BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780954|ref|YP_003065367.1| hypothetical protein
CLIBASIA_04265 [Candidatus Liberibacter asiaticus str. psy62]
         (380 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|254780954|ref|YP_003065367.1| hypothetical protein CLIBASIA_04265 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040631|gb|ACT57427.1| hypothetical protein CLIBASIA_04265 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 380

 Score =  297 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 380/380 (100%), Positives = 380/380 (100%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP
Sbjct: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG
Sbjct: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
           VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL
Sbjct: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
           SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW
Sbjct: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300
           NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD
Sbjct: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300

Query: 301 EDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEE 360
           EDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEE
Sbjct: 301 EDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEE 360

Query: 361 KDNSHDKENQENFSGDKMIL 380
           KDNSHDKENQENFSGDKMIL
Sbjct: 361 KDNSHDKENQENFSGDKMIL 380


>gi|13471495|ref|NP_103061.1| hypothetical protein mll1482 [Mesorhizobium loti MAFF303099]
 gi|14022237|dbj|BAB48847.1| mll1482 [Mesorhizobium loti MAFF303099]
          Length = 1341

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 94/339 (27%), Positives = 161/339 (47%), Gaps = 23/339 (6%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           ML R+ +  G LF +VL  A  VP F+DWT +R +FER+A+ I+G+K+ V+G     +LP
Sbjct: 1   MLARLFVIFGGLFVLVLCAALVVPYFVDWTGYRAEFEREASAILGRKVTVQGDATARLLP 60

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           FPSV F ++ +    +G     +E  SM AE  P L GE+ +FDM +  P     +++ G
Sbjct: 61  FPSVTFSNVAVAGGPNGQPAMTVETFSMDAELAPFLRGEVLIFDMRLVHPKATIDIANDG 120

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +W  R S+   ++ + +EK+ V  G+I++      + +  S++N           S +
Sbjct: 121 TVDWAMRPSSPFDLNQISIEKLTVTEGQIELRHAAGGRSHIFSEIN-----------STI 169

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
           S  S+ G    +GT   D  R+    +      N  + L+++  P AYP++I+  GN   
Sbjct: 170 SAKSLAGPWRLDGTLRLDGLRTTVAASTGKAEGNGQMRLRLKADPDAYPLVIETDGNAGI 229

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLEL--------SAKKS----RLSGNFKISDGNVRISRY 288
            +   +YSG F ++G       L          SA K     RL+G F +    + +  +
Sbjct: 230 VKGAAVYSGQFKISGADKNSAQLRGTDGETVKVSAGKPDPGFRLNGKFSLDHQKLGVDEF 289

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
           + ++   ++    D K  V   ++       NGA+   D
Sbjct: 290 RFETGPLDNPYTADGKASVDLGQKPNFAIEANGAQVQFD 328


>gi|260462142|ref|ZP_05810386.1| conserved hypothetical protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259032002|gb|EEW33269.1| conserved hypothetical protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 1326

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 91/339 (26%), Positives = 158/339 (46%), Gaps = 23/339 (6%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           ML R+ +  G LF +VL  A  VP FIDWT +R DFER+A+ I+G+K+ V+G     +LP
Sbjct: 1   MLARLFVIFGGLFVLVLCAALVVPYFIDWTGYRTDFEREASAILGRKVTVQGDATARLLP 60

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           FPSV F ++ +    +G     +E  SM AE  P L GE+ +FDM + +P     ++  G
Sbjct: 61  FPSVTFSNVAVAGGPNGEPAMTVETFSMDAELAPFLRGEVLIFDMRLVRPKATIDIARDG 120

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +W  R S+      + +EK+ V  G+I++      + +  S++N           S +
Sbjct: 121 TVDWAMRPSSPFNPSQISIEKLTVTEGQIELRHAAGGRSHIFSEIN-----------STI 169

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
           S  S+ G    +GT   D  R+    +      +  + ++++  P AYP++I+  GN   
Sbjct: 170 SAKSLAGPWRLDGTLRLDGLRTTVAASTGKAEPSGQMRIRLKADPDAYPLVIETDGNAGI 229

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS------------RLSGNFKISDGNVRISRY 288
                +YSG F ++G       L  +  ++            RL+G F +    + +  +
Sbjct: 230 VNGAAVYSGQFKISGADKNSAELRGTDGETVKVSTGKPDPGFRLNGKFSLDHQKLGVDEF 289

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
           + ++   ++    D K  V   ++       NGA+   D
Sbjct: 290 RFETGPLDNPYTADGKASVDLGQKPSFAIEANGAQVQFD 328


>gi|319782902|ref|YP_004142378.1| hypothetical protein Mesci_3204 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317168790|gb|ADV12328.1| hypothetical protein Mesci_3204 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 1319

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 95/339 (28%), Positives = 158/339 (46%), Gaps = 23/339 (6%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           ML R+ +  G LF +VL  A  VP FIDWT +R DFER+A+ I+G+K+ V+G     +LP
Sbjct: 1   MLARLFVIFGGLFVLVLCAALVVPYFIDWTGYRADFEREASAILGRKVTVQGDATARLLP 60

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           FPSV F ++ +    +G     +E  SM AE  P L GE+ +FDM + +P     +++ G
Sbjct: 61  FPSVTFSNVAVAGGTNGQPAMTVETFSMDAELAPFLRGEVLIFDMRLVRPKATIDIANDG 120

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +W  R S+      + +EK+ V  G+I++      + +  S++N           S +
Sbjct: 121 TVDWAIRPSSPFDPSQISIEKLTVTEGQIEVRHAAGGRSHLFSEIN-----------STV 169

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
           S  S+ G    +GT   D  R+A   +      +  +  +++  P AYP++I+  GN   
Sbjct: 170 SAKSLAGPWRMDGTLRLDGLRTAVTASTGKAEGSGQMRFRLKADPDAYPLVIETDGNAGI 229

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLEL--------SAKKS----RLSGNFKISDGNVRISRY 288
                +YSG F ++G       L          SA K     RL+G F +    + +  +
Sbjct: 230 VNGAAVYSGQFKISGADKNSAELRGTDGETVKVSAGKPDPGFRLNGKFSLDHQKLGVDEF 289

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
           + ++   ++    D K  V    +       NGA+   D
Sbjct: 290 RFETGPLDNPYTADGKASVDLGLKPSFAIEANGAQVQFD 328


>gi|110634334|ref|YP_674542.1| AsmA [Mesorhizobium sp. BNC1]
 gi|110285318|gb|ABG63377.1| AsmA [Chelativorans sp. BNC1]
          Length = 1273

 Score =  234 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 88/330 (26%), Positives = 151/330 (45%), Gaps = 16/330 (4%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67
            +G L  +VL  A   P FIDWT +R  FER+A+ I+G+++ V+G  +  +LPFPSV F 
Sbjct: 2   IIGGLVVLVLTAALVAPYFIDWTSYRAAFEREASRILGREVRVEGTARARLLPFPSVTFT 61

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127
           D+ +   E G     ++  SM AE  P L GE+ +FDM + +P  +  ++S G  +W  R
Sbjct: 62  DVVVAGAEPGDPAMTVDEFSMDAELAPFLRGELLIFDMRLVRPSASIEIASTGQVDWAVR 121

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187
            S+      + LE + V  G I ++   S +   LS++N           S +S  S+ G
Sbjct: 122 PSSPFDPSQIRLEGVTVSAGTITVLQHASGRTVTLSNIN-----------SEISARSLAG 170

Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
                GT   +        +    A + A+ ++I   P  YP++I+  G    +++Q  Y
Sbjct: 171 PWRVTGTLQVNGLPVTLTASTGT-ASDGAMRVRISAQPRDYPVLIETDGEARLDQEQGRY 229

Query: 248 SGVFSVAGDFSKLLNLELSAKK----SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
           SG F            E SA      +R++G F +    + I  ++ Q+   ++    D 
Sbjct: 230 SGTFRFVNANPSEEAQEASAAAVNPGNRVAGRFSLDHQRLAIDEFRFQTGPEDAPYTADG 289

Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDF 333
              V        + + +GA+   D ++ + 
Sbjct: 290 TAAVDFGANPSFSVTADGAQIRLDESQAEA 319


>gi|153009099|ref|YP_001370314.1| AsmA family protein [Ochrobactrum anthropi ATCC 49188]
 gi|151560987|gb|ABS14485.1| AsmA family protein [Ochrobactrum anthropi ATCC 49188]
          Length = 1278

 Score =  232 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 84/352 (23%), Positives = 161/352 (45%), Gaps = 20/352 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G LF ++L  A  VP F+DW+ +R DFER+A+ ++G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLFVLLLTAALVVPPFVDWSGYRADFEREASRVLGRPVKVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +D+P +   L   G 
Sbjct: 61  PSVAFSDVRV-GPDAAHPVMTVDTFSMDAELMPFLRGQLLIFDMRVDRPQVTISLDKSGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + LE++ V  G I + ++ S + +  ++L+  ISA          
Sbjct: 120 VDWAIRPSTPLDPTKIRLERLSVSDGTITLREEASGRSHTATELDAVISA---------- 169

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +T+     + ++ ++ ++ P A P   +  G++   
Sbjct: 170 -NSLAGPWQANGSLVLQGEKLAIDLTSGEAKPDGSLRVRARISPKAIPATFETDGDVTVT 228

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKK--------SRLSGNFKISDGNVRISRYKLQSI 293
           E +  Y+G FS+          +              R++G FK        S ++++  
Sbjct: 229 EGRLDYAGDFSLRSSDMVAKTTKDQKTPTETPFFSGVRVTGQFKADRNRFDASEFRMEQG 288

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
             ++    + K  +   ++     S +G +     NE    E+        D
Sbjct: 289 PADNPYVVNGKAFIDYGDKPRFEVSADGQQLFWGPNEAASEEQSGSVMPVAD 340


>gi|254702130|ref|ZP_05163958.1| hypothetical protein Bsuib55_14899 [Brucella suis bv. 5 str. 513]
          Length = 658

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338


>gi|86358407|ref|YP_470299.1| hypothetical protein RHE_CH02803 [Rhizobium etli CFN 42]
 gi|86282509|gb|ABC91572.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 1236

 Score =  230 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 101/327 (30%), Positives = 164/327 (50%), Gaps = 12/327 (3%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M+ R L+ LG +  VVL  A   PLFIDWTDFR++FE QA+ I+GKK+ V G +   +LP
Sbjct: 1   MVGRFLVFLGGVIVVVLFVALLAPLFIDWTDFRKNFEDQASRIIGKKVTVHGTVDARLLP 60

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           FPSV   D+R+ Q+ DG+   K+E  SM AE  P LSGE  +FDM +  P +   L   G
Sbjct: 61  FPSVTLHDVRVGQEADGTPIVKVEQFSMDAELAPFLSGEALIFDMRVVNPKVRLRLLKDG 120

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +W +          V+LE +HV GG I  +D +S +   ++ LN ++SA+        
Sbjct: 121 TLDWMRGSRAEIPAKTVVLENVHVSGGEIDFLDDQSGRARRITGLNAEMSAK-------- 172

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
              S+ G    EG    D +   F I+++ P +   + ++ +L P  +P+ IDL G L  
Sbjct: 173 ---SLAGPWRVEGDAALDGEHGNFSISSSQPDEKGVLRMRTKLSPDKHPVSIDLDGELKL 229

Query: 241 NEKQPIYSGVFSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
            +++P Y G  S A    +   +   + +  RL G F++++  +RI  Y+++    +   
Sbjct: 230 VDRKPNYQGQLSAAIESGNSARSANKNEQPPRLKGRFELTNERIRIPEYRMEIGPTDDPY 289

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMH 326
               +  +          + +G +   
Sbjct: 290 VITGEATLDTGNAPEFLLTADGQQIDV 316


>gi|116253003|ref|YP_768841.1| hypothetical protein RL3260 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115257651|emb|CAK08748.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 1238

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 99/327 (30%), Positives = 162/327 (49%), Gaps = 12/327 (3%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M+ R L+ LG +  VVL  A   PLFIDWTDFR++FE QA+ I+GKK+ V G +   +LP
Sbjct: 1   MVGRFLVFLGGVIVVVLFVALLAPLFIDWTDFRKNFEDQASRIIGKKVTVYGTVDARLLP 60

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           FPSV   D+R+ Q+ DG+   K+E  SM AE  P LSGE  +FDM +  P +   L   G
Sbjct: 61  FPSVTLHDVRVGQEADGTPIVKVEQFSMDAELAPFLSGEALIFDMRVVNPKVRLRLLKDG 120

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +W +          V+LE +HV GG ++ ID +S +   ++ LN ++SA+        
Sbjct: 121 TLDWMRGSRAEIPARTVVLENVHVSGGEVEFIDDQSGRSRRITGLNAEMSAK-------- 172

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
              S+ G    EG    D +   F I+++ P +   + ++ +L P  +P+ +DL G L  
Sbjct: 173 ---SLAGPWRIEGDAALDGEHGGFSISSSQPDEKGVLRMRTRLSPDKHPVSVDLDGELKL 229

Query: 241 NEKQPIYSGVFSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
            + +P Y G  S A    +         +  R+ G F++++  +RI  Y+++    +   
Sbjct: 230 VDSKPNYQGQLSAAVEIRNSAKPANKKEQPPRVKGRFELTNERIRIPEYRMEIGPTDDPY 289

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMH 326
               +  +          + +G +   
Sbjct: 290 VITGEATLDTGNSPEFLLTADGQQIDV 316


>gi|241205510|ref|YP_002976606.1| hypothetical protein Rleg_2806 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859400|gb|ACS57067.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 1238

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 12/327 (3%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M+ R L+ LG +  VVL  A   PLFIDWTDFR++FE QA+ I+GKK+ V G +   +LP
Sbjct: 1   MVGRFLVFLGGVIVVVLFVALLAPLFIDWTDFRKNFEDQASRIIGKKVTVYGTVDARLLP 60

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           FPSV   D+R+ Q+ DG+   K+E  SM AE  P LSGE  +FDM I  P +   L   G
Sbjct: 61  FPSVTLHDVRVGQEADGTPIVKVEQFSMDAELAPFLSGEALIFDMRIVNPKVRLRLLKDG 120

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +W +          V+LE +HV GG ++ ID +S +   ++ LN ++SA+        
Sbjct: 121 TLDWMRGSRAEIPARTVVLENVHVSGGEVEFIDDQSGRSRRITGLNAEMSAK-------- 172

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
              S+ G    EG    D +   F I+++ P +   + ++ +L P  +P+ +DL G L  
Sbjct: 173 ---SLAGPWRIEGDAALDGEHGGFSISSSQPDEKGVLRMRTRLSPDKHPVSVDLDGELKL 229

Query: 241 NEKQPIYSGVFSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
            + +P Y G  S A    +         +  R+ G F++++  +RI  Y+++    +   
Sbjct: 230 VDSKPNYQGQLSAAIEIRNSAKPANKKEQPPRVKGRFELTNERIRIPEYRMEIGPTDDPY 289

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMH 326
               +  +          + +G +   
Sbjct: 290 VITGEATLDTGNAPEFLLTADGQQIDV 316


>gi|209550129|ref|YP_002282046.1| hypothetical protein Rleg2_2547 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209535885|gb|ACI55820.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 1234

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 105/351 (29%), Positives = 172/351 (49%), Gaps = 14/351 (3%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M+ R L+ LG +  VVL  A   PLFIDWTDFR++FE QA+ I+GKK+ V G +   +LP
Sbjct: 1   MVGRFLVFLGGVIVVVLFVALLAPLFIDWTDFRKNFEDQASRIIGKKVTVYGTVDARLLP 60

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           FPSV   D+R+ Q+ DG+   K+E  SM AE  P LSGE  +FDM +  P +   L   G
Sbjct: 61  FPSVTLHDVRVGQEADGTPIVKVEQFSMDAELAPFLSGEALIFDMRVVNPKVRLRLLKDG 120

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +W +         NV+LE +HV GG ++ ID +S +   ++ LN ++SA+        
Sbjct: 121 TLDWMRGSRAEIPAKNVVLENVHVNGGEVEFIDDQSGRSRRITGLNAEMSAK-------- 172

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
              S+ G    EG    D +  +F I+++ P +   + ++ +L P  +P+ IDL G L  
Sbjct: 173 ---SLAGPWRIEGNAALDGEHGSFLISSSQPDEKGVLRMRTKLSPDKHPVSIDLDGELKL 229

Query: 241 NEKQPIYSGVFSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
            + +P Y G  S A    +         +  R+ G F++++  +RI  Y+++    +   
Sbjct: 230 VDSKPNYQGQLSAAIESGNSAKPANKKEQPPRVKGRFELTNERIRIPEYRMEIGPTDDPY 289

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350
               +  +          + +G +   D+N      E  K  ++  +    
Sbjct: 290 VITGEATLDTGNAPEFLLTADGQQI--DVNRIGNQGEAGKTTRDPAVSARQ 338


>gi|190892532|ref|YP_001979074.1| hypothetical protein RHECIAT_CH0002947 [Rhizobium etli CIAT 652]
 gi|190697811|gb|ACE91896.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 1234

 Score =  227 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 98/327 (29%), Positives = 164/327 (50%), Gaps = 12/327 (3%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M+ R L+ LG +  V L  A   PLFIDWTDFR++FE QA+ I+GKK+ V G +   +LP
Sbjct: 1   MVGRFLVFLGGVIVVALFVALLAPLFIDWTDFRKNFEDQASRIIGKKVTVHGTVDARLLP 60

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           FPSV   D+R+ Q+ DG+   ++E  SM AE  P LSGE  +FDM +  P +   L   G
Sbjct: 61  FPSVTLHDVRVGQEADGTPIVRVEQFSMDAELAPFLSGEALIFDMRVVNPKVRLRLLKDG 120

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +W +          V+LE +HV GG ++ ID +S +   ++ LN ++SA+        
Sbjct: 121 TLDWMRGSRAEIPAKTVVLENVHVSGGEVEFIDDQSGRGRRITGLNAEMSAK-------- 172

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
              S+ G    EG    D +   F I+++ P +   + ++ +L P  +P+ IDL G L  
Sbjct: 173 ---SLAGPWRIEGDAALDGEHGNFSISSSQPDEKGVLHMRTKLSPDKHPVNIDLDGELKL 229

Query: 241 NEKQPIYSGVFSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
            +++P Y G  S A    +   +   + +  R+ G F++++  +RI  Y+++    +   
Sbjct: 230 VDRKPNYQGQLSAAIEHRNSAKSANKNEQPPRVKGRFELTNERIRIPEYRMEIGPTDDPY 289

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMH 326
               +  +          + +G +   
Sbjct: 290 VITGEATLDTGNAPEFLLTADGQQIDV 316


>gi|227822606|ref|YP_002826578.1| hypothetical protein NGR_c20620 [Sinorhizobium fredii NGR234]
 gi|227341607|gb|ACP25825.1| hypothetical protein NGR_c20620 [Sinorhizobium fredii NGR234]
          Length = 1247

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 91/347 (26%), Positives = 168/347 (48%), Gaps = 13/347 (3%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           ML R+ + +G L  + L  A   PLFI+WTDFR DFER+A+ I+GK + V G +   ++P
Sbjct: 1   MLARIFVIIGGLLVIALFVALIAPLFINWTDFRTDFEREASRIMGKPVVVHGSVDARLIP 60

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           FP+V   D+R+  +  G    ++   SM AE  P LSGE  +FDM +D+P     L   G
Sbjct: 61  FPTVTLNDVRVGAEAGGEPLIQVAQFSMSAELAPFLSGEALIFDMRLDRPKAKLRLQPDG 120

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +W +        + V+LE + +  G I+ +D+++ +   +S+L+  +SAR        
Sbjct: 121 TLDWARGPRAAIPANTVVLENVEIADGEIEFVDEQTGRTRRVSELSADVSAR-------- 172

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
              S+ G    +G+   D +  +F  T+N   +  A+SL+ +L P   P  ++L G L  
Sbjct: 173 ---SLAGPWKVDGSAALDGEAGSFSFTSNTVDEEGALSLRARLTPDERPFGVELDGELKV 229

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300
            + +P+Y+G F++  +          A   R++G F++++ ++R+  Y  ++  P+    
Sbjct: 230 VDFRPVYAGRFTLTENRPAEEVRSGGA--LRINGQFQLTNESIRVPEYHFEAGPPDDPYI 287

Query: 301 EDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347
              +  +   ++       +G +             +  +N    L+
Sbjct: 288 ITGEATLDTGKDQKFLLIADGQQIDVSRIGNSGRGGKTGRNPTVSLR 334


>gi|150397231|ref|YP_001327698.1| hypothetical protein Smed_2030 [Sinorhizobium medicae WSM419]
 gi|150028746|gb|ABR60863.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
          Length = 1246

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 98/347 (28%), Positives = 170/347 (48%), Gaps = 13/347 (3%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           ML R+L+ LG L  V L  A   PLFIDWT FR DFER+A+ I+GK + V G +   ++P
Sbjct: 1   MLARILVTLGGLLVVALFAALIAPLFIDWTSFRNDFEREASRIMGKPVVVHGSVDARLIP 60

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           FP+V   D+R+   + G    ++   SM AE  P LSGE  +FDM +D+P     L   G
Sbjct: 61  FPTVTLNDVRVGSSDGGPPLIQVAQFSMSAELAPFLSGEALIFDMRLDRPKARIRLQPDG 120

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +W +   T    H VILEK+ +  G I+ +D+++ +   +SDL+           + L
Sbjct: 121 TLDWARGSRTAIPAHTVILEKVEIADGEIEFVDEQTGRTRRVSDLS-----------ADL 169

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
           S  ++ G   AEG    D +  +F  T+N   +  A+SL+ +L P   P  ++L G+L  
Sbjct: 170 SARTLAGPWRAEGRAALDGEVGSFSFTSNAVDETGALSLRARLVPDERPFGVELDGSLKV 229

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300
            + +P+Y+G F++  +     N   +    R++G F++++ ++R+  Y  +   P+    
Sbjct: 230 VDFRPVYAGRFTLTENRP--ANEVKADGALRINGEFQLTNESIRVPEYHFEIGPPDDPYI 287

Query: 301 EDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347
              +  +   ++       +G +             +  ++    L+
Sbjct: 288 VTGEATLDTGKDQRFLLIADGQQIDVSRIGNSGSSGKTGRDPAISLR 334


>gi|15889338|ref|NP_355019.1| hypothetical protein Atu2052 [Agrobacterium tumefaciens str. C58]
 gi|15157178|gb|AAK87804.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 1234

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 101/361 (27%), Positives = 176/361 (48%), Gaps = 16/361 (4%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           ML R+L+ LG L ++VL  A  +P F+DWTDFR DFE QA+ I+GKK+ V G ++  +LP
Sbjct: 1   MLGRILVFLGGLLALVLFSALLIPYFVDWTDFRRDFEDQASRILGKKVVVHGRVEARLLP 60

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           FPSV   D+R     DGS   ++   SM AE  P LSGE R+FDM I++P     L   G
Sbjct: 61  FPSVTLHDVRAGTDADGSPLIQVARFSMDAELAPFLSGEARIFDMRIEEPKAKIRLLKDG 120

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +W +          V+LE + ++GG+I+ ID++S +   ++ LN           + +
Sbjct: 121 TLDWMRGSRAEIPARTVVLESVQIEGGQIEFIDEQSGRNRVVTGLN-----------ADM 169

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFP-AKNKAISLKIQLFPLAYPIIIDLFGNLF 239
           S +S+ G   AEG    D    +F ++++ P   N  + L+++L P  +P+ +DL G + 
Sbjct: 170 SANSLAGPWKAEGRAAVDGHPGSFSLSSSEPDYANGRMGLRLRLVPDEHPVEVDLDGAIA 229

Query: 240 WNEKQPIYSGVFSVA---GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
               +P YSG FS +    +  K    +      R  G+F++++ +VRI  Y+++     
Sbjct: 230 ATAGKPAYSGSFSFSFREDEKQKQQAGQSLFSSPRTRGSFELTNESVRIPSYRMELGASE 289

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEE-EKKNKNDDLKKDDIQYSV 355
           +      +  +    +     + +G +           +     +     +++    ++ 
Sbjct: 290 NPYIVTGEATLDTGAKPEFLLTADGQQIDVARFAPPVVQTGKTSRQPTVSVRQRVEAFAA 349

Query: 356 N 356
            
Sbjct: 350 M 350


>gi|325293421|ref|YP_004279285.1| hypothetical protein AGROH133_07317 [Agrobacterium sp. H13-3]
 gi|325061274|gb|ADY64965.1| hypothetical protein AGROH133_07317 [Agrobacterium sp. H13-3]
          Length = 1243

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 101/346 (29%), Positives = 172/346 (49%), Gaps = 15/346 (4%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           ML R+L+ LG L +VVL  A  +P F+DWTDFR DFE QA+ I+GKK+ V G ++  +LP
Sbjct: 1   MLGRILVFLGGLLAVVLFSALLIPYFVDWTDFRRDFEDQASRILGKKVVVHGRVEARLLP 60

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           FPSV   D+R     DGS   ++   SM AE  P LSGE R+FDM I++P     L   G
Sbjct: 61  FPSVTLHDVRAGTDADGSPLIQVARFSMDAELAPFLSGEARIFDMRIEEPKAKIRLLKDG 120

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +W +          V+LE + ++GG+I+ ID++S +   ++ LN           + +
Sbjct: 121 TLDWMRGSRAEIPARTVVLESVQIEGGQIEFIDEQSGRNRVVTGLN-----------ADM 169

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFP-AKNKAISLKIQLFPLAYPIIIDLFGNLF 239
           S +S+ G   AEG    D    +F ++++ P   N  + L+I++ P  +P+ +DL G + 
Sbjct: 170 SANSLAGPWKAEGRAAVDGHPGSFSLSSSEPDYANGRMGLRIRVVPDEHPVEVDLDGAIA 229

Query: 240 WNEKQPIYSGVFSVA---GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
               +P YSG F+ +       K    +      R  G+F++++ +VRI  Y+++     
Sbjct: 230 ATAGKPAYSGSFAFSFREDQKQKQQAGQSLFSSPRTRGSFELTNESVRIPSYRMELGGNE 289

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342
           +      +  +    +     + +G +   +       +  +   +
Sbjct: 290 NPYVVTGEATLDTGAKPEFLLTADGQQIDVNRFAPPVVQTGKTSRQ 335


>gi|306839218|ref|ZP_07472035.1| AsmA family protein [Brucella sp. NF 2653]
 gi|306405765|gb|EFM62027.1| AsmA family protein [Brucella sp. NF 2653]
          Length = 1247

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 81/350 (23%), Positives = 159/350 (45%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R S       + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSMPLDPTKIRVERLSINDGAVTLREEASGRSDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P   +  G++   
Sbjct: 169 ANSLAGPWQANGSFMLRGEKFAIDVSSGEAKPDGVLRVRARVSPDGFPATFETDGDVTMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    +    +    +     S +G +     NET   E+        D
Sbjct: 289 DNPYVVNGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338


>gi|254719441|ref|ZP_05181252.1| hypothetical protein Bru83_07838 [Brucella sp. 83/13]
          Length = 1247

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 81/350 (23%), Positives = 159/350 (45%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R S       + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSMPLDPTKIRVERLSINDGAVTLREEASGRSDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P   +  G++   
Sbjct: 169 ANSLAGPWQANGSFMLRGEKFAIDVSSGEAKPDGVLRVRARVSPDGFPATFETDGDVTMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    +    +    +     S +G +     NET   E+        D
Sbjct: 289 DNPYVVNGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338


>gi|256045039|ref|ZP_05447940.1| hypothetical protein Bmelb1R_11154 [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 1247

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G I   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDISARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338


>gi|326409432|gb|ADZ66497.1| AsmA family protein [Brucella melitensis M28]
 gi|326539138|gb|ADZ87353.1| AsmA family protein [Brucella melitensis M5-90]
          Length = 1247

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338


>gi|23502279|ref|NP_698406.1| hypothetical protein BR1408 [Brucella suis 1330]
 gi|23348253|gb|AAN30321.1| conserved hypothetical protein [Brucella suis 1330]
          Length = 1247

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 83/350 (23%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     + +G +     NET   E+        D
Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVNADGQQLFWGPNETAGEEQSVSAMPIAD 338


>gi|254710451|ref|ZP_05172262.1| hypothetical protein BpinB_09332 [Brucella pinnipedialis B2/94]
 gi|254714444|ref|ZP_05176255.1| hypothetical protein BcetM6_14113 [Brucella ceti M644/93/1]
 gi|254717342|ref|ZP_05179153.1| hypothetical protein BcetM_13242 [Brucella ceti M13/05/1]
 gi|256031945|ref|ZP_05445559.1| hypothetical protein BpinM2_15104 [Brucella pinnipedialis
           M292/94/1]
 gi|256160143|ref|ZP_05457837.1| hypothetical protein BcetM4_14114 [Brucella ceti M490/95/1]
 gi|256255349|ref|ZP_05460885.1| hypothetical protein BcetB_13884 [Brucella ceti B1/94]
          Length = 1247

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338


>gi|163843663|ref|YP_001628067.1| AsmA family protein [Brucella suis ATCC 23445]
 gi|163674386|gb|ABY38497.1| AsmA family protein [Brucella suis ATCC 23445]
          Length = 1247

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338


>gi|260169081|ref|ZP_05755892.1| AsmA family protein, involved in outer membrane biogenesis
           [Brucella sp. F5/99]
          Length = 1247

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338


>gi|256061466|ref|ZP_05451610.1| hypothetical protein Bneo5_14020 [Brucella neotomae 5K33]
          Length = 1247

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338


>gi|256369824|ref|YP_003107335.1| AsmA family protein, involved in outer membrane biogenesis
           [Brucella microti CCM 4915]
 gi|255999987|gb|ACU48386.1| AsmA family protein, involved in outer membrane biogenesis
           [Brucella microti CCM 4915]
          Length = 1247

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338


>gi|294852735|ref|ZP_06793408.1| hypothetical protein BAZG_01667 [Brucella sp. NVSL 07-0026]
 gi|294821324|gb|EFG38323.1| hypothetical protein BAZG_01667 [Brucella sp. NVSL 07-0026]
          Length = 1247

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRFDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338


>gi|254708081|ref|ZP_05169909.1| Alpha-isopropylmalate/homocitrate synthase [Brucella pinnipedialis
           M163/99/10]
          Length = 1247

 Score =  212 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338


>gi|306844307|ref|ZP_07476899.1| Alpha-isopropylmalate/homocitrate synthase [Brucella sp. BO1]
 gi|306275379|gb|EFM57120.1| Alpha-isopropylmalate/homocitrate synthase [Brucella sp. BO1]
          Length = 1247

 Score =  212 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 82/350 (23%), Positives = 159/350 (45%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G  + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGHPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSTPLDPTKIRVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P   +  G++   
Sbjct: 169 ANSLAGPWQANGSFMLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPATFETDGDVTMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    +    +    +     S +G +     NET   E+        D
Sbjct: 289 DNPYVVNGSALIDYGTKPHFEVSADGQQLFWGPNETAGEEQSVSTMPIAD 338


>gi|254704666|ref|ZP_05166494.1| AsmA family protein [Brucella suis bv. 3 str. 686]
          Length = 1247

 Score =  212 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 83/350 (23%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRNDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     + +G +     NET   E+        D
Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVNADGQQLFWGPNETAGEEQSVSAMPIAD 338


>gi|265984445|ref|ZP_06097180.1| AsmA family protein [Brucella sp. 83/13]
 gi|264663037|gb|EEZ33298.1| AsmA family protein [Brucella sp. 83/13]
          Length = 1254

 Score =  212 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 82/350 (23%), Positives = 159/350 (45%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 8   LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 68  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R S       + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 127 VDWAIRPSMPLDPTKIRVERLSINDGAVTLREEASGRSDTASALNAV-----------LS 175

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P   +  G++   
Sbjct: 176 ANSLAGPWQANGSFMLRGEKFAIDVSSGEAKPDGVLRVRARVSPDGFPATFETDGDVTMT 235

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    +    +    +     S +G +     NET   E+        D
Sbjct: 296 DNPYVVNGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 345


>gi|161619356|ref|YP_001593243.1| AsmA family protein [Brucella canis ATCC 23365]
 gi|161336167|gb|ABX62472.1| AsmA family protein [Brucella canis ATCC 23365]
          Length = 1247

 Score =  212 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 83/350 (23%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRNDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     + +G +     NET   E+        D
Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVNADGQQLFWGPNETAGEEQSVSAMPIAD 338


>gi|225852890|ref|YP_002733123.1| AsmA family protein [Brucella melitensis ATCC 23457]
 gi|225641255|gb|ACO01169.1| AsmA family protein [Brucella melitensis ATCC 23457]
          Length = 1247

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 162/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK    +  +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADREHFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338


>gi|256113962|ref|ZP_05454745.1| hypothetical protein Bmelb3E_14355 [Brucella melitensis bv. 3 str.
           Ether]
          Length = 1247

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 83/350 (23%), Positives = 160/350 (45%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM  E +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDTELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEEKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338


>gi|62290301|ref|YP_222094.1| hypothetical protein BruAb1_1403 [Brucella abortus bv. 1 str.
           9-941]
 gi|82700225|ref|YP_414799.1| alpha-isopropylmalate/homocitrate synthase AsmA [Brucella
           melitensis biovar Abortus 2308]
 gi|189024535|ref|YP_001935303.1| Alpha-isopropylmalate/homocitrate synthase [Brucella abortus S19]
 gi|254689603|ref|ZP_05152857.1| Alpha-isopropylmalate/homocitrate synthase [Brucella abortus bv. 6
           str. 870]
 gi|254697745|ref|ZP_05159573.1| Alpha-isopropylmalate/homocitrate synthase [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254730634|ref|ZP_05189212.1| Alpha-isopropylmalate/homocitrate synthase [Brucella abortus bv. 4
           str. 292]
 gi|256257852|ref|ZP_05463388.1| Alpha-isopropylmalate/homocitrate synthase [Brucella abortus bv. 9
           str. C68]
 gi|297248689|ref|ZP_06932407.1| alpha-isopropylmalate/homocitrate synthase:AsmA [Brucella abortus
           bv. 5 str. B3196]
 gi|62196433|gb|AAX74733.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616326|emb|CAJ11383.1| Alpha-isopropylmalate/homocitrate synthase:AsmA [Brucella
           melitensis biovar Abortus 2308]
 gi|189020107|gb|ACD72829.1| Alpha-isopropylmalate/homocitrate synthase [Brucella abortus S19]
 gi|297175858|gb|EFH35205.1| alpha-isopropylmalate/homocitrate synthase:AsmA [Brucella abortus
           bv. 5 str. B3196]
          Length = 1247

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQFVSAMPIAD 338


>gi|254694093|ref|ZP_05155921.1| Alpha-isopropylmalate/homocitrate synthase [Brucella abortus bv. 3
           str. Tulya]
          Length = 1247

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSTPLDPIKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQFVSAMPIAD 338


>gi|260565362|ref|ZP_05835846.1| alpha-isopropylmalate/homocitrate synthase [Brucella melitensis bv.
           1 str. 16M]
 gi|265991466|ref|ZP_06104023.1| AsmA family protein [Brucella melitensis bv. 1 str. Rev.1]
 gi|260151430|gb|EEW86524.1| alpha-isopropylmalate/homocitrate synthase [Brucella melitensis bv.
           1 str. 16M]
 gi|263002250|gb|EEZ14825.1| AsmA family protein [Brucella melitensis bv. 1 str. Rev.1]
          Length = 1254

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 86/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G I   +LPF
Sbjct: 8   LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDISARLLPF 67

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 68  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 175

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 345


>gi|148559250|ref|YP_001259303.1| hypothetical protein BOV_1365 [Brucella ovis ATCC 25840]
 gi|148370507|gb|ABQ60486.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
          Length = 1247

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 1   MGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 61  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLGKDGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 120 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 169 ANSLAGPWQANGSFVLRGEKFAINLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 228

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 229 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 288

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 289 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 338


>gi|17986883|ref|NP_539517.1| hypothetical protein BMEI0600 [Brucella melitensis bv. 1 str. 16M]
 gi|17982523|gb|AAL51781.1| hypothetical membrane spanning protein [Brucella melitensis bv. 1
           str. 16M]
          Length = 1226

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 79/329 (24%), Positives = 150/329 (45%), Gaps = 18/329 (5%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82
           +P F+DW+ +R DFER+A+ I+G+ + V G I   +LPFPSV F D+R+   +       
Sbjct: 1   MPPFVDWSGYRADFEREASRILGRPVTVAGDISARLLPFPSVTFSDVRV-GADAAHPVMT 59

Query: 83  IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKI 142
           ++  SM AE +P L G++ +FDM +++P +   L   G  +W  R ST      + +E++
Sbjct: 60  VDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGKVDWAIRPSTPLDPTKIGVERL 119

Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202
            +  G + + ++ S +    S LN             LS +S+ G   A G+     ++ 
Sbjct: 120 SINDGVVTLREEASGRSDTASALNAV-----------LSANSLAGPWQANGSFVLRGEKF 168

Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS-KLL 261
           A  +++     +  + ++ ++ P  +P I +  G++   + +  Y+G FS+         
Sbjct: 169 AIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMTDGRLDYAGDFSLRSSDMVATA 228

Query: 262 NLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN 316
            L+  A+K      R+SG FK       +S ++++    ++    D    +    +    
Sbjct: 229 GLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPADNPYVVDGSALIDYGAKPHFE 288

Query: 317 FSENGAESMHDLNETDFFEEEEKKNKNDD 345
            S +G +     NET   E+        D
Sbjct: 289 VSADGQQLFWGPNETAGEEQSVSAMPIAD 317


>gi|261219171|ref|ZP_05933452.1| AsmA family protein [Brucella ceti M13/05/1]
 gi|261222551|ref|ZP_05936832.1| AsmA family protein [Brucella ceti B1/94]
 gi|261318021|ref|ZP_05957218.1| AsmA family protein [Brucella pinnipedialis B2/94]
 gi|261322232|ref|ZP_05961429.1| AsmA family protein [Brucella ceti M644/93/1]
 gi|265989052|ref|ZP_06101609.1| AsmA family protein [Brucella pinnipedialis M292/94/1]
 gi|265998516|ref|ZP_06111073.1| AsmA family protein [Brucella ceti M490/95/1]
 gi|260921135|gb|EEX87788.1| AsmA family protein [Brucella ceti B1/94]
 gi|260924260|gb|EEX90828.1| AsmA family protein [Brucella ceti M13/05/1]
 gi|261294922|gb|EEX98418.1| AsmA family protein [Brucella ceti M644/93/1]
 gi|261297244|gb|EEY00741.1| AsmA family protein [Brucella pinnipedialis B2/94]
 gi|262553140|gb|EEZ08974.1| AsmA family protein [Brucella ceti M490/95/1]
 gi|264661249|gb|EEZ31510.1| AsmA family protein [Brucella pinnipedialis M292/94/1]
          Length = 1254

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 8   LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 68  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 175

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 345


>gi|225627860|ref|ZP_03785897.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|261758587|ref|ZP_06002296.1| alpha-isopropylmalate/homocitrate synthase [Brucella sp. F5/99]
 gi|225617865|gb|EEH14910.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|261738571|gb|EEY26567.1| alpha-isopropylmalate/homocitrate synthase [Brucella sp. F5/99]
          Length = 1254

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 8   LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 68  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 175

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 345


>gi|261325473|ref|ZP_05964670.1| AsmA family protein [Brucella neotomae 5K33]
 gi|261301453|gb|EEY04950.1| AsmA family protein [Brucella neotomae 5K33]
          Length = 1254

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 8   LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 68  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 175

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 345


>gi|261315582|ref|ZP_05954779.1| AsmA family protein [Brucella pinnipedialis M163/99/10]
 gi|261304608|gb|EEY08105.1| AsmA family protein [Brucella pinnipedialis M163/99/10]
          Length = 1254

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 8   LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 68  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 175

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 345


>gi|261755360|ref|ZP_05999069.1| AsmA family protein [Brucella suis bv. 3 str. 686]
 gi|261745113|gb|EEY33039.1| AsmA family protein [Brucella suis bv. 3 str. 686]
          Length = 1254

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 8   LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 68  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRNDTASALNAV-----------LS 175

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     + +G +     NET   E+        D
Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVNADGQQLFWGPNETAGEEQSVSAMPIAD 345


>gi|260566086|ref|ZP_05836556.1| alpha-isopropylmalate/homocitrate synthase [Brucella suis bv. 4
           str. 40]
 gi|260155604|gb|EEW90684.1| alpha-isopropylmalate/homocitrate synthase [Brucella suis bv. 4
           str. 40]
          Length = 1254

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 8   LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 68  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRNDTASALNAV-----------LS 175

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     + +G +     NET   E+        D
Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVNADGQQLFWGPNETAGEEQSVSAMPIAD 345


>gi|265999398|ref|ZP_05466160.2| alpha-isopropylmalate/homocitrate synthase [Brucella melitensis bv.
           2 str. 63/9]
 gi|263093679|gb|EEZ17684.1| alpha-isopropylmalate/homocitrate synthase [Brucella melitensis bv.
           2 str. 63/9]
          Length = 1254

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 85/350 (24%), Positives = 162/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 8   LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 68  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 175

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK    +  +S ++++    
Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADREHFDVSEFRMEQGPA 295

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 345


>gi|265995304|ref|ZP_06107861.1| AsmA family protein [Brucella melitensis bv. 3 str. Ether]
 gi|262766417|gb|EEZ12206.1| AsmA family protein [Brucella melitensis bv. 3 str. Ether]
          Length = 1254

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 160/350 (45%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 8   LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM  E +P L G++ +FDM +++P +   L   G 
Sbjct: 68  PSVTFSDVRV-GADAAHPVMTVDRFSMDTELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 175

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEEKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 345


>gi|237815808|ref|ZP_04594805.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|260546844|ref|ZP_05822583.1| alpha-isopropylmalate/homocitrate synthase [Brucella abortus NCTC
           8038]
 gi|260755131|ref|ZP_05867479.1| AsmA family protein [Brucella abortus bv. 6 str. 870]
 gi|260758350|ref|ZP_05870698.1| AsmA family protein [Brucella abortus bv. 4 str. 292]
 gi|260762176|ref|ZP_05874519.1| AsmA family protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884143|ref|ZP_05895757.1| AsmA family protein [Brucella abortus bv. 9 str. C68]
 gi|237789106|gb|EEP63317.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|260095894|gb|EEW79771.1| alpha-isopropylmalate/homocitrate synthase [Brucella abortus NCTC
           8038]
 gi|260668668|gb|EEX55608.1| AsmA family protein [Brucella abortus bv. 4 str. 292]
 gi|260672608|gb|EEX59429.1| AsmA family protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675239|gb|EEX62060.1| AsmA family protein [Brucella abortus bv. 6 str. 870]
 gi|260873671|gb|EEX80740.1| AsmA family protein [Brucella abortus bv. 9 str. C68]
          Length = 1254

 Score =  209 bits (532), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 8   LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 68  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 127 VDWAIRPSTPLDPTKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 175

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQFVSAMPIAD 345


>gi|307319667|ref|ZP_07599092.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
 gi|306894598|gb|EFN25359.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
          Length = 1234

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 87/334 (26%), Positives = 160/334 (47%), Gaps = 13/334 (3%)

Query: 14  SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73
            V L  A   PLFIDWT FR DFER+A+ I+GK + V G +   ++PFP+V   D+R+  
Sbjct: 2   VVALFAALIAPLFIDWTSFRNDFEREASRIMGKPVVVHGSVDARLIPFPTVTLNDVRVGA 61

Query: 74  KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM 133
            + G+   ++   SM AE  P LSGE  +FDM +D+P     L   G  +W +       
Sbjct: 62  SDGGAPLIQVAQFSMSAELAPFLSGEALIFDMRLDRPKARLRLQPDGTLDWARGSRAAIP 121

Query: 134 IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193
            H VILEK+ +  G I+ +D+++ +   +SDL+           + LS  ++ G    EG
Sbjct: 122 AHTVILEKVEIADGEIEFVDEQTGRTRRVSDLS-----------ADLSARTLAGPWRVEG 170

Query: 194 TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253
               D +  +F +++N   +  A+SL+ +L P   P  ++L G+L   + +P+Y+G F++
Sbjct: 171 RATLDGEAGSFSLSSNTVDETGALSLRARLVPDERPFGVELDGDLKIVDFRPVYAGRFTL 230

Query: 254 AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313
             +         +    R++G F++++ ++R+  Y  +   P+       +  +   ++ 
Sbjct: 231 TENRPASE--VKADGALRINGEFQLTNESIRVPEYHFEIGPPDDPYIVTGEATLDTGKDQ 288

Query: 314 LLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347
                 +G +             +  ++    L+
Sbjct: 289 RFLLIADGQQIDVSRIGNSGSSGKTGRDPAISLR 322


>gi|261214392|ref|ZP_05928673.1| AsmA family protein [Brucella abortus bv. 3 str. Tulya]
 gi|260915999|gb|EEX82860.1| AsmA family protein [Brucella abortus bv. 3 str. Tulya]
          Length = 1254

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 8   LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVTVAGDVSARLLPF 67

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +++P +   L   G 
Sbjct: 68  PSVTFSDVRV-GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGK 126

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + +E++ +  G + + ++ S +    S LN             LS
Sbjct: 127 VDWAIRPSTPLDPIKIGVERLSINDGVVTLREEASGRSDTASALNAV-----------LS 175

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     ++ A  +++     +  + ++ ++ P  +P I +  G++   
Sbjct: 176 ANSLAGPWQANGSFVLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPAIFETDGDVAMT 235

Query: 242 EKQPIYSGVFSVAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
           + +  Y+G FS+          L+  A+K      R+SG FK       +S ++++    
Sbjct: 236 DGRLDYAGDFSLRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPA 295

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           ++    D    +    +     S +G +     NET   E+        D
Sbjct: 296 DNPYVVDGSALIDYGAKPHFEVSADGQQLFWGPNETAGEEQFVSAMPIAD 345


>gi|15965890|ref|NP_386243.1| hypothetical protein SMc01454 [Sinorhizobium meliloti 1021]
 gi|307308200|ref|ZP_07587909.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
 gi|15075159|emb|CAC46716.1| Hypothetical protein SMc01454 [Sinorhizobium meliloti 1021]
 gi|306901198|gb|EFN31804.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
          Length = 1234

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 86/334 (25%), Positives = 159/334 (47%), Gaps = 13/334 (3%)

Query: 14  SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73
            V L  A   PLFIDWT FR DFER+A+ I+GK + V G +   ++PFP+V   D+R+  
Sbjct: 2   VVALFAALIAPLFIDWTSFRNDFEREASRIMGKPVVVHGSVDARLIPFPTVTLNDVRVGA 61

Query: 74  KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM 133
            + G+   ++   SM AE  P LSGE  +FDM +D+P     L   G  +W +       
Sbjct: 62  SDGGAPLIQVAQFSMSAELAPFLSGEALIFDMRLDRPKARLRLQPDGTLDWARGSRAAIP 121

Query: 134 IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193
            H VILEK+ +  G I+ +D+++ +   +SDL+           + LS  ++ G    EG
Sbjct: 122 AHTVILEKVEIADGEIEFVDEQTGRTRRVSDLS-----------ADLSARTLAGPWRVEG 170

Query: 194 TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253
               D +  +F +++N   +  A+SL+ +L P   P  ++L G+L   + + +Y+G F++
Sbjct: 171 RATLDGEAGSFSLSSNTVDETGALSLRARLVPDERPFGVELDGDLKIVDFRAVYAGRFTL 230

Query: 254 AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313
             +         +    R++G F++++ ++R+  Y  +   P+       +  +   ++ 
Sbjct: 231 TENRPASE--VKADGALRINGEFQLTNESIRVPEYHFEIGPPDDPYIVTGEATLDTGKDQ 288

Query: 314 LLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347
                 +G +             +  ++    L+
Sbjct: 289 RFLLIADGQQIDVSRIGNSGSSGKTGRDPAISLR 322


>gi|239832285|ref|ZP_04680614.1| Translation initiation factor IF-2 [Ochrobactrum intermedium LMG
           3301]
 gi|239824552|gb|EEQ96120.1| Translation initiation factor IF-2 [Ochrobactrum intermedium LMG
           3301]
          Length = 1284

 Score =  207 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 90/352 (25%), Positives = 160/352 (45%), Gaps = 20/352 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L R+ + +G L  ++L  A  VP F+DW+ +R DFER+A+ I+G+ + V G +   +LPF
Sbjct: 7   LGRIFVIVGGLLVLLLTAALVVPPFVDWSGYRADFEREASRILGRPVKVAGDVSARLLPF 66

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PSV F D+R+   +       ++  SM AE +P L G++ +FDM +D+P     L   G 
Sbjct: 67  PSVAFSDVRV-GADAAQPVMTVDTFSMDAELMPFLRGQLLIFDMRVDRPRATISLDRDGK 125

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W  R ST      + LE++ VK G I + ++ S + +  ++LN  ISA          
Sbjct: 126 VDWAIRPSTPLDPAKIKLERLSVKDGTITLREEASGRSHTATELNAVISA---------- 175

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S+ G   A G+     +R A  +T+     + ++ ++ ++ P A P   +  G++   
Sbjct: 176 -NSLAGPWQANGSLVLRGERLAIDLTSGEAKPDGSLRVRARISPDAIPATFETDGDVTVT 234

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKK--------SRLSGNFKISDGNVRISRYKLQSI 293
           E +  Y+G FS+          +              R++G FK        S ++++  
Sbjct: 235 EGRLDYAGDFSLRSSDMVAKTGKDQKAPAETPFFSGVRVTGKFKADRSRFDASEFRMEQG 294

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
             ++    + K  +   EE     S +G +     NE    E+        D
Sbjct: 295 PADNPYVVNGKAFIDYGEEPRFEVSADGQQLYWGPNEAASEEQTGSDMPIAD 346


>gi|222086401|ref|YP_002544935.1| hypothetical protein Arad_2939 [Agrobacterium radiobacter K84]
 gi|221723849|gb|ACM27005.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 1234

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 93/323 (28%), Positives = 163/323 (50%), Gaps = 12/323 (3%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI 83
           PLFIDWTDFR++FE QA+ I+GKK+ V G +   +LPFPSV   D+R+ Q+ DG+   +I
Sbjct: 24  PLFIDWTDFRKNFEDQASRIIGKKVTVHGTVDARLLPFPSVTLHDVRVGQEADGTPLVQI 83

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIH 143
              SM AE  P LSGE  +FDM + +P +   L   G  +W +         +V+LE +H
Sbjct: 84  AQFSMDAELAPFLSGEALIFDMRVSEPKVRLRLLKDGTLDWMRGSQPEMPAKSVVLESVH 143

Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203
           V GG I+ ID++S +   ++  N ++SA+           S+ G    EG    D +  +
Sbjct: 144 VDGGDIQFIDEQSGRTRHITGFNAEMSAK-----------SLAGPWRIEGDAALDGEHGS 192

Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL 263
           F I+++ P  +  + ++ +L P  +P+I+DL G L   +++P Y G+F+   +  +    
Sbjct: 193 FTISSSQPDDSGVLRVRTRLNPDRHPLIVDLDGELKLVDRKPDYLGLFTAGIEDKQARKA 252

Query: 264 ELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
                + R+ G F++++  +RI  Y+L+    +       +  +    +     + +G +
Sbjct: 253 ADEQAQPRVKGRFELTNERIRIPEYRLEVGAADDPYVVTGEATLDTGTKPEFLLTADGQQ 312

Query: 324 SMHD-LNETDFFEEEEKKNKNDD 345
              + L  T     +  +N    
Sbjct: 313 IDVNRLGNTQGSNGKTNRNPAIS 335


>gi|222149089|ref|YP_002550046.1| hypothetical protein Avi_2828 [Agrobacterium vitis S4]
 gi|221736074|gb|ACM37037.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 1230

 Score =  198 bits (504), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 99/347 (28%), Positives = 164/347 (47%), Gaps = 17/347 (4%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           ML R+ I  G L  V L  A   PLF++WTDFR+DFE QA+ ++GKK+ V G ++  ILP
Sbjct: 1   MLGRLFIAFGGLVVVALFAALLAPLFVNWTDFRKDFEDQASRLLGKKVVVHGAVEARILP 60

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           FPS+   D+ +    DG   + +   SM AE  P LSGE R+F M I+QP++   L   G
Sbjct: 61  FPSITMNDVTVGPGTDGKTLAHVARFSMDAELAPFLSGEARIFAMRIEQPNVRLRLLPDG 120

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +W Q         NV+LEK+ V  G + ++DQ++ +   ++ LN  ++AR        
Sbjct: 121 SLDWLQGSQPSLPGRNVVLEKVTVVDGAVTLVDQQTGRTRQINGLNADMTAR-------- 172

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPA-KNKAISLKIQLFPLAYPIIIDLFGNLF 239
              S+ G     G G  D +   F +++  P     A+ +KI + P A P+ IDL G+L 
Sbjct: 173 ---SLAGPWTVLGQGALDGQSGNFSLSSLQPDPAKGAVPVKIHIAPDATPVDIDLSGDLA 229

Query: 240 WNEKQPIYSGVF-SVAGDFSKLLNLELSAK----KSRLSGNFKISDGNVRISRYKLQSIL 294
             +K+P   G F +     ++   +           R+ G F++++  VRI  Y+++   
Sbjct: 230 LVDKRPTLQGSFLAALRANAEDGQVSAPMGNPVLPPRIKGKFELANDRVRIPEYRMEIGA 289

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341
            +       +  +   +      +  G +   D       + +  + 
Sbjct: 290 SDQPYIITGEATLDSGKAPEFLLTAEGQQIDVDKLTPSLPKGKTGRQ 336


>gi|163758985|ref|ZP_02166071.1| hypothetical protein HPDFL43_04455 [Hoeflea phototrophica DFL-43]
 gi|162283389|gb|EDQ33674.1| hypothetical protein HPDFL43_04455 [Hoeflea phototrophica DFL-43]
          Length = 1281

 Score =  197 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 76/349 (21%), Positives = 151/349 (43%), Gaps = 19/349 (5%)

Query: 14  SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73
            + L  A   P FIDWT +R  FE +A+ IVG+++ V+G     +LPFPSV F D+ +  
Sbjct: 2   VLALFSALIAPYFIDWTSYRTAFEAEASRIVGQQVKVRGEADARLLPFPSVTFSDVVVG- 60

Query: 74  KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM 133
            +DG     I   SM AE  P LSGE+R+ DM ++ P +   +   G  +W  ++     
Sbjct: 61  -DDGEPAMTISRFSMDAELAPFLSGEVRIIDMRVENPDVAVRILEDGSLDWALKRKPTTP 119

Query: 134 IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193
              V+LE + V    I I+D+++ + + + D+N ++ A            S+ G  + E 
Sbjct: 120 GDTVVLENVTVNNANITIVDEQNGRTHQIRDINARVKA-----------GSLSGPWVIEA 168

Query: 194 TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253
            G    +R    I+      + +I +++++ P  +P+ ++  G     + +P+Y G+F+ 
Sbjct: 169 EGAIAGQRGGVSISTGLARDDGSIRMRMRVAPDQWPVFLETEGEARIADSKPLYDGLFNF 228

Query: 254 AGDFSKLLNLELSAKKSRL--SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE 311
           +  F        S  +  +   G+F  ++  + I  ++ +  L +       +  +    
Sbjct: 229 S-AFPDDNGAGTSPVRPLIVAKGDFAATNERLSIEEWRAEIGLSDDPYIVTGQATIDTGP 287

Query: 312 ENLLNFSENGAESMHDL---NETDFFEEEEKKNKNDDLKKDDIQYSVNK 357
                   +G +   D    ++     +    +          +++V  
Sbjct: 288 NPDFLLIADGQQINMDRLGADQAQGDTQSAAADATVAPVSLAERFAVFN 336


>gi|118590868|ref|ZP_01548268.1| hypothetical protein SIAM614_19446 [Stappia aggregata IAM 12614]
 gi|118436390|gb|EAV43031.1| hypothetical protein SIAM614_19446 [Stappia aggregata IAM 12614]
          Length = 1276

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 74/323 (22%), Positives = 125/323 (38%), Gaps = 22/323 (6%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDI 69
           G    +VLV A   P FIDWT +R  FE  A   +G K+ V G   + +LP PS+ F D+
Sbjct: 2   GVTVILVLVAALVGPFFIDWTVYRSTFESYAERALGHKVTVLGEADLRLLPAPSISFSDV 61

Query: 70  RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKS 129
           R+   ED      +    MR E   LL GEIRV DM +D+PHL   L   G  +W    +
Sbjct: 62  RVGGAED--PLLVVSRFDMRIELPSLLKGEIRVLDMELDRPHLALSLDEAGRLDWLTAMT 119

Query: 130 TMD-----MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
           +          ++  E + ++ G + I+D  S  +  + + NL +SAR           S
Sbjct: 120 SNGAIAKLAPDDLTFENVTIRDGALTIVDARSGDINRIDNGNLVVSAR-----------S 168

Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
           + G   A G+   +       +      ++  + +K  + P   P+     G L   +  
Sbjct: 169 LAGPFRAAGSLTLNGAPYTVSLATGRAQEDAGLRVKGDVTPTNRPVSFAFDGQLQVADAA 228

Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
           P + G F++A    +  +        +  G F      V +  ++ +    +        
Sbjct: 229 PEFDGRFTIASVALEENDPN----MWQAEGQFTADIAEVAVPEFEFRYGPEDRRLSMTGN 284

Query: 305 TKVSQDEENLLNFSENGAESMHD 327
             +    +          +   D
Sbjct: 285 ADLVYAGDKRFEIRARSKQVDLD 307


>gi|289664280|ref|ZP_06485861.1| hypothetical protein XcampvN_14743 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 661

 Score =  186 bits (472), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 55/388 (14%), Positives = 126/388 (32%), Gaps = 32/388 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR    +G     VLV  F +    DW   R   ER  +   G++  + G + + +    
Sbjct: 27  RRRRWWIGIGIVAVLVAIFML--LFDWNWLRGPVERAVSAKTGREFHL-GHLDVDLGRTI 83

Query: 63  SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           +V  + + +           +++    +  E  PLL G++++ ++ ++ P L     +  
Sbjct: 84  TVRGERLSLGNASWSKRGAMAELNAAEIDVELWPLLRGKLQLPEIRLEHPTLLLEAGNDS 143

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
               +    +        L ++ V  GR++ ID  S     +           +N ++P 
Sbjct: 144 HPGNWVFDQSDSDGSMPRLGRLLVNNGRLQYIDDASRSDVDV----------VINSLAPP 193

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNL 238
           S D     +  +G G +     + K     P +        +I L   A      + G L
Sbjct: 194 SSDQRAAPIGIDGKGRWKGYPFSLKGNTASPLELSQSEHPFRIDLRGSAGATRTHVRGTL 253

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSI 293
               +  ++    +++G   + L   +          +L G  +      R  ++   + 
Sbjct: 254 TNPFQFRVFDLQMALSGQDMEELYPLIGVAMPSTPPYKLDGRLRRDGDVWRYEKFTGTAG 313

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKK 348
             +         ++    +       + A    D ++   F     +    ++ N + KK
Sbjct: 314 DSD----LSGTAEIDLRNKRPF-LRADLASKRLDFDDLAGFVGAPPKTGANESANAEQKK 368

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGD 376
              Q + + +      +D          
Sbjct: 369 QAAQLAASARVLPTTPYDLSKLRAMDAQ 396


>gi|254505123|ref|ZP_05117274.1| AsmA family [Labrenzia alexandrii DFL-11]
 gi|222441194|gb|EEE47873.1| AsmA family [Labrenzia alexandrii DFL-11]
          Length = 1276

 Score =  185 bits (470), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 73/319 (22%), Positives = 129/319 (40%), Gaps = 22/319 (6%)

Query: 14  SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73
            +VLV A   P F+DWT +R  FE  A+ ++G ++ V G   + +LP P + F D+R+ +
Sbjct: 2   VLVLVTALVGPFFVDWTIYRSTFETYASRVLGHRVTVLGEADLRLLPAPYIRFSDVRVGE 61

Query: 74  KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-----FQRK 128
            ED      +    MR E  PLL GE RV DM +++PHL   L   G  +W         
Sbjct: 62  AED--PLLVVSRFDMRVELPPLLKGEFRVVDMALERPHLTLSLDEAGRLDWLTAVTADGA 119

Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188
                  +V LEK+ ++ G I +ID  + + + L + NL +SAR           ++ G 
Sbjct: 120 LADLPPEDVALEKVTIRDGAISVIDARTGETHSLDNGNLSVSAR-----------TLAGP 168

Query: 189 VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248
             A+G+   +    +  + +     N+++ LK  + P   P+     G L   +  P + 
Sbjct: 169 FRADGSLTLNGSAYSVSLASGRIRDNESLRLKGDVTPTDLPVTFSFDGALSETDAAPRFD 228

Query: 249 GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308
           G F +        +         + G F      V +  ++ +    +       +  + 
Sbjct: 229 GAFDITSVALDESDTN----TWSVDGQFSADIAEVAVPEFEFRFGPDDKRLSMTGEADLV 284

Query: 309 QDEENLLNFSENGAESMHD 327
              +          +   D
Sbjct: 285 YSGDRRFEVRAQSKQVDLD 303


>gi|294667434|ref|ZP_06732651.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292602767|gb|EFF46201.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 648

 Score =  185 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 58/388 (14%), Positives = 130/388 (33%), Gaps = 34/388 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR  IGLG + ++V        L  DW   R   ER  +   G++  + G + + +    
Sbjct: 16  RRWWIGLGIVAALVA----IFVLLFDWNWLRGPVERAVSAKTGREFHL-GHLDVDLGRIT 70

Query: 63  SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           +V  + + +           +++    +  EF PLL G++R+ ++ ++ P L     +  
Sbjct: 71  TVRGERLSLGNASWSKRGAMAELNAAEIDVEFWPLLRGKLRLPEIRLEHPTLLLEAGNDS 130

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
               +    +        L ++ V  GR++ ID  S     +           +N ++P 
Sbjct: 131 HPGNWVFDQSDGDGSMPRLGRLLVTNGRLQYIDDASRSDVDV----------AINSLAPP 180

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNL 238
           S D     +  +G G +     + K     P +        +I L   A      + G L
Sbjct: 181 SSDQRAAPIGIDGKGRWKGYPFSLKGNTASPLELSQSEHPFRIDLRGSAGATRTHVRGTL 240

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSI 293
               +  ++    +++G   + L   +          +L G  +      R  ++   + 
Sbjct: 241 TNPFQFRVFDLQMALSGQDMEDLYPLIGVAMPSTPPYKLDGRLRRDGDVWRYEKFTGTAG 300

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKK 348
             +         ++    +       + A    D ++   F     +    ++ N + KK
Sbjct: 301 DSD----LSGTAEIDLRNKRPF-LRADLASKRLDFDDLAGFVGAPPKTGTNESANAEQKK 355

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGD 376
              Q + + +      +D     +    
Sbjct: 356 QAAQLAASARVLPTTPYDLSKLRSMDAQ 383


>gi|294627295|ref|ZP_06705881.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292598377|gb|EFF42528.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 648

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 58/388 (14%), Positives = 130/388 (33%), Gaps = 34/388 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR  IGLG + ++V        L  DW   R   ER  +   G++  + G + + +    
Sbjct: 16  RRWWIGLGIVAALV----TIFVLLFDWNWLRGPVERAVSAKTGREFHL-GHLDVDLGRIT 70

Query: 63  SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           +V  + + +           +++    +  EF PLL G++R+ ++ ++ P L     +  
Sbjct: 71  TVRGERLSLGNASWSKRGAMAELNAAEIDVEFWPLLRGKLRLPEIRLEHPTLLLEAGNDS 130

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
               +    +        L ++ V  GR++ ID  S     +           +N ++P 
Sbjct: 131 HPGNWVFDQSGGDGSMPRLGRLLVTNGRLQYIDDASRSDVDV----------AINSLAPP 180

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNL 238
           S D     +  +G G +     + K     P +        +I L   A      + G L
Sbjct: 181 SSDQRAAPIGIDGKGRWKGYPFSLKGNTASPLELSQSEHPFRIDLRGSAGATRTHVRGTL 240

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSI 293
               +  ++    +++G   + L   +          +L G  +      R  ++   + 
Sbjct: 241 TNPFQFRVFDLQMALSGQDMEDLYPLIGVAMPSTPPYKLDGRLRRDGDVWRYEKFTGTAG 300

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKK 348
             +         ++    +       + A    D ++   F     +    ++ N + KK
Sbjct: 301 DSD----LSGTAEIDLRNKRPF-LRADLASKRLDFDDLAGFVGAPPKTGTNESANAEQKK 355

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGD 376
              Q + + +      +D     +    
Sbjct: 356 QAAQLAASARVLPTTPYDLSKLRSMDAQ 383


>gi|21243771|ref|NP_643353.1| hypothetical protein XAC3044 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21109360|gb|AAM37889.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 648

 Score =  182 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 57/388 (14%), Positives = 129/388 (33%), Gaps = 34/388 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR  IGLG + ++V        L  DW   R   ER  +   G++  + G + + +    
Sbjct: 16  RRWWIGLGIVAALVA----IFVLLFDWNWLRGPVERAVSAKTGREFHL-GHLDVDLGRIT 70

Query: 63  SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           +V  + + +           +++    +  EF PLL G++R+ ++ ++ P L     +  
Sbjct: 71  TVRGERLSLGNASWSKRGAMAELNAAEIDVEFWPLLRGKLRLPEIRLEHPTLLLEAGNDS 130

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
               +    +        L ++ V  GR++ ID  +     +           +N ++P 
Sbjct: 131 HPGNWVFDQSDGDGSMPRLGRLLVTNGRLQYIDDATRSDVDV----------AINSLAPP 180

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNL 238
           S D     +  +G G +     + K     P +        +I L   A      + G L
Sbjct: 181 SSDQRAAPIGIDGEGRWKGYPFSLKGNTASPLELSQSEHPFRIDLRGSAGATRTHVRGTL 240

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSI 293
               +  ++    +++G   + L   +          +L G  +      R  ++   + 
Sbjct: 241 TNPFQFRVFDLQMALSGQDMEDLYPLIGVAMPSTPPYKLDGRLRRDGDVWRYEKFTGTAG 300

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKK 348
             +         ++    +       + A    D ++   F     +    ++ N + KK
Sbjct: 301 DSD----LSGTAEIDLRNKRPF-LRADLASKRLDFDDLAGFVGAPPKTGNNESANAEQKK 355

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGD 376
              Q + + +      +D          
Sbjct: 356 QAAQLATSARVLPTTPYDLSKLRAMDAQ 383


>gi|289667404|ref|ZP_06488479.1| hypothetical protein XcampmN_02512 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 651

 Score =  182 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 55/388 (14%), Positives = 127/388 (32%), Gaps = 32/388 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR    +G     VLV  F +    DW   R   ER  +   G++  + G + + +    
Sbjct: 17  RRRRWWIGIGIVAVLVAIFML--LFDWNWLRGPVERAVSAKTGREFHL-GHLDVDLGRTI 73

Query: 63  SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           +V  + + +           +++    +  E  PLL G++++ ++ ++ P L     +  
Sbjct: 74  TVRGERLSLGNASWSKRGAMAELNAAEIDVELWPLLRGKLQLPEIRLEHPTLLLEAGNDS 133

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
               +    +        L ++ V  GR++ ID  S     +           +N ++P 
Sbjct: 134 HPGNWVFDQSDSDGSMPPLGRLLVNNGRLQYIDDASRSDVDV----------VINSLAPP 183

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNL 238
           S D     +  +G G +     + K     P +        +I L   A      + G L
Sbjct: 184 SSDQRAAPIGIDGKGRWKGYPFSLKGNTASPLELSQSEHPFRIDLRGSAGATRTHVRGTL 243

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSI 293
               +  ++    +++G   + L   +          +L G  +      R  ++   + 
Sbjct: 244 TNPFQFRVFDLQMALSGQDMEELYPLIGVAMPSTPPYKLDGRLRRDGDVWRYEKFTGTAG 303

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKK 348
             +         ++    +  +    + A    D ++   F     +    ++ N + KK
Sbjct: 304 DSD----LSGTAEIDLRNKRPI-LRADLASKRLDFDDLAGFVGAPPKTGANESANAEQKK 358

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGD 376
              Q + + +      +D          
Sbjct: 359 QAAQLAASARVLPTTPYDLSKLRAMDAQ 386


>gi|78048737|ref|YP_364912.1| AsmA family protein [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|78037167|emb|CAJ24912.1| AsmA family membrane protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 648

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 56/388 (14%), Positives = 127/388 (32%), Gaps = 34/388 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR  IGLG +  ++        L  DW   R   ER  +   G++  + G + + +    
Sbjct: 16  RRWWIGLGIVAVLI----TIFVLLFDWNWLRGPVERAVSAKTGREFHL-GHLDVDLGRIT 70

Query: 63  SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           +V  + + +           +++    +  EF PLL G +R+ ++ ++ P L     +  
Sbjct: 71  TVRGERLSLGNAPWSKRGAMAEMNAAEIDVEFWPLLRGSLRLPEIRLEHPTLLLEAGNDS 130

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
               +    +        L ++ V  GR++ ID  S     +           +N ++P 
Sbjct: 131 HPGNWVFDQSDGDGSMPRLGRLLVNNGRLQYIDDASRSDVDV----------AINSLAPP 180

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI--SLKIQLFPLAYPIIIDLFGNL 238
           S D     +  +G G +     + K     P +        +I L   A      + G L
Sbjct: 181 SSDQRAAPIGIDGKGRWKGYPFSLKGNTASPLELSQTEHPFRIDLRGSAGATRTHVRGTL 240

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSI 293
               +  ++    +++G   + L   +          +L G  +      R  ++   + 
Sbjct: 241 TNTFQFRVFDLQMALSGQDMEDLYPLIGVAMPSTPPYKLDGRLRRDGDVWRYEKFTGTAG 300

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKK 348
             +         ++    +       + A    D ++   F     +    ++ N + K+
Sbjct: 301 DSD----LSGTAEIDLRNKRPF-LRADLASKRLDFDDLAGFVGAPPKTGTNESANAEQKR 355

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGD 376
              Q + + +      +D          
Sbjct: 356 QAAQLAASHRVLPATPYDLSKLRAMDAQ 383


>gi|92118246|ref|YP_577975.1| hypothetical protein Nham_2736 [Nitrobacter hamburgensis X14]
 gi|91801140|gb|ABE63515.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 1275

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 70/329 (21%), Positives = 133/329 (40%), Gaps = 17/329 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++  L+GL   F V L+ A   P FIDW  FR  FE +A  ++G  + V GG+   +LP 
Sbjct: 1   MQTTLLGLAITFIVALIAALIGPYFIDWNRFRPQFEAEAARVIGAPVRVDGGLDARLLPS 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PS+  + + +    D     + + L++      L+ GE R  ++ I+   L+  L S G 
Sbjct: 61  PSLQLRSVVVGGPNDSGK-VRADNLAVEFSLGSLMRGEWRATELTINGVALDLGLDSGGR 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W         + +  ++++++  GR+ + D  S     L+D+                
Sbjct: 120 IDWPLSS-RSLDVASFSIDRLNLT-GRVALHDAASRSTLELNDV-----------AFSGD 166

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
           + S   SV  +G       R  F+I++       A  + + + P      IDL G L ++
Sbjct: 167 VRSSGASVRGDGNFELSGTRYPFRISSGQAGDGDASRVHVAIDPGTRAAFIDLDGILSFD 226

Query: 242 EKQPIYSGVFSVAG---DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
           E+ P + G  ++AG      K  + + S +  R+S   K      R+ + +      +++
Sbjct: 227 ERAPHFDGALTLAGAAEADGKNFSSDPSQRPWRVSAKVKADPKGARLEQVEASYGAGDAA 286

Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHD 327
                   V       ++      +   D
Sbjct: 287 LRLAGVGDVRFGASPRIHAELFARQLDAD 315


>gi|188990689|ref|YP_001902699.1| AsmA family membrane protein [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167732449|emb|CAP50643.1| AsmA family membrane protein [Xanthomonas campestris pv.
           campestris]
          Length = 651

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 52/386 (13%), Positives = 128/386 (33%), Gaps = 34/386 (8%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64
            LIG G + +++++         DW   R   ER  +   G++  + G + + +    +V
Sbjct: 21  WLIGTGIVLALIVILVLV----FDWNWLRGPVERAVSAKTGREFHL-GHLDVDLGRIVTV 75

Query: 65  FFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
             + + +           +++    +  EF PLL G++R+ ++ ++   +          
Sbjct: 76  RGEQLSLGNAAWSKRGPMAQMRSAEIDVEFWPLLRGKVRLPEIRLEHTKVVLEAGDDTHP 135

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
             +  +++        L ++ V+ GR++ ID  +     +           +N ++P   
Sbjct: 136 GNWVFETSGGDGTLPRLGRLLVQDGRLQYIDAANKSDVDV----------AINSLAPPRS 185

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI--SLKIQLFPLAYPIIIDLFGNLFW 240
           D     +  +G G +       K     P +        +I L   A      + G L  
Sbjct: 186 DQRAAPIGIDGKGRWKGYPFTLKGNTASPLELSQTEHPFRIDLRGSAGATRTHVRGTLTN 245

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYKLQSILP 295
             +  ++    +++G   + L               L G+ + +    R   +  ++   
Sbjct: 246 PFQFQVFDLQMALSGQDMEDLYPLTGVAIPSTPPYTLDGHLRRNGDIWRYEDFTGKAGDS 305

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKKDD 350
           +         +V    +       + A    D ++   F     +    ++ N + KK  
Sbjct: 306 D----LSGTAEVDLRNKRPF-LRADLASKRLDFDDLAGFVGAPPKTGANESANAEQKKRA 360

Query: 351 IQYSVNKKEEKDNSHDKENQENFSGD 376
            Q + + +   D  +D          
Sbjct: 361 AQLAADTRVLPDTPYDLSKLRAMDAQ 386


>gi|325914101|ref|ZP_08176454.1| hypothetical protein involved in outer membrane biogenesis
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325539604|gb|EGD11247.1| hypothetical protein involved in outer membrane biogenesis
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 665

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 63/388 (16%), Positives = 132/388 (34%), Gaps = 34/388 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR LIGLG + ++++V      L  DW   R   ER  +   G+   + G + + +    
Sbjct: 33  RRWLIGLGSVAAILVV----FVLLFDWNWLRGPVERIVSAKTGRDFHL-GHLHVDLGRTT 87

Query: 63  SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           +V  + +++           +++    +  E  PLL G++R+ ++ ++QP +     +  
Sbjct: 88  TVRGERLQLGNATWSKRGAMAEMNAAEIDVELWPLLRGKVRLPEIRLEQPSVLLEAGNDT 147

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
               +             L ++ V  GR++ ID  S      SD+++ I     N ++P 
Sbjct: 148 HPGNWVFDDRNSDGSMPRLGRLLVTKGRLQYIDDASR-----SDIDVAI-----NSLAPP 197

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNL 238
             D     +  +G G +       K     P +        +I L   A      + G L
Sbjct: 198 RSDQRAAPIGIDGKGRWKGYPFTLKGDTASPLELSQSEHPFRIDLRGSAGATRTHVRGTL 257

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYKLQSI 293
               +  ++    +++G   + L               L G  +      R  R+   + 
Sbjct: 258 TNPFQFRVFDLQMALSGQDMEDLYPLTGVAMPSTPPYTLDGRLRRDGDVWRYERFTGTAG 317

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKK 348
             +         +V    +  L    + A    D ++   F     +    ++ N + KK
Sbjct: 318 DSD----LSGTAEVDLRNKRPL-LRADLASKRLDFDDLAGFVGAPPKTGTDESANAEQKK 372

