKIQ-LFPLA 227 + + G + D + I N + + +I+ L + Sbjct: 184 ATSNYIGKISGSINKRDDIVEFSLNIGNNDYGFKLSQIYKDSKLTSGSGEYQIKNLASVM 243 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDF--SKLLNLELSAKKSRLSGNFKISDGNVRI 285 Y I+ DL + + F+++ + +L ++ +++ +G I+ + Sbjct: 244 YNILPDLNHLFNKFNQHEAVNVKFNISNNEDAIELKDIVIASSFIIGNGFVNIAKNDNIT 303 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEE---NLLNFSENGAESMHDLNE--TDFFEEEEKK 340 + KL + + +V+ + F++ ++ +NE EE EK Sbjct: 304 TNVKLDFPKIDLRSLISPNAEVTFNTSSSNIRFIFADKLLKADVAINEIILSNNEELEKI 363 Query: 341 NKNDDLKKDDIQYSVNKKEEKD 362 + +L K ++ + K Sbjct: 364 VFSSNLSKGTLKINEFSGNIKS 385 >gi|332702391|ref|ZP_08422479.1| hypothetical protein Desaf_1245 [Desulfovibrio africanus str. Walvis Bay] gi|332552540|gb|EGJ49584.1| hypothetical protein Desaf_1245 [Desulfovibrio africanus str. Walvis Bay] Length = 307 Score = 42.2 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 29/275 (10%), Positives = 71/275 (25%), Gaps = 42/275 (15%) Query: 2 LRR-----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56 ++R +L L +VL+ P W G +++ Sbjct: 12 MKRRIPTILLYAGFGLAVLVLLAMIKFP----WPVLAGRLTSTVNA--------SGVVRL 59 Query: 57 HI-------LPFPSVFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEI-RVFDMYI 107 P P + + + + + + + + +L L G+ Sbjct: 60 SYLVATPSCFP-PGLVLEGVALTSAQDPDTPLFTASRVRLTPAWLSFLVGKTGVKLRAEA 118 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG---------GRIKIIDQESDQ 158 L +++ G+++ + + + + GRI + S Sbjct: 119 YGGELRGRITADGITSPENFVVDLSLDDLDLSRHPQLAEQAGAQGLLSGRISLAGPLSGS 178 Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218 L + +L +++ S + + + N R + + Sbjct: 179 QALLGNADLAVTSGAARYKSDFLTRDVVRLGKVQADLTWLNGRLGVE-RLAMAEGDLQGE 237 Query: 219 LKIQLFPLAY-----PIIIDLFGNLFWNEKQPIYS 248 LK P + + G+L Sbjct: 238 LKGSFQPGQGGKPLSGGKLTVDGSLLVEPSLLHLD 272 >gi|118602126|ref|YP_903341.1| hypothetical protein Rmag_0070 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567065|gb|ABL01870.1| hypothetical protein Rmag_0070 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 266 Score = 42.2 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 27/267 (10%), Positives = 77/267 (28%), Gaps = 28/267 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ L L ++ A V + D ++ ++ A ++ + + L Sbjct: 1 MKKIGYFLIGLIVIL---ALIVTVAFDPMG-KKYAQQYAQNLLKIPVTIS-QFSTSFLDK 55 Query: 62 PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS- 118 + I++ + + ++ ++ +S I + ++ D + Sbjct: 56 -RLNIDFIKVKNPPNFNNKYAFSLDHFVLKIS-DESISDLIVIDELSFDGISFVLEQNKT 113 Query: 119 ---------------KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 G + + + + + +V +KI + + + Sbjct: 114 NVNLVTLIDNLDKTSSGTTFSLSEEIQNIGNKRIKINQFYVTNITLKIDTKWLKETIKVP 173 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF---KITANFPAKNKAISLK 220 ++NLQ I + V+ + K +I K + S+K Sbjct: 174 NINLQKFGGGSGIALSQVGQELMTVVLKNIKDALEKKGIELGKKEIKETLMHKLRVDSIK 233 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIY 247 + ++ G K Sbjct: 234 EKFNLDKIKDSLNFSGTEELQNKAKDL 260 >gi|308270566|emb|CBX27178.1| hypothetical protein N47_A12070 [uncultured Desulfobacterium sp.] Length = 1091 Score = 42.2 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 88/276 (31%), Gaps = 35/276 (12%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 ++ K+I ++ + + L + + + L + + + + P + G Sbjct: 266 TLGLKNIAVNDTNN-LPFIRFSKLLFKIDDIQLPEKSVHLSAINLTSPEVYIRRDKSGEL 324 Query: 123 NWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 N +T ++ ++++ +KGG + + D V + +N Sbjct: 325 NLESVIPKTNTKGSETNTETQTFSLKIDQVELKGGILNLSD-----VLAVDTVNFLADNL 379 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA-KNKAISLKI---------- 221 L+ + I S + +G K A T + P + +++KI Sbjct: 380 NLSANNISYIQSQNKPPVFHASGTLGLKNIAVNDTKSLPLVRLSELTVKIADIKLPERNA 439 Query: 222 ---QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL-SGNFK 277 + + + I N +Q + G +K + K L SG F Sbjct: 440 HLSAIDLTSPEVYIRRDKAGELNSEQILKKINAENTGAKTKSKPFPVKIDKVELKSGVFS 499 Query: 278 ISDGN----VRISRYKLQSILPNSSTDEDNKTKVSQ 309 SD + V + L + T K +S Sbjct: 500 FSDVSTTDPVNLVADNLIISANDIDTTAGGKADLSF 535 >gi|220905217|ref|YP_002480529.1| hypothetical protein Ddes_1955 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869516|gb|ACL49851.1| hypothetical protein Ddes_1955 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 1070 Score = 42.2 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 21/222 (9%), Positives = 59/222 (26%), Gaps = 20/222 (9%) Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF---P 225 + + ++ GS K + + ++ ++ + Sbjct: 638 WFSGDGADGGQMDFTNLPGSFSLRMDAERSLKPDGLHVQTSGRFSGQSSRNELSVSEAHI 697 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF---------SKLLNLELSAKKSRLSGNF 276 + +L + P + G S L++ S + + F Sbjct: 698 NVLGVEAHGQASLASGKDGPFWQGKLSAYSPDIARTLRMAGMGRLSVPPSLNRIEVEARF 757 Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEE 336 + + + + + + + V E+ LNF N + D + Sbjct: 758 RGTPDTLTLREIRAK----TDQSVITGTLNVDWREQPALNFKLNADQINLDR----YMST 809 Query: 337 EEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378 K+ D ++ + + + S + F+ + Sbjct: 810 APAGKSKAGSKEWDFRFMRAFRAQGEMSVTRLTVMRFTVQNL 851 >gi|227536339|ref|ZP_03966388.1| penicillin-binding protein [Sphingobacterium spiritivorum ATCC 33300] gi|227243715|gb|EEI93730.1| penicillin-binding protein [Sphingobacterium spiritivorum ATCC 33300] Length = 694 Score = 42.2 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 25/262 (9%), Positives = 83/262 (31%), Gaps = 13/262 (4%) Query: 38 RQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS 97 + G + ++ +V FK++ + + + I+ ++ PLL Sbjct: 52 EKMDKKYGVDLKIQ---YYGFKGLATVVFKNVYVT-PKGKDQLAHIDDFAVSVRIWPLLF 107 Query: 98 GEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----RKSTMDMIHNVILEKIHVKGGRIKIID 153 G++++ + +++ + +SN+ + + G +K + Sbjct: 108 GDVKIGQIEMNKANFTLIK-KDSISNYDFLFKRKNKDSTDNPKAEKNLAALADGILKQVF 166 Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213 + + + D + + I G + ++ + + + Sbjct: 167 FKIPRNMDVQDFEVSFRDDSTYQRLRIPRAEISGG-DIDAALFLNDNDAQWNVAGYVNPD 225 Query: 214 NKAISLKIQLFPLAYPII-IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272 + ++LK+ + + + + + V ++L L L Sbjct: 226 RQELNLKLSSEQKDTEFPFLKSKFGVRLSFDEIEFDLN-KVDRKGKEMLTLRGDWHFKNL 284 Query: 273 S-GNFKISDGNVRISRYKLQSI 293 ++++SD ++ + L+ Sbjct: 285 KVHHWRLSDQDINLPEATLEGG 306 >gi|330813259|ref|YP_004357498.1| putative membrane-bound pili assembly protein Fimc [Candidatus Pelagibacter sp. IMCC9063] gi|327486354|gb|AEA80759.1| putative membrane-bound pili assembly protein Fimc [Candidatus Pelagibacter sp. IMCC9063] Length = 269 Score = 42.2 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 48/114 (42%), Gaps = 8/114 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++ LI L L +L+ + F D + + ++ G+++++ G I + L Sbjct: 1 MKKFLIYLSILIFAILI---FLKFFFDP-IAKSIISERLSVDTGREVSL-GKINTNFL-K 54 Query: 62 PSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113 S+ K+I+I + I + + + L SG I + + +LN Sbjct: 55 GSIQIKNIQIKNSPIFSRENLATISSIEGKLKLDMLTSGIINFSKISFENINLN 108 >gi|126657819|ref|ZP_01728972.1| hypothetical protein CY0110_13181 [Cyanothece sp. CCY0110] gi|126620759|gb|EAZ91475.1| hypothetical protein CY0110_13181 [Cyanothece sp. CCY0110] Length = 140 Score = 42.2 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 37/99 (37%), Gaps = 3/99 (3%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66 I + ++ +T F E+Q + ++ + I + ++ F S+ Sbjct: 28 IIIATTSVTLVFIGYTGLSFFLREYLPPWLEKQLSKVIYRPIEIG---ELEGFSFTSLQL 84 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDM 105 +D I + + S + + E + + L +L ++ Sbjct: 85 EDAYIPETTEYSSQLRAETIKVTFNPLTILLQRKLAVNI 123 >gi|127513101|ref|YP_001094298.1| hypothetical protein Shew_2173 [Shewanella loihica PV-4] gi|126638396|gb|ABO24039.1| protein of unknown function DUF490 [Shewanella loihica PV-4] Length = 1299 Score = 42.2 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 105/343 (30%), Gaps = 21/343 (6%) Query: 45 GKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFD 104 + ++G I + + + +++D E LS R + L G++ V Sbjct: 537 QYPLRLQGDI--SLNDKFQLNAEHLQLDALESQLT------LSGRVDDAWALDGQLSVPA 588 Query: 105 MYIDQPH----LNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR-IKIIDQESDQV 159 + + P + ++ G + I V + I + Sbjct: 589 LSLWDPSASGAIKAVINVSGDDE-HPEVAINADTIEFKYADITVDKAKLIAFYRPQDAHQ 647 Query: 160 YFLSDLNLQISAR---FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216 + LS + I + ++ D K + + G+ S + A Sbjct: 648 FALSLKSSGIKGQGMALSDLTLGFKGDIAKQKLGLQTYGDLQLNTSIASTFDEKTQRFDA 707 Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV---FSVAGDFSKLLNLELSAKKSRLS 273 +I L + +D +L+W+ K + L + K Sbjct: 708 KIKRISLNSRLGAMALDEPFDLYWDNKHAKGEISPFCWRHDAASLCLTDTAELGDKGDTR 767 Query: 274 GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 F G + +++ T D + + ++ + + A DL T Sbjct: 768 LQFAGDLGALLAPVLP-ENLKWRGPTQLDGELQWAKGAKPTGQLTLAMAPGQFDLTTTKR 826 Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376 E + N + D++Q +++ + E + ++Q S D Sbjct: 827 HIEAQYHYLNLTARLDELQLAIDTQLESERFAKIDSQLTISTD 869 >gi|21241318|ref|NP_640900.1| hypothetical protein XAC0547 [Xanthomonas axonopodis pv. citri str. 306] gi|21106643|gb|AAM35436.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 813 Score = 42.2 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 35/355 (9%), Positives = 92/355 (25%), Gaps = 39/355 (10%) Query: 31 DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE----------DGSFE 80 F Q + +++ ++G ++ + F + + I Sbjct: 223 QFDRIVAEQVQAVSLRQLHIEGQGQLQLGLFKRLRGGPMEIFPSRAVFESTRVRWGQDEV 282 Query: 81 SKIEGLSMRAEFL----------PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 + L + A +L + ++ D L+ ++G R Sbjct: 283 MRNGQLRIEASIARHAPEQASGQAVLQFTDALIAVHGDTAALDVARDAQGRHTLATRPGK 342 Query: 131 MDMIHNVILEKIHVKGG-----RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 + + ++ G R + D Q L +L Q+ ++ + Sbjct: 343 GRADGELRWIRGALQPGSQLQWRAPLHDGTRAQAALLGELTAQLQVDQNMRLTVSMPEPA 402 Query: 186 KGSVIAEGTGNFDNKRSAF-KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 + + ++ + + P + L QL L++ Sbjct: 403 DAGLTLDADVRVQGRQLPVQSMRSLLPRTSGHARLHWQLSSLSW-----------IAALF 451 Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 P ++ G+ +L + + ++ ++ +I +S D Sbjct: 452 PDVD-WLTLEGEGLVDADLRIDRGQLGAGSRLQVPHVQAQVGVM-GHAITGQASADLRVD 509 Query: 305 TKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359 + L H T F + + + D + + Sbjct: 510 ADANGQLLPALALQMQQFSIAHTDAPTRPFVQGRDLRLDLKTRADARNLASLRDA 564 >gi|126665505|ref|ZP_01736487.1| hypothetical protein MELB17_22970 [Marinobacter sp. ELB17] gi|126630133|gb|EBA00749.1| hypothetical protein MELB17_22970 [Marinobacter sp. ELB17] Length = 911 Score = 42.2 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 30/339 (8%), Positives = 79/339 (23%), Gaps = 40/339 (11%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 S + + + L + + + + + + N + G Sbjct: 506 SASVTGLETRLPGNSQPLLAWQTLQLAPIEYNVNPARLEIGRVTLIDLAANIIRNDDGSH 565 Query: 123 N------------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + + + + ++ + + D+ LQ + Sbjct: 566 DITNLLTLAPAGKPAAADANENQGFIFRIGELQLDNADVDYTDRTLKPELTTRFGQLQGN 625 Query: 171 ARFLNIISPLSID-SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 L+ I P S+KG V G + + + ++L+ P P Sbjct: 626 LSGLSNIPPQQGRVSLKGKVNQVGNLDMSGSIATL---GTDQQSDLVLNLENLELPRLSP 682 Query: 230 I------------IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 +DL + + S + A + Sbjct: 683 YSGRYLGYGIAGGKLDLKLDYQLQGTRINASNQIILNRLELGQPMPSEQAVGVSIKLGLA 742 Query: 278 ISDGNVRISRYKLQS-ILPNSSTDEDNKT-------KVSQDEENLLNFSENGAESMH--- 326 + + + + K +++ + A+ Sbjct: 743 LLRDGNNVIELNVPVNGDLADPEFQMGKVMMRAFVNVLTKAATSPFALIGTLADIAGLGG 802 Query: 327 -DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364 + + F + + K + +N+K E S Sbjct: 803 EQMQQVSFAPGGVELTEASTQKLAALAQVLNQKPELILS 841 >gi|190573517|ref|YP_001971362.1| putative penicillin acylase 2 [Stenotrophomonas maltophilia K279a] gi|190011439|emb|CAQ45057.1| putative penicillin acylase 2 precursor [Stenotrophomonas maltophilia K279a] Length = 775 Score = 42.2 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 28/387 (7%), Positives = 94/387 (24%), Gaps = 55/387 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR + + +++ V + + A + + + ++ Sbjct: 1 MRRTWRWVLGVLVAIVLVTALVLWLLLRGSLADLDGEHALPGLARPVTIERD-------- 52 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + I + + + + +M + + S+ G Sbjct: 53 ---ALGVVTITATSQADAMRALGRVHAQERYF----------EMDLMR------RSAAGE 93 Query: 122 SNWFQRKSTMDMIHNVILEKIHVK---GGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + +D + + ++ + + + D ++ +N ++ + + Sbjct: 94 LSALFGPKAIDADKRMRVHRLRARTEANMQAALGDNVEAVSAYVGGVNEGLAGLSVRPWA 153 Query: 179 PLSIDSIKGSVIAE----------GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 L + A ++ ++ A+ I + Sbjct: 154 YLLLRQSPQPWQASDSVLTGLAMYADLQDPGNQTELALSRIRAVVPPALYALIAHDGTEW 213 Query: 229 --PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 P+ + GN + + + + + ++G + Sbjct: 214 DAPLFGEPTGNAALPDASQLDLRTLHAKPGTEQEEADVIGSNNFAVAGALTADGRAIVAD 273 Query: 287 RYKLQSILP----------NSSTDEDNKTKV---SQDEENLLNFSENGAESMHDLNETDF 333 L P + V S + NG + N Sbjct: 274 DMHLGLRAPGLWFRVRLRYPDPQAAGGQVDVTGFSLPGLPAVIVGSNGHVAWGFTNSYID 333 Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKKEE 360 + + N + + + +V + + Sbjct: 334 TADYRTEPANAAVTVHEERIAVAGQAD 360 >gi|254457287|ref|ZP_05070715.1| conserved hypothetical protein [Campylobacterales bacterium GD 1] gi|207086079|gb|EDZ63363.1| conserved hypothetical protein [Campylobacterales bacterium GD 1] Length = 1198 Score = 42.2 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 46/386 (11%), Positives = 104/386 (26%), Gaps = 55/386 (14%) Query: 27 IDWTDFREDFERQATLIVG------KKIAVKGGIKIHIL----------PFPSVFFKDIR 70 D FR + A + ++ V K+ +L ++ Sbjct: 445 FDIVRFRPYIDEAAQDALSVYDVKLQRATVGFDAKVSVLALEDETQVSVSDANLNLSKFA 504 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF----- 125 I+++ G + L + + + + + ++ L G N Sbjct: 505 INKRSTGERLVDFADFGVNNLSLDTKAKAVNIENTTLKSLNIRTGLYKDGKLNVDNLIVA 564 Query: 126 ------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF--LSDLNLQISA 171 + K+ + + V L+ ++ R+ D+ L +N Sbjct: 565 KKAKTTKVATSKKSKTKDESEYRVKLKHFALQSARVSFSDKTLKPTLNTKLDRINFNAYN 624 Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231 + L+ S+ + ++G K + K ISLK + Sbjct: 625 IDSEKKTWLNY-SLSARLNSKGYAKAKGKLRHTPLRQTGTFDLKKISLK------EFSPY 677 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSK-LLNLELSAKKSRLSGNFKISDGN-VRISRYK 289 I+ L N+ A L + + N + + + Sbjct: 678 IEKDLYLKLNDGYVDLKTKVEYAKSTETADLKVNGRLDINEFFLNDSRDNSTLLSFNNMA 737 Query: 290 LQ----SILPN----SSTDEDN---KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE 338 L+ S+ P+ + D + + + + + D N T + E+ Sbjct: 738 LKSFDYSMSPDRAFVNELDINGFYVNALIDETKTMNFATLSKAPKVQSDANATKVAQSED 797 Query: 339 KKNKNDDLKKDDIQYSVNKKEEKDNS 364 K + + + D S Sbjct: 798 TNATKFPFKIMKLNVASGSAKFADLS 823 >gi|86359431|ref|YP_471323.1| hypothetical protein RHE_CH03849 [Rhizobium etli CFN 42] gi|86283533|gb|ABC92596.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 2139 Score = 42.2 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 46/403 (11%), Positives = 99/403 (24%), Gaps = 36/403 (8%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R +G + + + R ER A+ + + + ++ +L Sbjct: 13 RVTGYAVGAILVLAVAALAIFGFT--SFGARIVTERIASTLSNRDMTIEVREPEGLLTG- 69 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + +I + ++I G+++ L LL+G ID + K V Sbjct: 70 GLRAAEISLSDTRG--VFAEIHGVAIDWNPLALLTGTFHAKRFQID----TISVLRKPVR 123 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGR---IKIIDQESDQVYFLSDLNLQISARFLNIISP 179 R + + + K+ V IK+ + + + + L+ + Sbjct: 124 TLPSRPNAENSGGFALPVKVDVDHMALPDIKLAEAFAGRAFALAAEGSLSADGDGGEAMV 183 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 + + ++ A + P + IDL G Sbjct: 184 NVSRHAVPDARLTADIAYAPAENRLRLKAQLAEPKGGLLAGFLGLPGNPAVNIDLDGQGP 243 Query: 240 WNEKQPIYSGVFS------------VAGDFSKLLNLELSAKK---------SRLSGNFKI 278 + ++ D L+L+ +G I Sbjct: 244 ISNWAGKMQAALDGQQRAAIEGRHAISADGLHHLDLKGGGDLSSLLPAAFRPLFAGQTNI 303 Query: 279 SDGN--VRISRYKLQSIL-PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335 + +Q+ S + N LN + G D Sbjct: 304 DVAATFDDRGKIDIQTGNIATGSVVIAASGALDPAGNNSLNANLLGTSGPVDFRWPLAEG 363 Query: 336 EEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378 E +L + Q + K+ Sbjct: 364 EARFLISGLNLALTGDAQTARLSLSGSLDSATLPQADIGNVKL 406 >gi|161505086|ref|YP_001572198.1| hypothetical protein SARI_03220 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866433|gb|ABX23056.1| hypothetical protein SARI_03220 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 1259 Score = 42.2 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 35/359 (9%), Positives = 97/359 (27%), Gaps = 49/359 (13%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 +++ +G+ ++L + + G + +P Sbjct: 5 KKISLGVLIFIVLLLASVAFL----------------VGTMTGLHLVFSAAN--RWVPGL 46 Query: 63 SV-----FFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + ++D+ + + + L + V D+ + ++ Sbjct: 47 EIGQVTGGWRDLSLKNIRYEQPGVAVNAGEIHLAVGLDCLWHSTLCVNDLALKDINVAID 106 Query: 116 -----LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 S + + V L ++ + IKI D +S L+ Sbjct: 107 SKKMPPSEQAQEEEDSGPLNLSTPWPVTLSRVALNNINIKIDD------TTVSVLDFTSG 160 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + + L ++G +IA ++ + P ++ + A P+ Sbjct: 161 LAWQDKNLTLKPTRLQGLLIALPKVADVAQKEVVEPKIEKPQPDEKPLGETLKDLFAKPV 220 Query: 231 IIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 + ++ +L N + G + L + K S + GN K+ ++ ++ Sbjct: 221 MPEMTDVHLPLNLNIESFRGEQLRVTGDTDLTVRTMLLKVSSIDGNMKLDTLDIDANQ-- 278 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGA-ESMHDLNETDFFEEEEKKNKNDDLK 347 ++ + N E + + ++ Sbjct: 279 ---------GTVKASGTAQLANNWPVDITLNSTLNIDPLKGEKIKLKVGGALREQLEVG 328 >gi|332716399|ref|YP_004443865.1| hypothetical protein AGROH133_11933 [Agrobacterium sp. H13-3] gi|325063084|gb|ADY66774.1| hypothetical protein AGROH133_11933 [Agrobacterium sp. H13-3] Length = 333 Score = 42.2 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 82/294 (27%), Gaps = 33/294 (11%) Query: 6 LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK-GGIKIHILPF-PS 63 + LG V+++G +T F ++ + + ++ + G I PF Sbjct: 13 FLWLGI-AVVLVIGLYTAGWFYAADKLKQTVLNVISPSQARNVSGECGDIAFKGYPFRIG 71 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 +F + +D K++G + L A+ G I +D P + + Sbjct: 72 LFCSKVTVDDKQNGV-SASFGELRSAAQVYNP--GHIV---WELDAPA---EIRTAHGLT 122 Query: 124 WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 M L I + L Q + Sbjct: 123 VSALWQNMQSSIVTKLRGID-------------RTSLVIDGLKAQAVSTVTGQTIDFDAA 169 Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243 + + G T L + L G + Sbjct: 170 KTEMHLRQNGADLDGAITLTDSSTVIKDWPQLLPRLNAIAD-------VTLAGKAGMVDG 222 Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297 +G++ +G+ +L+ + R+SG F + ++KL+ ++ Sbjct: 223 S-DTAGLYGASGELRRLVADIGEGRTMRISGPFSFDNEGYLSGQFKLEIEKLDA 275 >gi|325300369|ref|YP_004260286.1| glycosyl transferase family 51 [Bacteroides salanitronis DSM 18170] gi|324319922|gb|ADY37813.1| glycosyl transferase family 51 [Bacteroides salanitronis DSM 18170] Length = 643 Score = 42.2 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 41/110 (37%), Gaps = 3/110 (2%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGK-KIAVKGGIKIHILP 60 ++R L G ++ V + + R +R+ + + I + + + + Sbjct: 1 MKRRLKQFGIWIALFTVLSGAGLFLLRGPLLRHIADRRIEALSARYGIRIA-YVSLKMPS 59 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110 SV + + + ++ ++ +FLPLL G + + + + Sbjct: 60 LTSVRVEGLSMV-PFGRDTLLRLASAEVKLDFLPLLRGNLSIRKVDTEGL 108 >gi|146340339|ref|YP_001205387.1| hypothetical protein BRADO3366 [Bradyrhizobium sp. ORS278] gi|146193145|emb|CAL77157.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278] Length = 681 Score = 41.8 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 31/330 (9%), Positives = 84/330 (25%), Gaps = 46/330 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV-----GKKIAVKGGIKI 56 ++R+LI + + + G VP + + ER+ A G + Sbjct: 11 MKRILIATVAVVVLGIAGLVGVPWY-----AQSRAEREVEASFAQIRQNGATASHGKVAF 65 Query: 57 HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ------- 109 + + D++++ ++ + + + Sbjct: 66 DLWSR-KLTIADVKVESAAQPPASISFGAITA-MGLSQPDGDHVAASSIELSDVAMSGQM 123 Query: 110 ------------PHLNFYLSSKGVSNWFQRKSTMDMIHNVI--LEKIHVKGGRIKIIDQE 155 P + G + + + +++ I+ + Sbjct: 124 PGPSAIRLSYKLPQIVL-KDYAGPVRFAALPAGSGPLETYRTLMQQFATISASSIILPRA 182 Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG---TGNFDNKRSAFKITANFPA 212 + + D S +G T + + A P Sbjct: 183 EGTMEGGPAAAAPAEFTYSGFTIDNIKDGRIASYKLDGLAFTMSMQQPANKLAAGAGQPG 242 Query: 213 KNKAISLKIQL----FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268 + + + ++ A ++ L +++ G + S Sbjct: 243 RIEKLQGRVTDIVHHDIDANAMLAVLSPEAAKDDRVYRVYGRVTAGAYEVN----SDSGV 298 Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSS 298 + R+ G + +VR SR +L ++ Sbjct: 299 RMRMEG-ISADEFSVRPSRLQLPALFAALP 327 >gi|290473311|ref|YP_003466177.1| hypothetical protein XBJ1_0228 [Xenorhabdus bovienii SS-2004] gi|289172610|emb|CBJ79379.1| conserved hypothetical protein; putative exported protein [Xenorhabdus bovienii SS-2004] Length = 603 Score = 41.8 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 38/327 (11%), Positives = 100/327 (30%), Gaps = 33/327 (10%) Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P++ KD+ I + ++ L + L L++G G+ Sbjct: 248 PAIHVKDLNITNAKLQGKNWSVDYLDTTIKNLGLVNGSWEA---------------KDGL 292 Query: 122 SNWFQRKSTMDMIHNVI-LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 ++ + L ++H G + + L ++ + + + Sbjct: 293 IDFNVMNMAFNNAQFSNTLGQLHFSGDTFTVAHLTTHYQKGLFNIQSEWDRKNRQLTFNN 352 Query: 181 -SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 S+ + + + N + + +L I + P + L G++ Sbjct: 353 SSVTGLVYDLPPTWRNDIKNAAPGWISGLTLNDISVNNTLLIDVNPDFPFQLTTLSGHV- 411 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS---GNFKISDGNVRISRYKLQSILPN 296 + + +G + + + L + K ++ +D + I + L + + Sbjct: 412 -DTMNILKNGRWGLWEGQASLQAASGTFNKIEITRPYLQLHATDDRLTIDK--LNAFNGH 468 Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-------EEEEKKNKNDDLKKD 349 + ++ + G + + + E +L D Sbjct: 469 GLLQASGSAEQQTAQKP-FELNFKGMNADLGILPRWGWIPLTMQGEGNFSLALTGNLSAD 527 Query: 350 DIQYSVN-KKEEKDNSHDKENQENFSG 375 DI+ ++N +D S +K++Q G Sbjct: 528 DIKGTINGTLTAEDKSSNKDSQSIVQG 554 >gi|238750098|ref|ZP_04611601.1| hypothetical protein yrohd0001_6780 [Yersinia rohdei ATCC 43380] gi|238711642|gb|EEQ03857.1| hypothetical protein yrohd0001_6780 [Yersinia rohdei ATCC 43380] Length = 1246 Score = 41.8 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 40/345 (11%), Positives = 104/345 (30%), Gaps = 47/345 (13%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL + DFR + Q I G+++ + G + + + + Sbjct: 203 AMFAKPLLPELPDFRLPLDIQINEISGQQLRLTGDTDVLVSSVLLRANIQENHITLDTLD 262 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVF-------DMYIDQP---HLNFYLSSKG 120 I + G L+ + +++ + + + + L ++ G Sbjct: 263 IKSPQGGLSARGEAKLADKWPLTMVVNSALNIEPLKGEKVKLTVGGALREQLKVAINLSG 322 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 T + L + ++ +++ + + L +L ++++ + + + Sbjct: 323 PVTAQLEAETALAQAGLPLA-LTLQSKQLRWP-LSGEPQFQLDNLRMRLNGQATDFALSI 380 Query: 181 SIDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDL 234 D +G GN + ++ N ++ + +++ ++ L Sbjct: 381 RSDFKGTDLPPAVFTLDGKGNVEQFNLT-RLRLAALQGNTDLTGVVDWSKAISWNSVLTL 439 Query: 235 FG---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD--- 280 G W E G G L L+ + K++R+ ++ Sbjct: 440 SGINTAKQWPEWPAKLDGKIVTRGSLHGGSWQLQVPELMLDGNVKQNRVIARGSLTGNAA 499 Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 G I L + D S + L+ + + + Sbjct: 500 GQWNIPSINLALGR--NKLDVKG----SLADNWQLDANVDAPQLD 538 >gi|327395397|dbj|BAK12819.1| periplasmic protein YtfN [Pantoea ananatis AJ13355] Length = 1255 Score = 41.8 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 112/361 (31%), Gaps = 52/361 (14%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 ++VLIG ++ G + G + +KG +P Sbjct: 5 KKVLIGFLIFLVLLFAGLAFLIGTTP----------------GLHLVLKGAS--RWVPGL 46 Query: 63 SVF-----FKDIRIDQKEDGSFESKI--EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 S+ ++++ + + + + + LL + V D+ + ++ Sbjct: 47 SINKVDGGWRNLTLSGLRYEMPGVSVNAGNIHLAVDLNCLLHSSVCVNDLTLRD--ISVV 104 Query: 116 LSSKGVSNWFQRKSTM------DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 + SK ++ + + L + + +K+ D +S ++ Sbjct: 105 VDSKKMTPSTAPPEEESGKTNLSTPYPITLRHVGLHNINVKVDDTA------ISLVDFTT 158 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 ++ + L+ I+ +IA K + P ++ + A P Sbjct: 159 GLQWQDRALTLNPTHIQSLLIALPKAAQVAKEQVVQPKIQQPKPDEKPLGETLQAMFAKP 218 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 ++ +L P + + L ++ ++ + + Sbjct: 219 LLPEL----------PDFQLPLDIDVQDIVGEQLRITGDTDITVSRLQVKAKTLD-RHMQ 267 Query: 290 LQSILPNSST-DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 LQ++ +S+ + + + + ++ + NG + D + + K D+LK Sbjct: 268 LQTLAVDSNLGKLNGSGQATLADNWPVDLTLNG-DVNVDPVKGEKLNLTVKGAMRDELKL 326 Query: 349 D 349 Sbjct: 327 A 327 >gi|167949558|ref|ZP_02536632.1| hypothetical protein Epers_25030 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 187 Score = 41.8 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 41/135 (30%), Gaps = 16/135 (11%) Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN--V 137 L + + LL+G I V + + L ++ +NW S Sbjct: 1 MISARELQLSLSPMALLAGRIEVAEGRLLGADLRLERATDNANNWQFGASGGSSSGASLP 60 Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197 + +I + + ++ L+ ++ ++ A G G + Sbjct: 61 EIPRIQIDDSLLSYLEDGVLHRLELTSVSGRLGA--------------TGHFELFGDVRY 106 Query: 198 DNKRSAFKITANFPA 212 + + +FPA Sbjct: 107 RSIPMNGRYVIDFPA 121 >gi|148546559|ref|YP_001266661.1| hypothetical protein Pput_1317 [Pseudomonas putida F1] gi|148510617|gb|ABQ77477.1| hypothetical protein Pput_1317 [Pseudomonas putida F1] Length = 357 Score = 41.8 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 67/209 (32%), Gaps = 16/209 (7%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R L+GL L +++ +P + R+ + + + V + + Sbjct: 6 RWPLVGLASLIVLLVALHLALPYLV-----RDYLNDKLADMGDYRGQVA-DVDLAWWRG- 58 Query: 63 SVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + ++I + + + + L + V ++ P LNF Sbjct: 59 AYQINGLKIVKTTGKVPVPFLDAPLIDLSVSWHALWYDKAVVAEVTFVHPELNFVDGGSK 118 Query: 121 VSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL-- 174 ++ + + + + L ++ + G + + S L L S R L Sbjct: 119 QASQTGQGTDWRQQLEKLLPITLNEVRIDNGVLTFRNFNSKPPVDLKATRLNASIRNLTN 178 Query: 175 -NIISPLSIDSIKGSVIAEGTGNFDNKRS 202 S +G+ + G N +++ + Sbjct: 179 VRDQKGRRDASFEGTALIAGDANVESRAT 207 >gi|327290092|ref|XP_003229758.1| PREDICTED: neuroblast differentiation-associated protein AHNAK-like [Anolis carolinensis] Length = 5352 Score = 41.8 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 41/342 (11%), Positives = 105/342 (30%), Gaps = 55/342 (16%) Query: 60 PFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPL-----------LSGEIRVFDMY 106 P + + I+ E + + K+ ++++A + + + G++ V Sbjct: 1778 PKLDIDAPAVDIEGPEGNWKTPKFKMPEMNIKAPKISMPDVDFNLRGPKIKGDVDVSAPK 1837 Query: 107 IDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIID-QESDQVYFLSDL 165 ++ P ++ + ++ + + VKG + ++ D + D+ Sbjct: 1838 LEGPDIDIK---------GPKLDIDAPGLDIEVPEGKVKGPKFRMPDMHFKTPKISMPDI 1888 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 +L + + +S+ + G+ + L+ Sbjct: 1889 DLNLKGPKVKGDVDVSV--------PKLEGDLKGPNIDIHGP-KLDVDVPDVELEGPEGK 1939 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 L P + + + F++ G K +L +L G+ K D +++ Sbjct: 1940 LRGPKFKMPDMHFKAPK-ISMPDVDFNLKGPKLKG---DLDVSVPKLEGDLKGPDFDIKG 1995 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLL---NFSENGAESMHDLNETDF--------- 333 + + + + + K K+ + + +F G + L + D Sbjct: 1996 PKLDIDAPDVDL-HGPEGKLKMPKFKMPKFGMPSFKGEGPDVDLSLPKADVDASLPKVDL 2054 Query: 334 ------FEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369 E E K K K D+ + K D + + Sbjct: 2055 EGPSLDVEGPEGKLKGPKFKMPDMHFKTPKISMPDIDLNLKG 2096 Score = 41.4 bits (95), Expect = 0.25, Method: Composition-based stats. Identities = 40/353 (11%), Positives = 101/353 (28%), Gaps = 68/353 (19%) Query: 47 KIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI----EGLSMRAEF-LPLLSGEIR 101 + ++G L P D+ + + + L + +P L G+++ Sbjct: 3248 DVEIEGPEGK--LKGPKFKMPDLHFKAPKISMPDLDMNLKGPKLKGDVDVSVPKLEGDLK 3305 Query: 102 VFDMYIDQPHLNFYL------SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE 155 D+ I P L+ G + K + Sbjct: 3306 GPDVDIKGPKLDIDAPDVEIEGPDGKWKGPKFKMPDMHFKTPKIS--------------- 3350 Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215 + D++L + + +S+ ++G + + + + + + Sbjct: 3351 ------MPDIDLNLKGPKVKGDVDVSVPKLEGDLKGP-NIDIQGPKLDVDV---PDVELE 3400 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY-SGVFSVAGDFSKLLNLELSAKKSRLSG 274 K++ P L + F++ G K +L +L G Sbjct: 3401 GPEGKLRGPKFKMP-------ELNIKAPKISMPDVDFNLKGPKLKG---DLDVSVPKLEG 3450 Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL----------NFSENGAES 324 + K D +++ + + + + + K K+ + + + + ++ Sbjct: 3451 DLKGPDLDIKGPKLDIDAPDVDL-HGPEGKLKMPKFKMPKFGMPSFKAEGPDVDVSLPKA 3509 Query: 325 MHDLN--------ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369 D++ + E E K K K D+ + K D + + Sbjct: 3510 DLDVSLPKVDLEGPSLDVEGPEGKLKGPKFKMPDMHFKTPKISMPDIDLNLKG 3562 Score = 41.0 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 42/347 (12%), Positives = 106/347 (30%), Gaps = 45/347 (12%) Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL----PLLSGEIRVFDMYIDQPHLNFY 115 P + D+ + E K + P + + ++ I P L+ Sbjct: 2874 PKVDIDVPDVDLHGPEGKLKMPKFKMPKFGMPGFKGEGPSVDVNLPKGEVDISAPKLDIE 2933 Query: 116 LSS---KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE--SDQVYFLSDLNLQIS 170 +G + + + KI + + + + D + N+++ Sbjct: 2934 TPDLEIEGPEGKLKAPKFKKPDMHFNVPKISMPDIDLNLRGPKIKGDVEGDIKGPNVELK 2993 Query: 171 ARFLNIISP-LSIDSIKGSVIAEG-TGNFDNKRS---AFKITANFPAKNKAISLKIQLFP 225 +++ +P + I++ + NF + + P + + Sbjct: 2994 GPDIDLEAPKIDIEAKPKKSRFKLPKFNFSGPKVHTPEVDVKLKKPDVDVSGP-----KL 3048 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS----DG 281 +DL G + +++ + ++EL+ K +L G+ +S +G Sbjct: 3049 DVQGPDVDLQGKVK---GSKFKMPSLNISSPKVSVPDVELNLKAPKLKGDLNVSSPSLEG 3105 Query: 282 NVRISRYKLQSILPNS---STDEDN---KTKVSQDEENLL-----NFSENGAESMHDLN- 329 +++ ++ + D K K+ + + N ++ D+ Sbjct: 3106 DLKGPDIDIKGPKLDIAAPDVDLHGPEAKLKMPKFKMPKFGMKGPEVDLNLPKADLDVTG 3165 Query: 330 -----ETDFFEEEEKK--NKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369 ET E E + K K D+ + + K D + + Sbjct: 3166 PKMDIETPDLEIEGPEGKIKGSRFKMPDMNFEMPKISMPDIDLNLKG 3212 Score = 41.0 bits (94), Expect = 0.30, Method: Composition-based stats. Identities = 39/328 (11%), Positives = 92/328 (28%), Gaps = 43/328 (13%) Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 P + D+ + E K + P GE D+ + P + +S Sbjct: 3738 PKLDIDAPDVDLHGPEGKLKMPKFKMPKFGM---PGFKGE--GPDVDVSLPKADLDVSLP 3792 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 V + K + + D +L + + Sbjct: 3793 KVDLEAPSLDVEGPEGKLKGPKFKMPDMHF------KTPKISMPDFDLSLKGPKVKGDVD 3846 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 +S+ ++G + + + + L+ L P N+ Sbjct: 3847 VSMPKLEGDFRGP-DFDIKGPKLDVDVP--------DVELEGPDAKLRGPKFKMPEMNIK 3897 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 + + F++ G K +L +L G+ K D +++ + + + + Sbjct: 3898 APK-ISMPDVDFNLKGPKLKG---DLDVSVPKLEGDLKGPDFDIKGPKLDIDAPDVDL-H 3952 Query: 300 DEDNKTKVSQDEENLL----------NFSENGAESMHDLN--------ETDFFEEEEKKN 341 + K K+ + + + + ++ D++ + E E K Sbjct: 3953 GPEGKLKMPKFKMPKFGMPGFKAEGPDVDVSLPKADLDVSLPKVDLEGPSLDVEGPEGKL 4012 Query: 342 KNDDLKKDDIQYSVNKKEEKDNSHDKEN 369 K K D+ + K D + + Sbjct: 4013 KGPKFKMPDMHFKSPKISMPDMDFNLKG 4040 Score = 38.7 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 43/366 (11%), Positives = 97/366 (26%), Gaps = 66/366 (18%) Query: 49 AVKGGIKIHI---------------LPFPSVFFKDIRIDQKED------------GSFES 81 +KG + + + P + D+ + E G Sbjct: 3914 KLKGDLDVSVPKLEGDLKGPDFDIKGPKLDIDAPDVDLHGPEGKLKMPKFKMPKFGMPGF 3973 Query: 82 KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEK 141 K EG + ++ + + ++ P L+ G + + K Sbjct: 3974 KAEGPDVDVSLPKA-DLDVSLPKVDLEGPSLDVE----GPEGKLKGPKFKMPDMHFKSPK 4028 Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI----AEGTGNF 197 I + + + +S + + + I + EG Sbjct: 4029 ISMPDMDFNLKGPKLKGDLDVSAPKFEGDLKGPDFDIKGPKVDIDAPDVDLHGPEGKLKM 4088 Query: 198 DNKRSAFKITANFPAKNKAISLKI-QLFPLAYPIIIDLFG-NLFWNEKQPIYSG------ 249 + F A+ + + + + +DL G +L + G Sbjct: 4089 PKFKMPKFGMPGFKAEGPDVDVSLPKADLDVSLPKVDLEGPSLDVEGPEGKLKGPKFKMP 4148 Query: 250 -------VFSVAGDFSKLLNL----ELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 FS+ L ++ +L G+FK D +++ + + + Sbjct: 4149 DMHFKTPKFSMPDIDLNLKGPKVKGDVDVSMPKLEGDFKGPDFDIKGPKLDVDVPDVDLE 4208 Query: 299 T---DEDNK--------TKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347 K + +N + G + D++ + E + K + DLK Sbjct: 4209 VPDPKLKGPKFKMPDMHFKTPKISMPDMNLNLKGPKVKGDMDVSVPKLEGDLKGPDIDLK 4268 Query: 348 KDDIQY 353 I Sbjct: 4269 GPQIDL 4274 >gi|258404565|ref|YP_003197307.1| hypothetical protein Dret_0432 [Desulfohalobium retbaense DSM 5692] gi|257796792|gb|ACV67729.1| protein of unknown function DUF490 [Desulfohalobium retbaense DSM 5692] Length = 1448 Score = 41.8 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 32/256 (12%), Positives = 79/256 (30%), Gaps = 21/256 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58 ML+R+ F L+ + + R I A+ I++ + Sbjct: 1 MLQRLFRVFIFGLVAGLLLLGGIWAGLQTEYGRSTLLHAVEYIT----ALTSPIELELEG 56 Query: 59 ----LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 P SV + + + E + + ++ L G + ++ + Sbjct: 57 LGSGFPG-SVRLERLELADANG--TWMAAEAIGLDWDWSALWHGRLHGERLFAREIVWY- 112 Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 D +L ++ ++ I + D L+ + Q R Sbjct: 113 ------RPPQTPPDPEQDTPPWWLLSRLSLESLSIPKLTVAGDHPAALA-VKGQFDGRPE 165 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 + + L+ +++G G F +++A+++T A+ + ++ P + + Sbjct: 166 ALRANLAAKALQGKDTLRLNGRFTPEQAAYELTLETTAEAQGPLARLTRLPGPWHGRLQA 225 Query: 235 FGNLFWNEKQPIYSGV 250 G + G Sbjct: 226 NGTRRRGSGTARFKGE 241 >gi|260820964|ref|XP_002605804.1| hypothetical protein BRAFLDRAFT_84409 [Branchiostoma floridae] gi|229291139|gb|EEN61814.1| hypothetical protein BRAFLDRAFT_84409 [Branchiostoma floridae] Length = 3776 Score = 41.8 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 36/333 (10%), Positives = 88/333 (26%), Gaps = 44/333 (13%) Query: 59 LPFPSVFFKDIRIDQKEDGSFE----SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 P K + + + + ++ + E + ++ D+ ++ P +N Sbjct: 2257 FGKPDFDIKGPKFRGPDWKMPKFGGKADVDLPEAQLEGPDV---KLEGPDVDLEGPDINL 2313 Query: 115 -YLSSKGVSNWFQRKSTMDM---------------------IHNVILEKIHVKGGRIKII 152 +KG W K +V ++ + G + + Sbjct: 2314 GSPDAKGGFKWKGPKFGKPDFHMKKPTFKSPSFRWKGKKVKSPSVEIDAPSAEIGALNLE 2373 Query: 153 DQ-----ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207 + D+ L+ ++ S D + FD ++ F+ + Sbjct: 2374 TPGLDINAPKVSGEVPDVELESPGFKGKSMTLGSPDLELEGPTLKSPSWFDRMKAKFRGS 2433 Query: 208 ---ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLLNL 263 + + L P + ++ V G L Sbjct: 2434 GRFSGPDFNGPEAKFRTPSGNLEGPDVTINSPDMNLEGPDLDIDSPDLDVKGPDVDLKGP 2493 Query: 264 ELSAKKSRL------SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317 ++ K R S +F + N++ + + + + E +L Sbjct: 2494 KMKGPKFRFGKPKFKSPDFHMKGPNLKGPSFGGRLSGEFEPPNVGGDVDIGIAEAEVLVP 2553 Query: 318 SENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350 + ++ + K K+ LK D Sbjct: 2554 DAEIPDWDVNVEGPEVEGGLSGKFKSPKLKGPD 2586 Score = 39.5 bits (90), Expect = 0.84, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 83/298 (27%), Gaps = 37/298 (12%) Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-----LSSKG 120 K R + + + +A L G++ ++ I+ P +N + +G Sbjct: 2725 VKGGRFKMPKFKGPDFSMPKFGGKAGV-DLPEGKLEGPNVDIEGPDVNLEGPEVDVDLEG 2783 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + K M I + +K + + + ++ I +N+ P Sbjct: 2784 -PDMKGGKFKMPKIKGPDISMPSMKMPKFGMKSNIDLPEGEVRGPSVDIEGPDVNVEGPD 2842 Query: 181 SIDSIKGSVIAEGTGNFDNKRSA-FK-ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 ++G + G + F + P + + + P +DL G Sbjct: 2843 VDVDLEGPDVKGGKFKMPKFKGPDFSMPSIGMPKFGGKADIDLPEGEVRGP-SVDLEGPD 2901 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 E + G K K + G + + SI Sbjct: 2902 VNVEGP---DVDVDLEGPDVKGGKF----KMPKFKG-----------PDFSMPSIGMP-- 2941 Query: 299 TDEDNKTKVSQ--DEENLLNFSENGAESMH---DLN-ETDFFEEEEKKNKNDDLKKDD 350 K + E + G + D++ + + + + K K K D Sbjct: 2942 -KFGGKADIDLPEGEVRGPSVDLEGPDVNVEGPDVDVDLEGPDVKGGKFKMPKFKGPD 2998 >gi|225166361|ref|ZP_03728039.1| hypothetical protein ObacDRAFT_5202 [Opitutaceae bacterium TAV2] gi|224799395|gb|EEG17946.1| hypothetical protein ObacDRAFT_5202 [Opitutaceae bacterium TAV2] Length = 772 Score = 41.8 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 18/225 (8%), Positives = 55/225 (24%), Gaps = 23/225 (10%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 +L + + + R + G + K + P Sbjct: 19 WMLWLILGAALALQIFLLVGRNIELPDFARNQLRKAIAAQ-GLDLNFK---TATLDPGGV 74 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123 + + + L +R + L++ + + + GV+ Sbjct: 75 IVLDHVSLADARISEPLLTARSLLIRVDPGWLITRR------------SDLRVEATGVNL 122 Query: 124 WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183 + + ++E + + S + + L+ ++ L L +D Sbjct: 123 LLPAVVSPSGVAEPLVENA-------QFSVRLSGRHIDIHGLSARLGGVTLTASGTLDLD 175 Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 + + + + I A + + + Sbjct: 176 APAEPPSGQLSTAALRRLLTGAIPAARHFVTFTSKFRATGDLVTH 220 >gi|330862063|emb|CBX72229.1| uncharacterized protein ytfN [Yersinia enterocolitica W22703] Length = 1294 Score = 41.8 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 107/344 (31%), Gaps = 47/344 (13%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71 F PL D DFR + Q I G+++ + G + I + + I Sbjct: 252 LFAKPLLPDLPDFRLPLDLQIKEISGQQLRLTGDTDVLITSLLLQASTQDNRITLDTLDI 311 Query: 72 DQKEDG----SFESKIEGLSMRAEFLPLLSGEI-RVFDMYID-----QPHLNFYLSSKGV 121 + G + + + L+ E + + + + L L+ G Sbjct: 312 KSPQGGLSARGEATLADTWPLSITVNSALNIEPLKGEKVKLTVGGGLREQLKVALNLSGP 371 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + T + + + ++ +++ + + L +L ++++ + + + Sbjct: 372 VSAQLDAETALAQAGLPMA-LTLQSKQLRWP-LSGEPQFQLDNLRMRLNGQATDYALSIR 429 Query: 182 IDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDLF 235 D +G GN + ++ N ++ + +++ ++ L Sbjct: 430 SDFKGTDLPPAIFTLDGKGNVEQFNLT-RLRLAALQGNTDLTGVVDWSKAISWNSVLTLS 488 Query: 236 G---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281 G W E G G L L+ + K++R++ ++ G Sbjct: 489 GINTAKQWPEWPAKLDGKIVTRGSIHGGSWQLQVPELTLDGNVKQNRVTARGSLTGNAAG 548 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 I L + D ++ LL+ + + + Sbjct: 549 QWHIPGINLALGR--NKLDVKG----DLNDNWLLDANVDAPQLD 586 >gi|260655505|ref|ZP_05860993.1| hypothetical protein GCWU000246_01466 [Jonquetella anthropi E3_33 E1] gi|260629953|gb|EEX48147.1| hypothetical protein GCWU000246_01466 [Jonquetella anthropi E3_33 E1] Length = 1196 Score = 41.8 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 37/360 (10%), Positives = 97/360 (26%), Gaps = 42/360 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV-GKKIAVKGGIKIHILPF 61 RR L GL + +++ + DW R + G + V + Sbjct: 6 RRSLAGLCTVLIILVAACAVLLFVGDWGA--RLASRYGKQYLAGVPLDVTFD-DLRGNLG 62 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL----SGEIRVFDMYIDQPHLN-FYL 116 + + + GS +++ L L L S ++R + + +L+ F+ Sbjct: 63 SGYDLTGLSLR-TQSGSDVLELKDLRFGLSRLSLSPLGGSLDLRSSGLRLTAGNLSEFFK 121 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 K + L + ++ + +D + + L++ +F + Sbjct: 122 DVDAAFPSEPEKQQEPFHSPLQLGTVLIEDWQ------GTDLPWAVERLSVAPGEKFSQL 175 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID--- 233 + LS + + + + ++ + A + + L + +D Sbjct: 176 EASLSWQGVPIHLSGLVSPDLNDPAGNVTVQALDASITLSGRLSEGFDVTLSGLKLDKLK 235 Query: 234 --------------LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 L G++ + ++ ++G L + FK Sbjct: 236 ELERSLEPLQLGGSLSGSVRLVPTKNGWAISGRLSGQDLAALGSLIG----SFVLPFKYD 291 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339 + + D + + L++ + Sbjct: 292 GSMASVDGASGTVFG--GALAADGTFDA---GDPNFPLFLQVKLTGARLDKAPGVKGTGA 346 >gi|294661402|ref|YP_003573278.1| hypothetical protein Aasi_1949 [Candidatus Amoebophilus asiaticus 5a2] gi|227336553|gb|ACP21150.1| hypothetical protein Aasi_1949 [Candidatus Amoebophilus asiaticus 5a2] Length = 802 Score = 41.8 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 22/234 (9%), Positives = 68/234 (29%), Gaps = 12/234 (5%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHI---LPFPSVFFKDIRIDQKEDGSFESKIEGL 86 + A + I ++I + P S+ + I E+ + + + Sbjct: 13 EQIIPKAFQAAISALKLPIN-AKHVEISLLKDFPRLSLLLHQVTIKDSENTNNILVADQV 71 Query: 87 SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK-----GVSNWFQRKSTMDMIHNVILEK 141 + L G+ + ++++Q L+ + + N + + V L+K Sbjct: 72 GCVFNIIHFLKGKYILEQLFVNQGTLSIPVQKQVARTVRTDNAIEDALQANFTFPVHLKK 131 Query: 142 IHVKGGRIKIIDQESDQVYFL--SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN 199 + + + + S + + + + + + ++ + ++ + + Sbjct: 132 LVLNDVKCIYPGKLSSEQVIIHTQKIFAKFNMQNQHLSMHVKGQAVIQEIAYKPISYAST 191 Query: 200 KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253 + + SL + + L G N +P Sbjct: 192 IPIYISTDIEYNLLEQVYSLH-RSTIKQSNNTLYLQGTWSPNIVKPYIDIQLKA 244 >gi|312888904|ref|ZP_07748466.1| protein of unknown function DUF490 [Mucilaginibacter paludis DSM 18603] gi|311298645|gb|EFQ75752.1| protein of unknown function DUF490 [Mucilaginibacter paludis DSM 18603] Length = 1703 Score = 41.8 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 30/302 (9%), Positives = 92/302 (30%), Gaps = 29/302 (9%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L+ +L +G + +VL+ + + ++ + K+ + ++ + Sbjct: 9 LKTLLWVIGIVILLVLLVLILIQVPAVQNFAKDKAVTFLQSKIKTKVKID---RLSVEFP 65 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK-- 119 + + + + G + L + + LL ++ + ++ + N + Sbjct: 66 KMLVLEGVYFAD-QKGDTLLAGDKLKVNITMMQLLHKKVEINEINLQGITANVVRTPDSA 124 Query: 120 -----------GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 G + + L+K+ + IK D S + Sbjct: 125 FNYTYIMKAFMGEQKNEPKPTDTTSTLKFSLDKVILDKINIKYNDAISGNNVKFLLGHFD 184 Query: 169 ISARFLNIISPLSIDSIKGSVIAEG-TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 + ++ + + G + + A K ++L + L + Sbjct: 185 TRVKNFDLD---KMKFNIPKITLAGFDATIIQTPTGPSVVAAPDTAVKPLNLTLDLGVID 241 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 + N + ++ ++ ++L +K + N ++ + N ++S Sbjct: 242 LS-------KINVNYQGGEMKTKVNLGRLLVEMDKIDLKNQKVAIK-NIQLENTNGQLSL 293 Query: 288 YK 289 K Sbjct: 294 LK 295 >gi|34580600|ref|ZP_00142080.1| hypothetical protein [Rickettsia sibirica 246] gi|28261985|gb|EAA25489.1| unknown [Rickettsia sibirica 246] Length = 876 Score = 41.8 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 115/357 (32%), Gaps = 17/357 (4%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M++++ G+ FS++L F F+++ T +G G IK++ P Sbjct: 1 MIKKIAAGVIICFSLLLFIMFGALSFVNYNS----VTNNFTSHLGIAKENIGKIKMNKFP 56 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + IR + +E + + L+ ++ + I S Sbjct: 57 LSYLVIETIR------EEGKLDLEQIKIHFSLWSLIKFNPKINKIDILDAKFY---SHSN 107 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 V N + + + L+ I++ + II+++ + ++ L+ + Sbjct: 108 VLNIYNHEELIKNFFKYKLQNINLNVTNLSIINKQDYSILNFNNCILKKENALSSNYIFK 167 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPIIIDLFGNLF 239 + + G + D + I N + K +L + I ++ Sbjct: 168 TTSNYIGKISGSINKRDDIVDFSLNIDNNDYGFKLSQIYKDSKLTSGSGEYQIKNLASVM 227 Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299 +N + + + +S + + + + + + ++ Sbjct: 228 YNILPDLNHLFNKFNQHEAVNVKFNISNNEDEIELKDIVIASSFIVGHGFVNIAKNDN-- 285 Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356 K+ + +L + AE + + ++ K D+ D+I S N Sbjct: 286 -ITTNVKLDFPKIDLSSLISPNAEVTFNTSSSNSRFIFANKLLKADVTIDEIILSNN 341 >gi|332160051|ref|YP_004296628.1| hypothetical protein YE105_C0427 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664281|gb|ADZ40925.1| hypothetical protein YE105_C0427 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 1281 Score = 41.8 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 107/344 (31%), Gaps = 47/344 (13%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71 F PL D DFR + Q I G+++ + G + I + + I Sbjct: 239 LFAKPLLPDLPDFRLPLDLQIKEISGQQLRLTGDTDVLITSLLLQASTQDNRITLDTLDI 298 Query: 72 DQKEDG----SFESKIEGLSMRAEFLPLLSGEI-RVFDMYID-----QPHLNFYLSSKGV 121 + G + + + L+ E + + + + L L+ G Sbjct: 299 KSPQGGLSARGEATLADTWPLSITVNSALNIEPLKGEKVKLTVGGGLREQLKVALNLSGP 358 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + T + + + ++ +++ + + L +L ++++ + + + Sbjct: 359 VSAQLDAETALAQAGLPMA-LTLQSKQLRWP-LSGEPQFQLDNLRMRLNGQATDYALSIR 416 Query: 182 IDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDLF 235 D +G GN + ++ N ++ + +++ ++ L Sbjct: 417 SDFKGTDLPPAIFTLDGKGNVEQFNLT-RLRLAALQGNTDLTGVVDWSKAISWNSVLTLS 475 Query: 236 G---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281 G W E G G L L+ + K++R++ ++ G Sbjct: 476 GINTAKQWPEWPAKLDGKIVTRGSIHGGSWQLQVPELTLDGNVKQNRVTARGSLTGNAAG 535 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 I L + D ++ LL+ + + + Sbjct: 536 QWHIPGINLALGR--NKLDVKG----DLNDNWLLDANVDAPQLD 573 >gi|77164765|ref|YP_343290.1| hypothetical protein Noc_1259 [Nitrosococcus oceani ATCC 19707] gi|254434937|ref|ZP_05048445.1| conserved domain protein [Nitrosococcus oceani AFC27] gi|76883079|gb|ABA57760.1| Protein of unknown function DUF748 [Nitrosococcus oceani ATCC 19707] gi|207091270|gb|EDZ68541.1| conserved domain protein [Nitrosococcus oceani AFC27] Length = 996 Score = 41.8 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 42/332 (12%), Positives = 107/332 (32%), Gaps = 41/332 (12%) Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + + + KE + L L I V +Y+ + +L+ +G Sbjct: 283 TFALTQLGLKPKEGNREILTVPKLGFSGGQLRWPEKIIGVKFIYMGGTQVRAWLNKQGAL 342 Query: 123 NW--------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLN 166 NW ++ + ++KI V+ + D+ E +SDL Sbjct: 343 NWQKLFKSKKADRKMTESTANSSSLSWRAAIKKIKVENVSASLQDRTIEPPATLNISDLG 402 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-------L 219 LQ+ ++ S +++ + +G +A +A+ +++S L Sbjct: 403 LQL-IDVTSVPGLASTFNLQFHLNKQGQLLARGHVTALPPSADLEIHLESLSLLPFQPYL 461 Query: 220 KIQLFPLAYPIIIDLFGNLFW----NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 L ++ GN+ + + + G + ++ L+ + Sbjct: 462 NRFLKLKLISGNLEAKGNVAYAQSNDAPNFQFKGDLVLQKFAAEDTLLDERFLGWE-NLK 520 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335 F+ + SR + +I ++ K ++++++ L+ + Sbjct: 521 FERVLVGLFPSRIHIDNIALDAPY---GKVTINENKKIN---------IKEVLSPLAGKK 568 Query: 336 EEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 E + + + + ++N K S + Sbjct: 569 ESQSADPSSTSASKPLPIAINSIRIKKGSANF 600 >gi|52425635|ref|YP_088772.1| hypothetical protein MS1580 [Mannheimia succiniciproducens MBEL55E] gi|52307687|gb|AAU38187.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 453 Score = 41.8 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 72/249 (28%), Gaps = 8/249 (3%) Query: 12 LFSVVLVGAFTVPLFI--DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDI 69 L VLVG F + F+ G K+ + LP P++ + Sbjct: 5 LSVAVLVGIFALLAFLYGQKNKAETQLLTLLQKQ-GIKVN---SLDFSFLPHPTLTANKV 60 Query: 70 RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKS 129 R E E ++ LL G+ ++ +M + + S V Sbjct: 61 RYLVPESSR-LVAFEQVAAEFSGASLLLGDFKISNMRFNDGEIRSEPQSPPVLYSLNFSL 119 Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189 ++ LE + +++D ++Q + +L + + + +G Sbjct: 120 KPAALYLNRLENLLHFFKTKEVLDGGNNQWLYELNLTAKNPSNDNLHFATTFKLLTRGIA 179 Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 + + + D + F I L Q + NE G Sbjct: 180 LKDTNASVDLNELTYSDNKQFTLTADKIYLTTQQSAVEN-YEFSAENLKLNNENLGRVQG 238 Query: 250 VFSVAGDFS 258 + +G Sbjct: 239 EWLASGINP 247 >gi|257062205|ref|YP_003140093.1| hypothetical protein Cyan8802_4475 [Cyanothece sp. PCC 8802] gi|256592371|gb|ACV03258.1| WD-40 repeat protein [Cyanothece sp. PCC 8802] Length = 1161 Score = 41.4 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 52/387 (13%), Positives = 119/387 (30%), Gaps = 36/387 (9%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M+R IGLG L ++ I +T R ++Q G ++ G Sbjct: 454 MIR---IGLGILVVSLVGA------LISFTQARSAIQKQQEAKKGSQLEQMGDSAWRQFE 504 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 F + D I E ++ L + +L + + + L+ Sbjct: 505 FEQL---DGLISAMEG------VQKLKTIVKDQRILKDYPATRPIIVLEQILDRIHEKNK 555 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS----DLNLQISARFLNI 176 ++ +++ N L G I++ D++ Q ++ ++ + + Sbjct: 556 LTGHEDAVNSVTFSPNGQLIATASSDGTIRLWDRQGRQKTVITGHKGNIYRVTFSPDGQL 615 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 I+ S D+ +G K + + + + L A + Sbjct: 616 IASASQDNTAKVWNLQGQELMTLKGHNSSVYSVSFSPDSKHLLTTSRDDTARIWDLQGHQ 675 Query: 237 NLFWNEKQPIYS-GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 + GVFS G + + + + GN + + + S P Sbjct: 676 LAILKGHEKSIDHGVFSPDGQRIATASRDGTVRIWDNQGNL-LKILKDSVDSFYSVSFSP 734 Query: 296 N----SSTDEDNKTKVSQDEENLLNFSENGAES-------MHDLNETDFFEEEEKKNKND 344 + +S+ +D ++ D + + G + HD N + + Sbjct: 735 DGQRLASSAKDGTVRI-WDNQGKSILTLKGHQELVKNVTYSHDGNWIATASSDGTARVWN 793 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQE 371 ++ + + ++ D + +QE Sbjct: 794 TQGQEVMVFRGHQDPVYDVAISSNSQE 820 >gi|218249119|ref|YP_002374490.1| WD-40 repeat-containing protein [Cyanothece sp. PCC 8801] gi|218169597|gb|ACK68334.1| WD-40 repeat protein [Cyanothece sp. PCC 8801] Length = 1161 Score = 41.4 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 52/387 (13%), Positives = 119/387 (30%), Gaps = 36/387 (9%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M+R IGLG L ++ I +T R ++Q G ++ G Sbjct: 454 MIR---IGLGILVVSLVGA------LISFTQARSAIQKQQEAKKGSQLEQMGDSAWRQFE 504 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 F + D I E ++ L + +L + + + L+ Sbjct: 505 FEQL---DGLISAMEG------VQKLKTIVKDQRILKDYPATRPIIVLEQILDRIHEKNK 555 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS----DLNLQISARFLNI 176 ++ +++ N L G I++ D++ Q ++ ++ + + Sbjct: 556 LTGHEDAVNSVTFSPNGQLIATASSDGTIRLWDRQGRQKTVITGHKGNIYRVTFSPDGQL 615 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 I+ S D+ +G K + + + + L A + Sbjct: 616 IASASQDNTAKVWNLQGQELMTLKGHNSSVYSVSFSPDSKHLLTTSRDDTARIWDLQGHQ 675 Query: 237 NLFWNEKQPIYS-GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295 + GVFS G + + + + GN + + + S P Sbjct: 676 LAILKGHEKSIDHGVFSPDGQRIATASRDGTVRIWDNQGNL-LKILKDSVDSFYSVSFSP 734 Query: 296 N----SSTDEDNKTKVSQDEENLLNFSENGAES-------MHDLNETDFFEEEEKKNKND 344 + +S+ +D ++ D + + G + HD N + + Sbjct: 735 DGQRLASSAKDGTVRI-WDNQGKSILTLKGHQELVKNVTYSHDGNWIATASSDGTARVWN 793 Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQE 371 ++ + + ++ D + +QE Sbjct: 794 TQGQEVMVFRGHQDPVYDVAISSNSQE 820 >gi|85373156|ref|YP_457218.1| hypothetical protein ELI_01645 [Erythrobacter litoralis HTCC2594] gi|84786239|gb|ABC62421.1| hypothetical protein ELI_01645 [Erythrobacter litoralis HTCC2594] Length = 1400 Score = 41.4 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 79/297 (26%), Gaps = 32/297 (10%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93 + Q G + V G I+ + D+ + + +I M L Sbjct: 59 DQIA-QVAPASGLRFEV-GRIEGDLFRD--ARLYDVVLYDPKGA--FLRIPEAEMDWRPL 112 Query: 94 PLLSGEIRVFDMYIDQPHL-NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII 152 + + + + L G + + I + +E + + G II Sbjct: 113 SWFTSGLDIRTAIARRATLERLPELLPGDPDAPTLPNFDIRIDRLAIENLTIAPG---II 169 Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212 D+ S +V + +++ + L + + + D + P Sbjct: 170 DERSHRVDLTASADIREGLADVEASGRL---GREDRFVLDLEAEPDGNVFDLDLDYVAPR 226 Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS--AKKS 270 SL + G W + + G +V D S + L+ A Sbjct: 227 DGVIASL----VGAEAGYEARVRGGGTWRD----WKGFLTVRRDDSMIGGFRLTNKAGLY 278 Query: 271 RLSGNFKISD------GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321 L G + R L + D + LN +G Sbjct: 279 GLVGQIDAAPLSEGLIEAAAAPRLSLAFFTTLEESVLDGALRAR---SRALNLRADG 332 >gi|313158736|gb|EFR58123.1| hypothetical protein HMPREF9720_1927 [Alistipes sp. HGB5] Length = 1600 Score = 41.4 bits (95), Expect = 0.24, Method: Composition-based stats. Identities = 36/320 (11%), Positives = 91/320 (28%), Gaps = 39/320 (12%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFI----DWTDFREDFERQATLIVGKKIAVKGGIKI 56 ML+++L V+L+ VP + R A+ +G ++V+ ++ Sbjct: 1 MLKKILKYTFRTLLVILLVLILVPALLYIPAVQDFVRSKAVGYASRTLGMDLSVE---RL 57 Query: 57 HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + + + + + G LS+ PLL E+ V + + + ++ Sbjct: 58 RLSFPLRLSVDNTLLT--DKGDTLLSCGHLSLEVAVWPLLRKEVAVRSLELAKLAAHYGD 115 Query: 117 SSKGVSNWFQRKS-------TMDMIHNVILEKIHVKGGRIKI----------IDQESDQV 159 S+ G+ V + +I + G + + D + Sbjct: 116 STAGMDLKVAAGQFAVNDCRVGLPAKTVGISRIALTDGDVFLNTAESAPAEKADSAAALP 175 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG---NFDNKRSAFKITANFPAKNKA 216 + + L ++ + + ++ + + +G + + + Sbjct: 176 WQIDVGKLTVANLVFGMRTAPAVTDLSVRL-PDGEVDSCRVLLDSRQVSVKSILLNRGGY 234 Query: 217 ISLKIQLF-PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 L P G +K S + L Sbjct: 235 AYLTAPADAGEKAPDKTATQGKAAHPDKTAAAD------NASSPHDAAADDGEAPAL--P 286 Query: 276 FKISDGNVRISRYKLQSILP 295 + + G+V ++ L+ Sbjct: 287 WTVRVGSVTLNDNSLEYGTL 306 >gi|90414680|ref|ZP_01222651.1| hypothetical protein P3TCK_23558 [Photobacterium profundum 3TCK] gi|90324222|gb|EAS40797.1| hypothetical protein P3TCK_23558 [Photobacterium profundum 3TCK] Length = 659 Score = 41.4 bits (95), Expect = 0.24, Method: Composition-based stats. Identities = 44/426 (10%), Positives = 111/426 (26%), Gaps = 54/426 (12%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-P 60 +R V G L ++L+ + + + I HI P Sbjct: 1 MRVVGKIFGTLIILMLLSITIILTLLHTQYATRLVINTIDATTNYHLK-AANISYHISDP 59 Query: 61 F--------------PSVFFKDI-------RIDQKEDGSFESKIEGLSMR-----AEFLP 94 + P + +I ++ I+ +++ A Sbjct: 60 WHIQLEQPQIMYQRQPLLSANNIQLWLTPTKLLNTGWSFDSILIDTITLNQPLNLATLPD 119 Query: 95 LLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKG 146 L + + ++ + P ++ + + NW R + N+ + +K Sbjct: 120 LHVQRLALNNLTLHTPEISIEQARLQIDNWQSRSQSWGIFSGDFQLSTPNMQWQGTTLKD 179 Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKI 206 + I DQ + + L+ + + + + + +++ + + Sbjct: 180 --VLIDGDYQDQNWKIYGLSFEWQHATFSGQAEYKQSATQTNLLTLHQLTVTGLQLQDQA 237 Query: 207 TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS 266 +K + + L N+ + SV + + Sbjct: 238 QLTLFRSYID-QVKASALTIDIKRLDVLESNIEMPNYTLN-NINLSVQNWQWPATHWQQH 295 Query: 267 AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN---------- 316 L+ + I N + S + + + N Sbjct: 296 EALVSLNAS-SIQWLNTVFEEPIVNSTFSPQQITVNGLSTKVLEGYVQFNGALTPDVLAL 354 Query: 317 --FSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374 + NG + + N + + + D+ Y+ N N + Sbjct: 355 NQVTVNGIKWVLPNNWPTHLRTLNSLYSDISVTQLDVGYAQLTDTNPANPFQIAGL-NIN 413 Query: 375 GDKMIL 380 G+ +IL Sbjct: 414 GEDLIL 419 >gi|238797579|ref|ZP_04641076.1| hypothetical protein ymoll0001_5490 [Yersinia mollaretii ATCC 43969] gi|238718576|gb|EEQ10395.1| hypothetical protein ymoll0001_5490 [Yersinia mollaretii ATCC 43969] Length = 1259 Score = 41.4 bits (95), Expect = 0.25, Method: Composition-based stats. Identities = 43/345 (12%), Positives = 111/345 (32%), Gaps = 47/345 (13%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL + DFR + Q I G+++ + G ++ I + + Sbjct: 216 ALFAKPLLPELPDFRLPLDLQIKSISGQQLRLTGDTEVVINSLLLQASTQDQRIALDKLE 275 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVF-------DMYIDQP---HLNFYLSSKG 120 I + G L+ + +++ + + + I L L+ G Sbjct: 276 IKSPQGGLSAQGEATLADKWPLSLVVNSSLNIEPLKGEKVKLTIGGALREQLTVALNLSG 335 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + T + + + ++ +++ + Y + +L ++++ + + + Sbjct: 336 PVSVQLDAETSLGQAGLPVA-LTLQSKQLRWP-LAGEPEYQIDNLRMRLNGQATDYALSI 393 Query: 181 SIDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDL 234 D + +G GN + ++ N +S + +++ ++ L Sbjct: 394 RSDLKGIDLPPAVLTLDGKGNVEQFNLT-RLRLAALQGNTDLSGVVDWSKAISWNSVLTL 452 Query: 235 FG---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD--- 280 G W E +G G L L+ + K++R++ ++ Sbjct: 453 SGINTAKQWPEWPAKLNGKIVTRGSVYGGSWQLQVPELTLDGNVKQNRVTARGSLTGNAA 512 Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 G I L ++ D ++ LL+ + + + Sbjct: 513 GQWHIPGINLALGR--NTLDVKG----DLTDQWLLDANVDAPQLD 551 >gi|227824645|ref|ZP_03989477.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226905144|gb|EEH91062.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 443 Score = 41.4 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 56/390 (14%), Positives = 110/390 (28%), Gaps = 53/390 (13%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL--- 59 R+V LG +F+V++ G F V + ++ ++G I + L Sbjct: 12 RKVKYTLGIVFAVIV-GLFAVAYALSLQA--AAIFNMIAA---RQHFLEGTITVGRLTAT 65 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMY---IDQPHLNFYL 116 P V F+D+ E G+ + + L L+ + ++ + Sbjct: 66 PLGHVHFEDLVWTLDESGTK-VTVPDGHFHVKPLDLIMRRPSTSTITNVELNGASIELSF 124 Query: 117 SSK----GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII-------DQESDQVYFLSDL 165 +K G +K + VK + +I ++V+ D+ Sbjct: 125 DNKMHIRGFHMVEPKKEKKGKGKKKPNFDVKVKNLDVDLILNHCRVTAYYKERVHTFKDV 184 Query: 166 NLQISARFLNI------ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 N I + L G V +G+ + S + + N SL Sbjct: 185 NAAIHYDSKDRIDIDFSTGELGGTLEGGGVDIQGSVDLKPAVSTYDLNLGIRELN-PSSL 243 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 L + + +PI G + L + G+FK Sbjct: 244 GTGLNIHE---TVTASAAVTGKLPEPIIIGQLYMKNLNLPGLKFT------NVRGDFKYK 294 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339 DG I + + + + D + + G + E+ Sbjct: 295 DG--YIGAQNVTADVFGGTCDASGGFNIDTK---AYDVYVKGHDLH--------SEDAAG 341 Query: 340 KNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369 L + D+ S N ++ Sbjct: 342 VPFFRTLVQLDLTMSCNGDNRSTVTYGTFT 371 >gi|325982417|ref|YP_004294819.1| hypothetical protein NAL212_1791 [Nitrosomonas sp. AL212] gi|325531936|gb|ADZ26657.1| protein of unknown function DUF490 [Nitrosomonas sp. AL212] Length = 1278 Score = 41.0 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 32/320 (10%), Positives = 85/320 (26%), Gaps = 37/320 (11%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR G + +++ F++ + +V + + F Sbjct: 16 RRFRWLAGLVSLMLICILLAGYWFVNS-----------QSGLQWTFSVVHRLSSGAIHFA 64 Query: 63 SV--FFKDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 V D+RI+ FE + + + + L +I + + + ++ S+ Sbjct: 65 GVQGTLHDLRIENIHFSGDEFELQGQNIRIVWNPGKLFYKQIAIDQLIAETLRIHHLASA 124 Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKG---------------GRIKIIDQESDQVYFLS 163 + +S + + + + + + + + + L Sbjct: 125 EDTPRGTLPESLNLPLA-LSIHALTIDSMYLTTVENKNAEPIITNLALALESDGHTHQLK 183 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 LN + + + S + S +KIQ Sbjct: 184 SLNFYTPWGSVTASAEFNGSS---PFDLSAQIDLSGVDSWGDAQMVI--TGSLERMKIQA 238 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 + + DL L P+ ++ LS +F ++ Sbjct: 239 SMVQSTSVGDLQLQLHPFADNPVAQLDANIEQLNPASFIAAAPQASLSLSAHFAQNNSGQ 298 Query: 284 RISRYKLQSILPNSSTDEDN 303 + ++++ + D Sbjct: 299 LEGKVRIKNHEA-APYDAGG 317 >gi|238651044|ref|YP_002916901.1| hypothetical protein RPR_06910 [Rickettsia peacockii str. Rustic] gi|238625142|gb|ACR47848.1| hypothetical protein RPR_06910 [Rickettsia peacockii str. Rustic] Length = 876 Score = 41.0 bits (94), Expect = 0.30, Method: Composition-based stats. Identities = 56/382 (14%), Positives = 137/382 (35%), Gaps = 33/382 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M++++ G+ FS++L F F+++ T +G G IK+H P Sbjct: 1 MIKKIAAGVIICFSLLLFIMFGALSFVNYNS----VTNNFTSHLGIAKENIGKIKMHKFP 56 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + IR + +E + + L+ ++ + I S Sbjct: 57 LSYLVIETIR------EEGKLDLEQIKIHFALWSLIKFNPKINKIDILDAKFY---SHSN 107 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 V N + + + L+ I++ + II+++ + ++ L+ + Sbjct: 108 VLNIYNHEELIKNFFKYKLQNINLNVTNLSIINKQDYSILNFNNCILKKENALSSNYIFK 167 Query: 181 SIDSIKGSVIA---------EGTGNFDNKRSAFKITA---NFPAKNKAISLKIQ-LFPLA 227 + + G + + + N DN FK++ + + + +I+ L + Sbjct: 168 TTSNYIGKISGSINKRDDIVDFSLNIDNNDYGFKLSQIYKDSKLTSGSGEYQIKNLASVM 227 Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDF--SKLLNLELSAKKSRLSGNFKISDGNVRI 285 Y I+ DL + + F+++ + +L ++ +++ G I+ + Sbjct: 228 YNILPDLNHFFNKFNQHEAVNVKFNISNNEDAIELKDIVIASSFIIGHGFVNIAKNDNIT 287 Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEE---NLLNFSENGAESMHDLNE--TDFFEEEEKK 340 + KL + S+ +V+ + F+ ++ +NE EE +K Sbjct: 288 TNVKLDFPKIDLSSLISPNAEVTFNTSSSNIRFIFANKLLKADVAINEIILSNNEELKKI 347 Query: 341 NKNDDLKKDDIQYSVNKKEEKD 362 + +L K ++ + K Sbjct: 348 VFSSNLSKGTLKINEFSGNIKS 369 >gi|157370839|ref|YP_001478828.1| hypothetical protein Spro_2599 [Serratia proteamaculans 568] gi|157322603|gb|ABV41700.1| conserved hypothetical protein [Serratia proteamaculans 568] Length = 870 Score = 41.0 bits (94), Expect = 0.33, Method: Composition-based stats. Identities = 33/289 (11%), Positives = 80/289 (27%), Gaps = 27/289 (9%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV--GKKIAVKGGIKIHI 58 M +R+ + +G + SV+++ W R + + G ++ ++G ++ H Sbjct: 1 MTKRLKVFIGIVVSVLILLVAL------WQTLPRWLPRVLSHWLPQGSQLVLQGKLQWH- 53 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 ++ R + + + ++ +++D Sbjct: 54 --QGALQLDGARFL--AQDCLLASAGPTRLAYQQGRW---QLIGDKLHVD--TACLSKLP 104 Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 G +N +L+ I +K + + LQI A Sbjct: 105 AGDTNSAPLALDQLQKQLPLLD-ITIKDLSVL--------PWQFYAGKLQIHATAEGQSL 155 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 ++ + + + + + I L + P L G L Sbjct: 156 QYQGPNVSVDALLDQHQQLTLNSLTLTAPNSPQPLHLTGKISIPLDLDSMPTQGALQGEL 215 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287 + + E A K + ++I+ V I + Sbjct: 216 QTAYLEKPLLLDMRWQQQQGVMTLTEKGADKPLATLPWEINPQQVSIKQ 264 >gi|318607389|emb|CBY28887.1| uncharacterized protein YtfN [Yersinia enterocolitica subsp. palearctica Y11] Length = 1281 Score = 41.0 bits (94), Expect = 0.34, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 106/344 (30%), Gaps = 47/344 (13%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71 F PL D DFR + Q I G+++ + G + I + + I Sbjct: 239 LFAKPLLPDLPDFRLPLDLQIKEISGQQLRLTGDTDVLITSLLLQASTQDNRITLDTLDI 298 Query: 72 DQKEDG----SFESKIEGLSMRAEFLPLLSGEI-RVFDMYID-----QPHLNFYLSSKGV 121 + G + + + L+ E + + + + L L+ G Sbjct: 299 KSPQGGLSARGEATLADTWPLSITVNSALNIEPLKGEKVKLTVGGGLREQLKVALNLSGP 358 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + T + + + ++ +++ + + L +L ++++ + + + Sbjct: 359 VSAQLDAETALAQAGLPMA-LTLQSKQLRWP-LSGEPQFQLDNLRMRLNGQATDYALSIR 416 Query: 182 IDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDLF 235 D G GN + ++ N ++ + +++ ++ L Sbjct: 417 SDFKGTDLPPAIFTLNGKGNVEQFNLT-RLRLAALQGNTDLTGVVDWSKAISWNSVLTLS 475 Query: 236 G---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281 G W E G G L L+ + K++R++ ++ G Sbjct: 476 GINTAKQWPEWPAKLDGKIVTRGSIHGGSWQLQVPELTLDGNVKQNRVTARGSLTGNAAG 535 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 I L + D ++ LL+ + + + Sbjct: 536 QWHIPGINLALGR--NKLDVKG----DLNDNWLLDANVDAPQLD 573 >gi|317493599|ref|ZP_07952020.1| hypothetical protein HMPREF0864_02785 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918542|gb|EFV39880.1| hypothetical protein HMPREF0864_02785 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 1309 Score = 40.6 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 53/400 (13%), Positives = 103/400 (25%), Gaps = 39/400 (9%) Query: 16 VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFK 67 VL F PL D + R + I G ++ V G I + ++ Sbjct: 262 VLAELFAKPLLPDLPELRLPLDLTVKRISGDQLRVTGDSDIVVNTLLVRAVTKDSALRLH 321 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH----------LNFYLS 117 + + + LS + L+ ++ V + ++ L + Sbjct: 322 TLEVRSPQGNVSMHGQATLSDQWPMDFRLNADLNVDPVKGEKLKLGIKGNLRDVLTLDAN 381 Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 G T + L G + S+ + L S + + Sbjct: 382 LSGPLKATLAAETQLAKAGLPLALTLESPGVQWPLTGASEYQAKNIRVRLNGSGKAYALS 441 Query: 178 SPLSIDSIKGS---VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 + + + +G G A +L +++ + L Sbjct: 442 MRTDVSGNEIPAAKITLDGKGTDQQFNLNRLRVAALQGNTDLSALVDWSKAISWKSKLTL 501 Query: 235 FG---NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 G W E +G G N +L +L+GN K + +VR + Q Sbjct: 502 DGINTAKQWPEWPAKLNGKIETQG-SLYGGNWQLRVPVLQLAGNVKQNQVDVRGNLTGNQ 560 Query: 292 SILPNSSTDEDN----KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK----- 342 + K ++ + + D N + K Sbjct: 561 AGQWKIPEMHIGLGRNKIDITGELSDKWALDAVIDAPRLDGNLPGLAGTAKGTLKLRGNL 620 Query: 343 -----NDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377 DL +Q+ D + E G+ Sbjct: 621 KAPQVLADLTASGLQWQTLTINRVKLDGDVRSAEQIEGNL 660 >gi|291619064|ref|YP_003521806.1| YtfN [Pantoea ananatis LMG 20103] gi|291154094|gb|ADD78678.1| YtfN [Pantoea ananatis LMG 20103] Length = 1255 Score = 40.6 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 112/361 (31%), Gaps = 52/361 (14%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 ++VLIG ++ G + G + +KG +P Sbjct: 5 KKVLIGFLIFLVLLFAGLAFLIGTTP----------------GLHLVLKGAS--RWVPGL 46 Query: 63 SVF-----FKDIRIDQKEDGSFESKI--EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 S+ ++++ + + + + + LL + V D+ + ++ Sbjct: 47 SINKVDGGWRNLTLSGLRYEMPGVSVNAGNIHLAVDLNCLLHSSVCVNDLTLKD--ISVV 104 Query: 116 LSSKGVSNWFQRKSTM------DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 + SK ++ + + L + + +K+ D +S ++ Sbjct: 105 VDSKKMTPSTAPPEEESGKTNLSTPYPITLRHVGLHNINVKVDDTA------ISLVDFTT 158 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 ++ + L+ I+ +IA K + P ++ + A P Sbjct: 159 GLQWQDRALTLNPTHIQSLLIALPKAAQVAKEQVVQPKIQQPKPDEKPLGETLQAMFAKP 218 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 ++ +L P + + L ++ ++ + + Sbjct: 219 LLPEL----------PDFQLPLDIDVKDIVGEQLRITGDTDITVSRLQVKAKTLD-RHMQ 267 Query: 290 LQSILPNSST-DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 LQ++ +S+ + + + + ++ + NG + D + + K D+LK Sbjct: 268 LQTLAVDSNLGKLNGVGQATLADNWPVDLTLNG-DVNVDPVKGEKLNLTVKGAMRDELKL 326 Query: 349 D 349 Sbjct: 327 A 327 >gi|187925488|ref|YP_001897130.1| hypothetical protein Bphyt_3516 [Burkholderia phytofirmans PsJN] gi|187716682|gb|ACD17906.