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGD 376
              Q + + +      +D          
Sbjct: 373 QAAQLAASARILPTTPYDLSKLRAMDAQ 400


>gi|21232292|ref|NP_638209.1| hypothetical protein XCC2861 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767574|ref|YP_242336.1| hypothetical protein XC_1247 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21114058|gb|AAM42133.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572906|gb|AAY48316.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 651

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 52/386 (13%), Positives = 128/386 (33%), Gaps = 34/386 (8%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64
            LIG G + +++++         DW   R   ER  +   G++  + G + + +    +V
Sbjct: 21  WLIGTGIVLALIVILVLV----FDWNWLRGPVERAVSAKTGREFHL-GHLDVDLGRIVTV 75

Query: 65  FFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
             + + +           +++    +  EF PLL G++R+ ++ ++   +          
Sbjct: 76  RGEQLSLGNAAWSKRGPMAQMRSAEIDVEFWPLLRGKVRLPEIRLEHTKVVLEAGDDTHP 135

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
             +  +++        L ++ V+ GR++ ID  +     +           +N ++P   
Sbjct: 136 GNWVFETSGGDGTLPRLGRLLVQDGRLQYIDAANKSDVDV----------AINSLAPPRS 185

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI--SLKIQLFPLAYPIIIDLFGNLFW 240
           D     +  +G G +       K     P +        +I L   A      + G L  
Sbjct: 186 DQRAAPIGIDGKGRWKAYPFTLKGNTASPLELSQTEHPFRIDLRGSAGATRTHVRGTLTN 245

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYKLQSILP 295
             +  ++    +++G   + L               L G+ + +    R   +  ++   
Sbjct: 246 PFQFQVFDLQMALSGQDMEDLYPLTGVAIPSTPPYTLDGHLRRNGDIWRYEDFTGKAGDS 305

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKKDD 350
           +         +V    +       + A    D ++   F     +    ++ N + KK  
Sbjct: 306 D----LSGTAEVDLRNKRPF-LRADLASKRLDFDDLAGFVGAPPKTGANESANAEQKKRA 360

Query: 351 IQYSVNKKEEKDNSHDKENQENFSGD 376
            Q + + +   D  +D          
Sbjct: 361 AQLAADTRVLPDTPYDLSKLRAMDAQ 386


>gi|328542986|ref|YP_004303095.1| AsmA family [polymorphum gilvum SL003B-26A1]
 gi|326412732|gb|ADZ69795.1| AsmA family [Polymorphum gilvum SL003B-26A1]
          Length = 1324

 Score =  179 bits (453), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 80/321 (24%), Positives = 129/321 (40%), Gaps = 22/321 (6%)

Query: 12  LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71
              + LV A   PLF+DWT +R  FER A   +G ++ V G   I +LP P+V F D+R+
Sbjct: 2   AVILALVAALVGPLFVDWTAYRSTFERYAQEALGHRVTVLGKADISLLPAPTVTFTDVRV 61

Query: 72  DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM 131
            + ED      +    MR E  PLL GEI+V +M +++PHL   L   G  +W   +S  
Sbjct: 62  GEAED--PLLVVSRFEMRVELPPLLKGEIQVTEMRLERPHLRLSLDEAGRLDWLTSRSAS 119

Query: 132 D-----MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186
           D         V+ E I +  G + ++D     V+ L   NL ISAR           S+ 
Sbjct: 120 DVLSGRDPKTVMFEHIEIDDGIVALVDARDGSVHRLEKANLLISAR-----------SLN 168

Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
           G    +GT +   K  + ++       +  I +K  + P   P+ + + GNL      P 
Sbjct: 169 GPYKIDGTVSHLQKPYSLRVATGERLADGKIRVKADVVPSTTPMELTIDGNLSQEAGAPA 228

Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
           ++G FSVA                R  G  ++    +    ++ +    +       +  
Sbjct: 229 FTGRFSVASVT----AATEPDIAWRAEGEVELGISRLSFPAFEFRYGPEDRLVTLSGQGH 284

Query: 307 VSQDEENLLNFSENGAESMHD 327
                        +  +   D
Sbjct: 285 ADLIGARRFEIRASAKQIDLD 305


>gi|27381647|ref|NP_773176.1| hypothetical protein bll6536 [Bradyrhizobium japonicum USDA 110]
 gi|27354815|dbj|BAC51801.1| bll6536 [Bradyrhizobium japonicum USDA 110]
          Length = 1206

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 68/327 (20%), Positives = 131/327 (40%), Gaps = 14/327 (4%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++  L+GL   F + L+ A   P FIDW  FR  FE +A  I+G  + V G +   +LP 
Sbjct: 1   MQTTLLGLAIAFIIALLAALIGPYFIDWNQFRPQFEAEAGRIIGVPVRVAGELDARLLPA 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P++  + +      D     + + L +      L+ GE R  ++ ++   ++  L ++G 
Sbjct: 61  PTLRLRSVTFGGNND-LGRLRADKLDVEFSLSALMRGEWRATELTVNGMAVDLGLDARGR 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +     S    + ++ +E++++  GRI + D  S     LSD+                
Sbjct: 120 VDLPSTASGTFNLASLAIERLNLT-GRIALHDAASRSTLELSDI-----------AFSGD 167

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
           + S+ GSV  +G       R  F+I++   A   A  L + + P    I+ DL G L ++
Sbjct: 168 VRSLAGSVRGDGRFTASGTRYPFRISSGPSADGSATRLHLNIDPGERAILADLEGVLAFD 227

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
            + P + G  ++A   +K    E      +L+   K      +  +        +++   
Sbjct: 228 NRLPKFDGALTLAVPAAKKAG-EAGPTPWKLTAKLKADPAGAKFDQIDASFGAEDNALKV 286

Query: 302 DNKTKVSQDEENLLNFSENGAESMHDL 328
                +      LL    +  +   D 
Sbjct: 287 GGVGDLRFGASPLLRAVLSARQIDADK 313


>gi|325925785|ref|ZP_08187158.1| hypothetical protein involved in outer membrane biogenesis
           [Xanthomonas perforans 91-118]
 gi|325543842|gb|EGD15252.1| hypothetical protein involved in outer membrane biogenesis
           [Xanthomonas perforans 91-118]
          Length = 651

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 56/388 (14%), Positives = 127/388 (32%), Gaps = 34/388 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR  IGLG +  ++        L  DW   R   ER  +   G++  + G + + +    
Sbjct: 19  RRWWIGLGIVAVLI----TIFVLLFDWNWLRGPVERAVSAKTGREFHL-GHLDVDLGRIT 73

Query: 63  SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           +V  + + +           +++    +  EF PLL G +R+ ++ ++ P L     +  
Sbjct: 74  TVRGERLSLGNALWSKRGAMAEMNAAEIDVEFWPLLRGSLRLPEIRLEHPTLLLEAGNDS 133

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
               +    +        L ++ V  GR++ ID  S     +           +N ++P 
Sbjct: 134 HPGNWVFDQSDGDGSMPRLGRLLVNNGRLQYIDDASRSDVDV----------AINSLAPP 183

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI--SLKIQLFPLAYPIIIDLFGNL 238
           S D     +  +G G +     + K     P +        +I L   A      + G L
Sbjct: 184 SSDQRAAPIGIDGKGRWKGYPFSLKGNTASPLELSQTEHPFRIDLRGSAGATRTHVRGTL 243

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSI 293
               +  ++    +++G   + L   +          +L G  +      R  ++   + 
Sbjct: 244 TNPFQFRVFDLQMALSGQDMEDLYPLIGVAMPSTPPYKLDGRLRRDGDVWRYEKFTGTAG 303

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKK 348
             +         ++    +       + A    D ++   F     +    ++ N + K+
Sbjct: 304 DSD----LSGTAEIDLRNKRPF-LRADLASKRLDFDDLAGFVGAPPKTGTNESANAEQKR 358

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGD 376
              Q + + +      +D          
Sbjct: 359 QAAQLAASPRVLPATPYDLSKLRAMDAQ 386


>gi|154245368|ref|YP_001416326.1| AsmA family protein [Xanthobacter autotrophicus Py2]
 gi|154159453|gb|ABS66669.1| AsmA family protein [Xanthobacter autotrophicus Py2]
          Length = 1331

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 75/381 (19%), Positives = 135/381 (35%), Gaps = 24/381 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +LI L     + + GAF  P  +DW  +R  FE Q +  +G  + ++G I   ILP 
Sbjct: 1   MQGILISLATAVILAIGGAFAAPFVVDWNAWRGTFETQISQALGVPVVIRGPIDAEILPA 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P +  +D+ +           ++ L        LL G++    + +D+P +   + S G 
Sbjct: 61  PRILLRDVTLGDVVSTGG--TVKALRAELSLGALLRGDMEATGVSLDRPQIRLVIDSAGR 118

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                  +       + + +  VK G + I+D+ SD+   L  LNL+  AR         
Sbjct: 119 L---ALPTGAQRPAALSIARFEVKDGTLDILDRASDRTQTLDGLNLKGEAR--------- 166

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
             S+ G    +G       R A + T      +    L++ L     P  +DL G L + 
Sbjct: 167 --SLAGPFRLDGEVEAQGARFAIRSTLGKIGDDGTGRLRLVLDGRNRPYALDLDGGLAFA 224

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
             +P + G   ++    +        +  +LSG  K S   V      L      +    
Sbjct: 225 GAKPKFEGRAILSRHGGE------GLEAWQLSGTLKASPDAVLADSLDLALGGAQTPAQL 278

Query: 302 DNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359
               +++      L+   N      D     TD      K     D              
Sbjct: 279 SGSARLALGRAVGLDAVLNARSLDLDALRAATDGTPNTAKDKATADQNPAAALARFLSGV 338

Query: 360 EKDNSHDKENQENFSGDKMIL 380
               S D  ++   S ++++L
Sbjct: 339 AALPSPDIASRVGLSVEQLML 359


>gi|85714695|ref|ZP_01045682.1| hypothetical protein NB311A_20971 [Nitrobacter sp. Nb-311A]
 gi|85698580|gb|EAQ36450.1| hypothetical protein NB311A_20971 [Nitrobacter sp. Nb-311A]
          Length = 1201

 Score =  175 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 70/383 (18%), Positives = 135/383 (35%), Gaps = 24/383 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++  L+GL     V L+ A   P FIDW  FR  FE +A  ++G  + V GGI   +LP 
Sbjct: 1   MQTTLLGLAITLIVALIAALIGPHFIDWNHFRSQFETEAARVIGAPVRVAGGIDARMLPS 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PS+  + + +    D   +   + L++      L+ GE R  ++ I+   L+  L+ +G 
Sbjct: 61  PSLRLESVLVGSPND-PGKVHADVLAVEFSLGSLMRGEWRATELTINGVALDLGLNERGQ 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             W           ++ ++++++  GR+   D  S     L+D+      R         
Sbjct: 120 LEWPL----SFNFGSLSVDQLNLT-GRVAFHDAASRSTLELNDVAFSGGVRPSG------ 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                 SV  +G       R  F+I+        A  + + + P  +     + G L ++
Sbjct: 169 -----ASVRGDGNFVLSGTRYPFQISFAQAGVGNASRVHVAIDPGTHAEFTGVDGMLSFD 223

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKK---SRLSGNFKISDGNVRISRYKLQSILPNSS 298
           E+ P + G   +AG                  R+S   K      R+ +  +     +S+
Sbjct: 224 EQTPRFDGTVKLAGAGEPANKNPSGFPAQRPWRVSAKVKADPKGARLGQIDVSYGKDDSA 283

Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD---LKKDDIQYSV 355
                +  +       L  + +  +   D           K  +       K    + + 
Sbjct: 284 LRLTGEGDIRFGSLPRLRATLSAPQLDADRLRAKDRNPPAKLLQALQRYLTKIPKPRLAA 343

Query: 356 N-KKEEKDNSHDKENQENFSGDK 377
           + K             ++F  D 
Sbjct: 344 DIKIGVDRIMLGDRPIQDFGADL 366


>gi|325920409|ref|ZP_08182339.1| hypothetical protein involved in outer membrane biogenesis
           [Xanthomonas gardneri ATCC 19865]
 gi|325549119|gb|EGD20043.1| hypothetical protein involved in outer membrane biogenesis
           [Xanthomonas gardneri ATCC 19865]
          Length = 630

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 49/382 (12%), Positives = 122/382 (31%), Gaps = 32/382 (8%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68
           +G    + +V  F +    +W   R   ER  +   G++  + G + + +    ++    
Sbjct: 2   IGLGIVLAIVAIFVL--LFEWNWLRGPVERAVSAKTGREFHL-GYLDVKLGRTTTIRGNR 58

Query: 69  IRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126
           + +           +++    +  E  PLL G +R+ ++ +D P +            + 
Sbjct: 59  LSLANAPWSKRGPMAELNSAEIDVEVWPLLRGNVRLPEIRLDHPKVLLEAGDDTHPGNWV 118

Query: 127 RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186
                       L ++ V  GR++ ID  +     +           +N ++P S D   
Sbjct: 119 FDQDDGDGTMPRLGRLLVDDGRLQYIDAANRSDVDV----------AINSLAPPSSDQRA 168

Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
             +  +G G +       K +   P +        +I L   A      + G L    + 
Sbjct: 169 APIGIDGKGRWKGYPFTLKGSTASPLELSQSEHPFRIDLRGSAGATRTHVRGTLTNPFQF 228

Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSST 299
            ++    +++G   + L              +L G+ + +    R   +   +   +   
Sbjct: 229 QVFDLQMALSGQDMQDLYPLTGVAMPSTPPYKLDGHLRRNGKIWRYETFTGTAGDSD--- 285

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKKDDIQYS 354
                 +V    +       + A    D ++   F     +    ++ N + KK   + +
Sbjct: 286 -LAGTAEVDLRNKRPF-LRADLASKRLDFDDLAGFVGAPPKTGANESANAEQKKQAAKLA 343

Query: 355 VNKKEEKDNSHDKENQENFSGD 376
            +++   +  +D          
Sbjct: 344 ASERVLPNTPYDLSKLRAMDAQ 365


>gi|90419197|ref|ZP_01227107.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336134|gb|EAS49875.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 1286

 Score =  172 bits (436), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 73/347 (21%), Positives = 136/347 (39%), Gaps = 36/347 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82
            P FIDWT +R DFERQA+ I+G+K+ V+G  +  +LPFPSV F D+ +   +DG     
Sbjct: 3   APYFIDWTAYRTDFERQASQILGRKVVVEGEAEARLLPFPSVTFGDVTVLG-DDGEALLT 61

Query: 83  IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKI 142
           I    M AE  P LSGEIR++ M +D P +   + + G  +W   +  +     V+LE +
Sbjct: 62  IARFRMDAELAPYLSGEIRIYSMTVDTPDIRVPVLADGTIDWVVERPAIPRGATVVLENV 121

Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202
            V+ G + + +  + + + L DLN           + LS  S+ G V   G+     +  
Sbjct: 122 AVENGTVTVENGLTGRTHRLEDLN-----------ATLSAGSLAGPVDGRGSIVVGGEVI 170

Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL-- 260
           AF +      +   + ++I+         + L G+    + +P ++G  +V         
Sbjct: 171 AFSVGIGTLQEGGDLPVRIETANETLATSLTLDGSASLKDGRPGFAGSIAVTRPLPPASV 230

Query: 261 ----------------------LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
                                  +   +    +  G   +S     +S  ++Q+      
Sbjct: 231 TAEELAAPDPFAAAAPEAAGEAASERPAVMPVKAVGAIVLSPTAAEVSDIRVQAGEATRP 290

Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
                + +         + +  G +   D    +   +  +     +
Sbjct: 291 YLLTGEGRFDFAGIPKFHLTLEGEQIDVDRIAAEENGDASQVLGLAE 337


>gi|115524154|ref|YP_781065.1| hypothetical protein RPE_2141 [Rhodopseudomonas palustris BisA53]
 gi|115518101|gb|ABJ06085.1| AsmA family protein [Rhodopseudomonas palustris BisA53]
          Length = 1188

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 60/326 (18%), Positives = 126/326 (38%), Gaps = 14/326 (4%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++  L+G+     + L+ A   P FIDW  FR  FE +A   +G  + V G +   +LP 
Sbjct: 1   MQATLLGIATAAILALIAALVGPYFIDWNQFRPRFEAEAARAIGAPVRVAGELDARLLPT 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P++  + + +    D     + + L +      L+ GE+   ++ I    L+  L ++G 
Sbjct: 61  PTLRLRQVVVGGAND-PGRVRADRLDVEFSLGSLMRGEVHASELTIGGFALDLGLDAQGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W    +    +  + ++++++  GRI + D        L+D+                
Sbjct: 120 LDWPAA-TAFTSLGALAIDRLNLT-GRIALHDARRRSTLELNDI-----------AFSGE 166

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
           + ++ G++  +G    D  R  F++ +N    N    L+  L       + DL G     
Sbjct: 167 VKALAGAIRGDGNFLVDGTRYPFRLWSNRAGDNAGSRLRFALESSERGWMADLEGLFSVE 226

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
            + P + G  ++A   ++       +   RL+G  K      R  + +       S+   
Sbjct: 227 ARTPRFDGALTLASVAARTPAEPTPSTPWRLTGKLKADPAGARFDQVEASFGAEASALRF 286

Query: 302 DNKTKVSQDEENLLNFSENGAESMHD 327
             + +        L+ S +  +   D
Sbjct: 287 AGQAEARFGAAPELSASLSARQLDLD 312


>gi|163796970|ref|ZP_02190926.1| AsmA [alpha proteobacterium BAL199]
 gi|159177717|gb|EDP62268.1| AsmA [alpha proteobacterium BAL199]
          Length = 1223

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/374 (15%), Positives = 120/374 (32%), Gaps = 47/374 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR++LIGL      ++     VP F+DW  ++ + +  A    G+ + ++G I + ILP 
Sbjct: 5   LRKLLIGLAITVVALIAAVLVVPSFVDWNGYKPEIQNAAKKATGRDLRLEGDIGLSILPS 64

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           PS+  + +     E G      +++ L +    LPLLSG++ V  + + +P +     + 
Sbjct: 65  PSLSVEKVAFANIEGGSEPQMVRLDSLRVHVALLPLLSGKVHVTSVTLIKPTIVLEKMAD 124

Query: 120 GVSNWFQR--------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
           G  NW                          + L+   ++ G +   D      + +  L
Sbjct: 125 GRVNWEFPVDGDAGAPASGGSGSGGAGSAPAIALDSAKIEDGTLLFRDAAGGTEHRIEAL 184

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
           N+            ++   ++G    +GT  +       + +A      +   +K  +  
Sbjct: 185 NV-----------TVAAGGLQGPFDVDGTFKYQGMPMTLQASAGRLDTQRPNPVKAVISA 233

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS---------------KLLNLELSAKKS 270
               +   + G+L      P + G  SV                      +    + ++ 
Sbjct: 234 AENALTATVSGSLDMT-GGPAFKGDASVDAPDLGKAVERLTAALGGAGPAVAPIGAGQRL 292

Query: 271 RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330
            +  +   S   V +S   +                V+      ++    G     D   
Sbjct: 293 SVKSSVDGSPKAVNLSDLVVTLGES----RLQGNIAVALAGGPSVDAKLTGNRLDLDALL 348

Query: 331 TDFFEEEEKKNKND 344
                 +    K  
Sbjct: 349 PSAKASDTAPPKTT 362


>gi|254229866|ref|ZP_04923271.1| AsmA protein [Vibrio sp. Ex25]
 gi|262393757|ref|YP_003285611.1| AsmA protein [Vibrio sp. Ex25]
 gi|151937635|gb|EDN56488.1| AsmA protein [Vibrio sp. Ex25]
 gi|262337351|gb|ACY51146.1| AsmA protein [Vibrio sp. Ex25]
          Length = 695

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 55/431 (12%), Positives = 133/431 (30%), Gaps = 62/431 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L+ L     V+LV    + +F++   F+     QA    G ++ ++G I     P 
Sbjct: 1   MKKLLLILAIPIVVILVAILALTIFVNPNQFKPLIVEQAQKQTGLELVIEGDISWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K++ + +    +PL S ++ + ++ +D           
Sbjct: 61  IGFELGHTELRNPQGFSKPNLFKVDTVGVDISVMPLFSQQLEIGNVTLDGAEFYIETKKD 120

Query: 120 GVSNWFQ---------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
           G  N                                 ++ L  + V  G +++ D+++  
Sbjct: 121 GSKNIDALTKAQTQQAEQASDTAPTQNGETQPAGSDWSINLAGVTVSNGSLEMQDKQAGS 180

Query: 159 VYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------------ 202
              L D++L +S      +      +  +       A+G  +F  ++             
Sbjct: 181 YTKLYDISLNLSEFAFDNWTTADFGVKGEMNDQKFTAKGQADFKLEKGLANYALKNINFD 240

Query: 203 -----------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
                      +  I  +    +K  +L   +   A  + +D+ G    +  + I     
Sbjct: 241 ATYSDPANKIESATIGLDTFEFDKVNNLTYAMKGDAGGMKLDMQGAGQLSVDKAISKVQL 300

Query: 252 SVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
                 S      L  S  K  +  +         +S + L+ +  N+    D K  V+ 
Sbjct: 301 DKLTLKSTFEGDALPQSPMKVDMVSDLSFDLTKNHLS-FVLEKLTANA-IALDGKADVTL 358

Query: 310 DEENLLNFSENGAESMHDL------NETDFFEE--EEKKNKNDDLKKDDIQYSVNKKEEK 361
            +   + F+ +      D        +++  +     +        + D+        + 
Sbjct: 359 GDIPKVRFALHSPNIDLDEFLGLDQQDSEGNKPASGGESAPAGSEVEPDLSALKTLDVKG 418

Query: 362 DNSHDKENQEN 372
           D + DK    N
Sbjct: 419 DITIDKFKAAN 429


>gi|304392197|ref|ZP_07374139.1| putative AsmA [Ahrensia sp. R2A130]
 gi|303296426|gb|EFL90784.1| putative AsmA [Ahrensia sp. R2A130]
          Length = 1253

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 71/330 (21%), Positives = 131/330 (39%), Gaps = 24/330 (7%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI 83
           P F+DW  F++ FE +A+ ++G+ + V G  K  +LP PSV F ++ +    +G+   + 
Sbjct: 22  PPFVDWGQFKDRFEAEASRVIGQPVRVSGRTKAKLLPLPSVTFTEVSVG--PEGAPLLRA 79

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF---QRKSTMDMIHNVILE 140
               +  E  PLL G++R+ DM +D P L+  L+ +G   W               V +E
Sbjct: 80  STFHVNVELAPLLKGDVRIVDMAMDGPQLDIALNEEGRLVWPEGSDNPRVPLRAEEVAVE 139

Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200
            I +  G++++ D  S +V  L++++   SA           D++ G    EG    D  
Sbjct: 140 TITITNGQLRLSDSRSGRVIELAEVDAIASA-----------DTLIGPWRGEGKFTRDGI 188

Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL 260
           R+ F  ++        I+LK+ L P   P    L G   + ++ P + G+  V    +  
Sbjct: 189 RNRFSASSGQWKSAGRITLKLDLEPQDQPYDYALDGTFRFQKRVPAFDGIARVKRAGNPS 248

Query: 261 LNLELS--------AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312
               +S        A   +L  + +I+ G      +KL               +    + 
Sbjct: 249 DADRISFPRVDRATALPVQLEADVQIATGGATFPAFKLDIGSAIDPYTVTGTAQAVFAQR 308

Query: 313 NLLNFSENGAESMHDLNETDFFEEEEKKNK 342
                   G +      E    + E +  +
Sbjct: 309 LNYRVEAEGQQINLARLEAASPQSEGQSAQ 338


>gi|254470183|ref|ZP_05083587.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
 gi|211960494|gb|EEA95690.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
          Length = 1349

 Score =  170 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 77/331 (23%), Positives = 125/331 (37%), Gaps = 22/331 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +  V I +G    + LV A   PL IDW+ +R  FE     I+G ++ + G   + +LP 
Sbjct: 1   MNSVYITVGGTLILALVIALVGPLVIDWSAYRSLFESYGEKILGHQVTILGETDVQLLPA 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P V   D+R+   ED      I+G   R E   LL GE+ V +M +++P LN  L   G 
Sbjct: 61  PYVKLSDVRVGAVED--PLMTIKGFEGRIELPSLLRGEVHVTEMKLNEPELNLSLDEGGR 118

Query: 122 SNWFQRKSTMD-----MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
            +  Q  S           ++ILE + V+ G I + D  + +V    + NL++ A     
Sbjct: 119 LDVLQTNSRRSVISEIDPTSLILEDVSVRNGSIVLTDARTGEVRRAGNANLELYA----- 173

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
                   ++G   AEG   ++      KI +    +N  I +K Q+ P          G
Sbjct: 174 ------GGLQGPFKAEGAMLYEGVPYTLKIGSGRLERNGQIRVKTQVSPANVAAQFSTDG 227

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
            L        Y G   V    S+  +    A K      F +    + ++   L+    +
Sbjct: 228 FLRHQNGVVSYYGDAEVQSVTSEGSDDLEWAGK----SKFNLDGERLELTESTLRLGSED 283

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
                +     S   E          +   D
Sbjct: 284 RPITAEGGGVYSFGPEPEFQAVAQFKQVDLD 314


>gi|269967342|ref|ZP_06181403.1| AsmA protein [Vibrio alginolyticus 40B]
 gi|269828050|gb|EEZ82323.1| AsmA protein [Vibrio alginolyticus 40B]
          Length = 695

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 56/431 (12%), Positives = 132/431 (30%), Gaps = 62/431 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L+ L     V+LV    + +F++   F+     QA    G ++ ++G I     P 
Sbjct: 1   MKKLLLILAIPIVVILVAILALTIFVNPNQFKPLIVEQAQKQTGLELVIEGDISWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K++ + +    +PL S ++ + ++ +D           
Sbjct: 61  IGFELGHTELRNPQGFSKPNLFKVDTVGVDISVMPLFSQQLEIGNVTLDGAEFYIETKKD 120

Query: 120 GVSNWFQ---------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
           G  N                           T     ++ L  + V  G +++ D+++  
Sbjct: 121 GSKNIDALTKAQTQQAEQESNAAPTQNGETQTSGSDWSINLAGVTVSNGSLEMQDKQAGS 180

Query: 159 VYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------------ 202
              L D++L +S      +         +       A+G  +F  ++             
Sbjct: 181 YTKLYDISLNLSEFAFDNWTTADFGAKGEMNDQKFTAKGQADFKLEKGLANYALKNINFD 240

Query: 203 -----------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
                      +  I  +    +K  +L   +  +A  + +D+ G    +  + I     
Sbjct: 241 ATYSDPANKIESATIGLDTFEFDKVNNLTYAIKGVAGGMKLDMQGAGQLSVDKAISKVQL 300

Query: 252 SVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
                 S      L  S  K  +  +         +S + L+ +  N+    D K  V+ 
Sbjct: 301 DKLTLKSTFEGDALPQSPMKVDMVSDLSFDLTKNHLS-FVLEKLTANA-IALDGKADVTL 358

Query: 310 DEENLLNFSENGAESM------HDLNETDFFEE--EEKKNKNDDLKKDDIQYSVNKKEEK 361
            +   + F+ +            D    +  +     +        + D+        + 
Sbjct: 359 GDIPKVRFALHSPNIDLDEFLGLDKQAAEGNKPASGGESAPAGPEVEPDLSALKTLDVKG 418

Query: 362 DNSHDKENQEN 372
           D + DK    N
Sbjct: 419 DITIDKFKAAN 429


>gi|307944870|ref|ZP_07660207.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
 gi|307771794|gb|EFO31018.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
          Length = 1353

 Score =  169 bits (427), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 70/316 (22%), Positives = 125/316 (39%), Gaps = 22/316 (6%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED 76
           L+ A   P F+DWT +R  FER A  ++G  + V G   + +LP PS+ F D+R+   E+
Sbjct: 2   LMTALVGPYFVDWTLYRSTFERYAERVLGHPVTVLGEADMRLLPAPSITFSDVRVGAAEN 61

Query: 77  GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST-----M 131
                 +    M+ E  PL+ GE++V D+ +D+PHL   L   G  +W            
Sbjct: 62  --PLLVVSRFQMQVELPPLMKGEVKVRDLQLDRPHLQLSLDESGRLDWLTAMPETGVLAS 119

Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA 191
               +V  E + +  G + ++D  + + +     NL +SAR           S++G    
Sbjct: 120 LNADDVAFENVAITNGALSVVDARTGETFRFEGGNLSLSAR-----------SLEGPFKL 168

Query: 192 EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
           +GT   D +  +  +      +N +I LK Q+ P  +P+ + L G L      P + G F
Sbjct: 169 DGTIALDQEPYSISMATGRQQENGSIRLKGQVTPTRFPVDLGLDGLLSHENASPQFEGAF 228

Query: 252 SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE 311
           +++         E       LSG  +     + +  ++ +               +    
Sbjct: 229 NLSSIQ----APEDVDTAWTLSGQVEADMAELEVPEFEYRFGPQERQLSMTGTADLVYSG 284

Query: 312 ENLLNFSENGAESMHD 327
                      +   D
Sbjct: 285 ARRFEVRTRSKQIDLD 300


>gi|269962052|ref|ZP_06176406.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833136|gb|EEZ87241.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 695

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/431 (13%), Positives = 130/431 (30%), Gaps = 62/431 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L+ +      +L     + +F++   F+     QA    G ++ ++G I     P 
Sbjct: 1   MKKLLLIIAIPIVAILAVILGLVIFVNPNQFKPLIVEQAQKQTGLELVIEGDISWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +     PLLS ++ + ++ +D           
Sbjct: 61  IGFELGRTELRNPQGFSQPNLFKVETVGVDVSVTPLLSKQLEIGNVTLDGAEFYLETLKD 120

Query: 120 GVSNW---------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
           G  N                           +      + L  + +  G ++I D+++  
Sbjct: 121 GTKNIDALTKAQTQQAEQTTDAAPEQAADSQSAASDWTINLAGVSISNGYVEIQDKQAGS 180

Query: 159 VYFLSDLNLQISA----RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK--------- 205
              LSD++L +S      +      +  +  + +  A+G  +F   +             
Sbjct: 181 YTKLSDISLNLSQFAFDNWTTAGFGVKGEMNEQTFTAQGKADFKLAKGLASYALKNINFD 240

Query: 206 --------------ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
                         I       +K  +L   L   A  + +D+ G       + I     
Sbjct: 241 ATYSDATNKIESATIGLETFEFDKVNNLSYALKGEAGGMKLDMQGGGELTVDKAISKVQL 300

Query: 252 SVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
           +     S      L  S  K  ++ +         +S + L+ +  N+    D K  V+ 
Sbjct: 301 NKLTLNSTFEGDALPQSPMKVDMASDLSFDLTKSHLS-FVLEKLTANA-IALDGKADVTL 358

Query: 310 DEENLLNFSENGAESMHDL-----NETDF---FEEEEKKNKNDDLKKDDIQYSVNKKEEK 361
            +   + F+ +      D      N+            K       + D+        + 
Sbjct: 359 GDIPKVRFAVHSPNIDLDEFLGLNNQASGGDKPASSGSKAPAGPEVEPDLSALKTLDVKG 418

Query: 362 DNSHDKENQEN 372
           D + DK    N
Sbjct: 419 DITIDKFKAAN 429


>gi|91227379|ref|ZP_01261768.1| AsmA protein [Vibrio alginolyticus 12G01]
 gi|91188643|gb|EAS74933.1| AsmA protein [Vibrio alginolyticus 12G01]
          Length = 695

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 55/431 (12%), Positives = 131/431 (30%), Gaps = 62/431 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L+ L     V+LV    + +F++   F+     QA    G ++ ++G I     P 
Sbjct: 1   MKKLLLILAIPIVVILVAILALTIFVNPNQFKPLIVEQAQKQTGLELVIEGDISWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K++ + +    +PL S ++ + ++ +D           
Sbjct: 61  IGFELGHTELRNPQGFSKPNLFKVDTVGVDISVMPLFSQQLEIGNVTLDGAEFYIETKKD 120

Query: 120 GVSNWFQ---------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
           G  N                           T     ++ L  + V  G +++ D+++  
Sbjct: 121 GSKNIDALTKAQTQQAEQENNAAPTQNGETQTSGSDWSINLAGVTVSNGSLEMQDKQAGS 180

Query: 159 VYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------------ 202
              L D++L +S      +      +  +       A+G  +F  ++             
Sbjct: 181 YTKLYDISLNLSEFAFDNWTTADFGVKGEMNDQKFTAKGQADFKLEKGLANYALKNINFD 240

Query: 203 -----------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
                      +  I  +    +   +L   +   A  + +D+ G    +  + I     
Sbjct: 241 ATYSDPANKIESATIGLDTFEFDTVNNLTYAIKGDAGGMKLDMQGAGQLSVDKAISKVQL 300

Query: 252 SVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
                 S      L  S  K  +  +         +S + L+ +  N+    D K  V+ 
Sbjct: 301 DKLTLKSTFEGDALPQSPMKVDMVSDLSFDLTKNHLS-FVLEKLTANA-IALDGKADVTL 358

Query: 310 DEENLLNFSENGAESM------HDLNETDFFEE--EEKKNKNDDLKKDDIQYSVNKKEEK 361
            +   + F+ +            D    +  +     +        + D+        + 
Sbjct: 359 GDIPKVRFALHSPNIDLDEFLGLDKQAAEGNKPASGGESAPAGPEVEPDLSALKTLDVKG 418

Query: 362 DNSHDKENQEN 372
           D + DK    N
Sbjct: 419 DITIDKFKAAN 429


>gi|153835352|ref|ZP_01988019.1| AsmA protein [Vibrio harveyi HY01]
 gi|148868123|gb|EDL67285.1| AsmA protein [Vibrio harveyi HY01]
          Length = 695

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/431 (13%), Positives = 131/431 (30%), Gaps = 62/431 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L+ +      +L     + +F++   F+     QA    G ++ + G I     P 
Sbjct: 1   MKKLLLIIAIPIVAILAVILGLVIFVNPNQFKPLIVEQAQKQTGLELVIDGDISWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +     PL S ++ + ++ +D           
Sbjct: 61  IGFELGRTELRNPQGFSQPNLFKVETVGVDVSVTPLFSKQLEIGNVTLDGAEFYLETLKD 120

Query: 120 GVSNW---------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
           G  N                           +      + L  + +  G ++I D+++  
Sbjct: 121 GSKNIDALTKAQTQQAEKNTEATPEQAADSQSTASDWTINLAGVTISNGYVEIQDKQAGS 180

Query: 159 VYFLSDLNLQISAR----FLNIISPLSIDSIKGSVIAEGTGNFDNKRS------------ 202
              LSD++L +S      +      +  +    +  A+G  +F   +             
Sbjct: 181 YTKLSDISLNLSQFAFDSWTTADFGVKGEMNDQTFTAQGKADFKLAKGLTSYALKNINFD 240

Query: 203 -----------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
                      +  I       +KA +L   L   A  + +D+ G    N  + I     
Sbjct: 241 ATYRDPANKIESATIGLETFEFDKANNLSYALKGEAGGMKLDMQGGGKLNVDKAISKVQL 300

Query: 252 SVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
           +     S      L  S  K  ++ +         +S + L+ +  N+    D K  V+ 
Sbjct: 301 NKLTLNSTFEGDALPQSPMKVDMASDLSFDLTKSHLS-FVLEKLTANA-IALDGKADVTL 358

Query: 310 DEENLLNFSENGAESMHD----LNETDFFEE----EEKKNKNDDLKKDDIQYSVNKKEEK 361
            E   + F+ +      D    LN+     +               + D+        + 
Sbjct: 359 GEIPKVRFAVHSPNIDLDEFLGLNKQAQAGDQPASGGNSAPAGPEVEPDLSALKTLDVKG 418

Query: 362 DNSHDKENQEN 372
           D + DK    N
Sbjct: 419 DITIDKFKAAN 429


>gi|238897288|ref|YP_002922965.1| suppressor of ompF assembly mutants [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
 gi|229465043|gb|ACQ66817.1| suppressor of ompF assembly mutants [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
          Length = 609

 Score =  168 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 43/380 (11%), Positives = 115/380 (30%), Gaps = 34/380 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++++     +  ++  G   + + ++  DFR    +Q     G ++A++G ++ H+ P 
Sbjct: 1   MKKLMTVFIIVLVLLAGGMTALVVLLNPNDFRGYLAQQIEKRSGYQLALEGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            SV    + +            + + +  E  PLLS +++V  + +    +N        
Sbjct: 61  LSVIAGQMSLTAPGAKKSIISAQNMRLDVELWPLLSHQLKVKQVSLKGARINLI------ 114

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                +  T   +  V  E++             S+    +  + L  S           
Sbjct: 115 --PESQPKTPKNLPTVSKEEVDSDHAS------TSNWKLGIDKVQLMDSLLIWQKEDEAQ 166

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
           I+    ++           + +     N   ++  +SLK  +    YP   D        
Sbjct: 167 INVRNVNLDL-VQNENKQVKISLLSQINRDQRDLTVSLKAAVDLHQYPQKWDADIQ---- 221

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
                    + + G    +  ++ +     L   +      +  ++    +    ++   
Sbjct: 222 ------QLSYQLQGADLPVNGIKGTM---TLQAQYDKPSEKLTFNQLNFSA----NNNHF 268

Query: 302 DNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359
               +                    D  L  T   ++  K      +       +     
Sbjct: 269 IGNAEAILSSIPTYLIRLRAQNINLDEILGWTPLKKDNTKNQSTSAVTVPTPVIATTTDN 328

Query: 360 EKDNSHDKENQENFSGDKMI 379
            +D S + +   +F+ D ++
Sbjct: 329 NEDLSQNLQVLRDFNTDFLL 348


>gi|328474601|gb|EGF45406.1| AsmA protein [Vibrio parahaemolyticus 10329]
          Length = 695

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/431 (13%), Positives = 130/431 (30%), Gaps = 62/431 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L+ L     V +     + +F++   F+     QA    G ++ ++G I     P 
Sbjct: 1   MKKLLLVLAIPVVVFVAAILALTIFVNPNQFKPLIVEQAQKQTGLELVIEGDISWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K++ + +     PL S ++ + ++ +D           
Sbjct: 61  IGFELGRTELRNPQGFSQPNLFKVDTVGVDVSVTPLFSKQLEIGNITLDGAEFYVETKKD 120

Query: 120 GVSNWFQ---------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
           G  N                           +     ++ L  + V  G ++I D+++  
Sbjct: 121 GSKNIDAFTKAQTQQAEQPKDTAPEPSGESQSAGSDWSINLAGVTVSNGSLEIQDKQAGN 180

Query: 159 VYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------------ 202
              L D++L +S     R+      +  +       AEG  +F   +             
Sbjct: 181 YTKLYDVSLNLSEFAFDRWTTADFGMKGEMNDQKFTAEGKADFKLAKGLASYALKNINVD 240

Query: 203 -----------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
                      + KI  +    +K  +L   L   A  + +D+ G       Q I   + 
Sbjct: 241 ATYTDPNNTIESAKIGLDTFEFDKVNNLSYALKGSAAGMKLDMQGGGQLTVDQAISKVLL 300

Query: 252 SVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
           +     S      L  S  K  +  +         +S + L+ +  N+    D K  V+ 
Sbjct: 301 NKLTLKSSFEGDALPQSPMKVDMVSDLSFDLNKSHLS-FILEKLTANA-IALDGKADVTL 358

Query: 310 DEENLLNFSENGAESMHDLN--------ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361
            +   + F  +      D           ++      K        + D+        + 
Sbjct: 359 GDIPKIRFDLHSPNIDLDEFLGLDKQAPASEKPASGGKSASAGPEVEPDLSALKTLDVKG 418

Query: 362 DNSHDKENQEN 372
           D + DK    N
Sbjct: 419 DITIDKFKAAN 429


>gi|156975196|ref|YP_001446103.1| hypothetical protein VIBHAR_02923 [Vibrio harveyi ATCC BAA-1116]
 gi|156526790|gb|ABU71876.1| hypothetical protein VIBHAR_02923 [Vibrio harveyi ATCC BAA-1116]
          Length = 695

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/431 (13%), Positives = 129/431 (29%), Gaps = 62/431 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L+ +      +L     + +F++   F+     QA    G ++ + G I     P 
Sbjct: 1   MKKLLLIIAIPIVAILAVILGLVIFVNPNQFKPLIVEQAQKQTGLELVIDGDISWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +     PL S ++ + ++ +D           
Sbjct: 61  IGFELGRTELRNPQGFSQPNLFKVETVGVDVSVTPLFSKQLEIGNVTLDGAEFYLETLKD 120

Query: 120 GVSNW---------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
           G  N                           +      + L  + +  G ++I D+++  
Sbjct: 121 GTKNIDALTKAQTQQAEKNTEATPEQAADSQSTASDWTINLAGVTISNGYVEIQDKQAGS 180

Query: 159 VYFLSDLNLQISA----RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK--------- 205
              LSD++L +S      +      +  +    +  A+G  +F   +             
Sbjct: 181 DTKLSDISLNLSQFAFDNWATADFGVKGEMNDQTFTAQGKADFKLAKGLASYALKNINFD 240

Query: 206 --------------ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
                         I       +KA +L   L   A  + +D+ G    N  + I     
Sbjct: 241 ATYRDPANKIESATIGLETFEFDKANNLSYALKGEAGGMKLDMQGGGELNVDKAISKVQL 300

Query: 252 SVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
           +     S      L  S  K  ++ +         +S + L+ +  N+    D K  V+ 
Sbjct: 301 NKLTLNSTFEGDALPQSPMKVDMASDLSFDLTKSHLS-FVLEKLTANA-IALDGKADVTL 358

Query: 310 DEENLLNFSENGAESMHD----LNETDFFEE----EEKKNKNDDLKKDDIQYSVNKKEEK 361
            E   + F+ +      D    LN+          +          + D+        + 
Sbjct: 359 GEIPKVRFAVHSPNIDLDEFLGLNQQASAGGKSASDGNSAPAGPEVEPDLSALKTLDVKG 418

Query: 362 DNSHDKENQEN 372
           D   DK    N
Sbjct: 419 DIKIDKFKAAN 429


>gi|163802871|ref|ZP_02196760.1| uridine kinase [Vibrio sp. AND4]
 gi|159173411|gb|EDP58234.1| uridine kinase [Vibrio sp. AND4]
          Length = 697

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 58/429 (13%), Positives = 131/429 (30%), Gaps = 56/429 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L+ +      +L     + +F++   F+     QA    G ++ + G I     P 
Sbjct: 1   MKKLLLIIAIPIVAILAVILGLVIFVNPNQFKPLIVEQAQKQTGLELVIDGDISWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +     PLLS ++ + ++ +D           
Sbjct: 61  IGFELGRTELRNPQGFSQPNLFKVETVGVDVSVAPLLSKQLEIGNVTLDGAEFYLETLKD 120

Query: 120 GVSNW---------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
           G  N                           +      + L  + +  G ++I D+++  
Sbjct: 121 GTKNIDALTKAQTQQAEKTTEATPERAADSKSAASDWTINLAGVTISNGYVEIQDKQASS 180

Query: 159 VYFLSDLNLQISAR----FLNIISPLSIDSIKGSVIAEGTGNFDNKRS------------ 202
              LSD++L +S      +      +  +    +  A+G  +F   +             
Sbjct: 181 YTKLSDISLNLSQFAFDSWTTADFGMKGEMNDQTFTAQGKADFKLAKGLTSYALKNVNFD 240

Query: 203 -----------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
                      +  I       +K  +L   L   A  + +D+ G    N  + I     
Sbjct: 241 ATYRDPANKIESATIGLETFEFDKVNNLSYALKGDAGGMKLDMQGGGELNVDKAISKVQL 300

Query: 252 SVAGDFSKL--LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
           +     S      L  S  K  ++ +         +S + L+ +  N+    D K  V+ 
Sbjct: 301 NKLTLNSTFEGEALPQSPMKVDMASDLSFDLTKSHLS-FVLEKLTANA-IALDGKADVTL 358

Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD-DIQYSVNKKEEKDNSHDKE 368
            E   + F+ +      D       ++    N N  +    +       + +       +
Sbjct: 359 GEIPKVRFAVHSPNIDLDEF-LGLNQQAPAGNGNKPVSGGKNESVGQEVEPDLSVLKTLD 417

Query: 369 NQENFSGDK 377
            Q +   DK
Sbjct: 418 LQGDIGIDK 426


>gi|300021794|ref|YP_003754405.1| AsmA family protein [Hyphomicrobium denitrificans ATCC 51888]
 gi|299523615|gb|ADJ22084.1| AsmA family protein [Hyphomicrobium denitrificans ATCC 51888]
          Length = 1335

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 63/376 (16%), Positives = 121/376 (32%), Gaps = 24/376 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +   L+    L  +VL   F VP F+DW  +R  FE +A+ ++G+ + V G + +  LP 
Sbjct: 1   MNNGLLFFAGLLVLVLSALFAVPSFVDWNGYRGVFEEEASKVLGRDVRVGGAVNLRFLPA 60

Query: 62  PSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           P V F  +RI       G    + +   M      LL G +   ++ + +P L       
Sbjct: 61  PYVQFDKVRIANVTGQTGEPFVRADSFKMWLSASALLRGVLEASEIELSKPVLTLVADKA 120

Query: 120 GVSNWFQ----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
           G  NW            +   + L+ + +  G + + +  +++V  + D+N         
Sbjct: 121 GGGNWSNITLRSADLPFVPRELALKSVRLSEGTVSLYNATAERVAHVEDIN--------- 171

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
               LS + + G    +G  ++             PA++ +I LKI       P +  L 
Sbjct: 172 --GELSAEGLTGPFRFKGNASWLGAAHGVAFATEAPARDGSIGLKISARSTGSPDVYLLN 229

Query: 236 GNLFWNEKQPIYSGVFS------VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
           G++      P + G ++      V    ++    +  A    L           +     
Sbjct: 230 GHVSDLANNPSFKGEWTGTVTMPVYEASARADASKDDATLLDLKAEVSGDLSAAQFDNIT 289

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349
           L                 +      L+          D       +      K  +L   
Sbjct: 290 LSLNAGAEPQMITGSAVATWASPARLDLKLASKWLDIDRL-AGAGQGSASFAKLKELGIG 348

Query: 350 DIQYSVNKKEEKDNSH 365
            +Q            +
Sbjct: 349 LMQSVAGDSTASTKIN 364


>gi|260903214|ref|ZP_05911609.1| AsmA family protein [Vibrio parahaemolyticus AQ4037]
 gi|308106553|gb|EFO44093.1| AsmA family protein [Vibrio parahaemolyticus AQ4037]
          Length = 608

 Score =  165 bits (418), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 59/431 (13%), Positives = 130/431 (30%), Gaps = 62/431 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L+ L     V +     + +F++   F+     QA    G ++ ++G I     P 
Sbjct: 1   MKKLLLVLAIPVVVFVAAILALTIFVNPNQFKPLIVEQAQKQTGLELVIEGDISWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K++ + +     PL S ++ + ++ +D           
Sbjct: 61  IGFELGRTELRNPQGFSQPNLFKVDTVGVDVSVTPLFSKQLEIGNITLDGAEFYVETKKD 120

Query: 120 GVSNWFQ---------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
           G  N                           +     ++ L  + V  G ++I D+++  
Sbjct: 121 GSKNIDALTKAQTQQAEQPNDTAPDQSGESQSAGSDWSINLAGVTVSNGSLEIQDKQAGN 180

Query: 159 VYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------------ 202
              L D++L +S      +      +  +       AEG  +F   +             
Sbjct: 181 YTKLYDVSLNLSEFAFDSWTTADFGMKGEMNDQKFTAEGKADFKLAKGLASYALKNINVD 240

Query: 203 -----------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
                      + KI  +    +K  +L   L   A  + +D+ G       Q I   + 
Sbjct: 241 ATYTDPNNTIESAKIGLDTFEFDKVNNLSYALQGSAAGMKLDMQGGGQLTVDQAISKVLL 300

Query: 252 SVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
           +     S      L  S  K  +  +         +S + L+ +  N+    D K  V+ 
Sbjct: 301 NKLTLKSSFEGDALPQSPMKVDMVSDLSFDLNKSHLS-FILEKLTANA-IALDGKADVTL 358

Query: 310 DEENLLNFSENGAESMHDLN--------ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361
            +   + F+ +      D           ++      K        + D+        + 
Sbjct: 359 GDIPKIRFALHSPNIDLDEFLGLDKQAPASEKPASGGKSASAGPEVEPDLSALKALDVKG 418

Query: 362 DNSHDKENQEN 372
           D + DK    N
Sbjct: 419 DITIDKFKAAN 429


>gi|323498219|ref|ZP_08103221.1| AsmA protein [Vibrio sinaloensis DSM 21326]
 gi|323316647|gb|EGA69656.1| AsmA protein [Vibrio sinaloensis DSM 21326]
          Length = 706

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/424 (15%), Positives = 134/424 (31%), Gaps = 65/424 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ + +      +L     + L ++   F+     QA L  G  +A++G I     P 
Sbjct: 1   MKKLFLFVAIPIVAILGAILALVLLVNPNQFKPMIVEQAKLQTGLDLAIEGDIGWKFFPS 60

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   E  S     K++   +     PL S ++ + ++ +D   ++      
Sbjct: 61  IGFELGQTELRNPEGFSQLNMLKVDSAMIEVSVTPLFSKQLEIGNIVLDGAQVSIETLKD 120

Query: 120 GVSNWFQR---------------------------KSTMDMIHNVILEKIHVKGGRIKII 152
           G  N                                S+      + L  + +    + + 
Sbjct: 121 GRKNIDALTKAQSAQAEQPQAQQETAPANSEPKADDSSPAAEWTIHLAGVSISNAAVDVQ 180

Query: 153 DQESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------ 202
           D ++     L D+NL +S     R+++       +  +     +G   F+  +       
Sbjct: 181 DLQAGSFTKLYDVNLSLSEFEFNRWVSADFGAKGELNQQKFATQGHAEFNLAKGFAEFAL 240

Query: 203 -----------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
                            + K++ +    +KA  L   L   A  + ID+ G+      + 
Sbjct: 241 RNIELDSSFSDPSTQMDSIKLSLDTFEFDKANQLSYALKGKAAELAIDMKGSASLTVDKV 300

Query: 246 IYSGVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
           I     S     + L    L  S  K  ++ +         +S + LQS+  N+    D 
Sbjct: 301 ISKLEMSALTLDANLEGDSLPQSPMKVDMASDLTFDLTKSHLS-FVLQSLTANA-LAFDG 358

Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ---YSVNKKEE 360
           K  ++  +   + FS +      D  E    ++   K    D           SV K+ E
Sbjct: 359 KADITLADIPKVRFSLHSPNIDLD--EFLGLKQASAKPAESDQTAPQESSKPASVEKEVE 416

Query: 361 KDNS 364
            D S
Sbjct: 417 PDLS 420


>gi|28898840|ref|NP_798445.1| AsmA protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839835|ref|ZP_01992502.1| AsmA protein [Vibrio parahaemolyticus AQ3810]
 gi|260364841|ref|ZP_05777419.1| AsmA family protein [Vibrio parahaemolyticus K5030]
 gi|260879486|ref|ZP_05891841.1| AsmA protein [Vibrio parahaemolyticus AN-5034]
 gi|260898215|ref|ZP_05906711.1| AsmA protein [Vibrio parahaemolyticus Peru-466]
 gi|28807059|dbj|BAC60329.1| AsmA protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746642|gb|EDM57630.1| AsmA protein [Vibrio parahaemolyticus AQ3810]
 gi|308088393|gb|EFO38088.1| AsmA protein [Vibrio parahaemolyticus Peru-466]
 gi|308093507|gb|EFO43202.1| AsmA protein [Vibrio parahaemolyticus AN-5034]
 gi|308113952|gb|EFO51492.1| AsmA family protein [Vibrio parahaemolyticus K5030]
          Length = 695

 Score =  165 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/431 (13%), Positives = 130/431 (30%), Gaps = 62/431 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L+ L     V +     + +F++   F+     QA    G ++ ++G I     P 
Sbjct: 1   MKKLLLVLAIPVVVFVAAILALTIFVNPNQFKPLIVEQAQKQTGLELVIEGDISWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K++ + +     PL S ++ + ++ +D           
Sbjct: 61  IGFELGRTELRNPQGFSQPNLFKVDTVGVDVSVTPLFSKQLEIGNITLDGAEFYVETKKD 120

Query: 120 GVSNWFQ---------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
           G  N                           +     ++ L  + V  G ++I D+++  
Sbjct: 121 GSKNIDALTKAQTQQAEQPNDTAPDQSGESQSAGSDWSINLAGVTVSNGSLEIQDKQAGN 180

Query: 159 VYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------------ 202
              L D++L +S      +      +  +       AEG  +F   +             
Sbjct: 181 YTKLYDVSLNLSEFAFDSWTTADFGMKGEMNDQKFTAEGKADFKLAKGLASYALKNINVD 240

Query: 203 -----------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
                      + KI  +    +K  +L   L   A  + +D+ G       Q I   + 
Sbjct: 241 ATYTDPNNTIESAKIGLDTFEFDKVNNLSYALQGSAAGMKLDMQGGGQLTVDQAISKVLL 300

Query: 252 SVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
           +     S      L  S  K  +  +         +S + L+ +  N+    D K  V+ 
Sbjct: 301 NKLTLKSSFEGDALPQSPMKVDMVSDLSFDLNKSHLS-FILEKLTANA-IALDGKADVTL 358

Query: 310 DEENLLNFSENGAESMHDLN--------ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361
            +   + F+ +      D           ++      K        + D+        + 
Sbjct: 359 GDIPKIRFALHSPNIDLDEFLGLDKQAPASEKPASGGKSASAGPEVEPDLSALKALDVKG 418

Query: 362 DNSHDKENQEN 372
           D + DK    N
Sbjct: 419 DITIDKFKAAN 429


>gi|85058953|ref|YP_454655.1| putative assembly protein [Sodalis glossinidius str. 'morsitans']
 gi|84779473|dbj|BAE74250.1| outer membrane assembly protein [Sodalis glossinidius str.
           'morsitans']
          Length = 601

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 59/389 (15%), Positives = 117/389 (30%), Gaps = 52/389 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+L  L  L  VV+ G   +   I+  DFR     Q     G  +A++G ++ H  P 
Sbjct: 1   MRRLLTTLFILLVVVVAGLTAMVALINPNDFRSYMIMQVEQRSGYHLALEGDLRWHAWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    ++I            E + +     PLLS ++ V  + +    +     S   
Sbjct: 61  LSILAGRMKITAPGATVPLVSAENMRLDVALWPLLSHQLLVKQVMLKGAVITLTPDSAAR 120

Query: 122 S-------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                        +       +  +  + V    + I  +++++   L DLNLQ+     
Sbjct: 121 RPENAPIAPVGTPEPVEGNGWSWNIGSLQVAD-SLLIWQRDANEQLNLRDLNLQMKQDDA 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
              S                         F    N   ++ A+SL   L    YP  +  
Sbjct: 180 RKAS-----------------------IEFSGRLNHDQRDLAVSLNGSLDLSQYPRQVSA 216

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
           + +             + +         +E        + ++   +  + +      +  
Sbjct: 217 YMD----------KFNYRLRASGLLEQGIEGGG---AFNADYSAVNQTLTLGGLTFSA-- 261

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKKDD 350
             + ++   +      E+ +            D    L       E   +N+N    +  
Sbjct: 262 --NDSELSGQISARLGEQPVYQLDLAAKTLNLDTLLGLQPLTDDNEARAQNQNAGSGRPV 319

Query: 351 IQYSVNKKEEKDNSHDKENQENFSGDKMI 379
           I  S        N +D   Q N S   +I
Sbjct: 320 IANSALTDNALSNLNDFNGQLNLSAQNVI 348


>gi|320156801|ref|YP_004189180.1| AsmA protein [Vibrio vulnificus MO6-24/O]
 gi|319932113|gb|ADV86977.1| AsmA protein [Vibrio vulnificus MO6-24/O]
          Length = 702

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 56/419 (13%), Positives = 126/419 (30%), Gaps = 59/419 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ + L    +VV++ A  +   ++   F+     Q     G ++ ++G I+    P 
Sbjct: 1   MKKLFLILAAPIAVVVMAAIALVTLVNPNQFKPLITEQVAKQTGLELVIEGDIEWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL   +++ D+ +D    +      
Sbjct: 61  IGFSLGKTELKNPQGFSQENLFKVENVGIDISVMPLLDKVLQIGDVRLDGAEFHLETRKD 120

Query: 120 GVSNW-------------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQ 154
           G  N                            +++       + L  I V   ++   D+
Sbjct: 121 GQKNIDALTQQQKAQQETAQQEVRSEPTTDAPQQAGAAAEWRIELAGISVSNAKLVNQDR 180

Query: 155 ESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKR--------- 201
           ++     L D+N  +S     ++          + +    A G   F   +         
Sbjct: 181 QAGTSLELYDVNFSLSEFAFEQWTKAEFSAKGKNNQQQFSANGKLEFQLAQDFSSYALRN 240

Query: 202 --------------SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
                            K+  +    +K  +L  ++   A  + +   G+   +    I 
Sbjct: 241 IELNSQFSDPATKMDNIKLVLDTFEFDKDNALTFEIKGQASGMDLSANGSAQLHVDAAIS 300

Query: 248 SGVFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
           + +             +L  S  K  +S           +S   L  +  N+    D K 
Sbjct: 301 TVMVKAFQLESQLNGESLPQSPMKVAMSSEVTFDVPRSHLS-LVLNKLTANA-IALDGKA 358

Query: 306 KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364
            V+  E   + FS +  E   D       +  ++    +     D     N + E D S
Sbjct: 359 DVTLAEIPQVRFSLHSPEIDLDEF-LGLTQPSQETASTNSSNDKDAHPEANNEVEPDLS 416


>gi|326424120|ref|NP_761822.2| AsmA protein [Vibrio vulnificus CMCP6]
 gi|319999502|gb|AAO11349.2| AsmA protein [Vibrio vulnificus CMCP6]
          Length = 702

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 56/419 (13%), Positives = 126/419 (30%), Gaps = 59/419 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ + L    +VV++ A  +   ++   F+     Q     G ++ ++G I+    P 
Sbjct: 1   MKKLFLILAAPIAVVVMAAIALVTLVNPNQFKPLITEQVAKQTGLELVIEGDIEWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL   +++ D+ +D    +      
Sbjct: 61  IGFSLGKTELKNPQGFSQENLFKVESVGIDISVMPLLDKVLQIGDVRLDGAEFHLETRKD 120

Query: 120 GVSNW-------------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQ 154
           G  N                            +++       + L  I V   ++   D+
Sbjct: 121 GQKNIDALTQQQKVQQETAQQEVSSEPTTDAPQQAGAAADWRMELAGITVSNAKLVNQDR 180

Query: 155 ESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKR--------- 201
           ++     L D+N  +S     ++          + +    A G   F   +         
Sbjct: 181 QAGTSLELYDVNFSLSEFAFKQWTKAEFSAKGKNNQQQFSANGKLEFQLAQDFSSYALRN 240

Query: 202 --------------SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
                            K+  +    +K  +L  ++   A  + +   G+   +    I 
Sbjct: 241 IELNSQFSDPATKMDNIKLVLDTFEFDKDNALTFEIKGQASGMDLSANGSAQLHVDAAIS 300

Query: 248 SGVFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
           + +             +L  S  K  +S           +S   L  +  N+    D K 
Sbjct: 301 TVMVKAFQLESQLNGESLPQSPMKVAMSSEVTFDVPRSHLS-LVLNKLTANA-IALDGKA 358

Query: 306 KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364
            V+  E   + FS +  E   D       +  ++    +     D     N + E D S
Sbjct: 359 DVTLAEIPKVRFSLHSPEIDLDEF-LGLTQPSQETASTNSSNDKDAHPEANNEVEPDLS 416


>gi|261253530|ref|ZP_05946103.1| AsmA protein [Vibrio orientalis CIP 102891]
 gi|260936921|gb|EEX92910.1| AsmA protein [Vibrio orientalis CIP 102891]
          Length = 715

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 52/422 (12%), Positives = 127/422 (30%), Gaps = 61/422 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ + +      +L     + + ++   F+     QA    G  + ++G I     P 
Sbjct: 1   MKKLFLFIAIPIVAILGAVIALVVLVNPNQFKPLIVEQAKTHTGLDLVIEGDISWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K++ + +    +PL S ++ + ++ +D    +      
Sbjct: 61  IGFELGQTELRNPQGFEQLNMFKVDTVGIDVSVMPLFSQQLEIGNITLDGAAFSLETLKD 120

Query: 120 GVSNWFQR----------------------------KSTMDMIHNVILEKIHVKGGRIKI 151
           G  N                                + +      + L  + V    ++I
Sbjct: 121 GSKNIDALTQAQTAAAESAPVDAESTSAAQTQTESTQQSAAPAWTINLAGVTVSNASVEI 180

Query: 152 IDQESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS----- 202
            D+++     L D++L +S      +  +      ++ +    A+G   F   +      
Sbjct: 181 QDKQAGSFTKLYDVSLNLSEFAVDTWTKVDFAAKGEANQQKFSAQGDAEFKLAKGFKEYA 240

Query: 203 ------------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
                             + KI       +KA +L   +   A  + ID+ G    N  +
Sbjct: 241 LRNINLDASFSDAATQIESAKIGLETFEFDKANALTYAVVGKAAGLDIDMKGAASLNVDK 300

Query: 245 PIYSGVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
            I   + +     +      L  S  K  ++ +         +S + L+ +  N+    D
Sbjct: 301 AITKVMMNQLTLDATFEGDSLPQSPMKVDMASDLSFDLTKNHLS-FVLEKLTANA-LAFD 358

Query: 303 NKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKD 362
            K  ++  +   + FS +      D        +E K ++ +         S   K    
Sbjct: 359 GKADITLADIPKVRFSLHSPNIDLDEFLGLGQTQESKASETNSETAPANSESKTAKTSPK 418

Query: 363 NS 364
             
Sbjct: 419 KP 420


>gi|307130144|ref|YP_003882160.1| putative assembly protein [Dickeya dadantii 3937]
 gi|306527673|gb|ADM97603.1| predicted assembly protein [Dickeya dadantii 3937]
          Length = 604

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 47/333 (14%), Positives = 104/333 (31%), Gaps = 48/333 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+   L  L  V+  G   + + I+  DFR    RQ     G ++ + G ++ H+ P 
Sbjct: 1   MRRLFTTLVILLVVLAAGMTALVVLINPNDFRAYMVRQVETRTGYRLNLDGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+   ++ +      +     E + +  +  PLLS ++ V  + +    +     S+  
Sbjct: 61  LSILSGNLSVSAPGAATPVISAENMRLDVKLWPLLSHQLEVKQVMLKGAVIRLTSDSEAR 120

Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                            +      + ++ V    +    + +  V  + D+NL + +   
Sbjct: 121 VAGPVPIAPGGTSSPEPETPWRFDINRVEVADSLLVF-QRGNAPVLNVRDINLTMESDSA 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                     R +     N   ++ + SL   L    YP  I  
Sbjct: 180 R-----------------------QVRVSLSSRFNRDQRDLSFSLNAMLDMQNYPQQIGA 216

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                      + S  + + G       +     K  L G+++     + IS++ L +  
Sbjct: 217 D----------VGSVSYQLQGAGLPTEGIS---GKGTLRGSYQRQPEKLTISQFALSA-- 261

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
             +S+  +     +              +   D
Sbjct: 262 --NSSQLNGSLSTTFGVTPEYVLDLQSEKLDLD 292


>gi|37679446|ref|NP_934055.1| putative AsmA protein [Vibrio vulnificus YJ016]
 gi|37198190|dbj|BAC94026.1| putative AsmA protein [Vibrio vulnificus YJ016]
          Length = 718

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 56/419 (13%), Positives = 125/419 (29%), Gaps = 59/419 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ + L    +VV++ A  +   ++   F+     Q     G ++ ++G I+    P 
Sbjct: 17  MKKLFLILAAPIAVVVMAAIALVTLVNPNQFKPLITEQVAKQTGLELVIEGDIEWQFFPS 76

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL   +++ D+ +D           
Sbjct: 77  IGFSLGKTELKNPQGFSQENLFKVENVGIDISVMPLLDKVLQIGDVRLDGAEFYLETRKD 136

Query: 120 GVSNW-------------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQ 154
           G  N                            ++        + L  I V   ++   D+
Sbjct: 137 GQKNIDALTQQQKAQQETAQQEVSSEPTTDAPQQPGAAADWRMELAGITVSNAKLVNQDR 196

Query: 155 ESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKR--------- 201
           ++     L D+N  +S     ++          + +    A G   F   +         
Sbjct: 197 QAGTSLELYDVNFSLSEFAFDQWTKAEFSAKGKNNQQQFSANGKLEFQLAQDFSSYALRN 256

Query: 202 --------------SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
                            K+  +    +K  +L  ++   A  + +   G+   +    I 
Sbjct: 257 IELNSQFSDPATKMDNIKLVLDTFEFDKDNALTFEIKGQASGMDLSANGSAQLHVDAAIS 316

Query: 248 SGVFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
           + +             +L  S  K  +S        +  +S   L  +  N+    D K 
Sbjct: 317 TVMVKAFQLESQLNGKSLPQSPMKVAMSSEVTFDVPSSHLS-LVLNKLTANA-IALDGKA 374

Query: 306 KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364
            V+  E   + FS +  E   D       +  ++    +     D     N + E D S
Sbjct: 375 DVTLAEIPKVRFSLHSPEIDLDEF-LGLTQPSQETASTNSSNDKDAHPEANNEVEPDLS 432


>gi|315122504|ref|YP_004062993.1| hypothetical protein CKC_03780 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495906|gb|ADR52505.1| hypothetical protein CKC_03780 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 336

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 153/295 (51%), Positives = 208/295 (70%), Gaps = 11/295 (3%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70
           FL SV+L+GAF++P FI WTDF+E  ERQA+L +GKKI V+G I++ ILPFP++ F+DI 
Sbjct: 27  FLLSVLLLGAFSIPFFISWTDFQEKIERQASLFIGKKIVVRG-IEVSILPFPAIVFRDIG 85

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK----------G 120
           IDQ+++GSFES+I+ +S+   F PLL GEIRV DM+ID+P++ FYL              
Sbjct: 86  IDQRDNGSFESRIKKISINVHFFPLLFGEIRVCDMHIDRPYVTFYLPKNKGMFNVSKESN 145

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             N     S M MIHN++LEK H+  GRI+IIDQESD+ YF+S LNL+ISA  L+I SPL
Sbjct: 146 KVNSSHENSIMAMIHNIVLEKSHIDEGRIQIIDQESDKSYFISGLNLEISANILDISSPL 205

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
           SI+SIKG +  EG G +++ +S+FKI A  PA+N +  LK+Q+  L Y I+ D  GN FW
Sbjct: 206 SINSIKGFIGVEGRGKYEDNKSSFKIMATLPAQNNSFPLKVQIASLDYSIVFDFNGNFFW 265

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
           ++K PIY+GVFS  G  SKLL L++  + S++SG+F  SD ++RI  YKLQS   
Sbjct: 266 DQKNPIYTGVFSAYGHISKLLPLKIPIEWSKVSGDFDFSDWHMRIEHYKLQSGSL 320


>gi|74318272|ref|YP_316012.1| hypothetical protein Tbd_2254 [Thiobacillus denitrificans ATCC
           25259]
 gi|74057767|gb|AAZ98207.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 632

 Score =  160 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 49/338 (14%), Positives = 108/338 (31%), Gaps = 27/338 (7%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M RR L      F+VV+     +    +W   R+  ER      G+++ + G +K+ +  
Sbjct: 1   MARRALKWFAISFAVVVAAVLILFALPNWNALRDPIERLVAEKTGRELRIGGDLKVRLAW 60

Query: 61  FPSVFFK--DIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
            P++     D+               I  ++   E +PLL G++   D+ +D+  ++   
Sbjct: 61  PPAIRIGAADVSFANPSWAAQKNMLDIGQVAFHVELVPLLGGDLVFADVRLDRAEVDLEK 120

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
           S+ G  NW   +   D    V+++ + V  GR+   D  ++         ++  A     
Sbjct: 121 SADGRKNWLLDREQRDEEARVVVKHVSVSDGRVAYSDPAAETSLRARVATVRPDAGET-- 178

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP--AKNKAISLKIQLFPLAYPIIIDL 234
                     G +  +  G +  +    + +       + +    ++ +           
Sbjct: 179 ---------TGGLRFDVEGRYKGEPIVARGSGESVLGLREQQEPYRLAVAGRVGQTRASA 229

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYK 289
            G +    K         VAG     L   +     R      +G         R   ++
Sbjct: 230 AGRITNLLKPSAVDLQIKVAGASLGHLYPLIGTVFPRTPPYETAGRLIHRGSLWRYENFR 289

Query: 290 LQSILPNSSTDEDNKTKVSQ-DEENLLNFSENGAESMH 326
            +    +         +V +  E  +L  +    +   
Sbjct: 290 GRVGKSD----VAGTLQVDRAGERPVLAATLRSDKLDL 323


>gi|319786360|ref|YP_004145835.1| AsmA family protein [Pseudoxanthomonas suwonensis 11-1]
 gi|317464872|gb|ADV26604.1| AsmA family protein [Pseudoxanthomonas suwonensis 11-1]
          Length = 667

 Score =  160 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 105/332 (31%), Gaps = 29/332 (8%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68
           LG+  + + +    + LF DW  F+   ER      G++  + G + + +    +V    
Sbjct: 34  LGWTLAALGIAILLLVLFFDWNWFKGPLERAVGSATGREFRIGGDLDVDLGRTITVSADQ 93

Query: 69  IRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV-SNWF 125
           + +   E          E + +     PLL+  +R+ ++   +  +    +  G   NW 
Sbjct: 94  LTLSNAEWSKEPRMGAAERVEIDIAAWPLLALRLRMKEIRAVRTDIWLETNPDGEGGNWE 153

Query: 126 QRKST--MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                   D      LE++ +  GR++  +         +D++L +++      S     
Sbjct: 154 FGDDHSDPDEDPRWRLERLWIDDGRLRFTNASER-----TDIDLALASIEGGDRST---- 204

Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                V  +G G++       +  A  P +  +     +I L   A        G L   
Sbjct: 205 ---APVAVKGNGHWRGAAFRMEGQAASPLELADTDTPYRIDLDARAGRTRASATGTLTNP 261

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPN 296
            +   +     +AG   + L   L           L G  + +    R   +K      +
Sbjct: 262 FRFQTFDLQMKLAGADLEELYPLLGLALPASPPYALDGRLRRNGDVWRYEGFKGTVGDSD 321

Query: 297 SSTDEDNKTKVS-QDEENLLNFSENGAESMHD 327
                    KV    E  L        +   D
Sbjct: 322 ----LSGDVKVDVSGERPLFVAQLLSRKLDLD 349


>gi|218459405|ref|ZP_03499496.1| hypothetical protein RetlK5_07897 [Rhizobium etli Kim 5]
          Length = 372

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 114/253 (45%), Gaps = 12/253 (4%)

Query: 75  EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134
            DG+   ++E  SM AE  P LSGE  +FDM +  P +   L   G  +W +        
Sbjct: 1   ADGTPIVRVEQFSMDAELAPFLSGEALIFDMRVVNPKVRLRLLKDGTLDWMRGSRAEIPA 60

Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
             V+LE +HV GG ++ ID +S +   ++ LN ++SA+           S+ G    EG 
Sbjct: 61  KTVVLENVHVSGGEVEFIDDQSGRGRRITGLNAEMSAK-----------SLAGPWRIEGD 109

Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254
              D +   F I+++ P +   + ++ +L P   P+ +DL G L   +++P Y G  S A
Sbjct: 110 AALDGEHGNFSISSSQPDEKGVLRMRTKLSPDKQPVSVDLDGELKLVDRKPNYQGQLSAA 169

Query: 255 -GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313
             + +   +   + +  R+ G F++++  +RI  Y+++    +       +  +      
Sbjct: 170 IENRNSAKSANKNEQPPRVKGRFELTNERIRIPEYRMEIGPTDDPYVITGEATLDTGNAP 229

Query: 314 LLNFSENGAESMH 326
               + +G +   
Sbjct: 230 EFLLTADGQQIDV 242


>gi|323493152|ref|ZP_08098283.1| AsmA protein [Vibrio brasiliensis LMG 20546]
 gi|323312623|gb|EGA65756.1| AsmA protein [Vibrio brasiliensis LMG 20546]
          Length = 713

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/407 (12%), Positives = 125/407 (30%), Gaps = 63/407 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L+ +      +L     +   ++   F+     QA    G  + + G I     P 
Sbjct: 1   MKKLLLIIAIPVIAILGAIIALVTLVNPNQFKPLIVEQAKTQTGLDLVIDGDISWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K++ + +    +PL S ++ + ++ +D           
Sbjct: 61  VGFELGQTELRNPKGFEQLNMFKVDTVGIDVSVMPLFSQQLEIGNITLDGAAFALETLKD 120

Query: 120 GVSNWFQ--------------------------RKSTMDMIHNVILEKIHVKGGRIKIID 153
           G  N                                T      + L  + +    + + D
Sbjct: 121 GTRNIDALTQAQTAQAETPTATDAPAAQTTESSEAPTAASAWTINLAGVTISNASVDVQD 180

Query: 154 QESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------- 202
           +++     L D++L +S     ++  +      ++ +    A+G   F   +        
Sbjct: 181 KQAGSFTKLYDVSLNLSEFAVEKWTKVAFSAKGENNQQKFSAQGDAEFKLAKGFKEYALR 240

Query: 203 ----------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
                           + KI       +KA +L   +   A  + ID+ G+      + I
Sbjct: 241 NINLDASMSDPATNIESAKIGLETFEFDKANALTYSVAGNAAGLDIDMKGSASLTVDKAI 300

Query: 247 YSGVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
              + +     +K     L  S  K  ++ +         +S + L+ +  N+    D K
Sbjct: 301 SKVLMNQLVLDAKFEGDSLPQSPMKVDMASDLSFDLAKSHLS-FVLEKLTANA-LQFDGK 358

Query: 305 TKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLK 347
             V+  +   + F+ +  +   D    L ++   E+        + K
Sbjct: 359 ADVTLADIPKVRFALHSPDIDLDEFLGLQQSASEEKPSASAPESEQK 405


>gi|90424765|ref|YP_533135.1| AsmA [Rhodopseudomonas palustris BisB18]
 gi|90106779|gb|ABD88816.1| AsmA [Rhodopseudomonas palustris BisB18]
          Length = 1239

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 63/331 (19%), Positives = 129/331 (38%), Gaps = 18/331 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++  L+GL     + L+ A   PLFIDW  FR  FE +A  +VG  + V G +   +LP 
Sbjct: 1   MQTTLLGLAMALIIALIAALVGPLFIDWNQFRPRFEAEAARVVGAPVRVAGALDARLLPT 60

Query: 62  PSVFFKDIRIDQK---EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
           P++  + + + +           + + L +      L+ GE+R  ++ +    L+  L  
Sbjct: 61  PTLRLRSVVVGKAGALGQEKGLVRADKLDVEFSLGALMRGEVRATELTVGGLALDLALDP 120

Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
           +G  +W         +  + ++++++  GRI + D  S +   L+D+             
Sbjct: 121 QGRLDWPAAS-AFASLGALSIDRLNLT-GRIVLHDAASHRTLELNDI-----------AF 167

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
              +    GS+  +G      +R  F+++A  P +     L + L   A    +DL G L
Sbjct: 168 SGEVRGAAGSLRGDGNFMLAGERMPFRLSAGRPVQGSGTRLHLTLESSARAASLDLEGLL 227

Query: 239 FWNEKQPIYSGVFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
               + P + GV ++  A   +       +    RL+   K      R  + +       
Sbjct: 228 NVEARVPQFDGVVTLASAAAMAAANADAAAPMPWRLAAKLKADPAAARFDQLEASYGAEA 287

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
           ++       ++       L+ + +  +   D
Sbjct: 288 AALRLAGSAELRLGASPQLHVALSARQLDAD 318


>gi|82702310|ref|YP_411876.1| AsmA [Nitrosospira multiformis ATCC 25196]
 gi|82410375|gb|ABB74484.1| AsmA [Nitrosospira multiformis ATCC 25196]
          Length = 667

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 47/341 (13%), Positives = 111/341 (32%), Gaps = 29/341 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           +++L   G    ++++      L+ DW   +   ERQ T   G++  ++G + +++   P
Sbjct: 6   KQILSISGVALLLLVIAFV---LWFDWNMLKPYIERQVTERTGREFTIRGDLDVNLSLNP 62

Query: 63  SVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            V  + + +   E G       ++ +++R     LLSG+I + ++ I +P +    S  G
Sbjct: 63  LVSVEGLSLANAEWGTEQPMVAVDKVAVRISLWDLLSGDIVLPELSITRPRVLLEKSMDG 122

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             NW  +K     +    + +  +  G++   D ++                   + +  
Sbjct: 123 KRNWDLKKEEKKKMELPQIGQFTLDQGKVLFRDPKTKTDIAAD------------VFTDP 170

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANF--PAKNKAISLKIQLFPLAYPIIIDLFGNL 238
           ++D+ +  +     G F + +   +          +K I   I+             G +
Sbjct: 171 AVDAGELPLHVAAEGKFTDLKFTAQAQGGKIMSLADKTIPYPIKASAEMGTTRASADGTI 230

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSA-----KKSRLSGNFKISDGNVRISRYKLQSI 293
               +         + G+    L               +SG     D    +  +     
Sbjct: 231 KGLAEMAEVDLKLDLHGEDLSALYPVTGIVIFPSPPYHISGRILHHDTEWSMKGFSGNVG 290

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334
             +               E  L    +    + DL++   F
Sbjct: 291 NSD----LGGDIVFDTGGERPL-LRGDVVSKVLDLSDLQGF 326


>gi|148977652|ref|ZP_01814228.1| AsmA protein [Vibrionales bacterium SWAT-3]
 gi|145963167|gb|EDK28435.1| AsmA protein [Vibrionales bacterium SWAT-3]
          Length = 711

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 51/383 (13%), Positives = 115/383 (30%), Gaps = 59/383 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++LI +     +V+     + L ++   F+     QA    G ++ ++G I     P 
Sbjct: 1   MKKLLIFIAVPVFIVVAAILALVLLVNPNQFKPLIVEQAQKHTGLELVIEGDISWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   E        K++ + +     PL S ++ + ++ +D           
Sbjct: 61  IGFELGQTELRNPEGFTQPNLFKVDTVGVDVSVTPLFSNQLEIGNITLDGAEFYLETLKD 120

Query: 120 GVSNWFQ--------------------------RKSTMDMIHNVILEKIHVKGGRIKIID 153
           G  N                             + ++      + L  + +     ++ D
Sbjct: 121 GRKNIDALTQASASDASAPAAETTSEPAQAPQEQSASEASGWTINLAGVTISNALFEMDD 180

Query: 154 QESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------- 202
           +++     L D++L +S      +       S ++ +    A G+  F            
Sbjct: 181 KQAGSFTKLYDVSLNLSEFAVDTWTTATFAASGENNQQKFSANGSAEFKLAEGFASYALR 240

Query: 203 ----------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
                           + KI  +    +K   L   +   A  + +DL G       + I
Sbjct: 241 NIDLNAKFNDPATSIESAKIGLDTFEFDKVNQLTYAVVGKAAGLDLDLKGGGELTVDKAI 300

Query: 247 YSGVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
                +     S      L  S  K  +  +         +S + L+ +   +S   D K
Sbjct: 301 SKVTLNKLTLDSTFKGDTLPQSPMKVDMLSDLSFDLTKSHLS-FVLEKLQA-NSIALDGK 358

Query: 305 TKVSQDEENLLNFSENGAESMHD 327
             V+  +   + FS +      D
Sbjct: 359 ADVTLSDIPKVRFSLHSPNIDLD 381


>gi|306843245|ref|ZP_07475855.1| Alpha-isopropylmalate/homocitrate synthase [Brucella sp. BO2]
 gi|306286568|gb|EFM58147.1| Alpha-isopropylmalate/homocitrate synthase [Brucella sp. BO2]
          Length = 1180

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 113/279 (40%), Gaps = 17/279 (6%)

Query: 73  QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMD 132
             +       ++  SM AE +P L G++ +FDM +++P +   L   G  +W  R ST  
Sbjct: 4   GADAAHPVMTVDRFSMDAELMPFLRGQLLIFDMRVERPRVTISLDKDGKVDWAIRPSTPL 63

Query: 133 MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE 192
               + +E++ +  G + + ++ S +    S LN             LS +S+ G   A 
Sbjct: 64  DPTKIRVERLSINDGVVTLREEASGRSDTASALNAV-----------LSANSLAGPWQAN 112

Query: 193 GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS 252
           G+     ++ A  +++     +  + ++ ++ P  +P   +  G++   + +  Y+G FS
Sbjct: 113 GSFMLRGEKFAIDLSSGEAKPDGVLRVRARVSPDGFPATFETDGDVTMTDGRLDYAGDFS 172

Query: 253 VAGDFS-KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
           +          L+  A+K      R+SG FK       +S ++++    ++    +    
Sbjct: 173 LRSSDMVATAGLKKPAEKPFFSDLRVSGKFKADRERFDVSEFRMEQGPADNPYVVNGSAL 232

Query: 307 VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           +    +     S +G +     NET   E+        D
Sbjct: 233 IDYGAKPHFEVSADGQQLFWGPNETAGEEQSVSAMPIAD 271


>gi|4262670|gb|AAD14778.1| AsmA [Escherichia coli]
 gi|1582055|prf||2117401A asmA gene
          Length = 379

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 121/391 (30%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF------Y 115
            S+    + +  +       + + + +    LPLLS ++ V  + +    +         
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 116 LSSKGV---SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
            S        +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|299067668|emb|CBJ38877.1| putative outer membrane biogenesis protein, AsmA family [Ralstonia
           solanacearum CMR15]
          Length = 737

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/420 (14%), Positives = 120/420 (28%), Gaps = 51/420 (12%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58
           RV++GLG    V++  A    L  DW   +       +  +G+  A+ G + +       
Sbjct: 6   RVILGLGITPVVIVATAIVFVLTFDWNRAKPYLNDHVSQAIGRPFAINGDLALTWKKPEG 65

Query: 59  -------LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P +   DI I   +       + ++ L+   E LPLL+  I +  + +D 
Sbjct: 66  ESGWRAYVPWPRLIASDIAIGNPDWARQPHVATVQRLTFVLEALPLLAHRIVIPSVTLDT 125

Query: 110 PHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVKGGRIKIIDQ------------ 154
           P +     S+  +NW      + +      + L +I    G +++ D+            
Sbjct: 126 PMVALERDSQNRNNWTFHFGAQDSQPSDWKLELREIAFSKGSVQLDDEIKRIHLAATLDT 185

Query: 155 ---------ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK 205
                     S      ++     ++      +P        +   +GT N    R + K
Sbjct: 186 VDNQALYTAASGTAIRGNEPAAPSASGAAAPAAPDPQQPYGIAWTVKGTYNNAAIRGSGK 245

Query: 206 ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
                  ++      +Q         IDL G L              ++G     L    
Sbjct: 246 AGGVLRLQDARRPYPLQADVTVGKTRIDLAGTLTNPSSLTALDLRLHLSGASMAHLYPLT 305

Query: 266 SAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN 316
                         RL G  +    + R  ++  +    +           +   E    
Sbjct: 306 GVVLPDTPPFDTRGRLIGELRRQGSSWRYEQFTGRVGGSD----LGGTLTFAMRPEPGQR 361

Query: 317 FSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376
               G    H L   D        +     ++DD       K         +       D
Sbjct: 362 PQLTGELVSHQLLFADLAPIIGADSNASKQRRDDPVRQPADKVLPVEPFRTDRWNAIDAD 421


>gi|226942401|ref|YP_002797474.1| AsmA family protein [Azotobacter vinelandii DJ]
 gi|226717328|gb|ACO76499.1| AsmA family protein [Azotobacter vinelandii DJ]
          Length = 677

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/373 (11%), Positives = 110/373 (29%), Gaps = 34/373 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           ++L+      + ++     +    DW   +     Q +  + +  A++G + ++      
Sbjct: 6   KILVWALGGLAALIAILVVLVATFDWNRLKPRINAQVSEALKRPFAIEGDLAVNWRRPAE 65

Query: 58  ---ILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112
               LP+P +  + +R+   +   G     +E + +    L LL   +R+  + +  P  
Sbjct: 66  ESGWLPWPRISAEALRLGNPDWAEGERFVSLERVELSLSPLALLGRTVRIPQITLGGPEA 125

Query: 113 NFYLSSKGVSNWFQRK-----STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
           +    + G +NW   +             + +  +      +++ D+       +    L
Sbjct: 126 SLQRLADGRANWTFEQGDEAEDKKPSPWTLDIGTVQFDRALVRLDDRVLKADLQVEVTPL 185

Query: 168 QISARFLNIISPLSIDSIKG--------SVIAEGTGNFDNKRSAFKITAN--FPAKNKAI 217
                F  I+                  +   +  G +  +  + +         ++  +
Sbjct: 186 GAPIPFEQIVGEAQAGRAARGGGRPQDYAFAWKAQGRYQGQPLSGEGKVGGLLALQDSEL 245

Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RL 272
              +Q+   A    +   G L       +      ++GD    L+  +            
Sbjct: 246 PFPVQVDLRAGKSRLRAEGTLVSPRTLSVLDLRLRLSGDSLADLHPLIGVTLPDTAAYST 305

Query: 273 SGNFKISDGNVRISRYKLQ--SILPNSSTDEDNKTKVSQDEENLLNFSENGAE-SMHDLN 329
            G           + Y+ +  S     S    N   V+      L+      +    DL 
Sbjct: 306 EGRLSADLRAADGAEYRYRDFSGKIGDSDIHGNLAYVAGKPRPKLSGELTSNQLLFRDLG 365

Query: 330 ETDFFEEEEKKNK 342
                +   K+ +
Sbjct: 366 PLIGADTGTKREE 378


>gi|149188168|ref|ZP_01866463.1| AsmA protein [Vibrio shilonii AK1]
 gi|148838156|gb|EDL55098.1| AsmA protein [Vibrio shilonii AK1]
          Length = 702

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/435 (12%), Positives = 129/435 (29%), Gaps = 61/435 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L+ L     +++V    + +F++   F+     Q     G ++ + G I     P 
Sbjct: 1   MKKLLLILAIPIVLIVVAIAALVMFVNPNQFKPMITEQVQAQTGLELEISGDISWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +         +  + +    +PLL   + +  + +D   ++      
Sbjct: 61  LGFELGQTNLKNPQGFKNPNLFSVSQVGVSVGVMPLLDKTLEIGSVTLDGAQVHLETLKD 120

Query: 120 GVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQE 155
           G SN                             ++     ++ L  + V    ++I ++E
Sbjct: 121 GTSNLDALTAASKEAESATAADKAATEPETTSSASAAQGWSISLSGVTVSNALLEISNEE 180

Query: 156 SDQVYFLSDLNLQISA----RFLNIISPLSIDSIKGSVIAEGTGNFDNKR---------- 201
           +     L D+ L +S     ++      L   +   S  A+GT +F   +          
Sbjct: 181 TGSFTKLYDVGLNVSQFAADQWTTADFDLKGQNNDQSFTAKGTADFKLSKDFAEYALKNI 240

Query: 202 -------------SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248
                           ++T      +K  S++  +      +  D  G   +   + +  
Sbjct: 241 KFDATYQDTVNNVEQAQLTVATFEFDKPNSIEFAVKGKTPDLSFDAKGGTSFEIDKAMTM 300

Query: 249 GVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
              S     S L    L  S  K  +S +            + LQ +   +  + D K  
Sbjct: 301 LKLSALTLDSTLEGKPLPQSPMKVGMSSDLSFDLKK-NFLNFVLQKLSL-NKMELDGKAT 358

Query: 307 VSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKD 362
           V   +   + FS +      D    LN+T    +                     + +  
Sbjct: 359 VQLADIPKVRFSLHSPNIDLDEFLGLNQTQTGNKTANSGGQPTASSGKSAPVKEVEPDLS 418

Query: 363 NSHDKENQENFSGDK 377
                + + + + DK
Sbjct: 419 ALKGLDVKGSVTIDK 433


>gi|22126523|ref|NP_669946.1| putative assembly protein [Yersinia pestis KIM 10]
 gi|51595875|ref|YP_070066.1| assembly protein [Yersinia pseudotuberculosis IP 32953]
 gi|108806817|ref|YP_650733.1| putative assembly protein [Yersinia pestis Antiqua]
 gi|108812615|ref|YP_648382.1| putative assembly protein [Yersinia pestis Nepal516]
 gi|145598734|ref|YP_001162810.1| putative assembly protein [Yersinia pestis Pestoides F]
 gi|149366447|ref|ZP_01888481.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|153949099|ref|YP_001401420.1| assembly protein [Yersinia pseudotuberculosis IP 31758]
 gi|162421655|ref|YP_001607549.1| putative assembly protein [Yersinia pestis Angola]
 gi|165924646|ref|ZP_02220478.1| AsmA protein [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165939600|ref|ZP_02228145.1| AsmA protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166009233|ref|ZP_02230131.1| AsmA protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166211557|ref|ZP_02237592.1| AsmA protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167400350|ref|ZP_02305863.1| AsmA protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167421840|ref|ZP_02313593.1| AsmA protein [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167423938|ref|ZP_02315691.1| AsmA protein [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|167467522|ref|ZP_02332226.1| AsmA protein [Yersinia pestis FV-1]
 gi|170024775|ref|YP_001721280.1| putative assembly protein [Yersinia pseudotuberculosis YPIII]
 gi|186894962|ref|YP_001872074.1| putative assembly protein [Yersinia pseudotuberculosis PB1/+]
 gi|218928667|ref|YP_002346542.1| putative assembly protein [Yersinia pestis CO92]
 gi|229841507|ref|ZP_04461666.1| predicted assembly protein [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843618|ref|ZP_04463761.1| predicted assembly protein [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229894280|ref|ZP_04509463.1| predicted assembly protein [Yersinia pestis Pestoides A]
 gi|229903010|ref|ZP_04518126.1| predicted assembly protein [Yersinia pestis Nepal516]
 gi|21959522|gb|AAM86197.1|AE013866_7 suppressor of ompF assembly mutants [Yersinia pestis KIM 10]
 gi|51589157|emb|CAH20777.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
 gi|108776263|gb|ABG18782.1| hypothetical protein YPN_2454 [Yersinia pestis Nepal516]
 gi|108778730|gb|ABG12788.1| hypothetical protein YPA_0820 [Yersinia pestis Antiqua]
 gi|115347278|emb|CAL20172.1| putative exported protein [Yersinia pestis CO92]
 gi|145210430|gb|ABP39837.1| hypothetical protein YPDSF_1450 [Yersinia pestis Pestoides F]
 gi|149290821|gb|EDM40896.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|152960594|gb|ABS48055.1| AsmA protein [Yersinia pseudotuberculosis IP 31758]
 gi|162354470|gb|ABX88418.1| AsmA protein [Yersinia pestis Angola]
 gi|165912516|gb|EDR31148.1| AsmA protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165923706|gb|EDR40838.1| AsmA protein [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165991788|gb|EDR44089.1| AsmA protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166207328|gb|EDR51808.1| AsmA protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166960325|gb|EDR56346.1| AsmA protein [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167050299|gb|EDR61707.1| AsmA protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167056787|gb|EDR66550.1| AsmA protein [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|169751309|gb|ACA68827.1| AsmA family protein [Yersinia pseudotuberculosis YPIII]
 gi|186697988|gb|ACC88617.1| AsmA family protein [Yersinia pseudotuberculosis PB1/+]
 gi|229679920|gb|EEO76020.1| predicted assembly protein [Yersinia pestis Nepal516]
 gi|229689226|gb|EEO81289.1| predicted assembly protein [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697873|gb|EEO87920.1| predicted assembly protein [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229703678|gb|EEO90694.1| predicted assembly protein [Yersinia pestis Pestoides A]
 gi|320015603|gb|ADV99174.1| putative assembly protein [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 618

 Score =  155 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/392 (11%), Positives = 116/392 (29%), Gaps = 58/392 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+L  L  L  V++ G   + L ++  DFR    +Q     G  + ++G ++ H+ P 
Sbjct: 1   MRRLLTMLVILLIVLVAGMSALVLLVNPNDFRAYMVKQVEKKSGYHLQLEGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +            E + +  +  PLLS ++ V  + +    +     S+  
Sbjct: 61  LSIIAGRMALTAPGALEPVVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLTPDSEAQ 120

Query: 122 SNWFQR----------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
                             + +    + + ++ +    +     ++DQ   + D+NL++  
Sbjct: 121 QQIDAPVAPIAPAGSTPVSDNRGWTLDINRLQIADSLLIWQRSDNDQ-INVRDINLELK- 178

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
                                  G     +       N   ++   S+ I      YP  
Sbjct: 179 ----------------------QGGQRQVQVTLASRVNRNQRDLTFSMVIDADMHQYPRQ 216

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
                         I    + + G       +        L  +++     + +++    
Sbjct: 217 FSAN----------ISQFTYKLEGADIPAGGISGGG---ALEASYQSDIQQLLLNQLNFT 263

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
           +    ++       K +  +      +        D      F  + K +     +    
Sbjct: 264 A----NNNQLAGSVKATFGDVPDYVVNLTSDNLNLD----AIFGWQPKSSTASTDEAKQP 315

Query: 352 QYSV---NKKEEKDNSHDKENQENFSGDKMIL 380
             +      + + D   + +   +F+    ++
Sbjct: 316 VTTAPVIAIQIDDDVGQNLQALRDFTAQTTVV 347


>gi|254507745|ref|ZP_05119876.1| AsmA protein [Vibrio parahaemolyticus 16]
 gi|219549270|gb|EED26264.1| AsmA protein [Vibrio parahaemolyticus 16]
          Length = 708

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/422 (13%), Positives = 132/422 (31%), Gaps = 61/422 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ + +      +L     + L ++   F+     QA    G ++ + G I     P 
Sbjct: 3   MKKLFLFVAIPIIAILGAILALVLLVNPNQFKPMIIEQAKTQTGLELVIDGDISWQFFPS 62

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +      +   +  S     K++ + +     PL + ++ + ++ +D   ++      
Sbjct: 63  IGLELGQTELRNPQGFSKLNMFKVDSVVIDVSVTPLFNKQLEIGNVVLDGAQVSLETLKD 122

Query: 120 GVSNWFQ----------------------------RKSTMDMIHNVILEKIHVKGGRIKI 151
           G  N                                 +      ++ L  + +    ++I
Sbjct: 123 GRKNIDALTKAQSTQAQTAESSTQEAPSTTEPRATETTPATSDWSIQLAGVTISNAGVEI 182

Query: 152 IDQESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS----- 202
            D ++     L D+NL +S      ++        ++ +    A G   F   +      
Sbjct: 183 QDLQAGSFTKLYDVNLSLSEFAFDEWVKADFGAKGETNQQKFAASGHAEFQLAKGFAKYA 242

Query: 203 ------------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
                               K++ +    + A SL  ++   A  + ID+ G       +
Sbjct: 243 LRNIKLESSFSDATTKMDTIKLSLDTFEFDAANSLSYEVKGKAADLSIDMTGAATLTVDE 302

Query: 245 PIYSGVFSVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
            I   V       +      L  S  K  ++ +         +S + L+S+  N+    D
Sbjct: 303 AISKVVLDKMSLDASFEGDALPQSPMKVAMASDLTFDLNKSHLS-FVLESLTANA-LAFD 360

Query: 303 NKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKD 362
            K +V+  E   + F+ +      D         ++K+        D    + +++ E D
Sbjct: 361 GKAEVTLAEIPKVRFALHSPNIDLDEFLGLGQAPQDKEQAPSSGSGDSKPATPSEEVEPD 420

Query: 363 NS 364
            S
Sbjct: 421 LS 422


>gi|331663558|ref|ZP_08364468.1| protein AsmA [Escherichia coli TA143]
 gi|331059357|gb|EGI31334.1| protein AsmA [Escherichia coli TA143]
          Length = 617

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 121/391 (30%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF------Y 115
            S+    + +  +       + + + +    LPLLS ++ V  + +    +         
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 116 LSSKG---VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
            S        +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAQRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|227113137|ref|ZP_03826793.1| putative assembly protein [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 611

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/381 (12%), Positives = 116/381 (30%), Gaps = 53/381 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  VV+ G   + + ++  DFR    +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLAILLVVVVAGMTALVVLVNPNDFRAYMVKQVEERSGYRLQLDGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +      +     E + +  +  PLLS ++ V  + +    +     S+  
Sbjct: 61  LSILSGGMSLSAPGSSAPIVSAENMRLDVQLWPLLSHKLAVKQVMLKGAIIRLTPESEAK 120

Query: 122 S--NWFQRKSTMDMI-----HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
              N     +            + ++KI V    + I+ + +++   + D+NL +     
Sbjct: 121 QSNNAPIAPAGSQTPSEERHWRLDIDKIKVAD-SLLILQRSNNEQINVRDINLAMEQNSD 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                             N   ++ A SL   +  L +P  ++ 
Sbjct: 180 R-----------------------QVSIELSSRINRDQRDIAFSLAADVDLLHFPQQVNA 216

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                           + + G       +  +     +  +++     +  S+  L    
Sbjct: 217 NIT----------KLDYQLQGAGIPANGISGTG---SVQASYQQQPEKITFSQLSLN--- 260

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354
             +++       V+  +           +   D +       +E        K      S
Sbjct: 261 -TNNSQLSGAGSVTLGDIPHYELELLSEKLDLD-SLLGIASVKENNAAVVPAKSSAPVIS 318

Query: 355 VNKKEEKDNSHDKENQENFSG 375
                E   +  ++  + F+ 
Sbjct: 319 ----NESGLAKPEDGLQTFTA 335


>gi|17545492|ref|NP_518894.1| hypothetical protein RSc0773 [Ralstonia solanacearum GMI1000]
 gi|17427785|emb|CAD14475.1| putative involved in outer membrane biogenesis transmembrane
           protein [Ralstonia solanacearum GMI1000]
          Length = 740

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 63/423 (14%), Positives = 120/423 (28%), Gaps = 54/423 (12%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58
           RV++GLG    V++  A    L  DW   +       +  VG+  A+ G + +       
Sbjct: 6   RVILGLGITPIVIVAAAIVFVLTFDWNRAKPYLNDHVSQAVGRPFAINGDLALTWKKPEG 65

Query: 59  -------LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P +   DI I   +       + ++ L+   E LPLL+  I +  + +D 
Sbjct: 66  ESGWRAYVPWPRLIASDIAIGNPDWARQPHVATVQRLTFVLEALPLLAHRIVIPSVTLDT 125

Query: 110 PHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVKGGRIKIIDQE-----SDQVYF 161
           P +     S+  +NW      + +      + L +I    G +++ D+      +  +  
Sbjct: 126 PMIALERDSQNRNNWTFHFGAQDSQPSDWKLELREIAFSKGSVQLDDEVKRIHLAATLDT 185

Query: 162 LSDLNLQISARFLNIISPLSIDSI-------------------KGSVIAEGTGNFDNKRS 202
           + +  L  +A    I                              +   +GT N    R 
Sbjct: 186 VDNQALYTAASGTAIRGSEPAAPSASGAAASTAPAAPDPQQPYGIAWTVKGTYNNAAIRG 245

Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262
           + K       ++      +Q         IDL G L              ++G     L 
Sbjct: 246 SGKAGGVLRLQDARRPYPLQADVTVGKTRIDLAGTLTNPSSLTALDLRLHLSGASMAHLY 305

Query: 263 LELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313
                            RL G  +    + R  ++  +    +           +   E 
Sbjct: 306 PLTGVVLPDTPPFDTRGRLIGELRRQGSSWRYEQFTGRVGGSD----LGGTLTFAMRPEP 361

Query: 314 LLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENF 373
                  G    H L   D        +     ++D        K         +     
Sbjct: 362 GQRPQLTGELVSHQLLFADLAPIIGADSNASKQRRDAPVRQPADKVLPVEPFRTDRWNAI 421

Query: 374 SGD 376
             D
Sbjct: 422 DAD 424


>gi|254524681|ref|ZP_05136736.1| AsmA family membrane protein [Stenotrophomonas sp. SKA14]
 gi|219722272|gb|EED40797.1| AsmA family membrane protein [Stenotrophomonas sp. SKA14]
          Length = 657

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/365 (11%), Positives = 104/365 (28%), Gaps = 32/365 (8%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIE 84
            DW  F+   ER      G+ + + G + + +    +V    I             +  +
Sbjct: 45  WDWNWFKGPVERAVQARTGRVLHI-GHLDVDLGRTSTVRADAITFANASWAKQPDMATAD 103

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS-KGVSNWFQRKSTMDMIHNVILEKIH 143
            + +     PLL G +++ ++ + +P +    +  KG    +             L+++ 
Sbjct: 104 RVEIDVRVWPLLRGSVQLPEVRLTRPDVLLETAPRKGEPGNWDFLGDSAGGPGPQLKRLR 163

Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203
           +  GR++ +D        L                          ++ +G G +      
Sbjct: 164 IDDGRLQFLDALGRTDIRLD-----------VRSGQPKQADAAPPLLVQGKGRWQGNPFT 212

Query: 204 FKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261
            +     P +  +     +I L   A        G L    +  ++   F+++G     L
Sbjct: 213 LRGGTESPLQLTDSDHPFRIHLDGHAGATHAVASGTLTNPFQLRVFDLQFALSGQDLADL 272

Query: 262 NLELSAKKSR-----LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN 316
              L           L+G  K      R  ++  +    +         +          
Sbjct: 273 YPLLGIAIPSSPPYALNGRLKRDHDTWRYEQFTGKVGDSD----LGGNLQFDVGGARP-R 327

Query: 317 FSENGAESMHDLNETDFF-----EEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371
            +        D ++   F     +    +  N + K +  + +   +   D  ++     
Sbjct: 328 LTATLESRRLDFDDLAGFVGAPPKTGSGETANAEQKAEAARIAARARVLPDTPYNLGKLR 387

Query: 372 NFSGD 376
               D
Sbjct: 388 AMDAD 392


>gi|242238644|ref|YP_002986825.1| assembly protein [Dickeya dadantii Ech703]
 gi|242130701|gb|ACS85003.1| AsmA family protein [Dickeya dadantii Ech703]
          Length = 599

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/386 (14%), Positives = 120/386 (31%), Gaps = 50/386 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+   L  L  V+  G   + L I+  DFR+   RQ     G ++ + G ++ H+ P 
Sbjct: 1   MRRLFTALIILLVVLAAGMSALVLLINPNDFRDYMVRQVEARTGYRLTLSGELRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +            E + +  +  PLLS ++ +  + +    +     S+  
Sbjct: 61  LSILSGGMSLSAPGAAVPVVSAENMRLDVKLWPLLSHQLEIRQVMLKDAVVRLTTESEAR 120

Query: 122 SNWF-------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                        +   D   +  L ++ +    +     +S     + D+NL + +   
Sbjct: 121 KAASVPIAPAGSPEPETDSRWHFDLGRVEIVDSLLVFQRGDS-PPINVRDINLTMESVGQ 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                     ++AF    N   +  + ++K +L   AYP  + +
Sbjct: 180 R-----------------------QVQAAFSSRINRDQRELSFAMKARLDMQAYPQQVAM 216

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                      I S  + + G        E    +  +  N++    +V I  + L +  
Sbjct: 217 N----------IASLDYQLQGAGVP---PEGIRGQGSMQVNYQRQPESVTIGSFSLTA-- 261

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354
             +++                  +        D       ++ +      D        S
Sbjct: 262 --NNSALVGSASAVLGAVPDYQLTLKSERLDVDTL-LGLTQKADGDAGKADKTTAAPVIS 318

Query: 355 VNKKEEKDN-SHDKENQENFSGDKMI 379
             +  E D    D   +   + DK+I
Sbjct: 319 REQTTEPDQALRDFRARVAVAADKLI 344


>gi|50120352|ref|YP_049519.1| putative assembly protein [Pectobacterium atrosepticum SCRI1043]
 gi|49610878|emb|CAG74323.1| putative outer membrane assembly protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 611

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 45/367 (12%), Positives = 111/367 (30%), Gaps = 49/367 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + + ++  DFR    +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLAILLVVLVAGMTALVVLVNPNDFRAYMVKQVEERSGYRLQLDGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +      +     E + +  +  PLLS ++ V  + +    +     S+  
Sbjct: 61  LSILSGGMSLSAPGSSAPIVSAENMRLDVQLWPLLSHKLAVKQVMLKGAIIRLTPESEAK 120

Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
            +             + +    + ++KI V    + I+ + +++   + D+NL +     
Sbjct: 121 QSNTAPIAPMGSQAPSEERRWRLDIDKIKVAD-SLLILQRSNNEQINVRDINLAMEQSSD 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                             N   ++ A SL   +  L +P  ++ 
Sbjct: 180 R-----------------------QISIELSSRINRDQRDIAFSLAADVDLLHFPQQVNA 216

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                           + + G       +        +  +++     +  S+  L    
Sbjct: 217 NIT----------KLDYQLQGAGIPANGIS---GTGSVQASYQQQPEKITFSQLSLN--- 260

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354
             +++       V+  +           +   D +       +E       +K      S
Sbjct: 261 -TNNSQLSGVGSVTLGDVPHYELDLLSEKLDLD-SLLGIASVKENNAPTVAVKPSAPVIS 318

Query: 355 VNKKEEK 361
                 K
Sbjct: 319 NESGTAK 325


>gi|260779286|ref|ZP_05888178.1| AsmA protein [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605450|gb|EEX31745.1| AsmA protein [Vibrio coralliilyticus ATCC BAA-450]
          Length = 721

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 53/439 (12%), Positives = 131/439 (29%), Gaps = 66/439 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ + +     +++     + L ++   F+     QA    G ++ ++G I     P 
Sbjct: 1   MKKLFLFIAIPLVIIIGALLALVLLVNPNQFKPLIVEQAQKQTGLELVIEGDISWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PL S ++ + ++ +D           
Sbjct: 61  IGFELGKTELRNPQGFSQPNMFKVETVGVDVSVMPLFSQQLEIGNITLDGAEFYLETLKD 120

Query: 120 GVSNWFQ-----------------------------RKSTMDMIHNVILEKIHVKGGRIK 150
           G  N                                   +      + L  + V    ++
Sbjct: 121 GRKNIDALTQAQNTHTEAVTTDAPNTEAPADAAPTESSPSPASAWTINLAGVTVSNAAVE 180

Query: 151 IIDQESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS---- 202
           I D+++     L D++L +S      +         ++ + +  A+G+  F   +     
Sbjct: 181 IQDKQAGSYTKLYDVSLNLSEFAVDTWTKADFAAKGENNQQNFTAQGSAEFKLAKGFAEY 240

Query: 203 -------------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243
                              + K+       +KA +L   +   A  + ID+ G       
Sbjct: 241 ALRNIDLNASFSDPATEMDSIKLGLETFEFDKANALTYSVAGQAAGLDIDMKGAGALTVD 300

Query: 244 QPIYSGVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
           + I   V +     +      L  S  K  ++ +         +S + L+ +  N+    
Sbjct: 301 KAISKVVMNKLTLDATFKGDSLPQSPMKVDMASDLTFDLTKSHLS-FVLEKLTANA-LAF 358

Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361
           D K  V+  +   + F+ +      D    +F    +             Q + +     
Sbjct: 359 DGKADVTLGDIPKVRFALHSPNIDLD----EFLGLNKPAENTSASGTAGTQNTGSTSSSS 414

Query: 362 DNSHDKENQENFSGDKMIL 380
            ++   + Q     D   L
Sbjct: 415 ASASASKPQAEVEPDLSAL 433


>gi|227326679|ref|ZP_03830703.1| putative assembly protein [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 611

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 48/381 (12%), Positives = 118/381 (30%), Gaps = 53/381 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + + ++  DFR    +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLAILLVVLVAGMTALVVLVNPNDFRAYMVKQVEERSGYRLQLDGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +      +     E + +  +  PLLS ++ V  + +    +     S+  
Sbjct: 61  LSILSGGMSLSAPGSSAPIVSAENMRLDVQLWPLLSHKLAVKQVMLKGAIIRLTPESEAK 120

Query: 122 S--NWFQRKSTMDMI-----HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
              N     +            + ++KI V    + I+ + +++   + D+NL +     
Sbjct: 121 QANNAPIAPAGSQTPSEERHWRLDIDKIKVAD-SLLILQRSNNEQINVRDINLAMEQNSD 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                             N   ++ A SL   +  L +P  ++ 
Sbjct: 180 R-----------------------QVNIELSSRINRDQRDIAFSLAADVDLLHFPQQVNA 216

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                           + + G       +  +     +  +++   G +  S+  L    
Sbjct: 217 NIT----------KLDYQLQGAGIPANGISGTG---SVQASYQQQPGKITFSQLSLN--- 260

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354
             +++       V+  +           +   D +       +E        K      S
Sbjct: 261 -TNNSQLSGAGSVTLGDIPHYELDLLSEKLDLD-SLLGIASVKENNASVVPAKSSAPVIS 318

Query: 355 VNKKEEKDNSHDKENQENFSG 375
                E   +  +++ + F+ 
Sbjct: 319 ----NESGLTKPEDSLQTFTA 335


>gi|89898901|ref|YP_521372.1| AsmA [Rhodoferax ferrireducens T118]
 gi|89343638|gb|ABD67841.1| AsmA [Rhodoferax ferrireducens T118]
          Length = 669

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 39/341 (11%), Positives = 104/341 (30%), Gaps = 25/341 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60
           L R L  +       +V A        W   R   ER A    G+ +A+ G +++ +  P
Sbjct: 12  LPRSLKWIAGAVIAPVVLALLFIAIFGWNWLRAPIERMALEKTGRVLAINGDLRVTLGWP 71

Query: 61  FPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
            P +    +                + + +  +   LL  ++   ++ +++P +     +
Sbjct: 72  RPRLRANAVTFANPLWTQEKQMLAADAVEITLDLSQLLGRKLVFPELRLERPVVFLEQGT 131

Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
           +G  +W   +   D    + ++++ +  G +   D            +L          +
Sbjct: 132 EGRKSWLLDQQQQDPGARIQIDRLTLDQGTLGYDDAVQKTSIRAELASL----------T 181

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANF--PAKNKAISLKIQLFPLAYPIIIDLFG 236
           P +  +    +     G +  +    +         ++++    + +        +   G
Sbjct: 182 PPAGSTADTGLTFSAHGRYKGQALTAQGNGGPVLALRDESTPYPLTIDASVGHTRVRAEG 241

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-----GNFKISDGNVRISRYKLQ 291
           ++    K        +++GD    L   L             G+   S  + R  ++  +
Sbjct: 242 SVTSLLKFTAVDLALALSGDNLAQLYPLLGITFPATRSYVTAGHLLHSGNSWRYEKFSGR 301

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETD 332
               +         +V    +     +     S+ DL +  
Sbjct: 302 IGTSD----IAGSLQVKTGGQRP-ALTAELTSSVLDLADLG 337


>gi|253687684|ref|YP_003016874.1| AsmA family protein [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|251754262|gb|ACT12338.1| AsmA family protein [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 611

 Score =  153 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 44/363 (12%), Positives = 110/363 (30%), Gaps = 49/363 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + + ++  DFR    +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLAILLVVLVAGMTALVVLVNPNDFRAYMVKQVEERSGYRLQLDGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +      +     E + +  +  PLLS ++ V  + +    +     S+  
Sbjct: 61  LSILSGGMSLSAPGSSAPIVSAENMRLDVQLWPLLSHKLAVKQVMLKGAIIRLTPESEAK 120

Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                          + +    + ++KI V    + I+ + +++   + D+NL +     
Sbjct: 121 QANNAPIAPAGSQAPSEERRWRLDIDKIKVAD-SLLILQRSNNEQINVRDINLAMEQNSD 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                             N   ++ A SL   +  L +P  ++ 
Sbjct: 180 R-----------------------QVNIELSSRINRDQRDIAFSLAADVDLLRFPQQVNA 216

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                           F + G       +  +     +  +++     +  S+  L    
Sbjct: 217 NIT----------KLDFQLQGAEIPPGGISGTG---SVQASYQQQPEKITFSQLSLN--- 260

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354
             +++       V+  +    +      +   D +       +        +K      S
Sbjct: 261 -TNNSQLSGAGSVTLGDIPHYDLDLLSEKLDLD-SLLGIEVVKGNSTSKAPVKSSTPVIS 318

Query: 355 VNK 357
              
Sbjct: 319 NES 321


>gi|194436197|ref|ZP_03068299.1| AsmA protein [Escherichia coli 101-1]
 gi|253773004|ref|YP_003035835.1| assembly protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162056|ref|YP_003045164.1| putative assembly protein [Escherichia coli B str. REL606]
 gi|297518931|ref|ZP_06937317.1| putative assembly protein [Escherichia coli OP50]
 gi|300899779|ref|ZP_07117999.1| AsmA family protein [Escherichia coli MS 198-1]
 gi|300928188|ref|ZP_07143729.1| AsmA family protein [Escherichia coli MS 187-1]
 gi|301026347|ref|ZP_07189797.1| AsmA family protein [Escherichia coli MS 196-1]
 gi|194424925|gb|EDX40910.1| AsmA protein [Escherichia coli 101-1]
 gi|242377715|emb|CAQ32476.1| predicted assembly protein AsmA [Escherichia coli BL21(DE3)]
 gi|253324048|gb|ACT28650.1| AsmA family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253973957|gb|ACT39628.1| predicted assembly protein [Escherichia coli B str. REL606]
 gi|253978151|gb|ACT43821.1| predicted assembly protein [Escherichia coli BL21(DE3)]
 gi|299879738|gb|EFI87949.1| AsmA family protein [Escherichia coli MS 196-1]
 gi|300356658|gb|EFJ72528.1| AsmA family protein [Escherichia coli MS 198-1]
 gi|300463783|gb|EFK27276.1| AsmA family protein [Escherichia coli MS 187-1]
 gi|323961753|gb|EGB57355.1| AsmA family protein [Escherichia coli H489]
 gi|323972786|gb|EGB67985.1| AsmA family protein [Escherichia coli TA007]
          Length = 617

 Score =  153 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|315618157|gb|EFU98748.1| protein asmA [Escherichia coli 3431]
          Length = 617

 Score =  153 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|300921732|ref|ZP_07137898.1| AsmA family protein [Escherichia coli MS 182-1]
 gi|301329932|ref|ZP_07222653.1| AsmA family protein [Escherichia coli MS 78-1]
 gi|300421870|gb|EFK05181.1| AsmA family protein [Escherichia coli MS 182-1]
 gi|300844031|gb|EFK71791.1| AsmA family protein [Escherichia coli MS 78-1]
          Length = 617

 Score =  153 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|74312589|ref|YP_311008.1| putative assembly protein [Shigella sonnei Ss046]
 gi|73856066|gb|AAZ88773.1| suppressor of ompF assembly mutants [Shigella sonnei Ss046]
          Length = 621

 Score =  153 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSVLVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|187732274|ref|YP_001879815.1| putative assembly protein [Shigella boydii CDC 3083-94]
 gi|331683748|ref|ZP_08384344.1| protein AsmA [Escherichia coli H299]
 gi|187429266|gb|ACD08540.1| AsmA protein [Shigella boydii CDC 3083-94]
 gi|331078700|gb|EGI49902.1| protein AsmA [Escherichia coli H299]
          Length = 617

 Score =  153 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|291283306|ref|YP_003500124.1| putative assembly protein AsmA [Escherichia coli O55:H7 str.
           CB9615]
 gi|312967298|ref|ZP_07781514.1| protein asmA [Escherichia coli 2362-75]
 gi|168986332|dbj|BAG11872.1| predicted assembly protein [Escherichia coli O55:H7]
 gi|168986448|dbj|BAG11986.1| predicted assembly protein AsmA [Escherichia coli O55:H6]
 gi|290763179|gb|ADD57140.1| Predicted assembly protein AsmA [Escherichia coli O55:H7 str.
           CB9615]
 gi|312288106|gb|EFR16010.1| protein asmA [Escherichia coli 2362-75]
 gi|320657487|gb|EFX25285.1| putative assembly protein [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320663303|gb|EFX30608.1| putative assembly protein [Escherichia coli O55:H7 str. USDA 5905]
          Length = 617

 Score =  153 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|193069267|ref|ZP_03050223.1| AsmA protein [Escherichia coli E110019]
 gi|194428760|ref|ZP_03061296.1| AsmA protein [Escherichia coli B171]
 gi|192957400|gb|EDV87847.1| AsmA protein [Escherichia coli E110019]
 gi|194413207|gb|EDX29493.1| AsmA protein [Escherichia coli B171]
          Length = 617

 Score =  153 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 124/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               +++    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NNSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|251790449|ref|YP_003005170.1| putative assembly protein [Dickeya zeae Ech1591]
 gi|247539070|gb|ACT07691.1| AsmA family protein [Dickeya zeae Ech1591]
          Length = 604

 Score =  153 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 44/327 (13%), Positives = 106/327 (32%), Gaps = 48/327 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+L  L  L  V+  G   + + I+  DFR    R+     G ++ + G ++ H+ P 
Sbjct: 1   MRRLLTALVILLVVLAAGMTALVVLINPNDFRAYMVRKVEARTGYRLNLDGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+   ++ +      +     E + +  +  PLLS ++ V  + +    +     S+  
Sbjct: 61  LSILSGNLSVSAPGAAAPVISAENMRLDVKLWPLLSHQLEVKQVMLKGAVIRLTPDSEAK 120

Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                         S  +      + ++ V    +    + +  V  + D+NL++ +   
Sbjct: 121 VAGPAPIAPAGSSVSEPETPWRFDVNRVEVADSVLVF-QRGNAPVLNVRDINLKMESDDT 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                     R +     N   ++ + SL   L    YP  I  
Sbjct: 180 R-----------------------QVRVSLSSRFNRDQRDLSFSLDALLDMQNYPQQIGA 216

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                      I S  + + G       +     K  + G+++     + ++++ L +  
Sbjct: 217 D----------IGSVNYQLQGAGLPTEGIS---GKGAIRGSYQRQPEKLTVNQFTLSA-- 261

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENG 321
             +++  +     +         +   
Sbjct: 262 --NNSQLNGSLSATFGTTPEYVLALQS 286


>gi|293410428|ref|ZP_06654004.1| asmA [Escherichia coli B354]
 gi|291470896|gb|EFF13380.1| asmA [Escherichia coli B354]
          Length = 617

 Score =  152 bits (384), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|218690122|ref|YP_002398334.1| putative assembly protein [Escherichia coli ED1a]
 gi|218427686|emb|CAR08594.2| putative inner membrane protein involved in outer membrane protein
           assembly [Escherichia coli ED1a]
 gi|332343845|gb|AEE57179.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 617

 Score =  152 bits (384), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|193062919|ref|ZP_03044012.1| AsmA protein [Escherichia coli E22]
 gi|260844675|ref|YP_003222453.1| putative assembly protein AsmA [Escherichia coli O103:H2 str.
           12009]
 gi|192931562|gb|EDV84163.1| AsmA protein [Escherichia coli E22]
 gi|257759822|dbj|BAI31319.1| predicted assembly protein AsmA [Escherichia coli O103:H2 str.
           12009]
          Length = 617

 Score =  152 bits (384), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|16130004|ref|NP_416568.1| predicted assembly protein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89108884|ref|AP_002664.1| predicted assembly protein [Escherichia coli str. K-12 substr.
           W3110]
 gi|157155494|ref|YP_001463417.1| putative assembly protein [Escherichia coli E24377A]
 gi|170019609|ref|YP_001724563.1| putative assembly protein [Escherichia coli ATCC 8739]
 gi|170081694|ref|YP_001731014.1| assembly protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188491815|ref|ZP_02999085.1| AsmA protein [Escherichia coli 53638]
 gi|215487287|ref|YP_002329718.1| putative assembly protein [Escherichia coli O127:H6 str. E2348/69]
 gi|238901254|ref|YP_002927050.1| putative assembly protein [Escherichia coli BW2952]
 gi|256017764|ref|ZP_05431629.1| putative assembly protein [Shigella sp. D9]
 gi|260856047|ref|YP_003229938.1| putative assembly protein AsmA [Escherichia coli O26:H11 str.
           11368]
 gi|293446420|ref|ZP_06662842.1| asmA [Escherichia coli B088]
 gi|300816691|ref|ZP_07096912.1| AsmA family protein [Escherichia coli MS 107-1]
 gi|309792944|ref|ZP_07687372.1| AsmA family protein [Escherichia coli MS 145-7]
 gi|312973688|ref|ZP_07787860.1| protein asmA [Escherichia coli 1827-70]
 gi|331653492|ref|ZP_08354493.1| protein AsmA [Escherichia coli M718]
 gi|331668760|ref|ZP_08369608.1| protein AsmA [Escherichia coli TA271]
 gi|332278782|ref|ZP_08391195.1| AsmA protein [Shigella sp. D9]
 gi|2506899|sp|P28249|ASMA_ECOLI RecName: Full=Protein AsmA; Flags: Precursor
 gi|1736768|dbj|BAA15917.1| predicted assembly protein [Escherichia coli str. K12 substr.
           W3110]
 gi|1788378|gb|AAC75125.1| predicted assembly protein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|157077524|gb|ABV17232.1| AsmA protein [Escherichia coli E24377A]
 gi|168986389|dbj|BAG11928.1| predicted assembly protein AsmA [Escherichia coli O55:H7]
 gi|169754537|gb|ACA77236.1| AsmA family protein [Escherichia coli ATCC 8739]
 gi|169889529|gb|ACB03236.1| predicted assembly protein [Escherichia coli str. K-12 substr.
           DH10B]
 gi|188487014|gb|EDU62117.1| AsmA protein [Escherichia coli 53638]
 gi|215265359|emb|CAS09754.1| predicted assembly protein [Escherichia coli O127:H6 str. E2348/69]
 gi|238862170|gb|ACR64168.1| predicted assembly protein [Escherichia coli BW2952]
 gi|257754696|dbj|BAI26198.1| predicted assembly protein AsmA [Escherichia coli O26:H11 str.
           11368]
 gi|260448836|gb|ACX39258.1| AsmA family protein [Escherichia coli DH1]
 gi|291323250|gb|EFE62678.1| asmA [Escherichia coli B088]
 gi|300530921|gb|EFK51983.1| AsmA family protein [Escherichia coli MS 107-1]
 gi|308123230|gb|EFO60492.1| AsmA family protein [Escherichia coli MS 145-7]
 gi|309702388|emb|CBJ01710.1| putative outer membrane assembly protein [Escherichia coli ETEC
           H10407]
 gi|310332283|gb|EFP99518.1| protein asmA [Escherichia coli 1827-70]
 gi|315136698|dbj|BAJ43857.1| putative assembly protein [Escherichia coli DH1]
 gi|323152455|gb|EFZ38743.1| protein asmA [Escherichia coli EPECa14]
 gi|323161873|gb|EFZ47749.1| protein asmA [Escherichia coli E128010]
 gi|323168814|gb|EFZ54494.1| protein asmA [Shigella sonnei 53G]
 gi|323172652|gb|EFZ58286.1| protein asmA [Escherichia coli LT-68]
 gi|323183846|gb|EFZ69237.1| protein asmA [Escherichia coli 1357]
 gi|323936869|gb|EGB33153.1| AsmA family protein [Escherichia coli E1520]
 gi|323948422|gb|EGB44405.1| AsmA family protein [Escherichia coli H120]
 gi|324019218|gb|EGB88437.1| AsmA family protein [Escherichia coli MS 117-3]
 gi|324119093|gb|EGC12982.1| AsmA family protein [Escherichia coli E1167]
 gi|331048341|gb|EGI20417.1| protein AsmA [Escherichia coli M718]
 gi|331063954|gb|EGI35865.1| protein AsmA [Escherichia coli TA271]
 gi|332101134|gb|EGJ04480.1| AsmA protein [Shigella sp. D9]
          Length = 617

 Score =  152 bits (384), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|331677974|ref|ZP_08378649.1| protein AsmA [Escherichia coli H591]
 gi|331074434|gb|EGI45754.1| protein AsmA [Escherichia coli H591]
          Length = 617

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 124/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               +++    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NNSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|218705599|ref|YP_002413118.1| putative assembly protein [Escherichia coli UMN026]
 gi|293405539|ref|ZP_06649531.1| asmA [Escherichia coli FVEC1412]
 gi|298381223|ref|ZP_06990822.1| AsmA protein [Escherichia coli FVEC1302]
 gi|218432696|emb|CAR13590.1| putative inner membrane protein involved in outer membrane protein
           assembly [Escherichia coli UMN026]
 gi|291427747|gb|EFF00774.1| asmA [Escherichia coli FVEC1412]
 gi|298278665|gb|EFI20179.1| AsmA protein [Escherichia coli FVEC1302]
          Length = 617

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQVNWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|209919529|ref|YP_002293613.1| putative assembly protein [Escherichia coli SE11]
 gi|218554632|ref|YP_002387545.1| putative assembly protein [Escherichia coli IAI1]
 gi|218695687|ref|YP_002403354.1| putative assembly protein [Escherichia coli 55989]
 gi|209912788|dbj|BAG77862.1| suppressor of ompF assembly mutants [Escherichia coli SE11]
 gi|218352419|emb|CAU98193.1| putative inner membrane protein involved in outer membrane protein
           assembly [Escherichia coli 55989]
 gi|218361400|emb|CAQ98987.1| putative inner membrane protein involved in outer membrane protein
           assembly [Escherichia coli IAI1]
 gi|320198756|gb|EFW73356.1| AsmA protein [Escherichia coli EC4100B]
          Length = 617

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|170681043|ref|YP_001743075.1| putative assembly protein [Escherichia coli SMS-3-5]
 gi|170518761|gb|ACB16939.1| AsmA protein [Escherichia coli SMS-3-5]
 gi|315299474|gb|EFU58725.1| AsmA family protein [Escherichia coli MS 16-3]
          Length = 617

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|316933217|ref|YP_004108199.1| AsmA family protein [Rhodopseudomonas palustris DX-1]
 gi|315600931|gb|ADU43466.1| AsmA family protein [Rhodopseudomonas palustris DX-1]
          Length = 1277

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 55/306 (17%), Positives = 117/306 (38%), Gaps = 17/306 (5%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81
             P  IDW  FR  FE +AT ++G ++ V G +   +LP PS+  + + +    D     
Sbjct: 21  VGPFLIDWNQFRGPFEAEATRVLGAQVRVAGPLDARLLPTPSLRLQRVTVGGANDAG-RV 79

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEK 141
               L +      L+ GE+R  ++ I+   L+  L  +G  +W         +  + +++
Sbjct: 80  GAAKLDVEFSLGSLMRGELRADELSINGLSLDLGLDPQGRLDWPAAGL--SNLAALTVDR 137

Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201
           +++  GRI + D  S     LSD+                + +   ++  +G      +R
Sbjct: 138 LNLT-GRIALHDAASRSNLELSDI-----------AFSGELRAQAAALRGDGNFLLGGQR 185

Query: 202 SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261
             F+++    A   AI L+  +   A  I  DL G + +++ +P + G   +A   +   
Sbjct: 186 YPFRLSTGRAADGAAIRLRAGINQGAGGIAADLDGLVRFDQGRPRFDGTALLAALAAVAG 245

Query: 262 NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321
             E      R++   +      ++   ++     + +       +        L+   + 
Sbjct: 246 --ETPRTPWRIAAKIEADPVRAQLDEVEVSWGAEDRALKLAGSGEARFGAVPRLDAKLSA 303

Query: 322 AESMHD 327
            +   D
Sbjct: 304 RQLDAD 309


>gi|320172671|gb|EFW47906.1| AsmA protein [Shigella dysenteriae CDC 74-1112]
          Length = 617

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|261822286|ref|YP_003260392.1| assembly protein [Pectobacterium wasabiae WPP163]
 gi|261606299|gb|ACX88785.1| AsmA family protein [Pectobacterium wasabiae WPP163]
          Length = 611

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 45/386 (11%), Positives = 115/386 (29%), Gaps = 49/386 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + + ++  DFR    +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLAILLVVLVAGMAALVVLVNPNDFRAYMVKQVEERSGYRLQLDGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +      +     E + +  +  PLLS ++ V  + +    +     S+  
Sbjct: 61  LSILSGGMSLSAPGSSAPIVSAENMRLDVQLWPLLSHKLAVKQVMLKGAIIRLTPESEAR 120

Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                          + +    + ++KI V    + I+ + +++   + D+NL +     
Sbjct: 121 QANNAPIAPVGSQAPSEERRWRLDIDKIKVAD-SLLILQRSNNEQINVRDINLAMEQNSD 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                             N   ++ A SL   +  L +P  ++ 
Sbjct: 180 R-----------------------QINIELSSRINRDQRDIAFSLAADVDLLRFPEQVNA 216

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                           + + G       +        +  +++     +  ++  L    
Sbjct: 217 TIT----------KLDYQLQGAGIPTTGIS---GTGSVQVSYQQQPEKITFNQLVLN--- 260

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-LNETDFFEEEEKKNKNDDLKKDDIQY 353
             +++       V+  +           +   D L      +E              I  
Sbjct: 261 -TNNSQLSGAGSVTLGDIPHYELDLLSEKLDLDSLLGVAAVKENNAPTVAVKPSAPVISN 319

Query: 354 SVNKKEEKDNSHDKENQENFSGDKMI 379
                + +D+      + +     +I
Sbjct: 320 EAEASKPEDSLQRFTARLSLQAASLI 345


>gi|24113448|ref|NP_707958.1| putative assembly protein [Shigella flexneri 2a str. 301]
 gi|30063513|ref|NP_837684.1| putative assembly protein [Shigella flexneri 2a str. 2457T]
 gi|24052476|gb|AAN43665.1| suppressor of ompF assembly mutants [Shigella flexneri 2a str. 301]
 gi|30041766|gb|AAP17493.1| suppressor of ompF assembly mutants [Shigella flexneri 2a str.
           2457T]
 gi|281601518|gb|ADA74502.1| Suppressor of ompF assembly mutants [Shigella flexneri 2002017]
 gi|332756791|gb|EGJ87136.1| protein asmA [Shigella flexneri 2747-71]
 gi|333002422|gb|EGK21984.1| protein asmA [Shigella flexneri K-218]
 gi|333002570|gb|EGK22131.1| protein asmA [Shigella flexneri VA-6]
 gi|333017152|gb|EGK36473.1| protein asmA [Shigella flexneri K-304]
          Length = 617

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQSQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|256022244|ref|ZP_05436109.1| putative assembly protein [Escherichia sp. 4_1_40B]
          Length = 617

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRINRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQVNWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEQPEWQLRLQFPQLNLDNLIPLNETANGENGTAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|300821830|ref|ZP_07101975.1| AsmA family protein [Escherichia coli MS 119-7]
 gi|300525672|gb|EFK46741.1| AsmA family protein [Escherichia coli MS 119-7]
          Length = 617

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRINRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQVNWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEQPEWQLRLQFPQLNLDNLIPLNETANGENGTAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|260868774|ref|YP_003235176.1| putative assembly protein AsmA [Escherichia coli O111:H- str.
           11128]
 gi|257765130|dbj|BAI36625.1| predicted assembly protein AsmA [Escherichia coli O111:H- str.
           11128]
 gi|323177038|gb|EFZ62628.1| protein asmA [Escherichia coli 1180]
          Length = 617

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDITSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|194431564|ref|ZP_03063856.1| AsmA protein [Shigella dysenteriae 1012]
 gi|194420389|gb|EDX36466.1| AsmA protein [Shigella dysenteriae 1012]
 gi|332091788|gb|EGI96867.1| protein asmA [Shigella dysenteriae 155-74]
          Length = 617

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP  +
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGMVDASDYPHDL 216

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                        I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 217 S----------AAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|110642274|ref|YP_670004.1| putative assembly protein [Escherichia coli 536]
 gi|191170191|ref|ZP_03031745.1| AsmA protein [Escherichia coli F11]
 gi|300981677|ref|ZP_07175663.1| AsmA family protein [Escherichia coli MS 200-1]
 gi|110343866|gb|ABG70103.1| protein AsmA precursor [Escherichia coli 536]
 gi|190909707|gb|EDV69292.1| AsmA protein [Escherichia coli F11]
 gi|300307478|gb|EFJ61998.1| AsmA family protein [Escherichia coli MS 200-1]
 gi|324013887|gb|EGB83106.1| AsmA family protein [Escherichia coli MS 60-1]
          Length = 617

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  +SL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTLSLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQVQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANDENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|323977776|gb|EGB72862.1| AsmA family protein [Escherichia coli TW10509]
          Length = 617

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/387 (12%), Positives = 122/387 (31%), Gaps = 51/387 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
               + +    + +V+  E+          +   D N     E    +N      +    
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLD-NLIPLKETANGENGAAQQGQSQST 318

Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379
                   + +    +  + F+ D ++
Sbjct: 319 LPRPVISSRIDEPAYQGLKGFAADILL 345


>gi|82543440|ref|YP_407387.1| assembly protein [Shigella boydii Sb227]
 gi|81244851|gb|ABB65559.1| suppressor of ompF assembly mutants [Shigella boydii Sb227]
 gi|320183704|gb|EFW58542.1| AsmA protein [Shigella flexneri CDC 796-83]
 gi|332097205|gb|EGJ02188.1| protein asmA [Shigella boydii 3594-74]
          Length = 617

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 119/391 (30%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRNYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF------Y 115
            S+    + +  +       + + + +    LPLLS ++ V  + +    +         
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEVV 120

Query: 116 LSSK---GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
            S        +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       +     +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIH---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|238753412|ref|ZP_04614775.1| hypothetical protein yruck0001_19390 [Yersinia ruckeri ATCC 29473]
 gi|238708365|gb|EEQ00720.1| hypothetical protein yruck0001_19390 [Yersinia ruckeri ATCC 29473]
          Length = 617

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/382 (13%), Positives = 123/382 (32%), Gaps = 49/382 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R+L  L  L  V++ G   + L ++  DFR    +Q       +++++G ++ H+ P 
Sbjct: 1   MKRLLTTLAILLVVLIAGMSALVLLVNPNDFRAYMVKQVEKKYSYQLSLEGDMRWHVWPR 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +      +     E + +  +  PLLS ++ V  + +    +     S+  
Sbjct: 61  LSIISGRMSLIAPGATTPVVSAENMRLDVKLWPLLSHQLAVKQVMLKGAVVRLTPDSEAQ 120

Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
           +             S+     ++ + K+ V    + I  + +D    + D+NL +     
Sbjct: 121 ALADAPVAPAGNTPSSERASWSLDIGKVQVVD-SLLIWQRANDDQINVRDINLLME---- 175

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                               G       +     N   ++  +SL   +    YP  I  
Sbjct: 176 -------------------QGPQHQVSVSLSSRVNRDQRDLTLSLAADVDMQRYPQQIMA 216

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                      I    + + G    +  +     +  L+ +++  D  + I +  + +  
Sbjct: 217 N----------ISQFSYKLEGADVPVGGI---VGQGALTASYQKEDARISIDKINISA-- 261

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-LNETDFFEEEEKKNKNDDLKKDDIQY 353
             +        + S  +               D L            +     ++  +  
Sbjct: 262 --NDNVLTGSLQASLGDLPDYRVDLQSDNLNLDKLFGWQAKMGNTDSSSPPSSRQQVVAA 319

Query: 354 SVNKKEEKDNSHDKENQENFSG 375
            V   ++ D   D ++  +F+G
Sbjct: 320 PVIANQDVDVGRDLQSLRDFTG 341


>gi|110806033|ref|YP_689553.1| putative assembly protein [Shigella flexneri 5 str. 8401]
 gi|110615581|gb|ABF04248.1| suppressor of ompF assembly mutants [Shigella flexneri 5 str. 8401]
          Length = 617

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQSQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|332092441|gb|EGI97514.1| protein asmA [Shigella boydii 5216-82]
          Length = 617

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP  +
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGMVDASDYPHDL 216

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                        I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 217 S----------AAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|293415353|ref|ZP_06657996.1| asmA protein [Escherichia coli B185]
 gi|291433001|gb|EFF05980.1| asmA protein [Escherichia coli B185]
          Length = 617

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPL+S ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLVSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|157267361|ref|NP_288572.2| putative assembly protein [Escherichia coli O157:H7 str. EDL933]
 gi|169822937|gb|AAG57126.2|AE005432_7 suppressor of ompF assembly mutants [Escherichia coli O157:H7 str.
           EDL933]
          Length = 617

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESRKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    JNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPJNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|300917105|ref|ZP_07133795.1| AsmA family protein [Escherichia coli MS 115-1]
 gi|300415624|gb|EFJ98934.1| AsmA family protein [Escherichia coli MS 115-1]
          Length = 617

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 122/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMGKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 ---------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       +     +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIH---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|91977829|ref|YP_570488.1| AsmA [Rhodopseudomonas palustris BisB5]
 gi|91684285|gb|ABE40587.1| AsmA [Rhodopseudomonas palustris BisB5]
          Length = 1308

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/306 (18%), Positives = 112/306 (36%), Gaps = 18/306 (5%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81
             P  IDW  FR+ FE +AT   G  + V G +   +LP P++  +D+ I    D     
Sbjct: 21  VGPYVIDWNQFRDQFEAEATRRAGAPVRVAGELDARLLPTPTLRLRDVTIGGAND-PGRI 79

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEK 141
           +   L +      L+ GE R   + ++   L+  L SKG  +W      +  +  + +++
Sbjct: 80  RAAKLDVEFSLGALMRGEWRADVLTVNGFALDLGLDSKGRLDWPAS--GLSNLAALSIDR 137

Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201
           +++  GRI + D  S     L D+                + +  GS+  +G    D+ R
Sbjct: 138 LNLT-GRIALHDAASRSTIELGDI-----------AFAGDLRAQGGSLRGDGNFLLDSTR 185

Query: 202 SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261
             F+++A          L I +      +  DL G L ++++ P + G   ++       
Sbjct: 186 YPFRLSAGRATDGDGTRLHITIDQAGRGMSADLDGLLAFDDRSPRFDGTAVLSASAVATN 245

Query: 262 NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321
                    R+S   K       + + +      + +        +      LL    + 
Sbjct: 246 PARTP---WRISAKVKAGPALAALDQLEASWGAEDRALRLAGSGDLRFGASPLLTAKLSA 302

Query: 322 AESMHD 327
            +   D
Sbjct: 303 RQLDGD 308


>gi|26248439|ref|NP_754479.1| putative assembly protein [Escherichia coli CFT073]
 gi|300978931|ref|ZP_07174444.1| AsmA family protein [Escherichia coli MS 45-1]
 gi|301048791|ref|ZP_07195789.1| AsmA family protein [Escherichia coli MS 185-1]
 gi|26108844|gb|AAN81047.1|AE016763_6 Protein asmA precursor [Escherichia coli CFT073]
 gi|300299376|gb|EFJ55761.1| AsmA family protein [Escherichia coli MS 185-1]
 gi|300409564|gb|EFJ93102.1| AsmA family protein [Escherichia coli MS 45-1]
 gi|315294414|gb|EFU53762.1| AsmA family protein [Escherichia coli MS 153-1]
          Length = 617

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  +SL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTLSLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQVQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|320193352|gb|EFW67990.1| AsmA protein [Escherichia coli WV_060327]
          Length = 617

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLMAAIEQINWQLQGADLPKQGIQ---GQGSFQVQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|331658144|ref|ZP_08359106.1| protein AsmA [Escherichia coli TA206]
 gi|222033830|emb|CAP76571.1| Protein asmA [Escherichia coli LF82]
 gi|312946687|gb|ADR27514.1| putative assembly protein [Escherichia coli O83:H1 str. NRG 857C]
 gi|331056392|gb|EGI28401.1| protein AsmA [Escherichia coli TA206]
          Length = 617

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  +SL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTLSLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQVQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|158426106|ref|YP_001527398.1| hypothetical protein AZC_4482 [Azorhizobium caulinodans ORS 571]
 gi|158332995|dbj|BAF90480.1| putative uncharacterized protein [Azorhizobium caulinodans ORS 571]
          Length = 1258

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 65/323 (20%), Positives = 121/323 (37%), Gaps = 22/323 (6%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64
           +LIGL     +V+  AF  P  +DWT FR  FE QA+ ++G  ++++GGI+  ILP P +
Sbjct: 12  LLIGLASAVILVISAAFAAPFVVDWTMFRATFEAQASRVIGLPVSIRGGIEADILPAPHL 71

Query: 65  FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124
              D+ +   ED +  + +  L        LL GE+   ++ + +P  +  L  KG    
Sbjct: 72  VLHDVVVGG-EDRTSSASMRTLKADLSLGALLRGEVEAPNVTLVRPLFSLVLDPKGR--- 127

Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
                   +     + +  ++ G + ++D+ +D+   L+DLNL+  AR           S
Sbjct: 128 -LAAPAGGVAAGASVGQFIIEQGTLALVDRGADRTVQLTDLNLKGEAR-----------S 175

Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
           + G    +G     ++R   +       +     L++       P  +DL G L      
Sbjct: 176 VSGPFRLDGDLKAGSERYQLRANLAKFGEEGG-KLRLIAEGRTQPFALDLDGTLRLVGDV 234

Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
           P + G  +++               +      + S   +     +L              
Sbjct: 235 PRFEGKGTLSRKGEAGAAEAWRLAAA-----VRASPEAIVADTLELTMAEDTRPAQLTGS 289

Query: 305 TKVSQDEENLLNFSENGAESMHD 327
            + S      L+   N      D
Sbjct: 290 ARFSLGRAIGLDAVLNARNLDLD 312


>gi|331673593|ref|ZP_08374356.1| protein AsmA [Escherichia coli TA280]
 gi|331068866|gb|EGI40258.1| protein AsmA [Escherichia coli TA280]
          Length = 617

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 51/366 (13%), Positives = 115/366 (31%), Gaps = 54/366 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQVNWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEQPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYS 354
                S
Sbjct: 320 PRPVIS 325


>gi|323968198|gb|EGB63607.1| AsmA family protein [Escherichia coli M863]
 gi|327253196|gb|EGE64850.1| protein asmA [Escherichia coli STEC_7v]
          Length = 617

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 50/387 (12%), Positives = 122/387 (31%), Gaps = 51/387 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
               + +    + +V+  E+          +   D N     E    +N      +    
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLD-NLIPLKETANGENGAAQQGQSQST 318

Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379
                   + +    +  + F+ D ++
Sbjct: 319 LPRPVISSRIDEPAYQGLQGFTADILL 345


>gi|331647716|ref|ZP_08348808.1| protein AsmA [Escherichia coli M605]
 gi|281179163|dbj|BAI55493.1| suppressor of ompF assembly mutants [Escherichia coli SE15]
 gi|330911901|gb|EGH40411.1| AsmA protein [Escherichia coli AA86]
 gi|331043440|gb|EGI15578.1| protein AsmA [Escherichia coli M605]
          Length = 617

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQVQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|307138720|ref|ZP_07498076.1| putative assembly protein [Escherichia coli H736]
 gi|331642680|ref|ZP_08343815.1| protein AsmA [Escherichia coli H736]
 gi|331039478|gb|EGI11698.1| protein AsmA [Escherichia coli H736]
          Length = 617

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQVNWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEQPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGLSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTTDILL 345


>gi|190575498|ref|YP_001973343.1| putative outer membrane protein assembly protein [Stenotrophomonas
           maltophilia K279a]
 gi|190013420|emb|CAQ47055.1| putative outer membrane protein assembly protein, AsmA family
           [Stenotrophomonas maltophilia K279a]
          Length = 657

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 41/365 (11%), Positives = 104/365 (28%), Gaps = 32/365 (8%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIE 84
            DW  F+   ER      G+ + + G + + +    ++    I             +  +
Sbjct: 45  WDWNWFKGPVERAVQARTGRVLHI-GNLDVDLGRTSTIRADAITFANASWAKQPEMASAD 103

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS-KGVSNWFQRKSTMDMIHNVILEKIH 143
            + +     PLL G +++ ++ + +P +    +  KG    +          +  L+++ 
Sbjct: 104 RVEIDVRVWPLLRGSVQLPEVRLTRPDVLLETAPRKGEPGNWDFLGDSAGGTSPQLKRLR 163

Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203
           +  GR++ ID        +                          ++ +G G++      
Sbjct: 164 IDDGRLQFIDALGRTDIRV-----------GVRSGQPKQADASPPLLVQGKGHWQGNPFT 212

Query: 204 FKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261
            +     P +  +     +I L            G L    +  ++   F+++G     L
Sbjct: 213 LRGGTESPLELTDSDHPFRIHLDGRVGATHAVASGTLTNPFQLRVFDLQFALSGQDLSDL 272

Query: 262 NLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN 316
              L           L G  K      R   +  +    +         +     +    
Sbjct: 273 YPLLGIAIPPSPPYALDGRLKRDHNVWRYDSFTGKVGDSD----LAGNLQFEVGRDRP-R 327

Query: 317 FSENGAESMHDLNETDFF-----EEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371
            +        D ++   F     +    +  N + K    + + + +   D  ++     
Sbjct: 328 LTATLESRRLDFDDLAGFVGAPPKTGGGETANAEQKAQAARIAASSRVLPDTPYNLGKLR 387

Query: 372 NFSGD 376
               D
Sbjct: 388 AMDAD 392


>gi|168750423|ref|ZP_02775445.1| AsmA protein [Escherichia coli O157:H7 str. EC4113]
 gi|168757966|ref|ZP_02782973.1| AsmA protein [Escherichia coli O157:H7 str. EC4401]
 gi|168769821|ref|ZP_02794828.1| AsmA protein [Escherichia coli O157:H7 str. EC4486]
 gi|168775483|ref|ZP_02800490.1| AsmA protein [Escherichia coli O157:H7 str. EC4196]
 gi|168782352|ref|ZP_02807359.1| AsmA protein [Escherichia coli O157:H7 str. EC4076]
 gi|168799050|ref|ZP_02824057.1| AsmA protein [Escherichia coli O157:H7 str. EC508]
 gi|208808009|ref|ZP_03250346.1| AsmA protein [Escherichia coli O157:H7 str. EC4206]
 gi|208817215|ref|ZP_03258307.1| AsmA protein [Escherichia coli O157:H7 str. EC4045]
 gi|208819146|ref|ZP_03259466.1| AsmA protein [Escherichia coli O157:H7 str. EC4042]
 gi|209395947|ref|YP_002271309.1| AsmA protein [Escherichia coli O157:H7 str. EC4115]
 gi|254793850|ref|YP_003078687.1| putative assembly protein [Escherichia coli O157:H7 str. TW14359]
 gi|187768968|gb|EDU32812.1| AsmA protein [Escherichia coli O157:H7 str. EC4196]
 gi|188015404|gb|EDU53526.1| AsmA protein [Escherichia coli O157:H7 str. EC4113]
 gi|189000197|gb|EDU69183.1| AsmA protein [Escherichia coli O157:H7 str. EC4076]
 gi|189355118|gb|EDU73537.1| AsmA protein [Escherichia coli O157:H7 str. EC4401]
 gi|189361201|gb|EDU79620.1| AsmA protein [Escherichia coli O157:H7 str. EC4486]
 gi|189378507|gb|EDU96923.1| AsmA protein [Escherichia coli O157:H7 str. EC508]
 gi|208727810|gb|EDZ77411.1| AsmA protein [Escherichia coli O157:H7 str. EC4206]
 gi|208730834|gb|EDZ79524.1| AsmA protein [Escherichia coli O157:H7 str. EC4045]
 gi|208739269|gb|EDZ86951.1| AsmA protein [Escherichia coli O157:H7 str. EC4042]
 gi|209157347|gb|ACI34780.1| AsmA protein [Escherichia coli O157:H7 str. EC4115]
 gi|209748016|gb|ACI72315.1| suppressor of ompF assembly mutants [Escherichia coli]
 gi|209748018|gb|ACI72316.1| suppressor of ompF assembly mutants [Escherichia coli]
 gi|254593250|gb|ACT72611.1| predicted assembly protein [Escherichia coli O157:H7 str. TW14359]
 gi|326347054|gb|EGD70787.1| AsmA protein [Escherichia coli O157:H7 str. 1125]
          Length = 617

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESRKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|15832125|ref|NP_310898.1| assembly protein [Escherichia coli O157:H7 str. Sakai]
 gi|168761810|ref|ZP_02786817.1| AsmA protein [Escherichia coli O157:H7 str. EC4501]
 gi|168788737|ref|ZP_02813744.1| AsmA protein [Escherichia coli O157:H7 str. EC869]
 gi|217329631|ref|ZP_03445710.1| AsmA protein [Escherichia coli O157:H7 str. TW14588]
 gi|261225087|ref|ZP_05939368.1| putative assembly protein [Escherichia coli O157:H7 str. FRIK2000]
 gi|261257567|ref|ZP_05950100.1| putative assembly protein [Escherichia coli O157:H7 str. FRIK966]
 gi|13362340|dbj|BAB36294.1| suppressor of ompF assembly mutants [Escherichia coli O157:H7 str.
           Sakai]
 gi|189367820|gb|EDU86236.1| AsmA protein [Escherichia coli O157:H7 str. EC4501]
 gi|189371540|gb|EDU89956.1| AsmA protein [Escherichia coli O157:H7 str. EC869]
 gi|209748014|gb|ACI72314.1| suppressor of ompF assembly mutants [Escherichia coli]
 gi|217317399|gb|EEC25828.1| AsmA protein [Escherichia coli O157:H7 str. TW14588]
 gi|320191767|gb|EFW66415.1| AsmA protein [Escherichia coli O157:H7 str. EC1212]
 gi|320641362|gb|EFX10817.1| putative assembly protein [Escherichia coli O157:H7 str. G5101]
 gi|320668092|gb|EFX34971.1| putative assembly protein [Escherichia coli O157:H7 str. LSU-61]
 gi|326338423|gb|EGD62251.1| AsmA protein [Escherichia coli O157:H7 str. 1044]
          Length = 617

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESRKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|306814812|ref|ZP_07448974.1| putative assembly protein [Escherichia coli NC101]
 gi|305852206|gb|EFM52658.1| putative assembly protein [Escherichia coli NC101]
 gi|324006457|gb|EGB75676.1| AsmA family protein [Escherichia coli MS 57-2]
          Length = 617

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLMAAIEQINWQLQGADLPKQGIQ---GQGSFQVQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|56478298|ref|YP_159887.1| hypothetical protein ebA5035 [Aromatoleum aromaticum EbN1]
 gi|56314341|emb|CAI08986.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 662

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 47/372 (12%), Positives = 105/372 (28%), Gaps = 26/372 (6%)