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN] Length = 373 Score = 40.6 bits (93), Expect = 0.38, Method: Composition-based stats. Identities = 16/193 (8%), Positives = 54/193 (27%), Gaps = 30/193 (15%) Query: 35 DFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEF 92 + + + +G + I++ + SV ++ + + + +++ + Sbjct: 34 EVKERVIAALG-PLGSAENIEVGL---TSVRLTNVLLKAPPGWPAGDPLRADEITLTPDI 89 Query: 93 LPLLSGEIRVFDMYIDQPHLNFYLSSKG-------------VSNWFQRKSTMDMIHNVIL 139 L++ + V + + + + G S+ + + Sbjct: 90 RDLIARRMHVRSVVVRGFDIAVLRTKDGAIRLMPNLRETVNQSDAEASGPAASIPREKQI 149 Query: 140 EKIHVKGGRIKIIDQESDQ---VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196 + I + G D +S+ N + L + ++ TG+ Sbjct: 150 DHISFEQGNFHFYDMTVGPPAFKVTVSNANATVDN--------LRLPALTDPTNVNVTGS 201 Query: 197 FDNKRSAFKITAN 209 ++ Sbjct: 202 IKGPTHTGTVSFG 214 >gi|325919829|ref|ZP_08181821.1| hypothetical protein XGA_0761 [Xanthomonas gardneri ATCC 19865] gi|325549695|gb|EGD20557.1| hypothetical protein XGA_0761 [Xanthomonas gardneri ATCC 19865] Length = 1262 Score = 40.6 bits (93), Expect = 0.38, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 77/305 (25%), Gaps = 45/305 (14%) Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK--GVSNWFQRKSTMDMIHNVI 138 E + + + PLL ++++ + + LN S + + +W + +++ + Sbjct: 72 FTAERVYLEPDLRPLLGRKLQLDAVQVSNATLNLGKSEEPFTLPSWPESLPQINVPLAIQ 131 Query: 139 LEKIHVKGGRIK-----------------------------IIDQESDQVYFLSDLNLQI 169 +KI V RI I D + Sbjct: 132 ADKIAVDNLRITQLQQPMIVLHKVQGGLEVATGELRTRNLVIDTDMGDFRLHGDYIPNDD 191 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 L + L + D + I PA +A + + Sbjct: 192 YRADLTATAVLPAARGRTPASLGLVARGDLDKMEVAIAGRAPAPLQASLVFTGRDAPTWA 251 Query: 230 IIIDLFG----------NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 N + + +G +L+ S K+ LS + S Sbjct: 252 FKAVTDALDTSLLMPASNGQYAAPATPIALNLQASGKG-GAADLQGSVKQGELSATLQPS 310 Query: 280 DGNVRISRYKLQSILPNSS---TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEE 336 ++ ++ ++ ++ T + F+ N + + Sbjct: 311 HISLLDQVITVEPLVIDTFEGRTQLRGTADFRDTQNPSFRFAVNASGLRFTPTPDPATPD 370 Query: 337 EEKKN 341 Sbjct: 371 APAVP 375 >gi|88797898|ref|ZP_01113486.1| hypothetical protein MED297_12120 [Reinekea sp. MED297] gi|88779575|gb|EAR10762.1| hypothetical protein MED297_12120 [Reinekea sp. MED297] Length = 438 Score = 40.6 bits (93), Expect = 0.39, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 87/314 (27%), Gaps = 37/314 (11%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV--GKKIAVKGGIKIHI 58 + R + I + L + L+ A +R D + + G + +++ Sbjct: 6 IRRSLFIIISVLIVLALIAAV--------NLWRFDASEWLSKTLPVGAPALQQSDVEVQA 57 Query: 59 LPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 L ++ + + + LS+R L +L G+ R+ + +D P L Sbjct: 58 LGT------ELTFVEPDIQWSEARFSADLLSLRFNLLSVLLGQPRLQWIGLDAPVLEMAT 111 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 + V + + + + DL L + + Sbjct: 112 NQIDVQQLHWPIDVGFQELTLTNGLLLLSDSEVT-------------DLELSLLKNGVFG 158 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 + + + + T + + L L L + L G Sbjct: 159 EYAVQASAALYTPDWQATL---GLSTLLGRDGDENLVLGKTQLDTNLVMLNWTGR--LAG 213 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296 L P S S + L +++G + R+ L ++ Sbjct: 214 KLKSVRITPDNDLQLSYLSWSSNWRTSKELMPYI-LDWAGGLTEGTLSDGRWTLDTLDSA 272 Query: 297 SSTDEDNKTKVSQD 310 + + N T + Sbjct: 273 LAYRDSNDTAHTLA 286 >gi|15892397|ref|NP_360111.1| hypothetical protein RC0474 [Rickettsia conorii str. Malish 7] gi|15619548|gb|AAL03012.1| unknown [Rickettsia conorii str. Malish 7] Length = 891 Score = 40.6 bits (93), Expect = 0.39, Method: Composition-based stats. Identities = 40/333 (12%), Positives = 110/333 (33%), Gaps = 41/333 (12%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M++++ G+ FS++L F F+++ T +G G IK++ P Sbjct: 16 MIKKIAAGVIICFSLLLFIMFGALSFVNYNS----VTNNFTSHLGIAKENIGKIKMNKFP 71 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + IR + +E + + L+ ++ + I S Sbjct: 72 LSYLVIETIR------EEGKLDLEQIKIHFSLWSLIKFNPKINKIDILDAKFY---SHSN 122 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 V N + + + L+ I++ + II+++ + ++ L+ Sbjct: 123 VLNIYNHEELIKNFFKYKLQNINLNVTNLSIINKQDYSILNFNNCILK------------ 170 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID---LFGN 237 +++ + I + T N+ KI+ + ++ + + + Y + Sbjct: 171 KENALSSNYIFKTTSNYIG-----KISGSINKRDDIVDFSLNIDNNDYGFKLSQIYKDSK 225 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSA----KKSRLSGNFKISDGNVRISRYKLQSI 293 L + + SV + LN + + + N ++ + + + Sbjct: 226 LTSGSGEYQIKNLASVMYNILPDLNHLFNKFNQHEAVNVKFNISNNEDAIELKDIVI--- 282 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 +S +++++ N + + Sbjct: 283 -ASSFIIGHGFVNIAKNDNITTNVKLDFPKIDL 314 >gi|229586615|ref|YP_002845116.1| hypothetical protein RAF_ORF0441 [Rickettsia africae ESF-5] gi|228021665|gb|ACP53373.1| Unknown [Rickettsia africae ESF-5] Length = 876 Score = 40.6 bits (93), Expect = 0.39, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 109/335 (32%), Gaps = 45/335 (13%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M++++ G+ FS++L F F+++ T +G G IK++ P Sbjct: 1 MIKKIAAGVIICFSLLLFIMFGALSFVNYNS----VTNNFTSHLGIAKENIGKIKMNKFP 56 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + IR + +E + + L+ ++ + I S Sbjct: 57 LSYLVIETIR------EEGKLDLEQIKIHFSLWSLIKFNPKINKIDILDAKFY---SHSN 107 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 V N + + + L+ I++ + II+++ + ++ L+ Sbjct: 108 VLNIYNHEELIKNFFKYKLQNINLNVTNLSIINKQDYSILNFNNCILK------------ 155 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 +++ + I + T N+ KI+ + ++ + + + Y + Sbjct: 156 KENALSSNYIFKTTSNYIG-----KISGSINKRDDIVDFSLNIDNNDYGFKLS-----QI 205 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI--------SRYKLQS 292 + + SG + + + L F V + +L+ Sbjct: 206 YKDSKLTSGSGEYQIKNLASVMYNILPDLNHLFNKFN-QHEAVNVKFNISNNEDEIELKD 264 Query: 293 ILPNSSTDE-DNKTKVSQDEENLLNFSENGAESMH 326 I+ SS +++++ N + + Sbjct: 265 IVIASSFIIGHGFVNIAKNDNITTNVKLDFPKIDL 299 >gi|332529871|ref|ZP_08405823.1| AsmA family protein [Hylemonella gracilis ATCC 19624] gi|332040665|gb|EGI77039.1| AsmA family protein [Hylemonella gracilis ATCC 19624] Length = 703 Score = 40.6 bits (93), Expect = 0.40, Method: Composition-based stats. Identities = 36/297 (12%), Positives = 78/297 (26%), Gaps = 29/297 (9%) Query: 18 VGAFTVPLFIDWTDFREDFERQATLIVGKK-------IAVKGGIKIHILPFPSVFFKDIR 70 G + D Q G + + V + + P S+ Sbjct: 43 AGLAWIAARFDPQTQARQLAEQIRGQTGYQLTAAVPKLTVAPRLGLAWGP-LSLQSAGEE 101 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 + + +G+ + + L LL GE++V ID HL + Sbjct: 102 LSAGAPARSVATAQGMHLSLDLLDLLRGEVQVRRARIDGLHL------------WPAPDR 149 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 ++ + L+ + + + S + + + +V Sbjct: 150 HYVVPTLELKLAQLAATGLASAVGPNGLATPSSPSAPSSPSSPVTASLTRAATLPTQAVQ 209 Query: 191 AEGTGNFDNKRSA-----FKITAN-FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 A GT D + + ++ A A ++ LK+Q G + Sbjct: 210 ATGTAVADPRLAPPLTHALELHATVLDAAGQSRPLKLQGQVGLETPEASAHGAASRQPRA 269 Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 ++ L A F ++ G + + Y+ + Sbjct: 270 FHVLLQGALDQTTFALEASRTDASAVL---RFDLNLGTLDLDHYQAHPLAQPLPLTV 323 >gi|225164263|ref|ZP_03726535.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] gi|224801134|gb|EEG19458.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] Length = 266 Score = 40.6 bits (93), Expect = 0.42, Method: Composition-based stats. Identities = 25/220 (11%), Positives = 65/220 (29%), Gaps = 32/220 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 L++++I L + + V ++ I G ++ + + PF Sbjct: 8 LKKLIIAFC-LLVALGIVGLVVLSMYLGPILKKGVNTIGPKITGTRVELA---SASVSPF 63 Query: 62 P-SVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL-- 116 K + + + + ++ + + LL I V ++ I +PH F Sbjct: 64 AGGATLKGLFVGNPSGWKSDKAFYLGEIKVKLKSMSLLGDAIDVEEISIKEPHFVFEKGL 123 Query: 117 ------------------SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 S + S +I+ K + ++ + Sbjct: 124 TSSNINDLLKQIDANMGGGKTAQSKPNEPASDKTSAQKIIVRKFQLSDAQVTLGLGAMAS 183 Query: 159 V-----YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193 ++D+ + + ++ + + + V A G Sbjct: 184 TIPMPAITMTDIGVAEGGVTADQLATVILKRVLADVTAAG 223 >gi|302035602|ref|YP_003795924.1| putative heme utilization protein [Candidatus Nitrospira defluvii] gi|300603666|emb|CBK39997.1| putative large exoprotein involved in heme utilization or adhesion [Candidatus Nitrospira defluvii] Length = 1149 Score = 40.6 bits (93), Expect = 0.42, Method: Composition-based stats. Identities = 32/285 (11%), Positives = 71/285 (24%), Gaps = 5/285 (1%) Query: 66 FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125 I + Q + + + F I D H S G + Sbjct: 630 ASGITLAQPLNDVATLAAQTAAGDLTFTNNNGFTIGTVTATADGFHPALTGVSAGGAITL 689 Query: 126 QRKSTMDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 Q + H + + + G G + D ++ F ++ + + + L + Sbjct: 690 QGGGAVAQTHRIHGSSLRLLGSGPFTLTDHTNEVTAFSANTTDHVQYTDASDVI-LGGSN 748 Query: 185 IKGSVIAEGTGNF-DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243 I G G A + I+L + + + Sbjct: 749 IPGHFDLTTNGAITQGGALTVTGRTTLAAGSGDITLTQAGNNFSRVDVTSANHVALRDSD 808 Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303 + + S + G ++ G+ I+ ++ +S Sbjct: 809 ALVLGASTVNGTLNVTTNGALTQSGASTVRGAATLATGSYDITLI--EAGNDFTSISITG 866 Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348 VS + N L + + D + + +L Sbjct: 867 GNHVSLRDTNALRLATSTTSGNLDADAGSVTIGGALTSSGGNLTL 911 >gi|297566659|ref|YP_003685631.1| hypothetical protein Mesil_2256 [Meiothermus silvanus DSM 9946] gi|296851108|gb|ADH64123.1| protein of unknown function DUF490 [Meiothermus silvanus DSM 9946] Length = 2780 Score = 40.6 bits (93), Expect = 0.43, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 73/262 (27%), Gaps = 18/262 (6%) Query: 48 IAVKGGIKIHILPFPSVFF-KDIRIDQKE-DGSFESKIEGLSMRAEFLPLLSGEIRVFDM 105 + V+G + + P +V D+ E G+ + LS R E Sbjct: 617 VRVQGPLAFRLAPGLAVSLRSDLTYRNGEFSGTASAVTPYLSARLEGRGQGLWATTQGYA 676 Query: 106 YIDQPHLNFYLSSKGVSNWFQRKSTMDM--IHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 + P G + +V + GR+ +V + Sbjct: 677 ELSGPVFP-DTQLSGQLTLPSLGAVQISKLPMHVTRNGATLGEGRVDFKPGFPFRVLLPA 735 Query: 164 DLNLQISARFLNIISPLSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 + + + +++ +G+GN+ + + ++ A P +S Sbjct: 736 RIGGIPATLRGSGGVEGGNLAVRLPWGEVQGSGNWHDLQVTGEL-AYAPLGQGRLSGTAN 794 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL-ELSAKKSRLSGNFKISDG 281 L G+ P G V G + L + +SG ++ G Sbjct: 795 L----------FEGSYALRLAVPKLDGALRVFGKGASLTYAGSFQDGRLEVSGAYRAEAG 844 Query: 282 NVRISRYKLQSILPNSSTDEDN 303 + L+ + + Sbjct: 845 RNALEGLALKVKARDFDLEPLG 866 >gi|50120039|ref|YP_049206.1| hypothetical protein ECA1100 [Pectobacterium atrosepticum SCRI1043] gi|49610565|emb|CAG74010.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043] Length = 1256 Score = 40.6 bits (93), Expect = 0.43, Method: Composition-based stats. Identities = 34/341 (9%), Positives = 96/341 (28%), Gaps = 30/341 (8%) Query: 36 FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95 I G+ + V + +HI PS+ D +G+ ++ + +S Sbjct: 564 ITASVQGISGETVTVDHTLDVHINTLPSITLTPPFTDGVLNGAEAAQDQVISGETGI--- 620 Query: 96 LSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE 155 SG + + I ++ + + G K + + + + + + + D Sbjct: 621 -SGRGQTVSLTIGGYYVAGTVDANGHWTVTIPKDVLQNLPSDNISVLEI-----VVRDIA 674 Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215 ++ ++++ + L + + + + G D ++ Sbjct: 675 GNETIVTQNISVDTTPPTLTVSAIAQDNILNG-----MELAVDQI-----VSGTASLSEA 724 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 ++ + L Y + GN + + + + + ++ Sbjct: 725 GRTVTVTLNAKPYTATVGSDGNWSVTLPTADL-VAIADGNQNLTVTLTDAAGNTTTVTRP 783 Query: 276 FKISDGNVRISRYKLQSILPNS---------STDEDNKTKVSQDEENLLNFSENGAESMH 326 I G + ++ ++ S + + ++ S NG + Sbjct: 784 LTIDSGATTAPTITINNVADDNVIDGAEAKVSQQLSGT-TANVEAGQVVTISLNGKTYLA 842 Query: 327 DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + + L SVN + N+ Sbjct: 843 TVQSGGVWSINVSTADIALLADGPHSISVNVSNKSGNAASG 883 >gi|13471631|ref|NP_103197.1| hypothetical protein mll1661 [Mesorhizobium loti MAFF303099] gi|14022374|dbj|BAB48983.1| mll1661 [Mesorhizobium loti MAFF303099] Length = 2078 Score = 40.6 bits (93), Expect = 0.43, Method: Composition-based stats. Identities = 27/227 (11%), Positives = 59/227 (25%), Gaps = 12/227 (5%) Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179 G F +T D I + G + SD+ I ++ Sbjct: 564 GERVKFSAAATRDPQGAFAANSISLTSGSLS---ASGTASAQGSDIQADIKGTLGDVSVL 620 Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN--------KAISLKIQLFPLAYPII 231 + + + + R+A T + + + KAI L Sbjct: 621 SPMVGVPVAGGVNFALSASGARTAPDFTVSADSDSLTASGRTVKAIKLTASGKADIASPS 680 Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 D+ N++ + + +S +++SG+ + D + + L Sbjct: 681 ADVSLTGSVNDQPLDLKAALVTSEGKRSINGFLVSLGDNKVSGDLALDDKFMPLGTLTLA 740 Query: 292 SILPNSSTDEDNKT-KVSQDEENLLNFSENGAESMHDLNETDFFEEE 337 + + + + L + D T E Sbjct: 741 APAIDQLAALAGQAVTGDINGTILFAKDGDAPSVTIDAKSTSIARGE 787 >gi|329297932|ref|ZP_08255268.1| hypothetical protein Pstas_17970 [Plautia stali symbiont] Length = 1256 Score = 40.6 bits (93), Expect = 0.44, Method: Composition-based stats. Identities = 40/358 (11%), Positives = 103/358 (28%), Gaps = 56/358 (15%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 ++VLIG+G V+L + G + K +P Sbjct: 5 KKVLIGIGIFMLVLLASVAFLVGTTP----------------GLHLLFKSAD--RWVPGL 46 Query: 63 SVF-----FKDIRIDQKEDGSFESKIE--GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 S+ ++D+ + + ++ + LL + V D+ + + Sbjct: 47 SINKVEGGWRDLTLSGVKYQMPGVSVDAGRFHLALNLNCLLHSSVCVNDIALQDVSVVVD 106 Query: 116 ------------LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 G SN ++ + V I ++D S + Sbjct: 107 SKKMTPASAPPPEEESGSSNLSTPYPITLSRVSLHNINVKVDDTAISLLDFTSGLQWQDR 166 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN---------KRSAFKITANFPAKN 214 L L + +I+ + + + ++ F + Sbjct: 167 ALTLNPTHIQSLLIALPKAAKVADEQVVQPKVQLPQPDEKPLGETLQAMFAEPLLPALPD 226 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274 + L I + L + + G+ + + + + +++ + SG Sbjct: 227 FQLPLDINVQQL-LGEQLRITGDTDVAITRLLLKAKTTDRHVQLETFDIDSPQGQLNASG 285 Query: 275 NFKISD---------GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 + +++D G++ + K + I N + ++ K+ + + + A Sbjct: 286 DARLADNWPVNVVLNGSLNLDPIKGEKIKLNLAGAMRDELKLGLNLSGPVRAQLDAAA 343 Score = 37.9 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 103/338 (30%), Gaps = 31/338 (9%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL DF+ + ++G+++ + G + I V + Sbjct: 214 AMFAEPLLPALPDFQLPLDINVQQLLGEQLRITGDTDVAITRLLLKAKTTDRHVQLETFD 273 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF-----YLSSKGVSNWF 125 ID + S L+ +L+G + + + ++ LN G++ Sbjct: 274 IDSPQGQLNASGDARLADNWPVNVVLNGSLNLDPIKGEKIKLNLAGAMRDELKLGLNLSG 333 Query: 126 QRKSTMDMIHNVILEK----IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 ++ +D + + + +++ Y +L+ Q S + + + L Sbjct: 334 PVRAQLDAAAQPAVAGLPLSLKLTSPQLRWP-LTGPVQYQADNLDYQFSGKATDYVMSLR 392 Query: 182 IDSI-----KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 ++ +G GN A +L +++ + L G Sbjct: 393 TAVKGEAVPPATITLDGKGNVQQFSLDKLRVAALQGNIDLSALVDWSKAISWRSELTLAG 452 Query: 237 ---NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS----DGNVRISRYK 289 + + G + G + +LS + L GN K + +G + + Y Sbjct: 453 INTAKQYPDWPAKLDGKITTRG-SLYGGSWQLSVPQLALKGNVKQNAVSAEGTLTGNSYN 511 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 I N V + + LN + D Sbjct: 512 QWKIPGIDIALGRNHLDVKGELSDALNLDASVDAPHLD 549 >gi|118474350|ref|YP_891874.1| hypothetical protein CFF8240_0699 [Campylobacter fetus subsp. fetus 82-40] gi|118413576|gb|ABK81996.1| conserved hypothetical protein [Campylobacter fetus subsp. fetus 82-40] Length = 849 Score = 40.6 bits (93), Expect = 0.44, Method: Composition-based stats. Identities = 37/341 (10%), Positives = 91/341 (26%), Gaps = 27/341 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R +L LG + + + + + + E+ AT G KI +K Sbjct: 1 MRVLLWILGIIAVLFISAYTILFTSFGNSLMKPYVEKIATQKSGMKIELK---------K 51 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL--NFYLSSK 119 V I + + G + L+ + + + N L+ Sbjct: 52 FKVGLSKADIQAAINSELNLTVTGSYNLIKKNFDLNYTAQTRSLNSFGIDIKDNISLNGD 111 Query: 120 --GVSNWFQRKSTM---DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174 G N F + +++K +K+ D +S + +S + L Sbjct: 112 MIGNLNNFVVNGAGILVGSNMRFAIRVVNLKPLELKL-DAKSLNLAQISTIALHKPYIIG 170 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNK-------RSAFKITA-NFPAKNKAISLKIQLFPL 226 ++ + I + N ++ F I+ + +K+ Sbjct: 171 HLDATADISYANNGYQGDANLNIKKANTNNELIQNDFNISLPSNFFITAKSDIKLSGDIA 230 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 +I + +Y+ + L +L + + + K + Sbjct: 231 TAKTVIKSPIAVAAALNS-VYNISNNKLNTDLNLNIPDLLKLEPLIKQSLKGEITLNANT 289 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 + + + + + + D Sbjct: 290 QIDANKLSFLDA-QIKGLGGIVIAKLKDNKIDADIKNIKLD 329 >gi|294013201|ref|YP_003546661.1| hypothetical protein SJA_C1-32150 [Sphingobium japonicum UT26S] gi|292676531|dbj|BAI98049.1| conserved hypothetical protein [Sphingobium japonicum UT26S] Length = 1395 Score = 40.3 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 33/301 (10%), Positives = 84/301 (27%), Gaps = 19/301 (6%) Query: 26 FIDWTDFREDFERQATL---IVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82 F+D ++ RQ G I V G I I ++ ++ + + + Sbjct: 39 FLDTQPGKKFLIRQIAALKLESGMAIEV-GRIDGSIYSDMTIR--NLVLRDPKGI--FAV 93 Query: 83 IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKI 142 + + + I V ++ P + S N + ++ ++ ++ Sbjct: 94 SPEVHVVWSPFRYIDNHISVR--LLESPLVVLARSP--RFNITKTDPNAPILPDLDIDVD 149 Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202 +K R + Q ++ ++ I G + + ++ Sbjct: 150 RLKIARFLVAKPVIGQKREIA-IDGVTHIADGRAILSADAVVDSGD-RLQANLDAVPAQN 207 Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLL 261 + A + + + +D G + I SG +A Sbjct: 208 RLAMKGRLTAPKGGVIAAMSGLTDGFTATLDGRGTWQAWNGRLIAMSGKGELANIALAAR 267 Query: 262 NLELSAKKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320 + +AK G F + + + + + K + + + + Sbjct: 268 DGNFTAKGPLRPGLVFAGTVDRLTTPALDVDLFAGMNERRVNLKGSL---KSPAVAATAQ 324 Query: 321 G 321 G Sbjct: 325 G 325 >gi|16126460|ref|NP_421024.1| hypothetical protein CC_2221 [Caulobacter crescentus CB15] gi|221235241|ref|YP_002517677.1| hypothetical protein CCNA_02304 [Caulobacter crescentus NA1000] gi|13423726|gb|AAK24192.1| hypothetical protein CC_2221 [Caulobacter crescentus CB15] gi|220964413|gb|ACL95769.1| conserved hypothetical protein [Caulobacter crescentus NA1000] Length = 341 Score = 40.3 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 20/190 (10%), Positives = 55/190 (28%), Gaps = 20/190 (10%) Query: 15 VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKG-GIKIHI-----LPF-PSVFFK 67 +L W R E+Q + +G + PF ++ Sbjct: 25 FILAAILAGAWSYGWIWLRGQAEQQMDAQA-ADLRSRGYDLSWSARTFSGFPFRMNIQMS 83 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFD-MYIDQPHLNFYLSSKGVSNWFQ 126 D+R+ + ++ L A L + + + + +P ++ G + Sbjct: 84 DVRVAEPTGW--ALRLPQLKGEAAVYNLTHWVLVAPNGVVLTRPESG-DVTIAGDALRAS 140 Query: 127 RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL---SDLNLQISARFLNIISPLSID 183 + +I ++G ++ + + + + L + L + + + Sbjct: 141 ISHVTEYPP-----RISIEGAKLTFVPGANAKPFTLVSADRMQLHVRGGGPDDQGAVFFK 195 Query: 184 SIKGSVIAEG 193 + G Sbjct: 196 ADGAKTAFPG 205 >gi|319955035|ref|YP_004166302.1| hypothetical protein Celal_3540 [Cellulophaga algicola DSM 14237] gi|319423695|gb|ADV50804.1| protein of unknown function DUF490 [Cellulophaga algicola DSM 14237] Length = 1667 Score = 40.3 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 42/392 (10%), Positives = 103/392 (26%), Gaps = 41/392 (10%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +L+R+L L + + A KI + + + Sbjct: 12 ILKRILRVFAVLLLFFICSILFIRSPWGQDIIVTKVVNYAAEKTNTKIGID-RLFVTF-- 68 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYLSSK 119 ++F + + ++ + + L P++ G I + + N + Sbjct: 69 SGNIFLEGLYLEDTKG-DTLIYSKTLEANLPLAPIIFGNGITLKSLEWQGVKANISR-KE 126 Query: 120 GVSNWFQ-------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166 GV + + ++ + I + IK D + Sbjct: 127 GVEEFNFDFLIQAFATQDTVKTVQESKPLDLTIGSISLSEFDIKYNDGFLGLESDIRLGK 186 Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 L ++ ++ ++D + T + F +T + Sbjct: 187 LYLALEEFDLE---NMDFDVDNFELNNTTITYKQTKEFPVTEETTDTQLPHVSIRKFKLE 243 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 + + K I S+ + +++ +++ + + Sbjct: 244 HVTTRYNSIPD-QIVAKAEIGDFELSLEKLDLESNIFDVNY--------LSLNNSTIYLK 294 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE----TDFFEEEEKKNK 342 + +LQ N+ + T N E + N + + Sbjct: 295 QEELQLSSENTDQLVNKTTNFEW---PEYMVRVN--EIDFEKNNITYISGKQKPLAGTFN 349 Query: 343 NDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374 L +++ N DN K + E FS Sbjct: 350 PAALAISNLRLKAN-DLFYDNGKTKLSLEAFS 380 >gi|224051806|ref|XP_002200365.1| PREDICTED: AHNAK nucleoprotein 2 [Taeniopygia guttata] Length = 7739 Score = 40.3 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 36/322 (11%), Positives = 83/322 (25%), Gaps = 34/322 (10%) Query: 60 PFPSVFFKD-IRIDQKEDGS------FESKIEGLSMRAEFLPLLSGEIRVF-DMYIDQPH 111 P ++ + +++ +KE G K S G + ++ + +P Sbjct: 5197 PAATLSLEGEVKVPEKEAGKAKEGKFKMPKFGMPSFGWSSSRDTKGTVAGEMEISLQEPQ 5256 Query: 112 LNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV----KGGRIKIIDQESDQVYFLSDLNL 167 + + V V +E V + GR K+ D + + Sbjct: 5257 VTVPSGATEVEVSLPTADIQAPSVEVTVESATVAAEGEKGRFKMPDVKMPSIKL------ 5310 Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227 + L + EG ++ + S+KI + + Sbjct: 5311 -PKFKAPQAQVSLPQAEVSLPKGQEGEVTLQGPKAEASPEVAAGKAEGS-SMKIHMPKVK 5368 Query: 228 YPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 P ++ + + S V + + + G+ I ++ +S Sbjct: 5369 VPSVVFAKPTVKSPKLDTEVSLPQAEVKAADTDITITAPDITLPSVEGSLDIQRSDIDLS 5428 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLN------------FSENGAESMHDLNE-TDF 333 + L + K K+ + ++ S A+ T Sbjct: 5429 APSGEGKLELEGSGLKGKLKMPKFDKPKFTASSPKAEGPTAEVSLPSAQVDLPSTTMTAS 5488 Query: 334 FEEEEKKNKNDDLKKDDIQYSV 355 + + LK Sbjct: 5489 ADGSGFNLEKSSLKMPKADIKA 5510 Score = 39.1 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 31/270 (11%), Positives = 72/270 (26%), Gaps = 21/270 (7%) Query: 104 DMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV----KGGRIKIIDQESDQV 159 D+ I +P + + V V +E V + GR K+ D + Sbjct: 3559 DVSIQEPQVTVPSGATEVEVTLPTSDIQAPSVEVTVETATVAAEGEKGRFKMPDVK-MPD 3617 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 + + L + L + EG ++ + S+ Sbjct: 3618 VKMPSVKL-PKVKAPQAQISLPQAEVSLPKEQEGEVTLQGPKAEASPEVAAGKAEGS-SM 3675 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLLNLELSAKKSRLSGNFKI 278 KI + + P ++ + + S + + + + G+ I Sbjct: 3676 KIHMPKVKVPSVVFAKPTIKSPKLDTDVSLPQAEIKAADTDITITAPDITLPSVEGSLDI 3735 Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFS----------ENGAESMHDL 328 ++ ++ + L + K K+ + ++ S + + DL Sbjct: 3736 QTSDIDLNAPSGEGKLELEGSGLKGKLKMPKFDKPKFTASSPKTEGPTAEVSLPSAEVDL 3795 Query: 329 NETDFF---EEEEKKNKNDDLKKDDIQYSV 355 T + + LK Sbjct: 3796 PSTTVTASADGSGFNLEKPYLKMPKPDIKA 3825 Score = 37.2 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 75/303 (24%), Gaps = 27/303 (8%) Query: 72 DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVF-DMYIDQPHLNFYLSSKGVSNWFQRKST 130 KE K S G + D+ + +P + + V Sbjct: 1609 KAKEGKFKMPKFGMPSFGWSSSRDTKGTVAAEVDISLQEPQVTMPSGATEVEVSLPTADI 1668 Query: 131 MDMIHNVILEKIHV----KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186 V +E V + GR KI D + V + L + Sbjct: 1669 QAPSVEVTVETATVAAEGEKGRFKIPDVKMPSVKL-------PKVKAPQAQVSLPKAEVS 1721 Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 EG + + + S+KI + + P ++ + + Sbjct: 1722 LPKGQEGEVALQSPEAEASLEVAAGKAEGG-SMKIHMPKVKVPSVVFSKPTVKSPKMAAD 1780 Query: 247 YSG-VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305 S + + + + G+ I ++ + + L + K Sbjct: 1781 VSLPQAELKAADTDITITAPDITLPSVEGSLDIQTSDIDLKEPSGEGKLKLEGSGLKGKL 1840 Query: 306 KVSQDEENLLNFS----------ENGAESMHDLNETDFF---EEEEKKNKNDDLKKDDIQ 352 K+ + ++ S + + DL T + + LK Sbjct: 1841 KMPKLDKPKFTASSPKAECPTAEVSLPSAEVDLPSTTVTATADGSGLNLEKPSLKMPKAD 1900 Query: 353 YSV 355 Sbjct: 1901 IKA 1903 Score = 36.4 bits (82), Expect = 7.0, Method: Composition-based stats. Identities = 25/302 (8%), Positives = 80/302 (26%), Gaps = 27/302 (8%) Query: 79 FESKIEGLSMRAEFLPL--------LSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 ++ I+ + + + ++ + ++ G + + K Sbjct: 5504 PKADIKAPKVDISLPSIDITLPQASIDVQVPEATLSLEG-EAKVPEKEAGKAKEGKFKMP 5562 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + + G + S Q ++ + + + S++ +V Sbjct: 5563 KFGMPSFGWSSSRDTKGTVAAGVDISLQEPQVTVPSGATEVEVSLPTADIQAPSVEVTVE 5622 Query: 191 AEGTGNFDNKRSAF---KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 T + ++ + S+KI + + P ++ + ++ Sbjct: 5623 -TATVAAEGEKGRLKMPDVKMPDVKMPDGSSMKIHMPKVKVPSVVFSKPTVKSPKQDADV 5681 Query: 248 SG-VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 S + + + + G+ I ++ +S + L + K K Sbjct: 5682 SLPQAELKAADTDITITAPDITLPSVEGSLDIQTSDIDLSAPSGEGKLELEGSVLKGKLK 5741 Query: 307 VSQDEENLLNFS----------ENGAESMHDLNETDFF---EEEEKKNKNDDLKKDDIQY 353 + + ++ S + + DL T + + +K Sbjct: 5742 MPKFDKPKFTASSRKAEGPTAEVSLPSAEVDLPSTPVTASGDGSGLNLEKPSIKMPKADI 5801 Query: 354 SV 355 Sbjct: 5802 KA 5803 >gi|114798661|ref|YP_759363.1| hypothetical protein HNE_0634 [Hyphomonas neptunium ATCC 15444] gi|114738835|gb|ABI76960.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444] Length = 1109 Score = 40.3 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 29/297 (9%), Positives = 78/297 (26%), Gaps = 22/297 (7%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR+++G L ++ + + R+ QA + K + Sbjct: 25 RRLILGFFLLLVFSVILVWLL---------RKPIAEQALDAWCADRDLTCDAKFTQIGAG 75 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 +RI D ++ + +S R + R+ + I + L G+ Sbjct: 76 GATLTGVRISAGADVP--AEAQEVSARLSWPGFF--VPRIDGISITGLEMRGTLDPTGLK 131 Query: 123 NWFQRK-STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + + I ++ RI + L+ + ++ + Sbjct: 132 FYGLERLAAPTGGGGGTAPPIEIRDARIYLETPFGPAAATLNVSGVVPENATASLALDPA 191 Query: 182 IDSIK------GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 ++ G ++ A+ N + L A + Sbjct: 192 RLALGEARMVLGEAFLTARIVDGAVTGELRLAADEAQANGHSASGFSLAAQA-AFPLSGE 250 Query: 236 GNLFWNEKQPIYSGVF-SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291 G + G + + +S + + + +++ + Sbjct: 251 GATSLEWSARLAEGTAPEASIAGLRTRGRAEFDALPDMSASSVLDALTLTVAQAEFD 307 >gi|227113347|ref|ZP_03827003.1| large repetitive protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 4874 Score = 40.3 bits (92), Expect = 0.50, Method: Composition-based stats. Identities = 37/340 (10%), Positives = 93/340 (27%), Gaps = 28/340 (8%) Query: 36 FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95 I G + V + +HI PS+ +D +G+ ++ + + Sbjct: 555 LTASVQGISGDTVTVDHTLDVHINTLPSITLTPPFVDGVLNGAEAAQDQVIRGETGI--- 611 Query: 96 LSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE 155 SG + + I ++ + + G K + + + + + + + D Sbjct: 612 -SGRGQTVSLTIGGNYVTGTVDANGNWTVTIPKDVLQSLPSDNISVLEI-----VVRDIA 665 Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215 ++ D+ + + L + + D + G D I Sbjct: 666 GNETIVTQDITVDTTPPTLTVSAIAQDDVLNG-----AELAVDQV-----INGTASFSEA 715 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 ++ + L Y + GN + + + + + ++ Sbjct: 716 GRTVTVTLNDKPYTTTVGNDGNWSITLPTADL-VAIADGNQNLTVTLTDAAGNTTTVTRP 774 Query: 276 FKISDGNVRISRYKLQSILPNSSTD-EDNKTKVSQDEE-------NLLNFSENGAESMHD 327 I G + ++ ++ D + K ++ S NG + Sbjct: 775 LTIDSGATTAPTITINNVADDNVIDGAEAKVSQQLSGTTTNVEAGQVVTISLNGKTYLAT 834 Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + + L SVN + N+ Sbjct: 835 VQSGGVWSINVSTADIALLADGAHSISVNVSNKAGNTASG 874 >gi|165933057|ref|YP_001649846.1| hypothetical protein RrIowa_0566 [Rickettsia rickettsii str. Iowa] gi|165908144|gb|ABY72440.1| hypothetical protein RrIowa_0566 [Rickettsia rickettsii str. Iowa] Length = 891 Score = 40.3 bits (92), Expect = 0.56, Method: Composition-based stats. Identities = 40/333 (12%), Positives = 109/333 (32%), Gaps = 41/333 (12%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M++++ G+ FS++L F+++ T +G G IK+H P Sbjct: 16 MIKKIAAGVIICFSLLLFIMCGALSFVNYNS----VTNNFTSHLGIAKENIGKIKMHKFP 71 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + IR + +E + + L+ ++ + I S Sbjct: 72 LSYLVIETIR------EEGKLDLEQIKIHFSLWSLIKFNPKINKIDILDAKFY---SHSN 122 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 V N + + + L+ I++ + II+++ + ++ L+ Sbjct: 123 VLNIYNHEELIKNFFKYKLQNINLNVTNLSIINKQDYSILNFNNCILK------------ 170 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID---LFGN 237 +++ + I + T N+ KI+ + ++ + + + Y + Sbjct: 171 KENALSSNYIFKTTSNYIG-----KISGSINKRDDIVDFSLNIDNNDYGFKLSQIYKDSK 225 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSA----KKSRLSGNFKISDGNVRISRYKLQSI 293 L + + SV + LN + + + N ++ + + + Sbjct: 226 LTSGSGEYQIKNLASVMYNILPDLNHLFNKFNQHEAVNVKFNISNNEDAIELKDIVI--- 282 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 +S +++++ N + + Sbjct: 283 -ASSFIIGHGFVNIAKNDNITTNVKLDFPKIDL 314 >gi|332970993|gb|EGK09966.1| hypothetical protein HMPREF0476_0823 [Kingella kingae ATCC 23330] Length = 1286 Score = 40.3 bits (92), Expect = 0.56, Method: Composition-based stats. Identities = 40/381 (10%), Positives = 94/381 (24%), Gaps = 38/381 (9%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKI---AVKGGIKIHIL 59 R + LG + ++ A + ++ Q + G +I + G I Sbjct: 24 RWLKYTLGGVVVLLGTSAGALTWLLNTESGLRFAVYQLPKLGGVQITSRTLNGSI----- 78 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-NFYLSS 118 I + +I L + L + V ++ H+ N Sbjct: 79 -LGGFSADKIAVQTPSAD---IQISQLQFAWQPNALWQRHLHVQKLHAGDIHIDNKATPP 134 Query: 119 KGVSNWFQRKSTMDMIHNVILEKIH---VKGGR-----IKIIDQESDQVYFLSDLNLQIS 170 + + + + L+ + + G+ ++ I+ + LN+ Sbjct: 135 EPNRPKSAPLERIQLPFTLALDSLQTGAITQGKDKTEIVRGINASYVYNHEQHQLNVHSL 194 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + GT D + + LK+ + Sbjct: 195 RNHWSNTHGKLAMRTVAPFELGGTLLSDGELDGIVVENILDLSGSLHDLKVNTDLTGNGV 254 Query: 231 IIDLFGNLFW-NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289 + +L + + G S + L + I+ Sbjct: 255 GLHGSTHLRLFADNFGSMINHVKITGQGINPQAFNPSLPRGNLFFDIGITP--------- 305 Query: 290 LQSILPNSSTDEDNKTKVSQD---EENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346 N + D K + D + + +N++ E + + Sbjct: 306 ----NLNDNIALDGKLDLRNDTPEAADKNGLPIRTLQGEFHVNDSGAVEINQVQAALMQQ 361 Query: 347 KKDDIQYSVNKKEEKDNSHDK 367 + V ++ N K Sbjct: 362 GTLSLSGGVYAQKRTLNLTAK 382 >gi|94501266|ref|ZP_01307787.1| hypothetical protein RED65_02599 [Oceanobacter sp. RED65] gi|94426537|gb|EAT11524.1| hypothetical protein RED65_02599 [Oceanobacter sp. RED65] Length = 714 Score = 39.9 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 130/366 (35%), Gaps = 30/366 (8%) Query: 18 VGAFTVPLFIDWTDFREDFER-QATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ--K 74 P+F + E A K+ ++ ++ ++ + Sbjct: 20 ASLQLAPMF-----AIQWLEDFYAQQGPNHKLQIQ-------NWSLNLIDGELALSNIHA 67 Query: 75 EDGSF-ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM 133 + + ++ I+ +S+ +LPL + ++ + ++ ++ + +S + Sbjct: 68 KWSTDQQATIDDISVDIRWLPLFNKQLVMNEIQLNGVRIPITEDDSNLSIAGIQIPLNGP 127 Query: 134 IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193 + + K I ++ + ++ +N+Q LN+ + LS + + Sbjct: 128 KSSNTNQTSDNKDDNIDAVESGNPWAIEINSINIQQHTYQLNMKA-LSSKVMIEKLSLSN 186 Query: 194 TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253 + +N+ ++ + + L + I++ G+LF K P +SG + Sbjct: 187 FHSLENRETSINLEGKIANLLMS-----NLAQADTELSINVQGSLFSLMKSPKFSGSVLI 241 Query: 254 AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313 L N R+ G I + + + L + TD+ + ++ D+ Sbjct: 242 E--DLVLQNPIAQLASLRIDG-LNIEEQKLVSNDLILSGLALGEQTDK--QFWLTLDKYW 296 Query: 314 LLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK--EEKDNSHDKENQE 371 L + ++ + +++N +++ I S N + EE NS +K+N Sbjct: 297 LNQLTLTSFGLTTGIHYVSGLKVNNYRDQNGEIEYS-IAGSGNTEKPEEHQNSIEKDNSA 355 Query: 372 NFSGDK 377 N + D Sbjct: 356 NSADDA 361 >gi|270265030|ref|ZP_06193293.1| putative signal peptide protein [Serratia odorifera 4Rx13] gi|270040964|gb|EFA14065.1| putative signal peptide protein [Serratia odorifera 4Rx13] Length = 1272 Score = 39.9 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 44/345 (12%), Positives = 102/345 (29%), Gaps = 46/345 (13%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71 F PL D D R + I G+++ + G ++ I + + + Sbjct: 229 LFAKPLLPDLPDIRLPLDITVKEISGEQLRLTGDTEVLITSLLLQASTKDQHIQLDNFDV 288 Query: 72 DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF----------YLSSKGV 121 + L+ + +G + + + ++ LN L+ G Sbjct: 289 KSPQGTLSAQGQATLTGNWPVEMVANGTLNIEPLKGEKVKLNLGGGLREELKVALNLSGP 348 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 T + L + ++ ++K + Y ++D L+ + + + Sbjct: 349 VGAQLDVQTQLAEAGLPLA-LTLQSKQLKWP-LSGEAQYQINDFRLRFNGKATDYALSTR 406 Query: 182 IDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 + + +G GN + + A +L +++ + L G Sbjct: 407 ANIKGQDLPPAVLTLDGKGNVEQFKLDRLRLAALQGNADLSALVDWSKAISWNSQLMLSG 466 Query: 237 ---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---GN 282 W E G + G +L L+ + K+++++ +S G Sbjct: 467 INTAKQWPEWPAKLDGKITTRGSLHGGNWQLQVPVLQLDGNVKQNKVTARGSLSGNAAGQ 526 Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 +I L + + + +E N N D Sbjct: 527 WKIPGIDLTLGR--NQLNVKGQL-----DEKSWNLDANIDAPRLD 564 >gi|148259602|ref|YP_001233729.1| hypothetical protein Acry_0586 [Acidiphilium cryptum JF-5] gi|146401283|gb|ABQ29810.1| hypothetical protein Acry_0586 [Acidiphilium cryptum JF-5] Length = 391 Score = 39.9 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 28/256 (10%), Positives = 77/256 (30%), Gaps = 21/256 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV---GKKIAVKGGIKIHI 58 +RR++ L + + +G + + QA + G ++ G + Sbjct: 1 MRRLVRFLSLVVVLAALGWLGLWWY--AESRLALAVDQAAARLHAAGWTVS-HGAVTRGT 57 Query: 59 LPFPS-VFFKDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVF---DMYID-QPH 111 PF + V D+R+ + + +I + + L+ ++ M ++ P Sbjct: 58 SPFVADVRVADLRLTPPVADGPAPTLEIPAVDLVVHPAAPLTLDLGFATVWRMALEGGPS 117 Query: 112 LNFY---LSSKGVSNWFQRKSTMDMI-----HNVILEKIHVKGGRIKIIDQESDQVYFLS 163 +++ + + ++ + ++ + Sbjct: 118 FTLRFGSIAADDRFDLADLLHHAPDPLRAGAFHATDLRVDSENTNFTLVSIAAIDASGTR 177 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 + + + + L ++ + G F K +A + A+ ++ L Sbjct: 178 NPDAGPDSMAATLHESLRGLALSPLFVTLGNLPFGGKLTALSVDLALFGPAAALPARLTL 237 Query: 224 FPLAYPIIIDLFGNLF 239 P A + NL Sbjct: 238 PPGARWLAPGAAANLP 253 >gi|91213894|ref|YP_543880.1| ShlA/HecA/FhaA exofamily protein [Escherichia coli UTI89] gi|91075468|gb|ABE10349.1| putative member of ShlA/HecA/FhaA exoprotein family [Escherichia coli UTI89] gi|307629411|gb|ADN73715.1| hemagglutinin-related protein [Escherichia coli UM146] Length = 3262 Score = 39.9 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 52/183 (28%), Gaps = 13/183 (7%) Query: 137 VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196 + L + D + + L L A L + G + G + Sbjct: 688 LTLNTASLSNPGKITADTLNVRATTLDGDGLLQGAGALALAGDTLSQGRNGRWLTAGDLS 747 Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN-------EKQPIYSG 249 K T N + +L +Q A + GNL + + G Sbjct: 748 LRGK------TLNTAGTTQGQNLTVQADNWANSGSVLATGNLTASATGQLTSTGDIMSQG 801 Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 ++ + LSA L+GN + G V+ + ++ +S ++ Sbjct: 802 DTTLKAATTDNRGSLLSAGTLSLNGNSLDNSGTVQGNHITIRQNSVTNSGTLTGIAALTL 861 Query: 310 DEE 312 Sbjct: 862 AAR 864 >gi|257126522|ref|YP_003164636.1| hypothetical protein Lebu_1778 [Leptotrichia buccalis C-1013-b] gi|257050461|gb|ACV39645.1| protein of unknown function DUF490 [Leptotrichia buccalis C-1013-b] Length = 1526 Score = 39.9 bits (91), Expect = 0.65, Method: Composition-based stats. Identities = 24/179 (13%), Positives = 53/179 (29%), Gaps = 10/179 (5%) Query: 139 LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD 198 L + +K G++ +D + D + ++N I + I + V + Sbjct: 272 LGNLKIKNGKLSYVDFDGD----IENVNAVIDLKKEKITVKADTKLSEQPVSLALDYLPE 327 Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPL---AYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255 + K+ AN + K+ I +L N+ K+ G FS Sbjct: 328 KNKLNLKLNANNVPFEEIARYKVIKDTKFTATGGITGNLDVNVDIKGKKATLDGKFSSDN 387 Query: 256 DFSKLLNLELSAKKSRL-SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313 N + ++ +++ + S + + K +N Sbjct: 388 ITISNYNFQNVKTAMKIADNKVTLNNTTFVFNEE--ISGFRINQDVKIGKFVYDLKNKN 444 >gi|157828348|ref|YP_001494590.1| hypothetical protein A1G_02685 [Rickettsia rickettsii str. 'Sheila Smith'] gi|157800829|gb|ABV76082.1| hypothetical protein A1G_02685 [Rickettsia rickettsii str. 'Sheila Smith'] Length = 876 Score = 39.9 bits (91), Expect = 0.65, Method: Composition-based stats. Identities = 40/333 (12%), Positives = 109/333 (32%), Gaps = 41/333 (12%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M++++ G+ FS++L F+++ T +G G IK+H P Sbjct: 1 MIKKIAAGVIICFSLLLFIMCGALSFVNYNS----VTNNFTSHLGIAKENIGKIKMHKFP 56 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + IR + +E + + L+ ++ + I S Sbjct: 57 LSYLVIETIR------EEGKLDLEQIKIHFSLWSLIKFNPKINKIDILDAKFY---SHSN 107 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 V N + + + L+ I++ + II+++ + ++ L+ Sbjct: 108 VLNIYNHEELIKNFFKYKLQNINLNVTNLSIINKQDYSILNFNNCILK------------ 155 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID---LFGN 237 +++ + I + T N+ KI+ + ++ + + + Y + Sbjct: 156 KENALSSNYIFKTTSNYIG-----KISGSINKRDDIVDFSLNIDNNDYGFKLSQIYKDSK 210 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSA----KKSRLSGNFKISDGNVRISRYKLQSI 293 L + + SV + LN + + + N ++ + + + Sbjct: 211 LTSGSGEYQIKNLASVMYNILPDLNHLFNKFNQHEAVNVKFNISNNEDAIELKDIVI--- 267 Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 +S +++++ N + + Sbjct: 268 -ASSFIIGHGFVNIAKNDNITTNVKLDFPKIDL 299 >gi|170739247|ref|YP_001767902.1| hypothetical protein M446_0919 [Methylobacterium sp. 4-46] gi|168193521|gb|ACA15468.1| hypothetical protein M446_0919 [Methylobacterium sp. 4-46] Length = 611 Score = 39.9 bits (91), Expect = 0.67, Method: Composition-based stats. Identities = 43/324 (13%), Positives = 98/324 (30%), Gaps = 43/324 (13%) Query: 36 FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDI--RIDQKEDGSFESKIEGLSMRAEFL 93 + + G+ V+GG + + P +V +D+ R D G+ I L + L Sbjct: 33 AQERLAAETGRTWTVRGGASLSLWPRVAVVLRDVGTRTDYPGVGTASLDIASLRVTGAPL 92 Query: 94 PLLSGEIRVFDMYIDQPHLNFY-------------------------LSSKGVSNWFQRK 128 LL+G + + +++P L + Sbjct: 93 DLLAGR-DLAAIEVERPVLRWPAEWWRAGAPAGAAAAAGAAPDPDPAPDPAREQAGPAGH 151 Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188 + E++ V GG + ++ ++ V + DL+ + AR + G+ Sbjct: 152 AGHAGSAGPRPERVRVTGGALLLVKGDT-VVASVEDLSAEALARAGGYEVKAGGRTGGGA 210 Query: 189 VIAEGTGNF--DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 + + + + + + P A L+ + + + L L Sbjct: 211 ARCDVSVAPPEEGESAPLTFSCRVPGL-GAEPLEGRADAALHGAALTL-ARLSAQVGAVP 268 Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306 ++G V + ++L+ L + D ++ + + D + + Sbjct: 269 FTGAVVVDLTAKPFVRIDLAGGSLDLPAAGGLGDASLDPALLR----------SFDGRAR 318 Query: 307 VSQDEENLLNFSENGAESMHDLNE 330 + S A L E Sbjct: 319 IRLGALRAGGLSLTEALLDGKLTE 342 >gi|148262752|ref|YP_001229458.1| hypothetical protein Gura_0673 [Geobacter uraniireducens Rf4] gi|146396252|gb|ABQ24885.1| hypothetical protein Gura_0673 [Geobacter uraniireducens Rf4] Length = 280 Score = 39.9 bits (91), Expect = 0.67, Method: Composition-based stats. Identities = 32/257 (12%), Positives = 78/257 (30%), Gaps = 19/257 (7%) Query: 1 MLRRVLIGLG-FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59 M RR LI +G + + + FI + + R G + + Sbjct: 1 MNRRRLILMGWGIPAALFCLIILTIAFIPGKELQGVLARALENQ-GYTMR---TTSFGLA 56 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRV---FDMYIDQPHLNFYL 116 + +++ + ++ K + + + LPL +G++ + + + F Sbjct: 57 FPLGIRAQNLELGSEQG--PLLKFDRATAKIRILPLFAGKVVIGFQGTIGKGEVKGEFAP 114 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIID--------QESDQVYFLSDLNLQ 168 G S ++ I G +++ D +++ +LQ Sbjct: 115 LKNGSSTLEIAGVQLEDIPFFKTVTGAQVKGELRVKGNFKGKQNAATGDLQLAVTEAHLQ 174 Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228 + S +I+G + G G + + + L + Sbjct: 175 GVKIGQMPLPDASYKTIQGMLRIGG-GKATLESLNLEGEGIYARLKGDTPLTTPMSAAPL 233 Query: 229 PIIIDLFGNLFWNEKQP 245 + ++L + +KQ Sbjct: 234 NLTLELMPKAEFLDKQK 250 >gi|223937387|ref|ZP_03629292.1| conserved hypothetical protein [bacterium Ellin514] gi|223893938|gb|EEF60394.1| conserved hypothetical protein [bacterium Ellin514] Length = 258 Score = 39.9 bits (91), Expect = 0.68, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 72/260 (27%), Gaps = 34/260 (13%) Query: 2 LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDF-REDFERQATLIVGKKIAVKGGIKI 56 +++ LI GLG L V LV F ++ E I + + G I Sbjct: 1 MKKTLIRIVLGLGILLVVALVAV-----FFSLNSIVKKGVETVGPQITKVDVKL-GSANI 54 Query: 57 HILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-- 112 + + E ++ + + + +LS I V + I P + Sbjct: 55 SPFGGSG-QLSKLFVGNPEGYKTASAIQVGDVKVAVKVGSVLSDTIMVEQINIQAPEITM 113 Query: 113 --------------NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI----IDQ 154 N +S+ + I++ I V G ++ + + Q Sbjct: 114 EGTLTGNNLSKILENLNSTSETKEKVKNEPTAGKKEKKFIVKDIVVNGAKVHLNITALGQ 173 Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214 + D++LQ +S + I G K A Sbjct: 174 TLGMTVPIPDIHLQNVGTGEGGVSAAELSRQILKPILAGAVEAGTKAIADGGKQLKDIGK 233 Query: 215 KAISLKIQLFPLAYPIIIDL 234 + A + DL Sbjct: 234 NLGKGSVDDLNKAAKGVTDL 253 >gi|282857275|ref|ZP_06266514.1| hypothetical protein HMPREF7215_2454 [Pyramidobacter piscolens W5455] gi|282584880|gb|EFB90209.1| hypothetical protein HMPREF7215_2454 [Pyramidobacter piscolens W5455] Length = 801 Score = 39.9 bits (91), Expect = 0.70, Method: Composition-based stats. Identities = 40/321 (12%), Positives = 95/321 (29%), Gaps = 20/321 (6%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++ IG+ L + +V T+ + + +++ G P Sbjct: 1 MKKFFIGIAVLLAAAIVAVCTLD--VGTGWIAQKGAEYVANTYNLGVSIGGAKG---NPV 55 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 F DI + DG+ K + + L LL+G + + + + + Sbjct: 56 KGYTFNDIELT--RDGTSLIKAGKIFVDPALLKLLTGNVALDWVELGGIKSTIPHLLQLA 113 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + RK T+ + +++ GG + + E+ L+ L ++ S + S Sbjct: 114 EIFTGRKVTLPSAVPLNDLQLNSVGGTLDGNEAEAAFDIALNGLPMKGSFKVSMAPSLTI 173 Query: 182 IDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 + + + K + +L QL + + Sbjct: 174 SKGDIQTAGGTISVSGGVTPELNLKAAVSKVQVGDLSALVPQLNSFLVKGRVTADMTVTG 233 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 P +G S + +SA + + D V + + +I + Sbjct: 234 ALDNPAAAGTVSFD--DGSAMGFPVSA-----NATVAMKDMKVNLKPLAVSAIGIPTK-- 284 Query: 301 EDNKTKVSQDEE-NLLNFSEN 320 + + + + N Sbjct: 285 --GEVFADLGGKTPSIKVNMN 303 >gi|325917409|ref|ZP_08179621.1| hypothetical protein XVE_3617 [Xanthomonas vesicatoria ATCC 35937] gi|325536366|gb|EGD08150.1| hypothetical protein XVE_3617 [Xanthomonas vesicatoria ATCC 35937] Length = 859 Score = 39.9 bits (91), Expect = 0.71, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 84/312 (26%), Gaps = 39/312 (12%) Query: 46 KKIAVKGGIKIHILPFPSVFFKDIRIDQKE----------DGSFESKIEGLSMRAEF--- 92 +++ ++G ++ + F + + + S + L + A Sbjct: 284 RQLRIEGDGRLQLGLFKQLRGGPMELFPSRAVFDNARVHWGKSELLRNGQLRLEASIARH 343 Query: 93 -------LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVK 145 L LL + ++ D L+ +++G R + + ++ Sbjct: 344 APAQARGLALLQLTDALVAVHGDTAALDVTRTAQGRHTVVARPGKGRADGELRWTRGALQ 403 Query: 146 GG-----RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200 G R + D L +L Q+ ++ + + + + + Sbjct: 404 AGSQLHWRAPLHDSTRTPAALLGELAAQLQVDDAMRLTVSMPEPADAGLTLDADLRVEGR 463 Query: 201 RSAF-KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259 + I P + L QL L++ P ++ GD Sbjct: 464 QLPLHSIRDLLPRTSGHARLHWQLASLSW-----------IPALFPDVD-WLTLEGDGLV 511 Query: 260 LLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319 +L ++ + ++ + +I +S D + L Sbjct: 512 DADLRIARGQLGAGSRLQVPHVRAHVGVM-GHAIDGQASADLRVDADANSQLLPALALQM 570 Query: 320 NGAESMHDLNET 331 H T Sbjct: 571 QQFSIAHGDAPT 582 >gi|260464271|ref|ZP_05812463.1| protein of unknown function DUF490 [Mesorhizobium opportunistum WSM2075] gi|259029895|gb|EEW31179.1| protein of unknown function DUF490 [Mesorhizobium opportunistum WSM2075] Length = 2018 Score = 39.9 bits (91), Expect = 0.74, Method: Composition-based stats. Identities = 19/224 (8%), Positives = 53/224 (23%), Gaps = 7/224 (3%) Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS-DLNLQISARFLNIIS 178 G + + I + G + S Q + D+ ++ + + Sbjct: 505 GRVKFSAAATRDPQGA-FAANSISLTSGSLSASGTASMQGTDIQADIKGKLGDVSVLSPT 563 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK----AISLKIQLFPLAYPIIIDL 234 + +G ++ + I L D+ Sbjct: 564 VGIPVAGGVGFALSASGALTAPDFTVSADSDSLTASGRTVKTIKLTASGKADIANPSADI 623 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 N++ + + +S +++SG+ + D + + L + Sbjct: 624 SLTGAVNDQPLDVKASLVTSEGKRSINGFLVSLGDNKVSGDLALDDKFMPLGTLTLAAPA 683 Query: 295 PNSSTDEDNKTKV-SQDEENLLNFSENGAESMHDLNETDFFEEE 337 + + + + + D T E Sbjct: 684 IDQLAALAGQAVTGDINGTIDFAKAGDVPSVAIDAKSTSIARGE 727 >gi|296328062|ref|ZP_06870596.1| conserved hypothetical protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154838|gb|EFG95621.1| conserved hypothetical protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 495 Score = 39.9 bits (91), Expect = 0.77, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 8/109 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++ IG+ LF V++V +E ER+ + + + G + + Sbjct: 1 MKK-FIGILLLFIVIVVTILYFARDF---LLKEYLERKMSKANNAPVTI-GSVDLDYFEG 55 Query: 62 PSVFFKDIRI-DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 V KDI+I I+ L + I D ID Sbjct: 56 -YVTLKDIKIMSNLHKDEIFISIDELKSYYDI-DFRKKVITFDDTEIDG 102 >gi|194365060|ref|YP_002027670.1| peptidase S45 penicillin amidase [Stenotrophomonas maltophilia R551-3] gi|194347864|gb|ACF50987.1| peptidase S45 penicillin amidase [Stenotrophomonas maltophilia R551-3] Length = 775 Score = 39.5 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 33/380 (8%), Positives = 95/380 (25%), Gaps = 41/380 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +RR + + +++ + + A + + + ++ Sbjct: 1 MRRTWRWVLGVLIAIVLVTVLGLWLLLRGSLADLDGEHALPGLARPVTIERD-------- 52 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEF--LPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + I + + + + + L+ + P + + Sbjct: 53 ---ALGVVTITAGSQADAMRALGHVHAQERYFEMDLMRRSAAGELSALFGPKA---IDAD 106 Query: 120 GVSNWFQRKSTMDMIHNVIL-EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + ++ + L + I + L+DL+++ A L S Sbjct: 107 KRMRVHRLRARTEANMQAALGDNIEAVSAYV------GGVNEGLTDLSVRPWAYLLLRQS 160 Query: 179 PLSI---DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY--PIIID 233 P DS+ + N ++ ++ A+ I + P+ + Sbjct: 161 PQPWQASDSVLAGLAMYADLQDPNNQTELALSRIRAVVPPALYALIAHDGTEWDAPLFGE 220 Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293 GN + + + + + ++G + L Sbjct: 221 ATGNAALPDASQLDLRTLKGKQGTEQEEADVIGSNNFAVAGALTADGRAIVADDMHLGLR 280 Query: 294 LP----------NSSTDEDNKTKV---SQDEENLLNFSENGAESMHDLNETDFFEEEEKK 340 P + V S + NG + N + + Sbjct: 281 APGLWFRVRLRYPDPQAAGGQVDVTGFSLPGLPAVIVGSNGHVAWGFTNSYIDTADYRTE 340 Query: 341 NKNDDLKKDDIQYSVNKKEE 360 N + + + +V + + Sbjct: 341 PANAAVTVHEERIAVAGQAD 360 >gi|253582390|ref|ZP_04859613.1| predicted protein [Fusobacterium varium ATCC 27725] gi|251835929|gb|EES64467.1| predicted protein [Fusobacterium varium ATCC 27725] Length = 1479 Score = 39.5 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 38/387 (9%), Positives = 104/387 (26%), Gaps = 64/387 (16%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 ++++ GL L + + E + +G KI+ I + Sbjct: 10 KKIITGLSLLLILAGGYWSVKYHL------SKTVEIILQIALGPKISSS---SIEFKRYG 60 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG-- 120 + KD+++ + + + L ++R+ ++ I N G Sbjct: 61 LIEIKDLKLIN--NKKTIIDAPKVELLYSKESL--KKLRIEEIIIYDGIANITREKNGDI 116 Query: 121 -------------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS---- 163 ++ + V +++I D + Sbjct: 117 NIVAAFTGESKEGKNDTEAEEKEYKPGIGVPIDRITAINATTNYTDLSYTNPIQETAYGT 176 Query: 164 ----------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA----N 209 +NL + N + ++++ K ++ A Sbjct: 177 NGFLTFSKEKGINLIFKGKNENQVYTFALNTNKEPYDINIKLENIAVKTELLQYAYDGDE 236 Query: 210 FPAKNKAISLKIQLFPLAYPIIID----------LFGNLFWNEKQPIYSGVFSVAGDFSK 259 K ++L + + P D L ++ +E + G + + Sbjct: 237 VSYKGGVLNLDLSISPKGLFGNADFKDVTVRYKELDTDVKVSEGTVDFQGKTVIVKADYE 296 Query: 260 LLNLELSAKKSRLSGNFKIS--DGNVRISRYKLQSILPNSSTDEDN------KTKVSQDE 311 + + + I NV + + S+ + + +N K ++ + Sbjct: 297 VFDTKEKFLLVYADDELNIDFAAKNVTYPQIQKYSLAKDLNLPLENLIVNNVKFNLNLNP 356 Query: 312 ENLLNFSENGAESMHDLNETDFFEEEE 338 + + + +LN + + Sbjct: 357 QKEFKVTIDFLSKDFNLNNLELKNTKG 383 >gi|188989963|ref|YP_001901973.1| hypothetical protein xccb100_0568 [Xanthomonas campestris pv. campestris str. B100] gi|167731723|emb|CAP49903.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris] Length = 818 Score = 39.5 bits (90), Expect = 0.85, Method: Composition-based stats. Identities = 31/283 (10%), Positives = 75/283 (26%), Gaps = 34/283 (12%) Query: 31 DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE----------DGSFE 80 F Q + +++ + G ++ F + I + G+ Sbjct: 228 QFDRIVAEQVQALTLRQLQIAGDGQLQFGLFKQLRGGPIEVFPSRAVFEHATLHWAGTEL 287 Query: 81 SKIEGLSMRAEF----------LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 + L M A L +L + + D L ++G + R Sbjct: 288 LRNGQLRMEASIARHTAAQARGLAVLQLTDALIGVRGDTAALEVTRDAQGKTRLKTRAGQ 347 Query: 131 MDMIHNVILEKIHVKGGR-IKII----DQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 + + ++ G ++ D L +L Q+ + + Sbjct: 348 GRADGELRWARGELQPGSHLQWRTPLHDGTRTPNALLGELAAQLQVDQDMRLRVSMPEPA 407 Query: 186 KGSVIAEGTGNFDNKRSAFKITAN-FPAKNKAISLKIQLFPLAYPI-------IIDLFGN 237 + + +R + N P + + QL L++ + L G+ Sbjct: 408 DAGLTLDADLRVQGRRLPLQAPRNLLPRTSGHARMHWQLASLSWIPALFPGVDWLTLEGD 467 Query: 238 LFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKIS 279 + I G + + + + + + G Sbjct: 468 GLVDADLRIVRGQLAAGSRLQVPRVTARVGVMEHAIEGQASAD 510 >gi|22124574|ref|NP_667997.1| hypothetical protein y0661 [Yersinia pestis KIM 10] gi|45440414|ref|NP_991953.1| hypothetical protein YP_0560 [Yersinia pestis biovar Microtus str. 91001] gi|108806071|ref|YP_649987.1| hypothetical protein YPA_0073 [Yersinia pestis Antiqua] gi|108813427|ref|YP_649194.1| hypothetical protein YPN_3267 [Yersinia pestis Nepal516] gi|153997300|ref|ZP_02022400.1| putative exported protein [Yersinia pestis CA88-4125] gi|162418694|ref|YP_001608259.1| hypothetical protein YpAngola_A3963 [Yersinia pestis Angola] gi|165928170|ref|ZP_02224002.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165937411|ref|ZP_02225974.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011314|ref|ZP_02232212.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166214004|ref|ZP_02240039.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167401207|ref|ZP_02306707.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420577|ref|ZP_02312330.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423646|ref|ZP_02315399.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469957|ref|ZP_02334661.1| hypothetical protein YpesF_19199 [Yersinia pestis FV-1] gi|218930537|ref|YP_002348412.1| hypothetical protein YPO3523 [Yersinia pestis CO92] gi|229839177|ref|ZP_04459336.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896666|ref|ZP_04511833.1| conserved protein [Yersinia pestis Pestoides A] gi|229899741|ref|ZP_04514882.1| conserved protein [Yersinia pestis biovar Orientalis str. India 195] gi|229903903|ref|ZP_04519016.1| conserved protein [Yersinia pestis Nepal516] gi|270489108|ref|ZP_06206182.1| conserved hypothetical protein [Yersinia pestis KIM D27] gi|294505349|ref|YP_003569411.1| hypothetical protein YPZ3_3240 [Yersinia pestis Z176003] gi|21957375|gb|AAM84248.1|AE013668_7 hypothetical protein y0661 [Yersinia pestis KIM 10] gi|45435271|gb|AAS60830.1| putative exported protein [Yersinia pestis biovar Microtus str. 91001] gi|108777075|gb|ABG19594.1| hypothetical protein YPN_3267 [Yersinia pestis Nepal516] gi|108777984|gb|ABG12042.1| hypothetical protein YPA_0073 [Yersinia pestis Antiqua] gi|115349148|emb|CAL22111.1| putative exported protein [Yersinia pestis CO92] gi|149288937|gb|EDM39017.1| putative exported protein [Yersinia pestis CA88-4125] gi|162351509|gb|ABX85457.1| conserved hypothetical protein [Yersinia pestis Angola] gi|165914516|gb|EDR33130.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. IP275] gi|165919857|gb|EDR37158.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989698|gb|EDR41999.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166204799|gb|EDR49279.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166961383|gb|EDR57404.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049232|gb|EDR60640.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057816|gb|EDR67562.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229679673|gb|EEO75776.1| conserved protein [Yersinia pestis Nepal516] gi|229687233|gb|EEO79308.1| conserved protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695543|gb|EEO85590.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700444|gb|EEO88476.1| conserved protein [Yersinia pestis Pestoides A] gi|262363414|gb|ACY60135.1| hypothetical protein YPD4_3231 [Yersinia pestis D106004] gi|262367211|gb|ACY63768.1| hypothetical protein YPD8_3096 [Yersinia pestis D182038] gi|270337612|gb|EFA48389.1| conserved hypothetical protein [Yersinia pestis KIM D27] gi|294355808|gb|ADE66149.1| hypothetical protein YPZ3_3240 [Yersinia pestis Z176003] Length = 1305 Score = 39.5 bits (90), Expect = 0.85, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 105/344 (30%), Gaps = 45/344 (13%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL DFR + Q I G+++ + G ++ I + + Sbjct: 262 ALFAKPLLPALPDFRLPLDLQIEEISGQQLRLTGDNEVLISSLLLQASTQDQRITLDTLE 321 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN----------FYLSSKG 120 I + G L+ + +++ + + + ++ L L+ G Sbjct: 322 IKSPQGGLSAQGQATLADKWPLDLVVNSALNIDSLKGEKVKLTVGGALREELKVTLNLSG 381 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + T + L + ++ +++ + Y +++L ++++ + + + Sbjct: 382 PVSAQLETETSLAKAGLPL-SLTLQSKQLRWP-LTGEPQYQMNNLRMRLNGQATDYALSI 439 Query: 181 SIDSIKGS-----VIAEGTGN---FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 D EG GN F+ R + + + + + Sbjct: 440 RSDIKGTDLPPAVFTLEGKGNVEQFNLTRLRLAALQGHTDLTGVVDWRQAISWNSVLTLS 499 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281 + W E G G L L+ + K++R++ ++ G Sbjct: 500 GINMAKQWPEWPAKLEGKIVTRGSIHGGSWQLQVPELVLDGNVKQNRVTARGSLTGNAAG 559 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 I L + D + ++ LL+ + + + Sbjct: 560 QWHIPGINLALGR--NKLDMKGE----LNDNWLLDANVDAPQLD 597 >gi|292618776|ref|XP_684581.4| PREDICTED: neuroblast differentiation-associated protein AHNAK [Danio rerio] Length = 3307 Score = 39.5 bits (90), Expect = 0.89, Method: Composition-based stats. Identities = 44/358 (12%), Positives = 99/358 (27%), Gaps = 64/358 (17%) Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG------EIRVFDMYIDQPHLN 113 P + + I + + KI+ ++ + + G + + + + P+L+ Sbjct: 744 PSSKLKLQKFGISGSKKKGPDLKIKSPNLNIKSPKMKGGIDTPDMDPTLPQVNLKAPNLD 803 Query: 114 FY------LSSKGVSNWFQRKSTMDMIHNVILE-----------------KIHVKGGRIK 150 G + ++ ++ + G I Sbjct: 804 LKSPDIDLKDPSGKFKMPSLGLSGLKEPHINVDAGIDQPDLNVSPLTPKLNAGINGPDID 863 Query: 151 IIDQESDQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF-----DNKR 201 I +D +DL L S + + + G + + D Sbjct: 864 IHGPHADFKGLKTDLKLPDMDMPSGKKKMPNFKMPSFGLTGPKLKTPDYDLKHPDMDLSP 923 Query: 202 SAFKITANFPAKNKAISL-----KIQLFPLAYPIII-------------DLFGNLFWNEK 243 FK + P N ++ + + I D N + Sbjct: 924 PKFKADVDSPDINLGHNIDVTAPNLNVDLPKGKIKGPDLKTPDLDMNAPDFDINAPSGKM 983 Query: 244 Q-PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST--- 299 + P + G K+ + +L+ K ++ G D ++ + + +S + + Sbjct: 984 KLPKFGLSGKPKGPDFKINSPKLNLKSPKIKGGIDTPDMDMTLPQADFKSPNLDLKSPDI 1043 Query: 300 ---DEDNKTKVSQDEENLLNFS-ENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353 K +++ + LN S G D+N D N + DI Sbjct: 1044 DLNGPSGKLNMAKPKMPSLNLSGLKGPHMNADVNHPDLNLTASTPKLNAGMSSPDIDI 1101 >gi|167031631|ref|YP_001666862.1| alpha-2-macroglobulin domain-containing protein [Pseudomonas putida GB-1] gi|166858119|gb|ABY96526.1| alpha-2-macroglobulin domain protein [Pseudomonas putida GB-1] Length = 1632 Score = 39.5 bits (90), Expect = 0.89, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 84/312 (26%), Gaps = 32/312 (10%) Query: 68 DIRIDQKEDGSFESKIEGLSMRA---EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124 D+++D + I L +R + + V + +D+ +S + Sbjct: 790 DVQLDNA-WARHDLYISALVIRPGERKANATPKRAVGVLHLPLDRAERKLAVSLQ----- 843 Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ-------ISARFLNII 177 K V ++ + G + + LN+ ++ F Sbjct: 844 APEKMRPKQPLTVKVKAAN-ADGSVPKQVHVLLSAVDVGILNITDFKTPDPFASLFGRKA 902 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 I G +I G G + K ++ I + P+ +D G Sbjct: 903 YGADQLDIYGQLIEAGQGRLASLAFGGDAAMAKGGKRPNTTVTIVAQ-QSLPVTLDDKGE 961 Query: 238 LFWNEKQPIYSGVFSV-------------AGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 P ++G + G L R + + Sbjct: 962 GQATVDIPDFNGELRLMAQAWTEEHFGMAEGKTVVAAPLIAELSAPRFLAGGDRTSLALD 1021 Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFS-ENGAESMHDLNETDFFEEEEKKNKN 343 ++ ++ N D + ++ + +N + + M + + + + Sbjct: 1022 LANLSGRAQQLNVEITIDGQLSLAANAVQSVNLTEGQRSTLMIPVQAQGGLGQGKVHVRV 1081 Query: 344 DDLKKDDIQYSV 355 L+ + + Sbjct: 1082 TGLQLPNEPATA 1093 >gi|21233019|ref|NP_638936.1| hypothetical protein XCC3590 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766891|ref|YP_241653.1| hypothetical protein XC_0552 [Xanthomonas campestris pv. campestris str. 8004] gi|21114866|gb|AAM42860.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572223|gb|AAY47633.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 815 Score = 39.5 bits (90), Expect = 0.89, Method: Composition-based stats. Identities = 31/283 (10%), Positives = 75/283 (26%), Gaps = 34/283 (12%) Query: 31 DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE----------DGSFE 80 F Q + +++ + G ++ F + I + G+ Sbjct: 225 QFDRIVAEQVQALTLRQLQIAGDGQLQFGLFKQLRGGPIEVFPSRAVFEHATLHWAGTEL 284 Query: 81 SKIEGLSMRAEF----------LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 + L M A L +L + + D L ++G + R Sbjct: 285 LRNGQLRMEASIARHTAAQARGLAVLQLTDALIGVRGDTAALEVTRDAQGKTRLKTRAGQ 344 Query: 131 MDMIHNVILEKIHVKGGR-IKII----DQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 + + ++ G ++ D L +L Q+ + + Sbjct: 345 GRADGELRWARGELQPGSHLQWRTPLHDGTRTPNALLGELAAQLQVDQDMRLRVSMPEPA 404 Query: 186 KGSVIAEGTGNFDNKRSAFKITAN-FPAKNKAISLKIQLFPLAYPI-------IIDLFGN 237 + + +R + N P + + QL L++ + L G+ Sbjct: 405 DAGLTLDADLRVQGRRLPLQAPRNLLPRTSGHARMHWQLASLSWIPALFPGVDWLTLEGD 464 Query: 238 LFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKIS 279 + I G + + + + + + G Sbjct: 465 GLVDADLRIVRGQLAAGSRLQVPRVTARVGVMEHAIEGQASAD 507 >gi|153004607|ref|YP_001378932.1| hypothetical protein Anae109_1745 [Anaeromyxobacter sp. Fw109-5] gi|152028180|gb|ABS25948.1| conserved hypothetical protein [Anaeromyxobacter sp. Fw109-5] Length = 384 Score = 39.5 bits (90), Expect = 0.95, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 71/213 (33%), Gaps = 23/213 (10%) Query: 70 RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS-----KGVSNW 124 ++ + + ++E F LL G + + ++ P L + +GV Sbjct: 69 KLGPEGEALPYFQVERARFGLYFKELLGGHVVAA-VDLEAPKLTLVSAKAPSREQGVEEA 127 Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184 + ++ + +L+++ VK G + +D+ + +L L L + + Sbjct: 128 PEVGRGLEELTPFLLDRLQVKDGELLWVDESEPEK---PELWLHRLEGTLENFATRKALA 184 Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 + G ++ A+S+ PLA + G L + Sbjct: 185 KNEPTVLAARGVLQ--------------RSGAVSVFATADPLAKKLTFAGQGRLEGLKLA 230 Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277 + + V S AG L++S + G Sbjct: 231 ELATLVGSKAGIAPDRGELDMSVRFRAEDGRIS 263 >gi|330994675|ref|ZP_08318598.1| hypothetical protein SXCC_04563 [Gluconacetobacter sp. SXCC-1] gi|329758316|gb|EGG74837.1| hypothetical protein SXCC_04563 [Gluconacetobacter sp. SXCC-1] Length = 1382 Score = 39.1 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 29/254 (11%), Positives = 75/254 (29%), Gaps = 13/254 (5%) Query: 7 IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66 + LG +V V V + + + ER+ + G + + G + P ++ Sbjct: 3 LALGIPAGLVAVALGMVLVVANTGAGQRAIERRLPGLTGGSVHLSG-LGGR-FPD-ALRV 59 Query: 67 KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126 + +D I+GL + L LL + ++ + + + + Sbjct: 60 AHLELDDYRGA--WLSIDGLQLDWSPLRLLGRRAVIGNLSMTRLAIPRLSEEDPAHPAKK 117 Query: 127 RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186 + ++ ++ V RI++ +V + L S + + + Sbjct: 118 TQDQATGSIHMGIDIRAVHVARIEVG-AALARVPAVFRLEGHASLADIAPVLDHFSVATL 176 Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-------PIIIDLFGNLF 239 ++ + A+ L+ + P + L +L Sbjct: 177 PPANIALDLTRLDRPGTLALGTRLERGRVALDLRAHEGADGFVSTLSRMPALAPLDLSLS 236 Query: 240 WNEKQPIYSGVFSV 253 + V ++ Sbjct: 237 LAGPRDDTQLVLAL 250 >gi|209967164|ref|YP_002300079.1| hypothetical protein RC1_3925 [Rhodospirillum centenum SW] gi|209960630|gb|ACJ01267.1| conserved hypothetical protein [Rhodospirillum centenum SW] Length = 1488 Score = 39.1 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 31/286 (10%), Positives = 79/286 (27%), Gaps = 13/286 (4%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR L +G L +V++ +++ RE Q + I+ Sbjct: 5 LRWTLWIVGTLLGLVVLAVAGALVWLSTPGGRETVLAQVE-----PLVPGLEIEGAEGGL 59 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + + + +E +EG + L LL+G ++V + + + S Sbjct: 60 FDLGVARLTLADREG--VWLTVEGARLDWSPLDLLTGTVQVDALTAGRVAVARAPVSDPD 117 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + V ++++ ++ + + + A L L Sbjct: 118 PEPETDAGPFSLPVAVDVDRLALERVELGAALLGGTPALLTAGGQGSLPAGRLGGSVDLR 177 Query: 182 IDSI---KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 ++ I G+ T + PA + ++ P P+ + + G Sbjct: 178 VERIDESPGTAALRAT-YVPGTSLDLDLRLAEPA--GGVLARLLEIPGRPPVDVAVTGEG 234 Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284 + + + + + + + Sbjct: 235 PLTDWTGRLEASAGDVASATGEARIRPTGDAFAFGLDLSGNVAALA 280 >gi|157803911|ref|YP_001492460.1| hypothetical protein A1E_03720 [Rickettsia canadensis str. McKiel] gi|157785174|gb|ABV73675.1| hypothetical protein A1E_03720 [Rickettsia canadensis str. McKiel] Length = 876 Score = 39.1 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 59/418 (14%), Positives = 131/418 (31%), Gaps = 57/418 (13%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M++++ + FS++L F+ F+++ T +G IK++ P Sbjct: 1 MIKKITASIIICFSLLLFIIFSALSFVNYNS----VTNNLTSHLGIAKENIRKIKMNKFP 56 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH-------LN 113 P + + IR + +E + + L++ ++ + I LN Sbjct: 57 LPYLIIELIR------EEGKLDLEQIKIYFSLWSLITFNPKINKIDILDAKFYSNSNLLN 110 Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG--------------------------- 146 Y + + N+F+ K ++ L I+ + Sbjct: 111 IYNHEELIKNFFKYKLQDINLNVTNLSIINKQDYSILNFNNCILKKENALSSFKTTSNYI 170 Query: 147 ----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202 G I D + + + + L+ S + + + + Sbjct: 171 GKISGSINKHDDTVAFSLNIDNNDYGFKLSQIYKDFKLTSGSGEYQLKNLASVIYSILP- 229 Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262 K+ N +N+A+++K + I + ++ +G +A + N Sbjct: 230 DLKLLFNKFNQNEAVNVKFNIANNEDEIELK---DIVIASSFITGNGFVHIAKNDHITTN 286 Query: 263 LELSAKKSRLSGNFKIS-DGNVRISRYKLQSILPNSSTDEDNKT-KVSQDEENLLN---F 317 ++L K LS + G R ++ I + D K ++ L F Sbjct: 287 VKLDFHKIDLSSLISPNAGGTFHTDRSNIRFIFADKLLKTDVKINEIILSNNEALEKIVF 346 Query: 318 SENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSG 375 S N + +NE + + K + S+ + +D + N G Sbjct: 347 SSNLLKGTLKINEFSGNIKSGGEFKLTGSVTQNAVRSMFDGQLYLQHNDINSLLNILG 404 >gi|145600819|ref|YP_001164895.1| hypothetical protein YPDSF_3572 [Yersinia pestis Pestoides F] gi|145212515|gb|ABP41922.1| hypothetical protein YPDSF_3572 [Yersinia pestis Pestoides F] Length = 1298 Score = 39.1 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 105/344 (30%), Gaps = 45/344 (13%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL DFR + Q I G+++ + G ++ I + + Sbjct: 255 ALFAKPLLPALPDFRLPLDLQIEEISGQQLRLTGDNEVLISSLLLQASTQDQRITLDTLE 314 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN----------FYLSSKG 120 I + G L+ + +++ + + + ++ L L+ G Sbjct: 315 IKSPQGGLSAQGQATLADKWPLDLVVNSALNIDSLKGEKVKLTVGGALREELKVTLNLSG 374 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + T + L + ++ +++ + Y +++L ++++ + + + Sbjct: 375 PVSAQLETETSLAKAGLPL-SLTLQSKQLRWP-LTGEPQYQMNNLRMRLNGQATDYALSI 432 Query: 181 SIDSIKGS-----VIAEGTGN---FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 D EG GN F+ R + + + + + Sbjct: 433 RSDIKGTDLPPAVFTLEGKGNVEQFNLTRLRLAALQGHTDLTGVVDWRQAISWNSVLTLS 492 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281 + W E G G L L+ + K++R++ ++ G Sbjct: 493 GINTAKQWPEWPAKLEGKIVTRGSIHGGSWQLQVPELVLDGNVKQNRVTARGSLTGNAAG 552 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 I L + D + ++ LL+ + + + Sbjct: 553 QWHIPGINLALGR--NKLDMKGE----LNDNWLLDANVDAPQLD 590 >gi|51594805|ref|YP_068996.1| hypothetical protein YPTB0453 [Yersinia pseudotuberculosis IP 32953] gi|51588087|emb|CAH19693.1| putative exported protein [Yersinia pseudotuberculosis IP 32953] Length = 1312 Score = 39.1 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 105/344 (30%), Gaps = 45/344 (13%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL DFR + Q I G+++ + G ++ I + + Sbjct: 269 ALFAKPLLPALPDFRLPLDLQIEEISGQQLRLTGDNEVLISSLLLQASTQDQRITLDTLE 328 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN----------FYLSSKG 120 I + G L+ + +++ + + + ++ L L+ G Sbjct: 329 IKSPQGGLSAQGQATLADKWPLDLVVNSALNIDSLKGEKVKLTVGGALREELKVTLNLSG 388 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + T + L + ++ +++ + Y +++L ++++ + + + Sbjct: 389 PVSAQLETETSLAKAGLPL-SLTLQSKQLRWP-LTGEPQYQMNNLRMRLNGQATDYALSI 446 Query: 181 SIDSIKGS-----VIAEGTGN---FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 D EG GN F+ R + + + + + Sbjct: 447 RSDIKGTDLPPAVFTLEGKGNVEQFNLTRLRLAALQGHTDLTGVVDWRQAISWNSVLTLS 506 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281 + W E G G L L+ + K++R++ ++ G Sbjct: 507 GINTAKQWPEWPAKLEGKIVTRGSIHGGSWQLQVPELVLDGNVKQNRVTARGSLTGNAAG 566 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 I L + D + ++ LL+ + + + Sbjct: 567 QWHIPGINLALGR--NKLDMKGE----LNDNWLLDANVDAPQLD 604 >gi|153950336|ref|YP_001402578.1| hypothetical protein YpsIP31758_3624 [Yersinia pseudotuberculosis IP 31758] gi|152961831|gb|ABS49292.