Query: 2   LR--RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI- 58
           ++  RVL G+G     ++       L  D    R    RQ T   G+++ + G + I   
Sbjct: 1   MKSGRVLKGIGVTVLGLIALIVLAALLFDPNWLRGPIMRQTTEKTGRELVINGDLSIDWG 60

Query: 59  LPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
            P   +    +     E          E +S+      L    + + ++ +D+       
Sbjct: 61  WPVTRLGAAGVTFANPEWAEEPQMFTAENISVGVSLPQLFRRVVMLPEITLDRVDAFLEQ 120

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
              G  NW   +   D    V + ++ +  GRI+  D         +      S    + 
Sbjct: 121 HPDGRKNWLLDREQKDEGARVGIGRLALHDGRIRYADPAQKTRIDATLSTTGGSGERGSD 180

Query: 177 ISP--------LSIDSIKGSVIAEGTGNFDNKRSAFKITANF--PAKNKAISLKIQLFPL 226
            +               +  +  E  G +  +    + T       +++     + +   
Sbjct: 181 SAADPKPEADVPPATEAESGIRFEAKGQYKGRPMNARGTGGPVLALRDEETPYPLDVQAQ 240

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDG 281
                +   GN+    K    +    + G     L   +          R +G+   +  
Sbjct: 241 FGDTAVKADGNITSLLKLSAINLDVDLRGASIADLYRLIGIALPETPPYRTAGHLIRNGT 300

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEE-NLLNFSENGAESMH-DLNETDFFEEEEK 339
             R   +       +         +V+   E   L+   +       DL      +E   
Sbjct: 301 VWRYENFSGAIGKSD----VAGTLQVATGGERPSLHGDLSFKLLDFADLGPLVGAKEAPV 356

Query: 340 KNKNDDLKKDDI 351
           ++++        
Sbjct: 357 ESEDAAPDAPAP 368


>gi|323187792|gb|EFZ73090.1| protein asmA [Escherichia coli RN587/1]
          Length = 617

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 49/387 (12%), Positives = 122/387 (31%), Gaps = 51/387 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQVNWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
               + +    + +++  E+          +   D N     E    +N      +    
Sbjct: 264 ----NDSTLSGQAQITLTEKPEWQLRLQFPQLNLD-NLIPLKETANGENGAAQQGQSQST 318

Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379
                   + +    +  + F+ D ++
Sbjct: 319 LPRPVISSRIDEPAYQGLQGFTADILL 345


>gi|300947788|ref|ZP_07161945.1| AsmA family protein [Escherichia coli MS 116-1]
 gi|300452634|gb|EFK16254.1| AsmA family protein [Escherichia coli MS 116-1]
          Length = 617

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLMAAIEQINWQLQGADLPKQGIQ---GQGSFQVQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGLSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|300902294|ref|ZP_07120290.1| AsmA family protein [Escherichia coli MS 84-1]
 gi|301304500|ref|ZP_07210611.1| AsmA family protein [Escherichia coli MS 124-1]
 gi|301647991|ref|ZP_07247764.1| AsmA family protein [Escherichia coli MS 146-1]
 gi|300405603|gb|EFJ89141.1| AsmA family protein [Escherichia coli MS 84-1]
 gi|300840226|gb|EFK67986.1| AsmA family protein [Escherichia coli MS 124-1]
 gi|301073892|gb|EFK88698.1| AsmA family protein [Escherichia coli MS 146-1]
 gi|315255426|gb|EFU35394.1| AsmA family protein [Escherichia coli MS 85-1]
 gi|323940866|gb|EGB37054.1| AsmA family protein [Escherichia coli E482]
          Length = 617

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLMAAIEQINWQLQGADLPKQGIQ---GQGSFQVQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGLSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|333003407|gb|EGK22951.1| protein asmA [Shigella flexneri K-272]
 gi|333017237|gb|EGK36557.1| protein asmA [Shigella flexneri K-227]
          Length = 617

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 122/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 ---------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L  
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQSQWQESHKRLSFNQISL-- 261

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 262 --IANDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|320646732|gb|EFX15619.1| putative assembly protein [Escherichia coli O157:H- str. 493-89]
 gi|320652009|gb|EFX20362.1| putative assembly protein [Escherichia coli O157:H- str. H 2687]
          Length = 617

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESRKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|157161555|ref|YP_001458873.1| putative assembly protein [Escherichia coli HS]
 gi|157067235|gb|ABV06490.1| AsmA protein [Escherichia coli HS]
          Length = 617

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLMAAIEQINWQLQGADLPKQGIQ---GQGSFQVQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLISLNETANGENGAAQQGLSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|284922059|emb|CBG35137.1| putative outer membrane assembly protein [Escherichia coli 042]
          Length = 617

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVTGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQVNWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEQPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|300692202|ref|YP_003753197.1| outer membrane biogenesis protein, AsmA family [Ralstonia
           solanacearum PSI07]
 gi|299079262|emb|CBJ51934.1| putative outer membrane biogenesis protein, AsmA family [Ralstonia
           solanacearum PSI07]
          Length = 750

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/429 (13%), Positives = 117/429 (27%), Gaps = 60/429 (13%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58
           RV +GL     V++  A    L  DW+  +       +  +G+  A+ G + +       
Sbjct: 6   RVTLGLVITPVVIVAAAIVFVLTFDWSRAKPYLNDHVSQAIGRPFAINGDLVLTWKTPEG 65

Query: 59  -------LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P +   DI I           + ++ L+   E LPLL+  I +  + +D 
Sbjct: 66  ESGWRAYVPWPRLIASDITIGNPGWTRQPHVATVQRLTFVLEALPLLAHRIVIPSVTLDT 125

Query: 110 PHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVKGGRIKIIDQE-----SDQVYF 161
           P +      +  +NW        +      + L +I    G +++ D+      +  +  
Sbjct: 126 PVVALERDPQNRNNWTFNFGAPDSKPSDWKLELREIAFSKGSVQVDDEVKRVHLAATIDT 185

Query: 162 LSDLNLQISARFLNIISP-----------------------LSIDSIKGSVIAEGTGNFD 198
           + +  L  +A    I                           +       +     G ++
Sbjct: 186 VDNQTLYTAANGTAIRGSEQPPVVPTASGAAASGATAKAPLAADPQQPYGITWTVKGTYN 245

Query: 199 NKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGD 256
           N        A    +  +      +Q         IDL G L              ++G 
Sbjct: 246 NAAIHGSGKAGGVLRLQDAHRPYPLQADVTVGKTRIDLAGTLTNPASLTALDLRLHLSGA 305

Query: 257 FSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
               L                  RL G  +    + R  ++  +    +           
Sbjct: 306 SMAHLYPLTGVVLPDTPPFDTRGRLIGELRRQGSSWRYEKFTGRVGSSD----LGGTLTF 361

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
           +   E       +G    H L   D        +     ++D+       K         
Sbjct: 362 AMRPEPGQRPQLSGELVSHQLLFADLAPIIGADSNASKQRRDEPVRQPADKVLPVEPFRT 421

Query: 368 ENQENFSGD 376
           +       D
Sbjct: 422 DRWNAIDAD 430


>gi|301021263|ref|ZP_07185294.1| AsmA family protein [Escherichia coli MS 69-1]
 gi|300398189|gb|EFJ81727.1| AsmA family protein [Escherichia coli MS 69-1]
          Length = 617

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 49/387 (12%), Positives = 122/387 (31%), Gaps = 51/387 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + +    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKMADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
               + +    + +V+  E+          +   D N     E    +N      +    
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLD-NLIPLKETANGENGAAQQGQSQST 318

Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379
                   + +    +  + F+ D ++
Sbjct: 319 LPRPVISSRIDEPAYQGLQGFTADILL 345


>gi|238785444|ref|ZP_04629429.1| hypothetical protein yberc0001_16760 [Yersinia bercovieri ATCC
           43970]
 gi|238713649|gb|EEQ05676.1| hypothetical protein yberc0001_16760 [Yersinia bercovieri ATCC
           43970]
          Length = 612

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 43/387 (11%), Positives = 113/387 (29%), Gaps = 53/387 (13%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64
           +L  L  L  V++ G   + L ++  DFR    +Q     G  + ++G ++ H+ P  S+
Sbjct: 1   MLTTLIILLVVIVAGMSALVLLVNPNDFRAYMVKQVEKKSGYHLQLEGDLRWHVWPQLSI 60

Query: 65  FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124
                 +      +     E + +  +  PLLS ++ V  + +    +     S+     
Sbjct: 61  IVGRTALTAPGATAPIVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLTPDSEAQQQP 120

Query: 125 FQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
                              + + K+ +    +     ++DQ   + DLNL++        
Sbjct: 121 GAPVAPSGSAPLNEHRAWKLDINKVQIADSLLIWQRTDNDQ-VNVRDLNLELKQDDQR-- 177

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
                                          N   ++   S+        YP        
Sbjct: 178 ---------------------QVHITLSSRVNRNQRDVTFSMVADADMRHYPQQFSAN-- 214

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297
                   I    + + G    +  +     +  L  +++     + +++    +    +
Sbjct: 215 --------ISQFAYKLEGADIPVGGVS---GEGTLQASYQSDIQQLLLNQLSFSA----N 259

Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHD-----LNETDFFEEEEKKNKNDDLKKDDIQ 352
           +       K +  +      +        D      +++    ++  K          IQ
Sbjct: 260 NNQLTGSAKATLGDIPDYTINLAADNLNLDTIFGWESKSAAVSKDAGKQSTVTAPVIAIQ 319

Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379
              +  ++  +  D   Q + + + ++
Sbjct: 320 ADEDVGQDLQSLRDFNAQISLTANNLV 346


>gi|260769033|ref|ZP_05877967.1| AsmA protein [Vibrio furnissii CIP 102972]
 gi|260617063|gb|EEX42248.1| AsmA protein [Vibrio furnissii CIP 102972]
          Length = 704

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/440 (12%), Positives = 128/440 (29%), Gaps = 71/440 (16%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ + +  L  VVL     + + ++   F+     Q     G  + ++G I     P 
Sbjct: 1   MKKLFLFVAALLIVVLGAIAALVILVNPNQFKPLLVEQTKKQTGLDLVIEGDIGWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +            K++ + +    +PL   ++++ ++ +D   ++      
Sbjct: 61  IGFELGKTELKNPSGFSSPNLFKVDSVGIDVSVMPLFDKQLQIGNIRLDGAEVHLETLKD 120

Query: 120 GVSNWFQR--------------------------KSTMDMIHNVILEKIHVKGGRIKIID 153
           G SN                               ++     ++ L  + +    ++I D
Sbjct: 121 GRSNLDSLTKAQASTQSNDAKETAPAAETPTANDSASAAQDWSINLAGVSINNALLEIQD 180

Query: 154 QESDQVYFLSDLNLQISAR----FLNIISPLSIDSIKGSVIAEGTGNFDNKR-------- 201
           +++     L D+ LQ+S      +  +       + +    A G       +        
Sbjct: 181 RKAGTQTKLYDVQLQVSEFAADAWTRVDFAAKGSNNQQQFGASGNAEIKLSKDFKQYALR 240

Query: 202 ---------------SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
                           + K+T      +KA +L       A  + +D  G+      Q I
Sbjct: 241 NITLDANFSDPSTRIDSAKLTLATFEFDKANALTFSAKGTASQMKLDANGSASVTVDQAI 300

Query: 247 YSGVFSVAG--DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
                             L  S  K  +  +         +S   L  +  N+    D K
Sbjct: 301 SHVSVEKLDLTANLDGAALPQSPMKVTMQSSVAFDMTKNALS-VVLDKLTANA-LQFDGK 358

Query: 305 TKVSQDEENLLNFSENGAESMHD----LNETDFFEEE--------EKKNKNDDLKKDDIQ 352
             V   +   + F+ +  +   D    LN++    E          K + +    + D+ 
Sbjct: 359 ANVVLGDIPKVRFNLHSPDIDLDEFLGLNQSTATAESKPAAGGSAGKSSSDKAEVEPDLS 418

Query: 353 YSVNKKEEKDNSHDKENQEN 372
                    D + DK    N
Sbjct: 419 ALKTLDVAGDIAIDKFKASN 438


>gi|191168859|ref|ZP_03030632.1| AsmA protein [Escherichia coli B7A]
 gi|190901098|gb|EDV60874.1| AsmA protein [Escherichia coli B7A]
          Length = 617

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFFGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|82777425|ref|YP_403774.1| putative assembly protein [Shigella dysenteriae Sd197]
 gi|81241573|gb|ABB62283.1| suppressor of ompF assembly mutants [Shigella dysenteriae Sd197]
          Length = 617

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 53/391 (13%), Positives = 122/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGWVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++     +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQELHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|323698506|ref|ZP_08110418.1| AsmA family protein [Desulfovibrio sp. ND132]
 gi|323458438|gb|EGB14303.1| AsmA family protein [Desulfovibrio desulfuricans ND132]
          Length = 719

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 62/404 (15%), Positives = 118/404 (29%), Gaps = 66/404 (16%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  LIGLG    + ++ A       D  D++    +      G+ +   G I +   P 
Sbjct: 5   LKFGLIGLGVCLVLFVISAVIFAAVFDPNDYKGRISQAVLKETGRTLTFDGDISLTFFPG 64

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V    + +   E    +  + +    +    LPLL G++R   + +D P LN     K
Sbjct: 65  LGVTLGGLSLSNAEGFGPAPMASVRSARVTVRLLPLLMGKVRFNRLELDGPVLNLGRDEK 124

Query: 120 GVSNWFQRKSTMDM--------------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
           G +NW                         ++ +  + V+ G +   D++SD  + L  L
Sbjct: 125 GGANWDDLVGREPDKADKADQDEDAGSGTFDLDVAGVAVRNGSLSWDDRKSDTRFLLRGL 184

Query: 166 NLQISARFLNIISPLSIDSI--------KGSVIAEGTGNFD---------NKRSAFKIT- 207
           ++   A     + P+ +           KG++  EG  + D         +  +  K T 
Sbjct: 185 DVTTGAISKGGLFPVKLSVNFDCSKPDAKGALTLEGKSSIDLASRQYGHMDVHATVKATG 244

Query: 208 ANFPAKNKAISLKIQLFPLA---------------YPIIIDLFGNLF-WNEKQPIYSGVF 251
           A  P       L  Q   L                Y   +   G +    +     +   
Sbjct: 245 AAIPGGVLDGKLNFQFLALDFNKETAQVTGLECTAYGATLLADGTIRGLTDGLKAATASL 304

Query: 252 SVAGDFSKLLNLELSAKKSRL-----------SGNFKISDGNVRISRYKLQSILPNSSTD 300
           ++     + +   L A                +       G + +   +L          
Sbjct: 305 TLQPADLRTVFAALGAPAPNTADPKALTEVGGTAKVNFKTGRLALDDVELSV----DGCR 360

Query: 301 EDNKTKVSQDEE-NLLNFSENGAESMHDLNETDFFEEEEKKNKN 343
              K  V +      +    +  E   D        E E   + 
Sbjct: 361 IVGKGTVERGRAWPRITAQVDAGEVDLDRYLPPKHGENEGAAQE 404


>gi|227887120|ref|ZP_04004925.1| assembly protein [Escherichia coli 83972]
 gi|227835470|gb|EEJ45936.1| assembly protein [Escherichia coli 83972]
 gi|307554138|gb|ADN46913.1| suppressor of OmpF assembly mutants [Escherichia coli ABU 83972]
          Length = 617

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 49/387 (12%), Positives = 121/387 (31%), Gaps = 51/387 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + +    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKMADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
               + +    + +V+  E+          +   D N     E    +N      +    
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLD-NLIPLKETANGENGAAQQGQSQST 318

Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379
                   + +    +    F+ D ++
Sbjct: 319 LPRPVISSRIDEPAYQGLHGFTADILL 345


>gi|91211353|ref|YP_541339.1| putative assembly protein [Escherichia coli UTI89]
 gi|117624261|ref|YP_853174.1| putative assembly protein [Escherichia coli APEC O1]
 gi|218558945|ref|YP_002391858.1| assembly protein [Escherichia coli S88]
 gi|237704521|ref|ZP_04535002.1| AsmA protein [Escherichia sp. 3_2_53FAA]
 gi|91072927|gb|ABE07808.1| AsmA suppressor of OmpF assembly mutants [Escherichia coli UTI89]
 gi|115513385|gb|ABJ01460.1| AsmA suppressor of OmpF assembly mutants [Escherichia coli APEC O1]
 gi|218365714|emb|CAR03450.1| putative inner membrane protein involved in outer membrane protein
           assembly [Escherichia coli S88]
 gi|226900887|gb|EEH87146.1| AsmA protein [Escherichia sp. 3_2_53FAA]
 gi|294491130|gb|ADE89886.1| AsmA protein [Escherichia coli IHE3034]
 gi|307626389|gb|ADN70693.1| putative assembly protein [Escherichia coli UM146]
 gi|315285660|gb|EFU45102.1| AsmA family protein [Escherichia coli MS 110-3]
 gi|323951818|gb|EGB47692.1| AsmA family protein [Escherichia coli H252]
 gi|323956100|gb|EGB51852.1| AsmA family protein [Escherichia coli H263]
          Length = 617

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 49/387 (12%), Positives = 121/387 (31%), Gaps = 51/387 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + +    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKMADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
               + +    + +V+  E+          +   D N     E    +N      +    
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLD-NLIPLKETANGENGAAQQGQSQST 318

Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379
                   + +    +    F+ D ++
Sbjct: 319 LPRPVISSRIDEPAYQGLHGFTADILL 345


>gi|307312371|ref|ZP_07592005.1| AsmA family protein [Escherichia coli W]
 gi|306907542|gb|EFN38045.1| AsmA family protein [Escherichia coli W]
 gi|315061339|gb|ADT75666.1| putative assembly protein [Escherichia coli W]
 gi|323378081|gb|ADX50349.1| AsmA family protein [Escherichia coli KO11]
          Length = 617

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESYKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEQPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|300936630|ref|ZP_07151534.1| AsmA family protein [Escherichia coli MS 21-1]
 gi|300458211|gb|EFK21704.1| AsmA family protein [Escherichia coli MS 21-1]
          Length = 617

 Score =  150 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 49/387 (12%), Positives = 121/387 (31%), Gaps = 51/387 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + +    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKMADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
               + +    + +V+  E+          +   D N     E    +N      +    
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLD-NLIPLKETANGENGAAQQGQSQST 318

Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379
                   + +    +    F+ D ++
Sbjct: 319 LPRPVISSRIDEPAYQGLHGFTADILL 345


>gi|271499797|ref|YP_003332822.1| AsmA family protein [Dickeya dadantii Ech586]
 gi|270343352|gb|ACZ76117.1| AsmA family protein [Dickeya dadantii Ech586]
          Length = 604

 Score =  150 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 41/327 (12%), Positives = 105/327 (32%), Gaps = 48/327 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+   L  L  V+  G   + + I+  DFR    RQ  +  G ++ + G ++ H+ P 
Sbjct: 1   MRRLFTTLVILLVVLAAGMTALVVLINPNDFRAYMVRQVEMRTGYRLNLDGELRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+   ++ +      +     E + +  +  PLLS ++ V  + +    +     S+  
Sbjct: 61  LSILSGNLSVSAPGAATPVINAENMRLDVKLWPLLSHKLEVKQVMLKGAVIRLTPDSEAR 120

Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                            D   +  + ++ V    +    + +     + D+NL + +   
Sbjct: 121 QASPAPIAPAGPSAPEADTPWHFDINQVEVADSVLVF-QRGNAPALNVRDINLTMRSDAS 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                     + +     N   ++ + SL   L    YP  +  
Sbjct: 180 R-----------------------QVQVSLSSRFNRDQRDLSFSLDAVLDMQNYPQQVAA 216

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                      I S  + + G        +  + K  + G+++     + ++++ L +  
Sbjct: 217 D----------ISSVSYQLQGAGLP---ADGISGKGTIRGSYQRQPEKLTVNQFALSA-- 261

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENG 321
             +++  +     +         +   
Sbjct: 262 --NNSQLNGALSATFGTVPEYVLTLQS 286


>gi|218699342|ref|YP_002406971.1| putative assembly protein [Escherichia coli IAI39]
 gi|218369328|emb|CAR17086.1| putative inner membrane protein involved in outer membrane protein
           assembly [Escherichia coli IAI39]
          Length = 617

 Score =  150 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 49/387 (12%), Positives = 121/387 (31%), Gaps = 51/387 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + +    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKMADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
               + +    + +V+  E+          +   D N     E    +N      +    
Sbjct: 264 ----NDSTLSGQAQVTLTEKPEWQLRLQFPQLNLD-NLIPLKETANGENGAAQQGQSQST 318

Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379
                   + +    +    F+ D ++
Sbjct: 319 LPRPVISLRIDEPAYQGLHGFTADILL 345


>gi|218549481|ref|YP_002383272.1| assembly protein [Escherichia fergusonii ATCC 35469]
 gi|218357022|emb|CAQ89653.1| putative inner membrane protein involved in outer membrane protein
           assembly [Escherichia fergusonii ATCC 35469]
 gi|324114263|gb|EGC08235.1| AsmA family protein [Escherichia fergusonii B253]
          Length = 617

 Score =  150 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 48/387 (12%), Positives = 123/387 (31%), Gaps = 51/387 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+      +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRTILTAQGASQPLVRADNMRLDVALWPLLSHQLSVKQVMLKGAVIQLTPETEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +     +  D   +  +  + V    +     E D+   + D+ LQ+   
Sbjct: 121 RSEDAPVAPKDNTLPDNAEDRGWSFDIASLRVSDSVLVF-QHEDDEQVTVRDIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++ ++SLK  +    YP  +
Sbjct: 180 SQHRGS-----------------------FEFSGRVNRDQRDLSLSLKGTVDASDYPHDL 216

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                             + + G       ++      +    ++ +   +   +  L +
Sbjct: 217 TADIQ----------QIDWQLQGADLPKQGIQGHG---QFRAQWQEAQKRLSFEQINLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
               + ++   + +V+  E+         A+   D N     +    +N      ++   
Sbjct: 264 ----NDSNLTGQAQVALLEKPEWLLRLQFAQLNLD-NLLPMNDVMTTQNGVAQQGQNQPT 318

Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379
                   + +    +  + F+ D ++
Sbjct: 319 LPRPVISSRIDEPAYQGLKGFAADILL 345


>gi|315180772|gb|ADT87686.1| asmA protein [Vibrio furnissii NCTC 11218]
          Length = 704

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 56/440 (12%), Positives = 127/440 (28%), Gaps = 71/440 (16%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ + +  L  VVL     + + ++   F+     Q     G  + ++G I     P 
Sbjct: 1   MKKLFLFVAALLIVVLGAIAALVVLVNPNQFKPLLVEQTKKQTGLDLVIEGDIGWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +            K++ + +    +PL   ++++ ++ +D   ++      
Sbjct: 61  IGFELGKTELKNPSGFSSPNLFKVDSVGIDVSVMPLFDKQLQIGNIRLDGAEVHLETLRD 120

Query: 120 GVSNWFQR--------------------------KSTMDMIHNVILEKIHVKGGRIKIID 153
           G SN                               ++     ++ L  + +    ++I D
Sbjct: 121 GRSNLDSLTKAQTSTPSNDAKETAPAAETPTANDSASAAQDWSINLAGVSINNALLEIQD 180

Query: 154 QESDQVYFLSDLNLQISAR----FLNIISPLSIDSIKGSVIAEGTGNFDNKR-------- 201
           +++     L D+ LQ+S      +  +       + +    A G       +        
Sbjct: 181 RKAGTQTKLYDVQLQVSEFAADAWTRVDFAAKGSNNQQQFGASGNAEIKLSKDFKQYALR 240

Query: 202 ---------------SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
                           + K+       +KA +L       A  + +D  G+      Q I
Sbjct: 241 NITLDANFSDPSTRIDSAKLALATFEFDKANALTFSAKGTASQMKLDANGSASVTVDQAI 300

Query: 247 YSGVFSVAG--DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
                             L  S  K  +  +         +S   L  +  N+    D K
Sbjct: 301 SHVSVEKLDLTANLDGAALPQSPMKVTMQSSVAFDMTKNALS-VVLDKLTANA-LQFDGK 358

Query: 305 TKVSQDEENLLNFSENGAESMHD----LNETDFFEEE--------EKKNKNDDLKKDDIQ 352
             V   +   + F+ +  +   D    LN++    E          K + +    + D+ 
Sbjct: 359 ANVVLGDIPKVRFNLHSPDIDLDEFLGLNQSTATAESKPAAGGSAGKSSSDKAEVEPDLS 418

Query: 353 YSVNKKEEKDNSHDKENQEN 372
                    D + DK    N
Sbjct: 419 ALKTLDVAGDIAIDKFKASN 438


>gi|239817230|ref|YP_002946140.1| AsmA family protein [Variovorax paradoxus S110]
 gi|239803807|gb|ACS20874.1| AsmA family protein [Variovorax paradoxus S110]
          Length = 669

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 56/382 (14%), Positives = 115/382 (30%), Gaps = 43/382 (11%)

Query: 21  FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKD 68
             V L  DW   R    ++ +   G+  A++G + +              +P+P +  +D
Sbjct: 25  IAVLLSFDWNRARPWINQRVSEATGRPFAIRGDLALQWSSPEAETGWRRWVPWPRLSAQD 84

Query: 69  IRIDQKEDGSF---ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW- 124
           I +   + G      ++I  L+     LPLL+  IR+  + +  P L+   +++G +NW 
Sbjct: 85  ITLGNADWGKTGPHLAEIRQLTFSLNPLPLLNHTIRIPTLELAGPVLSLERTAEGKNNWT 144

Query: 125 -FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                        + L+++ +  G +K+ D  +     +           ++ +   S +
Sbjct: 145 LAAGGGAEPSSWKLDLQRLVLSQGTVKLADATARLDLKVD----------IDSLPAESAE 194

Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243
                    GT      + + K  A    +       +Q         ID+ G L   + 
Sbjct: 195 GYGIGWKLGGTFRQTPVQGSGKAGAVLSLQQDTKPYPLQAGVQVGATRIDIAGTLTKPDA 254

Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFKISDGNVRISRYKLQSIL 294
                    ++G     L                   L G    + G      +K +   
Sbjct: 255 LAALDLRLKLSGASMAHLYPITGITLPNTPPFSTEGHLVGKLDKAGGRWLYENFKGRVGA 314

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354
            + +   +    VSQ    LL       +   +    D        +     K+      
Sbjct: 315 SDIAGTLE---YVSQQPRPLLRGQVQSNQLRLE----DLAPLIGADSNASKAKRGAPAVQ 367

Query: 355 VNKKEEKDNSHDKENQENFSGD 376
              K       D  +  +   D
Sbjct: 368 PAGKVLPVEKFDTASWGSIDAD 389


>gi|325497885|gb|EGC95744.1| putative assembly protein [Escherichia fergusonii ECD227]
          Length = 617

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 124/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQINWQLQGADLPKQGIQ---GQGSFQAQWQESYKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E +  +        
Sbjct: 264 ----NDSTLSGQAQVTLTEQPEWQLRLQFPQLNLDNLIPLNETANGENDAAQQGQSQSTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|229523174|ref|ZP_04412581.1| AsmA protein [Vibrio cholerae TM 11079-80]
 gi|229339537|gb|EEO04552.1| AsmA protein [Vibrio cholerae TM 11079-80]
          Length = 749

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 58/432 (13%), Positives = 128/432 (29%), Gaps = 56/432 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ I L  L  +++     + L ++   F+     QA    G  + ++G I     P 
Sbjct: 47  MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 106

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL  ++++ ++ +D    +      
Sbjct: 107 IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 166

Query: 120 GVSNWF-----------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQES 156
           G SN                            S      ++ L  + V    ++I D+++
Sbjct: 167 GRSNLDALTQAQSKPASTPATTEPAPASQPSSSEPTAAWSIELGGVSVSNAVLEITDKKA 226

Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197
                L D+ L     +   +         D  +    A+G                   
Sbjct: 227 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 286

Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    N+  + K+  +    +KA +L   +   A  + ++  G+      Q I   
Sbjct: 287 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAAEMKLNAQGSASLMVNQAISKV 346

Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                      +   L  S  K  L            +S   L  +  N+    D K  V
Sbjct: 347 GLDALKLQAELEGTALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 404

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
           +  +   + F+ +  +   D       +E +     +         + N   E +     
Sbjct: 405 TLADIPKVRFNLHSPDIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSA 464

Query: 368 ENQENFSGDKMI 379
            N  + +G+  I
Sbjct: 465 LNALDVAGEISI 476


>gi|302381772|ref|YP_003817595.1| AsmA family protein [Brevundimonas subvibrioides ATCC 15264]
 gi|302192400|gb|ADK99971.1| AsmA family protein [Brevundimonas subvibrioides ATCC 15264]
          Length = 686

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 47/361 (13%), Positives = 109/361 (30%), Gaps = 30/361 (8%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65
                +  V++       L  DW   R    R A+    +++A++G + + +  + PSV 
Sbjct: 51  KIAASVVLVLIAAIVIFLLLFDWNWLRGPIGRWASAKYDREVALQGDLDVRLFSWTPSVI 110

Query: 66  FKDIRIDQKEDGSFE--SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
             D++       +    + +E +  +     L  G++ +  + I +P +    +  G  +
Sbjct: 111 VNDLKFGGPSWATEADTANVERIEAQFRLRKLFVGQVEMPLLSITRPRVVLIATEDGRQS 170

Query: 124 WFQRKSTMDMIHNVI---LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
           W       D         + ++ +  GR+ + +Q           +L + A      +  
Sbjct: 171 WDLEPDKPDDGEGAKLPLINRLVITDGRLSVDEQRR---------DLTLEAAVTAQEAAS 221

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLF 239
             D   G  + EG G+ +      KI         +      +         +   G + 
Sbjct: 222 DADGQSG-FVLEGEGSINGSPLTLKIEGGPFINIRRNRPYGFKATLAGAGSRLVADGAIT 280

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSIL 294
                  ++   S+ G     L L            RL+G     D     + +  +   
Sbjct: 281 RPFDLGQFTSTLSLQGQNLNDLYLLTGVTLPNTPAYRLAGALTRDDNIWTFNDFSGRVGA 340

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354
            +     +   +V       ++ + +      D    D       + + +    D    S
Sbjct: 341 SD----LEGDVRVQGGGRLKVDATLSSQRLDID----DLTTILGGRAQTNAAGTDTTTIS 392

Query: 355 V 355
            
Sbjct: 393 T 393


>gi|170769724|ref|ZP_02904177.1| AsmA protein [Escherichia albertii TW07627]
 gi|170121338|gb|EDS90269.1| AsmA protein [Escherichia albertii TW07627]
          Length = 617

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 51/391 (13%), Positives = 121/391 (30%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF------Y 115
            S+    + +          + + + +    +PLLS ++ V  + +    +         
Sbjct: 61  LSILSGRMSLTAPGASQPLVRADNMRLDVALMPLLSHQLNVQQVMLKGAVIQLTPQTKEV 120

Query: 116 LSSK---GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + +++LQ+   
Sbjct: 121 RDENAPIAPRDNTLPDLSEDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIHLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++ ++SLK  +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLSLSLKGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    +    + V G       ++    +      +  +   +  ++  L +
Sbjct: 214 -------HDLTAVVEQITWQVQGADLPKQGIQ---GQGSFQAQWLEASKRLSFNQINLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET        +   +    
Sbjct: 264 ----NDSTFGGQAQVTLTEQPEWQLKLQFPQLNLDNLIALNETANNNNGAVQQGQNQSML 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + FS D ++
Sbjct: 320 PRPVISSRIHEPPY-----QGLKGFSADILL 345


>gi|194366827|ref|YP_002029437.1| AsmA family protein [Stenotrophomonas maltophilia R551-3]
 gi|194349631|gb|ACF52754.1| AsmA family protein [Stenotrophomonas maltophilia R551-3]
          Length = 657

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 42/366 (11%), Positives = 102/366 (27%), Gaps = 34/366 (9%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIE 84
            DW  F+   ER      G+ + + G + + +    +V    I             +  +
Sbjct: 45  WDWNWFKGPVERAVQARTGRVLHI-GHLDVDLGRTSTVRADAITFANASWSKQPEMATAD 103

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL--SSKGVSNWFQRKSTMDMIHNVILEKI 142
            + +     PLL G +++ ++ + +P +            NW              L+++
Sbjct: 104 RIEIDVRVWPLLRGSVQLPEVRLTRPDVLLETAPRKDEPGNWDFLGDRSGGTS-PQLKRL 162

Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202
            +  GR++ +D        +                          ++ +G G +     
Sbjct: 163 RIDDGRLQFLDALGRTDIRVD-----------VRSGQPKQADAAPPLLVQGKGRWRGNPF 211

Query: 203 AFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL 260
             +     P +  +     +I L   A        G L    +  ++   F+++G     
Sbjct: 212 TLRGGTESPLQLTDSDHPFRIHLDGRAGATHAVATGTLTNPFQLRMFDLQFALSGQDLAD 271

Query: 261 LNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315
           L   L           L+G  K      R  ++  +    +         +         
Sbjct: 272 LYPLLGIAIPPSPPYALNGRLKRDHNVWRYEQFTGKVGDSD----LGGNLQFEVGGARP- 326

Query: 316 NFSENGAESMHDLNETDFF-----EEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQ 370
             +        D ++   F     +    +  N   K +  + + + +   D  ++    
Sbjct: 327 RLTATLESKRLDFDDLAGFVGAPPKTGGGETANAQQKAEAARVAASARVLPDTPYNLGKL 386

Query: 371 ENFSGD 376
                D
Sbjct: 387 RAMDAD 392


>gi|114706927|ref|ZP_01439826.1| hypothetical protein FP2506_02709 [Fulvimarina pelagi HTCC2506]
 gi|114537477|gb|EAU40602.1| hypothetical protein FP2506_02709 [Fulvimarina pelagi HTCC2506]
          Length = 1255

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 78/346 (22%), Positives = 136/346 (39%), Gaps = 48/346 (13%)

Query: 15  VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74
           + L  A   PLFIDW+ +R DFER+A+ I+G+++ V+G     +LPFPSV F+D+ +   
Sbjct: 2   LALFAALMAPLFIDWSVYRSDFEREASRILGREVRVEGEATARLLPFPSVTFQDLSVAGD 61

Query: 75  EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134
           ++ +    +E   M AE  P LSGEIR+F M ++ P L       G       K ++   
Sbjct: 62  DEDAPFLTVEEFRMNAELAPYLSGEIRIFAMALNNPVLRI-----GKDGVALPKPSIPRS 116

Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
             ++LE + +  G I   D+        SD+     +R   I    S DS+ G     G 
Sbjct: 117 AEIVLEDVVISNGTILFPDE--------SDVVDAGVSRLTGIEGNFSADSLSGPFEGSGG 168

Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF--- 251
                +   F+I A    +  +  L++      Y   IDL G +   ++   + G     
Sbjct: 169 FRLAGREVGFEIDAGKSDETGSAPLRMSFLSERYSAAIDLDGRIVTGDEIAHFDGRLAYR 228

Query: 252 ------------------SVAGDFSKLLNLE-----------LSAKKSRLSGNFKISDGN 282
                             ++ GD ++  +++            +A   R SG+  I+   
Sbjct: 229 QPLATQISDTEETESVFATLQGDNNEEQSIDGSRSSSGQSGRGNAPSVRASGSISITADR 288

Query: 283 VRISRYKLQSILPNSSTDEDNKTKV-SQDEENLLNFSENGAESMHD 327
                 +++              ++  ++     N S  G     D
Sbjct: 289 AVSDALRVEIGET--PYVLTGSGEIFVRNGALGFNVSLEGESFDVD 332


>gi|86749150|ref|YP_485646.1| AsmA [Rhodopseudomonas palustris HaA2]
 gi|86572178|gb|ABD06735.1| AsmA [Rhodopseudomonas palustris HaA2]
          Length = 1273

 Score =  148 bits (374), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 63/334 (18%), Positives = 121/334 (36%), Gaps = 27/334 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++  L+GL     V L+ A   P  +DW  FR+ FE +AT + G  + V G +   +LP 
Sbjct: 1   MQTTLLGLAIALIVALLAALVGPFVVDWNQFRDQFETEATRLAGAPVRVAGDLDARLLPT 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P++  +D+ I    D     +   L +      L+ GE R  ++ ++   L+  L + G 
Sbjct: 61  PTLRLRDVTIGGAND-PGRIRAAKLDVEFSLGALMRGEWRADELSVNGFALDLGLDADGR 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +W      +  +  + ++++++  GRI + D  S     LSD+                
Sbjct: 120 LDWPAS--GLSDLAALSIDRLNLT-GRIALHDAASRSTLELSDI-----------AFAGD 165

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--------NKAISLKIQLFPLAYPIIID 233
           + +   S+  +G       R  F+++A   A         N    L + +      +  D
Sbjct: 166 LRAQGTSLRGDGNFLMHGTRYPFRLSAGRAAASQGTSQATNDGTRLHLTVDQAGRGVTAD 225

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
           L G L +  + P + G   ++         + S    R+S   K       + +  +   
Sbjct: 226 LDGVLAFAGRSPRFEGTAMLS----ATAAPDGSRTPWRISAKVKADPALAALDQLDVSWG 281

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               +        V      LL       +   D
Sbjct: 282 AEERALKLAGSGDVRFGAAPLLTARLAARQLDGD 315


>gi|207728225|ref|YP_002256619.1| protein involved in outer membrane biogenesis [Ralstonia
           solanacearum MolK2]
 gi|206591470|emb|CAQ57082.1| protein involved in outer membrane biogenesis [Ralstonia
           solanacearum MolK2]
          Length = 749

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/429 (13%), Positives = 119/429 (27%), Gaps = 60/429 (13%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58
           RV++GL     V++  A    L  DW+  +       +  +G+  A+ G + +       
Sbjct: 6   RVILGLVITPVVIMAAAVVFVLTFDWSRAKPYLNDHVSQAIGRPFAINGDLSLTWKKPEG 65

Query: 59  -------LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P +   DI I   +       + ++ L+   E LPLL+  I +  + +D 
Sbjct: 66  ESGWRAYVPWPRLIANDITIGNPDWTRRPHAATVQRLTFVLEALPLLAHRIVIPSVTLDT 125

Query: 110 PHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVKGGRIKIIDQE-----SDQVYF 161
           P +     ++  +NW      + +      + L +I    G +++ D       +  V  
Sbjct: 126 PVVALERDNQNRNNWTFHLGTQDSKPSDWKLELREIAFSKGSVQLDDDIKRIHLAATVDT 185

Query: 162 LSDLNLQISARFLNIISPLSIDSIKG-------------------------SVIAEGTGN 196
           + +  L  +A    I        +                           +   +GT N
Sbjct: 186 VDNQTLYTAANGTAISGSEQPPVVPTASGAAASGAAAKAPVAADPQQPYGLAWTVKGTYN 245

Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGD 256
                   K       ++      +Q         IDL G L              ++G 
Sbjct: 246 NAAIHGGGKAGGVLRLQDAHRPYPLQADVTIGKTRIDLAGTLTNPASLTALDLRLHLSGA 305

Query: 257 FSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
               L                  RL G  +    + R  ++  +    +           
Sbjct: 306 SMAHLYPMTGVVLPDTPPFDTRGRLIGELRRQGSSWRYEKFTGRVGGSD----LGGTLTF 361

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
           +   E        G    H L   D        +     ++D+       K         
Sbjct: 362 AMRPEPGQRPQLTGELVSHQLLFADLAPIIGADSNASKQRRDEPVRQPADKVLPVEPFRT 421

Query: 368 ENQENFSGD 376
           +       D
Sbjct: 422 DRWNAIDAD 430


>gi|156933341|ref|YP_001437257.1| putative assembly protein [Cronobacter sakazakii ATCC BAA-894]
 gi|156531595|gb|ABU76421.1| hypothetical protein ESA_01154 [Cronobacter sakazakii ATCC BAA-894]
          Length = 613

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/387 (11%), Positives = 107/387 (27%), Gaps = 55/387 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RRVL  L  L  V   G   + + ++  DFR     Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRVLTTLMILLVVFFAGLSALVMLVNPNDFRSYMISQVERRSGYQLRLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +            + + +     PLLS ++ V  + +    +     S+  
Sbjct: 61  LSILSGRMSLTAPGASQPLVSADNMRLDVALFPLLSHQLSVRQVMLKGAVVQLTPQSEAR 120

Query: 122 SNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
                                 +  + ++ V    +     + D+   + ++NLQ+    
Sbjct: 121 HEPGAPVGPKNSAPPVEDSHGWSFDIARLKVADSVLVF-QHKDDEQITVRNINLQMEQNE 179

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
            +                       + +       +   ++  +SL   L    YP  + 
Sbjct: 180 HH-----------------------DAQLELSGKVSRDQRDLTLSLSAALNAADYPQTLS 216

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
                       +    + + G        +       L   +   D  +  S   L++ 
Sbjct: 217 AT----------VSQLSWELRGADLP---RDGIVGNGTLQARWLEGDKRLEFSALNLKA- 262

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDDLKKDDIQ 352
              + +    +  V+  +    +   + +      L   D         +     +    
Sbjct: 263 ---NDSQLAGQGSVTLGDTPGWDLDLHFSALDLEKLLAPDAATTTAVAQQGQQNARPRPV 319

Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379
            +   +E             F+    I
Sbjct: 320 IANEVEEAPYT-----GLRGFNASATI 341


>gi|296103724|ref|YP_003613870.1| AsmA family protein [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295058183|gb|ADF62921.1| AsmA family protein [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 616

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/387 (12%), Positives = 121/387 (31%), Gaps = 51/387 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RRVL  L  L  V++ G   + L ++  DFR    RQ     G ++ + G ++ H+ P 
Sbjct: 1   MRRVLTTLMILLVVLVAGLSALVLLVNPNDFRAYMVRQVEARSGYQLKLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +            + + +    +PL S +++V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAPGAAQPLVSADNMRLDVALVPLFSHQLQVNQVMLKGAVIQLTQQTEAV 120

Query: 122 SNWFQ---------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
            N                 D   +  + K+ V    +     E D+   + ++NL++   
Sbjct: 121 RNADAPVAPRENTLPDEPSDTGWSFDIGKLKVADSVLVF-QHEDDEQVTVRNINLKMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             ++ S                         F    N   ++  +SL   +    YP  +
Sbjct: 180 EHHLAS-----------------------LEFSGRVNRDQRDLTLSLNASVNASDYPHQL 216

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                             + + G       +   A +  +   ++     + ++   LQ+
Sbjct: 217 TADIQ----------QLNWQLTGADLPAQGI---AGQGTMQAVWREELKQLEMNNLNLQA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
               + +    +  V  + +     +    +   + N           N    L ++  +
Sbjct: 264 ----NDSSLKGQASVILEAKPKWVLNLQFDKLNLE-NLLPPPPASATDNDPAQLGQNQGK 318

Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379
            +        +  D      F+ D ++
Sbjct: 319 QTRPVISSNLDQPDYNGLRGFTADILL 345


>gi|320177894|gb|EFW52878.1| AsmA protein [Shigella boydii ATCC 9905]
          Length = 617

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 51/391 (13%), Positives = 121/391 (30%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF------Y 115
            S+    + +          + + + +    +PLLS ++ V  + +    +         
Sbjct: 61  LSILSGRMSLTAPGASQPLVRADNMRLDVALMPLLSHQLNVQQVMLKGAVIQLTPQTKEV 120

Query: 116 LSSK---GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + +++LQ+   
Sbjct: 121 RDENAPIAPRDNTLSDLSEDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIHLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++ ++SLK  +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLSLSLKGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    +    + V G       ++    +      +  +   +  ++  L +
Sbjct: 214 -------HDLTAVVEQITWQVQGADLPKQGIQ---GQGSFQAQWLEASKRLSFNQINLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET        +   +    
Sbjct: 264 ----NDSTFGGQAQVTLTEQPEWQLKLQFPQLNLDNLIALNETANNNNGAVQQGQNQSML 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + FS D ++
Sbjct: 320 PRPVISSRIHEPPY-----QGLKGFSADILL 345


>gi|292488726|ref|YP_003531613.1| protein AsmA [Erwinia amylovora CFBP1430]
 gi|292899882|ref|YP_003539251.1| exported protein [Erwinia amylovora ATCC 49946]
 gi|291199730|emb|CBJ46850.1| putative exported protein [Erwinia amylovora ATCC 49946]
 gi|291554160|emb|CBA21363.1| Protein asmA precursor [Erwinia amylovora CFBP1430]
          Length = 615

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 46/390 (11%), Positives = 110/390 (28%), Gaps = 54/390 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R +  L  L  VV+ G   + + ++  DFR    RQ     G  +A+ G ++ H+ P 
Sbjct: 1   MKRFITTLAILLVVVVAGMTALVVLVNPNDFRAYMVRQVEQRSGYHLALNGELRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +              + +  + LPL S ++ V  + +    +     SK +
Sbjct: 61  LSILSGPVTVTAPGAQQPVVSAANMRLDVDLLPLFSHQLSVKQVMLKGAVIRLTPDSKSL 120

Query: 122 SNWFQ-----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
                               +       +  + +  G +    Q + +   + DLNL + 
Sbjct: 121 PPADAPIGPAGSRTFSPSDDVARGWKFDISHLRIADGLLVW-QQSNGEQINVRDLNLALD 179

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                                                 +   +   + L  +L    YP 
Sbjct: 180 QTQPR-----------------------QVHIEISSRVHRDQRELQVDLSSELDITDYPR 216

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
            ++            I    + + G       +     K+++  ++    G   +    L
Sbjct: 217 RVN----------AIIQQLDYQLKGADLPPAGI---LGKAQMKASWDSLTGRFSLDEINL 263

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKK 348
            +    + +        +      L  + +      D  L  +   E++    +      
Sbjct: 264 NA----NDSQLRGTLSGTLGPHPELLANLHADSIDLDSLLGLSGAIEQDASAAEPRSGHA 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKM 378
             I             +  + Q   + D++
Sbjct: 320 PVIASVPVTDNVHSVLNALDGQLTLAVDRL 349


>gi|83593544|ref|YP_427296.1| AsmA [Rhodospirillum rubrum ATCC 11170]
 gi|83576458|gb|ABC23009.1| AsmA [Rhodospirillum rubrum ATCC 11170]
          Length = 1077

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 128/378 (33%), Gaps = 50/378 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R +L G   L ++++     VP F+DW  +R+    +   I G+ + V+G + +H+LP 
Sbjct: 1   MRTLLFGTVVLIALMVGTVLAVPSFVDWNLYRDRLSAEIQRITGRALVVEGDLSLHLLPT 60

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           P++  + + +     GS    ++++ + ++ + LPLL GE+ V  + I +P +     + 
Sbjct: 61  PALAAQGVSLANAPGGSDPVMARVDSVQVKVDLLPLLHGEVVVRSVEIIRPVIVLERLAD 120

Query: 120 GVSNWF-----------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           G  NW                             V    + +  G ++  D  +++V   
Sbjct: 121 GRGNWEMRAGQGGGDEVDGRLPGAPPVESADPLEVAFNHVEIVDGVVRYRDGGTERVIDN 180

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
            D+ L               D + G    +G         + +         +A  + I+
Sbjct: 181 LDVTLV-------------ADRLNGPFSLQGRATALGLPVSLQAMIGAIDAGRATQVGIK 227

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK-------------- 268
           L     P + +L G +      P   G   +A D        L A               
Sbjct: 228 LGLENQPSVFELTGLVSGLSTGPTLRGSMGLAVDDPAAALDRLGAAMGRDLGLSAGPMKL 287

Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328
             R++   ++S    +     +Q     +  +              ++ +   +    + 
Sbjct: 288 PLRVNSRIELSSAAAKFDDMVVQL----AGNEVKGGASAVFGAVPRIDAAFVASRIDLEA 343

Query: 329 NETDFFEEEEKKNKNDDL 346
            +T + ++         +
Sbjct: 344 WKTAWSDQPGGSPAALAV 361


>gi|312172878|emb|CBX81134.1| Protein asmA precursor [Erwinia amylovora ATCC BAA-2158]
          Length = 615

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 46/390 (11%), Positives = 110/390 (28%), Gaps = 54/390 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R +  L  L  VV+ G   + + ++  DFR    RQ     G  +A+ G ++ H+ P 
Sbjct: 1   MKRFITTLAILLVVVVAGMTALVVLVNPNDFRAYMVRQVEQRSGYHLALNGELRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +              + +  + LPL S ++ V  + +    +     SK +
Sbjct: 61  LSILSGPVTVTAPGAQQPVVSAANMRLDVDLLPLFSHQLSVKQVMLKGAVIRLTPDSKSL 120

Query: 122 SNWFQ-----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
                               +       +  + +  G +    Q + +   + DLNL + 
Sbjct: 121 PPADAPIGPAGSRTFSPSDDVARGWKFDISHLRIADGLLVW-QQSNGEQINVRDLNLALD 179

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                                                 +   +   + L  +L    YP 
Sbjct: 180 QTQPR-----------------------QVHIEISSRVHRDQRELQVDLSSELDITDYPR 216

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
            ++            I    + + G       +     K+++  ++    G   +    L
Sbjct: 217 RVN----------AIIQQLDYQLKGADLPPAGI---LGKAQMKASWDSLTGRFSLDEINL 263

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKK 348
            +    + +        +      L  + +      D  L  +   E++    +      
Sbjct: 264 NA----NDSQLRGTLSGTLGPHPELLANLHADSIDLDSLLGLSGAIEQDASAAEPRSGHA 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKM 378
             I             +  + Q   + D++
Sbjct: 320 PVIASVPVTDNVHSVLNALDGQLTLAVDRL 349


>gi|154253731|ref|YP_001414555.1| AsmA family protein [Parvibaculum lavamentivorans DS-1]
 gi|154157681|gb|ABS64898.1| AsmA family protein [Parvibaculum lavamentivorans DS-1]
          Length = 656

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/363 (15%), Positives = 116/363 (31%), Gaps = 31/363 (8%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70
            +F+V+ V A  + +F DW  FR   E + +   G+++ + G   + +   P     D+ 
Sbjct: 10  AVFAVLAVIAVVLFIFWDWNWFRPMVEARVSAAAGREVRI-GHFDVDLSFTPRAVLDDVT 68

Query: 71  IDQKEDG---SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127
           I+             IE LS+     P L G I + ++ + +P  N   +S+GV NW   
Sbjct: 69  IENPSGFGEEEPLGSIERLSVSLRAGPALRGRIVIPEIRLVKPVGNLRSNSEGVRNWDFG 128

Query: 128 KSTM-DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186
            S+  +      + ++ ++ G ++  D E    +                +        +
Sbjct: 129 TSSSGEGGAMPEIGELIIEEGSVRFADPELQADFT--------------TLIHTEEADGE 174

Query: 187 GSVIAEGTGNFDNKRSAFKITANFP--AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
             ++A   G ++      +         +       + L        I L G L    + 
Sbjct: 175 AMLVATTEGTYNGAPVEARFRGGALLTLRETERPYPVHLQAKNGDTHISLEGTLVNPLEF 234

Query: 245 PIYSGVFSVAGDFSKLLNLEL-----SAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
                   + G     L   +     S    RL G    ++G +R + +  +    +   
Sbjct: 235 AGAQLALELEGKSLDHLEPIILIPLVSTPPYRLEGRLDYAEGRIRFNDFSGRVGQSD--- 291

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359
                  V   EE     + +       L +   F        +      + Q + + + 
Sbjct: 292 -LSGDFAVDPGEERP-QITADLRSKRVLLADLGGFIGAAPGEVSQQPDMSEEQQAEHARS 349

Query: 360 EKD 362
           E  
Sbjct: 350 EAS 352


>gi|83749006|ref|ZP_00946014.1| probable transmembrane [Ralstonia solanacearum UW551]
 gi|83724344|gb|EAP71514.1| probable transmembrane [Ralstonia solanacearum UW551]
          Length = 749

 Score =  148 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/434 (13%), Positives = 133/434 (30%), Gaps = 58/434 (13%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58
           RV++GL     V++  A    L  DW+  +       +  +G+  A+ G + +       
Sbjct: 6   RVILGLVITPVVIMAAAVVFVLTFDWSRAKPYLNDHVSQAIGRPFAINGDLSLTWKKPEG 65

Query: 59  -------LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P +   DI I   +       + ++ L+   E LPLL+  I +  + +D 
Sbjct: 66  ESGWRAYVPWPRLIANDITIGNPDWTRRPHAATVQRLTFVLEALPLLAHRIVIPSVTLDT 125

Query: 110 PHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVKGGRIKIIDQE-----SDQVYF 161
           P +     ++  +NW      + +      + L +I    G +++ D       +  V  
Sbjct: 126 PVVALERDNQNRNNWTFHLGTQDSKPSDWKLELREIAFSKGSVQLDDDIKRIHLAATVDT 185

Query: 162 LSDLNLQISARFLNIISPLSIDSIKG-------------------------SVIAEGTGN 196
           + +  L  +A    I        +                           +   +GT N
Sbjct: 186 VDNQTLYTAANGTAIGGSEQPPMVPTASGAAASGAAAKAPVAADPQQPYGLAWTVKGTYN 245

Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGD 256
                   K       ++      +Q         IDL G L              ++G 
Sbjct: 246 NAAIHGGGKAGGVLRLQDAHRPYPLQADVTIGKTRIDLAGTLTNPASLTALDLRLHLSGA 305

Query: 257 FSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
               L                  RL G  +    + R  ++  +    + S       + 
Sbjct: 306 SMAHLYPLTGVVLPDTPPFDTRGRLIGELRRQGSSWRYEKFTGRVGGSDLSGTLTFAMRP 365

Query: 308 SQDEENLLNFSE-NGAESMHDLNE-TDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSH 365
           +  +   L     +      DL           K+ +++ +++   +    +    D  +
Sbjct: 366 TPGQRPQLTGELVSRQLLFADLAPIIGADSNASKQRRDEPVRQPADKVLPVEPFRTDRWN 425

Query: 366 DKENQENFSGDKMI 379
             +    F+G++++
Sbjct: 426 AIDADVKFTGERIV 439


>gi|163855041|ref|YP_001629339.1| hypothetical protein Bpet0736 [Bordetella petrii DSM 12804]
 gi|163258769|emb|CAP41068.1| conserved exported protein [Bordetella petrii]
          Length = 704

 Score =  148 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 51/387 (13%), Positives = 103/387 (26%), Gaps = 48/387 (12%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           ++VLIGLG    ++L     V    DW   +     + +  +G+  AV G + +      
Sbjct: 5   KKVLIGLGGAIVLLLAALVLVIALFDWNQLKPTINERVSAALGRPFAVNGDLTVQWRRPV 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P+P +   D+ I   +       + ++        LPLLS  + +  + + 
Sbjct: 65  DEPGWRGWVPWPHISMDDVSIGNPDWAEEPAMATLQRAEFSLSPLPLLSHHVVIRQIQLT 124

Query: 109 QPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
           +P  +      G +NW      +       + +++I    G+++  D+            
Sbjct: 125 RPAASLLRLKDGRANWVFTLPDTGEPSPWVMDIDEIGFDQGQVQFRDETLRADIEAQIDP 184

Query: 167 LQISARFLNIISPLSIDSIKGS--------------VIAEGTGNFDNKRSAFKITAN--F 210
           L     F  I           +                 +  G +               
Sbjct: 185 LGKPVPFAAIAGQAPASQADEAPPQQAQAAAAPEYVFGWKVKGRYKGLPLRGDGKIGGML 244

Query: 211 PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270
             ++ +    +Q         I L G L              ++G     L   +     
Sbjct: 245 AVRDASRPFPLQADVSVGDTRIALAGTLTDPANLGALDLRLELSGATMSDLYPLIGVTLP 304

Query: 271 ---------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDE-ENLLNFSE 319
                    RLS   +   G V     +  +    +           +  E    L  + 
Sbjct: 305 DTPRYSTDGRLSARLREPGGAVFHYRDFNGKVGASD----LHGDLTFTAGEPRPKLAGNL 360

Query: 320 NGAESMH-DLNETDFFEEEEKKNKNDD 345
           N       DL          +      
Sbjct: 361 NSRLLRMRDLGPLVGVPPAGQAKSASK 387


>gi|207744040|ref|YP_002260432.1| protein involved in outer membrane biogenesis [Ralstonia
           solanacearum IPO1609]
 gi|206595442|emb|CAQ62369.1| protein involved in outer membrane biogenesis [Ralstonia
           solanacearum IPO1609]
          Length = 712

 Score =  148 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/434 (13%), Positives = 133/434 (30%), Gaps = 58/434 (13%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58
           RV++GL     V++  A    L  DW+  +       +  +G+  A+ G + +       
Sbjct: 6   RVILGLVITPVVIMAAAVVFVLTFDWSRAKPYLNDHVSQAIGRPFAINGDLSLTWKKPEG 65

Query: 59  -------LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P +   DI I   +       + ++ L+   E LPLL+  I +  + +D 
Sbjct: 66  ESGWRAYVPWPRLIANDITIGNPDWTRRPHAATVQRLTFVLEALPLLAHRIVIPSVTLDT 125

Query: 110 PHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVKGGRIKIIDQE-----SDQVYF 161
           P +     ++  +NW      + +      + L +I    G +++ D       +  V  
Sbjct: 126 PVVALERDNQNRNNWTFHLGTQDSKPSDWKLELREIAFSKGSVQLDDDIKRIHLAATVDT 185

Query: 162 LSDLNLQISARFLNIISPLSIDSIKG-------------------------SVIAEGTGN 196
           + +  L  +A    I        +                           +   +GT N
Sbjct: 186 VDNQTLYTAANGTAIGGSEQPPMVPTASGAAASGAAAKAPVAADPQQPYGLAWTVKGTYN 245

Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGD 256
                   K       ++      +Q         IDL G L              ++G 
Sbjct: 246 NAAIHGGGKAGGVLRLQDAHRPYPLQADVTIGKTRIDLAGTLTNPASLTALDLRLHLSGA 305

Query: 257 FSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
               L                  RL G  +    + R  ++  +    + S       + 
Sbjct: 306 SMAHLYPLTGVVLPDTPPFDTRGRLIGELRRQGSSWRYEKFTGRVGGSDLSGTLTFAMRP 365

Query: 308 SQDEENLLNFSE-NGAESMHDLNE-TDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSH 365
           +  +   L     +      DL           K+ +++ +++   +    +    D  +
Sbjct: 366 TPGQRPQLTGELVSRQLLFADLAPIIGADSNASKQRRDEPVRQPADKVLPVEPFRTDRWN 425

Query: 366 DKENQENFSGDKMI 379
             +    F+G++++
Sbjct: 426 AIDADVKFTGERIV 439


>gi|39936564|ref|NP_948840.1| hypothetical protein RPA3502 [Rhodopseudomonas palustris CGA009]
 gi|39650420|emb|CAE28943.1| unknown protein [Rhodopseudomonas palustris CGA009]
          Length = 1271

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/306 (18%), Positives = 122/306 (39%), Gaps = 17/306 (5%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81
             P  IDW  FR  FE +AT ++G ++ V G +   +LP PS+  + + +    D     
Sbjct: 21  VGPYLIDWNQFRTPFEAEATRLLGAQVRVAGPLDARLLPTPSLRLQRVTVGGANDAG-RV 79

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEK 141
               L +      L+ GE+R  ++ I+   L+  L  +G  +W      +  +  + +++
Sbjct: 80  AAAKLDVEFSLGSLMRGELRADELSINGLSLDLGLDPQGRLDWPAA--GLSNLAALTVDR 137

Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201
           +++  GRI + D  S     LSD+                + +   ++  +G      +R
Sbjct: 138 LNLT-GRIALHDAASRSNLELSDI-----------AFSGELRAQAAALRGDGNLLLGGQR 185

Query: 202 SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261
             F+++ +  A + AI L+  +   A  I  DL G + + + +P + G  S+A   +   
Sbjct: 186 YPFRLSTSRAADSDAIRLRAGINQGAGGIAADLDGLVRFEQSRPRFDGTASLAALAAATG 245

Query: 262 NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321
            +  +    RL+   +      ++ + ++     + +       +        L+   + 
Sbjct: 246 EMPRT--PWRLAAKVEADPALAKLDQVEVSWGADDRALKLTGSGEARFGAAPRLDAKLSA 303

Query: 322 AESMHD 327
            +   D
Sbjct: 304 RQLDAD 309


>gi|253701956|ref|YP_003023145.1| AsmA family protein [Geobacter sp. M21]
 gi|251776806|gb|ACT19387.1| AsmA family protein [Geobacter sp. M21]
          Length = 1061

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 54/369 (14%), Positives = 120/369 (32%), Gaps = 31/369 (8%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK-GGIKIHILPFP 62
            +L  L  + +V+++ A  +P  +D   ++E+   Q    + + +  + G   + +   P
Sbjct: 9   WLLPVLATILTVIVLAATLLPRLLDLDTYKEEILAQVKGALKRDLQYQTGAFSLRL--TP 66

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +  F  + + +K+  S     + L++R   LPLL  +I +  +++++P L      +G  
Sbjct: 67  AFTFTGVTVKEKDGSSDFITADRLTVRIAILPLLRKKIVLSRLHLERPVLKIVRDRQGTF 126

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIID---QESDQVYFLSDLNLQISARFLNIISP 179
           N     +         +  + +K G I+  D    +   V  LSD +L +S         
Sbjct: 127 NVGDLLTPSTGREAPGIRGLELKKGHIRFTDFAFSDKPVVTELSDADLFLSRLVRGKSCN 186

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
             + +  GS       +           A  P     ++ K+   PL        +    
Sbjct: 187 FKLAAALGSPKGPVPVSLSGSAKI--PEAGAPFSGMEVNGKVGTGPLDAG---HFWPYYS 241

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
                   +G  ++                    G             +++  +  +   
Sbjct: 242 KWVPFKSLAGELALDAS---------------FKGRLNAFKSKA---EFRITRLNLDYPQ 283

Query: 300 DEDNKTKVSQ-DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358
              ++           L  + N  +  H   + D F+      +  DL   D++ + N  
Sbjct: 284 VFHSRLTPRLFKGSCALTLTANQLDIDHVKVDLDGFKVNGGV-RLSDLHSGDLRITANAS 342

Query: 359 EEKDNSHDK 367
               N  D 
Sbjct: 343 SNSFNLRDF 351



 Score = 39.1 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/237 (10%), Positives = 70/237 (29%), Gaps = 16/237 (6%)

Query: 140 EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP-LSIDSIKGSVIAEGTGNFD 198
              ++        D  +  V   + L+  ++          L+      ++ A     +D
Sbjct: 513 GDANLTATTYAFRDIVAKPVSRPNALSFAMNFDKEQFRITALNYQLPPAALSATAVSRYD 572

Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY-SGVFSVAGDF 257
                F I +N     +   +   +        + L  +    + + ++ SG  +++   
Sbjct: 573 G-PVNFDIRSNQFQSGEVGYMVPMVRDYRPAGPVQLQLHAAGPDMERLFWSGNAALSNVS 631

Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317
            K  +         ++GN +I+  +   ++  L+            K  V+  +      
Sbjct: 632 VKAGDKVRPVS--GVTGNVRINGESFESTQLSLRVGGS----SISGKGTVTGLDHPSFLI 685

Query: 318 SENGAESMHDLNETDFFEEEEK-----KNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369
           S +      DL++      +              +KD++Q +        +    + 
Sbjct: 686 SFSSPS--LDLSDLGLVPAKSPVRVDRVQGTLAYQKDNLQIAALSGTLGKSHLSLKG 740


>gi|56412979|ref|YP_150054.1| assembly protein [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197361908|ref|YP_002141545.1| assembly protein [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|56127236|gb|AAV76742.1| putative outer membrane assembly protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197093385|emb|CAR58836.1| putative outer membrane assembly protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
          Length = 618

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 44/335 (13%), Positives = 105/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V  G +     E+D    + D+ L +   
Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADGVLLF-QHENDDQVTVRDIRLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP   
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       +E    + +L   ++ +   +  +   L +
Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +      +V+  E+         ++   D
Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLQSSKLNLD 294


>gi|121728175|ref|ZP_01681210.1| asmA protein [Vibrio cholerae V52]
 gi|147674400|ref|YP_001216507.1| asmA protein [Vibrio cholerae O395]
 gi|121629572|gb|EAX61995.1| asmA protein [Vibrio cholerae V52]
 gi|146316283|gb|ABQ20822.1| asmA protein [Vibrio cholerae O395]
 gi|227012855|gb|ACP09065.1| asmA protein [Vibrio cholerae O395]
          Length = 703

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/432 (13%), Positives = 126/432 (29%), Gaps = 56/432 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ I L  L  +++     + L ++   F+     QA    G  + ++G I     P 
Sbjct: 1   MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL  ++++ ++ +D    +      
Sbjct: 61  IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120

Query: 120 GVSNWFQRKS-----------------------TMDMIHNVILEKIHVKGGRIKIIDQES 156
           G SN                                   ++ L  + V    ++I D+++
Sbjct: 121 GRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKA 180

Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197
                L D+ L     +   +         D  +    A+G                   
Sbjct: 181 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRDIK 240

Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    N+  + K+  +    +KA +L   +   A  + ++  G+      Q +   
Sbjct: 241 LDASFSDPSNQIDSVKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAMSKV 300

Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                      +   L  S  K  L            +S   L  +  N+    D K  V
Sbjct: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 358

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
           +  +   + F+ +  E   D       +E +     +           N   E +     
Sbjct: 359 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSASAPVTNAPAEVEPDLSA 418

Query: 368 ENQENFSGDKMI 379
            N  + +G+  I
Sbjct: 419 LNALDVAGEISI 430


>gi|146312321|ref|YP_001177395.1| putative assembly protein [Enterobacter sp. 638]
 gi|145319197|gb|ABP61344.1| AsmA family protein [Enterobacter sp. 638]
          Length = 615

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 47/384 (12%), Positives = 118/384 (30%), Gaps = 52/384 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RRVL  L  L  V++ G   + L ++  DFR    RQ     G ++ + G ++ H+ P 
Sbjct: 1   MRRVLTTLMILLVVLVAGLSALVLLVNPNDFRSYMVRQVEARSGYELKLDGSLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +      +     + + +    +PLLS +++V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAPGASAPLVSADNMRLDVALIPLLSHQLQVEQVMLKGAVIQLTPQTEAV 120

Query: 122 SNWFQR---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                              D   +  +  + V    +     E ++   L ++NL++   
Sbjct: 121 RKGDAPVAPRENSLPDVPDDAGWSFDIGSLRVVDSVLVF-QHEDEEQITLRNINLKMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             ++ +                         F    N   ++  +S+   +    YP  +
Sbjct: 180 QHHVAT-----------------------VDFSGRINRNQRDLTLSMNANVNASDYPHQL 216

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                             + ++G       +     +  L G ++     + ++   LQ+
Sbjct: 217 TADIT----------QLNWQLSGVDLPAQGIT---GQGSLQGIWREEQKQLELNNLNLQA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
               + +    +  V   E+          +   +       +     +K     ++   
Sbjct: 264 ----NDSTLKGRASVVLSEQPKWVVDLQFDKLNLE--NLLVSQTVVTDDKTVQQGQNQPT 317

Query: 353 YSVNKKEEKDNSHDKENQENFSGD 376
            +           D     +F+ D
Sbjct: 318 QTRPVIASNVEQPDYNGLRSFTAD 341


>gi|260598553|ref|YP_003211124.1| putative assembly protein [Cronobacter turicensis z3032]
 gi|260217730|emb|CBA32126.1| Protein asmA [Cronobacter turicensis z3032]
          Length = 613

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 39/369 (10%), Positives = 101/369 (27%), Gaps = 50/369 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RRVL  L  L  V   G   + + ++  DFR     Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRVLTTLMILLVVFFAGLSALVMLVNPNDFRSYMISQVERRSGYQLKLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +            + + +     PLLS ++ V  + +    +     S+  
Sbjct: 61  LSILSGRMSLTAPGASQPLVSADNMRLDVALFPLLSHQLSVRQVMLKGAVVQLTPQSEAR 120

Query: 122 SNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
                                 +  + ++ V    +     + D+   + ++NLQ+    
Sbjct: 121 HEPGAPVGPKSSAPLVEDTRGWSFDIARLKVADSVLVF-QHKDDEQVTVRNINLQMEQNE 179

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
            +                       + +       +   ++  +SL   L    YP  + 
Sbjct: 180 HH-----------------------DAQLELSGKISRDQRDLTLSLTAALNAADYPQTLS 216

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
                       +    + + G        +    +      +   D  +  S   L++ 
Sbjct: 217 AT----------VSQLSWQLHGADLP---RDGITGEGTFQARWLEGDKRLEFSALNLKA- 262

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK-KDDIQ 352
              + +    +  V+  +    +   + +    D              +           
Sbjct: 263 ---NDSQLAGQGSVTLGDTPAWDLDLHFSALDLDKLLAPDPATTTAVAQQGQQSALPRPV 319

Query: 353 YSVNKKEEK 361
            +    +  
Sbjct: 320 IAAEVDQAP 328


>gi|327483750|gb|AEA78157.1| AsmA protein [Vibrio cholerae LMA3894-4]
          Length = 703

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 60/432 (13%), Positives = 129/432 (29%), Gaps = 56/432 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ I L  L  +++     + L ++   F+     QA    G  + ++G I     P 
Sbjct: 1   MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL  ++++ ++ +D    +      
Sbjct: 61  IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120

Query: 120 GVSNWF-----------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQES 156
           G SN                          R S      ++ L  + V    ++I D+++
Sbjct: 121 GRSNLDALTQAQSKPASAPATTDSAPASQPRSSEPAAAWSIELGGVSVSNTVLEITDKKA 180

Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197
                L D+ L     +   +         D  +    A+G                   
Sbjct: 181 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKNQQKFAAQGEAEVRLSADFKQYALRNIN 240

Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    N+  + K+  +    +KA +L   +   A  + ++  G+      Q I   
Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMQLNAQGSASLMVNQAISKV 300

Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                      +   L  S  K  L            +S   L  +  N+    D K  V
Sbjct: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 358

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
           +  +   + F+ +  E   D       +E +     +         + N   E +     
Sbjct: 359 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSSPATNAPAEVEPDLSA 418

Query: 368 ENQENFSGDKMI 379
            N  + +G+  I
Sbjct: 419 LNALDVAGEISI 430


>gi|229529871|ref|ZP_04419261.1| AsmA protein [Vibrio cholerae 12129(1)]
 gi|229333645|gb|EEN99131.1| AsmA protein [Vibrio cholerae 12129(1)]
          Length = 749

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/432 (13%), Positives = 127/432 (29%), Gaps = 56/432 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ I L  L  +++     + L ++   F+     QA    G  + ++G I     P 
Sbjct: 47  MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 106

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL  ++++ ++ +D    +      
Sbjct: 107 IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 166

Query: 120 GVSNWFQRKS-----------------------TMDMIHNVILEKIHVKGGRIKIIDQES 156
           G SN                                   ++ L  + V    ++I D+++
Sbjct: 167 GRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPTAAWSIELGGVSVSNAVLEITDKKA 226

Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197
                L D+ L     +   +         D  +    A+G                   
Sbjct: 227 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 286

Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    N+  + K+  +    +KA +L   +   A  + ++  G+      Q I   
Sbjct: 287 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLVVNQAISKA 346

Query: 250 VFSVA--GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                      +   L  S  K  L            +S   L  +  N+    D K  V
Sbjct: 347 GLDALKVQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 404

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
           +  +   + F+ +  E   D       +E +     +         + N   E +     
Sbjct: 405 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSA 464

Query: 368 ENQENFSGDKMI 379
            N  + +G+  I
Sbjct: 465 LNALDVAGEISI 476


>gi|168466220|ref|ZP_02700090.1| protein AsmA [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|194442823|ref|YP_002041390.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194401486|gb|ACF61708.1| protein AsmA [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|195631151|gb|EDX49711.1| protein AsmA [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
          Length = 618

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 105/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E+D    + D+ L +   
Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP   
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       +E    + +L   ++ +   +  +   L +
Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +    + +V+  E+         ++   D
Sbjct: 264 ----NDSSLTGQVQVTLAEQPEWQIDLQSSKLNLD 294


>gi|297578643|ref|ZP_06940571.1| asmA protein [Vibrio cholerae RC385]
 gi|297536237|gb|EFH75070.1| asmA protein [Vibrio cholerae RC385]
          Length = 703

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/432 (13%), Positives = 127/432 (29%), Gaps = 56/432 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ I L  L  +++     + L ++   F+     QA    G  + ++G I     P 
Sbjct: 1   MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL  ++++ ++ +D    +      
Sbjct: 61  IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120

Query: 120 GVSNWF-----------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQES 156
           G SN                            S      ++ L  + V    ++I D+++
Sbjct: 121 GRSNLDALTQAQSKPASTPATTEPAPASQPSSSEPTAAWSIELGGVSVSNAVLEITDKKA 180

Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197
                L D+ L     +   +         D  +    A+G                   
Sbjct: 181 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 240

Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    N+  + K+  +    +KA +L   +   A  + ++  G+      Q I   
Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMQLNAQGSASLMVNQAISKV 300

Query: 250 VFSVA--GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                      +   L  S  K  L            +S   L  +  N+    D K  V
Sbjct: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 358

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
           +  +   + F+ +  E   D       +E +     +         + N   E +     
Sbjct: 359 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSLSAPATNAPAEVEPDLSA 418

Query: 368 ENQENFSGDKMI 379
               + +G+  I
Sbjct: 419 LKALDVAGEISI 430


>gi|77361725|ref|YP_341300.1| AsmA protein [Pseudoalteromonas haloplanktis TAC125]
 gi|76876636|emb|CAI87858.1| putative AsmA protein [Pseudoalteromonas haloplanktis TAC125]
          Length = 649

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/372 (15%), Positives = 133/372 (35%), Gaps = 36/372 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +   +G +  + +      P  I           Q     G+ + +KG   + + P 
Sbjct: 1   MKTLFKIIGVILLLCIALIVAAPFLIPTDAIFNKVSEQVEQTTGRTLTIKGDKTLSVFPA 60

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +   D+     + GS    + ++ L++   +L LL GE ++    I++P +       
Sbjct: 61  LKLELNDVHFANMKSGSRADMASMQQLAVHIPWLSLLDGEFKLDKFVINEPDILLETDKN 120

Query: 120 GVSNWFQRKSTMDMI---------------HNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
           G +NW    +  +                  ++ L ++ + GG    +D ++     +SD
Sbjct: 121 GKANWQLFDAVAEQPKEQTGSAEAIKLPENFDIELGEVAIYGGTFTYLDGKTGVKQQISD 180

Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
           L L I            + S++ ++  +G   +  +R    +  + PAK    +    + 
Sbjct: 181 LELAI-----------LLPSLRKTLEVKGAITYMQERFELDVKLDTPAKAIEGT-TFNIQ 228

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS--DGN 282
                 ++DL       ++     G  +++GD  K +      + +     F     +G 
Sbjct: 229 QSLDSRLVDLTFEGTIAKQGQDIKGQLALSGDSVKNIAKWQGVELNAKDNAFNAFSVNGK 288

Query: 283 VRI--SRYKLQSILPN-SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339
           + +   ++KL+ ++    +     K++++  +   L    N    M DLN        +K
Sbjct: 289 MHLVGEQFKLEELIATLDALQIKGKSELNLGK--RLAVMANIDLGMLDLNPYLPETVAKK 346

Query: 340 KNKNDDLKKDDI 351
           +    D  K   
Sbjct: 347 EQPTTDETKPAE 358


>gi|192292383|ref|YP_001992988.1| AsmA family protein [Rhodopseudomonas palustris TIE-1]
 gi|192286132|gb|ACF02513.1| AsmA family protein [Rhodopseudomonas palustris TIE-1]
          Length = 1274