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP 31758] Length = 1312 Score = 39.1 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 105/344 (30%), Gaps = 45/344 (13%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL DFR + Q I G+++ + G ++ I + + Sbjct: 269 ALFAKPLLPALPDFRLPLDLQIEEISGQQLRLTGDNEVLISSLLLQASTQDQRITLDTLE 328 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN----------FYLSSKG 120 I + G L+ + +++ + + + ++ L L+ G Sbjct: 329 IKSPQGGLSAQGQATLADKWPLDLVVNSALNIDSLKGEKVKLTVGGALREELKVTLNLSG 388 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + T + L + ++ +++ + Y +++L ++++ + + + Sbjct: 389 PVSAQLETETSLAKAGLPL-SLTLQSKQLRWP-LTGEPQYQMNNLRMRLNGQATDYALSI 446 Query: 181 SIDSIKGS-----VIAEGTGN---FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 D EG GN F+ R + + + + + Sbjct: 447 RSDIKGTDLPPAVFTLEGKGNVEQFNLTRLRLAALQGHTDLTGVVDWRQAISWNSVLTLS 506 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281 + W E G G L L+ + K++R++ ++ G Sbjct: 507 GINTAKQWPEWPAKLEGKIVTRGSIHGGSWQLQVPELVLDGNVKQNRVTARGSLTGNAAG 566 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 I L + D + ++ LL+ + + + Sbjct: 567 QWHIPGINLALGR--NKLDMKGE----LNDNWLLDANVDAPQLD 604 >gi|186893814|ref|YP_001870926.1| hypothetical protein YPTS_0483 [Yersinia pseudotuberculosis PB1/+] gi|186696840|gb|ACC87469.1| protein of unknown function DUF490 [Yersinia pseudotuberculosis PB1/+] Length = 1312 Score = 39.1 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 105/344 (30%), Gaps = 45/344 (13%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL DFR + Q I G+++ + G ++ I + + Sbjct: 269 ALFAKPLLPALPDFRLPLDLQIEEISGQQLRLTGDNEVLISSLLLQASTQDQRITLDTLE 328 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN----------FYLSSKG 120 I + G L+ + +++ + + + ++ L L+ G Sbjct: 329 IKSPQGGLSAQGQATLADKWPLDLVVNSALNIDSLKGEKVKLTVGGALREELKVTLNLSG 388 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + T + L + ++ +++ + Y +++L ++++ + + + Sbjct: 389 PVSAQLETETSLAKAGLPL-SLTLQSKQLRWP-LTGEPQYQMNNLRMRLNGQATDYALSI 446 Query: 181 SIDSIKGS-----VIAEGTGN---FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 D EG GN F+ R + + + + + Sbjct: 447 RSDIKGTDLPPAVFTLEGKGNVEQFNLTRLRLAALQGHTDLTGVVDWRQAISWNSVLTLS 506 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281 + W E G G L L+ + K++R++ ++ G Sbjct: 507 GINTAKQWPEWPAKLEGKIVTRGSIHGGSWQLQVPELVLDGNVKQNRVTARGSLTGNAAG 566 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 I L + D + ++ LL+ + + + Sbjct: 567 QWHIPGINLALGR--NKLDMKGE----LNDNWLLDANVDAPQLD 604 >gi|170025984|ref|YP_001722489.1| hypothetical protein YPK_3769 [Yersinia pseudotuberculosis YPIII] gi|169752518|gb|ACA70036.1| protein of unknown function DUF490 [Yersinia pseudotuberculosis YPIII] Length = 1291 Score = 39.1 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 105/344 (30%), Gaps = 45/344 (13%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL DFR + Q I G+++ + G ++ I + + Sbjct: 248 ALFAKPLLPALPDFRLPLDLQIEEISGQQLRLTGDNEVLISSLLLQASTQDQRITLDTLE 307 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN----------FYLSSKG 120 I + G L+ + +++ + + + ++ L L+ G Sbjct: 308 IKSPQGGLSAQGQATLADKWPLDLVVNSALNIDSLKGEKVKLTVGGALREELKVTLNLSG 367 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + T + L + ++ +++ + Y +++L ++++ + + + Sbjct: 368 PVSAQLETETSLAKAGLPL-SLTLQSKQLRWP-LTGEPQYQMNNLRMRLNGQATDYALSI 425 Query: 181 SIDSIKGS-----VIAEGTGN---FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 D EG GN F+ R + + + + + Sbjct: 426 RSDIKGTDLPPAVFTLEGKGNVEQFNLTRLRLAALQGHTDLTGVVDWRQAISWNSVLTLS 485 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281 + W E G G L L+ + K++R++ ++ G Sbjct: 486 GINTAKQWPEWPAKLEGKIVTRGSIHGGSWQLQVPELVLDGNVKQNRVTARGSLTGNAAG 545 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 I L + D + ++ LL+ + + + Sbjct: 546 QWHIPGINLALGR--NKLDMKGE----LNDNWLLDANVDAPQLD 583 >gi|157368707|ref|YP_001476696.1| hypothetical protein Spro_0460 [Serratia proteamaculans 568] gi|157320471|gb|ABV39568.1| protein of unknown function DUF490 [Serratia proteamaculans 568] Length = 1256 Score = 39.1 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 42/345 (12%), Positives = 100/345 (28%), Gaps = 46/345 (13%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71 F PL D D R + I G+++ + G + I + + + Sbjct: 213 LFAKPLLPDLPDIRLPLDITVKEISGEQLRLTGDTDVLITSLLLQASTLDQHIQLDNFDV 272 Query: 72 DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF----------YLSSKGV 121 + L+ + + + + + ++ LN L+ G Sbjct: 273 KSPQGTLSAQGQATLTGSWPVEMVANSTLNIDPLKGEKVKLNIGGGLREELKVALNLSGP 332 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 T + L + ++ ++K + Y ++D L+ + + + Sbjct: 333 VGAQLDLQTQLAEAGLPLA-LTLQSKQLKWP-LSGESQYQINDFRLRFNGKATDYALSTR 390 Query: 182 IDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 + + +G GN + + A +L +++ + L G Sbjct: 391 ANIKGQDLPPAVLTLDGKGNVEQFKLDRLRLAALQGNTDLTALVDWSKAISWNSQLTLSG 450 Query: 237 ---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---GN 282 W E G + G +L L+ + K+++++ +S G Sbjct: 451 INTAKQWPEWPAKLDGKITTRGSLHGGSWQLQVPVLQLDGNVKQNKVTARGTLSGNAAGQ 510 Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 +I L + + + +E N + D Sbjct: 511 WKIPGIDLTLGR--NQLNVKGQL-----DEKSWNLDADIDAPRLD 548 >gi|281421311|ref|ZP_06252310.1| conserved hypothetical protein [Prevotella copri DSM 18205] gi|281404846|gb|EFB35526.1| conserved hypothetical protein [Prevotella copri DSM 18205] Length = 1588 Score = 39.1 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 40/404 (9%), Positives = 110/404 (27%), Gaps = 47/404 (11%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDW----TDFREDFERQATLIVGKKIAVKGGIKI 56 +++R G LV + + + + A+ G I+VK ++ Sbjct: 2 LMKRYAKWAGITVLTPLVLILLLSILLYLPPVQNWAVKQVAAYASESTGMDISVK---QV 58 Query: 57 HILPFPSVFFKDIRIDQK-------------EDGSFESKIEGLSMRAEFLPLLSGEIRVF 103 ++ + + +++ Q + I+ + + + LPL ++ V Sbjct: 59 RLVFPLKLGVEGVKVLQPIDSLKNSPNLALRNKRDTVADIQKIVVDVQLLPLFESQVMVD 118 Query: 104 DMYIDQPHLNFY------LSSKGVSNWFQRKSTMD-MIHNVILEKIHVKGGRIKIIDQES 156 ++ Q +N V N + +D V + + R+ + ++ Sbjct: 119 ELNFTQMKVNTTNFIHEARIKGNVGNLRLKAHGIDLGKEKVRVNHALLADARLSVELSDT 178 Query: 157 DQVYFLSDLNL------QISARFLNIISPLSIDSIKGSVIAE---GTGNFDNKRSAFKIT 207 N ++ + + + + D+++ + + + Sbjct: 179 VPPDTTPSTNFWKVNIEKLKLKNTDFVLHMPGDTLQVNAYFGDAVAQTTYLDLYKGLYQI 238 Query: 208 ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY-----SGVFSVAGDFSKLLN 262 + K ++ + + K + + K Sbjct: 239 GHLDWKKGKVNYDQNYIRPVSGMDFNHIALAALTLKADSFYYCDSKIDVKIREAQFKE-- 296 Query: 263 LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN-LLNFSENG 321 + + +L G F + +++ L++ D + + L G Sbjct: 297 -KSGLQVDQLYGRFVMDSVKLQLPDICLRTPYSQLQATVDMDMNAFDEVKPGKLMAQLKG 355 Query: 322 AESMHDLNETDFFEEEEKKNKNDDLKKDDI--QYSVNKKEEKDN 363 A DL K I + N ++ + Sbjct: 356 ALGRSDLFLFAGDAFPSAMKKKWPFYPMKIEGSFKGNMQQASFS 399 >gi|289665394|ref|ZP_06486975.1| hypothetical protein XcampvN_20572 [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 811 Score = 39.1 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 35/360 (9%), Positives = 91/360 (25%), Gaps = 58/360 (16%) Query: 36 FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95 + +++ ++G ++ + F + + I + E +R + Sbjct: 226 VADHVQDLALRQLHIEGDGQLQLGLFKQLRGGPMEI-----FPSRAVFESARVRWGEHEV 280 Query: 96 LSGEIRVFDMYI-------------------------DQPHLNFYLSSKGVSNWFQRKST 130 L + I D L+ +++G R Sbjct: 281 LRNGQLRIEASIARHSPDQASGRAVLQLTDALIALHGDTAALDVTRNAQGRHTVATRAGK 340 Query: 131 MDMIHNVI-LEKIHVKGGRIKII----DQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 + + G +++ D L +L Q+ + + Sbjct: 341 GRADGELRWIRGALQSGSQLRWRAPLHDSTRAPAALLGELTAQLQVDQNMRVQVRMPEPA 400 Query: 186 KGSVIAEGTGNFDNKRSAF-KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 + + ++ F + + P + L QL L + Sbjct: 401 DAGLTLDADLRVQGRQLPFQSMRSLLPRTSGHARLHWQLSSLRW-----------IPTLF 449 Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 P ++ GD +L++ + ++ ++ +I +S D Sbjct: 450 PDVD-WLTLEGDGLVDADLQIDRGQLAAGSRLQVPHVQAQVGVM-GHAITGQASADLRVD 507 Query: 305 TKVSQDEENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDN 363 + +L H D F + + + D+Q + + Sbjct: 508 ADANGQLLPVLALKMQQFSIAHSDATTRPFVQGSDLRL--------DLQTRADARNLSSL 559 >gi|189485648|ref|YP_001956589.1| hypothetical protein TGRD_645 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287607|dbj|BAG14128.1| hypothetical protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 1531 Score = 39.1 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 36/292 (12%), Positives = 92/292 (31%), Gaps = 27/292 (9%) Query: 32 FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAE 91 F ++ + G ++ +ILPF S+ F ++ D I+ ++ + Sbjct: 29 FVPFIQKYISDKTGYEVKFD---NFYILPF-SITFANV------DMDNMIAIQKITFKLS 78 Query: 92 FLPLLSGEIRV----FDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGG 147 + + I + ++ + K + ++S + + I V Sbjct: 79 PVKFFVHITAPLNCISQINISKLEISLNENHKDKNVSSDKRSVDLELPKSEIA-IFVDEA 137 Query: 148 RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207 + ++D L ++ I I I ++ V + R+ I Sbjct: 138 VV-----KNDNSRLLKIIDADILINHDKITLESVICALGIPVKVSSRID----RAKGNIF 188 Query: 208 ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA 267 A + + L + L ++ IYSG F + + + Sbjct: 189 NTSSAFTAKNKIDMLLKSTGTIDLSSLSITQNITVEKLIYSG-FKLIAPSGSFSKIRDAY 247 Query: 268 KKSRLS--GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317 K + + G F+ + + + K + + ++ ++ E+ ++ Sbjct: 248 KINLVGGFGKFEFNSFSGSATEAKPEIDISKTNKSMSGDISLNFKEQYSISV 299 >gi|157149604|ref|YP_001456653.1| hypothetical protein CCC13826_0632 [Campylobacter concisus 13826] gi|112800218|gb|EAT97562.1| hypothetical protein CCC13826_0632 [Campylobacter concisus 13826] Length = 309 Score = 39.1 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 21/174 (12%), Positives = 47/174 (27%), Gaps = 3/174 (1%) Query: 51 KGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110 KG + + + + SV +D+ G + + + S + ID P Sbjct: 137 KGNLDVVLGDYESVTARDLEFIAGLTGPSAITNKAVKAAWDRFGKKSSGVTSDVTKIDNP 196 Query: 111 HLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + +N + + N+ + + K G + + D + Sbjct: 197 AIEVVKDKDSAANVALYEKYKKELSNLEISSLFNKDGTLTKEAILKREQIIAGD---NLG 253 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 L +IK + N + N + K ++ Sbjct: 254 NIELIKELTKDGSNIKDWAKFKIDANKAEIHFYYNEKNNRAYYDMDYKTKFKVG 307 >gi|91200045|emb|CAJ73087.1| unknown protein [Candidatus Kuenenia stuttgartiensis] Length = 233 Score = 39.1 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 30/93 (32%), Gaps = 4/93 (4%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED--GSFESKI 83 + E A + + + + + I ++ K++ +D E K+ Sbjct: 90 LFGDRALKVGIEAGAERSMQVGVHLD-DVSLSIFGG-TLNLKNLIVDNPEGYQHPNVLKV 147 Query: 84 EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + LLS + V + +D +L Sbjct: 148 GNTYISVNIRTLLSDTVEVKKIQLDDVYLTIEQ 180 >gi|326402809|ref|YP_004282890.1| hypothetical protein ACMV_06610 [Acidiphilium multivorum AIU301] gi|325049670|dbj|BAJ80008.1| hypothetical protein ACMV_06610 [Acidiphilium multivorum AIU301] Length = 391 Score = 39.1 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 28/256 (10%), Positives = 77/256 (30%), Gaps = 21/256 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV---GKKIAVKGGIKIHI 58 +RR++ L + + +G + + QA + G ++ G + Sbjct: 1 MRRLVRFLSLVVVLAALGWLGLWWY--AESRLALAVDQAAARLHAAGWTVS-HGAVTRGT 57 Query: 59 LPFPS-VFFKDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVF---DMYID-QPH 111 PF + V D+R+ + + +I + + L+ ++ M ++ P Sbjct: 58 SPFVADVRVADLRLTPPVADGPAPTLEIPAVDLVVHPAAPLTLDLGFATVWRMALEGGPS 117 Query: 112 LNFY---LSSKGVSNWFQRKSTMDMI-----HNVILEKIHVKGGRIKIIDQESDQVYFLS 163 +++ + + ++ + ++ + Sbjct: 118 FTLRFGSIAADDRFDLADLLHHAPDPLRAGAFHATDLRVDSENTNFTLVSIAAIDASGTR 177 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 + + + + L ++ + G F K +A + A+ ++ L Sbjct: 178 NPDAGPDSMAATLHESLRGLALSPLFVTLGNLPFGGKLTALSVDLALSGPAAALPARLTL 237 Query: 224 FPLAYPIIIDLFGNLF 239 P A + NL Sbjct: 238 PPGARWLAPGAAANLP 253 >gi|167854541|ref|ZP_02477322.1| hypothetical protein HPS_02144 [Haemophilus parasuis 29755] gi|167854296|gb|EDS25529.1| hypothetical protein HPS_02144 [Haemophilus parasuis 29755] Length = 905 Score = 39.1 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 108/325 (33%), Gaps = 34/325 (10%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIA----VKGGIKI 56 MLRR L+ +G + ++++ G + + G KI ++ ++ Sbjct: 1 MLRRSLLIIGAVLAILMAGGA---SLLSGSQLASAINLVLP--TGWKIETPYGIEPHLEK 55 Query: 57 HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 ILP +++ E LS++ + IR+ ID ++ + Sbjct: 56 AILPQFTLY---------YQHCPIISAESLSVQW----IDERSIRLNQATIDYACVSLFP 102 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176 S+ S ++ ++ + I +K + + ++ L L LQ + Sbjct: 103 KSE-KSQTDPTETIKTILALLPEGNIEIK--SLAWKNLPNEMHERLKGL-LQSPSEIKFA 158 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI-SLKIQLFPLAYPIIIDLF 235 + + NF N++ + +++ + + +L QL + L Sbjct: 159 FFQQKLTAYIKQQAVTFDANFANQQLSAQLSYQPNKDEQHLATLSAQLDEHFLALPQQLS 218 Query: 236 GNLFWNEKQPIYS-GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 N WN + + + + +L GN++++ +++ L Sbjct: 219 LNYQWNLPKTLIAEPSLQQGHSTLSWHKQDQ-----QLHGNWQLNSAITPENQFNLPFHF 273 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSE 319 S + K K+ N + Sbjct: 274 DTQSLTIE-KGKIDWQLSNDFPLNA 297 >gi|114655123|ref|XP_001144198.1| PREDICTED: AHNAK nucleoprotein 2 [Pan troglodytes] Length = 2600 Score = 38.7 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 33/297 (11%), Positives = 89/297 (29%), Gaps = 29/297 (9%) Query: 87 SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG 146 + L + +++ + + P L+ V S + ++ K + Sbjct: 700 KVEMPSLKMPKVDLKGPQIDVKGPKLDLKGPKAEVRVPDVEVSLPSVEVDIQAPKAKLDA 759 Query: 147 GRIKIIDQESDQVYFLSDLNLQISAR--------FLNIISPLSIDSIKGSVIAEGTG-NF 197 GR++ +D+ D ++ S+D V A+ + + Sbjct: 760 GRLEGDLSLADKDVTAKDSKFKMPKFKMPSFRVSAPGKSMEASVDVSAPKVEADVSLPST 819 Query: 198 DNKRSAFKITANFPAKNKAI---SLKIQLFPLAYPIIIDLFGNL-----------FWNEK 243 ++ P+ + + + ++L P L G+L + K Sbjct: 820 QGDLKTTDLSIQPPSADLKVQAGQVDVKLLEGHVPEEAGLKGHLPKMQTPSLKMPKVDLK 879 Query: 244 QPIYSG---VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300 P + ++ ++ + + + + +R + + + Sbjct: 880 GPEIDIKGPKLDLKDPKVEVTAPDVEVSLPSVEVDVEAPGAKLDGARLEGDLSVADKDVT 939 Query: 301 E-DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND--DLKKDDIQYS 354 D+K K+ + + S G ++ ++ E + + DLK D+ Sbjct: 940 AKDSKFKMPKFKMPSFGVSAPGKSIEASVDVSELKAEADVSLPSMQGDLKTTDLSIQ 996 >gi|313676398|ref|YP_004054394.1| hypothetical protein Ftrac_2307 [Marivirga tractuosa DSM 4126] gi|312943096|gb|ADR22286.1| protein of unknown function DUF490 [Marivirga tractuosa DSM 4126] Length = 1638 Score = 38.7 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 48/358 (13%), Positives = 119/358 (33%), Gaps = 24/358 (6%) Query: 35 DFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLP 94 + + K + + I L + + + + + P Sbjct: 30 YATKFVSERTQTKFEID-RLYITFLGAAQIE---GLYAEDSNQDTLIYANSILADVAWKP 85 Query: 95 LLSGEIRVFDMYIDQPHLNFYLSS-KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIID 153 LL G + V ++ ++ + +S N+ + EK I Sbjct: 86 LLDGNVDVKNLELEGITGKVHNNSVDSSYNFQFLIDAFANADSTSTEKETDTTSSTTI-- 143 Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIK---GSVIAEGTGNFDNKRSAFKITANF 210 + + L +++L + + + L + ++ + + + +FD + K Sbjct: 144 --NVRHILLENIDLNFQDISVEMKTYLKLGELELSLNTFNLD-SLHFDVEEFVLKNVKAN 200 Query: 211 PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270 ++ A + + I++ L NE Y +F S + L++ K Sbjct: 201 YSQGLAFPPSEEDTTESTLPKINVQ-KLSLNEIDLEYETLFDRLQMSSLINLLDIRNAKV 259 Query: 271 RL-SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH--- 326 L ++ + +IS ++++ + + ST E+N S E N Sbjct: 260 DLAKNEIELDKFDNKISHFRMRLPISSDSTQEENDESPSPFEFPDYKIKLNTFNFNLADL 319 Query: 327 ------DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378 +NE + F E+ + ++ L + QY + ++ S ++ ++F ++ Sbjct: 320 DIKSEGKINEIEGFNPEDMQFQDIKLNLVNAQYLAEDLDIENFSFSAKDSKSFELKEL 377 >gi|117925158|ref|YP_865775.1| membrane protein-like protein [Magnetococcus sp. MC-1] gi|117608914|gb|ABK44369.1| membrane protein-like protein [Magnetococcus sp. MC-1] Length = 1144 Score = 38.7 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 38/345 (11%), Positives = 103/345 (29%), Gaps = 33/345 (9%) Query: 1 MLRRVL--IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58 ++R + + V + + +D D R+ E + T +G+ +++ + + Sbjct: 5 IMRWCIALLLGLPALLVAVALLWFAIRPLDIIDLRKLSEIELTERLGQPVSIT---TMQL 61 Query: 59 LPF---PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLP---LLSGEIRVFDMYIDQPHL 112 +P + + + + ++ +I +R + LL G I + + ++ + Sbjct: 62 VPSSALLDLRLQGVTLFDQQRSRPLVQIGETRIRVKTWNLSTLLQGRIPLEIVILNGNAV 121 Query: 113 NFYLSSK------GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDL 165 + G + + + + ++ Q + L L Sbjct: 122 AINKGTDREWFIAGQAVSVWQAKFQQPLPRPAVHQVD----TGSWQQQLAGYAAQLLEHL 177 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ--L 223 + + L + S ++ A G N + + + + Sbjct: 178 QITTVRLGKLSLDVLQMPSAGSTIQAVGKLNLIDAQLHNRSGETPIQWAMHGDFTPNWGV 237 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF-----SKLLNLELSAKKSRLSGNFKI 278 P+ L G L + +G + L+ + + G F++ Sbjct: 238 EQGDAPVTYTLEGALQ-QRGRWHLAGKVAHLRPDRWTNLLGKAGASLAGLQFPMQGEFRL 296 Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323 G+ + + + +L + D + + N S G Sbjct: 297 HGGDGEPWKSRWKVVLGSGVWDTHGLFRW---PIPISNLSAEGQA 338 >gi|238756429|ref|ZP_04617738.1| hypothetical protein yruck0001_33840 [Yersinia ruckeri ATCC 29473] gi|238705359|gb|EEP97767.1| hypothetical protein yruck0001_33840 [Yersinia ruckeri ATCC 29473] Length = 1262 Score = 38.7 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 54/410 (13%), Positives = 121/410 (29%), Gaps = 63/410 (15%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71 F PL DFR + Q + I +++ + G ++ I V + + I Sbjct: 220 LFAKPLLPALPDFRLPIDLQLSEINAQQLRLTGDSEVLITSLILKASTEEQHVKLETLEI 279 Query: 72 DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY---LSS---------- 118 + G S L+ + +++ I + + ++ LN Sbjct: 280 KSPQGGLTASGKATLADKWPLELVVNSTINIEPLKGERIKLNLAGGLRDQLTVGLNLSGP 339 Query: 119 -KGVSNWFQRKSTMDMIHNVILEKIHVK-----GGRIKIIDQESDQVYFLSDLNLQISAR 172 + + + L+ ++ + +I + ++ +D L I A Sbjct: 340 VSAQLEAQAELAKAGLPLALTLQSKQLRWPFTGDAQFQIDNFKTRLNGQATDYALSIRAD 399 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPII 231 P ++ +G GN + ++ N ++ + +++ + Sbjct: 400 VKGADIPPAV------FTFDGKGNLEQFTLT-RLRLAALQGNTDLTGVVDWSKAVSWNSV 452 Query: 232 IDLFG---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD 280 + L G W E G G L L+ + K++R++ ++ Sbjct: 453 LTLNGINTAKQWPEWPGKLDGKIVTRGSLHGGSWQLNVSELTLDGNVKQNRVTARGSLTG 512 Query: 281 ---GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEE 337 G I L + D +++ +L+ + + L Sbjct: 513 NAAGQWHIPGINLALGR--NQLDMKG----DLNDKWVLDVNVDAPRLDGALPGLAGVVRG 566 Query: 338 EKKNKN--------DDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379 K + DL D+Q+ + D + E G I Sbjct: 567 HLKLRGNLTAPQLLADLTATDLQWQALHIQRIKVDGDVRSAEQIQGQLAI 616 >gi|257468109|ref|ZP_05632205.1| hypothetical protein FulcA4_02157 [Fusobacterium ulcerans ATCC 49185] Length = 570 Score = 38.7 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 63/169 (37%), Gaps = 10/169 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++++ L + +++VG + I + E++ T I K+ + K+ PF Sbjct: 1 MKKIIMYLLAVIILIVVGVYAARNII----VKNILEKKLTEINKGKVDIG---KVEFSPF 53 Query: 62 P-SVFFKDIRI-DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + +DI Q+ ++ + + + ++ + + +I + Sbjct: 54 NKRIVVRDIEATSQRNSMKNFVTVKEFNADYDIY-ISDKKVLISEAHIINVDFLTDRKTD 112 Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168 G ++ V ++ K + I+ ++DLNL+ Sbjct: 113 GAIGIKEKTPLDASQVLVPDDEEKNKEVLVTEIENSYLDNMKINDLNLE 161 >gi|157368543|ref|YP_001476532.1| coagulation factor 5/8 type domain-containing protein [Serratia proteamaculans 568] gi|157320307|gb|ABV39404.1| coagulation factor 5/8 type domain protein [Serratia proteamaculans 568] Length = 1967 Score = 38.7 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 92/355 (25%), Gaps = 39/355 (10%) Query: 49 AVKGGIKIHILPFPSVFFKDIRIDQKEDGSF-----ESKIEGLSMRAEFLPLLSGEIRVF 103 A+ G + + ++ + K+ I G S+R + + + Sbjct: 286 ALDGDFSVSFWVKANAQYEGVIFSNKDWRVGGNIGWVIGISGKSLRWNWQGAYGRRLDMA 345 Query: 104 DMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ----- 158 D+ I + + S V + + + Sbjct: 346 DIPIADFKWHHVAIAHDRSRDAVFYLDGQEQSRVTIANSGHTNTHLDFNIGADGRGEYRL 405 Query: 159 ----VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214 + ++ N ISA+ + + +F++ + + + Sbjct: 406 ANTFLDRVNITNTIISAQQARQEYDEYYEKL-TPAPISLHYDFNDHLNDASVNGYDAVIH 464 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV----AGDFSKLLNLELSAKKS 270 A+ D F + E Q SG FS+ +S K Sbjct: 465 GKEEYVSGFANSAFLFNGDSFITIPNPELQNDLSGDFSLCFWIKAPTGNKEQTIISNKDW 524 Query: 271 RLSGNFKISDGNVRISRYKLQ-SILPNSSTDEDNKTKVSQDEENLLNFSENGAESM--HD 327 GN G + + D D+ + + HD Sbjct: 525 NSGGNPGWQLG-IHKNALSWNWKGDSAGRYDLA-------DDYPIYVADGRWHQITVSHD 576 Query: 328 -LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS--HDKENQENFSGDKMI 379 FF++ K + DI++S + D + D Q S + MI Sbjct: 577 RFGNACFFKDGVLKQQI------DIRFSGDTATALDIAVGADAMGQYRLSNETMI 625 >gi|237736783|ref|ZP_04567264.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] gi|229420645|gb|EEO35692.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] Length = 564 Score = 38.7 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 43/132 (32%), Gaps = 9/132 (6%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M +++ I +G L ++ F+ I ++ E + T I K+ + G + Sbjct: 1 MKKKIGIAVGILVVLLGGVYFSKDYII-----KKVLENKLTEINKGKVDI-GSVDFSPFS 54 Query: 61 FPSVFFKDIRIDQKEDG-SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + +DI I ++DG I + ++ V S Sbjct: 55 K-KIVIEDIDITSRKDGMKNFISIGKFETDYDIY-FKDKKVLVSRADFSDVKFMTPRDSD 112 Query: 120 GVSNWFQRKSTM 131 G + + + Sbjct: 113 GSTGYVVEEKND 124 >gi|159185292|ref|NP_355553.2| hypothetical protein Atu2616 [Agrobacterium tumefaciens str. C58] gi|159140551|gb|AAK88338.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 1386 Score = 38.7 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 44/382 (11%), Positives = 101/382 (26%), Gaps = 38/382 (9%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFER-QATLIVGKKIAVKGGIKIHILPFP 62 R+L LG+ +V LF+ +T Q + + I I P Sbjct: 6 RLLKWLGYAALCCVVLVLLAVLFVGFTPMGARIAANQISS-----LVSTPDQTIEISPPG 60 Query: 63 SVFFKDIRIDQ---KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS- 118 + +R+D + +++ +++ L LL+G + ++ Sbjct: 61 GLLTGRLRLDNVTLSDRQGPYARLNQIAVDWSPLSLLAGTFHADHVSAG--SIDVERQPL 118 Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 + + ++++ I + + + L+ +A+ +S Sbjct: 119 PAQQTTGKSSGGSSLPIEIVIDNFSFPD--ISLGQSLLGRAFDLTAEGNLKAAQDDMRLS 176 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238 + F + K+ A + + P + IDL G Sbjct: 177 LTAHRRNAVDAEVNADVAFLPNENVLKLKAEMKEPEGGLLATLLSLPGTPAVAIDLNGEG 236 Query: 239 FWNEKQPIYSGVFS-----------VAGDFSKLLNLELSAKKSRL----------SGNFK 277 + G + + GD + L +G K Sbjct: 237 PLSSWTGTLRGNVAGNAVVNVTGRHLLGDDGTRRIEIAGGGQPDLLLPPAFRQLFAGETK 296 Query: 278 ISDGNVRISRYKLQSILP---NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334 + + +++ + V + +N L + G D Sbjct: 297 LDANATLYPQGRIEIGSSTLETGALLLTASGTVDPNGQNDLAANLIGTAGPVDFRWPLGN 356 Query: 335 EEEEKKNKNDDLKKDDIQYSVN 356 E + DL + + Sbjct: 357 GEIQALINGLDLSLKGGADAAH 378 >gi|289669505|ref|ZP_06490580.1| hypothetical protein XcampmN_13663 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 813 Score = 38.7 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 34/360 (9%), Positives = 90/360 (25%), Gaps = 58/360 (16%) Query: 36 FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95 + +++ ++G ++ + F + + I + E +R + Sbjct: 228 VADHVQDLALRQLHIEGDGQLQLGLFKQLRGGPMEI-----FPSRAVFESARVRWGEHEV 282 Query: 96 LSGEIRVFDMYI-------------------------DQPHLNFYLSSKGVSNWFQRKST 130 L + I D L+ +++G R Sbjct: 283 LRNGQLRIEASIARHSPDQASGRAVLQLTDALIALHGDTAALDVTRNAQGRHTVATRAGK 342 Query: 131 MDMIHNVI-LEKIHVKGGRIKII----DQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 + + G +++ D L +L Q+ + + Sbjct: 343 GRADGELRWIRGALQSGSQLRWRAPLHDSTRAPAALLGELTAQLQVDQNMRVQVRMPEPA 402 Query: 186 KGSVIAEGTGNFDNKRSAF-KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 + + ++ + + P + L QL L + Sbjct: 403 DAGLTLDADLRVQGRQLPLQSMRSLLPRTSGHARLHWQLSSLRW-----------IPALF 451 Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 P ++ GD +L++ + ++ ++ +I +S D Sbjct: 452 PDVD-WLTLEGDGLVDADLQIDRGQLAAGSRLQVPHVQAQVGVM-GHAITGQASADLRVD 509 Query: 305 TKVSQDEENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDN 363 + +L H D F + + + D+Q + + Sbjct: 510 ADANGQLLPVLALKMQQFSIAHSDATTRPFVQGSDLRL--------DLQTRADARNLSSL 561 >gi|301166177|emb|CBW25752.1| putative membrane protein [Bacteriovorax marinus SJ] Length = 429 Score = 38.7 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 33/277 (11%), Positives = 92/277 (33%), Gaps = 18/277 (6%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 ML+++ I L + ++L+ P + + + +G ++ I +L Sbjct: 1 MLKKIFIILSSVVIILLLTLLFTPFHLFQNTLIDIVNK---KELGVELRASKPISYRLLS 57 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYI-----------DQ 109 + +D+++ + FE IE + + + + ++ + + Sbjct: 58 ANELLVEDLQL---KVDGFEIDIEKIDLEIDPNSIFEDHLKFRKFDLIVKSLKEVESQKE 114 Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169 S K++ V L + I + + ++ +S +++ Sbjct: 115 GKKKELKKSDQTQKVKDEKNSQGRWQKVTLSNAGISVHEILLKKYKLNE-ISISSKEVEV 173 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 S + L + LS+ ++ S++ E +S + K++ + Sbjct: 174 SLKDLLVSGELSVSALTKSIVGEVNLTKKTNQSVKATLDVKKLEEVLKIFKLENVNIYGD 233 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS 266 + +D ++ + +V G K + +L Sbjct: 234 LRVDFTSSINKSNAFLKNPMSLAVNGKKLKWIGKDLD 270 >gi|213408825|ref|XP_002175183.1| pre-rRNA-processing protein crb3/ipi3 [Schizosaccharomyces japonicus yFS275] gi|212003230|gb|EEB08890.1| pre-rRNA-processing protein crb3/ipi3 [Schizosaccharomyces japonicus yFS275] Length = 438 Score = 38.3 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 58/177 (32%), Gaps = 4/177 (2%) Query: 19 GAFTVPLFIDWTDFRED-FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG 77 G TVPLF++ ++ E A +G + G++ P I++ Sbjct: 242 GFITVPLFVNPNTKKDTSTENSAPYALGGNGKIVDGVEGEPFPSVQ-HTSAIQVLTLSFD 300 Query: 78 SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV 137 ++S ++ + +P +++ + + V Sbjct: 301 GSLLISGDAEGTVLVWDVVSKQVLRKIVTFPKPVTFLQTTTESMQLPANLTPFPMLKRMV 360 Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 E I + + I D +++ L D+ L++ L+ + + ++ E Sbjct: 361 TEEGI-LSDLSVAIEDNGVEELMQLPDI-LEVGKEILSESTESGWRAKAEALELELK 415 >gi|114565740|ref|YP_752894.1| hypothetical protein Swol_0171 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336675|gb|ABI67523.1| hypothetical protein Swol_0171 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 1117 Score = 38.3 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 26/323 (8%), Positives = 84/323 (26%), Gaps = 39/323 (12%) Query: 46 KKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDM 105 + + + G + ++ P SV +++ ++ + + + + Sbjct: 442 RNLTITGDLDVNAGPNGSVVLENVTVNGT----------TTIISGGINSVYLRNFKTTTL 491 Query: 106 YIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165 I+ H + ++G ++ + ++ G I ++ ++ ++ Sbjct: 492 RINNTH-EIRIIAQGTTS-------------LSSTYLNAPGQSITLVLDQNSGNPSFGNI 537 Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225 N S+ ++ +G D + N + ++ Sbjct: 538 NGNCDTLTWGAGDEFSMPFTAPNIDIQGNLVID---IGVAGSVNLNNVFYSGTITNTSGG 594 Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285 + ++ + V + N+ L N S Sbjct: 595 DIQALQLNTSSISESAKNDGSIETTLIVTQNKGIFNNVVAIETDPALPNNLTPSVLRNSA 654 Query: 286 SRYKLQSILP-----NSSTDEDNKTKVSQDEENLLNFSENGA--ESMHDLNETD-----F 333 S+ + + + + K + + ++ A N Sbjct: 655 SQITITFSGKALDHQAADSVKSVKIIIRAGNIDGVSSDLISAPFAINFLDNTAPNNQDTV 714 Query: 334 FEEEEKKNKNDDLKKDDIQYSVN 356 F+++ N ++ N Sbjct: 715 FKKDVTVRPNTEVTIASSGNEAN 737 >gi|260890303|ref|ZP_05901566.1| conserved hypothetical protein [Leptotrichia hofstadii F0254] gi|260859923|gb|EEX74423.1| conserved hypothetical protein [Leptotrichia hofstadii F0254] Length = 1504 Score = 38.3 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 51/156 (32%), Gaps = 13/156 (8%) Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197 L + ++ G+I +D + D + N I + I S + V Sbjct: 239 ALGSLKIRNGKISYVDLDGD----IEGANAVIDLKKDKITVNASTKLKESPVTFALAYLI 294 Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPL---AYPIIIDLFGNLFWNEKQPIYSGVFSVA 254 +++ K+ A+ +A KI + +L N +K+ G FS + Sbjct: 295 QDQKINLKLAADNLPFEEAARYKIIKNAKVDAQGKVTANLEVNSDIKKKKTTVDGKFSSS 354 Query: 255 GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 N + + KI+D + ++ Sbjct: 355 NIKLANYNFQ------NIKTAMKIADEKLTLTNTSF 384 >gi|86143904|ref|ZP_01062272.1| hypothetical protein MED217_03620 [Leeuwenhoekiella blandensis MED217] gi|85829611|gb|EAQ48074.1| hypothetical protein MED217_03620 [Leeuwenhoekiella blandensis MED217] Length = 520 Score = 38.3 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 42/389 (10%), Positives = 108/389 (27%), Gaps = 53/389 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++ LIGL ++ A + +++ R+ + + Sbjct: 1 MKKFLIGLLIFIVLLGAAALYLNTYLE-NQLRDIIQTKLPS------------------S 41 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 ++ ++++ I + + ++ ++R V + +N KG Sbjct: 42 LAIEYEELDI---DSWQGNASLKNATVRINISDS------VPKSEVKNATVNL----KGF 88 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ-------ISARFL 174 +W KS + V +E + ++ + +L + +F Sbjct: 89 KHWRYFKSKDIYFNQVSIEADTLTH----YKQSSAEPKKQTNSDSLDNPLTEEKLDRKFK 144 Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234 L I+ + + PA+++ I + + + Sbjct: 145 IKDFDLKAAYIQILKPRSSEVALHTAHFSLDLKNVTPAESQRILRPFEYESVLIKTD-SI 203 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294 + + I ++ + L +S+LS ++ + K+ Sbjct: 204 YYKTNAYDALKIKHLEWNGSSLSLNETQLVTEVSRSKLSELISKERDHMNFTIKKVDISN 263 Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL-----NETDFFEEEEKKNKNDDLKKD 349 + D K + L + D N T + + DL D Sbjct: 264 LTYGQN-DGKF---FFKAPKLTLEAPFLDIYRDKRIADDNSTKALYSKMLRELKFDLMID 319 Query: 350 DIQYSVNKKEEKDNSHDKENQENFSGDKM 378 I + +++E D + Sbjct: 320 TIALKNGGITYTERVNNQEQAGQLYFDNL 348 >gi|294666060|ref|ZP_06731320.