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/306 (18%), Positives = 122/306 (39%), Gaps = 17/306 (5%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81
             P  IDW  FR  FE +AT ++G ++ V G +   +LP PS+  + + +    D    +
Sbjct: 21  VGPYLIDWNQFRTPFEAEATRLLGAQVRVAGALDARLLPTPSLRLQRVTVGGANDAGRFA 80

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEK 141
             + L +      L+ GE+R  ++ I+   L+  L  +G  +W         +  + +++
Sbjct: 81  AAK-LDVEFSLGSLMRGELRADELSINGLSLDLGLDPQGRLDWPA--VGFSNLAALTVDR 137

Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201
           +++  GRI + D  S     LSD+                + +   ++  +G      +R
Sbjct: 138 LNLT-GRIALHDAASRSNLELSDI-----------AFSGELRAQAAALRGDGNFLLGGQR 185

Query: 202 SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261
             F+++ +  A   AI L+  +   A  I  DL G + + + +P++ G  S+A   +   
Sbjct: 186 YPFRLSTSRAADGDAIRLRAGINQGAGGIAADLDGLVRFGQSRPLFDGTASLAALAAATG 245

Query: 262 NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321
             E      RL+   +      ++ + ++     + +       +        L+   + 
Sbjct: 246 --ETPRTPWRLAAKVEADPALAKLDQVEVSWGADDRALKLTGSGEARFGAAPRLDAKLSA 303

Query: 322 AESMHD 327
            +   D
Sbjct: 304 RQLDAD 309


>gi|229525648|ref|ZP_04415053.1| AsmA protein [Vibrio cholerae bv. albensis VL426]
 gi|229339229|gb|EEO04246.1| AsmA protein [Vibrio cholerae bv. albensis VL426]
          Length = 701

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 58/430 (13%), Positives = 127/430 (29%), Gaps = 54/430 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ I L  L  +++     + L ++   F+     QA    G  + ++G I     P 
Sbjct: 1   MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL  ++++ ++ +D    +      
Sbjct: 61  IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120

Query: 120 GVSNWF---------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
           G SN                          S      ++ L  + V    ++I D+++  
Sbjct: 121 GRSNLDALTQAQSKPAPATTDSVPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKAGS 180

Query: 159 VYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF----------------- 197
              L D+ L     +   +         D  +    A+G                     
Sbjct: 181 HTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNINLD 240

Query: 198 ------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
                  N+  + K+  +    +KA +L   +   A  + ++  G+      Q I     
Sbjct: 241 ASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMQLNAQGSASLVVNQAISKVGL 300

Query: 252 SV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
                    +   L  S  K  L            +S   L  +  N+    D K  V+ 
Sbjct: 301 DALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADVTL 358

Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369
            +   + F+ +  E   D       +E +     +         + N   E +       
Sbjct: 359 ADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSALK 418

Query: 370 QENFSGDKMI 379
             + +G+  I
Sbjct: 419 ALDVAGEISI 428


>gi|16765450|ref|NP_461065.1| assembly protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167991037|ref|ZP_02572136.1| protein AsmA [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|16420654|gb|AAL21024.1| suppressor of ompF assembly mutants [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|205330474|gb|EDZ17238.1| protein AsmA [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|261247335|emb|CBG25160.1| putative outer membrane assembly protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. D23580]
 gi|267994176|gb|ACY89061.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301158681|emb|CBW18193.1| putative outer membrane assembly protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. SL1344]
 gi|312913111|dbj|BAJ37085.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321224769|gb|EFX49832.1| AsmA protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|323130443|gb|ADX17873.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332989055|gb|AEF08038.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 618

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 105/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E+D    + D+ L +   
Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP   
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       +E    + +L   ++ +   +  +   L +
Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +    + +V+  E+         ++   D
Sbjct: 264 ----NDSSLTGQVQVTLAEQPEWQIDLQSSKLNLD 294


>gi|269102247|ref|ZP_06154944.1| AsmA protein [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268162145|gb|EEZ40641.1| AsmA protein [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 706

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 50/441 (11%), Positives = 119/441 (26%), Gaps = 68/441 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++    +  L  ++ +G   +   ++   F+     Q     G+ + + G I     P 
Sbjct: 1   MKKFFYVVVALLLIIALGIGALLTLVNPNQFKPLISEQVKKATGRDLVIDGDISWRFFPT 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +                   K     +    +PL S ++ +  + ++  H+       
Sbjct: 61  LGLTVGKTAFRNPNGFTEPDLMKFTDAELSVSVMPLFSHQLEIGKVILNGAHIFIETRKD 120

Query: 120 GVSNWF------------------------QRKSTMDMIHNVILEKIHVKGGRIKI---- 151
           GVSN                             +  +    + L  I V      I    
Sbjct: 121 GVSNLDGLGEASQSPSESSAHSEKSTKTQNDSATKSEQPWAISLAGIEVTNASATINNDQ 180

Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS--------- 202
            D  +       +L+  I  ++  +   L  ++      A+G  +F+   +         
Sbjct: 181 TDSATLLTNLNLNLDRFIPGQWSAMNFDLDGNTNGIGFSAKGKTSFNLSSNYKHIALKDV 240

Query: 203 --------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248
                            ++ +     +  ++K Q       +     G L  N  + +  
Sbjct: 241 DFTASAESKTFHIPQLSLSLDHFDFGQWATIKYQTQGSIPNLKFASQGALRLNLDKALTK 300

Query: 249 GVFS--VAGDFSKLLNLELSAKKSRLSGNFK--ISDGNVRISRYKLQSILPNSSTDEDNK 304
             F             L     K  L+G+ +  +++    +S  KL             +
Sbjct: 301 AEFEQIALTADLSGAMLPRPEMKIALNGDAQYLVAEKLASLSNLKLVV----DEVTATGQ 356

Query: 305 TKVSQDEENLLNFSENGAESMHD-------LNETDFFEEEEKKNKNDDLKKDDIQYSVNK 357
                  +  L F  +  +   D              + E K ++  D+ K  +  +   
Sbjct: 357 LSYQTSTKPKLQFDLHSPDINVDKWLGMSSKQNATIAQTESKSSQASDVAKGSVSQTKVT 416

Query: 358 KEEKDNSHDKENQENFSGDKM 378
           +         +     + DK+
Sbjct: 417 EPNLSALKSFDLNGQLAVDKL 437


>gi|16761049|ref|NP_456666.1| assembly protein [Salmonella enterica subsp. enterica serovar Typhi
           str. CT18]
 gi|29141254|ref|NP_804596.1| assembly protein [Salmonella enterica subsp. enterica serovar Typhi
           str. Ty2]
 gi|213052468|ref|ZP_03345346.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213423926|ref|ZP_03356906.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
 gi|213425527|ref|ZP_03358277.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213584640|ref|ZP_03366466.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213647022|ref|ZP_03377075.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213864733|ref|ZP_03386852.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|289825333|ref|ZP_06544582.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|25364849|pir||AE0770 probable outer membrane assembly protein STY2333 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16503347|emb|CAD02483.1| putative outer membrane assembly protein [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|29136880|gb|AAO68445.1| putative outer membrane assembly protein [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
          Length = 618

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 44/335 (13%), Positives = 106/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V  G + +   E+D    + D+ L +   
Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVA-GSVLVFQHENDDQVTVRDIRLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP   
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       +E    + +L   ++ +   +  +   L +
Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +      +V+  E+         ++   D
Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLRSSKLNLD 294


>gi|167551068|ref|ZP_02344823.1| protein AsmA [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205324040|gb|EDZ11879.1| protein AsmA [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
          Length = 618

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 45/387 (11%), Positives = 121/387 (31%), Gaps = 51/387 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E+D    + D+ L +   
Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP   
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       +E    + +L   ++ +   +  +   L +
Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
               + +      +V+  E+         ++   D N         +        ++ + 
Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLRSSKLNLD-NLLPHHSAVAQTGGAVSQGQNTLP 318

Query: 353 YSVNKKEEKDNSHDKENQENFSGDKMI 379
            +      + ++   +  ++F+ + ++
Sbjct: 319 LTRPVIASRVSAPPYQGLQSFTAEIVL 345


>gi|317048806|ref|YP_004116454.1| AsmA family protein [Pantoea sp. At-9b]
 gi|316950423|gb|ADU69898.1| AsmA family protein [Pantoea sp. At-9b]
          Length = 599

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 59/386 (15%), Positives = 120/386 (31%), Gaps = 49/386 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR++  L  L  VV+ G   + L ++  DFR    +Q     G ++ V G ++ H+ P 
Sbjct: 1   MRRLITTLAILLVVVVAGMTALVLLVNPNDFRTYMVQQVEQRSGYRLQVNGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +            E + +     PLLS ++ V  + +    +     S   
Sbjct: 61  LSILAGRMSLTAPGASQPVITAENMRLDVNLWPLLSHQLSVSQVMLKNAIIRVTPESDAQ 120

Query: 122 S-------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                         +      +  + K+ +    +    Q  D+ Y   DLNL ++    
Sbjct: 121 KPSGSPVGPRDAEPTASSNGWSFDIGKLRLADSLLIWQQQGGDE-YNFRDLNLSLNQDAS 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                             +   +N  +SLK QL    YP  ++ 
Sbjct: 180 -----------------------KQASIDLSTRISRNQRNLTVSLKGQLDAAQYPHRLNG 216

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
             +             +++ G       +     K  LSG+ + ++   + +  KLQ   
Sbjct: 217 RIDA----------LDYTLDGANLPTQGI-----KGTLSGDGEWNNDRQQFALNKLQL-- 259

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-LNETDFFEEEEKKNKNDDLKKDDIQY 353
             + +  D   + S      LN   + A    D L  +    +         ++   I  
Sbjct: 260 SANDSALDGSAEGSLLLPQQLNLKLHAAALNLDNLMASAPVSDSSAPQHASVIRTPVIAE 319

Query: 354 SVNKKEEKDNSHDKENQENFSGDKMI 379
              +          +   N + D+ +
Sbjct: 320 PRERDNSDSPLTMMDLTLNLTADQAV 345


>gi|198245281|ref|YP_002216207.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|197939797|gb|ACH77130.1| protein AsmA [Salmonella enterica subsp. enterica serovar Dublin
           str. CT_02021853]
          Length = 618

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 41/335 (12%), Positives = 103/335 (30%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E+D    + D+ L +   
Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP  +
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYPHNL 216

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                             + + G       +E    + +L   ++ +   +  +   L +
Sbjct: 217 TASIE----------QLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +      +V+  E+         ++   D
Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLQSSKLNLD 294


>gi|300704818|ref|YP_003746421.1| outer membrane biogenesis protein, asma family [Ralstonia
           solanacearum CFBP2957]
 gi|299072482|emb|CBJ43832.1| putative outer membrane biogenesis protein, AsmA family [Ralstonia
           solanacearum CFBP2957]
          Length = 749

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 61/429 (14%), Positives = 120/429 (27%), Gaps = 60/429 (13%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58
           RV++GL     V++  A    L  DW+  +       +  +G+  A+ G + +       
Sbjct: 6   RVILGLVITPVVIMASAAVFVLTFDWSRAKPYLNDHVSQAIGRPFAINGDLSLTWKKPEG 65

Query: 59  -------LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P +   DI I   +       + ++ L+   E LPLL+  I +  + +D 
Sbjct: 66  ESGWRAYVPWPRLIANDITIGNPDWTRRPHVATVQRLTFVLEALPLLAHRIVIPSVTLDT 125

Query: 110 PHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVKGGRIKIIDQE-----SDQVYF 161
           P +     ++  +NW      + +      + L +I    G +++ D       +  V  
Sbjct: 126 PVVALERDNQNRNNWTFHLGTQDSKPSDWKLELREIAFSKGSVQLDDDIKRIHLAATVDT 185

Query: 162 LSDLNLQISARFLNIISPLSIDSIKG-------------------------SVIAEGTGN 196
           + +  L  +A    I        +                           +   +GT N
Sbjct: 186 VDNQTLYTAANGTAISGSEQPPVVPTASGAAASGAAAKAPVAADPQQPYGLAWTVKGTYN 245

Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGD 256
               R   K       ++      +Q         IDL G L              ++G 
Sbjct: 246 NAAIRGGGKAGGVLRLQDAHRPYPLQADVTVGKTRIDLAGTLTNPASLTALDLRLHLSGA 305

Query: 257 FSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
               L                  RL G  +    + R  ++  +    +           
Sbjct: 306 SMAHLYPLTGVVLPDTPPFDTRGRLIGELRRQGSSWRYEKFTGRVGGSD----LGGTLTF 361

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
           +   E        G    H L   D        +     ++D+       K         
Sbjct: 362 AMRPEPGQRPQLTGELVSHQLLFADLAPIIGADSNASKQRRDEPVRQPADKVLPVEPFRT 421

Query: 368 ENQENFSGD 376
           +       D
Sbjct: 422 DRWNAIDAD 430


>gi|168259575|ref|ZP_02681548.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|205351130|gb|EDZ37761.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
          Length = 618

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E+D    + D+ L +   
Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP   
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       +E    + +L   ++ +   +  +   L +
Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +      +V+  E+         ++   D
Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLRSSKLNLD 294


>gi|254226389|ref|ZP_04919977.1| asmA protein [Vibrio cholerae V51]
 gi|125621078|gb|EAZ49424.1| asmA protein [Vibrio cholerae V51]
          Length = 701

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 58/430 (13%), Positives = 128/430 (29%), Gaps = 54/430 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ I L  L  +++     + L ++   F+     QA    G  + ++G I     P 
Sbjct: 1   MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL  ++++ ++ +D    +      
Sbjct: 61  IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120

Query: 120 GVSNWFQRKS---------------------TMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
           G SN                                 ++ L  + V    ++I D+++  
Sbjct: 121 GRSNLDALTQAQSKPAPATTDSAPASQSSSSEPTAAWSIELGGVSVSNAVLEITDKKAGS 180

Query: 159 VYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF----------------- 197
              L D+ L     +   +         D  +    A+G                     
Sbjct: 181 HTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNINLD 240

Query: 198 ------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
                  N+  + K+  +    +KA +L   +   A  + +++ G+      Q I     
Sbjct: 241 ASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAAEMKLNVQGSASLMVNQAISKVGL 300

Query: 252 SV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
                    +   L  S  K  L            +S   L  +  N+    D K  V+ 
Sbjct: 301 DALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADVTL 358

Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369
            +   + F+ +  E   D       +E +     +         + N   E +      N
Sbjct: 359 ADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPAANVPAEVEPDLSALN 418

Query: 370 QENFSGDKMI 379
             + +G+  I
Sbjct: 419 ALDVAGEISI 428


>gi|153215070|ref|ZP_01949787.1| asmA protein [Vibrio cholerae 1587]
 gi|124114933|gb|EAY33753.1| asmA protein [Vibrio cholerae 1587]
          Length = 703

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 58/432 (13%), Positives = 127/432 (29%), Gaps = 56/432 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ I L  L  +++     + L ++   F+     QA    G  + ++G I     P 
Sbjct: 1   MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL  ++++ ++ +D    +      
Sbjct: 61  IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120

Query: 120 GVSNWF-----------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQES 156
           G SN                            S      ++ L  + V    ++I D+++
Sbjct: 121 GRSNLDALTQAQSKPASTPATTEPAPASQPSSSEPTAAWSIELGGVSVSNAVLEITDKKA 180

Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197
                L D+ L     +   +         D  +    A+G                   
Sbjct: 181 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 240

Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    N+  + K+  +    +KA +L   +   A  + ++  G+      Q I   
Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAISKV 300

Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                      +   L  S  K  L            +S   L  +  N+    D K  V
Sbjct: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 358

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
           +  +   + F+ +  E   D       +E +     +         + N   E +     
Sbjct: 359 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSA 418

Query: 368 ENQENFSGDKMI 379
               + +G+  I
Sbjct: 419 LKALDVAGEISI 430


>gi|288934424|ref|YP_003438483.1| AsmA family protein [Klebsiella variicola At-22]
 gi|288889153|gb|ADC57471.1| AsmA family protein [Klebsiella variicola At-22]
          Length = 615

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 47/385 (12%), Positives = 120/385 (31%), Gaps = 56/385 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+L  L  L +V++ G  ++ L ++  DFR     +     G ++ + G ++ H+ P 
Sbjct: 1   MRRILTTLMILLAVIVAGLTSLVLLVNPNDFRAYMVHEVAERSGYQLELDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS +++V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGAEEPVIRADNMRLDVALLPLLSHQLQVKQVMLKGAVIQLTPKTEAV 120

Query: 122 SNWFQ---------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
            +             ++  D   +  + ++ V    +     E+ +   + D+ LQ+   
Sbjct: 121 RDSAAPVVPHDNTLPQAPEDRGWSYDVRQLQVAD-SVLFFQHENGEQVTVRDIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP  +
Sbjct: 180 ENHRAT-----------------------VDFSGRINRDQRDLALSFSATVQGGDYPHSL 216

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
               +             + + G        +    +  L  +++     +R     L  
Sbjct: 217 KADFS----------QLSWQLRGAELP---PDGINGQGSLQASWQEDGKTLRFDNLNL-- 261

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDD 350
               S +       V   +    +   +      D  L  +    +     +     +  
Sbjct: 262 --MASGSTLTGNGSVVLGDRPDWSLDLHATTLNLDSLLAPSSPATDSSASQQGQSQTRPL 319

Query: 351 IQYSVNKKEEKDNSHDKENQENFSG 375
                +  E      D ++   F+G
Sbjct: 320 RPVIADSDER----EDYQSLRGFNG 340


>gi|238761093|ref|ZP_04622070.1| hypothetical protein ykris0001_34380 [Yersinia kristensenii ATCC
           33638]
 gi|238761346|ref|ZP_04622322.1| hypothetical protein ykris0001_20790 [Yersinia kristensenii ATCC
           33638]
 gi|238700320|gb|EEP93061.1| hypothetical protein ykris0001_20790 [Yersinia kristensenii ATCC
           33638]
 gi|238700573|gb|EEP93313.1| hypothetical protein ykris0001_34380 [Yersinia kristensenii ATCC
           33638]
          Length = 608

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 46/379 (12%), Positives = 105/379 (27%), Gaps = 55/379 (14%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70
            L  V++ G   + L ++  DFR    +Q     G  + + G ++ H+ P  S+      
Sbjct: 3   ILLVVLVAGMSALVLLVNPNDFRAYMVKQVERKSGYHLQLDGDLRWHVWPQLSIIVGRTA 62

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--- 127
           +      +     E + +  +  PLLS ++ V  + +    +     S+           
Sbjct: 63  LTAPGAAAPVVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLTPDSEAQQEPGAPVAP 122

Query: 128 ----KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                        + + K+ V    +     ++DQ   + D+NL++S             
Sbjct: 123 AGNAPLDEHRAWKLDINKVQVADSLLIWQRSDNDQ-VNVRDINLELSQDPQR-------- 173

Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243
                                    N   ++   SL        YP              
Sbjct: 174 ---------------QVHITLDSRVNRNQRDLTFSLVADADMRHYPQQFS---------- 208

Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
             I    + + G    +  +     +  L  +++     + +++    +    ++     
Sbjct: 209 ASISQFTYKLEGADIPVGGVS---GQGTLQASYQRDIQQLLLNQLSFTA----NNNQLTG 261

Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS---VNKKEE 360
             K +         +        D      F  E K   +          +   +  + +
Sbjct: 262 SAKATLGPVPEYVINLAADNLNLD----SIFGWEPKSTASAKATAKVATVTSPVIAAQID 317

Query: 361 KDNSHDKENQENFSGDKMI 379
            D   D E   +FS    +
Sbjct: 318 DDVGQDLEALRDFSAQMTL 336


>gi|168242195|ref|ZP_02667127.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|194447724|ref|YP_002046170.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194406028|gb|ACF66247.1| protein AsmA [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|205338325|gb|EDZ25089.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
          Length = 618

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E+D    + D+ L +   
Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP   
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       +E    + +L   ++ +   +  +   L +
Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +      +V+  E+         ++   D
Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLRSSKLNLD 294


>gi|290508628|ref|ZP_06547999.1| AsmA protein [Klebsiella sp. 1_1_55]
 gi|289778022|gb|EFD86019.1| AsmA protein [Klebsiella sp. 1_1_55]
          Length = 615

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 47/385 (12%), Positives = 120/385 (31%), Gaps = 56/385 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+L  L  L +V++ G  ++ L ++  DFR     +     G ++ + G ++ H+ P 
Sbjct: 1   MRRILTTLMILLAVIVAGLTSLVLLVNPNDFRAYMVHEVAERSGYQLELDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS +++V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGAEEPVIRADNMRLDVALLPLLSHQLQVKQVMLKGAVIQLTPKTEAV 120

Query: 122 SNWFQ---------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
            +             ++  D   +  + ++ V    +     E+ +   + D+ LQ+   
Sbjct: 121 RDSAAPVVPHDNTLPQAPEDRGWSYDVRQLQVAD-SVLFFQHENGEQVTVRDIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP  +
Sbjct: 180 ENHRAT-----------------------VDFSGRINRDQRDLALSFSATVQGGDYPHSL 216

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
               +             + + G        +    +  L  +++     +R     L  
Sbjct: 217 KADFS----------QLSWQLRGAELP---PDGINGQGSLQASWQEDGKTLRFDNLNL-- 261

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDD 350
               S +       V   +    +   +      D  L  +    +     +     +  
Sbjct: 262 --MASGSTLTGNGSVVLGDRPDWSLDLHATTLNLDSLLAPSSPATDSSASQQGQSQTRPL 319

Query: 351 IQYSVNKKEEKDNSHDKENQENFSG 375
                +  E      D ++   F+G
Sbjct: 320 RPVIADSDER----EDYQSLRGFNG 340


>gi|298293074|ref|YP_003695013.1| AsmA family protein [Starkeya novella DSM 506]
 gi|296929585|gb|ADH90394.1| AsmA family protein [Starkeya novella DSM 506]
          Length = 1205

 Score =  146 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 59/340 (17%), Positives = 128/340 (37%), Gaps = 23/340 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +L+ +     + +  AF  P  +DWT +R  FE QA  ++G  + ++G I   ILP 
Sbjct: 1   MQNLLLTIASAIILAVAAAFAAPFVVDWTQWRPQFEAQAARVIGAPVVIRGPIDAQILPT 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P +  +D+ I   + G        ++ R     L+ G++    + I +P +   + + G 
Sbjct: 61  PRIVLRDVSI-GVDGGGTGLAAAEVNGRLSLNALMRGQVVADRLDIQRPRMRLVVDATGK 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                  +         + ++ +  G ++++D+ +D+ + + D+++              
Sbjct: 120 L---ALPTGAVRPAGFTIAELGITDGSLELVDRANDRTFKVDDIDV-----------TGD 165

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
           I    G    EG    D  R   +++    A +    L++ L  +  P+ ID  G L   
Sbjct: 166 IAGALGPARLEGEVETDGVRRKLRVSLAAFAPDGTGKLRLGLQNVGSPLSIDADGVLSLA 225

Query: 242 EKQPIYSGVFSVAGDFSKLLN-------LELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
             +P ++G  ++A   +  L             K   L+G   ++   + +S   L    
Sbjct: 226 GGKPSFNGRAALAKAATPALRDADGTTPPADPLKGWSLAGTADVTAQAIAVSDLSLTLEA 285

Query: 295 PNSSTDEDNKTKVSQDEE-NLLNFSENGAESMHDLNETDF 333
                +     +++   +          A    DLN    
Sbjct: 286 AERPVELTGTARLTSATKAQPSRLEMKLAARQIDLNAATG 325


>gi|237732116|ref|ZP_04562597.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226907655|gb|EEH93573.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 617

 Score =  146 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 46/386 (11%), Positives = 117/386 (30%), Gaps = 55/386 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF------Y 115
            S+    + +  +       + + + +     PLLS ++ V  + +    +         
Sbjct: 61  LSILSGRVVLTAEGASEPLIRADNMRLDVALWPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 116 LSSK---GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  + ++ V    +     E D+   + D+ L++   
Sbjct: 121 RGKDAPVAPKDNMLPDLAEDKGWSFDIARLRVADSVLVF-QHEDDEQVTVRDIRLEMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP  +
Sbjct: 180 SQHRGT-----------------------FDFSGRVNRDQRDLALSFNGTVDASDYPHNL 216

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                             + + G        +    +  L   +      +  S+  L +
Sbjct: 217 SANIE----------QLSWQLQGADLP---PQGINGQGHLQAQWLEEKKQLSFSQINLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
               + +    +  V+  E+          +   D       + +       D+++   Q
Sbjct: 264 ----NDSSFSGQAHVALLEKPEWAVDLKFGQLNLD---NLLVQHDAAATAKGDVQQGQSQ 316

Query: 353 YSVNK--KEEKDNSHDKENQENFSGD 376
            ++ +     + ++   +  + FS D
Sbjct: 317 STLARPVIASQVDAVSYQGLKGFSAD 342


>gi|312958698|ref|ZP_07773218.1| hypothetical protein PFWH6_0596 [Pseudomonas fluorescens WH6]
 gi|311287241|gb|EFQ65802.1| hypothetical protein PFWH6_0596 [Pseudomonas fluorescens WH6]
          Length = 689

 Score =  146 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 47/380 (12%), Positives = 107/380 (28%), Gaps = 43/380 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56
           R+++  +   F +++  A    +F DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIVAWICASFVLLIAVAVLFLVFFDWNRIKPPLNAKVSEELHRPFAINGDLAVVWRREP 64

Query: 57  ------HILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P+P V  +D+ +   +         ++ + +R   L LL   + +  + + 
Sbjct: 65  DEGGWRAWVPWPHVIAEDLSLGNPDWSKKPQMVTLKKVELRISPLALLVQRVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQR-----KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
           +P       + G +NW  +              V +  I    G + + DQ       + 
Sbjct: 125 EPSAELQRLADGRANWTFKFDPKDPDAEPSNWVVDIGAIGFDKGHVTLDDQTLKTQLDVI 184

Query: 164 DLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAFKITAN--FPAK 213
              L     F  I+                  +   +  G +  ++             +
Sbjct: 185 VDPLGKPIPFGEIVGDADAKKALEKGAAPQDYAFGLKVKGQYHGQKLDGAGKIGGLLALQ 244

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
           + A    +Q         I L G L              +AG     L            
Sbjct: 245 DAAKPFPLQAQVNIADTRIALAGTLTDPRNLGALDLRLKLAGASLGNLYPLTGVTLPDSP 304

Query: 271 --RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE-NGA 322
                G+      +    + R   +  +    +      N   V+      L+ +  +  
Sbjct: 305 AYSTDGHLIAKLHEADGASFRYENFNGKIGNSD---IHGNLAYVASQPRPKLSGALVSNQ 361

Query: 323 ESMHDLNETDFFEEEEKKNK 342
             M DL      +   K+  
Sbjct: 362 LLMADLAPLIGADSNAKQKA 381


>gi|188533461|ref|YP_001907258.1| putative assembly protein [Erwinia tasmaniensis Et1/99]
 gi|188028503|emb|CAO96365.1| AsmA suppressor of OmpF assembly mutants [Erwinia tasmaniensis
           Et1/99]
          Length = 614

 Score =  146 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 48/390 (12%), Positives = 107/390 (27%), Gaps = 54/390 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R +  L  L  VV+ G   + + ++  DFR     Q     G ++A  G ++ H+ P 
Sbjct: 1   MKRFITTLAILLVVVVSGMTALVMLVNPNDFRAYMVHQVEQRSGYRLAFNGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    I +              + +  + LPLLS ++ V  + +    +     S+  
Sbjct: 61  LSILSGPITVTAPGAQQPVVSASNMRLDVDLLPLLSHQLSVKQVMLKGAVIRLTQDSESQ 120

Query: 122 SNWFQ-----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
                               +       +  + +    +    Q + +   + DLNL + 
Sbjct: 121 RAADAPVGPAGSSAFSPADDVARGWKFDISHLRIADSLLVW-QQANGEQLNVRDLNLTLD 179

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                                            F    N   +   +S+   L    YP 
Sbjct: 180 QNQPR-----------------------QVHVEFSSRVNRDQRELHLSVSSDLDISNYPQ 216

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
            I+              S  + +         +E  A   +++  + I      ++   L
Sbjct: 217 RINASIQ----------SLDYQLKAVDLPPAGIEGKA---QMTARWDILTQRFSLNDILL 263

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKK 348
            +    + +        +      L    +      D  L  T+  +             
Sbjct: 264 NA----NDSQLSGTLSGTFGGRPELLADLHANHLDLDSLLGLTEVADGATNAAVQPGGHA 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKM 378
             I          +  +  + Q   + D++
Sbjct: 320 PVIARMPVTDNAHNVLNALDGQLTLAVDRL 349


>gi|205353263|ref|YP_002227064.1| assembly protein [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205273044|emb|CAR37992.1| putative outer membrane assembly protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|326628350|gb|EGE34693.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 618

 Score =  146 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E+D    + D+ L +   
Sbjct: 121 RSDDAPVAPRDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP   
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       +E    + +L   ++ +   +  +   L +
Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +      +V+  E+         ++   D
Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLQSSKLNLD 294


>gi|197264768|ref|ZP_03164842.1| protein AsmA [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|200387201|ref|ZP_03213813.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|207857556|ref|YP_002244207.1| assembly protein [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|197243023|gb|EDY25643.1| protein AsmA [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|199604299|gb|EDZ02844.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|206709359|emb|CAR33699.1| putative outer membrane assembly protein [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
          Length = 618

 Score =  146 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E+D    + D+ L +   
Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP   
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       +E    + +L   ++ +   +  +   L +
Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +      +V+  E+         ++   D
Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLQSSKLNLD 294


>gi|229505366|ref|ZP_04394876.1| AsmA protein [Vibrio cholerae BX 330286]
 gi|229510964|ref|ZP_04400443.1| AsmA protein [Vibrio cholerae B33]
 gi|229518085|ref|ZP_04407529.1| AsmA protein [Vibrio cholerae RC9]
 gi|229608385|ref|YP_002879033.1| AsmA protein [Vibrio cholerae MJ-1236]
 gi|229344800|gb|EEO09774.1| AsmA protein [Vibrio cholerae RC9]
 gi|229350929|gb|EEO15870.1| AsmA protein [Vibrio cholerae B33]
 gi|229357589|gb|EEO22506.1| AsmA protein [Vibrio cholerae BX 330286]
 gi|229371040|gb|ACQ61463.1| AsmA protein [Vibrio cholerae MJ-1236]
          Length = 749

 Score =  146 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 57/432 (13%), Positives = 126/432 (29%), Gaps = 56/432 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ I L  L  +++     + L ++   F+     QA    G  + ++G I     P 
Sbjct: 47  MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 106

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL  ++++ ++ +D    +      
Sbjct: 107 IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 166

Query: 120 GVSNWFQRKS-----------------------TMDMIHNVILEKIHVKGGRIKIIDQES 156
           G SN                                   ++ L  + V    ++I D+++
Sbjct: 167 GRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKA 226

Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197
                L D+ L     +   +         D  +    A+G                   
Sbjct: 227 GSHTKLYDVQLSVAEFVPDNWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 286

Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    N+  + K+  +    +KA +L   +   A  + ++  G+      Q I   
Sbjct: 287 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAISKV 346

Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                      +   L  S  K  L            +S   L  +  N+    D K  V
Sbjct: 347 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 404

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
           +  +   + F+ +  E   D       +E +     +         + N   E +     
Sbjct: 405 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSA 464

Query: 368 ENQENFSGDKMI 379
               + +G+  I
Sbjct: 465 LKALDVAGEISI 476


>gi|238912549|ref|ZP_04656386.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
          Length = 618

 Score =  146 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E+D    + D+ L +   
Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP   
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       +E    + +L   ++ +   +  +   L +
Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +      +V+  E+         ++   D
Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLRSSKLNLD 294


>gi|258626235|ref|ZP_05721082.1| asmA protein [Vibrio mimicus VM603]
 gi|258581287|gb|EEW06189.1| asmA protein [Vibrio mimicus VM603]
          Length = 704

 Score =  146 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 50/380 (13%), Positives = 115/380 (30%), Gaps = 56/380 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ + L  L  V++     + L ++   F+     QA    G  + ++G I     P 
Sbjct: 1   MKKLFLSLLGLVVVIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PL   ++++ ++++D    +      
Sbjct: 61  IGFELGKTELKNPQGFQSANLFKVESVGIDVSVMPLFDKQLKIGNIHLDGAEFHLETLKD 120

Query: 120 GVSNWFQR-----------------------KSTMDMIHNVILEKIHVKGGRIKIIDQES 156
           G SN                            S      ++ L  + V    ++I+D ++
Sbjct: 121 GRSNLDALTQAQSKQAALPAATESMPTPETTSSEPTAAWSIELGGVSVSNAVLEIVDHKA 180

Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197
                L D+ L     +   +   I     +  +    A+G                   
Sbjct: 181 GTQTKLYDVQLSVSEFMPDSWTKAIFAAKGNKDQQKFAAQGDAEVRLSADFKQYALRNIN 240

Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    N+  + K+  +    +KA +L   +   A  + ++  G+      + I   
Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAKGSASLMVDKAISKV 300

Query: 250 VFS--VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                      +   L  S  K  L            ++   L  +  N+    D K  V
Sbjct: 301 GLEGLKLEADLEGAALPQSPMKIGLDSQISFDLTKSHLNVL-LNKLTANA-LSFDGKADV 358

Query: 308 SQDEENLLNFSENGAESMHD 327
           +  +   + F+ +  E   D
Sbjct: 359 TLADIPKVRFNVHSPEIDLD 378


>gi|168818189|ref|ZP_02830189.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205345048|gb|EDZ31812.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|320086551|emb|CBY96322.1| Protein asmA Flags: Precursor [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 618

 Score =  146 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E+D    + D+ L +   
Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP   
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       +E    + +L   ++ +   +  +   L +
Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +      +V+  E+         ++   D
Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLQSSKLNLD 294


>gi|204929213|ref|ZP_03220356.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|204321757|gb|EDZ06956.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
          Length = 618

 Score =  146 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E+D    + D+ L +   
Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP   
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       +E    + +L   ++ +   +  +   L +
Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +      +V+  E+         ++   D
Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLQSSKLNLD 294


>gi|322615149|gb|EFY12071.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322617741|gb|EFY14637.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322624665|gb|EFY21496.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626884|gb|EFY23680.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322634070|gb|EFY30806.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322635739|gb|EFY32449.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322640257|gb|EFY36920.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322646326|gb|EFY42839.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649419|gb|EFY45855.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322656540|gb|EFY52829.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322661515|gb|EFY57739.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322665597|gb|EFY61781.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322667121|gb|EFY63288.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322671127|gb|EFY67255.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675232|gb|EFY71309.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322680841|gb|EFY76876.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322687016|gb|EFY82993.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323192780|gb|EFZ78007.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198789|gb|EFZ83888.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204920|gb|EFZ89911.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323208245|gb|EFZ93189.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323210946|gb|EFZ95807.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323215730|gb|EGA00473.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323221850|gb|EGA06252.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323223918|gb|EGA08215.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231175|gb|EGA15290.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323233610|gb|EGA17702.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323237680|gb|EGA21740.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245663|gb|EGA29657.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323247740|gb|EGA31682.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252956|gb|EGA36789.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323256758|gb|EGA40483.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323260023|gb|EGA43650.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323268247|gb|EGA51722.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323272192|gb|EGA55605.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 618

 Score =  146 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E+D    + D+ L +   
Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP   
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       +E    + +L   ++ +   +  +   L +
Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +      +V+  E+         ++   D
Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLQSSKLNLD 294


>gi|197249077|ref|YP_002147079.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197212780|gb|ACH50177.1| protein AsmA [Salmonella enterica subsp. enterica serovar Agona
           str. SL483]
          Length = 618

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E+D    + D+ L +   
Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP   
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       +E    + +L   ++ +   +  +   L +
Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +      +V+  E+         ++   D
Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLQSSKLNLD 294


>gi|168236280|ref|ZP_02661338.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194735691|ref|YP_002115209.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|194711193|gb|ACF90414.1| protein AsmA [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197290452|gb|EDY29807.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
          Length = 618

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E+D    + D+ L +   
Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP   
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       +E    + +L   ++ +   +  +   L +
Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +      +V+  E+         ++   D
Sbjct: 264 ----NDSSLTGHVQVTLAEQPEWQIDLQSSKLNLD 294


>gi|161502726|ref|YP_001569838.1| putative assembly protein [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160864073|gb|ABX20696.1| hypothetical protein SARI_00776 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 618

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTAQGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E+D+   + D++L +   
Sbjct: 121 RSDDAPIAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDEQVTVRDIHLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ ++S    +    YP   
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLSLSFNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       +E    + +    ++ +   +  +   L +
Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQFQAQWQEAQKRLSFNYLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +      +V+  E          A    D
Sbjct: 264 ----NDSSLTGHVQVTMAERPEWQIDLQSARLNLD 294


>gi|261211927|ref|ZP_05926213.1| AsmA protein [Vibrio sp. RC341]
 gi|260838535|gb|EEX65186.1| AsmA protein [Vibrio sp. RC341]
          Length = 703

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 53/380 (13%), Positives = 114/380 (30%), Gaps = 56/380 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ I L  L  +++     + L ++   F+     QA    G  + ++G I     P 
Sbjct: 1   MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL  ++++ ++ +D    +      
Sbjct: 61  IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120

Query: 120 GVSNWF-----------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQES 156
           G SN                            S      ++ L  + V    ++I D+++
Sbjct: 121 GRSNLDALTQAQSKPASTPATTEPVPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKA 180

Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197
                L D+ L     +   +         D  +    A+G                   
Sbjct: 181 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 240

Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    N+  + K+  +    +KA +L   +   A  + ++  G+      Q I   
Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAISKV 300

Query: 250 VFS--VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                      +   L  S  K  L            +S   L  +  N+    D K  V
Sbjct: 301 GLDELKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 358

Query: 308 SQDEENLLNFSENGAESMHD 327
           +  +   + F+ +  E   D
Sbjct: 359 TLADIPKVRFNLHSPEIDLD 378


>gi|224583391|ref|YP_002637189.1| assembly protein [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|224467918|gb|ACN45748.1| putative outer membrane assembly protein [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
          Length = 618

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 42/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E+D    + D+ L +   
Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP   
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       +E    + +L   ++ +   +  +   L +
Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +      +V+  ++         ++   D
Sbjct: 264 ----NDSSLTGHVQVTLADQPEWQIDLRSSKLNLD 294


>gi|148257369|ref|YP_001241954.1| hypothetical protein BBta_6121 [Bradyrhizobium sp. BTAi1]
 gi|146409542|gb|ABQ38048.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 1258

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 57/405 (14%), Positives = 148/405 (36%), Gaps = 44/405 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++  L+GL   F + L+ A   P F+DW  FR  FE +A+ I+G  + V G +   +LP 
Sbjct: 1   MQTTLLGLAIAFILALLAALIGPFFVDWNQFRPQFEAEASKIIGVPVRVAGALDARLLPT 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P++  + +            + + L +      L+ GE +  ++ I     +  L +KG 
Sbjct: 61  PTLRLRQVTFGGANHLGK-LRADKLDVEFSLGDLMRGEWKANELTIGGMAADLGLDAKGQ 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +          +  + +++ ++  GR+ + D  S     L+D+           +    
Sbjct: 120 VDLPAASGR-FNLAALAIDRFNLT-GRVALHDAASRSTLELTDI-----------VFSGD 166

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
           + S+ GS+  +G  +    R  F+++++   ++  + + + + P    +I D+ G + + 
Sbjct: 167 VRSLAGSLRGDGAVSIRGARFPFRVSSSQDKESGGLRVHLNIDPGERAVIADVEGLISFP 226

Query: 242 EKQPIYSGVFSVAG--------------------------DFSKLLNLELSAKKSRLSGN 275
            + P + G  +++                                  +   A   R++  
Sbjct: 227 NRSPRFEGALTLSSPPKEQGDGKDKLAAGDPAKPQSANPPSAKSSPAVAAGATPWRIAAK 286

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335
                   ++ + ++     + S        V      +L  + +  +   D   +   +
Sbjct: 287 VGGDQAAAKLDQIEVTFGEEDRSLKFTGSGDVRFGAAPMLRATLSARQLDADKLLSGGGD 346

Query: 336 EEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMIL 380
             +++          ++  + +        + +    FS ++++L
Sbjct: 347 VRDRRAMAPARVLPALRNWIAQLPTLPLPANVQ----FSTEQIML 387



 Score = 37.9 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 39/327 (11%), Positives = 85/327 (25%), Gaps = 21/327 (6%)

Query: 43  IVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRV 102
              + + ++G I +       V    ++    + GS + +I  ++  A     L   ++ 
Sbjct: 463 RTQRPLRLRGDISVAPD---RVAIDSLK-ADIDGGSVDGRIALITKAAGAGSRLETALKG 518

Query: 103 FDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI--------IDQ 154
             + +D         +     W    S    I    +    +     +         +DQ
Sbjct: 519 DRLDLDAALAVARSLAGASGEWPTEASVALDIGRAKISGQELSPLATRFSYDPKTIALDQ 578

Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214
                               +    L + S+ GS+    +                   +
Sbjct: 579 LKFGQSGGVSSEGSGRFDRADATGRLVLTSMAGSLKEITSLVQPIAPRIAARFDALSIPS 638

Query: 215 KAISLKIQLFPLAYPIIID-LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-- 271
            A  LK+ L     P  ++        +   P   G  ++    S               
Sbjct: 639 GAARLKLTLDLAKDPTNLERSQAKAVLDLDAPQLKGSATLTAKPSAAALRSFEVDAIDRT 698

Query: 272 ---LSGNFKISDGNVRISRYKLQSILP--NSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
              +        G++ ++   L       N     +     S      +N   +GA    
Sbjct: 699 ELGIESRLSSEQGHLVLALLGLDRFAAVGNGPAQFEASVSGSWRAPLRVNAKLSGAGLDG 758

Query: 327 DLNET-DFFEEEEKKNKNDDLKKDDIQ 352
           D   T + + E  K   N  L+  ++ 
Sbjct: 759 DAQGTIEPWGEFTKATANLRLRSANLA 785


>gi|62180692|ref|YP_217109.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161613198|ref|YP_001587163.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|62128325|gb|AAX66028.1| suppressor of ompF assembly mutants [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161362562|gb|ABX66330.1| hypothetical protein SPAB_00908 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|322715166|gb|EFZ06737.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 618

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 42/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E+D    + D+ L +   
Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP   
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       +E    + +L   ++ +   +  +   L +
Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +      +V+  ++         ++   D
Sbjct: 264 ----NDSSLTGHVQVTLADQPEWQIDLRSSKLNLD 294


>gi|168229444|ref|ZP_02654502.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|194472951|ref|ZP_03078935.1| protein AsmA [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194459315|gb|EDX48154.1| protein AsmA [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|205335755|gb|EDZ22519.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
          Length = 618

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 42/335 (12%), Positives = 104/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E+D    + D+ L +   
Sbjct: 121 RSDDAPVAPKDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP   
Sbjct: 180 AEHRGT-----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       +E    + +L   ++ +   +  +   L +
Sbjct: 214 -------HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +      +V+  ++         ++   D
Sbjct: 264 ----NDSSLTGHVQVTLADQPEWQIDLRSSKLNLD 294


>gi|153828173|ref|ZP_01980840.1| asmA protein [Vibrio cholerae 623-39]
 gi|148876415|gb|EDL74550.1| asmA protein [Vibrio cholerae 623-39]
          Length = 703

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 57/432 (13%), Positives = 127/432 (29%), Gaps = 56/432 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ I L  L  +++     + L ++   F+     QA    G  + ++G I     P 
Sbjct: 1   MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL  ++++ ++ +D    +      
Sbjct: 61  IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120

Query: 120 GVSNWFQRKS-----------------------TMDMIHNVILEKIHVKGGRIKIIDQES 156
           G SN                                   ++ L  + V    ++I D+++
Sbjct: 121 GRSNLDALTQAQSKPASAPATTDSAPASQPSLSEPTAAWSIELGGVSVSNAVLEITDKKA 180

Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197
                L D+ L     +   +         D  +    A+G                   
Sbjct: 181 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 240

Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    N+  + K+  +    +KA +L   +   A  + ++  G+      Q I   
Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAISKV 300

Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                      +   L  S  K  L            +S   L  +  N+ +  D K  V
Sbjct: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANAQS-FDGKADV 358

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
           +  +   + F+ +  E   D       +E +     +         + N   E +     
Sbjct: 359 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSA 418

Query: 368 ENQENFSGDKMI 379
               + +G+  I
Sbjct: 419 LKALDVAGEISI 430


>gi|119472048|ref|ZP_01614306.1| putative AsmA protein [Alteromonadales bacterium TW-7]
 gi|119445183|gb|EAW26475.1| putative AsmA protein [Alteromonadales bacterium TW-7]
          Length = 660

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 138/404 (34%), Gaps = 45/404 (11%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +L   G +  + +      P  I           +     G+ + + G   + + P 
Sbjct: 1   MKTLLKIFGVILLLCIALIVAAPFLIPTDTIFNKVSEEVQKTTGRTLTINGDKTLSVFPA 60

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +   D+     + GS    + ++ L++   +  L  GE ++    I++P +       
Sbjct: 61  LKLELNDVHFANMQTGSRADMASMQQLAVHIPWFSLFGGEFKLDKFVINEPDILLETDKN 120

Query: 120 GVSNWFQRKSTMDMI-------------------HNVILEKIHVKGGRIKIIDQESDQVY 160
           G +NW    +  +                      ++ L ++ + GG    +D ++    
Sbjct: 121 GKANWQLFDAVAEQPTEQPTEQTEPGEAIKLPASFDIKLGEVAIYGGTFTYLDGQTGAKQ 180

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            +SDL L I            + S++ ++  +G   +  +R    +  + PAK    +  
Sbjct: 181 QISDLELAI-----------LLPSLRKTLEVKGGVTYMQERFELDVKLDTPAKAIEGA-T 228

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS- 279
            ++       ++DL  N     +     G  +++GD  K L        +     F    
Sbjct: 229 FEVTQSLDSRLVDLTFNGSIARQGKDIKGELALSGDSVKELATWQGVDLNAKENAFNAFS 288

Query: 280 -DGNVRI--SRYKLQSILPN-SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335
            +G + +   ++ L+ +           K+++S    N L+ + N    M DLN   +  
Sbjct: 289 VNGKMHLLGEKFNLEELTATLDELQIKGKSEISLG--NRLDINANVDLGMLDLNP--YLP 344

Query: 336 EEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
           E   K +    ++     +       D   D      F+ + +I
Sbjct: 345 EAVAKQQAPQNEEPK---AAQPIVWDDTKIDLSALNAFNANVVI 385


>gi|206576558|ref|YP_002237500.1| AsmA protein [Klebsiella pneumoniae 342]
 gi|206565616|gb|ACI07392.1| AsmA protein [Klebsiella pneumoniae 342]
          Length = 615

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 47/385 (12%), Positives = 120/385 (31%), Gaps = 56/385 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+L  L  L +V++ G  ++ L ++  DFR     +     G ++ + G ++ H+ P 
Sbjct: 1   MRRILTTLMILLAVIVAGLTSLVLLVNPNDFRAYMVHEVAERSGYQLELDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS +++V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGAEEPVIRADNMRLDVALLPLLSHQLQVKQVMLKGAVIQLTPKTEAV 120

Query: 122 SNWFQ---------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
            +             ++  D   +  + ++ V    +     E+ +   + D+ LQ+   
Sbjct: 121 RDSAAPVVPHDNTLPQAPEDRGWSYDVRQLQVAD-SVLFFQHENGEQVTVRDIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP  +
Sbjct: 180 ENHRAT-----------------------VDFSGRINRDQRDLALSFSATVQGGDYPHAL 216

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
               +             + + G        +    +  L  +++     +R     L  
Sbjct: 217 KADFS----------QLSWQLRGAELP---PDGINGQGSLQASWQEDGKTLRFDNLNL-- 261

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDD 350
               S +       V   +    +   +      D  L  +    +     +     +  
Sbjct: 262 --MASGSTLTGNGSVVLGDRPDWSLDLHATTLNLDSLLAPSSPATDSSASQQGQSQTRPL 319

Query: 351 IQYSVNKKEEKDNSHDKENQENFSG 375
                +  E      D ++   F+G
Sbjct: 320 RPVIADSDER----EDYQSLRGFNG 340


>gi|153800930|ref|ZP_01955516.1| asmA protein [Vibrio cholerae MZO-3]
 gi|124123521|gb|EAY42264.1| asmA protein [Vibrio cholerae MZO-3]
          Length = 703

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 57/432 (13%), Positives = 126/432 (29%), Gaps = 56/432 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ I L  L  +++     + L ++   F+     QA    G  + ++G I     P 
Sbjct: 1   MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL  ++++ ++ +D    +      
Sbjct: 61  IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120

Query: 120 GVSNWFQRKS-----------------------TMDMIHNVILEKIHVKGGRIKIIDQES 156
           G SN                                   ++ L  + V    ++I D+++
Sbjct: 121 GRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKA 180

Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197
                L D+ L     +   +         D  +    A+G                   
Sbjct: 181 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 240

Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    N+  + K+  +    +KA +L   +   A  + ++  G+      Q I   
Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAAEMKLNAQGSASLMVNQAISKV 300

Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                      +   L  S  K  L            +S   L  +  N+    D K  V
Sbjct: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 358

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
           +  +   + F+ +  E   D       +E +     +         + N   E +     
Sbjct: 359 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSA 418

Query: 368 ENQENFSGDKMI 379
               + +G+  I
Sbjct: 419 LKALDVAGEISI 430


>gi|224371323|ref|YP_002605487.1| AsmA [Desulfobacterium autotrophicum HRM2]
 gi|223694040|gb|ACN17323.1| AsmA [Desulfobacterium autotrophicum HRM2]
          Length = 675

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 110/360 (30%), Gaps = 47/360 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  LI  G   +++L+    VP  +D   +R   E Q +   G+   + G + + + P+
Sbjct: 5   LKWSLIASGTFVALILLAILIVPRVVDVNSYRPQIEHQVSKATGRPFVLGGELDLSVFPW 64

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +   ++ +   E         I+   +R + LPL S  I+V    +D P +    ++ 
Sbjct: 65  MGLTLSNLTLGSPEGFDQKEFITIKRFEVRVKVLPLFSRTIQVKKFVVDTPQIFLVKNTT 124

Query: 120 GVSNWFQRKSTMDMIHN--------------------VILEKIHVKGGRIKIIDQESDQV 159
           G +NW   ++                           + +++  ++ GRI   D      
Sbjct: 125 GGTNWDMGQAQPPTPKQQPADKNTPAGEKAGALPFKALFVDEFAIQNGRIHYRDLGLKVT 184

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
             +S++ L +    L     +   +I         G                     I L
Sbjct: 185 KEISNVTLTLEDLNLEDPIKIKFSAIADGHPLSLNG--------LVGPIGKEPGRGMIPL 236

Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN---- 275
            I L  L   I + + G +      P +     ++    + L   L      L+ +    
Sbjct: 237 DITLKALDE-ITMKVKGGINDPITTPGFDLDLELSDFSPRKLLTALGNSTPILTADPRVL 295

Query: 276 --------FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
                    K   G V +S   L        +      +     +  L       +   D
Sbjct: 296 EHLQLNLHLKGDPGAVTVSNGTL----ILDDSTLTFSARAKDFSKPDLGVDMVVDKINLD 351


>gi|15641052|ref|NP_230684.1| asmA protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121587376|ref|ZP_01677146.1| asmA protein [Vibrio cholerae 2740-80]
 gi|153819382|ref|ZP_01972049.1| asmA protein [Vibrio cholerae NCTC 8457]
 gi|153822379|ref|ZP_01975046.1| asmA protein [Vibrio cholerae B33]
 gi|227081212|ref|YP_002809763.1| asmA protein [Vibrio cholerae M66-2]
 gi|254848168|ref|ZP_05237518.1| asmA protein [Vibrio cholerae MO10]
 gi|298498852|ref|ZP_07008659.1| asmA protein [Vibrio cholerae MAK 757]
 gi|9655503|gb|AAF94198.1| asmA protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121548379|gb|EAX58441.1| asmA protein [Vibrio cholerae 2740-80]
 gi|126510063|gb|EAZ72657.1| asmA protein [Vibrio cholerae NCTC 8457]
 gi|126520086|gb|EAZ77309.1| asmA protein [Vibrio cholerae B33]
 gi|227009100|gb|ACP05312.1| asmA protein [Vibrio cholerae M66-2]
 gi|254843873|gb|EET22287.1| asmA protein [Vibrio cholerae MO10]
 gi|297543185|gb|EFH79235.1| asmA protein [Vibrio cholerae MAK 757]
          Length = 703

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 57/432 (13%), Positives = 126/432 (29%), Gaps = 56/432 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ I L  L  +++     + L ++   F+     QA    G  + ++G I     P 
Sbjct: 1   MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL  ++++ ++ +D    +      
Sbjct: 61  IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120

Query: 120 GVSNWFQRKS-----------------------TMDMIHNVILEKIHVKGGRIKIIDQES 156
           G SN                                   ++ L  + V    ++I D+++
Sbjct: 121 GRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKA 180

Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197
                L D+ L     +   +         D  +    A+G                   
Sbjct: 181 GSHTKLYDVQLSVAEFVPDNWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 240

Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    N+  + K+  +    +KA +L   +   A  + ++  G+      Q I   
Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAISKV 300

Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                      +   L  S  K  L            +S   L  +  N+    D K  V
Sbjct: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 358

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
           +  +   + F+ +  E   D       +E +     +         + N   E +     
Sbjct: 359 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSA 418

Query: 368 ENQENFSGDKMI 379
               + +G+  I
Sbjct: 419 LKALDVAGEISI 430


>gi|294635544|ref|ZP_06714024.1| protein AsmA [Edwardsiella tarda ATCC 23685]
 gi|291091113|gb|EFE23674.1| protein AsmA [Edwardsiella tarda ATCC 23685]
          Length = 600

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/382 (13%), Positives = 115/382 (30%), Gaps = 51/382 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+L  L  L  VV  G   + L I+  DFR    +Q     G  + + G ++  + P 
Sbjct: 1   MRRLLTTLMILLVVVTAGLSALLLLINPNDFRAYMVKQVQQRTGYTLTLDGDLRWRVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +            + + +     PLLS ++ V  + +    +     S+  
Sbjct: 61  LSILTDHMSLRADGALQPLISADNMRLDVRLWPLLSHQLDVRQVMLKGAVIRLSPDSEPQ 120

Query: 122 SNWFQRKST-------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                  S         DM   + ++K+ V+   + I      +   L D+ L +     
Sbjct: 121 QVASAPSSPVARSEAISDMAWRLNIQKVKVED-SLVIWQPPEGEPINLRDIQLSLDQNAQ 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                       +F    N   ++  ++L+  +    YP     
Sbjct: 180 R-----------------------QVALSFSSRINRDQRDLLVNLEASVDLRHYPQQY-- 214

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                   +  I    +  +G       +   A +   S +++ +   V +S   L +  
Sbjct: 215 --------QAQISHFDYRYSGAGLPAAGI---AGQGSTSLSYQAAPATVTLSGLMLSA-- 261

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE-EEEKKNKNDDLKKDDIQY 353
             + +    +   +         +    +   D      ++  +    K D L       
Sbjct: 262 --NDSQLQGEIAATLGAHPDYRVTLRADKLNWD--ALSGWQGVDVAAAKEDALTSPPPSP 317

Query: 354 SVNKKEEKDNSHDKENQENFSG 375
            +++       ++     +FS 
Sbjct: 318 VISQVSAPIADNNLPFLRDFSA 339


>gi|258621819|ref|ZP_05716850.1| asmA protein [Vibrio mimicus VM573]
 gi|258586050|gb|EEW10768.1| asmA protein [Vibrio mimicus VM573]
          Length = 704

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/380 (12%), Positives = 115/380 (30%), Gaps = 56/380 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ + L  L  V++     + L ++   F+     QA    G  + ++G I     P 
Sbjct: 1   MKKLFLSLLGLVVVIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL  ++++ ++++D    +      
Sbjct: 61  IGFELGKTELKNPQGFQSANLFKVESVGIDVSVMPLLDKQLKIGNIHLDGAEFHLETLKD 120

Query: 120 GVSNWFQR-----------------------KSTMDMIHNVILEKIHVKGGRIKIIDQES 156
           G SN                            S      ++ L  + V    ++++D ++
Sbjct: 121 GRSNLDALTQAQSKQAAAPAATESTPTPEATSSEPTAAWSIELGGVSVSNAVLEMVDHKA 180

Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197
                L D+ L     +   +         +  +    A+G                   
Sbjct: 181 GTQTKLYDVQLSVSEFMPDSWTKATFAAKGNKDQQKFAAQGDAEVRLSADFKQYALRNIN 240

Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    N+  + K+  +    +KA +L   +   A  + ++  G+      + I   
Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAKGSASLMVDKAISKV 300

Query: 250 VFS--VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                      +   L  S  K  L            ++   L  +  N+    D K  V
Sbjct: 301 GLDGLKLEADLEGAALPQSPMKIGLDSQISFDLTKNHLNVL-LNKLTANA-LSFDGKADV 358

Query: 308 SQDEENLLNFSENGAESMHD 327
           +  +   + F+ +  E   D
Sbjct: 359 TLADIPKVRFNMHSPEIDLD 378


>gi|294503501|ref|YP_003567563.1| hypothetical protein YPZ3_1391 [Yersinia pestis Z176003]
 gi|262361544|gb|ACY58265.1| hypothetical protein YPD4_1357 [Yersinia pestis D106004]
 gi|262365717|gb|ACY62274.1| hypothetical protein YPD8_1591 [Yersinia pestis D182038]
 gi|294353960|gb|ADE64301.1| hypothetical protein YPZ3_1391 [Yersinia pestis Z176003]
          Length = 612

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 41/385 (10%), Positives = 111/385 (28%), Gaps = 58/385 (15%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68
           L  L  V++ G   + L ++  DFR    +Q     G  + ++G ++ H+ P  S+    
Sbjct: 2   LVILLIVLVAGMSALVLLVNPNDFRAYMVKQVEKKSGYHLQLEGDLRWHVWPQLSIIAGR 61

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR- 127
           + +            E + +  +  PLLS ++ V  + +    +     S+         
Sbjct: 62  MALTAPGALEPVVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLTPDSEAQQQIDAPV 121

Query: 128 ---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                      + +    + + ++ +    +     ++DQ   + D+NL++         
Sbjct: 122 APIAPAGSTPVSDNRGWTLDINRLQIADSLLIWQRSDNDQ-INVRDINLELK-------- 172

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
                           G     +       N   ++   S+ I      YP         
Sbjct: 173 ---------------QGGQRQVQVTLASRVNRNQRDLTFSMVIDADMHQYPRQFSAN--- 214

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
                  I    + + G       +        L  +++     + +++    +    ++
Sbjct: 215 -------ISQFTYKLEGADIPAGGISGGG---ALEASYQSDIQQLLLNQLNFTA----NN 260

Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV--- 355
                  K +  +      +        D      F  + K +     +      +    
Sbjct: 261 NQLAGSVKATFGDVPDYVVNLTSDNLNLD----AIFGWQPKSSTASTDEAKQPVTTAPVI 316

Query: 356 NKKEEKDNSHDKENQENFSGDKMIL 380
             + + D   + +   +F+    ++
Sbjct: 317 AIQIDDDVGQNLQALRDFTAQTTVV 341


>gi|229515421|ref|ZP_04404880.1| AsmA protein [Vibrio cholerae TMA 21]
 gi|229347190|gb|EEO12150.1| AsmA protein [Vibrio cholerae TMA 21]
          Length = 749

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/432 (13%), Positives = 128/432 (29%), Gaps = 56/432 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ I L  L  +++     + L ++   F+     QA    G  + ++G I     P 
Sbjct: 47  MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 106

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL  ++++ ++ +D    +      
Sbjct: 107 IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 166

Query: 120 GVSNWFQRKS-----------------------TMDMIHNVILEKIHVKGGRIKIIDQES 156
           G SN                                   ++ L  + V    ++I D+++
Sbjct: 167 GRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPTAAWSIELGGVSVSNAVLEITDKKA 226

Query: 157 DQVYFLSDLNLQI----SARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197
                L D+ L +      R+         D  +    A+G                   
Sbjct: 227 GSHTKLYDVQLSVAEFAPDRWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 286

Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    N+  + K+  +    +KA +L   +   A  + ++  G+      Q I   
Sbjct: 287 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVSGKAADMKLNAQGSASLMVNQAISKV 346

Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                      +   L  S  K  L            +S   L  +  N+    D K  V
Sbjct: 347 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 404

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
           +  +   + F+ +  E   D       +E +     +         + N   E +     
Sbjct: 405 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPALAKEAAASSSSAPAANAPAEVEPDLSA 464

Query: 368 ENQENFSGDKMI 379
            N  + +G+  I
Sbjct: 465 LNALDVAGEINI 476


>gi|157372979|ref|YP_001480968.1| AsmA family protein [Serratia proteamaculans 568]
 gi|157324743|gb|ABV43840.1| AsmA family protein [Serratia proteamaculans 568]
          Length = 678

 Score =  145 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/408 (10%), Positives = 116/408 (28%), Gaps = 43/408 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           +    +G +  +++       L  DW   +     + +  + +  A++G + +       
Sbjct: 6   KAFTWVGGIVLLIIAALVVFVLTFDWNRLKPTINDKVSAELHRPFAIRGDLGVDWSRDDK 65

Query: 57  ------HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P+P +  +D+ +   +   G    +++ +      L LL  ++ +  +++ 
Sbjct: 66  DIGGWRAWVPWPRIHAEDVVLGNPKNIPGDSMVQLQRVEASISPLALLGKQLLIPRIWLK 125

Query: 109 QPHLNFYLSSKGVSNWFQ----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
           QP+ +    + G +NW        +      +V +  I    G+I   D      +   +
Sbjct: 126 QPNASLQRLANGENNWTFNLAGDPNQPPSAWSVNIHDIVFDRGQIAFKDATLKADFRA-E 184

Query: 165 LNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKNKAIS 218
           ++        + ++                 +  G ++ +  +           +N  + 
Sbjct: 185 IDPLGKPLPFSEVTGKKDAGTTIPQDYIFGWKVKGKYNGEPLSGSGKIGGMLSLQNAEVP 244

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR------- 271
             +Q    +    + + G L               +GD    L                 
Sbjct: 245 FPLQADVRSGSTRVVVAGTLSDPMNLGGLDLRLKFSGDSLGNLYALTGVLLPNTPPYSTD 304

Query: 272 --LSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328
             L+       G V +  ++  +    +   D      V+      L+      +     
Sbjct: 305 GHLTARLHEKGGAVFQYQKFDGKIGDSDIHGDLK---YVAGKPRPTLSGEVLSKQLRF-- 359

Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376
              D        +      + +       K       D ++ +  + D
Sbjct: 360 --ADLAPLIGADSNTQKAGRGEKSRQPAGKVLPVEKFDTKSWKVMNAD 405


>gi|254419932|ref|ZP_05033656.1| AsmA family [Brevundimonas sp. BAL3]
 gi|196186109|gb|EDX81085.1| AsmA family [Brevundimonas sp. BAL3]
          Length = 643

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/338 (12%), Positives = 98/338 (28%), Gaps = 31/338 (9%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66
             G +  +++       +  DW   R    R A+    + IA++G + +H+  + PS   
Sbjct: 14  WAGGVGLLLIGIVVLALILFDWNMVRGPIGRWASAAYDRDIALQGDLDVHLFSWTPSAVV 73

Query: 67  KDIRIDQKEDGSFE--SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124
           + ++I   E       + ++ +        L +G+I +  +   +P L       G ++W
Sbjct: 74  RGLKIGGPEWARDRDTADVDEIRASVRLRKLFAGQIEMPLLSFTRPRLVLITDKDGRNSW 133

Query: 125 FQRKSTMDMIHNVI---LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                  D    +    ++++ +  GR+   ++        +             +    
Sbjct: 134 DLNPEKPDTGEGMKLPVIQQLVITDGRLVFDERRRGLKLEAT-------------VDARE 180

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240
                   + +G G  +      ++         +      +         +   G +  
Sbjct: 181 GQGDDAGFVLDGEGEVNGSPLTLRVRGGPFINIRRDRPYDFEASVSGAGSSLTAKGAVTR 240

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
                 +    S+ G     L L            RL G  K ++     S +  +    
Sbjct: 241 PFDLGRFDATLSLQGRDLSDLYLLTGVALPNTPPYRLKGALKRNENIWTFSDFDGRVGAS 300

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
           + S        V  D    L           D+++   
Sbjct: 301 DLS------GDVRVDAAKRLRVDAELTSRRLDIDDLAA 332


>gi|238895636|ref|YP_002920371.1| putative assembly protein [Klebsiella pneumoniae NTUH-K2044]
 gi|57753908|dbj|BAD86763.1| srppressor of ompF assembly mutants [Klebsiella pneumoniae]
 gi|238547953|dbj|BAH64304.1| suppressor of ompF assembly mutants [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 615

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/335 (12%), Positives = 107/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+L  L  L +V++ G  ++ L ++  DFR     +     G ++ + G ++ H+ P 
Sbjct: 1   MRRILTTLMILLAVIVAGLTSLVLLVNPNDFRAYMVHEVAERSGYQLDLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS +++V ++ +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGAEEPVIRADNMRLDVALLPLLSHQLQVKEVMLKGAVIQLTPKTEAV 120

Query: 122 ---------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +     +  D   +  + ++ V    +     E+ +   + D+ LQ+   
Sbjct: 121 RDSSAPVVPHDNTLPLAPEDRGWSYDVRQLQVAD-SVLFFQHENGEQVTVRDIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A++    +    YP  +
Sbjct: 180 ENHRAT-----------------------VDFSGRVNRDQRDLALNFSATVQGGDYPHSL 216

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                             + + G        +    +  L  +++  D  +R     L  
Sbjct: 217 KADFT----------QLSWQLRGAELP---PDGINGQGSLQASWQEDDKTLRFDNLNL-- 261

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +       V   +    +   +      D
Sbjct: 262 --MANRSTVTGSGSVVLGDRPDWSLDLHATTLDLD 294


>gi|71736320|ref|YP_276610.1| AsmA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71556873|gb|AAZ36084.1| AsmA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 723

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/381 (12%), Positives = 101/381 (26%), Gaps = 45/381 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    VVL     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 40  RKIFAWTGATLLVVLAILVIVLVTFDWNRIKPTLNEKVSEALHRPFAINGDLDVRWTREP 99

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   E         ++ +  R   LPLL+ ++ +  + + 
Sbjct: 100 ELGGWRAWVPSPHFVADDLTLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 159

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       V +  I    G +   DQ  +    + 
Sbjct: 160 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVVDIGAIKFDKGLVSFNDQTLNANLDVV 219

Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212
            ++L       + I                   +     TG +  ++ +           
Sbjct: 220 -IDLLGKPIPFSEIVGSKEAQKAQEKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLAL 278

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270
           K+ +    +Q           + G L   +          ++G     L           
Sbjct: 279 KDASQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 338

Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321
                 G         +  N R   +  +    +   D      V+      L+    + 
Sbjct: 339 PAYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSN 395

Query: 322 AESMHDLNETDFFEEEEKKNK 342
                DL      +    + K
Sbjct: 396 QLLFSDLAPLIGADSNAAQKK 416


>gi|310768044|gb|ADP12994.1| putative assembly protein [Erwinia sp. Ejp617]
          Length = 615

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/390 (12%), Positives = 112/390 (28%), Gaps = 54/390 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R +  L  L  VV+ G   + + ++  DFR    RQ     G  +A+ G ++ H+ P 
Sbjct: 1   MKRFITTLAILLVVVVAGMTALVMLVNPNDFRAYMVRQVEQRSGYHLALNGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +              + +    LPL S ++ V  + +    +     SK +
Sbjct: 61  LSILSGPVTLTAPGARQPVVSAANMRLDVNLLPLFSHQLSVKQVMLKGAVIRLTPDSKSL 120

Query: 122 S-----------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
                       + F     +       +  + +  G +    Q + +   + DL+L + 
Sbjct: 121 PPVNAPIGPAGSSTFSPTDDVARGWKFDISHLRIADGLLVW-QQSTGEQLNVRDLSLALD 179

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                                                 N   +   + L  +L    YP 
Sbjct: 180 QNQPR-----------------------QVHIEISSRINRDQRELQLDLSSELDITDYPQ 216

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
            +             +    + + G    L  ++  A   ++  N++   G   +    L
Sbjct: 217 RVK----------AIVQQLDYQLKGADLLLAGIQGKA---QMKANWESLTGRFSLEDIHL 263

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKK 348
            +    + +        +      L  + +      D  L  +   +++    +      
Sbjct: 264 SA----NDSQLSGTLSGTLGAHPELLANLHIGSIDLDSLLGLSGAMDQDALATEPRSGHA 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKM 378
             I             +  + Q   + D++
Sbjct: 320 PVIASVPVTDNVHSVLNALDGQLTLAVDQL 349


>gi|153824948|ref|ZP_01977615.1| asmA protein [Vibrio cholerae MZO-2]
 gi|149741460|gb|EDM55490.1| asmA protein [Vibrio cholerae MZO-2]
          Length = 703

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 58/432 (13%), Positives = 128/432 (29%), Gaps = 56/432 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ + L  L  V++     + L ++   F+     QA    G  + ++G I     P 
Sbjct: 1   MKKLFLSLLGLVVVIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K++ + +    +PL   ++++ ++ +D    +      
Sbjct: 61  IGFELGKTELKNPQGFASPNLFKVDSVGIDVSVMPLFDKQLKIGNIRLDGAEFHLETLKD 120

Query: 120 GVSNWF-----------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQES 156
           G SN                            S      ++ L  + V    ++I D+++
Sbjct: 121 GRSNLDALTQVQSKPAATPAATESAPTSQPGSSEPAAAWSIELGGVSVSNAVLEITDKKA 180

Query: 157 DQVYFLSDLNLQISAR----FLNIISPLSIDSIKGSVIAEGTGNF--------------- 197
                L D+ L +S      +         D  +    A+G                   
Sbjct: 181 GSHTKLYDVQLSVSEFAPESWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 240

Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    N+  + K+  +    +KA +L   +   A  + ++  G+      Q I   
Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMQLNAQGSASLMVNQAISKV 300

Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                      +   L  S  K  L            +S   L  +  N+    D K  V
Sbjct: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 358

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
           +  +   + F+ +  E   D       +E +     +         + N   E +     
Sbjct: 359 TLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPAANAPAEVEPDLSA 418

Query: 368 ENQENFSGDKMI 379
            N  + +G+  I
Sbjct: 419 LNALDVAGEISI 430


>gi|218662192|ref|ZP_03518122.1| hypothetical protein RetlI_23310 [Rhizobium etli IE4771]
          Length = 187

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 73/197 (37%), Positives = 106/197 (53%), Gaps = 11/197 (5%)

Query: 13  FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID 72
             V L  A   PLFIDWTDFR++FE QA+ I+GKK+ V G +   +LPFPSV   D+R+ 
Sbjct: 2   IVVALFVALLAPLFIDWTDFRKNFEDQASRIIGKKVTVHGTVDARLLPFPSVTLHDVRVG 61

Query: 73  QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMD 132
           Q+ DG+   K+E  SM AE  P LSGE  +FDM +  P +   L   G  +W +      
Sbjct: 62  QEADGTPIVKVEQFSMDAELAPFLSGEALIFDMRVVNPKVRLRLLKDGTLDWMRGSRAEI 121

Query: 133 MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE 192
               V+LE +HV GG ++ ID +S +   ++ LN ++SA+           S+ G    E
Sbjct: 122 PAKTVVLENVHVSGGEVEFIDDQSGRARRITGLNAEMSAK-----------SLAGPWRIE 170

Query: 193 GTGNFDNKRSAFKITAN 209
           G    D +   F I+++
Sbjct: 171 GDAALDGEHGNFSISSS 187


>gi|154252885|ref|YP_001413709.1| AsmA family protein [Parvibaculum lavamentivorans DS-1]
 gi|154156835|gb|ABS64052.1| AsmA family protein [Parvibaculum lavamentivorans DS-1]
          Length = 1146

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 56/339 (16%), Positives = 113/339 (33%), Gaps = 28/339 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +  +L  +  L  V+L  A   P  +DW  FR + E QA+    + +++ G I+  ILP 
Sbjct: 1   MNSILTYIAGLLVVLLFAALVGPSLVDWNQFRTEIETQASQAAARPVSIDGDIRFRILPA 60

Query: 62  PSVFFKDIRIDQKEDG------SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           P +    I+I    D          +  E +       PLLSG+I++  + I +P +N  
Sbjct: 61  PHLTLGKIKIGNDPDASSLPSDPHFATFEEIDAEMALAPLLSGDIQITSVRIVRPQINLE 120

Query: 116 LSSKGVSNW-------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
           +   G  NW          K  M  + ++ LEK   + G +   ++ + + +    +   
Sbjct: 121 VLPDGSVNWRGLNVASRIPKEGMFSLASISLEKASFENGTVNYRNRVNGRRWKAQQVQ-- 178

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
                      +   S+ G + +E      +   AF+I     A +KA  +  ++  L +
Sbjct: 179 ---------GSVIATSLLGPLRSEFEATIGDVPLAFRIGMGNFAGDKAFRVTTEMRTLDH 229

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
           P+     G            G   +                 R+     ++     +   
Sbjct: 230 PVKFLFSGVATDFSLAARLDGNGRLEVGAETDREDGTKTSPIRVDAGMVLNARRASLRNL 289

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
            + +             +   ++   +           D
Sbjct: 290 SVVA----DGAALRGSAEARWEQRPSMTLRLTAESFSLD 324


>gi|270486800|ref|ZP_06203874.1| AsmA family protein [Yersinia pestis KIM D27]
 gi|270335304|gb|EFA46081.1| AsmA family protein [Yersinia pestis KIM D27]
          Length = 450

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 40/385 (10%), Positives = 110/385 (28%), Gaps = 58/385 (15%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68
           L  L  V++ G   + L ++  DFR    +Q     G  + ++G ++ H+ P  S+    
Sbjct: 2   LVILLIVLVAGMSALVLLVNPNDFRAYMVKQVEKKSGYHLQLEGDLRWHVWPQLSIIAGR 61

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR- 127
           + +            E + +  +  PLLS ++ V  + +    +     S+         
Sbjct: 62  MALTAPGALEPVVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLTPDSEAQQQIDAPV 121

Query: 128 ---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                      + +    + + ++ +    +     ++DQ   + D+NL++         
Sbjct: 122 APIAPAGSTPVSDNRGWTLDINRLQIADSLLIWQRSDNDQ-INVRDINLELKQGGQR--- 177

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
                                 +       N   ++   S+ I      YP         
Sbjct: 178 --------------------QVQVTLASRVNRNQRDLTFSMVIDADMHQYPRQFSAN--- 214

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
                  I    + + G       +        L  +++     + +++    +    ++
Sbjct: 215 -------ISQFTYKLEGADIPAGGISGGG---ALEASYQSDIQQLLLNQLNFTA----NN 260

Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV--- 355
                  K +  +      +        D      F  + K +     +      +    
Sbjct: 261 NQLAGSVKATFGDVPDYVVNLTSDNLNLD----AIFGWQPKSSTASTDEAKQPVTTAPVI 316

Query: 356 NKKEEKDNSHDKENQENFSGDKMIL 380
             + + D   + +   +F+    ++
Sbjct: 317 AIQIDDDVGQNLQALRDFTAQTTVV 341


>gi|134096570|ref|YP_001101645.1| putative signal peptide [Herminiimonas arsenicoxydans]
 gi|133740473|emb|CAL63524.1| protein involved in outer membrane biogenesis asmA [Herminiimonas
           arsenicoxydans]
          Length = 673

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 42/324 (12%), Positives = 98/324 (30%), Gaps = 36/324 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           +++++      S +L       L  DW   R       +   G+  A+ G + +      
Sbjct: 5   KKIMLWSAIGSSALLFACVIFLLAFDWNHARPWINTHVSAATGRDFAINGDLALTWQRPQ 64

Query: 58  --------ILPFPSVFFKDIRIDQKED---GSFESKIEGLSMRAEFLPLLSGEIRVFDMY 106
                    +P P +   D+ +   +    G    ++  ++     LPLL+  I +  + 
Sbjct: 65  VSTGTWRDWVPVPRLSAHDVSLSNPDWSRSGPNMVEVGHITFSVNPLPLLNKTIVIPTLQ 124

Query: 107 IDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
           +D P +       G +NW   ++       + L+ +    G + + D+          + 
Sbjct: 125 LDDPIVKLERLRDGRNNWTFTQNAP-SAWTLDLQGLLFYKGEVSLKDE----------IK 173

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
              +   ++ + P + +         GT N        K  A    K+      +Q    
Sbjct: 174 HIDAKASIDTLQPSAANDFVMDWKLSGTFNGARISGDGKAGALLALKSVDKPFPLQARLN 233

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFK 277
                I + G++   +          ++G     L         +         L+G   
Sbjct: 234 VGKTSIRVKGSVTKPQDLAAIDMQLHLSGASMADLYPLTGITLPKTPEFSTEGHLTGTTN 293

Query: 278 ISDGNVRISRYKLQSILPNSSTDE 301
              G     +++ +    + S   
Sbjct: 294 ALGGKWTYDKFRGKVGESDISGTL 317


>gi|262171950|ref|ZP_06039628.1| AsmA protein [Vibrio mimicus MB-451]
 gi|261893026|gb|EEY39012.1| AsmA protein [Vibrio mimicus MB-451]
          Length = 704

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 49/380 (12%), Positives = 114/380 (30%), Gaps = 56/380 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ + L  L  V++     + L ++   F+     QA    G  + ++G I     P 
Sbjct: 1   MKKLFLSLLGLVVVIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL  ++++ ++++D    +      
Sbjct: 61  IGFELGKTELKNPQGFQSANLFKVESVGIDVSVMPLLDKQLKIGNIHLDGAEFHLETLKD 120

Query: 120 GVSNWFQRKSTMD-----------------------MIHNVILEKIHVKGGRIKIIDQES 156
           G SN                                   ++ L  + V    ++I+D ++
Sbjct: 121 GRSNLDALTQAQSKQAAAPAATESTPTPETTSSEPTAAWSIELGGVSVSNAVLEIVDHKA 180

Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197
                L D+ L     +   +         +  +    A+G                   
Sbjct: 181 GTQTKLYDVQLSVSEFMPDSWTKATFAAKGNKDQQKFAAQGDAEVRLSADFKQYALRNIN 240

Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    N+  + K+  +    +KA +L   +   A  + ++  G+      + I   
Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAKGSASLMVDKAISKV 300

Query: 250 VFS--VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                      +   L  S  K  L            ++   L  +  N+    D K  V
Sbjct: 301 GLEGLKLEADLEGAALPQSPMKIGLDSQISFDLTKSHLNVL-LNKLTANA-LSFDGKADV 358

Query: 308 SQDEENLLNFSENGAESMHD 327
           +  +   + F+ +  E   D
Sbjct: 359 TLADIPKVRFNVHSPEIDLD 378


>gi|332533205|ref|ZP_08409072.1| protein AsmA [Pseudoalteromonas haloplanktis ANT/505]
 gi|332037284|gb|EGI73739.1| protein AsmA [Pseudoalteromonas haloplanktis ANT/505]
          Length = 656

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 56/352 (15%), Positives = 134/352 (38%), Gaps = 38/352 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +L  +G +  + +      P  I           Q     G+ + +KG   + + P 
Sbjct: 1   MKTLLKIVGVILLLCIALIVAAPFLIPTDTIFNKVSEQVEQTTGRTLTIKGDKTLSVFPA 60

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +   D+     E GS    + ++ L++   +  L  GE ++    I++P++       
Sbjct: 61  LKLELNDVHFANMESGSRADMASMKQLAVHIPWFSLFGGEFKLDKFVINEPNILLETDKN 120

Query: 120 GVSNWFQRKSTMDMI---------------HNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
           G +NW    +  +                  ++ L ++ + GG    +D ++     +SD
Sbjct: 121 GKANWQLFDAVAEQPKEQSQPGEAIKLPDNFDIELGEVAIYGGTFTYLDGQTGAKQQVSD 180

Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
           L L I            + S++ ++  +G   +  +R    I  + PAK    +    + 
Sbjct: 181 LELAI-----------LLPSLRKTLEVKGGITYMQERFDLDIKLDTPAKAIEGA-TFNVK 228

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS----KLLNLELSAKKSRLSGNFKISD 280
                 ++DL       ++     G  +++G+      K   +EL AK +  +G F ++ 
Sbjct: 229 QTLDSRLVDLTFEGSIAKQGQDIKGQLALSGESVKSIAKWQGVELDAKDNAFNG-FSVNG 287

Query: 281 G-NVRISRYKLQSILPN-SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330
             ++   ++ L+ ++    + +   K++++  +   L  + +    M DLN 
Sbjct: 288 KMHLLGEKFNLEDLVATLDALEIKGKSELNLGK--RLAVNADIDLGMLDLNP 337


>gi|152972383|ref|YP_001337529.1| hypothetical protein KPN_03875 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150957232|gb|ABR79262.1| hypothetical protein KPN_03875 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 683

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 49/406 (12%), Positives = 108/406 (26%), Gaps = 45/406 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56
           R+ L+ +     +++V  F V    DW   +    ++ +  + +  A++G + +      
Sbjct: 5   RKTLVIITGTILLLIVLFFIVLATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQP 64

Query: 57  ------HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P+P V  +DI +             +  +      L LLS  + +  + ++
Sbjct: 65  DERGWRSWIPWPHVHAEDIVLGNPPAIPQVTMIHLPRVEATLAPLALLSKTVYLPWIKLE 124

Query: 109 QPHLNFYLSSKGVSNWFQR--------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           QP +     ++  +NW  +          +     +  L+ I    G I I D+ +    
Sbjct: 125 QPDVRLIRLAEDNNNWTFQLAGDKRTSGDSAPSSWSFRLDNILFDRGTIAIDDKITRSDI 184

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKN 214
            +    L     F  +       S              G +  +              ++
Sbjct: 185 TILVDPLGKPLPFSEVTGTKDRHSAAKPGDYVFGLSLKGRYKGQPVTGNGKIGGMLALRS 244

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270
            +    +Q    +    +   G +               AGD  + L             
Sbjct: 245 ASAPFPLQGDFHSGNTRVAFSGTVSDPLNVGGIDLRLKFAGDSLRDLYDLTGVLLPETPS 304

Query: 271 -----RLSGNFKISDG-NVRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAE 323
                RL  +F   +        +  +    +           +       L+      +
Sbjct: 305 FSTDGRLRADFTQKNRMRFNYQNFNGRIGDSD----IHGSLTYTTGKPRPKLSGDMESKQ 360

Query: 324 SMH-DLNET-DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
               DL         +  K        D  Q +           DK
Sbjct: 361 LRLADLGPLIGVDSGKGTKKSASRQAGDRPQPAGKVLPADRFETDK 406


>gi|330001968|ref|ZP_08304140.1| AsmA family protein [Klebsiella sp. MS 92-3]
 gi|328537517|gb|EGF63746.1| AsmA family protein [Klebsiella sp. MS 92-3]
          Length = 615

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 41/335 (12%), Positives = 106/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+L  L  L +V++ G  ++ L ++  DFR     +     G ++ + G ++ H+ P 
Sbjct: 1   MRRILTTLMILLAVIVAGLTSLVLLVNPNDFRAYMVHEVAERSGYQLDLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS +++V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGAEEPVIRADNMRLDVALLPLLSHQLQVKQVMLKGAVIQLTPKTEAV 120

Query: 122 ---------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +     +  D   +  + ++ V    +     E+ +   + D+ LQ+   
Sbjct: 121 RDSSAPVVPHDNTLPLAQEDRGWSYDVRQLQVAD-SVLFFQHENGEQVTVRDIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A++    +    YP  +
Sbjct: 180 ENHRAT-----------------------VDFSGRVNRDQRDLALNFSATVQGGDYPHSL 216

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                             + + G        +    +  L  +++  D  +R     L  
Sbjct: 217 KADFT----------QLSWQLRGAELP---PDGINGQGSLQASWQEDDKTLRFDNLNL-- 261

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +       V   +    +   +      D
Sbjct: 262 --MANRSTVTGSGSVVLGDRPDWSLDLHATTLDLD 294


>gi|197104603|ref|YP_002129980.1| AsmA family membrane protein [Phenylobacterium zucineum HLK1]
 gi|196478023|gb|ACG77551.1| AsmA family membrane protein [Phenylobacterium zucineum HLK1]
          Length = 634

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 90/316 (28%), Gaps = 27/316 (8%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDG--SF 79
           +    DW  FR   ER A+  + +++++ G + + +  + P    + +RI          
Sbjct: 2   LVAIWDWNWFRGPVERIASARLNREVSIAGDLDVRLWSWQPRATVEGVRIANAPWAGRDP 61

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV-I 138
               E ++++   +PLL G + +  +  D+P L  Y  ++G  NW            +  
Sbjct: 62  LGTFEKITVQIRLVPLLWGNVDLRLLRFDRPELRLYADARGRRNWDFSDGRKKEPMRLPP 121

Query: 139 LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD 198
           +    V  GR+  +D +        DL  + +      +   S           G G  +
Sbjct: 122 IRSFIVADGRMSYLDVK-------RDLRFEGTINAAETLGDRSRG-----FELVGQGTIN 169

Query: 199 NKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257
            +    ++T        +           A    I   G +        +    +  G  
Sbjct: 170 RQPFRMEVTGGPLVNIERDRPYPFNAEIRAGRTYITANGAVPKPFDLGRFHMFTTARGPD 229

Query: 258 SKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD-E 311
              L               L G     +   RI     +    +         KV     
Sbjct: 230 LSDLYPLTGVALPNTPPYSLRGRLSRDELVWRIDNLGGRVGDSD----LAGDIKVETGRT 285

Query: 312 ENLLNFSENGAESMHD 327
             +            D
Sbjct: 286 RPMFEADLRSRSLDFD 301


>gi|114799535|ref|YP_760141.1| AsmA family protein [Hyphomonas neptunium ATCC 15444]
 gi|114739709|gb|ABI77834.1| AsmA family protein [Hyphomonas neptunium ATCC 15444]
          Length = 947

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 118/346 (34%), Gaps = 35/346 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R  +  G + +++LVG  TVP  +    +R   ER AT  + ++I + G +KI I P 
Sbjct: 3   IKRAGLIAGGIVALLLVGLVTVPFLVPKEVYRAQIERAATQALQRQITLTGDVKISIFPS 62

Query: 62  PSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            +     + +   E   G +  +   L      +PLLS  + V ++      ++    + 
Sbjct: 63  IAASVGGVTVANPEGFDGPYMVEAGELRGSVRLMPLLSRRVEVKELAFVDARVSLQKLAN 122

Query: 120 GVSNWFQRKSTMDMIHNVI-----------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
           G +NW    +                    +E+  ++   +   D E+ + Y L DL+L 
Sbjct: 123 GQTNWVFTPAEPTQPAPTRPAGEQKGFNGGVEQARLENASLTYRDGETGEYYELRDLDLL 182

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF-PAKNKAISLKIQLFPLA 227
                       S+ S       +  G F         T +   A  K +   I+     
Sbjct: 183 -----------ASMASTDEPFRLKAKGFFQAHAFEINSTVDTIDALTKELPADIKADLDT 231

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA---------KKSRLSGNFKI 278
               +   G++      P+ SG F  + D    L     A          K  L G+ + 
Sbjct: 232 TFGKVHYAGSVKL-GTIPVISGQFRASSDSLPQLAALTGADVPFDLSKLGKINLEGSLEG 290

Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
               +R+   KL      + T    +  +S+        S +    
Sbjct: 291 PANALRVDIEKLTQTSDLARTSFAGQLNLSETPTISGELSLDAPSL 336


>gi|238896973|ref|YP_002921718.1| hypothetical protein KP1_5215 [Klebsiella pneumoniae NTUH-K2044]
 gi|238549300|dbj|BAH65651.1| hypothetical protein KP1_5215 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 683

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 49/406 (12%), Positives = 108/406 (26%), Gaps = 45/406 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56
           R+ L+ +     +++V  F V    DW   +    ++ +  + +  A++G + +      
Sbjct: 5   RKTLVIITGTILLLIVLFFIVLATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQP 64

Query: 57  ------HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P+P V  +DI +             +  +      L LLS  + +  + ++
Sbjct: 65  DERGWRSWIPWPHVHAEDIVLGNPPAIPQVTMIHLPRVEATLAPLALLSKTVYLPWIKLE 124

Query: 109 QPHLNFYLSSKGVSNWFQR--------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           QP +     ++  +NW  +          +     +  L+ I    G I I D+ +    
Sbjct: 125 QPDVRLIRLAEDNNNWTFQLAGDKRASGDSAPSSWSFRLDNILFDRGTIAIDDKITRSDI 184

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKN 214
            +    L     F  +       S              G +  +              ++
Sbjct: 185 TILVDPLGKPLPFSEVTGTKDRHSAAKPGDYVFGLSLKGRYKGQPVTGNGKIGGMLALRS 244

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270
            +    +Q    +    +   G +               AGD  + L             
Sbjct: 245 ASAPFPLQGDFHSGNTRVAFSGTVSDPLNVGGIDLRLKFAGDSLRDLYDLTGVLLPETPS 304

Query: 271 -----RLSGNFKISDG-NVRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAE 323
                RL  +F   +        +  +    +           +       L+      +
Sbjct: 305 FSTDGRLRADFTQKNRMRFNYQNFNGRIGDSD----IHGSLTYTTGKPRPKLSGDMESKQ 360

Query: 324 SMH-DLNET-DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
               DL         +  K        D  Q +           DK
Sbjct: 361 LRLADLGPLIGVDSGKGTKKSASRQAGDRPQPAGKVLPADRFETDK 406


>gi|330892480|gb|EGH25141.1| AsmA family protein [Pseudomonas syringae pv. mori str. 301020]
          Length = 451

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 49/381 (12%), Positives = 102/381 (26%), Gaps = 45/381 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    VVL     V +  DW   +     +A+  + +  A+ G + +      
Sbjct: 5   RKIFAWTGATLLVVLAILVIVLVTFDWNRIKPTLNEKASEALHRPFAINGDLDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   E         ++ +  R   LPLL+ ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLTLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       V +  I    G +   DQ  +    + 
Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVVDIGAIKFDKGLVSFNDQTLNANLDVV 184

Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212
            ++L       + I                   +     TG +  ++ +           
Sbjct: 185 -IDLLGKPIPFSEIVGSKEAQKAQEKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLAL 243

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270
           K+ +    +Q           + G L   +          ++G     L           
Sbjct: 244 KDASQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303

Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321
                 G         +  N R   +  +    +   D      VS      L+    + 
Sbjct: 304 PAYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYVSSQPRPKLSGVLVSN 360

Query: 322 AESMHDLNETDFFEEEEKKNK 342
                DL      +    + K
Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381


>gi|329999260|ref|ZP_08303391.1| AsmA family protein [Klebsiella sp. MS 92-3]
 gi|328538362|gb|EGF64495.1| AsmA family protein [Klebsiella sp. MS 92-3]
          Length = 643

 Score =  143 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 49/406 (12%), Positives = 108/406 (26%), Gaps = 45/406 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56
           R+ L+ +     +++V  F V    DW   +    ++ +  + +  A++G + +      
Sbjct: 5   RKTLVIITGTILLLIVLFFIVLATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQP 64

Query: 57  ------HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P+P V  +DI +             +  +      L LLS  + +  + ++
Sbjct: 65  DERGWRSWIPWPHVHAEDIVLGNPPAIPQVTMIHLPRVEATLAPLALLSKTVYLPWIKLE 124

Query: 109 QPHLNFYLSSKGVSNWFQR--------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           QP +     ++  +NW  +          +     +  L+ I    G I I D+ +    
Sbjct: 125 QPDVRLIRLAEDNNNWTFQLAGDKRTSGDSAPSSWSFRLDNILFDRGTIAIDDKITRSDI 184

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKN 214
            +    L     F  +       S              G +  +              ++
Sbjct: 185 TILVDPLGKPLPFSEVTGTKDRHSAAKPGDYVFGLSLKGRYKGQPVTGNGKIGGMLALRS 244

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270
            +    +Q    +    +   G +               AGD  + L             
Sbjct: 245 ASAPFPLQGDFHSGNTRVAFSGTVSDPLNVGGIDLRLKFAGDSLRDLYDLTGVLLPETPS 304

Query: 271 -----RLSGNFKISDG-NVRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAE 323
                RL  +F   +        +  +    +           +       L+      +
Sbjct: 305 FSTDGRLRADFTQKNRMRFNYQNFNGRIGDSD----IHGSLSYTTGKPRPKLSGDMESKQ 360

Query: 324 SMH-DLNET-DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
               DL         +  K        D  Q +           DK
Sbjct: 361 LRLADLGPLIGVDSGKGTKKSASRQAGDRPQPAGKVLPADRFETDK 406


>gi|302189363|ref|ZP_07266036.1| AsmA [Pseudomonas syringae pv. syringae 642]
          Length = 688

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 46/381 (12%), Positives = 103/381 (27%), Gaps = 45/381 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    VVL     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIFAWTGATLLVVLAILVIVIVTFDWNRIKPTLNEKVSEALHRPFAINGDLDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   E         ++ +  R   LPLL+ ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLSLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       + +  I    G +   DQ+ +    + 
Sbjct: 125 GPEARLERLADGRANWVFDLPKSDPNAEPSKWVMDIGAIKFDKGLVSFNDQKLNANLDVV 184

Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212
            ++L       + I+                  +     TG +  ++ +           
Sbjct: 185 -IDLLGKPIPFSEIAGSKEAKKAQDKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLAL 243

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270
           K+ +    +Q           + G L   +          ++G     L           
Sbjct: 244 KDSSQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303

Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321
                 G         +  N R   +  +    +   D      V+      L+    + 
Sbjct: 304 PAYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GFVASQPRPKLSGVLVSN 360

Query: 322 AESMHDLNETDFFEEEEKKNK 342
                DL      +    + K
Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381


>gi|291618061|ref|YP_003520803.1| AsmA [Pantoea ananatis LMG 20103]
 gi|291153091|gb|ADD77675.1| AsmA [Pantoea ananatis LMG 20103]
          Length = 608

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 44/333 (13%), Positives = 99/333 (29%), Gaps = 47/333 (14%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M+RRV+  L  L  VV+ G   + + ++  DFR    +Q     G ++ + G ++ H+ P
Sbjct: 1   MMRRVITTLAILLVVVVAGLTALVMLVNPNDFRSYMVQQVEQRSGYQLTINGDLRWHVWP 60

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             S+    + +            + + +    LPLLS ++ V  + +    +     S  
Sbjct: 61  KLSILAGRMSLTAPGAAQPVVSADNMRLDVNLLPLLSHQLSVSQVMLKNAVVRVTPDSTA 120

Query: 121 VSNWFQR------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                        +       +  + K+ +               +   +LNL +     
Sbjct: 121 QVPQNAPRGPHNSEPASSDRWSFDIGKLQLMDSLFIWQQP-GGDAFTFRNLNLNMEQDQS 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
           ++ +                            +     +   I+LK Q     YP  +  
Sbjct: 180 SLAT-----------------------INLSTSLTRNQRTAMINLKGQFDKSQYPHQLSG 216

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                           ++++G       ++ +       GN+      V +S  KL +  
Sbjct: 217 QLE----------QLDYALSGASLPPQGIKGTL---SFQGNWNGDRNTVALSDLKLNA-- 261

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
             + +      +        L+   +      D
Sbjct: 262 --NDSVLSGSAQGDLTAPQKLSLDLHATSLNMD 292


>gi|283785884|ref|YP_003365749.1| outer membrane assembly protein [Citrobacter rodentium ICC168]
 gi|282949338|emb|CBG88949.1| putative outer membrane assembly protein [Citrobacter rodentium
           ICC168]
          Length = 616

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 40/335 (11%), Positives = 99/335 (29%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRSYMVQQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++  
Sbjct: 61  LSILSGRMALTAEGASEPLVRADNMRLDVALWPLLSHQLSVKQVMLKGAVIQLTPQTEAA 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E D+   + D+ L++   
Sbjct: 121 RGEDAPVAPKDNNLPDVAEDRGWSFDIASLRVADSVLVF-QHEDDEQVTVRDIRLKMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++  ++    +    YP  +
Sbjct: 180 KQHRGT-----------------------FEFSGRINRDQRDLNLAFSGTVDASDYPHNL 216

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                        I    + + G       ++   +              +  S+  L +
Sbjct: 217 S----------AAISQLSWQLQGADLPKQGIQGQGQLQAQWQE---EQKTLSFSQLNLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +      +V+  E+       N      D
Sbjct: 264 ----NDSTLTGSAQVALAEQPTWRIDLNFPRLNLD 294


>gi|323700177|ref|ZP_08112089.1| AsmA family protein [Desulfovibrio sp. ND132]
 gi|323460109|gb|EGB15974.1| AsmA family protein [Desulfovibrio desulfuricans ND132]
          Length = 686

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 123/359 (34%), Gaps = 44/359 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  LI +G L ++ +     + L +D  D++    +      G+++  +G I  +  P+
Sbjct: 5   LKISLIVVGALAALFVTACIVLVLVVDPNDYKVQISQAVKDRTGRELKFEGDIGFNFFPW 64

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    + +      +     +I         LPLLSG++ V  + +D   LN   + +
Sbjct: 65  LGLKVGPMALGNAPGFAPDEMVRINRAEASIRLLPLLSGDVAVGTVVLDGLTLNLARNKQ 124

Query: 120 GVSNWFQ-------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           G +NW                       +      ++ +E + + G  I   D+++    
Sbjct: 125 GATNWDDLAKGGEAGKAEAETATGSESPAESGSAPSLSVEGVEITGANIVYDDRQAGTRT 184

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            ++DL+L I A    I               +     D+ +   +      A+    +  
Sbjct: 185 TVNDLSLIIGAVGDKIRF---------PFELKFRLKLDSPKVDTRPVLIGFARFDQEAGS 235

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQP---IYSGVFSVAGDFSKLLNLELSAKKS------- 270
           I++  + + ++      L + + +     +S    +A    + L  +L            
Sbjct: 236 IEVDDMEFSLLNLKLTGLLFAKSKADDTSFSAELKLAPASVRELMKQLGLTPPETADPKV 295

Query: 271 --RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
              LS + K++  + + +   L        T    +  V   ++  +  + N  +   D
Sbjct: 296 LENLSADLKVNGSDTQATLESLTV--KLDQTLLTAEGAVKNFKKPAVTLNANVDDIDAD 352


>gi|66047676|ref|YP_237517.1| AsmA [Pseudomonas syringae pv. syringae B728a]
 gi|63258383|gb|AAY39479.1| AsmA [Pseudomonas syringae pv. syringae B728a]
 gi|330969728|gb|EGH69794.1| AsmA [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 688

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 102/381 (26%), Gaps = 45/381 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    VVL     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIFAWTGATLLVVLAILVIVIVTFDWNRIKPTLNAKVSEALHRPFAINGDLDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   E         ++ +  R   LPLL+ ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLSLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       + +  I    G +   DQ+ +    + 
Sbjct: 125 GPEARLERLADGRANWVFDLPKSDPNAEPSKWVMDIGAIKFDKGLVSFNDQKLNANLDVV 184

Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212
            ++L       + I                   +     TG +  ++ +           
Sbjct: 185 -IDLLGKPVPFSEIVGSKEAQKAQEKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLAL 243

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270
           K+ +    +Q           + G L   +          ++G     L           
Sbjct: 244 KDASQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303

Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321
                 G         +  + R   +  +    +   D      V+      L+    + 
Sbjct: 304 PAYSTDGRLIAKLHDPAGASFRYEGFNGKIGNSDIHGDL---GFVASQPRPKLSGVLVSN 360

Query: 322 AESMHDLNETDFFEEEEKKNK 342
                DL      +    + K
Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381


>gi|330988208|gb|EGH86311.1| AsmA family protein [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 688

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 47/381 (12%), Positives = 101/381 (26%), Gaps = 45/381 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    VVL     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIFAWTGATLLVVLAILVIVLVTFDWNRIKPTLNEKVSEALHRPFAINGDLDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   E         ++ +  R   LPLL+ ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLTLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       V +  I    G +   DQ  +    + 
Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVVDIGAIKFDKGLVSFNDQTLNANLDVV 184

Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212
            ++L       + I                   +     TG +  ++ +           
Sbjct: 185 -IDLLGKPIPFSEIVGSKEAQKAQEKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLAL 243

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270
           K+ +    +Q           + G L   +          ++G     L           
Sbjct: 244 KDASQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303

Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321
                 G         +  N R   +  +    +   D      V+      L+    + 
Sbjct: 304 PAYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSN 360

Query: 322 AESMHDLNETDFFEEEEKKNK 342
                DL      +    + K
Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381


>gi|298488902|ref|ZP_07006926.1| exported protein, conserved [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298156577|gb|EFH97673.1| exported protein, conserved [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 688

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/381 (12%), Positives = 100/381 (26%), Gaps = 45/381 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    VVL     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIFAWTGATLLVVLAILVIVLVTFDWNRIKPTLNEKVSEALHRPFAINGDLDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   E         ++ +  R   LPLL+ ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLTLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       V +  I    G +   DQ  +    + 
Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVVDIGAIKFDKGLVSFNDQTLNANLDVV 184

Query: 164 DLNLQISARFLNIISPLSIDSIKGS---------VIAEGTGNFDNKRSAFKITAN--FPA 212
            ++L       + I                         TG +  ++ +           
Sbjct: 185 -IDLLGKPIPFSEIVGSKEAQKAQKKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLAL 243

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270
           K+ +    +Q           + G L   +          ++G     L           
Sbjct: 244 KDASQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303

Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321
                 G         +  N R   +  +    +   D      V+      L+    + 
Sbjct: 304 PAYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSN 360

Query: 322 AESMHDLNETDFFEEEEKKNK 342
                DL      +    + K
Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381


>gi|300717521|ref|YP_003742324.1| AsmA suppressor of OmpF assembly mutants [Erwinia billingiae Eb661]
 gi|299063357|emb|CAX60477.1| AsmA suppressor of OmpF assembly mutants [Erwinia billingiae Eb661]
          Length = 614

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 44/334 (13%), Positives = 93/334 (27%), Gaps = 49/334 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR +  L  L  V++ G   + L ++  DFR    +Q     G ++A+ G ++ H+ P 
Sbjct: 1   MRRFITTLAILLVVIVAGMTALVLLVNPNDFRGYMAQQVEQRSGYRLALNGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +              + +    LPL+S ++ V  + +     N    S+  
Sbjct: 61  LSILSGQMTLTAPGAKQPVVSASNMRLDVSLLPLISHQLSVKQVMLKGAVFNLTPDSEAQ 120

Query: 122 SNWFQRKSTMDM--------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
                                    + ++ +    +      + +   L DLNLQ+S   
Sbjct: 121 RPANAPVGPAGNNPDEGVTHGWKFDIAELRIADSLLIWQQD-NGEQLNLRDLNLQLSQDS 179

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
                                              N   +   ++L   L    YP  + 
Sbjct: 180 KR-----------------------QAHIELSSRINRDQRELLLNLNSDLDVSRYPQHLT 216

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
              N             + + G       L+      ++   +   +    +    L + 
Sbjct: 217 AAIN----------QLDYQMTGADLPKDGLKGQM---KMQAEWAGDNQAFSLKNLSLTA- 262

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
              + +  D            LN   +      D
Sbjct: 263 ---NDSQLDGSASGMLGARPQLNVDLHSPLLNMD 293


>gi|289629154|ref|ZP_06462108.1| AsmA family protein [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289647777|ref|ZP_06479120.1| AsmA family protein [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330869921|gb|EGH04630.1| AsmA family protein [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 688

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/381 (12%), Positives = 101/381 (26%), Gaps = 45/381 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    VVL     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIFAWTGATLLVVLAILVIVLVTFDWNRIKPTLNEKVSEALHRPFAINGDVDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   E         ++ +  R   LPLL+ ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLTLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       V +  I    G +   DQ  +    + 
Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVVDIGAIKFDKGLVSFNDQTLNANLDVV 184

Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212
            ++L       + I                   +     TG +  ++ +           
Sbjct: 185 -IDLLGKPIPFSEIVGSKEAQKAQEKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLAL 243

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270
           K+ +    +Q           + G L   +          ++G     L           
Sbjct: 244 KDASQPFPVQADVKVGDTHALIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303

Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321
                 G         +  N R   +  +    +   D      V+      L+    + 
Sbjct: 304 PAYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSN 360

Query: 322 AESMHDLNETDFFEEEEKKNK 342
                DL      +    + K
Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381


>gi|283832513|ref|ZP_06352254.1| protein AsmA [Citrobacter youngae ATCC 29220]
 gi|291072179|gb|EFE10288.1| protein AsmA [Citrobacter youngae ATCC 29220]
          Length = 617

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 42/335 (12%), Positives = 106/335 (31%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR    +Q  +  G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVKQVAVRSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +     PLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMVLTAEGASEPLIRADNMRLDVALWPLLSHQLSVKQVMLKGAVIQLTPETEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  + ++ V    +     E D+   + D++L++   
Sbjct: 121 RGKDAPVAPKDNTLPDLAEDRGWSFDIARLRVADSVLVF-QHEDDEQVTVRDIHLEMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ A+S    +    YP  +
Sbjct: 180 NQHRGT-----------------------FDFSGRMNRDQRDLALSFNGTVDASDYPHNL 216

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                             + + G        +    + +L   +      +  S+  L +
Sbjct: 217 SANIE----------QLSWQLQGADLP---PQGIKGQGQLQAQWLEEKKQLAFSQIHLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +    + +VS  ++          +   D
Sbjct: 264 ----NDSSLAGQARVSLLDKPEWVADLKFGQLNLD 294


>gi|84394343|ref|ZP_00993065.1| AsmA protein [Vibrio splendidus 12B01]
 gi|84375036|gb|EAP91961.1| AsmA protein [Vibrio splendidus 12B01]
          Length = 708

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 56/383 (14%), Positives = 114/383 (29%), Gaps = 59/383 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++LI +     VV+     + L ++   F+     QA    G ++ ++G I     P 
Sbjct: 1   MKKLLIFIAVPVFVVVAAILALVLLVNPNQFKPLIVEQAQKHTGLELVIEGDISWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   E        K++ + +     PL S ++ + ++ +D           
Sbjct: 61  IGFELGQTELRNPEGFTQPNLFKVDTVGVDVSVTPLFSNQLEIGNITLDGAEFYLETLKD 120

Query: 120 GVSNWFQ--------------------------RKSTMDMIHNVILEKIHVKGGRIKIID 153
           G  N                             + +T      + L  + V     ++ D
Sbjct: 121 GRKNIDALTQASAPQESEPVAGASSESTPAPQEQSATDASGWTINLAGVTVSNALFEMDD 180

Query: 154 QESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------- 202
           +++     L D++L +S      +       S ++ +    A G+  F            
Sbjct: 181 KQAGSFTKLYDVSLNLSEFAVDTWTTATFAASGENNQQKFSANGSAEFKLAEGFASYALR 240

Query: 203 ----------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
                           + KI  N    +K   L   +   A  + +DL G         I
Sbjct: 241 NIDLNAKFNDPATSIESAKIGLNTFEFDKVNQLTYAVIGNAAGLDLDLKGGGELTVDSAI 300

Query: 247 YSGVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
                +     S      L  S  K  +  +         +S + L+ +  N+    D K
Sbjct: 301 SKVTLNKLTLDSTFKGDTLPQSPMKVDMLSDLSFDLNKSHLS-FVLEKLQANA-IALDGK 358

Query: 305 TKVSQDEENLLNFSENGAESMHD 327
             V+  E   + FS +      D
Sbjct: 359 ADVTLSEIPKVRFSLHSPNIDLD 381


>gi|330943574|gb|EGH45911.1| AsmA [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 688

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 44/380 (11%), Positives = 100/380 (26%), Gaps = 43/380 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    VVL     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIFAWTGATLLVVLAILVIVIVTFDWNRIKPTLNAKVSEALHRPFAINGDLDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   E         ++ +  R   LPLL+ ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLSLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       + +  I    G +   DQ+ +    + 
Sbjct: 125 GPEARLERLADGRANWVFDLPKSDPNAEPSKWVMDIGAIKFDKGLVSFNDQKLNANLDVV 184

Query: 164 --------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAK 213
                     +  + ++               +     TG +  ++ +           K
Sbjct: 185 IDLLGKPIPFSEIVGSKEAKKAQDKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLALK 244

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
           +      +Q           + G L   +          ++G     L            
Sbjct: 245 DANQPFPVQADVKVGDTHALIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDSP 304

Query: 271 --RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENGA 322
                G         +  N R   +  +    +   D      V+      L+    +  
Sbjct: 305 AYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GFVASQPRPKLSGVLVSNQ 361

Query: 323 ESMHDLNETDFFEEEEKKNK 342
               DL      +    + K
Sbjct: 362 LLFSDLAPLIGADSNAAQKK 381


>gi|292491042|ref|YP_003526481.1| AsmA family protein [Nitrosococcus halophilus Nc4]
 gi|291579637|gb|ADE14094.1| AsmA family protein [Nitrosococcus halophilus Nc4]
          Length = 807

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/329 (14%), Positives = 105/329 (31%), Gaps = 22/329 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+ +      +  ++++ A  +P  ID  DF+     Q   + G+++ + G I + + P+
Sbjct: 5   LKFLFSTFLVVILLIVIAAAVLPFIIDPNDFKPQITSQVKKVTGRELTLGGDIDLSLFPW 64

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V  KD+ +           +K   + +R + LPL    + +  + +    LN   +++
Sbjct: 65  LGVALKDVSLSNPPSFEKASFAKAADMEVRVKLLPLFEKRVVMDTVVLRDLDLNLARNAQ 124

Query: 120 GVSNWFQRKSTMDM-----------------IHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           G +NW    +                     I  + +  + ++  RI   D+  D  Y +
Sbjct: 125 GKTNWEDLLAEKPQEAPPEAKPPEEEGTPPPIAGIAIAGLKIEAARIHWRDEVKDVRYTI 184

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
             LNL            + +            G+ D              + +   LK+ 
Sbjct: 185 EQLNLATDPLVPGEPIQMELAFDFDLSEPAVHGHLDFGGEVMADLETNHYRLQDTDLKLT 244

Query: 223 LFPLAYP---IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
               A P   + + L  N+     +   +          K          + L G+    
Sbjct: 245 AAGPALPIEQLALQLDANVDALLAKQQLTVSDLKLTSQVKGPQEAQLTLNTSLEGDLAAQ 304

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVS 308
               +  + + Q   P      + +   +
Sbjct: 305 RYRFQGLQLETQVKTPQFPEPLNARLATT 333


>gi|309780909|ref|ZP_07675648.1| AsmA family protein [Ralstonia sp. 5_7_47FAA]
 gi|308920212|gb|EFP65870.1| AsmA family protein [Ralstonia sp. 5_7_47FAA]
          Length = 761

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 58/409 (14%), Positives = 108/409 (26%), Gaps = 66/409 (16%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58
           ++ +GL     V++  A    L  DW   R     + +  +G+  A+ G + +       
Sbjct: 6   KLALGLVITPVVIVAAAVIFVLTFDWNRARPYLNDRVSQAIGRPFAINGDLVLTWKKPEG 65

Query: 59  -------LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P     DI +   +       + I  L+   E LPLL+  I +  + +D 
Sbjct: 66  ESGWRAYVPWPRFIANDITVGNPDWAKQPNVATIRQLTFVLEALPLLAHRIVIPSVTLDT 125

Query: 110 PHLNFYLSSKGVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQE-----SDQ 158
           P +      +  +NW          +       + L +I    G + + D       +  
Sbjct: 126 PAIALERDKQNRNNWTFDLTRGEGNNKKPSDWKLDLREIAFSRGSLALDDDIKRIHLTAT 185

Query: 159 VYFLSDLNLQISARFLNIISP-----------------------LSIDSIKGSVIAEGTG 195
           V  + +  L  +A    I S                                 +     G
Sbjct: 186 VDTIDNQTLYTAANGTAIKSADQPAKEPAASGAAASATAAQTPAAPDPQQPYGIAWTVKG 245

Query: 196 NFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253
            ++N        A    +  +      +Q         IDL G L              +
Sbjct: 246 TYNNAAITGSGKAGGVLRLQDAQRPYPLQADVTVGKTRIDLAGTLTNPASLTAIDLRLHL 305

Query: 254 AGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
           +G     L                  RL G  +      R  ++  +    +        
Sbjct: 306 SGASMAQLYPLTGVVLPDTPPFDTRGRLIGELRKRGSTWRYEKFTGRVGGSD----LGGT 361

Query: 305 TKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353
              +  E         G    H L   D        +     K+ D   
Sbjct: 362 LAYTMREPRP---QLTGELVSHQLLFADLAPIIGADSNASKAKRADPST 407


>gi|322418330|ref|YP_004197553.1| AsmA family protein [Geobacter sp. M18]
 gi|320124717|gb|ADW12277.1| AsmA family protein [Geobacter sp. M18]
          Length = 1059

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 58/370 (15%), Positives = 124/370 (33%), Gaps = 36/370 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK-GGIKIHILPFP 62
            +L     + ++ ++G+  +P  +D   ++ +   Q    + + +  + G   + +   P
Sbjct: 9   WLLPIAATILTLAVLGSSLLPRLLDLDTYKAEILAQVKSALKRDLQYQSGEFTMRL--TP 66

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +  F D+ I +K+  +  +  + L++R   LPLL  E+ +  + +++P L  +   +GV 
Sbjct: 67  AFSFTDVTIKEKDGATDFATADRLTVRIAILPLLRRELVLSRIQLERPSLKLWRDRQGVF 126

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL---NLQISARFLNIISP 179
           N      T+       +  + +K   I+  D    +   ++DL   +L +S         
Sbjct: 127 NISDL-LTISGGEAPGIHGVELKKAHIRFTDYAFSEKPVVTDLSETDLLLSRITRGKDCN 185

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI-SLKIQLFPLAYPIII-DLFGN 237
             +     S  A               T   PA    I S+ I       PI +   +  
Sbjct: 186 FRLSGQLASGRAR-------VPINLSGTVGIPAAGAPIWSMPIHGKVKTGPIDVGHFWPY 238

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297
                     SG   +                  L G+     G    + ++   +  + 
Sbjct: 239 YSRFVPFKSLSGQLELDAS---------------LKGHLNAFKGK---TEFRFTRLNLDY 280

Query: 298 STDEDNKTK-VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356
                 +    S      L  ++   +  H   + D F+   K  K  DL   D++ + +
Sbjct: 281 PQVFHARLTPKSFKGSCSLELTDRDLDIDHVKADLDGFKVNGKV-KLSDLHSGDLRITAH 339

Query: 357 KKEEKDNSHD 366
                 N  D
Sbjct: 340 ATTNSFNLRD 349


>gi|254291740|ref|ZP_04962526.1| asmA protein [Vibrio cholerae AM-19226]
 gi|150422333|gb|EDN14294.1| asmA protein [Vibrio cholerae AM-19226]
          Length = 703

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/432 (13%), Positives = 126/432 (29%), Gaps = 56/432 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ I L  L  +++     + L ++   F+     QA    G  + ++G I     P 
Sbjct: 1   MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +        K+E + +    +PLL  ++++ ++ +D    +      
Sbjct: 61  IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120

Query: 120 GVSNWFQRKS-----------------------TMDMIHNVILEKIHVKGGRIKIIDQES 156
           G SN                                   ++ L  + V    ++I D+++
Sbjct: 121 GRSNLDALTQAQSKPASAPATTDSAPASQPSLSEPTAAWSIELGGVSVSNAVLEITDKKA 180

Query: 157 DQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF--------------- 197
                L D+ L     +   +         D  +    A+G                   
Sbjct: 181 GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKRYALRNIN 240

Query: 198 --------DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    N+  + K+  +    +KA +L   +   A  + ++  G+      Q I   
Sbjct: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAISKV 300

Query: 250 VFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                      +   L  S  K  L            +S   L  +  N+    D K  V
Sbjct: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVL-LNKLTANA-LSFDGKADV 358

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
           +  +   + F+ +  E   D       +E +     +         + N   E +     
Sbjct: 359 TLADILKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSA 418

Query: 368 ENQENFSGDKMI 379
               + +G+  I
Sbjct: 419 LKALDVAGEISI 430


>gi|121997931|ref|YP_001002718.1| AsmA family protein [Halorhodospira halophila SL1]
 gi|121589336|gb|ABM61916.1| AsmA family protein [Halorhodospira halophila SL1]
          Length = 732

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/365 (13%), Positives = 110/365 (30%), Gaps = 38/365 (10%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +L+ +L  +  LF++++V A  V +  D  D+R+D         G+++ ++G I++   P
Sbjct: 4   ILKWLLFAVVGLFALLVVAATLVSVVFDPNDYRDDIAAAVEAETGRELTIEGDIRLSFFP 63

Query: 61  FPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
           +  +    + +  +E        ++E        LPLL G++    + I+ P     ++ 
Sbjct: 64  WLGLEVGRVTLADREGFHEDPFLEVEQADAAVRLLPLLWGQLETRLLSIEAPVARLMVNE 123

Query: 119 KGVSNW--------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
           +G  NW                            M+ +     + V+ G++   D+  D 
Sbjct: 124 EGEGNWEDLVARLVDDEAPPADPEEEAPAGELPPMLRDAAFGGLQVRRGQLLWEDRSIDD 183

Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIA---EGTGNFDNKRSAFKITANFPAKNK 215
              +   +L + A  L     L    +         +G               +      
Sbjct: 184 RKEVERFDLDVEALRLGQPVALQASWLGHGAELPRIDGQLRLQATLDQAMEQLDLDGLEM 243

Query: 216 AISLKIQLFPLAYP-IIIDLFGNLFWNEKQPIYSGVFSVAGDFS-----KLLNLELSAKK 269
            +  +    P     + +   G +       I      V G          L L+ +   
Sbjct: 244 LVDAQGDQVPGRQQRLGVTGNGRIGLGAPLRIEWPELEVTGAGIALEAAADLELDGTGAH 303

Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDED---NKTKVSQDEE----NLLNFSENGA 322
            +L       +    +SR  +    P   T          +  D +           +  
Sbjct: 304 GQLDWQLPAFNLRTALSRLDIGLPTPADPTAMTRVGGAGLIEFDGQRLLLPEFGLDLDDT 363

Query: 323 ESMHD 327
               D
Sbjct: 364 RIDLD 368


>gi|330899653|gb|EGH31072.1| AsmA [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 688

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/377 (11%), Positives = 101/377 (26%), Gaps = 37/377 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    VVL     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIFAWTGATLLVVLAILVIVIVTFDWNRIKPTLNAKVSEALHRPFAINGDLDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   E         ++ +  R   LPLL+ ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLSLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       + +  I    G +   DQ+ +    + 
Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVMDIGAIKFDKGLVSFNDQKLNANLDVV 184

Query: 164 --------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAK 213
                     +  + ++               +     TG +  ++ +           K
Sbjct: 185 IDLLGKPIPFSEIVGSKEAKKAQDKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLALK 244

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
           +      +Q           + G L   +          ++G     L            
Sbjct: 245 DANQPFPVQADVKVGDTHALIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDSP 304

Query: 271 --RLSGNFKISDGNVRISRYKLQS--ILPNSSTDEDNKTKVSQDEENLLN-FSENGAESM 325
                G       +   S ++ +       +S    +   V+      L+    +     
Sbjct: 305 AYSTDGRLIAKLHDPAGSNFRYEGFNGKIGNSDIHGDLGFVASQPRPKLSGVLVSNQLLF 364

Query: 326 HDLNETDFFEEEEKKNK 342
            DL      +    + K
Sbjct: 365 SDLAPLIGADSNAAQKK 381


>gi|330888040|gb|EGH20701.1| AsmA family protein [Pseudomonas syringae pv. mori str. 301020]
          Length = 347

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 42/334 (12%), Positives = 91/334 (27%), Gaps = 41/334 (12%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    VVL     V +  DW   +     +A+  + +  A+ G + +      
Sbjct: 5   RKIFAWTGATLLVVLAILVIVLVTFDWNRIKPTLNEKASEALHRPFAINGDLDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   E         ++ +  R   LPLL+ ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLTLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       V +  I    G +   DQ  +    + 
Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVVDIGAIKFDKGLVSFNDQTLNANLDVV 184

Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212
            ++L       + I                   +     TG +  ++ +           
Sbjct: 185 -IDLLGKPIPFSEIVGSKEAQKAQEKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLAL 243

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270
           K+ +    +Q           + G L   +          ++G     L           
Sbjct: 244 KDASQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303

Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPN 296
                 G         +  N R   +  +    +
Sbjct: 304 PAYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSD 337


>gi|330953112|gb|EGH53372.1| AsmA [Pseudomonas syringae Cit 7]
          Length = 688

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 44/380 (11%), Positives = 100/380 (26%), Gaps = 43/380 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    VVL     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIFAWTGATLLVVLAILVIVIVTFDWNRIKPTLNAKVSEALHRPFAINGDLDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   E         ++ +  R   LPLL+ ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLSLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       + +  I    G +   DQ+ +    + 
Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVMDIGAIKFDKGLVSFNDQKLNANLDVV 184

Query: 164 --------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAK 213
                     +  + ++               +     TG +  ++ +           K
Sbjct: 185 IDLLGKPIPFSEIVGSKEAKKAQDKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLALK 244

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
           +      +Q           + G L   +          ++G     L            
Sbjct: 245 DANQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDSP 304

Query: 271 --RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENGA 322
                G         +  N R   +  +    +   D      V+      L+    +  
Sbjct: 305 AYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GFVASQPRPKLSGVLVSNQ 361

Query: 323 ESMHDLNETDFFEEEEKKNK 342
               DL      +    + K
Sbjct: 362 LLFSDLAPLIGADSNAAQKK 381


>gi|238757200|ref|ZP_04618387.1| hypothetical protein yaldo0001_10990 [Yersinia aldovae ATCC 35236]
 gi|238704578|gb|EEP97108.1| hypothetical protein yaldo0001_10990 [Yersinia aldovae ATCC 35236]
          Length = 615

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 50/385 (12%), Positives = 109/385 (28%), Gaps = 55/385 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+L  L  L  V++ G   + L ++  DFR    +Q     G  + ++G ++ H+ P 
Sbjct: 1   MRRLLTTLVILLVVLVAGMSALVLLVNPNDFRAYMVKQVEKKSGYHLQLEGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+      +      S     E + +  +  PLLS ++ V  + +    +     S+  
Sbjct: 61  LSIIAGRTALTAPGANSPVISAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLTPDSEAQ 120

Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                                 + + K+ +    +     ++DQ   + D+NL++     
Sbjct: 121 QQPDAPVAPSGSAPINAHKAWKLDINKVQIADSLLIWQRSDNDQ-VNVRDINLELKQDAQ 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                             N   ++ A SL I      YP     
Sbjct: 180 R-----------------------QVHVTLASRVNRNQRDIAFSLVIDADMRHYPQQFSA 216

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                      I    + + G    +  +     +  L  +++     + +++    +  
Sbjct: 217 N----------ISQFTYKMEGAGIPVGGVS---GEGALQASYQSDVQQLLLNQLSFTA-- 261

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354
             +        K +  +      +        D      F  E K              +
Sbjct: 262 --NHNQLTGSAKATLGKVPDYIVNLATDNLNLD----TIFGWEPKNASASKETAKQPAIT 315

Query: 355 V---NKKEEKDNSHDKENQENFSGD 376
                   E D   D +   +F+  
Sbjct: 316 APVIATAAEDDVGQDLQVLRDFTAQ 340


>gi|212712124|ref|ZP_03320252.1| hypothetical protein PROVALCAL_03206 [Providencia alcalifaciens DSM
           30120]
 gi|212685171|gb|EEB44699.1| hypothetical protein PROVALCAL_03206 [Providencia alcalifaciens DSM
           30120]
          Length = 620

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 55/399 (13%), Positives = 118/399 (29%), Gaps = 62/399 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R L  L  L  VV+ G   + + ++  DFR    +Q     G ++  KG ++ H+ P 
Sbjct: 1   MKRFLTTLIILLVVVVAGLTALVMLVNPNDFRSYLVQQVEKKSGYQLDFKGDMRWHVWPT 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ----------PH 111
            S+    I +            + + +  +  PL+S  + V  + ID           P 
Sbjct: 61  LSIITGPISVTAPNASQPVLSADNMRLDVDLWPLISHRLSVEQIVIDGAVIRKTPESEPV 120

Query: 112 LNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
                      +     ++      + + KI +    +     +    Y L ++NL +  
Sbjct: 121 ATVNTPVAPGGSQVPADTSDKSKWLLDISKIDITNSLVIWQTPKD--EYNLRNINLSLK- 177

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
                      D  + ++   G  N + +   F I ++      +  +            
Sbjct: 178 ---------KSDDKQVALKFSGNLNKNQQEFNFDIKSDIDLSKLSQQVS----------- 217

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
                         I    + ++G       +        L      + G + +    +Q
Sbjct: 218 ------------GKITQFDYQLSGVDLPENGISGKIISDFLYTK--SNSGAISLDNIFIQ 263

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL-----------NETDFFEEEEKK 340
           +    + ++       +  +   +N + +      D            N      E    
Sbjct: 264 A----NESELTGTISANLTDIPDVNVNLSSPSLNLDRLIGQAPAAGKSNTASAASENTVI 319

Query: 341 NKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
           N      K  I  S  +K +    +    Q N S D +I
Sbjct: 320 NNERVGVKPVISGSNMQKYDLTGLNGFTAQFNVSMDTLI 358


>gi|257483280|ref|ZP_05637321.1| AsmA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|331012503|gb|EGH92559.1| AsmA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 688

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 46/381 (12%), Positives = 101/381 (26%), Gaps = 45/381 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    +VL     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIFAWTGATLLMVLTILVIVLVTFDWNRIKPTLNEKVSEALHRPFAINGDLDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   E         ++ +  R   LPLL+ ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLTLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       V +  I    G +   DQ  +    + 
Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVVDIGAIKFDKGLVSFNDQTLNANLDVV 184

Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212
            ++L       + I                   +     TG +  ++ +           
Sbjct: 185 -IDLLGKPIPFSEIVGSKEAQKAQEKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLAL 243

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270
           K+ +    +Q           + G L   +          ++G     L           
Sbjct: 244 KDASQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303

Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321
                 G         +  N R   +  +    +   D      V+      L+    + 
Sbjct: 304 PAYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSN 360

Query: 322 AESMHDLNETDFFEEEEKKNK 342
                DL      +    + K
Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381


>gi|330976735|gb|EGH76776.1| AsmA [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 676

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 44/380 (11%), Positives = 100/380 (26%), Gaps = 43/380 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    VVL     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIFAWTGATLLVVLAILVIVIVTFDWNRIKPTLNAKVSEALHRPFAINGDLDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   E         ++ +  R   LPLL+ ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLSLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       + +  I    G +   DQ+ +    + 
Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVMDIGAIKFDKGLVSFNDQKLNANLDVV 184

Query: 164 --------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAK 213
                     +  + ++               +     TG +  ++ +           K
Sbjct: 185 IDLLGKPIPFSEIVGSKEAKKAQDKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLALK 244

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
           +      +Q           + G L   +          ++G     L            
Sbjct: 245 DANQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDSP 304

Query: 271 --RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENGA 322
                G         +  N R   +  +    +   D      V+      L+    +  
Sbjct: 305 AYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GFVASQPRPKLSGVLVSNQ 361

Query: 323 ESMHDLNETDFFEEEEKKNK 342
               DL      +    + K
Sbjct: 362 LLFSDLAPLIGADSNAAQKK 381


>gi|241662404|ref|YP_002980764.1| AsmA family protein [Ralstonia pickettii 12D]
 gi|240864431|gb|ACS62092.1| AsmA family protein [Ralstonia pickettii 12D]
          Length = 765

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 50/358 (13%), Positives = 99/358 (27%), Gaps = 59/358 (16%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58
           ++ +GL     V++  A    L  DW   +     + +  +G+  A+ G + +       
Sbjct: 6   KLALGLVITPVVIVAAAVIFVLTFDWNRAKPYLNDRISQAIGRPFAINGDLILTWKKPQG 65

Query: 59  -------LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P +   DI +   E       + I  L+   E LPLL+  I +  + +D 
Sbjct: 66  ESGWRAYVPWPRLIANDITVGNPEWAKQPNVATIHQLTFVLEALPLLAHRIVIPSVTLDT 125

Query: 110 PHLNFYLSSKGVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIID---------- 153
           P +      +  +NW                  + L +I    G + + D          
Sbjct: 126 PAIALERDKQHRNNWTFNLAGSEGDDKKPSDWKLDLREIAFSKGSLALDDDIKRIHLTAT 185

Query: 154 -----------QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS-------VIAEGTG 195
                        +  V   +D   ++ A      S  +  +           +     G
Sbjct: 186 IDTVDNQALYTAANGTVVKSADQPAKVPAASGAAASDTAAQTPVAPDPQQPYGIAWTVKG 245

Query: 196 NFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253
            ++N        A    +  +      +Q         IDL G L              +
Sbjct: 246 TYNNATITGTGKAGGVLRLQDAQRPYPLQADVTVGKTRIDLAGTLTNPASLTALDLRLHL 305

Query: 254 AGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
           +G     L                  RL G  +      R  ++  +    +      
Sbjct: 306 SGASMAQLYPLTGVVLPDTPPFDTRGRLIGELRKQGSTWRYEKFTGRVGGSDLGGTLT 363


>gi|289675600|ref|ZP_06496490.1| AsmA [Pseudomonas syringae pv. syringae FF5]
          Length = 441

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 44/380 (11%), Positives = 100/380 (26%), Gaps = 43/380 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    VVL     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIFAWTGATLLVVLAILVIVIVTFDWNRIKPTLNAKVSEALHRPFAINGDLDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   E         ++ +  R   LPLL+ ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLSLGNPEWSKTPQMVTLKHVEFRLSLLPLLAQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       + +  I    G +   DQ+ +    + 
Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVMDIGAIKFDKGLVSFNDQKLNANLDVV 184

Query: 164 --------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAK 213
                     +  + ++               +     TG +  ++ +           K
Sbjct: 185 IDLLGKPIPFSEIVGSKEAKKAQDKGAVPQDYAFGLAVTGQYHGQKLSGTGKVGGLLALK 244

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
           +      +Q           + G L   +          ++G     L            
Sbjct: 245 DANQPFPVQADVKVGDTHALIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDSP 304

Query: 271 --RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENGA 322
                G         +  N R   +  +    +   D      V+      L+    +  
Sbjct: 305 AYSTDGRLIAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GFVASQPRPKLSGVLVSNQ 361

Query: 323 ESMHDLNETDFFEEEEKKNK 342
               DL      +    + K
Sbjct: 362 LLFSDLAPLIGADSNAAQKK 381


>gi|86147928|ref|ZP_01066232.1| AsmA protein [Vibrio sp. MED222]
 gi|85834253|gb|EAQ52407.1| AsmA protein [Vibrio sp. MED222]
          Length = 727

 Score =  140 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 59/401 (14%), Positives = 116/401 (28%), Gaps = 59/401 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++LI +     VV+     + L ++   F+     QA    G ++ ++G I     P 
Sbjct: 1   MKKLLIFIAVPVFVVVAAILALVLLVNPNQFKPLIVEQAQKHTGLELVIEGDISWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   E        K++ + +     PL S ++ + ++ +D           
Sbjct: 61  IGFELGQTELRNPEGFTQPNLFKVDTVGVDVSVTPLFSNQLEIGNITLDGAEFYLETLKD 120

Query: 120 GVSNWFQ--------------------------RKSTMDMIHNVILEKIHVKGGRIKIID 153
           G  N                             + ST      + L  + V     ++ D
Sbjct: 121 GRKNIDALTQVSAPKESEPAADTSSEATPAPQEQTSTDTSGWTINLAGVTVSNALFEMDD 180

Query: 154 QESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------- 202
           +++     L D++L +S      +       S ++ +    A G+  F            
Sbjct: 181 KQAGSFTKLYDVSLSLSEFAVDTWTTATFAASGENNQQKFSANGSAEFKLAEGFASYALR 240

Query: 203 ----------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
                           + KI  N    +K   L   +   A  + +DL G         I
Sbjct: 241 NIDLNAKFNDPATSIESAKIGLNTFEFDKVNQLTYAVIGNAAGLDLDLKGGGDLTVDSAI 300

Query: 247 YSGVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
                +     S      L  S  K  +  +         +S + L  +  N+    D K
Sbjct: 301 SKVTLNKLTLDSTFKGETLPQSPMKVDMLSDLSFDLTKSHLS-FVLAKLQANA-IALDGK 358

Query: 305 TKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
             ++  E   + FS +      D        EE       D
Sbjct: 359 ADITLSEIPKVRFSLHSPNIDLDEFLGLGNTEETASAAPSD 399


>gi|218709006|ref|YP_002416627.1| AsmA protein [Vibrio splendidus LGP32]
 gi|218322025|emb|CAV18063.1| AsmA protein [Vibrio splendidus LGP32]
          Length = 727

 Score =  140 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 59/401 (14%), Positives = 116/401 (28%), Gaps = 59/401 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++LI +     VV+     + L ++   F+     QA    G ++ ++G I     P 
Sbjct: 1   MKKLLIFIAVPVFVVVAAILALVLLVNPNQFKPLIVEQAQKHTGLELVIEGDISWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   E        K++ + +     PL S ++ + ++ +D           
Sbjct: 61  IGFELGQTELRNPEGFTQPNLFKVDTVGVDVSVTPLFSNQLEIGNITLDGAEFYLETLKD 120

Query: 120 GVSNWFQ--------------------------RKSTMDMIHNVILEKIHVKGGRIKIID 153
           G  N                             + ST      + L  + V     ++ D
Sbjct: 121 GRKNIDALTQVSAPKESEPAADTSSEATPAPQEQTSTDTSGWTINLAGVTVSNALFEMDD 180

Query: 154 QESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------- 202
           +++     L D++L +S      +       S ++ +    A G+  F            
Sbjct: 181 KQAGSFTKLYDVSLSLSEFAVDTWTTATFAASGENNQQKFSANGSAEFKLAEGFASYALR 240

Query: 203 ----------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
                           + KI  N    +K   L   +   A  + +DL G         I
Sbjct: 241 NIDLNAKFNDPATSIESAKIGLNTFEFDKVNQLTYAVIGNAAGLDLDLKGGGDLTVDSAI 300

Query: 247 YSGVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
                +     S      L  S  K  +  +         +S + L  +  N+    D K
Sbjct: 301 SKVTLNKLTLDSTFKGETLPQSPMKVDMLSDLSFDLTKSHLS-FVLAKLQANA-IALDGK 358

Query: 305 TKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
             ++  E   + FS +      D        EE       D
Sbjct: 359 ADITLSEIPKVRFSLHSPNIDLDEFLGLGNTEETASAAPSD 399


>gi|217976783|ref|YP_002360930.1| AsmA family protein [Methylocella silvestris BL2]
 gi|217502159|gb|ACK49568.1| AsmA family protein [Methylocella silvestris BL2]
          Length = 1186

 Score =  140 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 56/328 (17%), Positives = 106/328 (32%), Gaps = 26/328 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR  L        +VL  A   P  +DW+  R   + + +  +G++  + G I + +LP 
Sbjct: 40  LRDSLTVFAIGVILVLTAALVGPYLVDWSAERGLIQSRLSAAIGRQTEIAGPIDLKLLPT 99

Query: 62  PSVFFKDIRIDQKEDGSFE-SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           P     DI +   E  +   +    + +   F PLL GE+   +  I+ P L   L   G
Sbjct: 100 PYFVVGDISVKGPEGPASWRASASKMRLEIAFAPLLRGEVEFVEAAIENPRLEVSLGPDG 159

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                       +  NV  ++I   GG + I D   ++ + L  L+L             
Sbjct: 160 A--PALTLKDSPLARNVRFQRIKATGGSLLIDDPTRNRRFELGGLDL-----------EA 206

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
              S+ G     G+    + R +F+      A+   + LK+     +    +   G L  
Sbjct: 207 EAGSLYGPFKGHGSAPLPDGRFSFQF-LTGAAEAGEMKLKLSAEAPSRGA-LSFEGGLTL 264

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300
             +    +G   +      L  L              ++         +       +S  
Sbjct: 265 TPEAQKLAGALRLQSADPALRTLS----------QLTLTPQRAAFDEIEATLGEEPNSAT 314

Query: 301 EDNKTKVSQDEENLLNFSENGAESMHDL 328
                ++        + + +      DL
Sbjct: 315 AKGVGELDFSGAPKASLTLSSDRVDVDL 342


>gi|90413233|ref|ZP_01221228.1| Hypothetical AsmA protein [Photobacterium profundum 3TCK]
 gi|90325785|gb|EAS42243.1| Hypothetical AsmA protein [Photobacterium profundum 3TCK]
          Length = 713

 Score =  140 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 56/422 (13%), Positives = 113/422 (26%), Gaps = 61/422 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L  L  +  V++VG   +   +D   F+     Q     G+ + + G I     P 
Sbjct: 1   MKKLLYVLLAIVLVIVVGIGALLALVDPNQFKPLLSEQVKKATGRDLVINGDISWRFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                 +      +    +   K+    +    +PL S  + +  + ++   +       
Sbjct: 61  IGFSLGETEFKNPQGFAEADLVKLGSAELSVSVMPLFSQHLEIGSISLNDARVFIQTRKD 120

Query: 120 GVSNWF------------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQE 155
           GVSN                            +S       + L  + V     ++ D +
Sbjct: 121 GVSNLDGLGEQAAVEGTVTENTNSEPVTQLPVESEATQPWTISLAGVEVMNASAELRDDK 180

Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD-----------NKRSAF 204
           +     +  LN ++        +  + D    +     T   D            +  A 
Sbjct: 181 AGTATTIDSLNFKLDTFSPGEWTQANFDITGKNAELSFTAKGDSQLLIATDYKGGELKAL 240

Query: 205 KITAN-FPAKNKAISLKIQLFPLAYP--IIIDLFGNLFWNEKQPIYSGVFSVA------- 254
            +TA+   + N   SL + +  L       I         E     SG            
Sbjct: 241 NLTASAKDSINNIESLTLGVDHLKVGDWANITFTAKGQIPELAFDASGATRFKISTDYNM 300

Query: 255 --------GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
                       K   L     K  L+ +          +  + +          D K  
Sbjct: 301 AELDKLTLSSDLKGSTLPRPEMKVGLNADATYDVAKGLATLSRFE--TSIDELLLDGKGS 358

Query: 307 VSQDEENLLNFSENGAESMHDLN----ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKD 362
                  ++ F  N      D       +   ++  K+             +V+K EE D
Sbjct: 359 FKSATIPVIRFDVNSDNIDLDAFLGTASSASNKDTTKEETGSVPSAGGETSTVSKSEEPD 418

Query: 363 NS 364
            S
Sbjct: 419 LS 420


>gi|259908043|ref|YP_002648399.1| putative assembly protein [Erwinia pyrifoliae Ep1/96]
 gi|224963665|emb|CAX55162.1| Wzc (similar to AsmA) suppressor of OmpF assembly mutants [Erwinia
           pyrifoliae Ep1/96]
 gi|283477940|emb|CAY73856.1| Protein asmA precursor [Erwinia pyrifoliae DSM 12163]
          Length = 615

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 43/330 (13%), Positives = 97/330 (29%), Gaps = 52/330 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R +  L  L  VV+ G   + + ++  DFR    RQ     G  +A+ G ++ H+ P 
Sbjct: 1   MKRFITTLAILLVVVVAGMTALVMLVNPNDFRAYMVRQVEQRSGYHLALNGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +              + +    LPL S ++ V  + +    +     SK +
Sbjct: 61  LSILSGPVTLTAPGARQPVVSAANMRLDVNLLPLFSHQLSVKQVMLKGAVIRLTPDSKSL 120

Query: 122 S-----------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
                       + F     +       +  + +  G +    Q + +   + DLNL + 
Sbjct: 121 PPVNAPIGPAGSSTFSPTDDVARGWKFDISHLRIADGLLVW-QQSNGEQLNVRDLNLALD 179

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                                                 N   +   + L  +L    YP 
Sbjct: 180 QNQPR-----------------------QVHIEISSRINRDQRELQLDLSSELDITDYPQ 216

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
            +             +    + + G    L  ++  A   ++  N++   G   +    L
Sbjct: 217 RVK----------AIVQQSDYQLKGVDLPLAGIQGKA---QMKANWESLTGRFSLEDIHL 263

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSEN 320
            +    + +        +      L  + +
Sbjct: 264 NA----NDSQLSGTLSGTLGAHPELLANLH 289


>gi|157144986|ref|YP_001452305.1| putative assembly protein [Citrobacter koseri ATCC BAA-895]
 gi|157082191|gb|ABV11869.1| hypothetical protein CKO_00717 [Citrobacter koseri ATCC BAA-895]
          Length = 617

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 41/335 (12%), Positives = 101/335 (30%), Gaps = 50/335 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + + ++  DFR    +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGFSALVMLVNPNDFRAYMVQQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY------ 115
            S+    + +  +       + + + +     PLLS +++V  + +    +         
Sbjct: 61  LSILSGRMALTAEGASEPLVRADNMRLDVALWPLLSHQLKVEQVMLKGAVIQLTPQTEAA 120

Query: 116 LSSK---GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +        D   +  +  + V    +     E D+   + D+ LQ+   
Sbjct: 121 RREDAPVAPKDNTLPDVPEDRGWSFDISSLRVADSVLVF-QHEDDEQITVRDIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  +                         F    N   ++ ++S    +    YP   
Sbjct: 180 EQHRGT-----------------------FDFSGRVNRDQRDLSLSFNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   N    I    + + G       ++   +        +     +  S+  L +
Sbjct: 214 -------HNLTAGIEQLNWQLQGADLPKQGIQGQGQLQAQWQEGQ---KRLSFSQLSLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +    + +V+  +E          +   D
Sbjct: 264 ----NDSTLTGQAQVTLSDEPEWAIDLQFGKLNLD 294


>gi|144897494|emb|CAM74358.1| AsmA protein [Magnetospirillum gryphiswaldense MSR-1]
          Length = 673

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 52/393 (13%), Positives = 118/393 (30%), Gaps = 53/393 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++VL  +G +  + +     +P+ +     +E+   Q     G+ + ++G + +   P 
Sbjct: 1   MKKVLAIIGVIVVLAIGALVALPMLVPADRIKEEVVAQVKAATGRDLTIQGKVSVSAFPS 60

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V   +I +      S     ++  L ++ + LP+LSG + V    +  P +   +  K
Sbjct: 61  LGVEVANIALANPAGFSTKDLVRLGALDVKLKLLPILSGRVEVDSFVLVDPVITLEVDRK 120

Query: 120 GVSNWFQ--------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159
           G +NW                             + +++L  + +  G++  ID  +   
Sbjct: 121 GKANWVFDTPAAAPAAADKTKPSEKSAGGGASAGLGDLVLGDVRISNGKLTYIDGPAGTK 180

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF-----KITANFPAKN 214
             +  +NL            +S+ S+   +  +G  N+  K         K  A    K+
Sbjct: 181 EEVDGINL-----------TVSLKSLDDPLAVKGALNWRAKAIELGLNVAKPRALIDGKS 229

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFW-NEKQPIYSG----VFSVAGDFSKLLNLELSAKK 269
            A  + I   P+      +  G      +     S       +       L         
Sbjct: 230 SAADITISSEPVKLAFKGEANGGATAGAKGNIDLSVPSIRTLAQWATGKPLAMEGSGLGP 289

Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
             L+G    +   + +++ K+       +   +    V               +   D+ 
Sbjct: 290 FSLTGQLAAAGSKLSLTQAKI----AIDAIKANGDFNVDTGGARP------ALKGKLDVE 339

Query: 330 ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKD 362
             D                         K + D
Sbjct: 340 ALDLNPYLPADKPASGATTSAPAAGGGSKGKSD 372


>gi|268590243|ref|ZP_06124464.1| protein AsmA [Providencia rettgeri DSM 1131]
 gi|291314527|gb|EFE54980.1| protein AsmA [Providencia rettgeri DSM 1131]
          Length = 612

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 51/387 (13%), Positives = 124/387 (32%), Gaps = 58/387 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R L  L  L  V++ G  T+ + ++  DFR     Q     G ++   G ++ H+ P 
Sbjct: 1   MKRFLTTLIILLVVIVAGLTTLVMLVNPNDFRHYIVEQVEKKSGYQLEFNGDMRWHVWPT 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +            + + +  E  PL+S ++ V  + ID   +     S+  
Sbjct: 61  LSIITGPVSLTAPNAAKPILSADNMRLDVELWPLISHKLSVEQIVIDGAVIRKTPDSEIQ 120

Query: 122 SNWFQR----------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
           ++                       + +EKI++    +    Q S   + L +++L +  
Sbjct: 121 THRNAPVAPGGVPTSSPLPEKNSWLLDIEKINISNSLVIW--QTSKDEFNLRNIDLSLK- 177

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
                      D  + +V   G  N + +   F + A+    +    +  +L        
Sbjct: 178 ---------KSDKKQVAVKFSGNLNKNQQEFVFNLRADIDLSDINQKISGKL-------- 220

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
                              + ++G       +E      +++ +F  + G V  +     
Sbjct: 221 ---------------TQFDYKLSGVDLPESGIEG-----QIASDFLYTKGKVESASLS-H 259

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKD 349
            ++  + +       +   +   +  +    +   D  L         E +  N+ +   
Sbjct: 260 LVITANESALSGDASIQLADTPKIMVNLVAEKLDLDNLLGTVPSSTHIESEVNNNRVGVK 319

Query: 350 DIQYSVNKKEEKDNSHDKENQENFSGD 376
            +    N +      +D    + FS +
Sbjct: 320 PVISGANPQ-----QYDLSGLQAFSAN 341


>gi|148549937|ref|YP_001270039.1| AsmA family protein [Pseudomonas putida F1]
 gi|148513995|gb|ABQ80855.1| AsmA family protein [Pseudomonas putida F1]
          Length = 688

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 45/356 (12%), Positives = 102/356 (28%), Gaps = 32/356 (8%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           R+L+        VL     V    DW   +     + +  + +  A+ G + +H      
Sbjct: 6   RILVWTLASLLTVLAILVVVIATFDWNRVKPLLNEKVSEALHRPFAINGNLAVHWRTEPE 65

Query: 58  ------ILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P    +D+ +   E         +E +  R   LPL+  +I +  + + +
Sbjct: 66  EGGWRAWVPWPHFIAEDLTLGNPEWLKEPKMVGLERVEFRLAPLPLVFQQISIPRINLTK 125

Query: 110 PHLNFYLSSKGVSNW-----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
           P  +    + G +NW      + ++       + +  I    G +   DQ       +  
Sbjct: 126 PTASLTRLADGRANWVFDFGPKDENAEPSKWQLDIGAIGFDQGNVSFDDQTLKTSMKVQI 185

Query: 165 LNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITAN--FPAKNKAIS 218
             L     F  I+   S +   G    +   +  G +  +  +           ++ +  
Sbjct: 186 DPLGKPIPFSEIVGKASAEKAGGAQDYAFALKAQGRYKGQPVSGTGKIGGLLALQDASQP 245

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLS 273
             +Q         + L G L              ++G     L                 
Sbjct: 246 FPLQADVRIADTHVVLAGTLTDPRNLGALDLRLRLSGASLGNLYPLTGVTLPDTPAYSTD 305

Query: 274 GNFKISDGNVRISRYKLQS--ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
           G    +    + + +  Q        S    +   V+      L+ +    + +  
Sbjct: 306 GRLSANLQAAQGASFNYQGFNGKIGDSDIHGDLAFVASQPRPRLSGNLVSNQLLFK 361


>gi|308187487|ref|YP_003931618.1| Protein asmA precursor [Pantoea vagans C9-1]
 gi|308057997|gb|ADO10169.1| Protein asmA precursor [Pantoea vagans C9-1]
          Length = 607

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 50/386 (12%), Positives = 113/386 (29%), Gaps = 49/386 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++RV+  L  L  VV+ G   + L ++  DFR    +Q     G ++ V   ++ H+ P 
Sbjct: 1   MKRVITTLAILLVVVVTGMSALVLLVNPNDFRAYMVQQVEQRSGYRLEVSSDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +            E + +  +  PLLS ++ V  + +    +     S   
Sbjct: 61  LSILAGRMSLTAPGASQPLVSAENMRLDVDLWPLLSHQLSVSQVLLKNAIVRVTPESSAQ 120

Query: 122 S-------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                         +      +  + K+ V    +       D+ Y   DLN+ +     
Sbjct: 121 RAKNAPQGPRDAEPAPASSGWSFDIAKLRVADSLLIWQQPGGDE-YNFRDLNINMDQDAN 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
            + +                        +   +     +N  ++LK QL    YP  +  
Sbjct: 180 KLAT-----------------------LSLSTSLMRNQRNATLNLKGQLDASQYPHRLS- 215

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                      +    ++++G    +  ++ S     L G +         S  +L +  
Sbjct: 216 ---------GQLQQLDYTLSGADVPVQGIKGSL---SLQGEWDGDRQQFSFSNLQLTA-- 261

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-LNETDFFEEEEKKNKNDDLKKDDIQY 353
             + +    + +        L      +    D L  +    E          +   I  
Sbjct: 262 --NDSTLTGQGRGQVTPPQQLALDLKASTLNLDNLLTSTPVSETPGVQHATVARSPVIAA 319

Query: 354 SVNKKEEKDNSHDKENQENFSGDKMI 379
              +       ++         D ++
Sbjct: 320 PRERSNADSPLNELNLALKLQADSVV 345


>gi|288933110|ref|YP_003437169.1| AsmA family protein [Klebsiella variicola At-22]
 gi|288887839|gb|ADC56157.1| AsmA family protein [Klebsiella variicola At-22]
          Length = 683

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 51/406 (12%), Positives = 113/406 (27%), Gaps = 45/406 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56
           R+ L+ +     +++V  F V    DW   +    ++ +  + +  A++G + +      
Sbjct: 5   RKTLVIITGTILLLIVLFFIVLATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQP 64

Query: 57  ------HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P+P V  +DI +             +  +      L LLS  + +  + ++
Sbjct: 65  DERGWRSWIPWPHVHAEDIVLGNPPAIPQVTMIHLPRVEATLAPLALLSKTVYLPWIKLE 124

Query: 109 QPHLNFYLSSKGVSNWFQR--------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           QP +     ++  +NW  +          +     +  L+ I    G I I D+ +    
Sbjct: 125 QPDVRLIRLAEDNNNWTFQLAGDQRTSGDSAPSSWSFRLDNILFDRGTIAIDDKITRSDI 184

Query: 161 FL------SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214
            +        L         +  S   +      +  +G           KI      ++
Sbjct: 185 TILVDPLGKPLPFSEVTGTKDQHSAAKVGDYVFGLSLKGRYKDQPVTGNGKIGGMLALRS 244