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604161|gb|EFF47552.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 811 Score = 38.3 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 32/327 (9%), Positives = 84/327 (25%), Gaps = 39/327 (11%) Query: 31 DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE----------DGSFE 80 F Q + +++ ++G ++ + F + + I Sbjct: 221 QFDRIVAEQVQAVSLRQLHIEGQGQLQLGLFKQLRGGPMEIFPSRAVFESARVRWGQDEM 280 Query: 81 SKIEGLSMRAEFL----------PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 + L + A +L + ++ D L+ ++G R Sbjct: 281 MRNGQLRIEASIARHAPDQASGHAVLQLTDALIAVHGDTAALDVARHAQGRHTLATRPGK 340 Query: 131 MDMIHNVILEKIHVKGG-----RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 + + ++ G R + D L +L Q+ ++ + Sbjct: 341 GRADGELRWIRGALQPGSQLHWRAPLHDSTRASAALLGELTAQLQVDQNMRLTVSMPEPA 400 Query: 186 KGSVIAEGTGNFDNKRSAF-KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 + + ++ + + P + L QL L++ Sbjct: 401 DAGLTLDADVRVQGRQLPVQSMRSLLPRTSGHARLHWQLSSLSW-----------IAALF 449 Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 P ++ G+ +L + + ++ ++ +I +S D Sbjct: 450 PDVD-WLTLEGEGLVDADLRIDRGQLGAGSRLQVPHVQAQVGVM-GHAIAGQASADLRVD 507 Query: 305 TKVSQDEENLLNFSENGAESMHDLNET 331 + L H T Sbjct: 508 ADANGQLLPALALQMQQFSIAHTDAPT 534 >gi|229845754|ref|ZP_04465871.1| HMW1A, high molecular weight adhesin 1 [Haemophilus influenzae 6P18H1] gi|229811324|gb|EEP47036.1| HMW1A, high molecular weight adhesin 1 [Haemophilus influenzae 6P18H1] Length = 1257 Score = 38.3 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 34/341 (9%), Positives = 86/341 (25%), Gaps = 19/341 (5%) Query: 45 GKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVF- 103 G+ +KG I F+++ + + + +G + + Sbjct: 343 GRNQTIKGQGTITSGNRKGFRFENVSL-NGLGSKGLLFTDARTSEGNISNYFNGTLNISG 401 Query: 104 --DMYIDQPHLNFYLSSKGV--SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159 ++ + P ++ Y + G N + ++ + + Sbjct: 402 KVNISMTSPRISVYKRNNGRTFWNITTLNVAKGGSFKLSIDSRGNTNSG-QYQRNKGLNG 460 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219 S N + + + SI + F+ S N A S Sbjct: 461 ITFSGNNTFNVGKNSTVEFHID-SSIIIPGDSSNFALFNGNISVLGGGRVNFKLNAASSD 519 Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK-- 277 + ++ N + + + + L + + ++ G Sbjct: 520 HPTSGVIINSKNFNVSEGSTLNLESSGSTKTAFLIKNNLTLNATGGNIQIKQIEGTDSHI 579 Query: 278 ----ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333 +++ N+ + + T+ V Q N + A Sbjct: 580 QKGVVAEQNIIFEGGNITLGSQKAPTEIKGNVTVQQGT----NATLRSANFN-KHKGALI 634 Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374 + N N D I+ N + + + N + Sbjct: 635 VKGNVTANGNLTADGDTIEIKGNLDVAQGAKFNGSTKNNLN 675 >gi|163752848|ref|ZP_02159972.1| hypothetical protein KAOT1_11847 [Kordia algicida OT-1] gi|161326580|gb|EDP97905.1| hypothetical protein KAOT1_11847 [Kordia algicida OT-1] Length = 1670 Score = 38.3 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 20/164 (12%), Positives = 51/164 (31%), Gaps = 5/164 (3%) Query: 164 DLNLQ-ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 DLN + +A N+ ++ ++ ++I + N + F I + KA+ Sbjct: 1055 DLNAKSGNASNYNLNLAVTGQNLNLTIIGDYVANENGAPLDFDIDL-KNLELKAVEQFAS 1113 Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 ++ I L +P G + + + + S K+ + Sbjct: 1114 MYISKTSGNISGDFKLTGTTVKPSLLGALNFNNANVTINAFNAAFALPQES--IKVDEAG 1171 Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + +++K+ + + D K + + Sbjct: 1172 IYFNQFKM-LDVNKNPFVLDGKITTENLMNPAFDLTMKAKNIEV 1214 >gi|296137845|ref|YP_003645088.1| carbonate dehydratase [Tsukamurella paurometabola DSM 20162] gi|296025979|gb|ADG76749.1| Carbonate dehydratase [Tsukamurella paurometabola DSM 20162] Length = 726 Score = 38.3 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 69/242 (28%), Gaps = 24/242 (9%) Query: 7 IGLGFLFS----VVLVGAFTVPLFIDWTDFREDFERQATLIVGK-KIAVKGGIKIHILPF 61 LG LF VL G L + W R E G+ +A+ G + Sbjct: 377 TILGVLFLNLLEGVLAGLVVAILLVLWRVARASIEAS-QDSAGRWHVAIDG--SLSFFSL 433 Query: 62 PSVFF--------KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113 P + D+ I+ D + E ++ G + + D+ + ++ Sbjct: 434 PRLSRVLASVPPGGDVAIELTVDFLDHASAEEITEWVRRYRAGGGTVTIDDLGV--AQIH 491 Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 + + + + G + + + D + I + Sbjct: 492 AAGDTSPRRTTERSAERGLLPWRAHARG-GLADGIARYHRRHA--SLLSDDFDGLIDGQR 548 Query: 174 LNIISPLSIDSIKGS--VIAEGTGNFDNKRSAFKI-TANFPAKNKAISLKIQLFPLAYPI 230 + DS + A G G+ R+ + A + +L + L Sbjct: 549 PEALFLTCADSRVVPNVITASGPGDLFTVRNVGNLVPAGGVDGSLEAALTYAVDNLDVNQ 608 Query: 231 II 232 +I Sbjct: 609 VI 610 >gi|229521610|ref|ZP_04411028.1| uncharacterized protein YtfN [Vibrio cholerae TM 11079-80] gi|229341204|gb|EEO06208.1| uncharacterized protein YtfN [Vibrio cholerae TM 11079-80] Length = 1254 Score = 38.3 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 35/283 (12%), Positives = 87/283 (30%), Gaps = 19/283 (6%) Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 FP + + E ++ LS+ LL I + ++ + LN ++ Sbjct: 61 FPRFTLQGVDYADSELNLSF-SVQKLSLAINPNCLLEPSICINELALSGVKLNLPSLAES 119 Query: 121 VSNWFQRKSTM----DMIHNVILEKIHVKGG-------RIKIIDQESDQVYFLSDLNLQI 169 S + S + L ++ ++ R+ + + + L + Sbjct: 120 ESTPDEPDSEPLGDISTPIPIRLGQLALQDIELNILGNRVAWQQLTTRASWQGNRLRIGQ 179 Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229 + ++ ++ A+ + + P + I+ F L Sbjct: 180 TEWQGIRLALAESEASTEPEAAQAATSDSAEPLQL-PDVMIPLHIELARFDIRDFRLEQE 238 Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG---NVRIS 286 I + +L + S L+ +L+A+ LS ++ I V ++ Sbjct: 239 TPIIVN-HLALQATAAQHDVSISSLELSMPELDAQLNAQA-TLSQDYPIQLELRSQVHLA 296 Query: 287 RYKLQSILPNSSTDE-DNKTKVSQDEENLLNFSENGAESMHDL 328 +K Q++ + D + + D + + D+ Sbjct: 297 DFKGQTLSLAAQGSLADLTVQANLDSLAQAQLNSHFNLLDADI 339 >gi|67458948|ref|YP_246572.1| hypothetical protein RF_0556 [Rickettsia felis URRWXCal2] gi|67004481|gb|AAY61407.1| unknown [Rickettsia felis URRWXCal2] Length = 877 Score = 38.3 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 41/322 (12%), Positives = 106/322 (32%), Gaps = 43/322 (13%) Query: 13 FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID 72 FS++L F F+++ T +G G IK++ P P + + I+ Sbjct: 13 FSLLLFIIFGALSFVNYNS----VTNNLTSHLGIAKENIGKIKMNKFPLPYLIIETIK-- 66 Query: 73 QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMD 132 E +E + + L+ ++ + I S+ V N + + + Sbjct: 67 ----EGGELDLEQIKIHFSLWSLIKFNPKINKIDILDAKFY---SNSNVLNIYNHEELIK 119 Query: 133 MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE 192 L+ I++ + II+++ + ++ L+ +++ + I + Sbjct: 120 NFFKYKLQNINLNVTNLSIINKQDYSILNFNNCILK------------KENALSSNYIFK 167 Query: 193 GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS 252 T N+ KI+ + ++ + + + Y + + + SG Sbjct: 168 TTSNYIG-----KISGSINKRDDIVDFSLDIDNNDYGFKLS-----QIYKDFKLTSGSGE 217 Query: 253 VAGDFSKLLNLELSAKKSRLSGNFKISDG---NVRISRYKLQSILPN---SSTDEDNKTK 306 + + + L F ++ IS + + L + +S+ Sbjct: 218 YQIKNLASVMYNILPDLNHLFNKFNQNEAVNVKFNISNNEDEIELKDIVIASSFITGNGF 277 Query: 307 VSQDEENLL--NFSENGAESMH 326 V+ + + + N + + Sbjct: 278 VNIAKNDNITTNVKLDFPKIDL 299 >gi|120435917|ref|YP_861603.1| hypothetical protein GFO_1563 [Gramella forsetii KT0803] gi|117578067|emb|CAL66536.1| conserved hypothetical protein, secreted [Gramella forsetii KT0803] Length = 1680 Score = 38.3 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 51/370 (13%), Positives = 103/370 (27%), Gaps = 28/370 (7%) Query: 30 TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89 ++ F G KI + I I + D+ I+ + +S Sbjct: 40 NIIKDKFISSIEKKTGAKIDLD-RIFIQFNGD--IQVDDLYIEDPKG-DTIIYSNRISAN 95 Query: 90 AEFLPLLSGE-IRVFDMYIDQPHLNFYLSSKGV-----------------SNWFQRKSTM 131 PL+ G + + + N + T Sbjct: 96 ISVWPLIQGNGFSLNSLDANNVKANIIRKDSIKGFNYEFLMEAFASDTTQTQTTTPVDTS 155 Query: 132 DMIHNVILEKIHVKGGRIKIIDQESD--QVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189 ++ L +K IK IDQ S +L L S L ++ ++I + Sbjct: 156 AAPMDISLGDFDLKDFDIKYIDQVSGIDTKAKFEELKLSFSKTDLQNMAFQVSEAILNNA 215 Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249 + + A P LK +Y + D + Sbjct: 216 NISYD-QTKPFPPSEEEEAPMPVF-GIEELKFNNVSASYNSVPDSVSAQIGLNDFELAEA 273 Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309 F++ ++L + L S GN + + D K + Sbjct: 274 NFNLKDSIISGSQIKLHDSRIALKMQQNTSTGNSAEAVAETTDGFEWPGWKIDIK-SIDL 332 Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369 + N L ++ N A + + + + + D+ + + +N E K N Sbjct: 333 -QHNNLAYNVNDANVTEGVFDPNAILLDSLTLQASDIVYQNKEAKLNILELKFQEGSGFN 391 Query: 370 QENFSGDKMI 379 + F+ + ++ Sbjct: 392 IKQFNIEALV 401 >gi|319788545|ref|YP_004148020.1| hypothetical protein Psesu_2965 [Pseudoxanthomonas suwonensis 11-1] gi|317467057|gb|ADV28789.1| protein of unknown function DUF490 [Pseudoxanthomonas suwonensis 11-1] Length = 1274 Score = 38.3 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 39/296 (13%), Positives = 80/296 (27%), Gaps = 19/296 (6%) Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG--V 121 + D+ + + + PLL +R+ ++ LN S + + Sbjct: 83 LVLHDLEFRY---QDYRFTARRAVLDPDIRPLLGKRLRLDAFVLEDATLNLARSDEPFEL 139 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP-L 180 W ++M + + + V G RI + V + L I + + L Sbjct: 140 PRWPDSLPAIEMPLAIQADAMVVDGLRIT---SGGEPVIDIRKLRGGIDIANGGLHAEHL 196 Query: 181 SIDSIKGSVIAEGT-GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 + S G G ++ RS TA FP + + ++ L +D+ Sbjct: 197 EVHSDLGLFSVHGDYVPAEDYRSDLLATAVFPVADGGVPARLGLIARGDLSRMDVGIGGR 256 Query: 240 WNEKQ-PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298 S + +L +G + + V Q + Sbjct: 257 APRPLRASLSLGGNEDAPAWQLRARSEGLDPGLFTGAAPMEEPLVFDVAADGQGGAAD-- 314 Query: 299 TDEDNKTKV---SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 +V + D + +E + + D D Sbjct: 315 --ISGTARVGGQDWVVAPS-HVRLEDQVLDVDPLVLELYEGQVRLRGRADFTNPDE 367 >gi|314928106|gb|EFS91937.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1] Length = 281 Score = 38.3 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 84/260 (32%), Gaps = 35/260 (13%) Query: 12 LFSVVLVGAFTVPLFIDWTDFRED----FERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67 L ++V++ V I FR +G + G + IH LPF V Sbjct: 50 LVALVVIALLAVVAAIVDQTFRARAEKDIAATIAKSIGANASTVG-VTIHNLPFLGVLVT 108 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127 D + + ++ ++ F + + + + +S+ G +W + Sbjct: 109 D-ELQGIDTTISKATVDRDDTTVTFRDVDIHANGIRHAREESQAVAETMSATGRIDWSEL 167 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187 + GG++ D + + ++ + + + ++I + + + Sbjct: 168 S--------------RLAGGKVTYNDD-TGETGRVAIVTVLGARVDVSITAVPGVKTTSR 212 Query: 188 SVIAEG-TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 V + + D+ + LK L + + GNL + + Sbjct: 213 RVTLSSPSASLDDIPIP------------DVLLKPILDGITSRFTLPDLGNLHYESLKAT 260 Query: 247 YSG-VFSVAGDFSKLLNLEL 265 G FS+ G KL +L Sbjct: 261 SQGLDFSLVGTGVKLSDLTG 280 >gi|313836597|gb|EFS74311.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2] gi|314972106|gb|EFT16203.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3] Length = 281 Score = 38.3 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 84/260 (32%), Gaps = 35/260 (13%) Query: 12 LFSVVLVGAFTVPLFIDWTDFRED----FERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67 L ++V++ V I FR +G + G + IH LPF V Sbjct: 50 LVALVVIALLAVVAAIVDQTFRARAEKDIAATIAKSIGANASTVG-VTIHNLPFLGVLVT 108 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127 D + + ++ ++ F + + + + +S+ G +W + Sbjct: 109 D-ELQGIDTTISKATVDRDDTTVTFRDVDIHANGIRHAREESQAVAETMSATGRIDWSEL 167 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187 + GG++ D + + ++ + + + ++I + + + Sbjct: 168 S--------------RLAGGKVTYNDD-TGETGRVAIVTVLGARVDVSITAVPGVKTTSR 212 Query: 188 SVIAEG-TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 V + + D+ + LK L + + GNL + + Sbjct: 213 RVTLSSPSASLDDIPIP------------DVLLKPILDGITSRFTLPDLGNLHYESLKAT 260 Query: 247 YSG-VFSVAGDFSKLLNLEL 265 G FS+ G KL +L Sbjct: 261 SQGLDFSLVGTGVKLSDLTG 280 >gi|222081854|ref|YP_002541219.1| alpha-galactosidase [Agrobacterium radiobacter K84] gi|221726533|gb|ACM29622.1| alpha-galactosidase [Agrobacterium radiobacter K84] Length = 696 Score = 38.3 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 14/157 (8%), Positives = 35/157 (22%), Gaps = 27/157 (17%) Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--- 78 F+ G+++ + + + V + +D +E Sbjct: 509 GASRFVPPELLGAHIAASPNHQTGRRLTLSFRALVALAYHLGVELNPLALDAEEKQELEG 568 Query: 79 ---------FESKIEGLSMRAEFLP--LLSGEIRVFDM---YIDQPH--------LNFYL 116 G R L + G + P + + Sbjct: 569 WIALHKSLRPLLHAPGKQFRLPPLDGRYVWGAADESRIVAFVAQGPQMVGEQPAPVRLPV 628 Query: 117 SSKGVSNWFQRKSTMDMIHNVIL--EKIHVKGGRIKI 151 S +G W + + + + + G + Sbjct: 629 SGEGAGKWRVKAIHPAEPEFIRISEGQQRLLNGELTF 665 >gi|187777281|ref|ZP_02993754.1| hypothetical protein CLOSPO_00833 [Clostridium sporogenes ATCC 15579] gi|187774209|gb|EDU38011.1| hypothetical protein CLOSPO_00833 [Clostridium sporogenes ATCC 15579] Length = 456 Score = 38.3 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 23/221 (10%), Positives = 72/221 (32%), Gaps = 13/221 (5%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 +R+L L VV F + + ++ D+R + + + + + I I++++ P Sbjct: 6 KRILYTLTVTLIVVFSSTFAILMTLERNDYRNYLQGEYSKNLHELITSVQNIRVNLSKAP 65 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + ++ E + + + + I + Sbjct: 66 IIGSRE---------QEIVTFEEIFKYSSMANDKLHSLPIDQNTITNTSKFLSQVGDFSN 116 Query: 123 NWFQRKSTMDMIHNVILEKI-HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + + + + I +K +++ +Q ++ V +++ ++ + L Sbjct: 117 SLAKSIVKNNNLSKDDYDNIERLKKESLQLENQLNNVVMDVNEGRVRWGDIRKKVSGVL- 175 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222 + + +G N K+ + +L+I Sbjct: 176 --AKENPNSIKGQFNNIQKQVMQYPALIYDGPFSDNTLEIT 214 >gi|312898375|ref|ZP_07757765.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] gi|310620294|gb|EFQ03864.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] Length = 1430 Score = 37.9 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 32/360 (8%), Positives = 91/360 (25%), Gaps = 69/360 (19%) Query: 2 LRR--VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFER--------------------- 38 ++R + + +F VV AF W + Sbjct: 1 MKRHRLFTSVVIIFLVVFGVAFIWMRTALWPRLPQMITSLADEKINGTLTFSDMHISLTG 60 Query: 39 -------QATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAE 91 + G+++ + + I PF +V + ++ Sbjct: 61 KVVFTDVAVSDAQGRRVLDSEEVDVTINPFKAV-VSSLSSGHTAGAVDLVDVKT------ 113 Query: 92 FLPLLSGEIRVFDMYIDQPHLNFYLSS-KGVSNWFQRKSTMDMIHNVILE-KIHVKGGRI 149 P L+ + + N + + L I + G Sbjct: 114 ------------------PVLHVWQNPTDKSWNVTKLFKKQSPDQPMALRSNILIHDGTF 155 Query: 150 KIIDQESDQVYFLSDLNLQIS-ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208 ++ + + +N +S A + ++ + V + K+ Sbjct: 156 RVA-PAQGKTAVVEKVNGSVSLADYPSVRGDATASVDGQDVSLSVH-YLSARDYDIKVKG 213 Query: 209 NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY-SGVFSVAGDFSKLLNLELSA 267 + + N P+ + + G + G+F+ L Sbjct: 214 SGLSAN----FAASYVPVDTGVSLTEGGVGEYFLHIRESHDGLFAEGQADLNHLGFVYGD 269 Query: 268 KKSR-LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 + ++G ++ D ++ ++ + + + K++ + + + Sbjct: 270 YRVSDVTGQIRLFDTDLHLNDVHAKVN--DQAVAVSGLVKIN-GNVPVFDLKVDADRVDM 326 >gi|255536628|ref|YP_003096999.1| hypothetical protein FIC_02507 [Flavobacteriaceae bacterium 3519-10] gi|255342824|gb|ACU08937.1| hypothetical protein FIC_02507 [Flavobacteriaceae bacterium 3519-10] Length = 883 Score = 37.9 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 47/380 (12%), Positives = 116/380 (30%), Gaps = 34/380 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 M ++ L L F V+V V F R + + +++ + Sbjct: 1 MKKKYLRPLSI-FVAVVVLITLVLNFGANFWLRNNLSGYIKKNSNYNVKYS-SLEVDMFT 58 Query: 61 FPSVFFKDIRIDQKEDGSF-----ESKIEGLSM-RAEFLPLL-SGEIRVFDMYIDQPHLN 113 + I + K G E I+ LS+ R +L + I ++ + +P L Sbjct: 59 G-RISAAGISVRSKNSGDQNTIGLEGSIDTLSVSRLGIYDVLFNKTISSNNLLLVKPDLK 117 Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173 L+ T + V+ + + + G I ++ + + DL L + Sbjct: 118 ITLAK------PVDDKTKKKRNPVLFKNLKISNGNITVLRHTKQKFLEVKDLELNVENIQ 171 Query: 174 LNIIS-PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232 + S + + + +G + + A + ++ + A ++ Sbjct: 172 MTEESMERKLPLVFDTYDIKGKDFYFG---PDDVYAVTAQTITTEAGQMSIRNFAVKPLL 228 Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GNFKISDGNVRISRYKLQ 291 + P ++ ++ L K LS +F+ D + + K Sbjct: 229 SYQ---NFRRFHPNDKNLYDFKATEMNFKDVALDDDKVALSHAHFQNPDLKIMTTSAKAV 285 Query: 292 SILPNSSTDEDNKTKVSQDEE-----NLLNFSENGAESMHDLNETDFFEEEEK-----KN 341 + + + + + ++ + + A+ ++N+ E K + Sbjct: 286 RKKKDLNVTVNMEDVLFKNAKISILNPNGTPKLSAADVTLNINKFVMDSETSKSPLPFEY 345 Query: 342 KNDDLKKDDIQYSVNKKEEK 361 N + I + + Sbjct: 346 ANFSVAGKQINFVTETQNIN 365 >gi|300725273|ref|YP_003714602.1| hypothetical protein XNC1_4518 [Xenorhabdus nematophila ATCC 19061] gi|297631819|emb|CBJ92540.1| conserved hypothetical protein; putative exported protein [Xenorhabdus nematophila ATCC 19061] Length = 590 Score = 37.9 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 98/331 (29%), Gaps = 50/331 (15%) Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 P+V+ KD+ I + ++ L+ + L LL+G G+ Sbjct: 248 PAVYVKDLNITNAKLQGKNWSVDYLNSTIKNLGLLNGSWDA---------------EDGL 292 Query: 122 SNWFQRKSTMDMIHNVI-LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 ++ + L K H G I + + L ++ Q + + Sbjct: 293 VDFHAMDMAFNNAQFSDTLGKFHFSGETFTIANLTTHYQKGLFNIQSQWDRKSRQLTLKN 352 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 S TG F + S + PA LK+ + ++ID + Sbjct: 353 S----------SVTGLFYSLPSTWLDDLQNPAPGWISGLKLNDISINNALLIDTHPQFPF 402 Query: 241 ---------NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS---GNFKISDGNVRISRY 288 + + +G + + + K ++ F +D + I + Sbjct: 403 QLTTLSGYVDNLDILKNGKWGFWNGQASFQAAAGTFNKIEITRPYLQFHATDDTITIDK- 461 Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-------EEEEKKN 341 L + + + N + G + ++ + E Sbjct: 462 -LNAFTNEGLLQINGTAAQRTSQTP-FNLNFKGMNADLNILPQWGWVPLNIQGEGNFSLA 519 Query: 342 KNDDLKKDDIQYSVNKK--EEKDNSHDKENQ 370 DL DI+ ++N E S DKE+Q Sbjct: 520 ITGDLSAHDIKGTINGTLVAEGSKSSDKESQ 550 >gi|311747823|ref|ZP_07721608.1| hypothetical protein ALPR1_15884 [Algoriphagus sp. PR1] gi|126575814|gb|EAZ80124.1| hypothetical protein ALPR1_15884 [Algoriphagus sp. PR1] Length = 533 Score = 37.9 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 32/307 (10%), Positives = 87/307 (28%), Gaps = 36/307 (11%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGK--KIAVKGGIKIHIL 59 +++ L ++L+ F + + I I + Sbjct: 1 MKKF-----GLIVLILLITGVAGTFFLENWLTHRIPETVNSNPDRDYDLVFD-DIDIQLF 54 Query: 60 PFPSVFFKDIRIDQKEDGSFESKIE------GLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113 V +DI + + S SK+ +S + + ++ + ++ I +P Sbjct: 55 -KRRVVIRDI-LMNPMNDSLSSKVNGSLRSIRMSGVNLWKLIFEDKLEIDELKIIEPAFR 112 Query: 114 FYLSSKGVSNWFQRKSTMDMIHNV----ILEKIHVKGGRIKIIDQESD--QVYFLSDLNL 167 KG ++ + ++ ++ ++ G ++ + + +DLN+ Sbjct: 113 LIQREKGSHGQNSSQAFQLIFQDIISRGEIKHFVLEKGTAEMFVESDSLFRFGHFTDLNI 172 Query: 168 QISARFLNIISPLSIDSIKGSVIA-EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226 + + S I + N + F ++ + L Sbjct: 173 ----KADGLESDSIIIKQAVPFKLASLEASIKNVQIQIDSEQEFNVESIDYK-SLNNEIL 227 Query: 227 AYPIIIDLFGNLFWNEKQPIYS---GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 I + + + Y + ++ E S G++ + G + Sbjct: 228 FEGISLKFKEGIDAAVQNAAYQQDLIELDIQTVKLGHIDTESSIY-----GDWSVKAGLL 282 Query: 284 RISRYKL 290 + L Sbjct: 283 TVDSLVL 289 >gi|307323959|ref|ZP_07603168.1| conserved hypothetical protein [Streptomyces violaceusniger Tu 4113] gi|306890408|gb|EFN21385.1| conserved hypothetical protein [Streptomyces violaceusniger Tu 4113] Length = 278 Score = 37.9 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 14/141 (9%), Positives = 39/141 (27%), Gaps = 6/141 (4%) Query: 43 IVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRV 102 V ++ +G + + P+P V + + + + + + + R+ Sbjct: 140 AVERETRRRGKLLDSLWPYPQVDTEPVVLRRPDGRAPAVTSRQ-RAVLALADGVRTPARI 198 Query: 103 FDMYIDQPH----LNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158 + +P ++ + R + L + Sbjct: 199 AR-ELGRPAFHTLIDIRRLAAAGHVATPRPARPGRPGGPDLPARSGASAPPAADRGPAAA 257 Query: 159 VYFLSDLNLQISARFLNIISP 179 V+ D++L R +P Sbjct: 258 VFTDPDIDLLRRLRDALEATP 278 >gi|310765309|gb|ADP10259.1| conserved uncharacterized protein YtfN [Erwinia sp. Ejp617] Length = 1257 Score = 37.9 bits (86), Expect = 2.6, Method: Composition-based stats. Identities = 40/324 (12%), Positives = 91/324 (28%), Gaps = 22/324 (6%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL +F + I+G+++ + G I + ++ + + Sbjct: 214 ALFAKPLLPILPEFVLPLDVNVQQILGEQLRITGDSDITVNRLLLKAKTERNQLWLQSLD 273 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 +D + LS L+ I V + ++ + + + S Sbjct: 274 VDSPQGQLNAQGQATLSGSWPLNFTLNSAINVEPLKGEKIKMTLDGGLRDTTKLALNLSG 333 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 ++ V G + + Q + L +A+F SI+ + Sbjct: 334 PVRAQLDADSQLAVAGLPLNMRLQSPQLRWPLDG-----AAQFQASNVNFSINGKATDYV 388 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNLFWNEKQPIYSG 249 + T K + L A DL + W++ + Sbjct: 389 MSLKAALQGEGMP-PATLTLDGKGNVEQFSLDKLRLAALQGNTDLTALVDWSK-AISWRS 446 Query: 250 VFSVAGDFSKLLNLELSAKK---SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT- 305 +++G + + AK G+ +R+ KL+ + N++ D Sbjct: 447 KLTLSGINTAKQYPDWPAKLEGVITTRGSLYGGSWQMRVPELKLKGNVRNNAVSADGSLS 506 Query: 306 --KVSQDEENLLNFSENGAESMHD 327 +Q + + Sbjct: 507 GNSYNQWDIPGIKLVLGRNNLNLK 530 >gi|308188243|ref|YP_003932374.1| hypothetical protein Pvag_2766 [Pantoea vagans C9-1] gi|308058753|gb|ADO10925.1| Uncharacterized protein ytfN [Pantoea vagans C9-1] Length = 1255 Score = 37.9 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 94/305 (30%), Gaps = 29/305 (9%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS 78 F PL DFR + + I+G+++ + G + + + K Sbjct: 213 AMFAQPLLPALPDFRLPLDIEVQQILGEQLRITGDTD--------ISVSRLLLKAKTADR 264 Query: 79 FESKIEGLSMRAEFLPL-LSGEIRVFDMYIDQPHLNFYLSSK---GVSNWFQRKSTMDMI 134 ++ L + + L SG+ + D + LN +++ G + M Sbjct: 265 HM-QLTTLEVDSNLGNLNGSGQATLADNWPVDFTLNGTVNTDPIKGEKLALKLNGAMRDE 323 Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 + L ++ D + L+LQ+++ L + + + Sbjct: 324 LKLGLNLSGPVKAQL---DATTQLAVAGLPLSLQLTSPQLRWPLTGPVQYQADDLNYQFK 380 Query: 195 GNFDNKRSAFKI-----TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW-----NEKQ 244 G + + + + + ++ F L + L GN+ K Sbjct: 381 GKATDYVMSLQTAVKGESVPPATVSLTGKGNVEQFSLDRLRVAALQGNIDLTALVDWSKA 440 Query: 245 PIYSGVFSVAGDFSKLLNLELSA---KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 + ++AG + + A K G+ + + + +L+ + ++ Sbjct: 441 ISWRSELTLAGINTAKQYPDWPARLDGKITTRGSLYGGSWQLSVPQLQLKGNVKQNAVTA 500 Query: 302 DNKTK 306 D Sbjct: 501 DGSLT 505 >gi|294055575|ref|YP_003549233.1| hypothetical protein Caka_2045 [Coraliomargarita akajimensis DSM 45221] gi|293614908|gb|ADE55063.1| hypothetical protein Caka_2045 [Coraliomargarita akajimensis DSM 45221] Length = 16477 Score = 37.9 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 31/309 (10%), Positives = 79/309 (25%), Gaps = 10/309 (3%) Query: 48 IAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 + +KG I++ I + + I I ED + P + E+ + + Sbjct: 2362 VVIKGTIRVRISTLNTAVDETISIPGTEDEVPVV-FSAFEVADATGPFI--EVYGLGLTV 2418 Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILE-KIHVKGGRIKIIDQESDQVYFLS--- 163 + + T + + + ++ + + D +D V Sbjct: 2419 EAAGQHISTDLSIQQVLTDVNGTPGDSSDDRKDLLLTLRNASLSLGDSSTDYVTLTDGFG 2478 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223 ++ + + I + D + + A T + + Sbjct: 2479 EILISDAGIAGAIGGTIRTDIPGVQFSGRFSVVLNTTAQAVDRTFTTAVDTDGNATETIS 2538 Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283 +A P + + ++ S + LS Sbjct: 2539 GIVAGPYVRLIGESVSLEIAGQSMSADIYFEQMTLPTGEGIFVLGINNLSIGL-GDGTTD 2597 Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN-- 341 ++ + + +L +S + L+F+ +N E + Sbjct: 2598 YLTITEGKGLLIVTSAGVAGELSARVALAPSLDFTLAVDRLTLAINTQGVAVNESLELGG 2657 Query: 342 KNDDLKKDD 350 + DL Sbjct: 2658 ELIDLSLPA 2666 >gi|294625362|ref|ZP_06703997.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600342|gb|EFF44444.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 813 Score = 37.9 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 31/327 (9%), Positives = 83/327 (25%), Gaps = 39/327 (11%) Query: 31 DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE----------DGSFE 80 F Q + +++ ++G ++ + F + + I Sbjct: 223 QFDRIVAEQVQAVSLRQLHIEGQGQLQLGLFKQLRGGPMEIFPSRAVFESARVRWGQDEM 282 Query: 81 SKIEGLSMRAEFL----------PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 + L + A +L + ++ D L+ ++G R Sbjct: 283 MRNGQLRIEASIARHAPDQASGHAVLQLTDALIAVHGDTAALDVARHAQGRHTLATRPGK 342 Query: 131 MDMIHNVILEKIHVKGGR-IKII----DQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185 + + ++ G + D L L Q+ ++ + Sbjct: 343 GRADGELRWIRGALQPGSQLHWRSPLHDSTRASAALLGALTAQLQVDQNMRLTVSMPEPA 402 Query: 186 KGSVIAEGTGNFDNKRSAF-KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244 + + ++ + + P + L QL L++ Sbjct: 403 DAGLTLDADVRVQGRQLPVQSMRSLLPRTSGHARLHWQLSSLSW-----------IAALF 451 Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304 P ++ G+ +L + + ++ ++ +I +S D + Sbjct: 452 PDVD-WLTLEGEGLVDADLRIDRGQLGAGSRLQVPHVQAQVGVM-GHAIAGQASADLRVE 509 Query: 305 TKVSQDEENLLNFSENGAESMHDLNET 331 + L H T Sbjct: 510 ADANGQLLPALALQMQQFSIAHSDAPT 536 >gi|85000927|ref|XP_955182.1| hypothetical protein [Theileria annulata strain Ankara] gi|65303328|emb|CAI75706.1| hypothetical protein, conserved [Theileria annulata] Length = 676 Score = 37.9 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 21/278 (7%), Positives = 64/278 (23%), Gaps = 31/278 (11%) Query: 33 REDFER--QATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI-EGLSMR 89 + + E Q + I G + +KG + + + D + Sbjct: 126 KLEIEAKGQISTITGSDVTIKGD---------------VTVTNQGDLRNALTLTHNDHSS 170 Query: 90 AEFLPLLSGEIRVFDMYIDQPHLNFYLSS-KGVSNWFQRKSTMDMIHNVILEKIHVKGGR 148 ++ + + I+ +N ++ + + + T+ I V Sbjct: 171 TGLSGTITPKDTDSKVTINGSSINLTGTALDALKSLTKNAVTLTNGSFRSSASITVTSSD 230 Query: 149 IKIIDQESDQV-YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207 + ++ ++ I + + + ++ + + G Sbjct: 231 VDFKTLNVGSSGLQITKISGTIKNADGSELQRSTPLTVGDKLTLDANGTITQ---PQTAK 287 Query: 208 ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA 267 N I + + + N +L++ Sbjct: 288 NTPVKLNGTIVVTSNDQEIGSTLTFGGDPNRSGVTGSLNLDNDRGRKYVKITGTDLKID- 346 Query: 268 KKSRLSGNFKISDGNVRISRYKLQSILPN--SSTDEDN 303 SG ++ G + + Sbjct: 347 -----SGAYQAIQGAADTTSSSFTIGAADPRDPGSITG 379 >gi|310768276|gb|ADP13226.1| two-component system sensor kinase [Erwinia sp. Ejp617] Length = 453 Score = 37.9 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 10/104 (9%) Query: 12 LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71 LF V + LF+ W R RQ + KG + + + P + ++ Sbjct: 157 LFIVGGICGLLFSLFLAWNLTRPM--RQLRAGFAR--VAKGDLSVRLFPQMRLRHDELSA 212 Query: 72 DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 ++ + +E L + L ++ + P Sbjct: 213 VARDFD---AMVERLLVLVSAREELLHDVSHE---LRSPLARLQ 250 >gi|298346923|ref|YP_003719610.1| non-specific serine/threonine protein kinase [Mobiluncus curtisii ATCC 43063] gi|298236984|gb|ADI68116.1| non-specific serine/threonine protein kinase [Mobiluncus curtisii ATCC 43063] Length = 663 Score = 37.9 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 77/269 (28%), Gaps = 37/269 (13%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFRED---FERQATLI----VGKKIAVKGGIK 55 R LIG V+L T +R +Q + + + + Sbjct: 373 RWFLIGGIIGAIVLLAAILTWFFMWGPGSYRPMVDVVNQQWSDASKSLTAADVTFE---R 429 Query: 56 IHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAE------FLPLLSGEIRVFDMYIDQ 109 + + +V ++ G + + + +P L+G+ + + + + Sbjct: 430 VDVFDD-NVPAGNVARTDPAPGKPLGRFQTAKIFVSKGVEMLTMPDLTGKTQEDALELVK 488 Query: 110 ------PHLNFYLS---SKGVSNWFQRKSTMDMIHNVILEKIHVKGGR--IKIID----Q 154 P ++ +G + Q + + + + K+ V GR + ++D Sbjct: 489 KARFNAPQISEEFHDTVPEGQVS-AQDPAPNASVPHNTIVKVTVSKGRQPVTMLDLVGKP 547 Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG-NFDNKRSAFKIT---ANF 210 S+ L+ + LQ + I SV T D A Sbjct: 548 GSEAQSELTKVGLQPQVKEEFSDGVPKGKVISQSVAPNTTLHRLDQVTLVVSKGPEMAAV 607 Query: 211 PAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 P + + + +++ Sbjct: 608 PNVFGKSEGEARSALESAGFTVNVKRTFG 636 >gi|283477010|emb|CAY72902.1| Uncharacterized protein ytfN [Erwinia pyrifoliae DSM 12163] Length = 1222 Score = 37.6 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 40/324 (12%), Positives = 90/324 (27%), Gaps = 22/324 (6%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL +F + I+G+++ + G I + ++ + + Sbjct: 179 ALFAKPLLPILPEFVLPLDVNVQQILGEQLRITGDSDITVNRLLLKAKTERNQLWLQSLD 238 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 +D + LS L+ I V + ++ + + + S Sbjct: 239 VDSPQGQLNAQGQATLSGSWPLNFTLNSAINVEPLKGEKIKMTLDGDLRDTTKLALNLSG 298 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 ++ V G + + Q + L +A+F SI+ + Sbjct: 299 PVRAQLDADSQLAVAGLPLNMRLQSPQLRWPLDG-----AAQFQASNVNFSINGKATDYV 353 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNLFWNEKQPIYSG 249 + T K + L A DL + W++ + Sbjct: 354 MSLKAALQGEGMP-PATLTLDGKGNVEQFSLDKLRLAALQGNTDLTALVDWSK-AISWRS 411 Query: 250 VFSVAGDFSKLLNLELSAKK---SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT- 305 +++G + AK G+ +R+ KL+ + N++ D Sbjct: 412 KLTLSGINTAKHYPAWPAKLEGVITTRGSLYGGSWQMRVPELKLKGNVRNNAVSADGSLS 471 Query: 306 --KVSQDEENLLNFSENGAESMHD 327 +Q + + Sbjct: 472 GNSYNQWDIPGIKLVLGRNNLNLK 495 >gi|320103922|ref|YP_004179513.1| hypothetical protein Isop_2388 [Isosphaera pallida ATCC 43644] gi|319751204|gb|ADV62964.1| hypothetical protein Isop_2388 [Isosphaera pallida ATCC 43644] Length = 1180 Score = 37.6 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 91/294 (30%), Gaps = 27/294 (9%) Query: 28 DWTDFREDFERQATLIVGKKIAVKGGIKI---HILPFPSVFFKDIRIDQKEDGSFESKIE 84 W R + ++ + IA G +++ R+ E + E Sbjct: 39 PWLAGRPEMLAVLNTMLNEAIA-PGRLELDAAQFSWNHRQRLGPGRLLDGEG-RMLASFE 96 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN--------WFQRKSTMDMIHN 136 L++ + L++ + D+ ++ +L ++ G N + + + Sbjct: 97 SLTLNRGLVALIANPADLGDLVVEGLNLVVERTADGHVNLVDALNESPWATSKKDEPSNG 156 Query: 137 VILEKI--------HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188 LE + GGR+K++ E + L+ ++ L + + Sbjct: 157 FQLEPFDPGLNLTLKLVGGRLKLVTPELVAPLVVDRLDAKLVLATAPAPITLEL-GLAQQ 215 Query: 189 VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248 A + N A K L + +P+ + + G + Q Sbjct: 216 EGATLAVQALLATATTSDDTNTNADAKEPLLSAVIQATNWPLTVRVEG----LDTQAHLD 271 Query: 249 GVFSVAGDFSKLLNLELSAKKSRLSGNFK-ISDGNVRISRYKLQSILPNSSTDE 301 G + + L +L ++L + + + R +L + L + T Sbjct: 272 GRIELRALSANLWSLAAQTTLTQLVAEGTALQGDRLALDRVELDADLLSKETGL 325 >gi|259907810|ref|YP_002648166.1| two-component system sensor kinase [Erwinia pyrifoliae Ep1/96] gi|224963432|emb|CAX54920.1| two-component system sensor kinase [Erwinia pyrifoliae Ep1/96] gi|283477680|emb|CAY73596.1| putative two-component system sensor kinase [Erwinia pyrifoliae DSM 12163] Length = 453 Score = 37.6 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 10/104 (9%) Query: 12 LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71 LF V + LF+ W R RQ + KG + + + P + ++ Sbjct: 157 LFIVGGICGLLFSLFLAWNLTRPM--RQLRAGFAR--VAKGDLSVRLFPQMRLRHDELSA 212 Query: 72 DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 ++ + +E L + L ++ + P Sbjct: 213 VARDFD---AMVERLLVLVSAREELLHDVSHE---LRSPLARLQ 250 >gi|298290835|ref|YP_003692774.1| hypothetical protein Snov_0830 [Starkeya novella DSM 506] gi|296927346|gb|ADH88155.1| protein of unknown function DUF490 [Starkeya novella DSM 506] Length = 1422 Score = 37.6 bits (85), Expect = 3.4, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 107/360 (29%), Gaps = 47/360 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV---GKKIAVKGGIKIHI 58 ++R L + F +++ + T + R A+ + G ++ ++ I Sbjct: 1 MKRALRSVLFALLLLVALVAAAFGVLQTTPGKALLARTASSLASSGGMQVDIR-DIS-GF 58 Query: 59 LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 +PF + I + + ++I+G + L LLSG + V + + L Sbjct: 59 VPF-DMGVGAIELADAKG--PFARIDGARLDWRPLALLSGRLDVTTLAAQRVELQ-RRPE 114 Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS---DLNLQISARFLN 175 S V +E + + I + + LS +L A+ L+ Sbjct: 115 LPPSEPSTSSGGSSFALPVRVETLTIPD--IVLDEPVLGHAAQLSLTGSADLASLAQGLS 172 Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-------------------NKA 216 + L GSV + +R I A PA + Sbjct: 173 LTFALERRDEPGSVSGSAAYAPEGERLDLDIAAREPAGGLIARAAGMEGLPALEATLKGS 232 Query: 217 ISLKIQLFPLAYP----IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL-ELSAKKSR 271 L LA + + + + +L L ++ Sbjct: 233 GPLDAWNGQLALSAGDVAAVSGAAGIRATPQGRRLTFGLDADIARLLPADLAPLFEGRTE 292 Query: 272 LSGNFKISDGN-VRISRYKLQS--------ILPNSSTDEDNKTKVSQDEENLLNFSENGA 322 L+G +S+ + I + ++ +++ D V+ + GA Sbjct: 293 LAGAATLSNERDIAIENFTARAAGFNASAGGTLDAANTADLTFDVTLGDAARFAALARGA 352 >gi|254302564|ref|ZP_04969922.1| hypothetical protein FNP_0189 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322756|gb|EDK88006.1| hypothetical protein FNP_0189 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 495 Score = 37.6 bits (85), Expect = 3.4, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 8/109 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++ IG+ LF V+LV +E ER+ + + + G + + Sbjct: 1 MKK-FIGILLLFIVILVTVLYFARDF---LLKEYLERKMSKANNAPVTI-GSVDLDYF-E 54 Query: 62 PSVFFKDIRI-DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 V KDI++ + I+ L E I D I+ Sbjct: 55 SYVTLKDIKVMSNLHEDEIFISIDELKSYYEI-DFRKKIITFDDTEING 102 >gi|73921731|sp|O68900|PET_ECO44 RecName: Full=Serine protease pet autotransporter; Contains: RecName: Full=Serine protease pet; AltName: Full=Plasmid-encoded toxin pet; Contains: RecName: Full=Serine protease pet translocator; Flags: Precursor gi|3095184|gb|AAC26634.1| Pet precursor [Escherichia coli] gi|284924610|emb|CBG27789.1| serine protease (plasmid-encoded toxin Pet) [Escherichia coli] Length = 1295 Score = 37.6 bits (85), Expect = 3.4, Method: Composition-based stats. Identities = 28/266 (10%), Positives = 74/266 (27%), Gaps = 20/266 (7%) Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF-------------YLS 117 + Q + + + + + L++ L + ++ +N ++ Sbjct: 623 LSQPDWETRKFRFDNLNIEDSSLSIARNADVEGNIQAKNSVINIGDKTAYIDLYSGKNIT 682 Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177 G + KS + + I G I I D+ + +S L+ Sbjct: 683 GAGFTFRQDIKSGDSIGESKFTGGIMATDGSISIGDKAIVTLNTVSSLDRTALTIHKGAN 742 Query: 178 SPLSID-SIKGSVIAEGTGNFDNK-RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 S ++ + G S +IT + L + Sbjct: 743 VTASSSLFTTSNIKSGGDLTLTGATESTGEITPSMFYAAGGYELTEDGANFTAKNQASVT 802 Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---RLSGNFKISDGNVRISR--YKL 290 G++ + + G ++ L+ G+ K + ++ ++ +K+ Sbjct: 803 GDIKSEKAAKLSFGSADKDNSATRYSQFALAMLDGFDTSYQGSIKAAQSSLAMNNALWKV 862 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLN 316 + + +N+ N Sbjct: 863 TGNSELKKLNSTGSMVLFNGGKNIFN 888 >gi|144897790|emb|CAM74654.1| conserved hypothetical protein, secreted [Magnetospirillum gryphiswaldense MSR-1] Length = 244 Score = 37.6 bits (85), Expect = 3.4, Method: Composition-based stats. Identities = 25/185 (13%), Positives = 62/185 (33%), Gaps = 22/185 (11%) Query: 18 VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG 77 G + +D + ++ E T + G K++V G +KI + + + Sbjct: 18 AGVAFLSSNLD-SIVKKVIETAGTEVAGVKVSV-GDVKISL-SEGKATIAGLTVANPPGF 74 Query: 78 --SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST----- 130 K+ +++ + L + I + D+ + P + + + + G SN + Sbjct: 75 SAPHAFKLGAIAVALDTGSLTANPIVIKDISVAAPEVTYEMGAGGGSNIDAIQKNVAAKT 134 Query: 131 ----------MDMIHNVILEKIHVKGGRIKIIDQESD--QVYFLSDLNLQISARFLNIIS 178 +I++++ + G + + L+D+ L R S Sbjct: 135 AGSGDKATAEKGEEKKLIIDRLVISKGTVNLATAIPGVKSSATLADIVLTGIGRKSGGAS 194 Query: 179 PLSID 183 + Sbjct: 195 AGEVA 199 >gi|259907200|ref|YP_002647556.1| hypothetical protein YtfN [Erwinia pyrifoliae Ep1/96] gi|224962822|emb|CAX54281.1| conserved uncharacterized protein YtfN [Erwinia pyrifoliae Ep1/96] Length = 1257 Score = 37.6 bits (85), Expect = 3.5, Method: Composition-based stats. Identities = 40/324 (12%), Positives = 90/324 (27%), Gaps = 22/324 (6%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL +F + I+G+++ + G I + ++ + + Sbjct: 214 ALFAKPLLPILPEFVLPLDVNVQQILGEQLRITGDSDITVNRLLLKAKTERNQLWLQSLD 273 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130 +D + LS L+ I V + ++ + + + S Sbjct: 274 VDSPQGQLNAQGQATLSGSWPLNFTLNSAINVEPLKGEKIKMTLDGDLRDTTKLALNLSG 333 Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 ++ V G + + Q + L +A+F SI+ + Sbjct: 334 PVRAQLDADSQLAVAGLPLNMRLQSPQLRWPLDG-----AAQFQASNVNFSINGKATDYV 388 Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNLFWNEKQPIYSG 249 + T K + L A DL + W++ + Sbjct: 389 MSLKAALQGEGMP-PATLTLDGKGNVEQFSLDKLRLAALQGNTDLTALVDWSK-AISWRS 446 Query: 250 VFSVAGDFSKLLNLELSAKK---SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT- 305 +++G + AK G+ +R+ KL+ + N++ D Sbjct: 447 KLTLSGINTAKHYPAWPAKLEGVITTRGSLYGGSWQMRVPELKLKGNVRNNAVSADGSLS 506 Query: 306 --KVSQDEENLLNFSENGAESMHD 327 +Q + + Sbjct: 507 GNSYNQWDIPGIKLVLGRNNLNLK 530 >gi|301155256|emb|CBW14721.1| conserved protein [Haemophilus parainfluenzae T3T1] Length = 1297 Score = 37.6 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 96/310 (30%), Gaps = 27/310 (8%) Query: 75 EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134 + E E + + + L G+ + + + ++ N + + + Sbjct: 750 AGKNGEVPFELKRINLDLVNKLMGQDTLKGQLQSRGKVAWFTDKPLQLNVAVEGNNIGVA 809 Query: 135 HNVILEKIHVKGGRIKI-IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193 + + ++ + D +++ + SD+N+Q I + L I+ + G Sbjct: 810 QKLDYRTFKLDIPKLSVNADIQNNNLTLKSDINVQNQG---RIGTDLKINDLSKGRQLGG 866 Query: 194 TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253 T + R + ++ + + GNL ++P+ +G F + Sbjct: 867 TFAIEGLRLSLANQLFSSGESIDGEVV---------SRLSFGGNL----EKPLLNGNFDI 913 Query: 254 AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313 +KL +L +++ F + + P+S + + + + + Sbjct: 914 RNVKTKLKSLPFDVTDGQVAIRFNGTSSTL-----NGHVQTPDSKLNINGQA--NWANID 966 Query: 314 LLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK---EEKDNSHDKENQ 370 ++ + + N + S N +N Sbjct: 967 NWTAEVRAQADNFKVDIPSMAKLKVSPNVVVKASPKLLDLSGNVDIPWARIAIESLPDNA 1026 Query: 371 ENFSGDKMIL 380 E S D++IL Sbjct: 1027 EPVSEDEVIL 1036 >gi|253687389|ref|YP_003016579.1| hypothetical protein PC1_0994 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753967|gb|ACT12043.1| hypothetical protein PC1_0994 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 4874 Score = 37.6 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 32/342 (9%), Positives = 91/342 (26%), Gaps = 28/342 (8%) Query: 34 EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93 I G + V + +HI PS+ + ++ + Sbjct: 557 HTLTASVQGISGNTVTVDHTLDVHINTLPSITLTP---PFTDGILNAAEAAQDQV-IRGE 612 Query: 94 PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIID 153 ++G + + I ++ + G K + + + + + + + D Sbjct: 613 TGINGRGQTVSLTIGGNYVTGTVDVNGNWTVTIPKDILQSLPSDNVSVLEI-----VVRD 667 Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213 ++ ++++ + LN+ + D + G + ++ Sbjct: 668 IAGNETTVTQNISVDTTPPTLNVSAIAQDDVLNG-----AELAVNQV-----VSGTASLS 717 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS 273 + + L Y + GN + + + + + ++ Sbjct: 718 EAGRVVTVALNDKTYTTTVGSDGNWSITLPTADL-VAIADGNHNLTVTLTDTAGNTTTVT 776 Query: 274 GNFKISDGNVRISRYKLQSILPNSSTD-EDNKTKVSQDEE-------NLLNFSENGAESM 325 I G + ++ ++ D + K + ++ S NG + Sbjct: 777 RPLTIDSGATTAPTITINNVADDNVIDGAEAKVSLQLSGTTTNVEAGQVVTISLNGKTYL 836 Query: 326 HDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367 + + L SVN + N+ Sbjct: 837 ATVQSGGVWSVNVSTADIALLADGAHSISVNVSNKAGNAASG 878 >gi|222109537|ref|YP_002551801.1| hydrophobe/amphiphile efflux-1 (HAE1) family transporter [Acidovorax ebreus TPSY] gi|221728981|gb|ACM31801.1| transporter, hydrophobe/amphiphile efflux-1 (HAE1) family [Acidovorax ebreus TPSY] Length = 1048 Score = 37.6 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 38/353 (10%), Positives = 88/353 (24%), Gaps = 45/353 (12%) Query: 3 RRVLIGLGFLFSVVLVGA-----------FTVPLFID-------------WTDFREDFER 38 R + + +F +V+ P I + ER Sbjct: 8 RPIFAWVIAIFIMVIGAVSITQLPVAQYPTVAPPTIQVTVAYPGATAQTLEDNVLSVIER 67 Query: 39 QATLIVGK-------KIAVKGGIKIHILPFPSVFFKDIRIDQK-EDGSFESKIEGLSMRA 90 + G + G I + P + + + + + Sbjct: 68 EMNGATGLAYMETTSQANGTGTIVLSFEPGTNDDLAQVDVQNRLSRATPRLPAAVTQQGV 127 Query: 91 EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIK 150 S + + D P +N + + + + + + Sbjct: 128 RVEKSRSNFLLFSILTSDNPDINIDALNDYAARNVVPELQRLPGVG-GVTQFGSERAMRI 186 Query: 151 IIDQE--SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208 ID L +N I A+ + + + + + G + K Sbjct: 187 WIDPAKLKGFNLSLDQVNASIRAQNVQVSAGNLGELPSPA------GQTISATIVVKGQL 240 Query: 209 NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268 + P + + L+ + L Y+ + G S + ++L++ Sbjct: 241 STPEEFGNVILRANTDGST----VRLKDVARIELGAQTYNFSGRLNGSPSVGMGVQLTSS 296 Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321 + L+ + + RY Q + D VS ++ G Sbjct: 297 ANALATADAVKSKLAELQRYFPQGVAYTIPYDTSTFISVSIEKVVYTLLEAIG 349 >gi|238761739|ref|ZP_04622713.1| hypothetical protein ykris0001_12640 [Yersinia kristensenii ATCC 33638] gi|238699853|gb|EEP92596.1| hypothetical protein ykris0001_12640 [Yersinia kristensenii ATCC 33638] Length = 1281 Score = 37.6 bits (85), Expect = 3.8, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 105/344 (30%), Gaps = 47/344 (13%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71 F PL + DFR + Q I G+++ + G + I + + I Sbjct: 239 LFAQPLLPELPDFRLPLDLQIKAISGQQLRLTGDTDVLITSVLLQASTQANRIILNTLDI 298 Query: 72 DQKED----GSFESKIEGLSMRAEFLPLLSGEIRVFD---MYIDQP---HLNFYLSSKGV 121 + + + + L+ E + + + L L+ G Sbjct: 299 KSPQGTLSAQGEATLADKWPLSMTVNSGLNIEPLKGERVKLTVGGALREQLKVALNLSGP 358 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + T + + + ++ +++ + + L +L ++++ + + + Sbjct: 359 VSAQLEAETALAQAGLPMA-LTLQSKQLRWP-LSGEPQFQLDNLRMRLNGQATDYALSIR 416 Query: 182 IDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDLF 235 D +G GN + ++ N ++ + +++ ++ L Sbjct: 417 SDFKGTDLPPAIFTLDGKGNVEQFNLT-RLRLAALQGNTDLTGVVDWSKAISWNSVLTLS 475 Query: 236 G---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281 G W E G G L L+ + K++R++ ++ G Sbjct: 476 GINTAKQWPEWPAKLDGKIVTRGSLHGGSWQLQVPELTLDGNVKQNRVTARGSLTGNAAG 535 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325 I L + D ++ LL+ + + + Sbjct: 536 QWHIPGINLALGR--NKLDVKG----DLNDNWLLDANVDAPQLD 573 >gi|256846325|ref|ZP_05551782.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] gi|256718094|gb|EEU31650.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] Length = 495 Score = 37.2 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 8/109 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++ IG+ LF VV+V +E ER+ + + + G + + Sbjct: 1 MKK-FIGILLLFIVVIVTVLYFARDF---LLKEYLERKMSKANNAPVTI-GSVDLDYF-E 54 Query: 62 PSVFFKDIRI-DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 V KDI++ I+ L E I D I Sbjct: 55 SYVTLKDIKVMSNLHKDEIFISIDELKSYYEI-DFSKKVITFDDTEISG 102 >gi|89052735|ref|YP_508186.1| hypothetical protein Jann_0244 [Jannaschia sp. CCS1] gi|88862284|gb|ABD53161.1| protein of unknown function DUF490 [Jannaschia sp. CCS1] Length = 1206 Score = 37.2 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 31/249 (12%), Positives = 76/249 (30%), Gaps = 21/249 (8%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 + R L+ L + A D T E Q + +++++ G Sbjct: 1 MIRFLLILALSLCPIAAAA-----QDDGTTLSRLLEDQLSDGDDRQVSITG---FRGALS 52 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 + + I + +E + LL GE+RV ++ + + Sbjct: 53 SEATLERMTISDADG--VWLVLEDAVLDWTRSALLRGELRVDELTAARLEVIRPPLPVEG 110 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + ++ + ++ + V+ GRI + + + L++ + Sbjct: 111 VDLADTEAQPFSLPDLP---VRVEIGRIAVEEVVLGEPI-------IGLPASLSVEGSVR 160 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + G + D F + A + + + L + L + +L G Sbjct: 161 LAGGAGEALITLD-RLDGPAGQFVLDATYDNATRNLDLSLLLEEADGGLAAELLGLPGRP 219 Query: 242 EKQPIYSGV 250 + + +G Sbjct: 220 DVRLAVAGS 228 >gi|325917261|ref|ZP_08179484.1| filamentous hemagglutinin family N-terminal domain [Xanthomonas vesicatoria ATCC 35937] gi|325536522|gb|EGD08295.1| filamentous hemagglutinin family N-terminal domain [Xanthomonas vesicatoria ATCC 35937] Length = 2153 Score = 37.2 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 37/356 (10%), Positives = 95/356 (26%), Gaps = 19/356 (5%) Query: 44 VGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-----G 98 G I V + + DI + + S I + S G Sbjct: 1380 TGNGITVTDRNTLSVSSIAGNTSGDIALTAQTLNLPASAISAGTGTLSLTATGSAFSTGG 1439 Query: 99 EIRVFDMYID---QPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE 155 + ++ +D L +++ ++ + +++ I I Sbjct: 1440 TLSGGNVVLDARDGLTLAHDITAGNLTLRTTNTAINQTAGQLVVGGITDANAGSAAIALT 1499 Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215 + + + + + + + G + G + + N Sbjct: 1500 GNNDFQTTVTLTGGAVQLNDRNALTLGTHNTGPLTVTSNGALSLGQGTVNGPLIANSTNG 1559 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN---LELSAKKSRL 272 I L + G + N + G +AG+ + + L +S+ Sbjct: 1560 TIGQTGALTINGTSTLNAGNGAITLNNANNDFQGAVGLAGNGITVTDRNTLSVSSIAGNT 1619 Query: 273 SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV---SQDEENLLNFSENGAESMHDLN 329 G+ ++ + + + + S + N++ + +G HD+N Sbjct: 1620 GGDIALTAQTLNLPASAISAGTGTLSLTATGSAFSTGGTLSGGNVVLDARDGLTLAHDIN 1679 Query: 330 --ETDFFEEEEKKNKND---DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMIL 380 N+ + + ++D +N +G + L Sbjct: 1680 AGNLTLRTTNAAINQTAGQLTVGGTTEANAGTAAIALAGNNDFQNAVTLTGGAVQL 1735 >gi|149197241|ref|ZP_01874293.1| hypothetical membrane protein [Lentisphaera araneosa HTCC2155] gi|149139787|gb|EDM28188.1| hypothetical membrane protein [Lentisphaera araneosa HTCC2155] Length = 614 Score = 37.2 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 36/321 (11%), Positives = 96/321 (29%), Gaps = 18/321 (5%) Query: 21 FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED-GSF 79 F F+ + + E+Q T G ++ + +K + S+ + + + D Sbjct: 201 FAAEFFLMESIMKSQLEKQLTRANGAEVNIA-DLKFSMG-QGSLTIQGLEVTDSSDLSKN 258 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVIL 139 +I+ +++ + LL V + +D +S G + K + Sbjct: 259 SVQIKDIALDLQMSDLLRSRAVVELLKVDIVEFGMVRASPGKDYDSKSKKEEEPPKEQEK 318 Query: 140 EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS-----PLSIDSIKGSVIAEGT 194 +K +++ + F + + + + + P+ I AE Sbjct: 319 DKEGEFDLN-TYLNKAEEYKRFYDKVKEYLKNKEQSAEAKAENKPVKITKEDLRKKAEKL 377 Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254 G + + + I+ +Y + I + +P+ ++ Sbjct: 378 GFLNLRARELYQNVAAWHVKQTSVSNIKTDSRSYTMEISDMSSHPVIVGKPVL---VNLG 434 Query: 255 GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ----- 309 + N L+ + + K+ +++ + + ++ D Sbjct: 435 DGKNIEANSTLNVHQLNAQNSLKVKVTDLK-RKEDIDFGEDTAAILRDGDMSFDLEGTFS 493 Query: 310 DEENLLNFSENGAESMHDLNE 330 +E L F D+ Sbjct: 494 AKEINLPFMLKLRNLNVDVRP 514 >gi|91216464|ref|ZP_01253430.1| hypothetical protein P700755_02892 [Psychroflexus torquis ATCC 700755] gi|91185258|gb|EAS71635.1| hypothetical protein P700755_02892 [Psychroflexus torquis ATCC 700755] Length = 824 Score = 37.2 bits (84), Expect = 4.3, Method: Composition-based stats. Identities = 24/226 (10%), Positives = 58/226 (25%), Gaps = 5/226 (2%) Query: 96 LSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE 155 ++ + F + + F ++ + ++ E K ++I+ Sbjct: 347 YEFNPQLTKKDFSNAIITFDEEANTKDSLFWEQNRPVPLTSLEQEDYTFKD-SLQILKNS 405 Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKN 214 + ++ + G + + N F I + + Sbjct: 406 QPYKDSIDTVSNTFKVTDPLFGYSWQNSTTNQEAGFTGLTDLNYNTVQGFNIKSGVYFRQ 465 Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274 K + + + I DL +P ++ L + K ++ Sbjct: 466 KDTAGTFRT---YWEIRSDLDYGFSEETLRPSFTFTKKFNNFSKPFLIISGGVKAEEINS 522 Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320 I++ I+ + K SQD N S Sbjct: 523 TNPINERLSSIASVFFERNYLKLFERIFGKATYSQDVFNGFRLSAE 568 >gi|94500908|ref|ZP_01307434.1| hypothetical protein RED65_11730 [Oceanobacter sp. RED65] gi|94427027|gb|EAT12009.1| hypothetical protein RED65_11730 [Oceanobacter sp. RED65] Length = 2033 Score = 37.2 bits (84), Expect = 4.4, Method: Composition-based stats. Identities = 21/192 (10%), Positives = 47/192 (24%), Gaps = 12/192 (6%) Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178 N +Q V ++ G D L+D+N + F Sbjct: 354 DSKGNVYQFPYGGFAFPVVDAGDYRIQIGESPYYDYPISTQKSLADINALTNGPFNFDEQ 413 Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAF----KITANFPAKNKAISLKIQLFPLAYPIIIDL 234 + + D K + N + ++ +IQ+ P ++ Sbjct: 414 GSRALAFNSGITFRMDVPLDPKDNTVLLTKTANKNSAGIGELVAYRIQIENTEIPGT-NI 472 Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GNFKISDGNVRISRYKLQSI 293 + +G + G+ + + + G+ + LQ + Sbjct: 473 KIEDRLPQGFRYVAGSAQLNGNQLVDPTISADGQLLSFNIGDLAVE------ESLTLQYL 526 Query: 294 LPNSSTDEDNKT 305 S Sbjct: 527 TRISVNTPVGTA 538 >gi|296129824|ref|YP_003637074.1| pyruvate kinase [Cellulomonas flavigena DSM 20109] gi|296021639|gb|ADG74875.1| pyruvate kinase [Cellulomonas flavigena DSM 20109] Length = 478 Score = 37.2 bits (84), Expect = 4.5, Method: Composition-based stats. Identities = 17/164 (10%), Positives = 42/164 (25%), Gaps = 2/164 (1%) Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127 D+ + G E + + SG + + P + +G + Sbjct: 29 DVARLNRSHGDTEVH-KRVYDNVRAAAKASGRSVAVLVDLQGPKIRLGRFVEGKHDLAVG 87 Query: 128 KSTMDMIHNVILEKIHVKGGRIKI-IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186 + K V + D + + D + + +N ++ + Sbjct: 88 DVFTITTDEIEGTKERVSTTFKGLPGDVKPGDPILIDDGKVLVRVTEVNGNDVVTRVEVP 147 Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 G V N + + + +L + +A Sbjct: 148 GPVSNNKGLNLPGVAVSVPAMSEKDEDDLRWALNVGADLIALSF 191 >gi|145224175|ref|YP_001134853.1| pyruvate kinase [Mycobacterium gilvum PYR-GCK] gi|315444510|ref|YP_004077389.1| pyruvate kinase [Mycobacterium sp. Spyr1] gi|145216661|gb|ABP46065.1| pyruvate kinase [Mycobacterium gilvum PYR-GCK] gi|315262813|gb|ADT99554.1| pyruvate kinase [Mycobacterium sp. Spyr1] Length = 472 Score = 37.2 bits (84), Expect = 4.5, Method: Composition-based stats. Identities = 13/148 (8%), Positives = 38/148 (25%), Gaps = 11/148 (7%) Query: 89 RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR 148 R +G + P + + G + W + ++ R Sbjct: 50 RVRAASDATGRAVGILADLQGPKIRLGRFADGPTVW-----RNGETIRITVDDFEGTHDR 104 Query: 149 IK------IIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202 + D + D N+ + ++ + + G V + Sbjct: 105 VSTTYKRLAQDATPGDRVLVDDGNVGLVVEHIDGNDVVCTVTEGGKVSNNKGMSLPGMNV 164 Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPI 230 + + + +L++ + +A Sbjct: 165 SAPALSEKDIDDLEFALRLGVDLVALSF 192 >gi|194333772|ref|YP_002015632.1| hypothetical protein Paes_0942 [Prosthecochloris aestuarii DSM 271] gi|194311590|gb|ACF45985.1| conserved hypothetical protein [Prosthecochloris aestuarii DSM 271] Length = 373 Score = 37.2 bits (84), Expect = 4.5, Method: Composition-based stats. Identities = 37/295 (12%), Positives = 88/295 (29%), Gaps = 44/295 (14%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTD-----FREDFERQATLIVGKKIAVKGGIKI 56 +++ L LF+ ++ +T +DW +R + + + L + + +++ Sbjct: 1 MKKFLT----LFAFLVAAGWTNAQAVDWNWKGDVRYRYEIQDKEELDDNRD-RHRLRVRL 55 Query: 57 HILPFPSVFFK-DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115 + P+ + ++I G + + +LN Sbjct: 56 GVYPWINEELSAGVQISTAGAGDP---------------VSRNQTLGDGFTAKDFNLN-- 98 Query: 116 LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175 + ++ MD N++L K VK I++ D D L L Q Sbjct: 99 ---EAFIDFHPMSYGMDGKVNLLLGKREVKSTLIRVNDLVWDSDLTLEGLTFQFGKDGSK 155 Query: 176 IISPLSI-----------DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224 S ++ S G + + + + Sbjct: 156 QKSGFNVVAGYYFIDELSSSEDDPFFWAVQGAYTGEAGPLGFMIGAGYYDFQNVQYMDAS 215 Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 L D FGN ++ + +Y +++ F+ + + G + ++ Sbjct: 216 VLGDWADEDNFGNSAYSYDEYLYD--YNILELFANIGGKFNGDLPWKAYGQYAVN 268 >gi|120403808|ref|YP_953637.1| pyruvate kinase [Mycobacterium vanbaalenii PYR-1] gi|119956626|gb|ABM13631.1| pyruvate kinase [Mycobacterium vanbaalenii PYR-1] Length = 472 Score = 37.2 bits (84), Expect = 4.5, Method: Composition-based stats. Identities = 13/143 (9%), Positives = 42/143 (29%), Gaps = 1/143 (0%) Query: 89 RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR 148 R +G + P + + G + W ++ + + + V Sbjct: 50 RVRAASDATGRAVGILADLQGPKIRLGRFADGPTMWANGETVRITVEDFVGNHDRVSTTY 109 Query: 149 IKI-IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207 ++ D + + D N+ + ++ + + G V + + Sbjct: 110 KRLAQDAKPGDRVLVDDGNVGLVVEHIDGNDVVCTVTEGGKVSNNKGMSLPGMNVSAPAL 169 Query: 208 ANFPAKNKAISLKIQLFPLAYPI 230 + + +L++ + +A Sbjct: 170 SEKDIDDLEFALRLGVDLVALSF 192 >gi|321257840|ref|XP_003193726.1| hypothetical protein CGB_D6440W [Cryptococcus gattii WM276] gi|317460196|gb|ADV21939.1| conserved hypothetical protein [Cryptococcus gattii WM276] Length = 818 Score = 37.2 bits (84), Expect = 4.7, Method: Composition-based stats. Identities = 26/233 (11%), Positives = 63/233 (27%), Gaps = 11/233 (4%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFRED-FERQATLIVGKKIAVKGGIKIHILP 60 +RR+++ + ++++ A + + R + A+ ++ ++ LP Sbjct: 1 MRRLILAVPHTLVLIVIKALAAAMCVQSIKSRRLSIDSTASSRKLSSSSITTASEVRPLP 60 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 + + + GL + G I + N G Sbjct: 61 S-------VTLPGPSHLFPPLQSAGLPIDPSEDSTNPGRIPDETQNVLGLDTNLQRQQHG 113 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 + S + + G ID S V S + I ++S Sbjct: 114 LFPSSPSSSNTPSGTTQFIGQSTPGSG---FIDPASLNVASSSAIENLIDIPTDAMLSTP 170 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233 +I S + + + + + N + + + D Sbjct: 171 AIPSYPELLTFDPSWEWFGNLFGWGSDTNIDLDVGLQNSMFESNGVGPASSTD 223 >gi|298528941|ref|ZP_07016344.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510377|gb|EFI34280.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] Length = 951 Score = 37.2 bits (84), Expect = 4.8, Method: Composition-based stats. Identities = 32/321 (9%), Positives = 94/321 (29%), Gaps = 33/321 (10%) Query: 20 AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF 79 ++P ++ ++ ++ + P + DIR + Sbjct: 40 YISLPFILER-----FLVSYMQDQGIQEAQIRVD---SVGPR-GIHLSDIR-----GENL 85 Query: 80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI----H 135 +++ +++R + L+ G + + + + +G+ K Sbjct: 86 GLEVDRVAVRLGWSSLMQGR--ADRIVVTGLNWRAGYTPEGLDLGLPFKGDDRERELAVP 143 Query: 136 NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195 + + + ++ + LS + + NI + + ++ +G Sbjct: 144 ALPFDVLELQSSSFLMEYAGLGWRVPLSGV--VQAGDVKNIRAEFETRLLGSALQIKGLA 201 Query: 196 NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN-EKQPIYSGVFSVA 254 + ++ R+ I +++P + SL Q PL + + G L + + Sbjct: 202 DLESGRADVSIQSSWPEDERFESLPRQGLPLQAELSLTWAGGLDDPGDGCIDFYAELGRQ 261 Query: 255 GDFSKLLNLELSAKKSRLSGNFK----------ISDGNVRISRYKLQSILPNSSTDEDNK 304 L L G F + +++ ++ I + Sbjct: 262 HLTLAGTKFGLDRAALNLQGTFDGFSRDSLQAGVQLEGLKLGDFQFAGIDMLLKDRGVSS 321 Query: 305 TKVSQDEENLLNFSENGAESM 325 + ++ + L+ G Sbjct: 322 MQARLEKPDRLDLDLTGTHED 342 >gi|148244242|ref|YP_001218936.1| hypothetical protein COSY_0076 [Candidatus Vesicomyosocius okutanii HA] gi|146326069|dbj|BAF61212.1| hypothetical protein [Candidatus Vesicomyosocius okutanii HA] Length = 266 Score = 37.2 bits (84), Expect = 4.8, Method: Composition-based stats. Identities = 24/267 (8%), Positives = 74/267 (27%), Gaps = 28/267 (10%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++++ L L ++++ V I ++ ++ A I+ I + Sbjct: 1 MKKIGYFLIGLIVILVLIMMLVFDSIG----KKYVQKYAQNILRTPITIS-QFSSSFWDK 55 Query: 62 PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119 + I + + ++ ++ L I + ++ D H + Sbjct: 56 -RLNIDFIEVQNPPNFNNKDAFYLDHFVLKIGDDTTLDL-IVIDELSFDGMHFILEQNKT 113 Query: 120 GVS----------------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163 V+ ++ + + + + +V +KI + + + Sbjct: 114 NVNLVTLIDNLGKSSNNTTLSSSEETHGVIDKRIKINQFNVINTTLKIDTKWLKETIKVP 173 Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF---KITANFPAKNKAISLK 220 ++NLQ I + V+ + K +I + +++ Sbjct: 174 NINLQKFGGNSGITLNKVGQELMEIVLNNLEDALEKKGIELGEKEIKETLIQRLWINNIQ 233 Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIY 247 + +D + Sbjct: 234 ENFKLDKFKESLDFSETKKLQNQAKDL 260 >gi|218460859|ref|ZP_03500950.1| sugar ABC transporter, permease protein [Rhizobium etli Kim 5] Length = 223 Score = 37.2 bits (84), Expect = 4.9, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 4/75 (5%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFER---QATLIVGKKIAV-KGGIKIHILP 60 + + +G L +V+ +P F+D + + +G+ + GG+ + + Sbjct: 17 IGLSIGTLLVMVVASVILLPDFMDPENLSNLLAQSTVLVISALGQTFVILTGGLDVSVGS 76 Query: 61 FPSVFFKDIRIDQKE 75 S+ + +D E Sbjct: 77 VISLTTTIMTLDLPE 91 >gi|325576965|ref|ZP_08147536.1| hypothetical protein HMPREF9417_0277 [Haemophilus parainfluenzae ATCC 33392] gi|325160923|gb|EGC73042.1| hypothetical protein HMPREF9417_0277 [Haemophilus parainfluenzae ATCC 33392] Length = 1299 Score = 37.2 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 40/346 (11%), Positives = 105/346 (30%), Gaps = 34/346 (9%) Query: 37 ERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL 96 ++ +G + + + P + E E + + + L Sbjct: 725 NKKIQATIGSHCWINQDLDLC-FPQ----------QFTAGKNGEVPFELKRINLDLVNKL 773 Query: 97 SGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI-IDQE 155 G+ + + + ++ N + + + + + ++ + D + Sbjct: 774 MGQDTLKGQLQSRGKVAWFTDKPLQLNVAVEGNNIGVAQKLDYRTFKLDIPKLSVNADIQ 833 Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215 ++ + SD+N+Q I + L I+ + GT R + ++ Sbjct: 834 NNNLTLKSDINVQNQG---RIGTDLKINDLSKGRQLGGTFTIGGLRLSLANQLFSSGESL 890 Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 + + GNL ++P+ +G F + +KL +L +++ Sbjct: 891 DGEVV---------SRLSFGGNL----EKPLLNGNFDIRNVKTKLKSLPFDVTDGQVAIR 937 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335 F + + P+S + + + + + D+ + Sbjct: 938 FNGTSSTL-----NGHVQTPDSKLNINGQANWAHMDNWTAEVRAQADNFKVDIPSMAKLK 992 Query: 336 EEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK-ENQENFSGDKMIL 380 K D+ +V+ + +N E S D++IL Sbjct: 993 VSPNVVVKASPKLLDLSGNVDIPWARIAIESLPDNAEPVSEDEVIL 1038 >gi|325926166|ref|ZP_08187526.1| hypothetical protein XPE_1492 [Xanthomonas perforans 91-118] gi|325543430|gb|EGD14853.1| hypothetical protein XPE_1492 [Xanthomonas perforans 91-118] Length = 816 Score = 36.8 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 28/278 (10%), Positives = 75/278 (26%), Gaps = 34/278 (12%) Query: 36 FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE----------DGSFESKIEG 85 Q + +++ ++G ++ + F + + I + Sbjct: 231 VAEQVQAVSLRQLHIEGQGQLQLGLFKQLRGGPMEIFPSHAVFESARVRWGQDEVMRNGQ 290 Query: 86 LSMRAEF----------LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH 135 L + A L +L + ++ D L+ ++G R Sbjct: 291 LRIDASIARHAPDQASGLAVLQLTDALIAVHGDTAALDVTRHAQGRHTLATRAGKGRADG 350 Query: 136 NVILEKIHVKGG-----RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190 + + ++ G R + D L +L Q+ + + + Sbjct: 351 ELRWIRGALQPGSQLQWRAPLHDSTRTPAALLGELTAQLQVDQDMRLKVSMPEPADAGLT 410 Query: 191 AEGTGNFDNKRSAF-KITANFPAKNKAISLKIQLFPLAYPI-------IIDLFGNLFWNE 242 + ++ + + P + L QL L + + L G + Sbjct: 411 LDADLRVQGRQLPVQSMRSLLPRTSGHARLHWQLSSLRWIAALFPDVDWLTLEGEGLVDA 470 Query: 243 KQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKIS 279 I G + + ++ ++ ++G Sbjct: 471 DLRIDHGQLAAGSRLQVPHVHAQVGVMGHAITGQASAD 508 >gi|304389366|ref|ZP_07371331.1| non-specific serine/threonine protein kinase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327484|gb|EFL94717.1| non-specific serine/threonine protein kinase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 663 Score = 36.8 bits (83), Expect = 5.7, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 69/222 (31%), Gaps = 33/222 (14%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFRED---FERQATLI----VGKKIAVKGGIK 55 R LIG V+L T +R +Q + + + + Sbjct: 373 RWFLIGGIIGAIVLLAAILTWFFMWGPGSYRPMVDVVNQQWSDASKSLTAADVTFE---R 429 Query: 56 IHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAE------FLPLLSGEIRVFDMYIDQ 109 + + +V ++ G + + + +P L+G+ + + + + Sbjct: 430 VDVFDD-NVPAGNVARTDPAPGKPLGRFQKAKIFVSKGVEMLTMPDLTGKTQEEALELVK 488 Query: 110 ------PHLNFYLS---SKGVSNWFQRKSTMDMIHNVILEKIHVKGGR--IKIID----Q 154 P ++ +G + Q + + + + K+ V GR + ++D Sbjct: 489 KARFNAPQVSEEFHDTVPEGQVS-AQDPAPNASVPHNTIVKVTVSKGRQPVTMLDLVGKP 547 Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196 S+ L+ + LQ + I SV T + Sbjct: 548 GSEAQSELTKVGLQPQVKEEFSDGVPKGKVISQSVAPNTTLH 589 >gi|119471771|ref|ZP_01614131.1| hypothetical protein ATW7_08971 [Alteromonadales bacterium TW-7] gi|119445394|gb|EAW26682.1| hypothetical protein ATW7_08971 [Alteromonadales bacterium TW-7] Length = 1229 Score = 36.8 bits (83), Expect = 5.7, Method: Composition-based stats. Identities = 40/368 (10%), Positives = 104/368 (28%), Gaps = 30/368 (8%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60 +L+++ + + +++ F + F + + +I G Sbjct: 3 ILKKITATVSAILVSLIISVFCLLFTAPGNQFIAYTANKVVDGLHIEIK-DGR------- 54 Query: 61 FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120 F ++R ++ + I V ++ L + + Sbjct: 55 FIYNDAFNVRFKNNG-----LDFNAQQLKIDLFWWQCDGICVDNLSAKSIKLTLPKTVEA 109 Query: 121 VSNWFQRKSTMDM-IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL---NI 176 NV ++ I V + +D L+ + L ++ Sbjct: 110 QDETPSEPLEKITLPFNVSIKNIAVN--EFTLNHPSADVSVNNFKLSAKAEGSKLTVKSL 167 Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236 P + ++K + ++A P + + + L + G Sbjct: 168 NIPSILVALKEQEQPAKAQTAQSNKAALTQLPALPDIEFTSPIDLAIEALDIAKVTIEQG 227 Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS-------DGNVRISRYK 289 + N + S SV L +L + ++ +L+ G V + + Sbjct: 228 DAQHNIEN--ISLQLSVEDAVINLQSLSATYEQWQLNTQLDAELLGNLPVKGLVTLKSDE 285 Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENG--AESMHDLNETDFFEEEEKKNKNDDLK 347 Q+ L + D + + L + N + + + + +N++LK Sbjct: 286 HQANLELNGDLADLTIHLETSGQYPLTLTANANLKQKNYPFELSGKINQWLIDAQNNELK 345 Query: 348 KDDIQYSV 355 ++ Sbjct: 346 VKNVSLKA 353 >gi|315634258|ref|ZP_07889545.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393] gi|315476848|gb|EFU67593.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393] Length = 781 Score = 36.8 bits (83), Expect = 5.8, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 85/316 (26%), Gaps = 36/316 (11%) Query: 57 HILPFPSVFFKDIR---IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113 H + +D+ I GS + +R S V + D+ L Sbjct: 147 HFWGWLRDTPEDVTNTVISVTGKGSLLQYPKNAEIRVAASDWSSKTNTVNVLVADEGQLT 206 Query: 114 FYLSS--KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL-NLQIS 170 G +N + +V K+ ++K ++D F ++ + + Sbjct: 207 AGTLRVGNGTTNIQIGDNNKAGTFDVEKIKLEENPQKVKFDFAQTDNFNFTPEMTSASPT 266 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230 + ++ + S ++ G N + + + S+K + Sbjct: 267 TKIVDFVQRGSGTTLFAPRNMSG-VNSNVNITNGTLKVGRDNAFGDASVKSNVDIGE--- 322 Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290 G N + + + N K + G++ G + + Sbjct: 323 ----KGTFELNNFNATVTNLNNKGTLDLTSENAN---KTLTVEGDYHSDGGKLIVKTTWN 375 Query: 291 QSILPNSSTDEDNKTK----------------VSQDEENLLNFSENGAESMHDLNETDFF 334 + + + K + Q EN+ + + D N F Sbjct: 376 NNNSSSDTLHIKGKATGRTIVSTRNGFIEGDVLRQARENIFSADMIKMD---DPNSEAIF 432 Query: 335 EEEEKKNKNDDLKKDD 350 E K D+ + Sbjct: 433 EGTAKTRNADEAQLAK 448 >gi|293393183|ref|ZP_06637498.1| hypothetical protein HMPREF0758_0834 [Serratia odorifera DSM 4582] gi|291424329|gb|EFE97543.1| hypothetical protein HMPREF0758_0834 [Serratia odorifera DSM 4582] Length = 1272 Score = 36.8 bits (83), Expect = 5.8, Method: Composition-based stats. Identities = 45/346 (13%), Positives = 100/346 (28%), Gaps = 46/346 (13%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70 F PL D + R + I G+++ + G + I + Sbjct: 228 ALFAKPLLPDLPEVRLPLDITVKEIRGEQLRLTGDTDVLITSLLLQASTLDHHLQLDKFD 287 Query: 71 IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN----------FYLSSKG 120 + + F L + + +G + V + ++ LN ++ G Sbjct: 288 VKSPQGTLFAHGQATLKDQWPVEMVANGTLNVEPLKGEKVKLNVGGALREALSVAMNLSG 347 Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180 T + L + ++G R++ + Y + L L+ + + + Sbjct: 348 PVGAQLDLQTQLAEAGLPLA-LTLEGKRLRWP-LSGEAQYQVDGLRLRFNGKATDYALST 405 Query: 181 SIDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235 + + +G GN + + A +L +++ + L Sbjct: 406 RANIKGQDLPPAVLTLDGKGNVEQFKLQRLRLAALQGHADLTALVDWSKAISWTSQLQLS 465 Query: 236 G---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281 G W E G + G L L+ + K++++S +S G Sbjct: 466 GINTAKQWPEWPAKLDGKITTRGSLYGGSWQLQVPTLQLDGNVKQNKVSARGSLSGNAAG 525 Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327 +I L + + + +E N + D Sbjct: 526 QWKIPAVDLALGR--NRLNVKGQL-----DEKSWNLDADIDAPQLD 564 >gi|73983823|ref|XP_855059.1| PREDICTED: similar to AHNAK nucleoprotein isoform 1 [Canis familiaris] Length = 4966 Score = 36.8 bits (83), Expect = 6.0, Method: Composition-based stats. Identities = 39/326 (11%), Positives = 98/326 (30%), Gaps = 38/326 (11%) Query: 53 GIKIHILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPL------LSGEIRVFD 104 I + P + D+ I+ E + K+ ++++A + + L G D Sbjct: 2089 DIDVS-APKVDIEVPDVSIENPEGKIKGPKFKMPEMNIKAPKISMPDVDLHLKGPKVKGD 2147 Query: 105 MYIDQPHL--NF---YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159 + + P + + + KG + L+ VK +I + Sbjct: 2148 VNVSLPKVEGDLKGPEVDLKGPKVDIDVPDVDVHGPDWHLKMPKVKMPKISM----PGFK 2203 Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG-TGNFDNKRSAFKITANFPAKNKAIS 218 ++++ + +++ P +D V EG G + + + K Sbjct: 2204 GEGPEVDVNLPKADIDVSGP-KVDVECPDVNIEGPEGKWKSPKFKMPEMHFKTPKISMPD 2262 Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG-NFK 277 + + L +D+ G P G K ++++ + G ++ Sbjct: 2263 IDLNLTGPKIKGDVDVTG--------PKLDGDLKGPEVDLKGPKVDINVPDVDVHGPDWH 2314 Query: 278 ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEE 337 + V++ ++ + + + +G + + + + E Sbjct: 2315 LKMPKVKMPKFSMPG--------FKGEGPEVDVNLPKADIDVSGPKVDIEGPDVNIEGPE 2366 Query: 338 EKKNKNDDLKKDDIQYSVNKKEEKDN 363 K K K ++ K D Sbjct: 2367 GK-LKGPKFKMPEMNIKAPKISMPDF 2391 >gi|294784592|ref|ZP_06749881.