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270
            +    +Q    +    +   G +               AGD  + L             
Sbjct: 245 ASTPFPLQGDFHSGNTRVAFSGTVSDPLNVGGIDLRLKFAGDSLRDLYDLTGVLLPETPS 304

Query: 271 -----RLSGNFKISDG-NVRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAE 323
                RL  +FK  +        +  +    +           +       L+      +
Sbjct: 305 FSTDGRLRADFKQKNRMRFDYQDFNGRIGDSD----IHGSLTYTTGKPRPKLSGDMESKQ 360

Query: 324 SMH-DLNETDFFEEEEKKNKNDDLKKDD-IQYSVNKKEEKDNSHDK 367
               DL      +  +   K    +  D  Q +           DK
Sbjct: 361 LRLADLGPLIGVDSGKGTKKGAARQAGDRPQPAGKVLPADRFETDK 406


>gi|288549838|ref|ZP_05968369.2| protein AsmA [Enterobacter cancerogenus ATCC 35316]
 gi|288317605|gb|EFC56543.1| protein AsmA [Enterobacter cancerogenus ATCC 35316]
          Length = 616

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 49/391 (12%), Positives = 108/391 (27%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RRVL  L  L  V++ G   + L ++  DFR    RQ     G ++ + G ++ H+ P 
Sbjct: 1   MRRVLTTLMILLVVLVAGLSALVLLVNPNDFRAYMVRQVEARSGYELKLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +            + + +    +PL S +++V  + +    +     S+ V
Sbjct: 61  LSILSGRMSLTAPGASQPLVAADNMRLDVALIPLFSHQLQVDRVMLKGAVIQLTPQSEAV 120

Query: 122 SNWFQ---------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                              D   +  +  + +    +     E D+   + +++L +   
Sbjct: 121 RQPDAPVAPHENTLPDVPSDAGWSFDIANLKIADSVLVF-QHEDDEQVTVRNISLTMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +I +                        AF    N   ++  +S+   +    YP  +
Sbjct: 180 ANHIAT-----------------------MAFSGRINRDQRDLTLSMDANVNASDYPHQL 216

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                             + + G       +          G  +               
Sbjct: 217 TADIR----------QLNWQLTGADLPTKGITG-------QGTLQAIWQEEHKQLQLNNL 259

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
            L  + +    +  V+  EE              +           +    +N      K
Sbjct: 260 NLQANDSSMKGQASVTLAEEPKWVLDLQFDTLNLENLLPTQPASTADAGAAQNGQSQAMK 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S N         D      F+ D ++
Sbjct: 320 PRPVISSNLD-----QPDYNGLRGFTADILL 345


>gi|315127947|ref|YP_004069950.1| AsmA protein [Pseudoalteromonas sp. SM9913]
 gi|315016461|gb|ADT69799.1| AsmA protein [Pseudoalteromonas sp. SM9913]
          Length = 645

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 56/372 (15%), Positives = 128/372 (34%), Gaps = 36/372 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +   +G +  + +      P  I           Q     G+ + +KG   + + P 
Sbjct: 1   MKTLFKVIGVILLLCIALIVAAPFLIPTDTIFNKVSEQVEKTTGRTLTIKGDKTLSVFPA 60

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +   D+       GS    + ++ L++   +L LL GE+++    I++P +       
Sbjct: 61  LKLELNDVHFANMPSGSRADMASMQQLAVHIPWLSLLGGELKLEKFVINEPDILLETDKS 120

Query: 120 GVSNWFQRKSTMDMIHN---------------VILEKIHVKGGRIKIIDQESDQVYFLSD 164
           G +NW    +                      + L ++ + GG    +D ++     +SD
Sbjct: 121 GKANWQLFDAVAKQPEQQTQAGEAVKLPENFDIQLGEVAIYGGSFTYLDGQTGAKQQISD 180

Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
           L L I            + S++  +   G   +  +R    +  N PAK    +    + 
Sbjct: 181 LELAI-----------LLPSLRKQLEVTGAITYMQERFELDVKLNTPAKAIEGA-TFNVK 228

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI----SD 280
                 ++DL  +    ++     G+ ++ GD  K +        +  +  F      ++
Sbjct: 229 QTLNSRLVDLMFDGSIAKQGQDIKGLLTLNGDSVKNIANWQGVDLNAKNNAFNAFSINAE 288

Query: 281 GNVRISRYKLQSILPN-SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339
            ++    + L  ++    + +   K+K++      L  + +    M DLN        +K
Sbjct: 289 MHLLGEEFNLTELVATLDALEIKGKSKLNLGS--RLAVNADIDLGMLDLNPYLPETVAKK 346

Query: 340 KNKNDDLKKDDI 351
           +    D  K   
Sbjct: 347 EVPAKDDSKPAE 358


>gi|83312506|ref|YP_422770.1| hypothetical protein amb3407 [Magnetospirillum magneticum AMB-1]
 gi|82947347|dbj|BAE52211.1| Uncharacterized protein involved in outer membrane biogenesis
           [Magnetospirillum magneticum AMB-1]
          Length = 686

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 50/363 (13%), Positives = 123/363 (33%), Gaps = 51/363 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++VLI +G +  +++     +P  I     + +         G+ ++++G + +   P 
Sbjct: 19  MKKVLIAVGVVVILIIGALVALPALIPAERIQSEIVAGVKSATGRDLSIQGKLSVSAFPS 78

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            SV   ++ +      +     ++  + +R + +PLL G++ V    +  P +      +
Sbjct: 79  LSVQVGNVALANPPGFTTKDLIRLGAVDVRLKLMPLLGGKVEVDSFVLVDPVIVLETDRQ 138

Query: 120 GVSNWFQRKST----------------------MDMIHNVILEKIHVKGGRIKIIDQESD 157
           G  NW     T                         ++++ L  + +  G++  ID ++ 
Sbjct: 139 GKGNWVFDSPTAPAPAAAKPADKPADKAASAASTGGLNDIRLGDVRITNGKLIQIDGKTG 198

Query: 158 QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217
               +SD+NL            +++ S+   + A+G+  ++ K+    +           
Sbjct: 199 AKQEVSDINL-----------QVALKSLTDPLSAKGSLVWNAKKIELALGVTSLKALMDG 247

Query: 218 SLK-IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE---------LSA 267
               +++   + P+ + L GN       P   G   +     + L               
Sbjct: 248 QSSALEVSVASEPVKLGLKGNAK-GGAAPGVDGTLELTVPSIRNLAAWAGSPITMAGNGL 306

Query: 268 KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               ++G      G V  ++  +      +  D    T      +  +    +    M D
Sbjct: 307 GPLSINGKLAAGPGQVAFTQAAIAIDAIKAKGDVTVNTS---GAKPAIKGRLDVD--MLD 361

Query: 328 LNE 330
           LN 
Sbjct: 362 LNP 364


>gi|260599817|ref|YP_003212388.1| hypothetical protein CTU_40250 [Cronobacter turicensis z3032]
 gi|260218994|emb|CBA34349.1| Uncharacterized protein yhjG [Cronobacter turicensis z3032]
          Length = 685

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 50/388 (12%), Positives = 111/388 (28%), Gaps = 45/388 (11%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           +++  +  +F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KIISVVAGVFLLLVVVAIIIIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERNKE 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +D+ +    D        +  +      L LL+  + +  +   +
Sbjct: 66  EPGWRSWVPWPHVHAEDVVLGNPPDIPQVTMIHLPRVEATLAPLALLTKTVYLPWIKFQK 125

Query: 110 PHLNFYLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           P       S+  +NW          ++      +  L+ I    GR+++ D  S     +
Sbjct: 126 PDAQLIRLSEKTNNWTFDMKQSEGEEAQPPSSWSFRLDNILFDQGRLRVDDNVSRADVEI 185

Query: 163 SDLNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITAN--FPAKNKA 216
               L     F  +                   +  G ++N+              K+K 
Sbjct: 186 LIDPLGKPLPFNEVTGEKGKKGNDKVGDYVFGLKARGTYNNQPLRGDGKIGGMLALKSKG 245

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS------ 270
               +Q    +    +   G +               AG+    L               
Sbjct: 246 TPFPVQADLRSGDTRVAFAGTVNDPMNMGGVDLQLKFAGNSLGDLYELTGVLLPDTPPFE 305

Query: 271 ---RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESM 325
              RL        G+V     +  +    +           SQ      L       +  
Sbjct: 306 TDGRLVAKINSDKGSVYDYRGFNGRIGESD----IHGSLTYSQGKPRPKLEGDLESRQLR 361

Query: 326 H-DLNETDFFEEEEK--KNKNDDLKKDD 350
             DL      +      K+KN + KK +
Sbjct: 362 LADLGPLIGVDSGAGAEKSKNSEQKKGE 389


>gi|227356727|ref|ZP_03841113.1| outer membrane assembly protein [Proteus mirabilis ATCC 29906]
 gi|227163235|gb|EEI48166.1| outer membrane assembly protein [Proteus mirabilis ATCC 29906]
          Length = 643

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 45/356 (12%), Positives = 103/356 (28%), Gaps = 51/356 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R L  L  L  V+L G  T+ L I+  DFR     +     G K+ ++  ++ H+ P 
Sbjct: 1   MKRFLTTLAILLVVILAGLTTLVLLINPNDFRGYLVERVEKQSGYKLTLQDDMRWHVWPK 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +            + + +  E  PLLS ++ V ++ +    +     SK +
Sbjct: 61  LSIISGKMSLTAPGAEQPLITADNMRLDVELWPLLSHQLEVKEVMLKGAVVRQTPESKAI 120

Query: 122 SNWFQRKSTMDMI-----------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
                     +               + + K+ +    I     +  +   L D+NL + 
Sbjct: 121 PKITPPSVANEDSTRPIIEPKTNRWQLNIAKVRISDSLIIW-QTKGGEQLNLRDINLLLK 179

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                                                 N   +   +++        YP 
Sbjct: 180 TDDK-----------------------KQINLEMSTKINRDRRELMLNVVANADMSGYPY 216

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
            I             I    ++++G       +        L+ +F I + +V +     
Sbjct: 217 QISGN----------IAQLDYALSGIGLPAQGISG-----NLTSDFNIKNDSVNVIALN- 260

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346
              +  + +           ++N       G     +    +  +    +  +  L
Sbjct: 261 NLNMTANESQLQGSITAELAKKNRYQVELTGDTLNLNTLLPELAQPNSSETASLTL 316


>gi|167648599|ref|YP_001686262.1| AsmA family protein [Caulobacter sp. K31]
 gi|167351029|gb|ABZ73764.1| AsmA family protein [Caulobacter sp. K31]
          Length = 649

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 49/328 (14%), Positives = 107/328 (32%), Gaps = 36/328 (10%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKED------- 76
           +  DW  FR    R A+  + +++ + G +++H   F P V    +RI Q +        
Sbjct: 1   MVFDWNWFRGPVGRMASARLNRQVVITGDLRVHPWSFSPKVEAYGVRIAQPDWAAKADPK 60

Query: 77  ----GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--QRKST 130
               GS  +K++ ++++   LPLL GE+ +  + ID+P +     + G +NW      + 
Sbjct: 61  GSAAGSQMAKVDRIAVQIRILPLLKGEVILPLLAIDRPDVRLLRDASGRANWTFGDPNAP 120

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
              +    ++   +  G+++  DQ+ D           + +   N  +       +G  +
Sbjct: 121 KTPLKLPAIQHFIINDGQLRYEDQQRDV--------FFLGSVSSNEHATTDG---RGKFV 169

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAI-SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
            EG G  +       +T                    A    +   G++        +  
Sbjct: 170 LEGKGQLNRAPFTALVTGGPLLNISPNRPYPFDAQIDAGSTHVTAKGDITKPFDLGRFET 229

Query: 250 VFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
             SV+G     L              ++SG+          ++   +    +        
Sbjct: 230 QVSVSGTDLNRLYALTGLALPNTPPYKISGHLSRKGERFDFNKLTGRVGDSD----VSGD 285

Query: 305 TKVSQDEENLLNFSENGAESMHDLNETD 332
             V   +        +      D ++  
Sbjct: 286 LFVLMGKARPY-LEADLQSQRLDFDDLG 312


>gi|26991537|ref|NP_746962.1| AsmA family protein [Pseudomonas putida KT2440]
 gi|24986621|gb|AAN70426.1|AE016684_5 conserved hypothetical protein [Pseudomonas putida KT2440]
          Length = 688

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/356 (12%), Positives = 104/356 (29%), Gaps = 32/356 (8%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           R+L+        VL     V    DW   +     + +  + +  A+ G + +H      
Sbjct: 6   RILVWTLASLLTVLAILVVVIATFDWNRVKPLLNEKVSEALHRPFAINGNLAVHWRTEPE 65

Query: 58  ------ILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P    +D+ +   E         +E +  R   LPL+  +I +  + + +
Sbjct: 66  EGGWRAWVPWPHFIAEDLTLGNPEWLKEPKMVGLERVEFRLAPLPLMFQQISIPRINLTK 125

Query: 110 PHLNFYLSSKGVSNW-----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
           P  +    + G +NW      + ++       + +  I    G +   DQ       +  
Sbjct: 126 PTASLTRLADGRANWVFDFGPKDENAEPSKWQLDIGAIGFDQGNVSFDDQTLKTSMKVQI 185

Query: 165 LNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITAN--FPAKNKAIS 218
             L     F  I+   S +   G    +   +  G +  +  +           ++ +  
Sbjct: 186 DPLGKPIPFSEIVGKASAEKAGGAQDYAFGLKAQGRYKGQPVSGTGKIGGLLALQDASQP 245

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLS 273
             +Q         + L G L              ++G     L                 
Sbjct: 246 FPLQADVRIADTHVVLAGTLTDPRNLGALDLRLRLSGASLGNLYPLTGVTLPDTPAYSTD 305

Query: 274 GNFKISDGNVRISRYKLQS--ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
           G+ + +    + + +  Q        S    +   V+      L+ +    + +  
Sbjct: 306 GHLRANLQAAQGASFNYQGFNGKIGDSDIHGDLAFVASQPRPKLSGNLVSNQLLFK 361


>gi|295098202|emb|CBK87292.1| Uncharacterized protein involved in outer membrane biogenesis
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 608

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/378 (11%), Positives = 110/378 (29%), Gaps = 51/378 (13%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70
            L  V++ G   + L ++  DFR    RQ     G ++ + G ++ H+ P  S+    + 
Sbjct: 2   ILLVVLVAGLSALVLLVNPNDFRAYMVRQVEARSGYELKLDGPLRWHVWPQLSILSGRMS 61

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---- 126
           +            + + +    +PLLS +++V  + +    +     ++ V         
Sbjct: 62  LIAPGAAQPLVTADNMRLDVALIPLLSHQLQVEQVMLKGAVIQLTPQTEAVRQADAPVAP 121

Query: 127 -----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                     D   +  +  + V    +     E D+   + ++NL++     +      
Sbjct: 122 RENTLPDVPSDTGWSFDIGNLKVADSVLVF-QHEDDEQITVRNINLRMEQDANH------ 174

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                                 F    N   ++  +S+   +    YP  +         
Sbjct: 175 -----------------QATMEFSGRINRNQRDLNLSMNANVNASDYPHQLTADVQ---- 213

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
                    + + G       +   A +  +   +      + ++   LQ+    + +  
Sbjct: 214 ------QLNWQLTGADLPAKGI---AGQGTMQAVWHEERKQLELNALNLQA----NDSAL 260

Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361
             +  V+ DE+          +   + N                + +  +  S       
Sbjct: 261 KGQASVTLDEKPKWVLDLQFDKLNLE-NLLPPQPVNATDEGATQVGQSQVTQSRPVISSN 319

Query: 362 DNSHDKENQENFSGDKMI 379
            +  D      F+ D ++
Sbjct: 320 LDQPDYNGLRGFTADILL 337


>gi|325982615|ref|YP_004295017.1| AsmA family protein [Nitrosomonas sp. AL212]
 gi|325532134|gb|ADZ26855.1| AsmA family protein [Nitrosomonas sp. AL212]
          Length = 654

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/370 (12%), Positives = 114/370 (30%), Gaps = 36/370 (9%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIEG 85
           +W   R    +Q +    +   + G + +     P +  + I+++           ++  
Sbjct: 26  NWNWARAIVAQQISDFTDRDFTINGNLTVDWSLTPHIRLEQIQLENAAWSKQPNMLELAA 85

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI---LEKI 142
           L +R + + L+ G +   ++ + +PH+    S +G +NW     T +         +E++
Sbjct: 86  LDVRIDLIELIKGRMLFPEIILTRPHIILQKSPQGEANWEFTADTGNPESKTDIPLIERL 145

Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV-IAEGTGNFDNKR 201
            +  GR+   D               +    +  ++ +   + +         G      
Sbjct: 146 RITEGRLVYQD-------------FSVDTEIITTLATIKEATHEEEFTELYAEGKLKGHP 192

Query: 202 SAFKITANF--PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259
               + A      +   I   + L        + + G +    +       F++ G   +
Sbjct: 193 LQINLKAGPLVALREADIPYPLILSLQTGKTRVKVKGTVIQPLQLKGLDLQFAIQGPNPE 252

Query: 260 LLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314
           LL+  L          RL G+        +IS    Q    +          V   E   
Sbjct: 253 LLSPVLGLPMPSLPPYRLEGDLSHHGHTWQISNLNGQVGDSD----LAGTISVKLSETIP 308

Query: 315 LNFSENGAESMHDLNETD-----FFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369
                +      DL++         +    +  +   KK   + + +     D+S D + 
Sbjct: 309 F-IQADLRSKTIDLDDIGPLIGLAPDTGAGETASSAQKKKAKEETESPFVLPDDSIDFKE 367

Query: 370 QENFSGDKMI 379
            +  + D  +
Sbjct: 368 LQTINADITL 377


>gi|313500839|gb|ADR62205.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 688

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/356 (11%), Positives = 102/356 (28%), Gaps = 32/356 (8%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           R+L+        VL     V    DW   +     + +  + +  A+ G + +H      
Sbjct: 6   RILVWTLASLLTVLAILVVVIATFDWNRVKPLLNEKVSEALHRPFAINGNLAVHWRTEPE 65

Query: 58  ------ILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P    +D+ +   E         +E +  R   LPL+  +I +  + + +
Sbjct: 66  EGGWRAWVPWPHFIAEDLTLGNPEWLKEPKMVGLERVEFRLAPLPLVFQQISIPRINLTK 125

Query: 110 PHLNFYLSSKGVSNW-----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
           P  +    + G +NW      + ++       + +  I    G +   DQ       +  
Sbjct: 126 PTASLTRLADGRANWVFDFGPKDENAEPSNWQLDIGAIGFDQGNVSFDDQTLKTSMKVQI 185

Query: 165 LNLQ----ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAIS 218
             L      S       +  +  +   +   +  G +  +  +           ++ +  
Sbjct: 186 DPLGKPIPFSEIVGKTSAEKAGGAQDYAFALKAQGRYKGQPVSGTGKIGGLLALQDASQP 245

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLS 273
             +Q         + L G L              ++G     L                 
Sbjct: 246 FPLQADVRIADTHVVLAGTLTDPRNLGALDLRLRLSGASLGNLYPLTGVTLPDTPAYSTD 305

Query: 274 GNFKISDGNVRISRYKLQS--ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
           G+ + +    + + +  Q        S    +   V+      L+ +    + +  
Sbjct: 306 GHLRANLQAAQGASFNYQGFNGKIGDSDIHGDLAFVASQPRPRLSGNLVSNQLLFK 361


>gi|197284547|ref|YP_002150419.1| assembly protein [Proteus mirabilis HI4320]
 gi|194682034|emb|CAR41532.1| putative outer membrane assembly protein [Proteus mirabilis HI4320]
          Length = 643

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/356 (12%), Positives = 103/356 (28%), Gaps = 51/356 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R L  L  L  V+L G  T+ L I+  DFR     +     G K+ ++  ++ H+ P 
Sbjct: 1   MKRFLTTLAILLVVILAGLTTLVLLINPNDFRGYLVERVEKQSGYKLTLQDDMRWHVWPK 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +            + + +  E  PLLS ++ V ++ +    +     SK +
Sbjct: 61  LSIISGKMSLTAPGAEQPLITADNMRLDVELWPLLSHQLEVKEVMLKGAVVRQTPESKAI 120

Query: 122 SNWFQRKSTMDMI-----------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
                     +               + + K+ +    I     +  +   L D+NL + 
Sbjct: 121 PKITPPSVANEDSTRPIIEPKTNRWQLNIAKVRISDSLIIW-QTKGGEQLNLRDINLLLK 179

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                                                 N   +   +++        YP 
Sbjct: 180 TDDK-----------------------KQINLEMSTKINRDRRELMLNVVANADMSGYPY 216

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
            I             I    ++++G       +        L+ +F I + +V +     
Sbjct: 217 QISGN----------IAQLDYALSGIGLPAQGISG-----NLTSDFNIKNDSVNVIALN- 260

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346
              +  + +           ++N       G     +    +  +    +  +  L
Sbjct: 261 NLNMTANESQLQGSITAELAKKNRYQVELTGDTLNLNTLLPELAQPNSSETASLTL 316


>gi|288961565|ref|YP_003451875.1| hypothetical protein AZL_c00380 [Azospirillum sp. B510]
 gi|288913845|dbj|BAI75331.1| hypothetical protein AZL_c00380 [Azospirillum sp. B510]
          Length = 678

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/344 (13%), Positives = 102/344 (29%), Gaps = 39/344 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R     L  +  ++  G   +    DW D R    R+A+  + +++A+ G +++ +    
Sbjct: 10  RWTGYALLGVAGLIAAGIAAMLALFDWNDARGVIARRASAALNREVAIDGDLRVRLGDPI 69

Query: 63  SVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            +  + +R+   +       ++I  L       PLL G+  + ++ I  P L    + KG
Sbjct: 70  RIHLEGLRVANADWARDGSMAEIRALDATLRPWPLLRGDWELPEVNIQGPTLILEKNGKG 129

Query: 121 VSNWFQRKS------------TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
            +NW                   D     ++ ++ +  GR++  D  S       D++  
Sbjct: 130 EANWEFGPPTLEKEVAKRAATPDDRGDIPVIGRLAIAEGRLRYRDPTSGI-----DIDNA 184

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP--AKNKAISLKIQLFPL 226
           I          +        V   G G+F  +              ++      +++   
Sbjct: 185 IDTATGGDGGDV--------VRLTGKGSFAGRPFTLAAEGGSLLYLRDDPKPYPLKVEAA 236

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDG 281
                  + G++    K         + GD    +   L     +     +SG+      
Sbjct: 237 VGATRGHIEGSVAEPVKLEGVDLSVRLGGDDMAEIFPILGIPAPKTRPYSISGHLGREGT 296

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES 324
                    +    +          V    +  +L         
Sbjct: 297 VWSFRGMNGKVGESD----LSGDLLVDTGADRPMLRADLTSNRL 336


>gi|295687639|ref|YP_003591332.1| AsmA family protein [Caulobacter segnis ATCC 21756]
 gi|295429542|gb|ADG08714.1| AsmA family protein [Caulobacter segnis ATCC 21756]
          Length = 669

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 50/345 (14%), Positives = 111/345 (32%), Gaps = 33/345 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61
           RR LIG+G   + +        +  DW   R    R A+  + +++A+ G +++H   F 
Sbjct: 6   RRALIGIGSALA-LAAAVIAFLVIFDWNWLRGPIGRYASAQMQREVAITGDLRVHPWSFS 64

Query: 62  PSVFFKDIRIDQKEDGSF-------ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
           P      +RI Q    +         ++++ ++++ + LPLL G++ +  + +D+P +  
Sbjct: 65  PKAEAYGVRIGQPAWAAKVDPEAGQMAQVQRIALQIKILPLLRGDVILPFLALDKPDVRL 124

Query: 115 YLSSKGVSNWFQRKSTMDMIHNV-ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
                G +NW       D    +  +++  +  G+++  D++   ++             
Sbjct: 125 LRDKDGKANWTFGARKSDKPLKLPAVQRFVINEGKLRFDDRQRGTLFV------------ 172

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI-SLKIQLFPLAYPIII 232
            ++ +        G  + EG G  +      +I+                    A    I
Sbjct: 173 GSVNAQERAGDRGGRFVLEGNGTLNRSAFVAEISGGPLLNISPSRPYPFDAQVRAGATRI 232

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISR 287
              G +        +    +V+G     L+             R+SG            +
Sbjct: 233 VAHGQITRPFDLGRFETDLTVSGADLNRLHDLTGLTLPNTPPYRVSGRMVRKGPRYDFQK 292

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETD 332
              Q    +          V    E              D ++  
Sbjct: 293 LTGQIGDSD----IAGDLFVLTGRERPY-LEAELRSKRLDFDDLG 332


>gi|332766411|gb|EGJ96620.1| asmA family protein [Shigella flexneri 2930-71]
          Length = 606

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 49/379 (12%), Positives = 117/379 (30%), Gaps = 59/379 (15%)

Query: 14  SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73
            V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P  S+    + +  
Sbjct: 2   VVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQLSILSGRMSLTA 61

Query: 74  KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS---------NW 124
           +       + + + +    LPLLS ++ V  + +    +     ++ V          + 
Sbjct: 62  QGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAVRSEDAPVAPRDN 121

Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
                + D   +  +  + V    +     E D+   + ++ LQ+     +  S      
Sbjct: 122 TLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQDPQHRGS------ 174

Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
                              F    N   ++  ISL   +    YP           +   
Sbjct: 175 -----------------FEFSGRVNRDQRDLTISLNGTVDASDYP----------HDLTA 207

Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
            I    + + G       ++    +      ++ S   +  ++  L +    + +    +
Sbjct: 208 AIEQINWQLQGADLPKQGIQ---GQGSFQSQWQESHKRLSFNQISLTA----NDSTLSGQ 260

Query: 305 TKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEE 360
            +V+  E+          +   D    LNET   E    +             S    E 
Sbjct: 261 AQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLPRPVISSRIDEP 320

Query: 361 KDNSHDKENQENFSGDKMI 379
                  +  + F+ D ++
Sbjct: 321 AY-----QGLQGFTADILL 334


>gi|167035903|ref|YP_001671134.1| AsmA family protein [Pseudomonas putida GB-1]
 gi|166862391|gb|ABZ00799.1| AsmA family protein [Pseudomonas putida GB-1]
          Length = 688

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/356 (11%), Positives = 98/356 (27%), Gaps = 32/356 (8%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           R+L+        +L     V    DW   +     + +  + +  A+ G + +H      
Sbjct: 6   RILVWTLTSLFTLLAILVVVIATFDWNRVKPLLNEKVSEALHRPFAINGNLAVHWRTEPE 65

Query: 58  ------ILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P    +D+ +   E         +  +  R   LPL+  +I +  + + +
Sbjct: 66  EGGWRAWVPWPHFIAEDLTLGNPEWLKEPDMVGLARVEFRLAPLPLVFQQISIPRINLTK 125

Query: 110 PHLNFYLSSKGVSNW-----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
           P  N    + G +NW      + ++       + +  I    G +   DQ       +  
Sbjct: 126 PTANLTRLADGRANWVFDFGPKDENAEPSKWQLDIGAIGFDQGNVSFDDQTLKTSMKVQI 185

Query: 165 LNLQ----ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAIS 218
             L      S       +  +  +   +   +  G +  +  +           ++ +  
Sbjct: 186 DPLGKPIPFSDIVGKASAEKAGAAQDYAFGLKAQGRYKGQPVSGTGKIGGLLALQDASQP 245

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLS 273
             +Q         + L G L              ++G     L                 
Sbjct: 246 FPLQADVRIADTHVVLAGTLTDPRNLGALDLRLRLSGASLGNLYPLTGVTLPDTPAYSTD 305

Query: 274 GNFKISDGNVRISRYKLQS--ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
           G    +    + + +  Q        S    +   V+      L+      + +  
Sbjct: 306 GRLSANLHAAQGASFNYQGFNGKIGDSDIHGDLAFVASQPRPKLSGKLVSNQLLFK 361


>gi|327394460|dbj|BAK11882.1| protein AsmA precursor [Pantoea ananatis AJ13355]
          Length = 607

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 43/332 (12%), Positives = 98/332 (29%), Gaps = 47/332 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RRV+  L  L  VV+ G   + + ++  DFR    +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRVITTLAILLVVVVAGLTALVMLVNPNDFRSYMVQQVEQRSGYQLTINGDLRWHVWPK 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +            + + +    LPLLS ++ V  + +    +     S   
Sbjct: 61  LSILAGRMSLTAPGAAQPVVSADNMRLDVNLLPLLSHQLSVSQVMLKNAVVRVTPESTAQ 120

Query: 122 SNWFQR------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
                       +       +  + K+ +               +   +LNL +     +
Sbjct: 121 VPQNAPRGPHNSEPASSDRWSFDIGKLQLMDSLFIWQQP-GGDAFTFRNLNLNMEQDQSS 179

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
           + +                            +     +   I+LK Q     YP  +   
Sbjct: 180 LAT-----------------------INLSTSLTRNQRTAMINLKGQFDKSQYPHQLSGQ 216

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
                          ++++G       ++ +       GN+      V +S  KL +   
Sbjct: 217 LE----------QLDYALSGASLPPQGIKGTL---SFQGNWNGDRNTVALSDLKLNA--- 260

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
            + +      +        L+   +      D
Sbjct: 261 -NDSVLSGSAQGDLTAPQKLSLDLHATSLDMD 291


>gi|209544790|ref|YP_002277019.1| AsmA family protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|209532467|gb|ACI52404.1| AsmA family protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 674

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/396 (13%), Positives = 109/396 (27%), Gaps = 46/396 (11%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR  LIGLG L ++++V          W  F    + +A+  + ++  +   + + +   
Sbjct: 16  LRPWLIGLGSLVALIVVLILV----WSWDWFIPLVDSRASAALHRRTTIA-HLHVRLGRI 70

Query: 62  PSVFFKDIRIDQKEDG----SFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYL 116
            +V   D+ IDQ           +     ++  +    L  G + +  + +D P  +   
Sbjct: 71  VTVTADDLTIDQPAGFEDEKQPFATARHATVAIDAWDWLRHGTLSLPLIALDGPRADIVR 130

Query: 117 SSKGVSNWFQRKSTMDMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
              G  N     +TM               + ++ +  G +++ D               
Sbjct: 131 RKDGPGNATTSNTTMGPPAQPGAPATKWPTIGELRITDGALRVADAPLRAEM-------- 182

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPL 226
             A  L+   P   +  +G ++ + TG +  +               + A    + +   
Sbjct: 183 --AATLHTTPPNPAEGDRGRIVVDATGRYAAQPMTLHAVGGALLGLMDPAHPYPLDVTVR 240

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDG 281
             P    L G +                G    LL               L+G    S  
Sbjct: 241 NGPTTAALAGTIDDPFHFAGARLTLHFNGPDMSLLYPLTGIPIPVTPAYDLTGRLDYSRR 300

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341
            +R +  + +    +          V   +               DL +   F    +K 
Sbjct: 301 MIRFTDLRGRLGSSD----IGGAISVDPHQAVPF-VDATLHSHRVDLVDLGGFIGARRKG 355

Query: 342 KNDDLKKDDIQYSVNKKEE--KDNSHDKENQENFSG 375
                     Q +  K      D   +       + 
Sbjct: 356 AKT----PAEQAAEAKDPNVLPDTPVNIPKLRAINA 387


>gi|262040089|ref|ZP_06013346.1| AsmA suppressor of OmpF assembly mutants [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259042561|gb|EEW43575.1| AsmA suppressor of OmpF assembly mutants [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 612

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 107/335 (31%), Gaps = 53/335 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+L  L  L +V++ G  ++ L ++  DFR     +     G ++ + G ++ H+ P 
Sbjct: 1   MRRILTTLMILLAVIVAGLTSLVLLVNPNDFRAYMVHEVAERSGYQLDLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS +++V  + +    +     ++ V
Sbjct: 61  LSILSGRMTLTARGAEEPVIRADNMRLDVALLPLLSHQLQVKQVMLKGAVIQLTPKTEAV 120

Query: 122 ---------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +     +  D   +  + ++ V    +     E+ +   + D+ LQ+   
Sbjct: 121 RDSSAPVVPHDNTLPLAPEDRGWSYDVRQLQVAD-SVLFFQHENGEQVTVRDIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +            +V   G  N                ++ A+S    +    YP  +
Sbjct: 180 ENHR----------ATVDFSGRVN----------------RDLALSFSATVQGGDYPHSL 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                             + + G        +    +  L  +++  D  +R     L  
Sbjct: 214 KADFT----------QLSWQLRGAELP---PDGINGQGSLQASWQEDDKTLRFDNLNL-- 258

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               + +       V   +    +   +      D
Sbjct: 259 --MANRSTVTGSGSVVLGDRPDWSLDLHATTLDLD 291


>gi|54308365|ref|YP_129385.1| AsmA protein [Photobacterium profundum SS9]
 gi|46912793|emb|CAG19583.1| Hypothetical AsmA protein [Photobacterium profundum SS9]
          Length = 589

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 46/424 (10%), Positives = 108/424 (25%), Gaps = 63/424 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L  L  +  V++VG   +   +D   F+     Q     G+ + + G I     P 
Sbjct: 1   MKKLLYVLLAIVLVIVVGIGALLALVDPNQFKPLLSEQVKKATGRDLVINGDISWRFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                 +      +    +   K+    +    +PL S  + + ++ ++   +       
Sbjct: 61  VGFSLGETEFKNPQGFAEADLVKLGSAELSVSVMPLFSQHLEIGNISLNDARVFIQTRKD 120

Query: 120 GVSNWF----------------------------QRKSTMDMIHNVILEKIHVKGGRIKI 151
           GVSN                                +        + L  + V     ++
Sbjct: 121 GVSNLDGLGEQAAVEGTVTEDTNGTSSEPAIDQPSVEDEPMQPWTISLAGVEVVNASAEV 180

Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS--------- 202
            D ++     +  LN ++        +  + D    +     T   D++           
Sbjct: 181 RDDKAGTATIIDSLNFKLDTFSPGEWTQANFDITGKNTELSFTAKGDSQLLIATDYKSGE 240

Query: 203 ------------------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN--LFWNE 242
                             +  +  +        ++          +  D  G      + 
Sbjct: 241 LKALNVTASAKDSVNDIQSLVLGVDHFKVGDWANITFAAKGQIPDLAFDANGATRFKISA 300

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
              +            K   L     K  L+ +          +  + +          +
Sbjct: 301 DYNLAELDKLTLSSDLKGSTLPRPEMKVGLNADATYDVAKGLATLSRFE--TSIDELVLN 358

Query: 303 NKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEE 360
            K         ++ F  N      D  L      ++  K+             +V+K EE
Sbjct: 359 GKGSFKNAIIPVIRFDVNSDNIDLDAFLGTASSAKDNAKEEIGSAPSTGGETSTVSKSEE 418

Query: 361 KDNS 364
            D S
Sbjct: 419 PDLS 422


>gi|218781545|ref|YP_002432863.1| AsmA family protein [Desulfatibacillum alkenivorans AK-01]
 gi|218762929|gb|ACL05395.1| AsmA family protein [Desulfatibacillum alkenivorans AK-01]
          Length = 714

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 57/412 (13%), Positives = 126/412 (30%), Gaps = 49/412 (11%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++  +  +  L  + + G   V   +D   F+ D E       G+K+ + G +++ I   
Sbjct: 7   IKWTIGIIAALVVLCVGGIAYVLSTLDLNQFKADIETNVQNATGRKLNLAGDVELKIGFS 66

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           P++  + +     E G     + I+ L ++   LPLLSG +++  + + +P +    +  
Sbjct: 67  PALTVESVSFANAEWGSQPNLASIDRLEVQVAVLPLLSGAVKIKRLILIKPEILIETNKD 126

Query: 120 GVSNWF--------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159
           G SN                                N+ +E+  ++  R+   D +S   
Sbjct: 127 GKSNLDFGDSEKTAASSESSPKEATEPSSGQTGSGLNIDVEEFVLQDARLTYKDGQSGSS 186

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAI 217
             L             +    +       +    +G ++ +             A N   
Sbjct: 187 QEL------------ALSLVKASLDSANKLTLSVSGAYNGQPFEVNGETGGLEDAMNPKA 234

Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RL 272
              + +   A   ++ + G +         +  F+  G     LN    A         L
Sbjct: 235 DWPLNITAKAGGAVVTVKGAIQDLNGPAGIALAFNAEGKSLADLNALSGASLPDLGKYAL 294

Query: 273 SGNF-KISDGNVRISRYKLQSILPNSSTDEDNKTKVS-QDEENLLNFSENGAESMHDLNE 330
           SG        + +I+  K Q    +       +  +    +   +  S            
Sbjct: 295 SGKLADAGSKSYKITGLKGQLGESD----ISGEAALDMSGKRPNIVLSLTSKALDLRPFL 350

Query: 331 TDFFE--EEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMIL 380
            D  +  E+ K     + KK   +   N     D     + + +   + + L
Sbjct: 351 PDKSQEVEKPKSKPAAEPKKKSDRVLPNDPLPTDLLLLADAKGDIKVETVQL 402


>gi|304397438|ref|ZP_07379316.1| AsmA family protein [Pantoea sp. aB]
 gi|304355056|gb|EFM19425.1| AsmA family protein [Pantoea sp. aB]
          Length = 607

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/386 (13%), Positives = 112/386 (29%), Gaps = 49/386 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++RV+  L  L  VV+ G   + L ++  DFR    +Q     G ++ V   ++ H+ P 
Sbjct: 1   MKRVITTLAILLVVVVTGLSALVLLVNPNDFRAYMVQQVEQRSGYRLEVSNDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +            E + +  +  PLLS ++ V  + +    +     S   
Sbjct: 61  LSILAGRMSLTAPGATQPLVSAENMRLDVDLWPLLSHQLSVSQVLLKNAIVRVTPDSSAQ 120

Query: 122 S-------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                         ++     +  + K+ V    +       D+ Y   DLN+ +     
Sbjct: 121 PARNAPQGPRDAEPASPSTGWSFDIAKLRVADSLLIWQQPGGDE-YNFRDLNITMDQDAN 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
            + +                        +   T     +N  ++LK QL    YP  +  
Sbjct: 180 KLAT-----------------------LSLSTTLMRNQRNATLNLKGQLDAAQYPHRL-- 214

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                      +    +S++G       ++ S     L G +         S  +L +  
Sbjct: 215 --------TGQLQQLDYSLSGADIPSQGIKGSL---SLQGEWNGDRQQFSFSGLQLTA-- 261

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-LNETDFFEEEEKKNKNDDLKKDDIQY 353
             + +    +          L      +    D L  +    E          +   I  
Sbjct: 262 --NDSTLTGQGSGHVLPPQQLALDLKASNLNLDNLLTSAPVSEAPGAQHATVARSPVIAA 319

Query: 354 SVNKKEEKDNSHDKENQENFSGDKMI 379
              +       +D +       +  +
Sbjct: 320 PRERTNADSPLNDMDLALKLQANNAV 345


>gi|104783840|ref|YP_610338.1| hypothetical protein PSEEN4906 [Pseudomonas entomophila L48]
 gi|95112827|emb|CAK17555.1| conserved hypothetical protein, AsmA family [Pseudomonas
           entomophila L48]
          Length = 686

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 40/359 (11%), Positives = 99/359 (27%), Gaps = 38/359 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58
           R+L+      + +L     V    DW   +     + +  + +  A+ G + ++      
Sbjct: 6   RILLWTFATLATLLAILVVVIATFDWNRVKPLLNEKVSEALHRPFAINGNLAVNWRTEPE 65

Query: 59  -------LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P    +D+ +   +         +E +  R   LPL+   I +  + + +
Sbjct: 66  ERGWRAFVPWPHFIAEDLTLGNPDWLKEPRMVGLERVEFRLSPLPLIVQRISIPRIDLVK 125

Query: 110 PHLNFYLSSKGVSNW-----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
           P  +    + G +NW      + ++       + +  I    G +   DQ       +  
Sbjct: 126 PSASLVRLADGRANWVFDFGPKDENAPPSKWELDIGAIGFDQGNVSFDDQTLKTSMKVQV 185

Query: 165 LNLQ----ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAIS 218
             L      S       +     +   +   +  G +  +  A           ++ +  
Sbjct: 186 DPLGKPIPFSDIVGKERAEKVGKAQDYAFGFKAQGRYKGQAVAATGKIGGLLALQDASQP 245

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLS 273
             +Q         + L G L             +++G     L                 
Sbjct: 246 FPLQADARIGDTRVVLAGTLTDPRNLGALDLRLALSGSSLGNLYPLTGVTLPDTPAYSTD 305

Query: 274 GNFKIS-----DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
           G+   +         R   +  +    +   D      V+      L+      + +  
Sbjct: 306 GHLTANLHDPAGAQFRYEGFNGKIGDSDIHGDL---AFVASQPRPKLSGKLVSNQLLFK 361


>gi|114327461|ref|YP_744618.1| asmA family protein [Granulibacter bethesdensis CGDNIH1]
 gi|114315635|gb|ABI61695.1| asmA family protein [Granulibacter bethesdensis CGDNIH1]
          Length = 665

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/395 (13%), Positives = 117/395 (29%), Gaps = 57/395 (14%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           ++ LI   F    V  GA  + L  DW  FR     Q +  +G+ +++     +H     
Sbjct: 8   KKWLISTAF----VCGGAVALILLWDWNWFRPLVASQLSQALGRNVSLT-HFNLHPGRIT 62

Query: 63  SVFFKDIRIDQKEDGS-----------------FESKIEGLSMRAEFLPLLSGE-IRVFD 104
           SV  + +R+ Q +                      ++IE L +  + L  L    I +  
Sbjct: 63  SVELEGVRVAQPDGFPMPPSSDGKQSGQQNTENEFARIEHLEIEVDVLRYLQEHLIAIPR 122

Query: 105 MYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI--------LEKIHVKGGRIKIIDQES 156
           + + +P  +   +    +NW       +   +          +  +H++GG I   D   
Sbjct: 123 IALTKPAFHLIRTEDNRNNWTFPSGKNEDKSDADTHKRASPEIGTLHIEGGSILFQDAPL 182

Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKN 214
                ++             ++  S  + K ++IAE  G++  +     + A      + 
Sbjct: 183 KADVSIT-------------LATGSDSTGKNALIAEAKGSYAGQPMTGGLVAGDVLTLRQ 229

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR--- 271
                 + L     P    L G +             ++ G     L         +   
Sbjct: 230 DHTVYPLSLHLENGPTKGSLRGTIADPLHFAGADLTLTLKGADMAALYPLTGIPIPQTPP 289

Query: 272 --LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
             + G+   ++  +R   +       +     +    V+      +  + +      DL+
Sbjct: 290 YDIEGHMTYAEQRIRFENFTGHVGSSD----LNGSIIVAPSGARPV-VTADLHSRKVDLD 344

Query: 330 ETDFFEEEE-KKNKNDDLKKDDIQYSVNKKEEKDN 363
           +   F      K        +  +     +     
Sbjct: 345 DLGGFIGSTPGKTTTPGQTLEQKREVAKAEASPQL 379


>gi|187927817|ref|YP_001898304.1| AsmA family protein [Ralstonia pickettii 12J]
 gi|187724707|gb|ACD25872.1| AsmA family protein [Ralstonia pickettii 12J]
          Length = 765

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 51/358 (14%), Positives = 99/358 (27%), Gaps = 59/358 (16%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI----- 58
           ++ +GL     V++  A    L  DW   +     + +  +G+  A+ G + +       
Sbjct: 6   KLALGLVITPVVIVAAAVFFVLTFDWNRAKPYLNDRISQAIGRPFAINGDLILTWKKPQG 65

Query: 59  -------LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P +   DI +   E       + I  L+   E LPLL+  I +  + +D 
Sbjct: 66  ESGWRAYVPWPRLIANDITVGNPEWAKQPNVATIHQLTFVLEALPLLAHRIVIPSVTLDT 125

Query: 110 PHLNFYLSSKGVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQE-----SDQ 158
           P +      +  +NW                  + L +I    G + + D       +  
Sbjct: 126 PAIALERDKQHRNNWTFNLAGSEGDDKKPSDWKLDLREIAFSKGSLALDDDIKRIHLAAT 185

Query: 159 VYFLSDLNLQISARFLNII-------------------------SPLSIDSIKGSVIAEG 193
           +  + +  L  +A    I                          +P        +   +G
Sbjct: 186 IDTVDNQALYSAASGAAIKSADQPTTAPTASGASASESAAQTPAAPDPQQPYGIAWTLKG 245

Query: 194 TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253
           T N        K       ++      +Q         IDL G L              +
Sbjct: 246 TYNNATINGTGKAGGVLRLQDAQRPYPLQADVTVGKTRIDLAGTLTNPASLTALDLRLHL 305

Query: 254 AGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
           +G     L                  RL G  +      R  ++  +    +      
Sbjct: 306 SGASMAQLYPLTGVVLPDTPPFDTRGRLIGELRRQGSTWRYEKFTGRVGGSDLGGTLT 363


>gi|292490054|ref|YP_003532948.1| hypothetical protein EAMY_3595 [Erwinia amylovora CFBP1430]
 gi|292901066|ref|YP_003540435.1| exported protein [Erwinia amylovora ATCC 49946]
 gi|291200914|emb|CBJ48051.1| putative exported protein [Erwinia amylovora ATCC 49946]
 gi|291555495|emb|CBA24006.1| Uncharacterized protein yhjG [Erwinia amylovora CFBP1430]
          Length = 685

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 49/381 (12%), Positives = 109/381 (28%), Gaps = 40/381 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           +V+  +G +F +++V   T     DW   +    R+ +  + +  A++G + +       
Sbjct: 6   KVISWIGGIFLLLVVVTVTAIALFDWNRLKPTINRKVSAEINRPFAIRGDLGVSWQRNRG 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        ++ +      L LLS +I +  + + Q
Sbjct: 66  EPGWRSWVPWPQVHAQDIMLGNPPDIPDVTMVHLQRVEATLSPLALLSRQIYLPWISLQQ 125

Query: 110 PHLNFYLSSKGVSNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P      ++ G +NW         Q+        +  L+ I    G +   D  +     
Sbjct: 126 PQARLVQTANGKNNWTFNLAGSDDQQAGKGSSAWSFRLDNIAFDRGTVSYRDAINQADVQ 185

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVI--AEGTGNFDNKRSAFKITAN--FPAKNKAI 217
           +    L     +  +             +     +G + N++ + +         +++  
Sbjct: 186 VMVDPLGKPVPYGQLAGGDDKQKGAADFVFGWRASGTYHNEKLSGEGKTGGMLSLRSQNT 245

Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS------- 270
              I          + + G +               +GD    L                
Sbjct: 246 PFPIAADVRNGTTRVRIAGTVRDPLNMGAVDIRLRFSGDTLANLYGLTGVLLPETPPYET 305

Query: 271 --RLSGNFKISDGN-VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES-MH 326
              L+  F+  +G   R   +       +                  L  +    +  M 
Sbjct: 306 DGHLTARFQQPNGAEFRYQNFNGHIGDSDIRGSL---AYRQGKPRPELTGTLESLQLRMA 362

Query: 327 DLNETDFFEEEEKKNKNDDLK 347
           DL         +   K    K
Sbjct: 363 DLGPLIGVNSGKDSAKTARAK 383


>gi|123442996|ref|YP_001006971.1| putative assembly protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122089957|emb|CAL12814.1| putative exported protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 615

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 43/388 (11%), Positives = 108/388 (27%), Gaps = 55/388 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+L  L  L  V++ G   + L ++  DFR    +Q     G  + ++G ++ H+ P 
Sbjct: 1   MRRLLTTLIILLVVLVAGMSALVLLVNPNDFRAYMVKQVERKSGYHLQLEGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +      +     E + +  +  PLLS ++ V  + +    +     S+  
Sbjct: 61  LSIIAGRMALTAPGAATPVVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLTPDSEAQ 120

Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                                 + + K+ V    +     ++DQ   + D+NL++     
Sbjct: 121 QQPGAPVAPTGNAPVDEQRAWKLDINKVQVADSLLIWQRTDNDQ-VNVRDINLELQQDAQ 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                             N   ++   S+   +    YP     
Sbjct: 180 R-----------------------QIHVTLASRINRNQRDVTFSMVADVDMSHYPQQF-- 214

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                      I    + + G    +  +     +  L  +++     + ++     +  
Sbjct: 215 --------GANISQFSYKLEGADIPVGGVS---GEGVLQASYQHDIQQLLLNELSFTA-- 261

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKND-DLKKDDI 351
             ++       K +         +        D             + +     +    I
Sbjct: 262 --NNNQLTGSAKATFGPVPEYVINLAADNLNLDAIFGWKPQNTVSTEDSAKPATVTAPVI 319

Query: 352 QYSVNKKEEKDNSHDKENQENFSGDKMI 379
               +         D +   +F+    +
Sbjct: 320 AIQADDDVG----QDLQALRDFTAQVTL 343


>gi|332704295|ref|ZP_08424383.1| AsmA family protein [Desulfovibrio africanus str. Walvis Bay]
 gi|332554444|gb|EGJ51488.1| AsmA family protein [Desulfovibrio africanus str. Walvis Bay]
          Length = 930

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 52/392 (13%), Positives = 124/392 (31%), Gaps = 39/392 (9%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65
           LI  G L ++V+V A  +P+ +D   ++    ++     G++ AV+G I + + P+  V 
Sbjct: 9   LIIFGVLVALVIVAALVLPMVVDPNQYKGRIAQEVQKATGREFAVEGDIDLSVFPWLGVE 68

Query: 66  FKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
              + +   E         +E   +R + LPLLS E+ V  + I  P +      +G +N
Sbjct: 69  IGRMHMANAEGFGDEPMIAVENAEVRVKLLPLLSRELIVDTVVIQNPVIRLAKDEQGRTN 128

Query: 124 W-------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
           W                     ++     +  V L  + V+ G +   D ++   Y + +
Sbjct: 129 WQDILDHMERQAAEKPAEPEQPQEPGASPLQKVELAGLEVENGLLVWSDMQAKASYEVRE 188

Query: 165 LNLQISARFLNII---SPLSIDSIKGSVIAEGTGNFD-------NKRSAFKITANFPAKN 214
           LN+ +    +        ++   +     A G    +       ++++A     N     
Sbjct: 189 LNVDVGELSMEAQPFPVSVNCAFVASQPQASGNLELNSVITLMLDQKTARAERTNLKLNI 248

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274
             +  + +    +    + +  N   +  Q +            +  +LE +++  R + 
Sbjct: 249 DKLVQQAEGSTQSVTGRLAVAANAVADWGQGVADIQGLKLTSDLR-ADLESASQGGRATQ 307

Query: 275 NFKISDG-------NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
                                ++  +   +    +     ++                 +
Sbjct: 308 KISAQSTVAADAVVRWVEGLARINGLALTTDYTVNMADSAAKAAGPQSIAGHVELVGNTE 367

Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359
            N T    + +    N     D        + 
Sbjct: 368 ANWTKSVAQVDGLKVNTTFTLDQPASQAGSQP 399


>gi|330501812|ref|YP_004378681.1| AsmA family protein [Pseudomonas mendocina NK-01]
 gi|328916098|gb|AEB56929.1| AsmA family protein [Pseudomonas mendocina NK-01]
          Length = 685

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 48/406 (11%), Positives = 120/406 (29%), Gaps = 46/406 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R+++  L  +F +++       +  DW   R     Q +  + +  A++G +++      
Sbjct: 5   RKLMGALFAIFLLLVAALMLFLVLFDWNRARPLINEQVSAALNRPFAIEGDLRVTWQREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P+P    + +R+   +   G     ++ + +R   LPLL   + +  + + 
Sbjct: 65  GQQGLSAWVPWPHFAAEHLRLGNPDWAQGDTFVSLDRVRLRLSPLPLLWKTVSIPSIELG 124

Query: 109 QPHLNFYLSSKGVSNW-------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
            P  +    + G +NW           S       + +  I    G++K+ D+ S+ V  
Sbjct: 125 APAADLQRLADGRANWVFDLGREQTDGSEEPSAWTLDIGTIAFDKGQVKLDDKLSNTVLE 184

Query: 162 LSDLNL--------QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213
                L         +       ++   + +   +   +  G+F  +             
Sbjct: 185 ALIEPLGEPIPFAEIVGKSTAERLAESDVSAQDYAFAWQTKGSFRGQSLTGNGKVGGLLA 244

Query: 214 --NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS- 270
             + +    +Q         I + G+L   +          +AG     L          
Sbjct: 245 LHDASQPFPLQADVRIGSTRIRVAGSLTDPQNLGALDLRLQLAGASLGHLYPLTGVTLPD 304

Query: 271 --------RLSGNF-KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321
                   RL  +         R   +  +    +   D      V++     L+     
Sbjct: 305 TPPYSTDGRLQADLRDADGATFRYLGFNGRIGDSDIHGDLT---FVARQPRPKLSGRLTS 361

Query: 322 AESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
            +     ++       +      +  + D Q +       +   D+
Sbjct: 362 NQ--LLFSDLAPLIGADSSADKRERGERDTQPANKALPISEFRTDR 405


>gi|162149552|ref|YP_001604013.1| outer membrane biogenesis protein [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161788129|emb|CAP57733.1| putative outer membrane biogenesis protein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 674

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 52/396 (13%), Positives = 110/396 (27%), Gaps = 46/396 (11%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR  LIGLG L ++++V          W  F    + +A+  + ++  +   + + +   
Sbjct: 16  LRPWLIGLGSLVALIVVLILV----WSWDWFIPLVDSRASAALHRRTTIA-HLHVRLGRI 70

Query: 62  PSVFFKDIRIDQKEDG----SFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYL 116
            +V   D+ IDQ           +     ++  +    L  G + +  + +D P  +   
Sbjct: 71  VTVTADDLTIDQPAGFEDEKQPFATARHATVAIDAWDWLRHGTLSLPLIALDGPRADIVR 130

Query: 117 SSKGVSNWFQRKSTMDMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
              G  N     +TM               + ++ +  G +++ D               
Sbjct: 131 RKDGPGNATTSNTTMGPPAQPGAPATKWPTIGELRITDGALRVADAPLRAEM-------- 182

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPL 226
             A  L+   P   +  +G ++ + TG +  +               + A    + +   
Sbjct: 183 --AATLHTTPPNPAEGDRGRIVVDATGRYAAQPMTLHAVGGALLGLMDPAHPYPLDVTVR 240

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDG 281
             P    L G +                G    LL               L+G    S  
Sbjct: 241 NGPTTAALAGTIDDPFHFAGARLTLHFNGPDMSLLYPLTGIPIPVTPAYDLTGRLDYSRR 300

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341
            +R +  + +    +          V+  +               DL +   F    +K 
Sbjct: 301 MIRFTDLRGRLGSSD----IGGAISVNPHQAVPF-VDATLHSHRVDLVDLGGFIGARRKG 355

Query: 342 KNDDLKKDDIQYSVNKKEE--KDNSHDKENQENFSG 375
                     Q +  K      D   +       + 
Sbjct: 356 AKT----PAEQAAEAKDPNVLPDTPVNIPKLRAINA 387


>gi|238793468|ref|ZP_04637093.1| hypothetical protein yinte0001_23740 [Yersinia intermedia ATCC
           29909]
 gi|238727241|gb|EEQ18770.1| hypothetical protein yinte0001_23740 [Yersinia intermedia ATCC
           29909]
          Length = 615

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 44/385 (11%), Positives = 110/385 (28%), Gaps = 55/385 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+L  L  L  V++ G   + L ++  DFR    +Q     G ++ ++G ++ H+ P 
Sbjct: 1   MRRLLTTLIILLVVLVAGMSALVLLVNPNDFRAYMVKQVEKKSGYQLQLEGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+      +      +     E + +  +  PLLS ++ V  + +    +     S+  
Sbjct: 61  LSIIAGRTALTAPGAAAPVISAENMRLDVKLWPLLSHQLEVKQVMLKGAVIRLTPESEAQ 120

Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                                 + + K+ V    +     ++DQ   + D+NL++     
Sbjct: 121 QQPDAPVAPSGNAPLNEQRAWKLDINKVQVADSLLIWQRTDNDQ-VNVRDINLELQQDAQ 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                       +     N   ++   S+        YP     
Sbjct: 180 R-----------------------QVHISLSSRVNRNQRDVTFSMVADADMRHYPQQFSA 216

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                      I    + + G    +  +     +  L  +++     + +++    +  
Sbjct: 217 N----------ISQFSYKLEGADIPVGGVS---GEGTLQASYQHDIQQLLLNQLSFSA-- 261

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKK-NKNDDLKKDDI 351
             ++       + +  E      +        D             K+  +   +    I
Sbjct: 262 --NNNQLTGTARATLGEVPDYVINLAADNLNLDTIFGWEPKSTVASKETPRQSAVTAPVI 319

Query: 352 QYSVNKKEEKDNSHDKENQENFSGD 376
               +         D +   +F+  
Sbjct: 320 AIQADDDVG----QDLQALRDFTAQ 340


>gi|146342441|ref|YP_001207489.1| hypothetical protein BRADO5600 [Bradyrhizobium sp. ORS278]
 gi|146195247|emb|CAL79272.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
          Length = 1275

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 60/421 (14%), Positives = 149/421 (35%), Gaps = 61/421 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++  L+GL   F + L+ A   P F+DW  FR  FE +A  I+G  + V G +   +LP 
Sbjct: 1   MQTTLLGLAIAFILALLAALIGPYFVDWNQFRPQFEAEAGKIIGVPVRVAGALDARLLPT 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P++  + +            + + L +      L+ GE +  ++ I     +  L +KG 
Sbjct: 61  PTLRLRQVTFGGANHLGK-LRADKLDVEFSLGDLMRGEWKANELTIGGMAADLGLDAKGQ 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +          +  + +++ ++  GR+ + D  S     L+D+           +    
Sbjct: 120 VDLPSASGR-FNLAALAIDRFNLT-GRVALHDAASRSTLELTDI-----------VFSGD 166

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
           + S+ GS+  +G  +    R  F+++++   ++  + + + + P   P++ D+ G + + 
Sbjct: 167 VRSLAGSLRGDGALSIRGGRYPFRLSSSQDKESNGLRVHLNIDPGERPVVADVEGLISFP 226

Query: 242 EKQPIYSGVFSV----------------AGDFSKLLNLEL-------------------- 265
            + P + G  ++                +G      +L                      
Sbjct: 227 NRSPKFEGALTLSSPPKEQVADKPAKDPSGKDPSGKDLSGKDQASRDQPSNDQPGRQAKS 286

Query: 266 ------SAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319
                 S    R++        + +  + ++     + S               +L  S 
Sbjct: 287 APATAPSGTPWRITTKIVGDQASAKFDQIEVSFGQEDRSLKFAGSGDAKFGAAPVLKASL 346

Query: 320 NGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
              +   D       E ++++     L    ++  + +        + +    F+ ++++
Sbjct: 347 AARQLDADKL-LAGDEVKDRRAIAPALVLPALRNWIAQLPTLPLPANVQ----FTTEQIM 401

Query: 380 L 380
           L
Sbjct: 402 L 402



 Score = 36.8 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 31/259 (11%), Positives = 66/259 (25%), Gaps = 30/259 (11%)

Query: 41  TLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEI 100
           +    + + ++G + +       V    ++    + GS + ++  ++  A         +
Sbjct: 476 SYRTQRPLRIRGDLNVAP---ERVAIDGLK-ADIDGGSVDGRVALINRPAGAGSRFEAAL 531

Query: 101 RVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           +   + +D               W    S    +    L                     
Sbjct: 532 KGDRLDLDAAMAMTRSLVGVTGEWPAEASVALDVGRAKLSG------------------Q 573

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            L  L  ++S     I          G V  EG G FD   +  ++T    A +    + 
Sbjct: 574 ELRPLTARVSYDPKTIAVDQIKFGQSGGVTTEGVGRFDRADATGRLTLTSMAGSLK-EIT 632

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV----AGDFSKLLNLELSAKKSRLSGN- 275
             + P A  I       L              +    A          L     +L G  
Sbjct: 633 ALVQPFAPQITARFDA-LATPAGAARLKLTLDLAKDPANADRSQAKAVLDLDAPQLKGQA 691

Query: 276 -FKISDGNVRISRYKLQSI 293
                     +  +++ +I
Sbjct: 692 TLTAKPSAAALRSFEVDAI 710


>gi|238795769|ref|ZP_04639283.1| hypothetical protein ymoll0001_16280 [Yersinia mollaretii ATCC
           43969]
 gi|238720495|gb|EEQ12297.1| hypothetical protein ymoll0001_16280 [Yersinia mollaretii ATCC
           43969]
          Length = 615

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 48/388 (12%), Positives = 114/388 (29%), Gaps = 61/388 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+L  L  L  V++ G   + L ++  DFR    +Q     G  + ++G ++ H+ P 
Sbjct: 1   MRRLLTTLIILLVVIVAGMSALVLLVNPNDFRAYMVKQVEKKSGYHLQLEGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+      +      +     E + +  +  PLLS ++ V  + +    +     S+  
Sbjct: 61  LSIIVGRTALTAPGATAPIVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVVRLTPDSEAQ 120

Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                                 + + K+ +    +     ++DQ   + DLNL++     
Sbjct: 121 QQPGAPVAPSGSAPINEHRAWKLDINKVQIADSLLIWQRTDNDQ-VNVRDLNLELKQDDQ 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                             N   ++   S+        YP     
Sbjct: 180 R-----------------------QVHITLSSRVNRNQRDVTFSMVADADMRHYPQQYSA 216

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                      I    + + G    +  +     +  L  +++     + +++    +  
Sbjct: 217 N----------ISQFTYKLEGADVPVGGVS---GEGTLQASYQSDIQQLLLNQLSFSA-- 261

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354
             ++       K +  +      +        D            + KN  + KD  + S
Sbjct: 262 --NNNQLTGSAKATLGDVPDYAINLAADNLNLD-------TIFGWQPKNAAVSKDASKQS 312

Query: 355 VNK------KEEKDNSHDKENQENFSGD 376
                    + ++D   D +   +F+  
Sbjct: 313 AVTAPVIAIQADEDVGQDLQALRDFTAQ 340


>gi|318605000|emb|CBY26498.1| Asma protein [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 615

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 47/390 (12%), Positives = 112/390 (28%), Gaps = 53/390 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+L  L  L  V++ G   + L ++  DFR    +Q     G  + ++G ++ H+ P 
Sbjct: 1   MRRLLTTLIILLVVLVAGMSALVLLVNPNDFRAYMVKQVERKSGYHLQLEGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +      +     E + +  +  PLLS ++ V  + +    +     S+  
Sbjct: 61  LSIIAGRMALTAPGAATPVVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLIPDSEAQ 120

Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                                 + + K+ V    +     ++DQ   + D+NL++     
Sbjct: 121 QQPGAPVAPTGNAPVDEQRAWKLDINKVQVADSLLIWQRTDNDQ-VNVRDINLELQQDAQ 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                             N   ++   S+   +    YP     
Sbjct: 180 R-----------------------QIHVTLASRINRNQRDVTFSMVADVDMSHYPQQF-- 214

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                      I    + + G    +  +     +  L  +++     + ++     +  
Sbjct: 215 --------GANISQFSYKLEGADIPVGGVS---GEGLLQASYQHDIQQLLLNELSFTA-- 261

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-----LNETDFFEEEEKKNKNDDLKKD 349
             ++       K +         +        D       +     E+  K         
Sbjct: 262 --NNNQLTGSAKATFGPVPEYVINLAADNLNLDAIFGWKRQNTVSTEDTTKPATVTAPVI 319

Query: 350 DIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
            IQ   +  ++     D   Q   + + +I
Sbjct: 320 AIQADDDVGQDLQALRDFTAQVTLTANNLI 349


>gi|317492493|ref|ZP_07950921.1| AsmA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919485|gb|EFV40816.1| AsmA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 622

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 49/392 (12%), Positives = 115/392 (29%), Gaps = 53/392 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  +  L  V+ VG   + L ++  DFR    ++     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTIVILLVVLAVGMTALVLLVNPNDFRSYMTKEVQQRTGYELQLDGSLRWHVWPR 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +            E + +     PLLS ++ V  + +    +     S   
Sbjct: 61  LSILSGRMSLTAPGAAQPVISAENMRLDVGLWPLLSHQLDVKQVMLKGAVIRLTPGSDAQ 120

Query: 122 S-------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                       R+ + D+   + ++K+ V+   +     + DQ   + D+NL I     
Sbjct: 121 KPENSPIAPSGSRELSSDVAWKLNIKKVQVRDSLLIWQQDKDDQ-INMRDINLSIDQDSA 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                             N   ++    L   +   +YP     
Sbjct: 180 R-----------------------QASIELSSRINRNQRDLNFKLAANVDLSSYPQRYS- 215

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                      + +  + ++G       +   A     + +++     + IS   + +  
Sbjct: 216 ---------AVVSNFDYQLSGVGLPTSGI---AGMGSATVSYQQQPQQIDISNLLVTANQ 263

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-----LNETDFFEEEEKKNKNDDLKKD 349
                       + ++  +        A    D        T+  +      +   L+  
Sbjct: 264 SQLQGRIQG--AMQENGTSAYKVDLQSAALNLDNLFGWTPPTEGADGSANTAEQATLRSP 321

Query: 350 DIQ--YSVNKKEEKDNSHDKENQENFSGDKMI 379
                 S  +  E     D   +     +++I
Sbjct: 322 VTSNPESTAQVGEMAFLRDFTAELKIQANEVI 353


>gi|156936313|ref|YP_001440229.1| hypothetical protein ESA_04213 [Cronobacter sakazakii ATCC BAA-894]
 gi|156534567|gb|ABU79393.1| hypothetical protein ESA_04213 [Cronobacter sakazakii ATCC BAA-894]
          Length = 685

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 48/388 (12%), Positives = 110/388 (28%), Gaps = 45/388 (11%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           +++  +  +F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KIISVVAGVFLLLVVVAIIIIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERNKD 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +D+ +    D        +  +      L LL+  + +  +   +
Sbjct: 66  EPGWRSWVPWPHVHAEDVVLGNPPDIPQVTMIHLPRVEATLAPLALLTKTVYLPWIKFQK 125

Query: 110 PHLNFYLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           P       S+  +NW           +      +  L+ I    GR+++ D  S     +
Sbjct: 126 PDAQLIRLSEKTNNWTFDMKQSEGEAAQQPSSWSFRLDNILFDQGRVRVDDNVSRADVEI 185

Query: 163 SDLNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITAN--FPAKNKA 216
               L     F  +                   +  G ++++              K++ 
Sbjct: 186 LIDPLGKPLPFNEVTGDKDKKGNDKVGDYVFGLKARGTYNDQPLRGSGKIGGMLALKSEG 245

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS------ 270
               +Q    +    +   G +               AG+    L               
Sbjct: 246 TPFPVQADLRSGDTRVAFVGTVNDPMNMGGVDLQLKFAGNSLGDLYELTGVLLPDTPPFE 305

Query: 271 ---RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQ-DEENLLNFSENGAESM 325
              RL        G+V     +  +    +           SQ      L       +  
Sbjct: 306 TDGRLVAKINSDKGSVYDYRGFNGRIGESD----IHGSLTYSQRKPRPKLEGDLESRQLR 361

Query: 326 H-DLNETDFFEEEEK--KNKNDDLKKDD 350
             DL      +      K+KN + KK +
Sbjct: 362 LADLGPLIGVDSGAGAEKSKNSEQKKGE 389


>gi|312114604|ref|YP_004012200.1| AsmA family protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311219733|gb|ADP71101.1| AsmA family protein [Rhodomicrobium vannielii ATCC 17100]
          Length = 1213

 Score =  136 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 61/326 (18%), Positives = 113/326 (34%), Gaps = 17/326 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R+L     L  +++  AFTVP F+DW   R D E  A+ + G+KI + G I I +LP 
Sbjct: 1   MGRLLATFATLLVLLIGAAFTVPAFLDWNALRPDIEEAASTLFGQKIRIVGDIDIALLPE 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P V    I  D           E L +      L+ G +    + + +P +    + +G 
Sbjct: 61  PHVRAAKIATDPAPGDKLALSAEALDLSLSLQGLIGGHVEASRLKLVRPVVIVQAARRGA 120

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           +      + + +     +  + V+GGR   +  E      LS ++             ++
Sbjct: 121 NRAGASAAGLALPFTADVRSLEVEGGRFTFV-PEHGAPLTLSGID-----------GKVT 168

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
             +      A     FD++R   ++ A     +  I L      L+   ++   G L  +
Sbjct: 169 APTRGAPYRANVKATFDDRRFDLRLMAQLAQDSG-IKLSGSATDLSSKTVLHADGVLRAS 227

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
              P + G  ++    +  L   L  +    S   K+   +  +S   L     N     
Sbjct: 228 F-APTFEGALTLNAPKTAGLGAPLDVQA---SARAKVDLDSAALSDLVLTLDGANRPQIL 283

Query: 302 DNKTKVSQDEENLLNFSENGAESMHD 327
             +  +          S        D
Sbjct: 284 AGRATIPFTGNAPAEISLQAKSLDAD 309


>gi|332161119|ref|YP_004297696.1| putative assembly protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665349|gb|ADZ41993.1| putative assembly protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330859362|emb|CBX69708.1| protein asmA [Yersinia enterocolitica W22703]
          Length = 615

 Score =  136 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 47/390 (12%), Positives = 112/390 (28%), Gaps = 53/390 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+L  L  L  V++ G   + L ++  DFR    +Q     G  + ++G ++ H+ P 
Sbjct: 1   MRRLLTTLIILLVVLVAGMSALVLLVNPNDFRAYMVKQVERKSGYHLQLEGDLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +      +     E + +  +  PLLS ++ V  + +    +     S+  
Sbjct: 61  LSIIAGRMALTAPGAATPVVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLIPDSEAQ 120

Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                                 + + K+ V    +     ++DQ   + D+NL++     
Sbjct: 121 QQPGAPVAPTGNAPVDEQRAWKLDINKVQVADSLLIWQRTDNDQ-VNVRDINLELQQDAQ 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                             N   ++   S+   +    YP     
Sbjct: 180 R-----------------------QIHVTLASRINRNQRDVTFSMVADVDMSHYPQQF-- 214

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                      I    + + G    +  +     +  L  +++     + ++     +  
Sbjct: 215 --------GANISQFSYKLEGADIPVGGVS---GEGLLQASYQHDIQQLLLNELSFTA-- 261

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-----LNETDFFEEEEKKNKNDDLKKD 349
             ++       K +         +        D       +     E+  K         
Sbjct: 262 --NNNQLTGSAKATFGPVPEYVINLAADNLNLDAIFGWKRQNTVSTEDTTKPATVTAPVI 319

Query: 350 DIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
            IQ   +  ++     D   Q   + + +I
Sbjct: 320 AIQADDDVGQDLQALRDFTAQVTLTANNLI 349


>gi|330828444|ref|YP_004391396.1| AsmA protein [Aeromonas veronii B565]
 gi|328803580|gb|AEB48779.1| AsmA protein [Aeromonas veronii B565]
          Length = 717

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 48/383 (12%), Positives = 108/383 (28%), Gaps = 60/383 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++++ L  +    L+   T+   ID   F+     Q     G+++ + G I     P 
Sbjct: 1   MKKIVLILLGIAVAALLAIVTLISLIDPNQFKPQLAEQVRKSTGRELVMAGEIDWRFWPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +  + + +            + E        LPL S  + V  + +   HL     + 
Sbjct: 61  LGLSLEKVALRNPAGFAEPDLVRFEQGEASVALLPLFSHRLEVGKVTLSGAHLFIQTKAD 120

Query: 120 GVSNWF------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           G SN                       +       + L+ + +      + D  S     
Sbjct: 121 GSSNLSGLIKDATADASEPVVPATPAPTADSKPWQISLQGVALSQASALVQDDRSGTSLR 180

Query: 162 LSDLNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRS--------------- 202
           L  L+L +         P+++ +       +   +G       +                
Sbjct: 181 LDRLDLDMGQLATGEWVPVALAAKGSADKLAFDVKGQTQIKLAQEVMASELKDLSLSGSL 240

Query: 203 --------AFKITANFPAKNKAISLKIQLF-----PLAYPIIIDLFGNLFWNEKQPIYSG 249
                   +F I  +  A  +  +L + L           +   L G L     + +   
Sbjct: 241 SAPSLRLDSFSIKGDRLAFGEWSNLTLALKGAKVEGQQALLAGSLEGTLKGRLDKEMKLA 300

Query: 250 VFS--VAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
             S  +     +   L     K +L+G    ++    + +S+  + +             
Sbjct: 301 ELSDVLLTAALEGDALPRPQMKLKLAGFARVELDKQLITLSKLVMSA----DEALLSGDG 356

Query: 306 KVSQDEENLLNFSENGAESMHDL 328
            V       + F  +G +   D 
Sbjct: 357 TVQLGATPAITFDLHGEKLDLDK 379


>gi|77456794|ref|YP_346299.1| AsmA [Pseudomonas fluorescens Pf0-1]
 gi|77380797|gb|ABA72310.1| putative membrane protein [Pseudomonas fluorescens Pf0-1]
          Length = 691

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 46/380 (12%), Positives = 112/380 (29%), Gaps = 43/380 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56
           R++ +       ++L     + +F DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIFVWTFATLVLLLAVLVLIIVFFDWNRIKPPLNAKVSEELHRPFAINGNLSVVWRREL 64

Query: 57  ------HILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P+P V  +D+ +   +         ++ + +R   L LL+  + +  + + 
Sbjct: 65  DEGGWRAWVPWPHVVAEDLTLGNPDWSKQPQMVTLKRVELRISPLALLAQRVAIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQR-----KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
           +P+      + G +NW  +      +       V +  I    G + + DQ       L 
Sbjct: 125 EPNAQLQRLADGRANWTFKFDPKDPNAEPSNWVVDIGAIGFDKGHVTLDDQTLKTNLNLL 184

Query: 164 DLNLQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAFKITAN--FPAK 213
              L     F +I+   +  + +             + TG +  ++ A +         +
Sbjct: 185 IDPLGKPIPFSDIVGDKAAKTAQDKGGAPQDYAFGLKVTGQYHGQKLAGQGKIGGLLALQ 244

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
           + +    +Q         ++L G L              +AG     L            
Sbjct: 245 DASKPFPLQAQAKIGDTSVELAGTLTDPLNLGALDLRLKLAGASLGNLYPLTGVTLPDTP 304

Query: 271 --RLSGNFKI-----SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENGA 322
                G+             R  ++  +    +   D      V+      L+    +  
Sbjct: 305 PYATDGHLIAKLHEPDGAQFRYEQFNGKIGSSDIHGDL---AYVASQPRPKLSGALLSNQ 361

Query: 323 ESMHDLNETDFFEEEEKKNK 342
               DL      +   K+  
Sbjct: 362 LLFADLAPLIGADSNAKQKA 381


>gi|262040581|ref|ZP_06013821.1| AsmA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259042073|gb|EEW43104.1| AsmA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 340

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 39/331 (11%), Positives = 95/331 (28%), Gaps = 33/331 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56
           R+ L+ +     +++V  F V    DW   +    ++ +  + +  A++G + +      
Sbjct: 5   RKTLVIITGTILLLIVLFFIVLATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQP 64

Query: 57  ------HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P+P V  +DI +             +  +      L LLS  + +  + ++
Sbjct: 65  DERGWRSWIPWPHVHAEDIVLGNPPAIPQVTMIHLPRVEATLAPLALLSKTVYLPWIKLE 124