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27] gi|294487808|gb|EFG35167.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27] Length = 495 Score = 36.8 bits (83), Expect = 6.3, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 8/109 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++ IG+ LF VV+V +E ER+ + + + G + + Sbjct: 1 MKK-FIGILLLFIVVIVTVLYFARDF---LLKEYLERKMSKANNAPVTI-GSVDLDYF-E 54 Query: 62 PSVFFKDIRI-DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109 V KDI++ I+ L E I D I Sbjct: 55 SYVTLKDIKVMSNLYKDEIFISIDELKSYYEI-DFSKKVITFDDTEISG 102 >gi|168055739|ref|XP_001779881.1| predicted protein [Physcomitrella patens subsp. patens] gi|162668694|gb|EDQ55296.1| predicted protein [Physcomitrella patens subsp. patens] Length = 2019 Score = 36.8 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 15/111 (13%), Positives = 30/111 (27%), Gaps = 6/111 (5%) Query: 25 LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE 84 L++D T +G+ + + ++ SV I + I Sbjct: 17 LYMDRNIL-PPLASILTTHLGRDVRLGKVERLSF---LSVSLGTSSIGPHAEEFSCGGIP 72 Query: 85 GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH 135 + + L L V D + PH+ +W + Sbjct: 73 AIQIHFRPLKSLKRGQVVLDAVLRNPHVLVAQKRD--WSWLSIPMLSEKKP 121 >gi|187929668|ref|YP_001900155.1| hypothetical protein Rpic_2596 [Ralstonia pickettii 12J] gi|187726558|gb|ACD27723.1| protein of unknown function DUF490 [Ralstonia pickettii 12J] Length = 1304 Score = 36.8 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 46/366 (12%), Positives = 105/366 (28%), Gaps = 27/366 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR + + FL +VL A + I G V G ++ + Sbjct: 31 LRWLGGLVAFLLVIVLALAGWLVWAIHSQSGTAQL-WALATRFG-NAYVSGKLEGGTVRD 88 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 V +D+ + GS E +I+ + R + G Y+ +++ L Sbjct: 89 -GVSLRDLHVRA---GSTEVRIDHVEGR---WAITRGPWHAHFAYLRAGNVDVILHPTPP 141 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP-- 179 +++ + + ++++ V R+ I S +L N++ Sbjct: 142 IPPSGPPNSLVLPLALDVDRLAVD--RLAIRQGTSTTELKSIAGSLHTDGTHHNVLLDGM 199 Query: 180 -LSIDSIKGSVIAEGTGNFDNK-RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 + ++ GT + + + + S+ QL + ID G Sbjct: 200 ETPAGKLAATLRMTGTRPYPLTGAATLATQFEVNGQKQDASVSAQLSGSLETLHIDATGT 259 Query: 238 LFWNEKQPIYS----GVFSVAGDFSKLLNLELSA---KKSRLSGNFKISDGNVRISRYKL 290 Q + G ++ ++ A S + K Sbjct: 260 GAKLTAQALIDATPFGALPLSRAVVSAEHVNPRAFAPGAPEASLSIHADLR----PDEKA 315 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350 +++ + DN + ++ L A+ + N+ + + L Sbjct: 316 KTLTVAGPIEIDN-AQPGTLDKQKLPLQSLRAQVRLNENDQQLTGLDVRLLGGAVLTGGA 374 Query: 351 IQYSVN 356 + Sbjct: 375 DVQKGH 380 >gi|37528372|ref|NP_931717.1| hypothetical protein plu4553 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787810|emb|CAE16925.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 1257 Score = 36.4 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 30/308 (9%), Positives = 85/308 (27%), Gaps = 47/308 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++V I + +++++ + G + +P Sbjct: 4 MKKVSIAFLLIVTLLVIAVAGL----------------VGTQSGLHFMINS--AARWVPG 45 Query: 62 PSVF-----FKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 + ++D+ + + ++ L + L ++ V + + + Sbjct: 46 LDITSVSGGWRDLTLKGVKYQMPGVNVNVDQLHLSLRLSCLKKSQLCVNALTTEGVKVAI 105 Query: 115 ---YLSSKGVSNWFQRK-STMDMIHNVILEKIHVKGGRIKIID--------------QES 156 L G + + + + V L+ + VK + + D Q+ Sbjct: 106 NTKQLPPAGEPSPKSEPFTELRTPYPVSLDLLSVKNVTVTVNDTIFALDEFRTAAHWQQK 165 Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG---TGNFDNKRSAFKITANFPAK 213 + +N + L I +G + + F Sbjct: 166 ALTLKPTKINGLLVELPKTPPERLKIAEAEGKAKRGSEPEKSLAEILKKLFSQPLLATLP 225 Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS 273 I L I + ++ + L G+ Q + LN+++ ++ Sbjct: 226 EVPIPLDITVAGISGK-QLRLTGDTNITINQFLLQLSNQGQQIQLNKLNVKMPEGSLAIN 284 Query: 274 GNFKISDG 281 G+ ++ Sbjct: 285 GSATLAQQ 292 >gi|309781564|ref|ZP_07676299.1| signal peptide protein [Ralstonia sp. 5_7_47FAA] gi|308919669|gb|EFP65331.1| signal peptide protein [Ralstonia sp. 5_7_47FAA] Length = 1302 Score = 36.4 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 46/366 (12%), Positives = 105/366 (28%), Gaps = 27/366 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 LR + + FL +VL A + I G V G ++ + Sbjct: 29 LRWLGGLVAFLLVIVLALAGWLVWAIHSQSGTAQL-WALATRFG-NAYVSGKLEGGTVRD 86 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 V +D+ + GS E +I+ + R + G Y+ +++ L Sbjct: 87 -GVSLRDLHVRA---GSTEVRIDHVEGR---WAITRGPWHAHFAYLRAGNVDVILHPTPP 139 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP-- 179 +++ + + ++++ V R+ I S +L N++ Sbjct: 140 IPPSGPPNSLVLPLALDVDRLAVD--RLAIRQGTSTTELKSIAGSLHTDGTHHNVLLDGM 197 Query: 180 -LSIDSIKGSVIAEGTGNFDNK-RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 + ++ GT + + + + S+ QL + ID G Sbjct: 198 ETPAGKLAATLRMTGTRPYPLTGAATLATQFEVNGQKQDASVSAQLSGSLETLHIDATGT 257 Query: 238 LFWNEKQPIYS----GVFSVAGDFSKLLNLELSA---KKSRLSGNFKISDGNVRISRYKL 290 Q + G ++ ++ A S + K Sbjct: 258 GAKLTAQALIDATPFGALPLSRAVVSAEHVNPRAFAPGAPEASLSIHADLR----PDEKA 313 Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350 +++ + DN + ++ L A+ + N+ + + L Sbjct: 314 KTLTVAGPIEIDN-AQPGTLDKQKLPLQSLRAQVRLNENDQQLTGLDVRLLGGAVLTGGA 372 Query: 351 IQYSVN 356 + Sbjct: 373 DVQKGH 378 >gi|152989158|ref|YP_001348055.1| hypothetical protein PSPA7_2695 [Pseudomonas aeruginosa PA7] gi|150964316|gb|ABR86341.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 1221 Score = 36.4 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 37/343 (10%), Positives = 89/343 (25%), Gaps = 40/343 (11%) Query: 75 EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134 + +E ++ L S + + + ++ L S G + T+ + Sbjct: 63 AQDGTQLVLERPALDWSPGCLASLRLCLKRVAAERVELILPPSDDGAPSGPVELPTLQLP 122 Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 +V L ++ + + +Q +D L + L ++G + G Sbjct: 123 LSVELGEVAIGSFLLDGNEQVADLDLSARWLADGLHIDALKARGFGLSLELRGRLQPSGD 182 Query: 195 GNFD-----------NKRSAFKITANFPAK-------------NKAISLKIQLFPLAYPI 230 K + + + ++ ++Q P Sbjct: 183 WPLQAEAAVGLPAPEGKPWNLAVQVGGELQKALTLKGRSSGYLDGSLEGQLQALAENLPA 242 Query: 231 II-----DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS------RLSGNFKIS 279 + G + + + GD + A LS + ++ Sbjct: 243 RLLIRADGFKGAAGLPDTLTLNAIQLDAGGDLKSGYLIRGGASLPGEGGAVALSLDGRVD 302 Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM-HDLNETDFFEEEE 338 I + +L + D ++ E + + + + L Sbjct: 303 ALGADIRQLRLDAG---GEQRLDLVGRLDWRESLAADATLDWQDFPWLRLYPLAEPPPVT 359 Query: 339 KKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQEN-FSGDKMIL 380 K ++ D +Y N + SGD + L Sbjct: 360 LKTFKAEVHYQDQRYLGNFSAAASGPAGDFTLASPVSGDLVQL 402 >gi|260591071|ref|ZP_05856529.1| conserved hypothetical protein [Prevotella veroralis F0319] gi|260536936|gb|EEX19553.1| conserved hypothetical protein [Prevotella veroralis F0319] Length = 1708 Score = 36.4 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 31/330 (9%), Positives = 93/330 (28%), Gaps = 58/330 (17%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +R ++ + + L+ + + + G ++++ ++++ Sbjct: 7 MRWLVAIVATPVVLFLLLVVLLYCPPVQNWAVKQVATYVSNHTGMRVSID---RVNLSYP 63 Query: 62 PSVFFKDIRIDQKEDGSF-----ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL---- 112 + +++ + D + + L + LPLL + V ++ Sbjct: 64 LDLQLDGLKMIKANDSIPTQKDTVADVHRLVVSIGLLPLLEKRVEVNELTFTGLKANTTN 123 Query: 113 ---------NFYLS------------------SKGVSNW---------FQRKSTMDMIHN 136 N + W + + Sbjct: 124 FIGDLRIKGNLQRLHIVSHAVNLVGDSVRVNKADIEGGWIDVALGDTVPEDPHKQKPLWR 183 Query: 137 VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196 + ++K+++ K+ + + ++ L + + + + G Sbjct: 184 INIDKMNLAKTDFKLHMPGDTMIVRAQFGDAKVRGTELLLHDNIYKVAD---IDWHGGAF 240 Query: 197 FDNKRSAFKITANFPAKNKAIS-LKIQLFPLAYPI-IIDLF---GNLFWNEKQPIYSGV- 250 ++ + A F A + A++ + + + + I L GN + Sbjct: 241 NYDQPFVKRAAAGFDAAHIAMTDVNLGIDSFFFAAPKISLRVRAGNFKERSGLVVRDLRC 300 Query: 251 -FSVAGDFSKLLNLELSAKKSRLSGNFKIS 279 F + +L +L L S SG ++ Sbjct: 301 PFRMDATSIQLPSLYLLMPNSEFSGRLRMD 330 >gi|126333631|ref|XP_001365765.1| PREDICTED: similar to AHNAK nucleoprotein [Monodelphis domestica] Length = 2138 Score = 36.4 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 30/247 (12%), Positives = 65/247 (26%), Gaps = 30/247 (12%) Query: 60 PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL-------LSGEIRVFDMYIDQPHL 112 P D+ + + + G + +SG+I+ + +D P + Sbjct: 1596 PNLKFEGPDVTLKGPQGDLPSVNLSGPDLDLNLKGPKLKGDLDISGDIKCPKVSVDAPDV 1655 Query: 113 NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172 + + + L + + + + +++ + Sbjct: 1656 SLE-----------APGGAIKLPQMKLPQFGISSQGSNLDVNVAGPELKGPGVDVHLRGV 1704 Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS------LKIQLFPL 226 L +S I + G PA A+ L+ L P Sbjct: 1705 DLKGP-QMSGPQISSDMDFNLEGPKIKGGFGASGDMKGPAVGVALPGISVQGLEGNLQPP 1763 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 + N K P G S +G ++S + S + G + + Sbjct: 1764 DVKLPRCEAELPAVNVKLPT--GKLSGSGIGLHGAAPDVSVQGPAFSAS---DLGGISLK 1818 Query: 287 RYKLQSI 293 K+Q Sbjct: 1819 GPKIQGG 1825 >gi|261345188|ref|ZP_05972832.1| conserved hypothetical protein [Providencia rustigianii DSM 4541] gi|282566880|gb|EFB72415.1| conserved hypothetical protein [Providencia rustigianii DSM 4541] Length = 1259 Score = 36.4 bits (82), Expect = 7.0, Method: Composition-based stats. Identities = 40/379 (10%), Positives = 109/379 (28%), Gaps = 53/379 (13%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + + ++++ + G A+ ++P Sbjct: 4 MKWLKWIAITILLLLVLVVGALYWV-------------LGTKSGLHFALNTAT--RLVPE 48 Query: 62 PSVF-----FKDIRIDQKEDGSFESKIE--GLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114 ++ +D+ + + ++ + + L S E+ + D+ D +N Sbjct: 49 LTIESIDGGIEDLTLSGVKYQMPGIDVDAKKIHLAWRLKCLTSREVCIDDLSTDTVTVNV 108 Query: 115 YLS---SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII---------------DQES 156 S + + + ++ + L ++ + + + Q++ Sbjct: 109 DTSQFPPSEEAPPSEPLTELNAPLTIRLNQLALVNTHVNVDGTVIDLDKFATGITWQQKA 168 Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216 + +NL IS + + + + A+ Sbjct: 169 INIIPTDIINLAISLPVSEEPTVETPVQPVVPQAPIEEQKPLGEELKALFSKPLLAELPE 228 Query: 217 ISLKIQLFPLA-YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275 I L + L + L G S K LN++ K +SG+ Sbjct: 229 IILPVDLNVEGIHASNFQLKGATDLTINSLNLKLENSGQSVLLKQLNVDAPQGKVAISGS 288 Query: 276 FKISD---------GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326 +++ G R+ Q + + + K++ + +N + Sbjct: 289 ISLAEKWPVALSVIGESRLEDLSGQKLDLSLKGGLLEELKLALNLNGPVNAKLDAQ---T 345 Query: 327 DLNETDFFEEEEKKNKNDD 345 DL++ DF E +++ Sbjct: 346 DLSQADFPIELTLESQKLT 364 >gi|328907602|gb|EGG27366.1| hypothetical protein PA08_0632 [Propionibacterium sp. P08] Length = 248 Score = 36.4 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 84/260 (32%), Gaps = 35/260 (13%) Query: 12 LFSVVLVGAFTVPLFIDWTDFRED----FERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67 L ++V++ V I FR +G + G + IH LPF V Sbjct: 17 LVALVVIALLAVVAAIVDQTFRARAEKDIAATIAKSIGANASTVG-VTIHNLPFLGVLVT 75 Query: 68 DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127 D + + ++ ++ F + + + + +S+ G +W + Sbjct: 76 D-ELQGIDTTISKATVDRDDTTVTFRDVDIHANGIRHAREESQAVAETMSATGRIDWSEL 134 Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187 + GG++ D + + ++ + + + ++I + + + Sbjct: 135 S--------------RLAGGKVTYNDD-TGETGRVAIVTVLGARVDVSITAVPGVKTTSR 179 Query: 188 SVIAEG-TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246 V + + D+ + LK L + + GNL + + Sbjct: 180 RVTLSSPSASLDDIPIP------------DVLLKPILDGITSRFTLPDLGNLHYESLKAT 227 Query: 247 YSG-VFSVAGDFSKLLNLEL 265 G FS+ G KL +L Sbjct: 228 SQGLDFSLVGTGVKLSDLTG 247 >gi|212703417|ref|ZP_03311545.1| hypothetical protein DESPIG_01461 [Desulfovibrio piger ATCC 29098] gi|212673162|gb|EEB33645.1| hypothetical protein DESPIG_01461 [Desulfovibrio piger ATCC 29098] Length = 1143 Score = 36.4 bits (82), Expect = 7.3, Method: Composition-based stats. Identities = 25/203 (12%), Positives = 59/203 (29%), Gaps = 11/203 (5%) Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLKIQLFPL 226 + + PL D + + + G F + K+ A A+ L+++ Sbjct: 719 DLPGSLRLHLPPLEKDLLPQGMDLDADGVFSCAGPAGLKLK---KATLSALGLQLKGDLE 775 Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286 A L + + +L S RL + ++R+ Sbjct: 776 AANGRNGLTWGGTVDLAVRDLKHSLRQIRGSAP-ASLPASLNSLRLKSTASGTPDSLRLK 834 Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346 + D + V+ L+ + AE D + F ++ + Sbjct: 835 DLRCSLGW----QQVDGEAAVTWSGTPQLDLRLHAAEFDLDRLLAEMFPDQARSKGRSKA 890 Query: 347 KKD--DIQYSVNKKEEKDNSHDK 367 D+++ + + + D+ Sbjct: 891 PGAPWDLRFMKSFDAQGSLNVDR 913 >gi|27544714|dbj|BAC55052.1| DnaA [Mycobacterium nonchromogenicum] Length = 173 Score = 36.4 bits (82), Expect = 7.3, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 28/108 (25%), Gaps = 10/108 (9%) Query: 12 LFSVVLVGAFTVPLFIDWTDF----REDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67 L V VP + R + +G I + + I P P+ Sbjct: 1 LAIVEGFALLAVPSSFVQNEIERHLRTQITDALSRRLGHPI----ELGVRISPQPAEESP 56 Query: 68 DIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113 E GS + E + ++ + D LN Sbjct: 57 STATNDSGVEVGSDDEDDETTDVEYDWPNYFTERPSEDSPTADGASLN 104 >gi|313159656|gb|EFR59014.1| hypothetical protein HMPREF9720_0995 [Alistipes sp. HGB5] Length = 1527 Score = 36.4 bits (82), Expect = 7.3, Method: Composition-based stats. Identities = 20/152 (13%), Positives = 46/152 (30%), Gaps = 12/152 (7%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDW--------TDFREDFERQATLIVGKKIAVKGG 53 +R+ + LG + S ++ +PL + + R A+ + +++ Sbjct: 1 MRKGIKILGKVLSAAVLLLIILPLALSLLLDIPAVQNYVVQKAVRMASKKLETTVSID-- 58 Query: 54 IKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113 ++ I F V K + + + L L + G + + I L Sbjct: 59 -RVDIGLFSRVKIKGFYV-EDYQRDTLLYVGRLDAFVTGLGIFGGGLSLSRGEIADAKLY 116 Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVK 145 + G N Q + + + Sbjct: 117 LRETPGGEMNIKQIVNRISNPDKPKKGNFRLS 148 >gi|291514987|emb|CBK64197.1| Uncharacterized protein conserved in bacteria [Alistipes shahii WAL 8301] Length = 1561 Score = 36.4 bits (82), Expect = 7.3, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 56/159 (35%), Gaps = 9/159 (5%) Query: 1 MLRRVLIGLGFLFSVVLVGAFTVPLFIDW----TDFREDFERQATLIVGKKIAVKGGIKI 56 ML+++L V+L+ VP + R A+ +G +++V+ +I Sbjct: 1 MLKKILKHTLRTLLVILLVLLLVPALLYVPAVQDLARRRAVAYASRTLGMEVSVE---RI 57 Query: 57 HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116 + + + + + D + LS+ A PL+ E+ + +++ ++ Sbjct: 58 RLAFPLRLTVDNTLLADRTD--TLLRCGRLSLDAALWPLIRKEVVIRSFALERVAAHYKD 115 Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE 155 + G+ L R+ + D + Sbjct: 116 TLAGMDLRLAAGELSLEAVRADLSANTAGISRLVLADAD 154 >gi|309972743|gb|ADO95944.1| Hypothetical protein R2846_0505 [Haemophilus influenzae R2846] Length = 391 Score = 36.4 bits (82), Expect = 7.5, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 44/112 (39%), Gaps = 17/112 (15%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 +++ + +G +F + L+I + Q IAV+ I + + Sbjct: 1 MKKFALIIGIVFLAIF-----SFLYIQLYRVQSAINEQLAQQ---NIAVQ-SINLSLF-S 50 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113 P++ ++++ + + + + + FLPLL G + + I Q L Sbjct: 51 PALSLENLK-------TTQFSAQKIEAKFSFLPLLYGNAALHSLNIQQLKLT 95 >gi|170761838|ref|YP_001785457.1| germination protein YpeB [Clostridium botulinum A3 str. Loch Maree] gi|169408827|gb|ACA57238.1| germination protein YpeB [Clostridium botulinum A3 str. Loch Maree] Length = 456 Score = 36.4 bits (82), Expect = 7.6, Method: Composition-based stats. Identities = 32/281 (11%), Positives = 82/281 (29%), Gaps = 17/281 (6%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 RR+L L VV F + + ++ D+R + + + + + I I++++ Sbjct: 6 RRILYTLIVTLIVVFSSTFAILMTLERNDYRNYLQGEYSKSLHELITSVQNIRVNL---- 61 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 I D E + + + + I + Sbjct: 62 ----SKASIIGSRD-QEIVTFEEIFKYSSMANDKLHSLPIDQNTIANTSKFLSQVGDFSN 116 Query: 123 NWFQRKSTMDMIHNVILEKI-HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + + + + E I +K +++ +Q ++ V +++ ++ + L Sbjct: 117 SLGKSIVKNNDLSKKDYENIERLKKESLQLENQLNNVVTDINEGRVKWGDIRKKVGGVL- 175 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 + + +G N K+ + +LKI + I Sbjct: 176 --AKENPNSVKGQFNNMQKQVMQYPALIYDGPFSDNTLKITPKVNSEK-NISQN---QAQ 229 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282 + G + ++ + R + K D Sbjct: 230 KMAENIIGKDKIKSIKLDTNEVKTNIGTYRFIADIKGRDNK 270 >gi|315656624|ref|ZP_07909511.1| serine/threonine kinase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492579|gb|EFU82183.1| serine/threonine kinase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 663 Score = 36.4 bits (82), Expect = 7.9, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 77/269 (28%), Gaps = 37/269 (13%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFRED---FERQATLI----VGKKIAVKGGIK 55 R LIG V+L T +R +Q + + + + Sbjct: 373 RWFLIGGIIGAIVLLAAILTWFFMWGPGSYRPMVDVVNQQWSDASKSLTAADVTFE---R 429 Query: 56 IHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAE------FLPLLSGEIRVFDMYIDQ 109 + + +V ++ G + + + +P L+G+ + + + + Sbjct: 430 VDVFDD-NVPAGNVARTDPAPGKPLGRFQTAKIFVSKGVEMLTMPDLTGKTQEEALELVK 488 Query: 110 ------PHLNFYLS---SKGVSNWFQRKSTMDMIHNVILEKIHVKGGR--IKIID----Q 154 P ++ +G + Q + + + + K+ V GR + ++D Sbjct: 489 KARFNAPQVSEEFHDTVPEGQVS-AQDPAPNASVPHNTIVKVMVSKGRQPVTMLDLVGKP 547 Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG-NFDNKRSAFKIT---ANF 210 S+ L+ + LQ + I SV T D A Sbjct: 548 GSEAQSELTKVGLQPQVKEEFSDGVPKGKVISQSVAPNTTLHRLDQVTLVVSKGPEMAAV 607 Query: 211 PAKNKAISLKIQLFPLAYPIIIDLFGNLF 239 P + + + +++ Sbjct: 608 PNVFGKSEGEARSALESAGFTVNVKRTFG 636 >gi|304396930|ref|ZP_07378810.1| protein of unknown function DUF490 [Pantoea sp. aB] gi|304355726|gb|EFM20093.1| protein of unknown function DUF490 [Pantoea sp. aB] Length = 1255 Score = 36.4 bits (82), Expect = 7.9, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 94/305 (30%), Gaps = 29/305 (9%) Query: 19 GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS 78 F PL DFR + I+G+++ V G + + + K Sbjct: 213 AMFAQPLLPALPDFRLPLDIDVQQILGEQLRVTGDTD--------IAVSRLLLKAKTADR 264 Query: 79 FESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSK---GVSNWFQRKSTMDMI 134 ++ L + + L SG+ + D + LN +++ G + M Sbjct: 265 QM-QLTTLEVDSNLGNLKGSGQATLADNWPVDFSLNGTVNTDPIKGEKLALKLNGAMRDA 323 Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194 + L ++ D + L+LQ+++ L I ++ + Sbjct: 324 LKLGLNLSGPVNAQL---DATTQLAVAGLPLSLQLTSPQLRWPLTGPIQYQADNLDYQFK 380 Query: 195 GNFDNKRSAFKI-----TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW-----NEKQ 244 G + + + + + ++ F L + L GN+ K Sbjct: 381 GKATDYVMSLQTAVKGESVPPANVSLTGKGNVEQFSLDRLRVAALQGNIDLTALVDWSKA 440 Query: 245 PIYSGVFSVAGDFSKLLNLELSA---KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301 + ++AG + + A K G+ + + + +L+ + ++ Sbjct: 441 ISWRSELTLAGINTAKQYPDWPARLDGKITTRGSLYGGTWQLSVPQLQLKGNVKKNAVTA 500 Query: 302 DNKTK 306 D Sbjct: 501 DGSLT 505 >gi|296392799|ref|YP_003657683.1| ABC transporter [Segniliparus rotundus DSM 44985] gi|296179946|gb|ADG96852.1| ABC transporter related protein [Segniliparus rotundus DSM 44985] Length = 605 Score = 36.4 bits (82), Expect = 7.9, Method: Composition-based stats. Identities = 29/269 (10%), Positives = 73/269 (27%), Gaps = 27/269 (10%) Query: 17 LVGAFTVPLFIDWT---------DFREDFERQATLI--VGKKIAVKGGIKIHILPFP--- 62 LV A ++ ++++W D + + ++V I+ LP P Sbjct: 286 LVAAISLVMYLNWPLTSIALLLGDLFSTVNAAVRHWELMDRPVSVTDPIRPRALPQPVRG 345 Query: 63 SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122 + F+ + + + L +R + L G + + G Sbjct: 346 ELAFEHVGFTYPDAKAPVLTDVSLQLRPGEILALVGPTGSGKSTLANLVPRLLDVTSGRI 405 Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL--NLQISARFLNIISPL 180 + V + ++ + R +I + V F + + N+ + + Sbjct: 406 ----------TLDGVDIRELRLADLRAQIAVAFEEPVLFSASVRENVALGQPDATDGAVA 455 Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240 I + + + + + L + L P ++ L L Sbjct: 456 DALEIASAAEFVAKLPW-GASTRVGEQGLSLSGGQRQRLALARSVLGQPKVLVLDDPLSA 514 Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKK 269 + + + +A Sbjct: 515 LDVDTEAQVQAKLRRAVQDSEGAQGAAAP 543 >gi|27544728|dbj|BAC55059.1| DnaA [Mycobacterium terrae] Length = 174 Score = 36.4 bits (82), Expect = 7.9, Method: Composition-based stats. Identities = 14/112 (12%), Positives = 25/112 (22%), Gaps = 17/112 (15%) Query: 12 LFSVVLVGAFTVPLFIDWTDF----REDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67 L V VP + R + +G I + + I P P Sbjct: 1 LAIVEGFALLAVPSSFVQNEIERHLRTQITAALSRRLGHDI----ELGVRIAPAP---AD 53 Query: 68 DIRIDQKEDGSFESKIEGL------SMRAEFLPLLSGEIRVFDMYIDQPHLN 113 D + + + ++ + D LN Sbjct: 54 DGSASSDNPAPARAGEDEDDEDDTPDVEYDWPNYFTERPSDDSATADGASLN 105 >gi|169615719|ref|XP_001801275.1| hypothetical protein SNOG_11023 [Phaeosphaeria nodorum SN15] gi|160703029|gb|EAT81522.2| hypothetical protein SNOG_11023 [Phaeosphaeria nodorum SN15] Length = 628 Score = 36.4 bits (82), Expect = 8.1, Method: Composition-based stats. Identities = 24/238 (10%), Positives = 56/238 (23%), Gaps = 18/238 (7%) Query: 26 FIDWTDFREDFERQATLIVGKKIAVK-GGIKIHILPFPSVFFKDIRIDQ----KEDGSFE 80 F D+ R++ R+ G+ + I + I + + + Sbjct: 52 FFDFNKIRDEIVRETDAKTGRNAGISPAPINLRIYSPNVLTLTLVDLPGLTKVPVGDQPR 111 Query: 81 SKIEGLSMRAEFLPLLSGEIRVFDMYI--------DQPHLNFYLSSKGVSNWFQRKSTMD 132 IE + + + D L + +G Sbjct: 112 -DIERQIREMVLKQISKSNAIILAVTAANTDLANSDGLQLAREVDPEGQRTIGVLTKVDL 170 Query: 133 MIHNVILEKI---HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189 M + I + R+ + + + + A + + + Sbjct: 171 MDQGTDVVDILAGRIIPLRLGYVPVVNRGQRDIENKKAISYALEHEKQFFENHKAYRNKA 230 Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247 GT + ++ + + I +I Y + GN I Sbjct: 231 AYCGT-PYLARKLNLILMMHIKQTLPDIKARIASSLQKYQAELASLGNSMLGNSSNIV 287 >gi|220917820|ref|YP_002493124.1| glycosyl transferase family 51 [Anaeromyxobacter dehalogenans 2CP-1] gi|219955674|gb|ACL66058.1| glycosyl transferase family 51 [Anaeromyxobacter dehalogenans 2CP-1] Length = 656 Score = 36.4 bits (82), Expect = 8.2, Method: Composition-based stats. Identities = 36/372 (9%), Positives = 82/372 (22%), Gaps = 74/372 (19%) Query: 3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62 R G+ L + V + R E IL Sbjct: 20 RAAGWGVLALACLYGVALVALS--------RPAAEAALRR--------------RILAGL 57 Query: 63 SVFFKDIRI--------------------DQKEDGSFESKIEGLSMRAEFLPLLSGEIRV 102 D+ + + ++E + R L LL+G + Sbjct: 58 RASVGDVTLGPDVHVSPLLRVSFGPLAIAGARPGAPPVLRVERIEARPRLLALLAGRAEL 117 Query: 103 FDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKI-------------------- 142 + + + G S + Sbjct: 118 ASVRMTG--VRVEAGRSGRSLLELGERLRGPPARRGALPARAPAASAPEPAPEADEAAPW 175 Query: 143 -HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI---KGSVIAEGTGNFD 198 V+ + I + L ++ +S + L D G+ + Sbjct: 176 PSVQARALVIAFVLGGKTVELGPIDAHLSRARGDGEERLRADLRLPGGGTATVDARREAS 235 Query: 199 NKRSAFKIT----ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254 R+ + A P A ++ ++ L+ +D +L + + + + Sbjct: 236 GWRATLGVRHLGPAAIPEALGAGAVSLREGTLSLDATLDAAPDLSRLGGRAVLAVE-GAS 294 Query: 255 GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314 ++ L + G+ R+S ++ + + Sbjct: 295 VAGERIGAEPLGPISATAEGDVAWEGAERRVS-LSGGRVVLFGAIPAAVSGQARLGPGLP 353 Query: 315 LNFSENGAESMH 326 S Sbjct: 354 FELSARLDRLDF 365 >gi|109947912|ref|YP_665140.1| penicillin-binding protein [Helicobacter acinonychis str. Sheeba] gi|109715133|emb|CAK00141.1| penicillin-binding protein [Helicobacter acinonychis str. Sheeba] Length = 659 Score = 36.4 bits (82), Expect = 8.3, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 9/68 (13%) Query: 1 MLRRVLIGLGFLFSVV--LVGAFTVPLFIDWT-------DFREDFERQATLIVGKKIAVK 51 ML+++ GLG L +V L+ ++++ D+R Q G+ IA Sbjct: 1 MLKKIFYGLGVLVLIVMGLLAILIAQVWVNTDKDIAKIKDYRPSVASQILDRKGRLIANI 60 Query: 52 GGIKIHIL 59 + Sbjct: 61 YDKEFRFY 68 >gi|229490187|ref|ZP_04384034.1| putative secreted protein [Rhodococcus erythropolis SK121] gi|229322935|gb|EEN88709.1| putative secreted protein [Rhodococcus erythropolis SK121] Length = 256 Score = 36.4 bits (82), Expect = 8.5, Method: Composition-based stats. Identities = 13/104 (12%), Positives = 33/104 (31%), Gaps = 13/104 (12%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 RVLI L + +V++ L++ + Q +G ++ + + P Sbjct: 13 RVLIILLVVIAVLVAALVGGELYVR-NQVKTCMADQFQSELGSQV----DVGLSWKP--- 64 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 + + + I+ + +V D+ + Sbjct: 65 -----VLLQAVDKKVPYISIDSDDSSFGPATGMQVHAKVNDINL 103 >gi|73666752|ref|YP_302768.1| hypothetical protein Ecaj_0119 [Ehrlichia canis str. Jake] gi|72393893|gb|AAZ68170.1| hypothetical protein Ecaj_0119 [Ehrlichia canis str. Jake] Length = 881 Score = 36.4 bits (82), Expect = 8.5, Method: Composition-based stats. Identities = 50/383 (13%), Positives = 117/383 (30%), Gaps = 32/383 (8%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKKIAVKGGIKIHI-LPF 61 R+LI G + +L+ P FI+W + +Q I + VKG + L Sbjct: 2 RILIYSGGIILTLLLFLIISPFFINWNSYYASHILKQIEDISDY-VTVKGVGSVTGKLIL 60 Query: 62 PSVFFKDIRIDQKEDGSFE---SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118 P + ++ I+ S + L ++ L LL +V + +D + Sbjct: 61 PKIIVNNLYIEGHGKLSTHKSTILVNQLELKISLLSLLLFSPKVNTITVDGLSIPL---- 116 Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII-DQESDQVYFLSDLNLQISARFLNII 177 + + + ++ + D S +S I + Sbjct: 117 ----GNLVSLFSSFQGKSFNINTFNIVNSVVNTDYDGTSFNSKPISIKEGSIKTINGAKV 172 Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237 + K G + + + + +S ++ + Sbjct: 173 INGLLSIGKNDYNLVGDVSVNEDHNKINANVYSQSTKVTLSGVASGNKFDGVVLANGTDF 232 Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297 + + + + + S ++ LS N K+S + ++ K+ + + Sbjct: 233 SQFINDISETN--------KTSIFSFINSNEEFSLSANLKLSGQSFELNDLKVSTDSIDG 284 Query: 298 ------STDEDNKTKVSQDEENLLNFSENGAESMHDLNET---DFFEEEEKKNKNDDLKK 348 S+ V + N+ + S + S E+ D+F +N + +K Sbjct: 285 IGKIVCSSYASCDASVDFSKINIDHLSGSNNGSDAYSKESRTLDYFNTLISENLDYKVKI 344 Query: 349 DDIQYSVNKKEEKDNSHDKENQE 371 + + + + + D E + Sbjct: 345 SAKEIKYHDEVSSNLALDFEVLK 367 >gi|321313849|ref|YP_004206136.1| hypothetical protein BSn5_12475 [Bacillus subtilis BSn5] gi|320020123|gb|ADV95109.1| hypothetical protein BSn5_12475 [Bacillus subtilis BSn5] Length = 483 Score = 36.0 bits (81), Expect = 8.9, Method: Composition-based stats. Identities = 30/265 (11%), Positives = 78/265 (29%), Gaps = 22/265 (8%) Query: 111 HLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170 + ++S F+ + T + V + I + + L L Sbjct: 225 KITVPVTSPSKKVPFKIERTGSLPDGVSIANIESSPSEVTVY----GSQDVLDSLEFIDG 280 Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-------- 222 D + +G + I + A K ++ I+ Sbjct: 281 VSLDLSKINKDSDIEADIPLPDGVKKISPSKVTLHIEVDSEADQKFENVPIKTVGLSSSQ 340 Query: 223 ----LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---RLSGN 275 L P + I + G+ K V + + + + ++ + Sbjct: 341 NIEFLDPESQAIDVTAKGSPTNINKLKKSDIELYVNVSDLEDGEHSVKLEVNGPQNVTWS 400 Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335 + ++++ K + ++S++ + + N ++ D N D + Sbjct: 401 LGRKNAKIKLTSKKSNTSTNDNSSNTSGNQDHTDKQTNDQKNNQQEDTKNTDKNSNDQNQ 460 Query: 336 EEEKKNKNDDLKKDDIQYSVNKKEE 360 +E NK+ + +D+ + + N Sbjct: 461 DE---NKDQNQDQDEDESTANSSSS 482 >gi|21492832|ref|NP_659907.1| sugar ABC transporter, permease protein [Rhizobium etli CFN 42] gi|190894114|ref|YP_001984408.1| sugar ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|21467257|gb|AAM54920.1| sugar ABC transporter, permease protein [Rhizobium etli CFN 42] gi|190699775|gb|ACE93858.1| sugar ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|327193505|gb|EGE60399.1| sugar ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 313 Score = 36.0 bits (81), Expect = 9.2, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 4/75 (5%) Query: 5 VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFER---QATLIVGKKIAV-KGGIKIHILP 60 + + +G L +V+ +P F+D + + +G+ + GG+ + + Sbjct: 17 IGLSIGTLLVMVVASVILLPDFMDPENLSNLLAQSTVLVISALGQTFVILTGGLDVSVGS 76 Query: 61 FPSVFFKDIRIDQKE 75 S+ + +D E Sbjct: 77 VISLTTTIMTLDLPE 91 >gi|223040100|ref|ZP_03610380.1| tryptophanyl-tRNA synthetase [Campylobacter rectus RM3267] gi|222878577|gb|EEF13678.1| tryptophanyl-tRNA synthetase [Campylobacter rectus RM3267] Length = 861 Score = 36.0 bits (81), Expect = 9.5, Method: Composition-based stats. Identities = 40/351 (11%), Positives = 92/351 (26%), Gaps = 21/351 (5%) Query: 2 LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61 ++ + LG +F++++ R + G + K I P Sbjct: 1 MKILGALLGLVFALIIAAYVAAFTDFGNGLVRPYAQNLIKEKSGFDVKFD---KFQIRPT 57 Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121 I I + + + G L ++ V D+ LN + GV Sbjct: 58 ------SIDIVANINDEIAANVNGGLSIFSQSLDLKYDVAVSDLKSLGVKLNEAMKISGV 111 Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181 + T + + G + D L+ + + Sbjct: 112 AKGEFSDFTASGVGQM-------LGSNVSFDANLKDYKPLSLKLDAKNLQVEKALALAGQ 164 Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241 G + A + + +L + F + P G + Sbjct: 165 PIYAHGKISAVANIVESGGKPNGTANIDILDVKTDNALIAKDFNITLPPNFAANGKIAAE 224 Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL-PNSSTD 300 K I S +V + + + + + + + + +S+++ + + Sbjct: 225 IKDGIVSAKSAVITPLATIGSDKTIYDLNSNTLSSDVKLIVDDLSKFEPVVGQKLSGAFK 284 Query: 301 EDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351 + + E + G D + K LK D++ Sbjct: 285 ANGNVIATAGELKNFDVKIEGFGGNVD----AVLNGGKLIAKISSLKLDEL 331 >gi|226305083|ref|YP_002765041.1| hypothetical protein RER_15940 [Rhodococcus erythropolis PR4] gi|226184198|dbj|BAH32302.1| hypothetical protein RER_15940 [Rhodococcus erythropolis PR4] Length = 272 Score = 36.0 bits (81), Expect = 9.8, Method: Composition-based stats. Identities = 12/104 (11%), Positives = 33/104 (31%), Gaps = 13/104 (12%) Query: 4 RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63 RVL+ L + +V++ L++ + Q +G ++ + + P Sbjct: 29 RVLVILLVVIAVLVAALVGGELYVR-NQVKTCMADQFQSELGSQV----DVGLSWKP--- 80 Query: 64 VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107 + + + I+ + +V D+ + Sbjct: 81 -----VLLQAVDKKVPYISIDSDDSSFGPATGMQVHAKVNDINL 119 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.307 0.116 0.238 Lambda K H 0.267 0.0358 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 959,383,247 Number of Sequences: 14124377 Number of extensions: 21668207 Number of successful extensions: 202240 Number of sequences better than 10.0: 2869 Number of HSP's better than 10.0 without gapping: 1386 Number of HSP's successfully gapped in prelim test: 1483 Number of HSP's that attempted gapping in prelim test: 198656 Number of HSP's gapped (non-prelim): 3423 length of query: 380 length of database: 4,842,793,630 effective HSP length: 141 effective length of query: 239 effective length of database: 2,851,256,473 effective search space: 681450297047 effective search space used: 681450297047 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 81 (36.0 bits)