Query: 109 QPHLNFYLSSKGVSNWFQR--------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           QP +     ++  +NW  +          +     +  L+ I    G I I D+ +    
Sbjct: 125 QPDVRLIRLAEDNNNWTFQLAGDKRTSGDSAPSSWSFRLDNILFDRGTIAIDDKITRSDI 184

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKN 214
            +    L     F  +       S              G +  +              ++
Sbjct: 185 TILVDPLGKPLPFSEVTGTKDRHSAAKPGDYVFGLSLKGRYKGQPVTGNGKIGGMLALRS 244

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270
            +    ++    +    +   G + +             AGD  + L             
Sbjct: 245 ASAPFPLEGDFHSGNTRVAFSGTVSYPLNVGGIDLRLKFAGDSLRDLYDLTGVLLPETPS 304

Query: 271 -RLSGNFKISDGNVRISRYKLQSILPNSSTD 300
               G  +            ++ +   S+  
Sbjct: 305 FSTDGRLRADFTQKTACALTIRILTAESAIA 335


>gi|311278940|ref|YP_003941171.1| AsmA family protein [Enterobacter cloacae SCF1]
 gi|308748135|gb|ADO47887.1| AsmA family protein [Enterobacter cloacae SCF1]
          Length = 617

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 47/388 (12%), Positives = 121/388 (31%), Gaps = 52/388 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  +FR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVIVAGLSALVLLVNPNEFRDGMVKQVASRSGYQLRLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK-- 119
            S+    + + +    +   + + + +    LPLLS +++V  + +    +     ++  
Sbjct: 61  LSILSGRMTLTEPGASAPLVRADNMRLDVALLPLLSHKLQVDKVMLKGAVVELTPQTEAV 120

Query: 120 -------GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                  G  +    +       +  + ++ V    +      +D++  + ++ LQ+   
Sbjct: 121 KDSAAPVGPKDSDLPRVNTGGGWSFDISRLQVADSVLVF-QHANDELVTVRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +                            F    N   ++ A+S    +    YP  +
Sbjct: 180 AQH-----------------------QATVEFSGRMNRDQRDWALSFTALVDGSRYPDNL 216

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
               +             +++ G       +   A        +K +   +  S+  L +
Sbjct: 217 SATFS----------KMNWTLQGAGLPAQGISGQA---SFEAAWKEAQKTLSFSQLALTA 263

Query: 293 ILPNSSTDEDNKTKVSQDE-ENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
               + +    +  V   + +     +        D N             +   +    
Sbjct: 264 ----NDSVLRGEGHVLLGDTQPQWTLNLQADRLDLD-NLLGQDAPAAAAAASPQGQTPPP 318

Query: 352 QYSVNKKEEKDNSHDKENQENFSGDKMI 379
           +       + D   D  N   FS D ++
Sbjct: 319 RQQSPVIADNDTRPDYSNLRGFSADLLL 346


>gi|313649895|gb|EFS14315.1| protein asmA [Shigella flexneri 2a str. 2457T]
 gi|332755903|gb|EGJ86257.1| protein asmA [Shigella flexneri K-671]
          Length = 604

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 48/378 (12%), Positives = 117/378 (30%), Gaps = 59/378 (15%)

Query: 15  VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74
           +++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P  S+    + +  +
Sbjct: 1   MLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQLSILSGRMSLTAQ 60

Query: 75  EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS---------NWF 125
                  + + + +    LPLLS ++ V  + +    +     ++ V          +  
Sbjct: 61  GASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAVRSEDAPVAPRDNT 120

Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
               + D   +  +  + V    +     E D+   + ++ LQ+     +  S       
Sbjct: 121 LPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQDPQHRGS------- 172

Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
                             F    N   ++  ISL   +    YP           +    
Sbjct: 173 ----------------FEFSGRVNRDQRDLTISLNGTVDASDYP----------HDLTAA 206

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
           I    + + G       ++    +      ++ S   +  ++  L +    + +    + 
Sbjct: 207 IEQINWQLQGADLPKQGIQ---GQGSFQSQWQESHKRLSFNQISLTA----NDSTLSGQA 259

Query: 306 KVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361
           +V+  E+          +   D    LNET   E    +             S    E  
Sbjct: 260 QVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLPRPVISSRIDEPA 319

Query: 362 DNSHDKENQENFSGDKMI 379
                 +  + F+ D ++
Sbjct: 320 Y-----QGLQGFTADILL 332


>gi|160871837|ref|ZP_02061969.1| AsmA family [Rickettsiella grylli]
 gi|159120636|gb|EDP45974.1| AsmA family [Rickettsiella grylli]
          Length = 559

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/419 (12%), Positives = 139/419 (33%), Gaps = 49/419 (11%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           + R VL+ +  +  + LV    + +F++  D +    +  T   G+++ + G I+  I P
Sbjct: 4   LFRIVLMLISAVILLGLVSLIGLVVFVNPNDLKPQISQAVTQFTGRQLHLDGNIQWSIFP 63

Query: 61  FPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
           +  +   D  +        +  ++I+ L ++   LPL   ++ +  + ++   L    ++
Sbjct: 64  WLGLQLNDASLANSPGFGRNPLAQIKKLDIQVRLLPLFHKQLEIGKLQLNGLALYLVKNA 123

Query: 119 KGVSNWFQR---------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
           +G  NW                            I+  + ++ G I   DQ+ ++ Y ++
Sbjct: 124 QGHVNWEGPWSSSSKTTPTHPDSHPLEHLKPLGFIVAGLGIRNGHIIYADQQKNKRYEIT 183

Query: 164 DLNLQISARFLNIISPLSI-------DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216
            L L+ +   +N  SP+ I        S+K +V    T  +    +  ++    P     
Sbjct: 184 HLQLKSTHLAVNKRSPVDIQFNLNTNASMKAAVKLRSTLLWRADDNQLELN---PFHLNT 240

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS--AKKSRLSG 274
                +      P  +     +  N++      + +         ++           +G
Sbjct: 241 FLQDARTPKKELPFSLKGNIFIDLNKQTLNADKLMAFINHTPLTGHILGQNFLNNPYFTG 300

Query: 275 NFK---ISDGNVRISRYKLQSILPNSSTDED------------NKTKVSQDEENLLNFSE 319
           +F    ++ G     + +L     ++                     ++ + +N      
Sbjct: 301 SFTSPHMNVGRFVFKKMQLGFQFKDNLLTLKPIQGQFYQGHYQGDATINFNSKNPF---I 357

Query: 320 NGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK--EEKDNSHDKENQENFSGD 376
                 + +N    F +    ++        + +++  +    +    +   Q  F+ D
Sbjct: 358 TAQSQFNQINTASLFRDLTNMSQIQLAGLASLNFTLTTQGNTAESFIKNLNGQGQFNID 416


>gi|51243946|ref|YP_063830.1| periplasmic protein (AsmA) [Desulfotalea psychrophila LSv54]
 gi|50874983|emb|CAG34823.1| related to periplasmic protein (AsmA) [Desulfotalea psychrophila
           LSv54]
          Length = 689

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/410 (12%), Positives = 117/410 (28%), Gaps = 47/410 (11%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L  +     ++++G   +   ID    +     Q     G+++ + G +   I P 
Sbjct: 1   MKKLLYLIFAALLLIIIGFGALFFLIDPNQLKPTIADQVKKATGRELVISGDMSWKIFPR 60

Query: 62  PSVFFKDIRIDQKEDG-SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
                 +  +           +     +    +PLLS  + + ++ +   H+     + G
Sbjct: 61  IGFSLGETTLQSPPGFAENFVQFSNAELDLALMPLLSHRLEIGNINLKNAHIFIQTLADG 120

Query: 121 VSNWF---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
            SN                   ++      ++IL+ I +      I + ++  +  +S L
Sbjct: 121 RSNMDGMITGKKEAEEKQSTSAETAEKAPWDIILQGISLTNASATIRNDKTGDLKTMSKL 180

Query: 166 NLQISARFLN----IISPLSIDSIKGSVIAEGT---------GNFDNKRSAFKITANFPA 212
           N  +          I   LS  S + +V + G          G    K+   + +A  P 
Sbjct: 181 NFSLDHFSPGEWSKISFSLSATSNEITVSSSGQTGIFIAADLGEVKLKKLHLETSATTPE 240

Query: 213 KNK------------AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL 260
                               +          +D         K         V G   + 
Sbjct: 241 IQIESVRIDLDQFTVGQDGNLTFSIKGKKRDLDFASKGSTKIKSDRAFNQLQVTGLQVET 300

Query: 261 LNLELSAKKSRLSGNFKIS-DGNVRISRYKLQSILPN-SSTDEDNKTKVSQDEENLLNFS 318
                +  K +L+   K   + NV  S   + S+  +        K          + F+
Sbjct: 301 NLKGDALPKKKLNLILKADSNYNVEQSLLTIPSLEADIEQMIIKGKASFKDGRVRQIRFN 360

Query: 319 ENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
            +      D          + K      +      +    +E D S  K+
Sbjct: 361 MSSESIDID----QLLGMNKAKPAAKPSQTGPEVKATISDQEPDLSALKQ 406


>gi|326623956|gb|EGE30301.1| protein AsmA [Salmonella enterica subsp. enterica serovar Dublin
           str. 3246]
          Length = 610

 Score =  135 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/326 (11%), Positives = 99/326 (30%), Gaps = 50/326 (15%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70
            L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P  S+    + 
Sbjct: 2   ILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQLSILSGRMT 61

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS-------- 122
           +  +       + + + +     PLLS ++ V  + +    +     ++ V         
Sbjct: 62  LTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAVRSDDAPVAP 121

Query: 123 -NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +        D   +  +  + V    +     E+D    + D+ L +     +  +   
Sbjct: 122 KDNTLPDVAEDRGWSFDIRSLRVADSVLVF-QHENDDQVTVRDIRLNMEQDAEHRGT--- 177

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                                 F    N   ++ A+S    +    YP           N
Sbjct: 178 --------------------FDFSGRVNRDQRDLALSFSGTVDASDYP----------HN 207

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
               I    + + G       +E    + +L   ++ +   +  +   L +    + +  
Sbjct: 208 LTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA----NDSSL 260

Query: 302 DNKTKVSQDEENLLNFSENGAESMHD 327
               +V+  E+         ++   D
Sbjct: 261 TGHVQVTLAEQPEWQIDLQSSKLNLD 286


>gi|197335826|ref|YP_002156573.1| AsmA [Vibrio fischeri MJ11]
 gi|197317316|gb|ACH66763.1| AsmA [Vibrio fischeri MJ11]
          Length = 711

 Score =  135 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 58/426 (13%), Positives = 122/426 (28%), Gaps = 68/426 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ + +   F  V+     + L ++  +F+     Q     G+++ + G I+    P 
Sbjct: 1   MKKIALLISIPFIAVIGAVLVLVLLVNPNEFKPLITEQVEAQTGRQLTIDGDIEWRFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                  + +   E          +   +     PL   E+ +  + +D      +    
Sbjct: 61  VGFSIGKMALSNPEGFVEPNLVSFDNAILDLNVRPLFQHEVSIGLITLDGASFTLHTLKN 120

Query: 120 GVSNWF------------------------------QRKSTMDMIHNVILEKIHVKGGRI 149
           GV+N                                   ST      V L+ I +    +
Sbjct: 121 GVTNLDGLVAKKETSTVENNNPTAPAEESDVNPEASSATSTEFNGWKVSLQGIALTNAEV 180

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNI----ISPLSIDSIKGSVIAEGTGNFD------- 198
            I D ++      SD+NL +S             L  D  K  V  +G    +       
Sbjct: 181 LIQDDKAGSKIHFSDMNLSLSQFIPGQWAELNFDLKGDLGKQKVALKGKTELNIAETLDD 240

Query: 199 ----------------NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW-- 240
                           NK +    T +  + +K  +L ++    A  + ++         
Sbjct: 241 ASFKNVEFNASYADAVNKFNDITFTIDQFSFDKWANLALKAKGKANNLEVNSNSTFALYV 300

Query: 241 --NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
                        S      K +  E        + +F ++   + I +  L ++  +  
Sbjct: 301 PKALDLIKIKEFTSTNNVKGKGIPNEDVTAVIGFNSSFDLNKSFLNIDKLALSAVDTD-- 358

Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358
                K  V  ++   + F         D       ++E  K  + +        SV K+
Sbjct: 359 --FTGKLTVQLNDIPKVRFDLRSPSIDVDALLATLPKDESSKTVDSNTSTKASSTSV-KE 415

Query: 359 EEKDNS 364
            E D S
Sbjct: 416 VEPDLS 421


>gi|75675202|ref|YP_317623.1| hypothetical protein Nwi_1009 [Nitrobacter winogradskyi Nb-255]
 gi|74420072|gb|ABA04271.1| Uncharacterized protein involved in outer membrane biogenesis
           [Nitrobacter winogradskyi Nb-255]
          Length = 656

 Score =  135 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/342 (16%), Positives = 110/342 (32%), Gaps = 26/342 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVP---LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58
           ++R+ I +  +  V ++G   +      +D    R+  E Q   + G      G I + +
Sbjct: 14  MKRLGISVAAILGVAVIGLTGLISMSRLLDHDALRDAVETQIRTVTGLDFVADGRIDVSV 73

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
            P   V F D+RI   +  +    +E L+      PLL    ++ D+ +  PH+    ++
Sbjct: 74  FPGSYVSFHDVRIKGGDADAPALSVEALTANLRLFPLLMQRFQIADVMLLHPHIRVRRAA 133

Query: 119 KGVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
            G SNW        R       + +   +I ++ G +   D +      L  ++L     
Sbjct: 134 DGRSNWTPFMETIARNMKPGADNPLSFSEIRIQNGELSYEDGDGRISENLHGIDL----- 188

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPII 231
                  L+  SI  S  A G  ++  +R    I+        +     +++   +  + 
Sbjct: 189 ------SLAWPSISRSFAATGQFDWRGERVDGSISLGDFLAALSGERSGLKIKVASPRLK 242

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
               G +       I  G  S      +     +       SG F       R S     
Sbjct: 243 FAFDGTVANPVSL-IMEGTLSADSTSLREALRWIGQPPPG-SGGFDRFSLKARASVIGSS 300

Query: 292 SILPNSSTDEDN---KTKVSQDEENLLNFSENGAESMHDLNE 330
             L N + + D    +  ++             A    D   
Sbjct: 301 VALTNVNIEIDGNVAEGVMTYANNGRQTLQATLAAGTLDFTP 342


>gi|46202092|ref|ZP_00053767.2| COG2982: Uncharacterized protein involved in outer membrane
           biogenesis [Magnetospirillum magnetotacticum MS-1]
          Length = 589

 Score =  135 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/414 (13%), Positives = 132/414 (31%), Gaps = 53/414 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L+ LG +  V++     +P  I     + +         G+ ++++G I + + P 
Sbjct: 3   MKKILMALGVVIVVIIGALAMIPAMIPAERIQGEIVAGVKSATGRDLSIQGKISVSVFPS 62

Query: 62  PSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            SV   ++ +            ++  + +R + LPLL G++ V    +  P +      +
Sbjct: 63  LSVQVGNVALANPAGYSSKDLIRLGAVDVRLKLLPLLGGKVEVDSFVLVDPIITLETDRQ 122

Query: 120 GVSNW---------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
           G  NW                          +   + ++ L  + +  G++  ID ++  
Sbjct: 123 GKGNWVFEGPAAAAPAPSVTTKPTDKPASAPSSAGVSDIRLGDVRITNGKLTQIDGKTGA 182

Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218
              +S++NL+           +++ S+   + A+G+  ++ K+    +            
Sbjct: 183 RQEVSEINLR-----------VALKSLSEPLSAKGSLVWNAKKVELDLDVGSLKALMDGQ 231

Query: 219 -LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE---------LSAK 268
              + L   + P+ + L GN       P   G   +     + L                
Sbjct: 232 SSTLGLVVASEPVKLGLKGNAK-GGASPGLDGALDLNVPSIRNLAAWAGSPITMAGNGLG 290

Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328
              ++G        +  +    Q+ +   +        V+                M DL
Sbjct: 291 PLSITGKLAAGPTQIAFT----QAAIAIDAIKAKGDVTVNTGAAKP-AIKGRLDVDMLDL 345

Query: 329 N---ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
           N     +  + +  + K         Q         D+  D    ++   D  +
Sbjct: 346 NPYLPPEGAQPKGGEGKATPAGGGAAQTQAKPAGWSDDPIDASGLKSADVDFAL 399


>gi|260772451|ref|ZP_05881367.1| AsmA protein [Vibrio metschnikovii CIP 69.14]
 gi|260611590|gb|EEX36793.1| AsmA protein [Vibrio metschnikovii CIP 69.14]
          Length = 699

 Score =  135 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/436 (10%), Positives = 127/436 (29%), Gaps = 68/436 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ + +  L  +V+     + +F++   F+     Q     G ++ ++G I     P 
Sbjct: 1   MKKLSLFIAALLVMVIAAVVALVVFVNPNQFKPLIIEQTRQQTGLELVIEGDISWQFFPA 60

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   +  +     K++ + +    +PL   ++ + ++ ++           
Sbjct: 61  IGFELGKTELRNPDGFTQNNLFKVDRVGIDIAVMPLFRHQLHIGNVRLEGAEFYLETLPN 120

Query: 120 GVSNWF-------------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQ 154
           G SN                             ++T D    + L  + V   R++++DQ
Sbjct: 121 GRSNLDSLTQAQNQKPSTQVEAVLTDSPSSQPEETTADQPWTLSLAGVTVSQARLEMLDQ 180

Query: 155 ESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKR--------- 201
           ++     L D++L +S     R+ ++       + +      G                 
Sbjct: 181 QTGTHSTLYDVDLTVSEFAADRWTSVDFSAKGSANQQQFSVHGKAEIKLSADFKQYALRN 240

Query: 202 --------------SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
                          A ++       ++  +L   +   A  +  D+ G         I 
Sbjct: 241 ITLNSTFEDPSVRIDALQLKLATFEFDQDNALTFAVKGNAADMTFDVSGQAQLQVDAAIS 300

Query: 248 SGVFS--VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
           +      +     +   L  S  +  ++        N  +    L  ++ N+      + 
Sbjct: 301 TVSLDKLLLNSTLQGAALPQSPLQVEMASRIVFDVTNSTLD-VALDRLMANA-IALSGQA 358

Query: 306 KVSQDEENLLNFSENGAESMHDL---------NETDFFEEEEKKNKNDDLKKDDIQYSVN 356
            +   +   + F  +      D          N           +   +++  D+    +
Sbjct: 359 NIHLADIPKIRFQLHSPAIDLDEFLGLDQVASNSAAQPSVNAPTSPPVEVE-PDLSALRD 417

Query: 357 KKEEKDNSHDKENQEN 372
                + + D+    N
Sbjct: 418 LDVVGEITIDRFKAGN 433


>gi|261343406|ref|ZP_05971051.1| protein AsmA [Providencia rustigianii DSM 4541]
 gi|282568548|gb|EFB74083.1| protein AsmA [Providencia rustigianii DSM 4541]
          Length = 620

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/392 (12%), Positives = 114/392 (29%), Gaps = 60/392 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R L  L  L  V++ G   + + ++  DFR     Q     G + A  G ++ H+ P 
Sbjct: 1   MKRFLTTLIILLVVLVAGLAALVMLVNPNDFRGYIVEQVEKKSGYQFAFNGDLRWHVWPT 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN-------- 113
            S+    I +            E + +  E  PL+S  + V  + ID   +         
Sbjct: 61  LSIITGPISVTAPNATQPVLSAENMRLDVELWPLISHRLSVEQVVIDGAVIRKTPESEAV 120

Query: 114 ----FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
                 ++  G     +          + + KI +    +     +    Y L ++NL +
Sbjct: 121 IQRKVPIAPGGSQVPAEPSDKNQ--WLLDISKIDITNSLVIWQTAKD--EYNLRNINLSL 176

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
                           + SV   G  N + +   F + ++      +  +          
Sbjct: 177 KKNNDK----------QVSVKFSGNLNKNQQELNFDLNSDVDLSKLSQQVS--------- 217

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
                           +    + + G       +        L          V ++   
Sbjct: 218 --------------GQVTQFDYQLKGVDLPENGITGKVTTDFLYTK--ADTSAVNLNNLI 261

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDD-L 346
           +Q+    + ++      V   +   +  + +      D  L +          N   + +
Sbjct: 262 VQA----NDSELKGNIHVGLTDIPDIVVNLSSTSLNLDSLLGQAPASGNSTTLNNASEDV 317

Query: 347 KKDDIQYSVNKKEEKDN--SHDKENQENFSGD 376
             ++ +  V       N   +D    ++F+ +
Sbjct: 318 VNNNERIGVKPVISGSNMDKYDLTGLKSFTAN 349


>gi|317152396|ref|YP_004120444.1| AsmA family protein [Desulfovibrio aespoeensis Aspo-2]
 gi|316942647|gb|ADU61698.1| AsmA family protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 691

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/404 (13%), Positives = 123/404 (30%), Gaps = 53/404 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  LI  G L ++ +  A  +   +D  +++ +  +      G+++  +G I     P+
Sbjct: 5   LKIGLIVFGSLVALFVAAAIILVATVDPNEYKAEIAQAVKENTGRELVFEGDIGFSFFPW 64

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    + +  +   S     +I       + +PL SG++ +  + +D    N  +  +
Sbjct: 65  LGLEVGPVALGNRPGFSPDAMIRINRAEASVQIMPLFSGKVAIGVIALDGFTANLAVDKQ 124

Query: 120 GVSNW-----------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQES 156
           GV+NW                            +   + ++ +  I +    +   D  +
Sbjct: 125 GVNNWDDLTAAGKNADKNGGATAAPEAQPAADGSGQSVKDLSVLGIEITNASLVYDDAMA 184

Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216
            +   L++L+L +         P  +     +          N R     TA +      
Sbjct: 185 GKKTALANLDLVVGEVGDKRPFPFEL-----AFDLVMDAPKINTRPRLAGTATYDIDAAT 239

Query: 217 ISLK-IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS----- 270
           + +  + L  L   I    F           YSG   +A    + L  +L  +       
Sbjct: 240 LDISGLTLDALGMEITGLFFAKAK---DGVSYSGEIDLARTSPRELMKQLGMESPVTADP 296

Query: 271 ----RLSGNFKISD--GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
                L    K +    +  +   +L+      +     +       +  + F+ N  + 
Sbjct: 297 AVLEALDAAIKFNGTADSASLESLRLKLDDTTVTGTGTVRNFA----KPAIEFAINVDDI 352

Query: 325 MHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
             D         +  + K           S     E D S  ++
Sbjct: 353 DADRYMPPASGGQGSEAKA----GPAAAGSAEPATEPDLSALRD 392


>gi|270264563|ref|ZP_06192829.1| AsmA family protein [Serratia odorifera 4Rx13]
 gi|270041699|gb|EFA14797.1| AsmA family protein [Serratia odorifera 4Rx13]
          Length = 677

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/413 (11%), Positives = 119/413 (28%), Gaps = 42/413 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           +    +G +  +V+       +  DW   +     + +  + +  A++G + +       
Sbjct: 6   KAFSWVGGIVLLVIAAQVIFVMTFDWNRLKPTINDKVSAELQRPFAIRGELGVDWAREKD 65

Query: 57  -----HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P +  +DI +   +   G    +++ +      L LL  E+ +  +++ Q
Sbjct: 66  EGGWRAWVPWPHIHAEDIVLGNPKNIPGDSMVQLQRVDASIAPLALLGKEVLIPRIWLKQ 125

Query: 110 PHLNFYLSSKGVSNWFQ----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
           P+      + G +NW               +V +  +    G+I + D      +     
Sbjct: 126 PNATLQRLANGDNNWTFNLAGDPKQPTSDWSVNIHDVVFDRGQIDVKDATLKADFRALID 185

Query: 166 NLQISARFLNIISPLSIDSIKGS---VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLK 220
            L     F  +       S          +  G ++ +  +           +N  +   
Sbjct: 186 PLGKPLPFSEVTGKKDAGSAITPDYVFGWKVKGKYNGEPLSGSGKMGGMLSLQNAEVPFP 245

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR--------- 271
           +Q    +    + + G L              ++GD    L                   
Sbjct: 246 LQADVRSGAARVVVAGTLSDPMNLGGLDLRVKLSGDSLGNLYGLTGVLLPNTPPYSTDGH 305

Query: 272 LSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-DLN 329
           L        G V +  ++  +    +   +      V+      L+      +    DL 
Sbjct: 306 LIARLHEKGGAVFQYQKFDGKIGDSDIHGNLK---YVASKPRPKLSGEVLSKQLRLADLA 362

Query: 330 E---TDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                D   E+  + +      D +        +  N  D +    F+  ++ 
Sbjct: 363 PLIGADSNTEKAGRGEKSRQPADKVLPVEKFDTKSWNLMDADV--KFTAQRIE 413


>gi|261856438|ref|YP_003263721.1| AsmA family protein [Halothiobacillus neapolitanus c2]
 gi|261836907|gb|ACX96674.1| AsmA family protein [Halothiobacillus neapolitanus c2]
          Length = 797

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 120/342 (35%), Gaps = 24/342 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R+++ +  L  V+++ A       D  D+++          G+ I + G IK+ + P+
Sbjct: 4   IKRIVMWVVALILVLVIAAVAFVATFDPNDYKDKISSLVQEKTGRSIELGGPIKLTLFPW 63

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V  +D+ +      S       + + ++A FLPLL G+  V  + +D   ++   +S 
Sbjct: 64  LGVSVRDVALGNAPGFSPKDMVTAKTVEVKAAFLPLLKGQFEVGKLVLDGATIHLARNSD 123

Query: 120 GVSNWFQ----------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
           GV+NW                    +      ++ +  + +    +   D  + Q   L 
Sbjct: 124 GVTNWADLLARPSASESGASPGSAPAATRNATSLAIGGVAINDATLDWQDAVTGQSLALQ 183

Query: 164 DLNLQISARFLNIISPLSID---SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            LNL   A  L     +S++   + + S + + TG+     +    T       K++   
Sbjct: 184 HLNLDSGAIRLGQAVDMSLNFSYATQDSKLGKLTGDVRLSSTFDMKTNGEQFSAKSMKFH 243

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-RLSGNFKIS 279
             + P        L      +   P  +            ++  +  +K   ++     +
Sbjct: 244 ASVVPDPQHNPNALPAKTELDLSVPEVTVDLPKHSVNLSAMDATVDMEKGFGMTHAALTA 303

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321
            G +     K   +  +       K +        L+FS +G
Sbjct: 304 KGALSADWQKG--LYSSDKLSLAGKMQGMPTHTGELDFSAHG 343


>gi|254293702|ref|YP_003059725.1| AsmA family protein [Hirschia baltica ATCC 49814]
 gi|254042233|gb|ACT59028.1| AsmA family protein [Hirschia baltica ATCC 49814]
          Length = 795

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 62/396 (15%), Positives = 127/396 (32%), Gaps = 23/396 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R ++ +  +F+V++ G      FI  + +++  E  A   +G+ + + G IK+ + P 
Sbjct: 1   MIRFILIILAIFAVLIGGLVAAVHFIPSSAYKDKIETVAESALGRDVTINGDIKLRLFPK 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            +       I   +    S  + +  L    + LPLLS ++ + +  +  P L+      
Sbjct: 61  ITASAGQTVIANPKGFGDSDFASMTELRAAVKILPLLSQKVEIDEFILVDPKLSLVKLEN 120

Query: 120 GVSNWFQRKSTMDMIH------------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
           G +NW    ++ D                  L  + +  G +   D+++ Q + L+ LN+
Sbjct: 121 GENNWTFSSTSTDSPAPEDETPTNPDAVQARLGDVRLVNGDLSYDDRQAGQTHTLTKLNI 180

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
            I    +N    +  D I   +  E   + +N +   +  +     +    L    F   
Sbjct: 181 LIKLPEINGPLGVDGDGILDELPFELNADVENLQKLLEGVSTPVNADLKTDLATTGFNGN 240

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
             +   +  +L  N + P                       K+ +        G + +S 
Sbjct: 241 IVLGDVIGLDLTANAEVPDLQAFADFMKIEIPGAKA---LGKANVKAKVDGQVGALILSD 297

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL- 346
             L+        D      V +      +   N           D    E    ++  L 
Sbjct: 298 VILKHSSDLLKIDFTGGANVGEKIAFKGDLDFNAPNLRALAQTADVVLPEGDIYRSFSLD 357

Query: 347 -----KKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
                  D +  S    +  D         N SG K
Sbjct: 358 GQTQGSLDSVSLSNATLKFDDIVGTGNMLLNLSGAK 393


>gi|300314078|ref|YP_003778170.1| uncharacterized protein involved in outer membrane biogenesis
           protein [Herbaspirillum seropedicae SmR1]
 gi|300076863|gb|ADJ66262.1| uncharacterized protein involved in outer membrane biogenesis
           protein [Herbaspirillum seropedicae SmR1]
          Length = 682

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/401 (13%), Positives = 120/401 (29%), Gaps = 46/401 (11%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++++ L     +++  A    L  DW   +     + +  +G++ A+ G + +       
Sbjct: 6   KIILWLCASLILLITAAVIFILSFDWNRAKPWINERVSASIGREFAIDGDLSLHWQRAQT 65

Query: 57  -----------HILPFPSVFFKDIRIDQKEDGS---FESKIEGLSMRAEFLPLLSGEIRV 102
                        LP+P +  + +RI      S     + I  ++     LPLL  +I +
Sbjct: 66  LPGAAPPGFWERWLPWPRLQAEQLRIGNPPAFSQAGQMATIGQVTFTLNPLPLLVHDIAL 125

Query: 103 FDMYIDQPHLNFYLSSKGVSNWFQRKSTM-DMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
             + I  P ++   +++ V+NW  + S+      N+ L +I ++ G++ + D        
Sbjct: 126 PSLDIRDPSVSLLRNAQAVNNWTFKSSSAGPSAWNLRLGRITLRQGKLSLDDA------- 178

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221
           +  + L+     L+   P             G+ N        K       +N      +
Sbjct: 179 VDKIKLKAEIDTLD---PAVEKIYGLGWKLSGSFNGAPVSGQGKAGGVLSLQNVQQPYPL 235

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RL 272
           Q         I + G L             SV+G     L                  RL
Sbjct: 236 QAQVRVGKTAIGVHGTLTRPAALAALDLRLSVSGASMGNLYPLTGVLLPETPPFATEGRL 295

Query: 273 SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMHDLNET 331
            G             ++ +    +     +   + +          + +    +   ++ 
Sbjct: 296 IGKIDAGHSQWDYEDFRGKVGQSD----INGSLRYTTGAGAARSQLTGSLTSEVLRFDDL 351

Query: 332 DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQEN 372
                 +   +  +    + Q        K  S D     +
Sbjct: 352 APLIGADSNAEKAERGAQERQPGDKVLPVKTFSTDAWGALD 392


>gi|293603493|ref|ZP_06685916.1| AsmA family protein [Achromobacter piechaudii ATCC 43553]
 gi|292818104|gb|EFF77162.1| AsmA family protein [Achromobacter piechaudii ATCC 43553]
          Length = 694

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/366 (11%), Positives = 97/366 (26%), Gaps = 41/366 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++ IG+    +++++         DW   +     +A+  +G+  A+ G + +      
Sbjct: 8   RKIAIGIVGALALLVLVLVVFIATFDWNRAKPMINERASAAIGRPFAINGDLSVKWQREP 67

Query: 58  -------ILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   LP+P     DI +           + ++        LPLL   + +  + + 
Sbjct: 68  AEGGWRAWLPWPHFIANDISVGNAPWAKAPTFATLKRGEFSLAPLPLLRQRVVIRRIQLT 127

Query: 109 QPHLNFYLSSKGVSNWFQ--RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
           +P  +    + G +NW     +S       + + +I    GR+  +D+       +    
Sbjct: 128 EPAADLQRLADGRANWEFTLPESGEPSPWVLDINEIGFDKGRVAYVDEMLQADLTVLVDP 187

Query: 167 LQISARFLNIISPLSIDSIKGS-------VIAEGTGNFDNKRSAFKITAN--FPAKNKAI 217
           L     F ++           S             G +    +  +         ++   
Sbjct: 188 LGKPVPFADVAGAAFAPQDGQSPAPRDYVFGWSVEGKYKGLPTKGEGKVGGMLALQDPKQ 247

Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RL 272
              +Q           + G +              +AG     L                
Sbjct: 248 PFPVQADVAVGGTKASVAGTVTDPAHLGALDLRLKLAGSSMAQLYPLTGVTLPDTPPYST 307

Query: 273 SGNFKISDGN-----VRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES-M 325
            G+      N          +  +    +           +       L    +  +  M
Sbjct: 308 DGHLVAKLQNPGGAVFDYKDFNGKVGNSD----LHGDISFALGAPRPKLTGKLSSKQLRM 363

Query: 326 HDLNET 331
            DL   
Sbjct: 364 VDLGPL 369


>gi|309787864|ref|ZP_07682474.1| protein asmA [Shigella dysenteriae 1617]
 gi|308924263|gb|EFP69760.1| protein asmA [Shigella dysenteriae 1617]
          Length = 604

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/378 (12%), Positives = 116/378 (30%), Gaps = 59/378 (15%)

Query: 15  VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74
           +++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P  S+    + +  +
Sbjct: 1   MLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQLSILSGRMSLTAQ 60

Query: 75  EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS---------NWF 125
                  + + + +    LPLLS ++ V  + +    +     ++ V          +  
Sbjct: 61  GASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAVRSEDAPVAPRDNT 120

Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
               + D   +  +  + V    +     E D+   + ++ LQ+     +  S       
Sbjct: 121 LPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQDPQHRGS------- 172

Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
                             F    N   ++  ISL   +    YP           +    
Sbjct: 173 ----------------FEFSGWVNRDQRDLTISLNGTVDASDYP----------HDLTAA 206

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
           I    + + G       ++    +      ++     +  ++  L +    + +    + 
Sbjct: 207 IEQINWQLQGADLPKQGIQ---GQGSFQAQWQELHKRLSFNQISLTA----NDSTLSGQA 259

Query: 306 KVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361
           +V+  E+          +   D    LNET   E    +             S    E  
Sbjct: 260 QVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLPRPVISSRIDEPA 319

Query: 362 DNSHDKENQENFSGDKMI 379
                 +  + F+ D ++
Sbjct: 320 Y-----QGLQGFTADILL 332


>gi|92116803|ref|YP_576532.1| AsmA [Nitrobacter hamburgensis X14]
 gi|91799697|gb|ABE62072.1| AsmA [Nitrobacter hamburgensis X14]
          Length = 643

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 61/342 (17%), Positives = 117/342 (34%), Gaps = 26/342 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVP---LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58
           ++R+ I +  +  V L+G   +      +D    R+  E Q + + G      G I + +
Sbjct: 1   MKRLGISVAAILGVALIGLTGLISMSRLLDRDALRQAVETQISAVTGLDFVADGRIDVSV 60

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
            P   V F D+RI   + G+    ++ L+     LPLL    ++ D+ + +PH+    ++
Sbjct: 61  FPGSYVSFHDVRIKGSDAGAPALSVDVLTANLRLLPLLMQRFQIADIMLLRPHIRVTRAA 120

Query: 119 KGVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
            G SNW        R         V   +I V+ G +   D  ++    L D++L     
Sbjct: 121 DGQSNWIPFVETIARTMKPGADSPVSFSEIRVQDGELSYEDTANEVSEKLGDIDL----- 175

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPII 231
                  L+  SI  S  A G  ++  +R    I+ +      +     +++   + P+ 
Sbjct: 176 ------SLAWPSISRSFAATGQFDWRGERIDGSISLSDFLAALSGERSGLKVKVASAPLK 229

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
               G +       +  G  +      +     +       SG F       R S     
Sbjct: 230 FAFDGTVANPVSL-MMEGTLTADSTSLREALRWIGQPPPG-SGGFGRFALKARASMIGAS 287

Query: 292 SILPNSSTDEDN---KTKVSQDEENLLNFSENGAESMHDLNE 330
             L N + + D    +  ++             A    D   
Sbjct: 288 IALTNVNIEIDGNVAEGVMTYANNGRQTLQATLAAGALDFTP 329


>gi|238749954|ref|ZP_04611458.1| hypothetical protein yrohd0001_37230 [Yersinia rohdei ATCC 43380]
 gi|238711883|gb|EEQ04097.1| hypothetical protein yrohd0001_37230 [Yersinia rohdei ATCC 43380]
          Length = 597

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 40/368 (10%), Positives = 102/368 (27%), Gaps = 55/368 (14%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81
            + L ++  DFR    +Q     G  + ++G ++ H+ P  S+      +      +   
Sbjct: 3   ALVLLVNPNDFRGYMVKQVEKKSGYHLQLEGDLRWHVWPQLSIIAGRTALTAPGAATPVL 62

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-------KSTMDMI 134
             E + +  +  PLLS ++ +  + +    +     S+                      
Sbjct: 63  SAENMRLDVKLWPLLSHQLDIKQVMLKGAVIRLTPESESQQRADAPVAPSGNTPVDEHRA 122

Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
             + + K+ V    +     ++DQ   + D+NL++                         
Sbjct: 123 WKLDINKVQVVDSLLVWQRTDNDQ-VNVRDINLELKQDDQR------------------- 162

Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254
                         N   ++ + S+        YP                I    + V 
Sbjct: 163 ----QVHITVASRINRNQRDISFSMVADADMRHYPRQFS----------ASISQFTYKVE 208

Query: 255 GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314
           G    +  +     +  L  +++     + +++    +    +        K +  +   
Sbjct: 209 GADIPVGGVS---GEGTLQASYQDDIKQLLLNQLSFTA----NDNQLTGSAKATLGDIPD 261

Query: 315 LNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV---NKKEEKDNSHDKENQE 371
            + +        D      F  E K   N          +      + + D   D ++  
Sbjct: 262 YDINLAADNLNLD----TIFGWEPKSTANSKDNVKQPAVTAPVIAIQADDDVGQDLQSLR 317

Query: 372 NFSGDKMI 379
           +F+    +
Sbjct: 318 DFTAQLAL 325


>gi|146305819|ref|YP_001186284.1| AsmA family protein [Pseudomonas mendocina ymp]
 gi|145574020|gb|ABP83552.1| AsmA family protein [Pseudomonas mendocina ymp]
          Length = 680

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 42/336 (12%), Positives = 96/336 (28%), Gaps = 40/336 (11%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   R     Q +  + +  A++G +++              LP+P    + +R+  
Sbjct: 28  LFDWNRARPLINEQVSTALQRPFAIEGDLRVVWKPEAGERGLSGWLPWPHFSAEQVRLGN 87

Query: 74  KED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------ 125
            E   G     ++    R   LPLL   + +  + +    ++    + G +NW       
Sbjct: 88  PEWAQGDTFVSLDSARFRLAPLPLLWKTVSIPSIELGTALVDLQRLADGRANWSFDLGKD 147

Query: 126 --QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS---ARFLNIISPL 180
                        + +  I    G +++ D+ S          L      A  +   +  
Sbjct: 148 DEAEPRDEPAAWTLDIGTIAFARGHVQLDDRSSKTRLEAVVEPLGEPIPFADIVGKGAAD 207

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNL 238
              +   +      G+F  +               + ++   +Q         I + G+L
Sbjct: 208 RAAAQDYAFAWRTKGDFRGQPITGDGKVGGLLALHDASLPFPLQADLRIGATRIRVAGSL 267

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRY 288
              +          ++G+    L                  RL  +   +DG + R   +
Sbjct: 268 TDPQNLGALDLRLQLSGNSLSQLYPLTGVTLPDTPAYSTDGRLQADLSDADGAIFRYLDF 327

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
             +    +   D      V++     L+      + 
Sbjct: 328 NGRIGASDIHGDLT---FVARQPRPKLSGQLTSNQL 360


>gi|197117289|ref|YP_002137716.1| hypothetical protein Gbem_0899 [Geobacter bemidjiensis Bem]
 gi|197086649|gb|ACH37920.1| conserved hypothetical protein [Geobacter bemidjiensis Bem]
          Length = 1061

 Score =  133 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 51/369 (13%), Positives = 118/369 (31%), Gaps = 31/369 (8%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK-GGIKIHILPFP 62
            +L  L  + +V+++ A  +P  +D   ++++   Q    + + +  + G   + +   P
Sbjct: 9   WLLPALATILTVIVLAAALLPRLLDLDTYKQEILAQVKSSLKRDLQYQTGEFSLRL--TP 66

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +  F  + + +K+  S     + L++R   LPLL  ++ V  + +++P +      +G  
Sbjct: 67  AFTFTGVTVKEKDGSSDFITADRLTVRIAILPLLRKKLVVSRLQLERPAMRIVRDRQGTF 126

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIID---QESDQVYFLSDLNLQISARFLNIISP 179
           N     +         +  + +K G I+  D    E   V  LS+ +L +S         
Sbjct: 127 NIADLLTPSAGGEAPGIRGLELKKGHIRFTDFAFSEKPVVTELSNADLFLSRLVRGKSCD 186

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
             + +  GS       +           A  P     ++ K+   PL        +    
Sbjct: 187 FKLAAALGSPKGPVPVSLSGSAKI--PEAGTPFSGMEVNGKVATGPLDAG---HFWPYYS 241

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
                   +G  ++                    G             +++  +  +   
Sbjct: 242 KWVPFKSLAGELALDAS---------------FKGRLNAFKSKA---EFRITRLNLDYPQ 283

Query: 300 DEDNKTK-VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358
               +           L  + N  +  H   + D F+      +  D+   D++ + N  
Sbjct: 284 VFHARLTPRLLKGSCALTLTANQLDIEHVKVDLDGFKVNGGV-RLSDIHSGDLRITANAS 342

Query: 359 EEKDNSHDK 367
               N  D 
Sbjct: 343 SNSFNLRDF 351



 Score = 38.7 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/235 (10%), Positives = 68/235 (28%), Gaps = 12/235 (5%)

Query: 140 EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP-LSIDSIKGSVIAEGTGNFD 198
              ++        D  +  V   + L+  ++          L+      ++ A     +D
Sbjct: 513 GDANLTATTYAFRDIVAKPVSRPNALSFAMNFDKEQFRITALNYQLAPAALSATAVSRYD 572

Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY-SGVFSVAGDF 257
               +F I +N     +   +           ++ L  +    + + ++ SG  +++   
Sbjct: 573 G-PVSFDIRSNRFQSGEVGYMVPMARDYRPAGLVQLQLHAAGPDMERLFWSGNAALSNVS 631

Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317
            K  +         ++GN +I+  +   ++  L+            K  V+  +      
Sbjct: 632 VKAGDKVRPVS--GVNGNVRINGESFESTQLSLRVGGS----SISGKGTVTGLDHPSFLI 685

Query: 318 SENGAES---MHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369
           S +          L         E+       + D++Q +        +    + 
Sbjct: 686 SFSSPSLYLSDLGLVPAKNPVRVERVQGTLAYQNDNLQIAALSGTLGKSPLSLKG 740


>gi|283835905|ref|ZP_06355646.1| AsmA family protein [Citrobacter youngae ATCC 29220]
 gi|291068076|gb|EFE06185.1| AsmA family protein [Citrobacter youngae ATCC 29220]
          Length = 686

 Score =  133 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 41/405 (10%), Positives = 109/405 (26%), Gaps = 45/405 (11%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +  +F +++V    V    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITASVTGIFLLLIVVFIIVIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + + +
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPDVTMVHLPRVEATLAPLALLTKTVWLPWIKLVK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ +     
Sbjct: 126 PDARLIRLSEKNNNWTFTLAGDENRDPNAPPSAWSFRLDNILFDQGRIAINDKATRSELE 185

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVI-----AEGTGNFDNKRSAFKITAN--FPAKN 214
           +  ++        + ++     +    V       +  G ++ +  +           + 
Sbjct: 186 IL-VDPLGKPLPFSEVTGAKNKASNARVEDYVFGLQAKGRYNGEPLSGSGKIGGMLALRG 244

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270
           +     +Q    +    +   G +               +GD    L             
Sbjct: 245 EGTPFPVQADFRSGNTRVAFTGTVNDPMNMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPP 304

Query: 271 -----RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAE 323
                RL         +V     +  +    +           +       L       +
Sbjct: 305 FETDGRLVAKIDPEKSSVFDYRDFNGRIGDSD----IHGTLTYTTGKPRPKLEGDVESRQ 360

Query: 324 SMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
                       +  K  +     +        +  +K   +D+ 
Sbjct: 361 LRLADLGPLIGVDSGKGAEKAKQSEQRKGEKSVQPADKVLPYDRF 405


>gi|299131900|ref|ZP_07025095.1| AsmA family protein [Afipia sp. 1NLS2]
 gi|298592037|gb|EFI52237.1| AsmA family protein [Afipia sp. 1NLS2]
          Length = 978

 Score =  133 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 59/327 (18%), Positives = 124/327 (37%), Gaps = 26/327 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++  L+GL     + L+ A   PLF++W  ++  FE +AT +VG  + V+G +   +LP 
Sbjct: 1   MQTTLLGLAIAAIMALIAALAAPLFVNWNKYKPQFEAEATRVVGAPVRVEGALDARLLPA 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P +    + +   +D   + + + L +      LL GE R   + +D   L+  L  +G 
Sbjct: 61  PILRLHKLSVGAPKD-PTKLRADKLDVEFSLGSLLRGEWRATQLSLDGLALDIGLDRQGR 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                          + ++K  +  GR+ + D+ S     L  L+               
Sbjct: 120 --IIAPSKGEFNFGALAIDKFDLS-GRVALHDEASGSDVDLEGLD-----------FSGD 165

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-PLAYPIIIDLFGNLFW 240
           + S+ G++  EG       R  F++  +   + +A  L++ L    A  +   L G L +
Sbjct: 166 VRSLGGNLRGEGHVLLHGVRQPFRLALSKAGEGEATRLRLDLDSAQAGAMSSSLDGALTF 225

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300
           +++ P + G  ++A                R+S +  +       ++ ++      +   
Sbjct: 226 DKRIPHFDGAMTLAAA---------GETPWRISAHTALDPSGAAFTQGEILYGAEATGVK 276

Query: 301 EDNKTKVSQDEENLLNFSENGAESMHD 327
                 +S      L    +  +   D
Sbjct: 277 LSGHGALSFRPA-KLEMKLSATQLDLD 302


>gi|300955086|ref|ZP_07167491.1| AsmA family protein [Escherichia coli MS 175-1]
 gi|300317997|gb|EFJ67781.1| AsmA family protein [Escherichia coli MS 175-1]
          Length = 617

 Score =  133 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 123/391 (31%), Gaps = 59/391 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMLLLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 S---------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             +  S                         F    N   ++  ISL   +    YP   
Sbjct: 180 PQHRGS-----------------------FEFSGRVNRDQRDLTISLNGTVDASDYP--- 213

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                   +    I    + + G       ++    +      ++ S   +  ++  L +
Sbjct: 214 -------HDLTAAIEQVNWQLQGADLPKQGIQ---GQGSFQAQWQESHKRLSFNQISLTA 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD----LNETDFFEEEEKKNKNDDLKK 348
               + +    + +V+  E+          +   D    LNET   E    +        
Sbjct: 264 ----NDSTLSGQAQVTLTEQPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQTTL 319

Query: 349 DDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                S    E        +  + F+ D ++
Sbjct: 320 PRPVISSRIDEPAY-----QGLQGFTADILL 345


>gi|323966042|gb|EGB61482.1| AsmA family protein [Escherichia coli M863]
          Length = 687

 Score =  133 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 53/409 (12%), Positives = 116/409 (28%), Gaps = 41/409 (10%)

Query: 1   MLRRVLIGLGFL---FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI- 56
           M+ +       +   F +++V A  +    DW   +    ++ +  + +  A++G + + 
Sbjct: 1   MMSKAGKITAAISGTFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVV 60

Query: 57  -----------HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVF 103
                        +P+P V  +DI +    D        +  +      L LL+  + + 
Sbjct: 61  WERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLP 120

Query: 104 DMYIDQPHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQE 155
            + +++P       S+  +NW    +  D           +  L+ I    GRI I D+ 
Sbjct: 121 WIKLEKPDARLIRLSEKNNNWTFNLANDDNKDMNAKPSAWSFRLDNILFDQGRIAIDDKV 180

Query: 156 SDQVYFL----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN-- 209
           S     +        L  S    +                +  G ++ +    K      
Sbjct: 181 SKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGM 240

Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK 269
              + +     +Q    +    +   G +    K          +GD    L        
Sbjct: 241 LALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLL 300

Query: 270 SR-----LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA 322
                    G    KI      +  Y+  +     S    +    +      L       
Sbjct: 301 PDTPPFETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESR 360

Query: 323 ESMH-DLNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           +    DL      +  +   K+K  + KK +       K    +  + +
Sbjct: 361 QLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSIQPAGKVLPYDRFETD 409


>gi|269138545|ref|YP_003295245.1| AsmA family protein [Edwardsiella tarda EIB202]
 gi|267984205|gb|ACY84034.1| AsmA family protein [Edwardsiella tarda EIB202]
 gi|304558561|gb|ADM41225.1| AsmA [Edwardsiella tarda FL6-60]
          Length = 594

 Score =  133 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 48/373 (12%), Positives = 107/373 (28%), Gaps = 51/373 (13%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70
            L  VV  G   + L I+  DFR    +Q     G  + + G ++  + P  S+    + 
Sbjct: 2   ILLVVVTAGISALLLLINPNDFRAYMIKQVQQRTGYVLTLDGDLRWRVWPQLSILSDRMS 61

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--- 127
           +            + + +     PLLS ++ V  + +    +     S+           
Sbjct: 62  LRADGAAQPVIAADNMRLDVRLWPLLSHQLEVRRVMLKGAVIRLTPDSEPTPLPNAPRSP 121

Query: 128 ----KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
               +   DM   + + ++ V+   + I      +   L D+ L I        S     
Sbjct: 122 AVRSEPISDMAWRLNIHQVKVED-SLVIWQAPDGEPINLRDIELNIQQDATRHAS----- 175

Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243
                               F    N   ++  +SL+  +    YP             +
Sbjct: 176 ------------------VDFSSRINRDQRDLQLSLQADVDLSRYPQQY----------R 207

Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
             +    +  +G       +   A +  ++ ++  +   V +S   L +    + +    
Sbjct: 208 ARVDHLEYRYSGAGLPSAGI---AGQGSMTLSYSAAPAAVTLSDLTLSA----NDSQLRG 260

Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDN 363
           + + +         +        D      ++ +     N D         V  +     
Sbjct: 261 EIQGTLAAIPEYRVTLQADNLNWD--GLSGWQAQSADTANADAGNTPPPPPVVSQVAAPE 318

Query: 364 SHDKEN-QENFSG 375
           S D+     +FS 
Sbjct: 319 SSDEMAFLRDFSA 331


>gi|148258039|ref|YP_001242624.1| putative asmA protein, assembly of outer membrane proteins
           [Bradyrhizobium sp. BTAi1]
 gi|146410212|gb|ABQ38718.1| putative asmA protein, assembly of outer membrane proteins
           [Bradyrhizobium sp. BTAi1]
          Length = 645

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 51/340 (15%), Positives = 112/340 (32%), Gaps = 31/340 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+   +  L  V  +G F     ++    R   E Q   + G ++ VKG I + + P 
Sbjct: 1   MRRLGTPIAVLLGVAFIGLFVSSWLVNRDALRRAVETQIRAVTGLELVVKGHIDVSLFPG 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             V F D+ +          +++ L+   + LPLL     + D+ + +P +N    + G 
Sbjct: 61  SYVSFHDVGLKGGGTADPALRVDVLTANLQLLPLLLQRFEIADLMLLRPQINVIREANGS 120

Query: 122 SNWFQR------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
           SNW                  +   +I ++ G +   D  +     L D++L        
Sbjct: 121 SNWTPFIATIAHTMRPGPDSQMSFSEIRIQDGVLVFDDNGTRSQERLDDIDL-------- 172

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPIIIDL 234
               L+  SI  S  A G  ++  +R    I+ +      +     +++   + P+ +  
Sbjct: 173 ---SLAWPSISRSFAATGQFDWRGQRIEGSISVSDFLAALSGDRSGLKMRLASPPLKVAF 229

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNL--------ELSAKKSRLSGNFKISDGNVRIS 286
            G +  N    +  G  +V     +                 +  L     +   ++ ++
Sbjct: 230 DGTVA-NRTSALMEGTLTVDSPSLREALRWTGQTPLGSGGFGRFALRARANVVGASIALT 288

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
              ++          +     + +    L  +        
Sbjct: 289 NVNVEL----DGNTAEGVMTYANNGRQALQATLAADALDF 324


>gi|300718958|ref|YP_003743761.1| hypothetical protein [Erwinia billingiae Eb661]
 gi|299064794|emb|CAX61914.1| Conserved uncharacterized protein, AsmA family [Erwinia billingiae
           Eb661]
          Length = 688

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 53/415 (12%), Positives = 118/415 (28%), Gaps = 46/415 (11%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           +++  +  +F ++++    +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KIISWIVGIFLLLVIVVVIIIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVAWERNRD 65

Query: 57  -----HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V   DI +             ++ +      L LL  E+ +  + + Q
Sbjct: 66  EPGWRSWVPWPHVHADDILLGNPPEIPDVTMVHLQRVDATLAPLALLGKEVYIPWIKLTQ 125

Query: 110 PHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P      ++   +NW            +         L+ I    G+I   D  +     
Sbjct: 126 PDARLIQTADKKNNWTFNLAGSDNPDPNQPPSAWTFRLDNIMFDRGQIAYRDAINKADVQ 185

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           ++   L     ++ +       S KG+       + +G ++N++             ++K
Sbjct: 186 VTVDPLGKPVPYVQVAGSKDDKSQKGASDYVFGWKASGTYNNEKLTGDGKIGGMLSLRSK 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS----- 270
                +Q         + + G L               AGD    L              
Sbjct: 246 TNPFPLQADVRNGTTRVQVAGTLQDPLNLGGLDIRLRFAGDTLANLYGLTGILLPDTPPY 305

Query: 271 ----RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES 324
                L   F+   G V R   +       +           +Q      L  S    + 
Sbjct: 306 ETDGHLIARFQQKGGPVFRYENFNGHIGDSD----IHGSMTYTQGKPRPKLEGSLESKQL 361

Query: 325 -MHDLNETDFFEEEEKKNKN--DDLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376
            M DL         +   K      K+ D       +    +  D ++      D
Sbjct: 362 RMADLGPLIGVNSGKGSEKTEQAKAKRGDATTQPADRVLPHDKFDTKSWGAMDAD 416


>gi|317494471|ref|ZP_07952884.1| AsmA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917401|gb|EFV38747.1| AsmA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 683

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 62/427 (14%), Positives = 129/427 (30%), Gaps = 60/427 (14%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56
           ++ L  L  + ++V+VG     +  DW   +    ++ +  + +  A++G + +      
Sbjct: 5   KKTLSWLAGIVALVIVGIVIFVITFDWNRLKPTINQKVSTELNRPFAIRGNLGVDWSRPA 64

Query: 57  ------HILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P+P V  +DI +    D        +E +      L LL  +I +  + + 
Sbjct: 65  DETGWRSWVPWPHVHAEDIVLGNPADIPAVSMVSLERVDASLSPLALLGKQIYIPRIKLK 124

Query: 109 QPHLNFYLSSKGVSNWFQ---------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159
           QP  +    + G +NW           +        +  ++ I    G+I   D      
Sbjct: 125 QPDASLRRLANGKNNWTFELANASNEGQPKDQKSAWSFKIDDIVFDQGKIAYDDAMIGAK 184

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGS---------VIAEGTGNFDNKRSAFKITANF 210
           +  +   L     F  ++   S      S            +GT N ++   + KI    
Sbjct: 185 FKATIDPLGKPLPFSEVVGDSSSAKKVASKKAPDYVFGWKVDGTYNDESLSGSGKIGGML 244

Query: 211 PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270
             ++      +Q    +    + + G L               +G     L+        
Sbjct: 245 ALRDPDGLFPLQADVRSGKTRVAVAGTLSDPLNLGALDLRLQFSGQSLSQLHKLTGIVLP 304

Query: 271 ---------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDE--------- 311
                     LS   K + G + R   +  +    +              +         
Sbjct: 305 DTPPYSTDGHLSAELKRAKGAIYRYQNFNGKIGDSD----IHGSLTYQMSKPRPSLSGEL 360

Query: 312 -ENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL----KKDDIQYSVNKKEEKDNSHD 366
             N L F++       D N+      E+    +D +    K D  Q+S      K  +  
Sbjct: 361 VSNQLRFADLAPLIGADSNQEKASRGEKATQPSDKVLPRDKFDTKQWSTMDANVKFTAKR 420

Query: 367 KENQENF 373
            E+ E+ 
Sbjct: 421 IEHGESL 427


>gi|70734114|ref|YP_257754.1| AsmA family protein [Pseudomonas fluorescens Pf-5]
 gi|68348413|gb|AAY96019.1| AsmA family superfamily [Pseudomonas fluorescens Pf-5]
          Length = 691

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 39/357 (10%), Positives = 100/357 (28%), Gaps = 43/357 (12%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
           F DW   +     + +  + +  A+ G + +              +P+P V  +D+ +  
Sbjct: 28  FFDWNRIKPTLNAKVSEELHRPFAINGDLSVVWQREPDEGGWRAWVPWPHVVAEDLTLGN 87

Query: 74  KED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR---- 127
            +         ++ + +R   L LL+  + +  + + +P       + G +NW  +    
Sbjct: 88  PDWSKAPQMVSLKRVELRISPLALLAQRVSIPRIDLTEPDAALQRLADGRANWTFKFDPK 147

Query: 128 -KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS--------DLNLQISARFLNIIS 178
             +       V +  I    G + + DQ       L           +  +       ++
Sbjct: 148 DPNAEPSNWTVDIGAIGFDKGHVTLDDQSLKTQLDLQVELLGKPIPFSDIVGESEAKKVA 207

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236
               ++   +   +  G +  ++ A           ++      +Q         ++L G
Sbjct: 208 EKGAEAQAYAFALKVKGQYHGQKLAGTGKIGGLLALQDSRKPFPLQAQAQIGDTKVELRG 267

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNF-KISDGNVRIS 286
           +L              +AG     L                   L+      +       
Sbjct: 268 SLTDPLNLGALDLRLKLAGTSLGNLYPLTGVTLPDSPPYSTDGHLTAKLHDPAGATFSYQ 327

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE-NGAESMHDLNETDFFEEEEKKNK 342
            +  +    +   +      V+      L+ +  +    M DL      +   K+  
Sbjct: 328 DFNGKIGDSDIHGNLT---YVASQPRPKLSGALVSNQLLMSDLAPLIGADSNAKQKA 381


>gi|323975074|gb|EGB70183.1| AsmA family protein [Escherichia coli TW10509]
          Length = 687

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 53/409 (12%), Positives = 116/409 (28%), Gaps = 41/409 (10%)

Query: 1   MLRRVLIGLGFL---FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI- 56
           M+ +       +   F +++V A  +    DW   +    ++ +  + +  A++G + + 
Sbjct: 1   MMSKAGKITAAISGTFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVV 60

Query: 57  -----------HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVF 103
                        +P+P V  +DI +    D        +  +      L LL+  + + 
Sbjct: 61  WERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLP 120

Query: 104 DMYIDQPHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQE 155
            + +++P       S+  +NW    +  D           +  L+ I    GRI I D+ 
Sbjct: 121 WIKLEKPDARLIRLSEKNNNWTFNLANDDNKDMNAKPSAWSFRLDNILFDQGRIAIDDKV 180

Query: 156 SDQVYFL----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN-- 209
           S     +        L  S    +                +  G ++ +    K      
Sbjct: 181 SKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGM 240

Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK 269
              + +     +Q    +    +   G +    K          +GD    L        
Sbjct: 241 LALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLL 300

Query: 270 SR-----LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA 322
                    G    KI      +  Y+  +     S    +    +      L       
Sbjct: 301 PDTPPFETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESR 360

Query: 323 ESMH-DLNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           +    DL      +  +   K+K  + KK +       K    +  + +
Sbjct: 361 QLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 409


>gi|152986005|ref|YP_001350922.1| hypothetical protein PSPA7_5601 [Pseudomonas aeruginosa PA7]
 gi|150961163|gb|ABR83188.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 689

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/419 (12%), Positives = 112/419 (26%), Gaps = 46/419 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56
           R++L        ++L          DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKILTWTLASLLLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREE 64

Query: 57  ------HILPFPSVFFKDIRIDQKED------GSFESKIEGLSMRAEFLPLLSGEIRVFD 104
                   +P+P    +DI +   +        S  + +E +  R   LPLL   IR+  
Sbjct: 65  GEEGWRAWVPWPRFSAEDITLGNPDWTAGKTRASEFASLERIEFRLAPLPLLWQTIRIPQ 124

Query: 105 MYIDQPHLNFYLSSKGVSNW----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           + + QP  +    + G +NW        S       + + +I    G + + DQ      
Sbjct: 125 IKLTQPRADLLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRL 184

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAK 213
            +    L     F  +           +        +  G +  +  +           +
Sbjct: 185 EVLVDPLGKPVPFGQLAGKALARGDAANAQDYVFGWKVKGTYKGQALSGAGKVGGMLALQ 244

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
           + +    +Q    A      + G L              ++G     L            
Sbjct: 245 DASKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTP 304

Query: 271 ------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGA 322
                  L    K   G + R   +  +    +           V++     L+      
Sbjct: 305 AYSTDGHLLARLKEEGGALFRYENFNGKVGASD----LHGSLTFVARQPRPKLSGKLTSE 360

Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS--HDKENQENFSGDKMI 379
           +            +   + +            V   EE       D +    F+G +++
Sbjct: 361 QLRFADLGPLIGADSNAEKQKRGQTARQPGDRVLPVEEFRTERWRDMDADVEFTGKRIV 419


>gi|134094666|ref|YP_001099741.1| hypothetical protein HEAR1443 [Herminiimonas arsenicoxydans]
 gi|133738569|emb|CAL61614.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 645

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 61/411 (14%), Positives = 132/411 (32%), Gaps = 49/411 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           + +L G G L   +++ A  +    D    +     QA   + +++ +   I + + P+P
Sbjct: 6   KIMLWGAGGLALALVIAASILYTQTDSAHLKIIARDQARQALARELMLD-EIDLSLFPYP 64

Query: 63  SVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            +  K+I +       G    ++   + +   LPLLSG I +  ++++    N  +++ G
Sbjct: 65  QLHAKNITLSNPAWAQGQHFLEVSSATAQLALLPLLSGRIILSGLHLEGLQANLEIAADG 124

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISP 179
             NW         + ++ L  + V    I+  D + +   + +  L+         +   
Sbjct: 125 KRNWEFPDVDAASLSDMTLTSMSVLHSNIRFRDGKKESAQWQVLSLHADGGHGLQRVKFG 184

Query: 180 LSIDSIKGSVIAEGTGNFDNK--------RSAFKITANFPA--KNKAISLKIQLFPLAYP 229
           + +      +  +G  +  ++              T+       +  I L + L      
Sbjct: 185 MKVVRDNHLLQLDGKLDDLSQLGKPGAVSPGIVHATSGQAKITVSGKIPLDLALQNYDIA 244

Query: 230 III------DLFGNLFWNEKQPI-YSGVFSVAGDFSKL--LNLELSAKKSRLSGNFKISD 280
             I      D+FG        P+   G   +     K    ++ L   K  LSG+ +  D
Sbjct: 245 ASIEAESMQDMFGFFGIQRPSPVPLKGEMKLHAANKKTEIADVRLHMGKLNLSGDGRWDD 304

Query: 281 -------------GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
                          + + +  L    P+    +  +    Q     L     G +   +
Sbjct: 305 SGSKPVFHARLQADKIDMVQTFLDIGQPSLPPKKTGQLFRDQALAWPLLLDLEGTQGTAE 364

Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378
           +N                LK        +       + D+   E FSG  +
Sbjct: 365 VN-------------IAALKIRSGIEVADATARMSFNDDRMKVEAFSGKLL 402


>gi|238919216|ref|YP_002932731.1| assembly protein [Edwardsiella ictaluri 93-146]
 gi|238868785|gb|ACR68496.1| protein AsmA [Edwardsiella ictaluri 93-146]
          Length = 595

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 42/324 (12%), Positives = 95/324 (29%), Gaps = 48/324 (14%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70
            L  VV  G   + L I+  DFR    +Q     G ++ + G ++  + P  S+    + 
Sbjct: 2   ILLVVVAAGISALLLLINPNDFRAYMIKQVQQRTGYRLTLDGDLRWRVWPQLSILSDRMS 61

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--- 127
           +            + + +     PLLS ++ V  + +    +    +S+           
Sbjct: 62  LRADGAEQPVIAADNMRLDVRLWPLLSHQLEVRRVMLKGAVIRLTPASEPTPLPNAPRSS 121

Query: 128 ----KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
               +   DM   + + ++ V+   + I      +   L D+ L I        S     
Sbjct: 122 AVRSEPISDMAWRLNIHQVKVED-SLVIWQAPDGEPINLRDIELNIQQDATRHAS----- 175

Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243
                               F    N   ++  +SL+  +    YP       +      
Sbjct: 176 ------------------VDFSSRINRDQRDLQLSLQADVDLSRYPQQYRARID------ 211

Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
                  +  +G       +   A +  ++  +  +   V +S   L +    + +    
Sbjct: 212 ----HLEYRYSGAGLPSAGI---AGQGSMTLGYSAASAAVTLSDLTLSA----NDSQLRG 260

Query: 304 KTKVSQDEENLLNFSENGAESMHD 327
           + + + D       +        D
Sbjct: 261 EIQATLDAIPEYRVTLQADNLDWD 284


>gi|293396965|ref|ZP_06641239.1| AsmA suppressor of OmpF assembly mutants [Serratia odorifera DSM
           4582]
 gi|291420436|gb|EFE93691.1| AsmA suppressor of OmpF assembly mutants [Serratia odorifera DSM
           4582]
          Length = 612

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 93/317 (29%), Gaps = 48/317 (15%)

Query: 18  VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG 77
            G   + L ++  DFR    ++     G ++ ++G ++ H+ P  S+    + +      
Sbjct: 17  AGMSALVLLVNPNDFRSYMVKKVEQRSGYQLTLEGDLRWHVWPQLSILAGRMTLTAPGAK 76

Query: 78  SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-------KST 130
           +     E + +  + LPLLS ++ V  + +    +     S+  S              +
Sbjct: 77  APVVSAENMRLDVKLLPLLSHQLFVKQVMLKNAVIRLTPDSEQQSRTDAPIAPGGSSVES 136

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
           +D      ++ + V    + I  + +++   + DLNL +                     
Sbjct: 137 VDTPWKFDIDNLRVAD-SLLIWQRANNEQINVRDLNLTMQRSGDR--------------- 180

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250
                             N   ++   +L   L    +P       N             
Sbjct: 181 --------QAEMELSSRVNRDQRDLTFNLSADLDLQQFPRQFSTTVN----------QFN 222

Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD 310
           + + G       ++    +  +   ++     + ++   L      + +    +  +S  
Sbjct: 223 YQLEGVDIPTGGIK---GQGSVRAVYQQDPRQLTLNDLMLGV----NDSQLKGRADISLG 275

Query: 311 EENLLNFSENGAESMHD 327
           +        +      D
Sbjct: 276 DVPNYVVELSSPHLDMD 292


>gi|152971056|ref|YP_001336165.1| putative assembly protein [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|150955905|gb|ABR77935.1| suppressor of ompF assembly mutants [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 607

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/326 (11%), Positives = 100/326 (30%), Gaps = 50/326 (15%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70
            L +V++ G  ++ L ++  DFR     +     G ++ + G ++ H+ P  S+    + 
Sbjct: 2   ILLAVIVAGLTSLVLLVNPNDFRAYMVHEVAERSGYQLDLDGPLRWHVWPQLSILSGRMT 61

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV--------- 121
           +  +       + + + +    LPLLS +++V  + +    +     ++ V         
Sbjct: 62  LTARGAEEPVIRADNMRLDVALLPLLSHQLQVKQVMLKGAVIQLTPKTEAVRDSSAPVVP 121

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +     +  D   +  + ++ V    +     E+ +   + D+ LQ+     +  +   
Sbjct: 122 HDNTLPLAPEDRGWSYDVRQLQVAD-SVLFFQHENGEQVTVRDIRLQMEQDENHRAT--- 177

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                                 F    N   ++ A++    +    YP  +         
Sbjct: 178 --------------------VDFSGRVNRDQRDLALNFSATVQGGDYPHSLKADFT---- 213

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
                    + + G        +    +  L  +++  D  +R     L      + +  
Sbjct: 214 ------QLSWQLRGAELP---PDGINGQGSLQASWQEDDKTLRFDNLNL----MANRSTV 260

Query: 302 DNKTKVSQDEENLLNFSENGAESMHD 327
                V   +    +   +      D
Sbjct: 261 TGSGSVVLGDRPDWSLDLHATTLDLD 286


>gi|115526074|ref|YP_782985.1| hypothetical protein RPE_4079 [Rhodopseudomonas palustris BisA53]
 gi|115520021|gb|ABJ08005.1| AsmA family protein [Rhodopseudomonas palustris BisA53]
          Length = 645

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/341 (15%), Positives = 112/341 (32%), Gaps = 32/341 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R+ + +  L  + +VG   +P  +D    R   ERQ   + G  + V G +++ + P 
Sbjct: 5   IKRLGMSIAALLCLAVVGVMALPGVLDRDSLRAAVERQIRAVTGLDLVVNGDVEVSVFPG 64

Query: 62  PSVFFKDIRI-DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             V F DI +  Q            L+   + +PLL     + D+ + QP ++ + ++ G
Sbjct: 65  SYVAFHDIGLRAQASPDVPMLTAPLLTTNLQLIPLLLRRFEIADVVLSQPRIHVFRAADG 124

Query: 121 VSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
            SNW        R        +V   ++ ++ G +   D+ S     +  ++L       
Sbjct: 125 GSNWTPFIEALTRTMKPGAADHVSFSEVRLEDGELNYQDEASQLSGSIGKIDL------- 177

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPIIID 233
                L+  +I  +  A G   +  +R    I+        +     ++      P+ I 
Sbjct: 178 ----SLAWPAISRTFAATGQFEWRGERIDGSISVTDFLAALSGDRSGLRARIAGPPLKIA 233

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRI 285
             G +  N    +  G  S      +     +  +           L     +   ++ +
Sbjct: 234 FDGTV-VNRTNLMLEGTLSADSVSLRNALRWVGQEPPGTGGLGPFALKARANLVGPSLAL 292

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
           +   +Q          +     S      L  +        
Sbjct: 293 TNVNIQI----DKNVAEGVITYSNGGRQSLQATLAAGALDL 329


>gi|107103978|ref|ZP_01367896.1| hypothetical protein PaerPA_01005051 [Pseudomonas aeruginosa PACS2]
          Length = 689

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/419 (12%), Positives = 112/419 (26%), Gaps = 46/419 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56
           R++L        ++L          DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREE 64

Query: 57  ------HILPFPSVFFKDIRIDQKED------GSFESKIEGLSMRAEFLPLLSGEIRVFD 104
                   +P+P    +DI +   E        S  + +E +  R   LPLL   IR+  
Sbjct: 65  GEEGWRAWIPWPRFSAEDITLGNPEWMAGKTKASEFASLERIEFRLAPLPLLWQTIRIPQ 124

Query: 105 MYIDQPHLNFYLSSKGVSNW----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           + + QP  +    + G +NW        S       + + +I    G + + DQ      
Sbjct: 125 IKLTQPRADLLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRL 184

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAK 213
            +    L     F  +           +        +  G +  +  A           +
Sbjct: 185 EVLVDPLGKPVPFGQLAGKALATGDAANAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQ 244

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
           + +    +Q    A      + G L              ++G     L            
Sbjct: 245 DGSKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTP 304

Query: 271 ------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGA 322
                  L    K   G + R   +  +    +           V++     L+      
Sbjct: 305 AYSTDGHLLARLKEEGGALFRYENFNGKVGASD----LHGSLTFVARQPRPKLSGKLTSE 360

Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS--HDKENQENFSGDKMI 379
           +            +   + +            V   EE       D +    F+G +++
Sbjct: 361 QLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIV 419


>gi|288958573|ref|YP_003448914.1| protein [Azospirillum sp. B510]
 gi|288910881|dbj|BAI72370.1| protein [Azospirillum sp. B510]
          Length = 1090

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 106/324 (32%), Gaps = 32/324 (9%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFES 81
           P  IDW  ++     + +   G+++ ++G +   +LP P++  +D R+            
Sbjct: 23  PSLIDWNAYKGAIAERVSQATGRRVELRGDLGFTLLPSPALTLRDARLANAAGADEPDMV 82

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV---- 137
           +++ L  R    PLL G I+V  + + +P     +   G  NW    +       +    
Sbjct: 83  RLKKLDARVALGPLLGGRIQVESIALVEPTFVVEVLKDGRINWDLSSAGPRKGDGLGAAE 142

Query: 138 ------ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA 191
                   +++ +  G +   D  + +   +  L+ +I+A            S+ G    
Sbjct: 143 GLVSAVSFDQVLIDNGTVIYRDDRNGRTETVEGLSARIAA-----------GSLTGPFQW 191

Query: 192 EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
           +G           + TA    +  A+ ++  L        +   G L     +       
Sbjct: 192 QGDFRLRGLSLHGEATAGRFTEGAAVPVRATLSLPQTDATLRFAGILAGGTFKVQGDLRA 251

Query: 252 SVAGDFSKLLNLELSAKKS-------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
              GDF++L+    SA+          L    +        +  + Q     ++ +   +
Sbjct: 252 E-GGDFARLVETHGSARVPAALAQPFSLRSTVEAGTSLATFTSLEAQLGDTRATGNASLR 310

Query: 305 T-KVSQDEENLLNFSENGAESMHD 327
               ++ E      +        D
Sbjct: 311 AGDPTKGEVPRTELTLAINRLDLD 334


>gi|329850776|ref|ZP_08265621.1| asmA family protein [Asticcacaulis biprosthecum C19]
 gi|328841091|gb|EGF90662.1| asmA family protein [Asticcacaulis biprosthecum C19]
          Length = 700

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/378 (12%), Positives = 111/378 (29%), Gaps = 33/378 (8%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-P 62
            +   +    ++VL+         +W   R      A+  + + +++ G +++H+  F P
Sbjct: 57  WLTRIILGTIALVLLAIIVFLANPNWNWARGIVSSIASDRLNRAVSIDGNLRVHLFSFTP 116

Query: 63  SVFFKDIRIDQKEDG------SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           S     ++I + +           + ++ L+++ E +PL  G + +  + + +P++  Y 
Sbjct: 117 SATVGGLKIAEPDWAIRAGQKQSLADVQSLTVQTELMPLFIGRLVLPRLEVTKPNVFLYQ 176

Query: 117 SSKGVSNWFQRKSTMDMIHN--VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
              G +NW                ++   ++ G+I     +    +              
Sbjct: 177 DKAGQANWDFSDGKKKGEATKLPPIKNFIIREGQIAFNSVQRGITFN------------G 224

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK-AISLKIQLFPLAYPIIID 233
            + +     S + +    G GN + K    +         +      +QL   A    + 
Sbjct: 225 TVNAQEKAGSGRQAFQLTGDGNLNGKVFELEAAGGPLLNIRTDRPYPLQLKARAGNTYLT 284

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRY 288
             G +          G   V G+    L              R+S      +    I+  
Sbjct: 285 AKGQVTRPFNLGQLVGDVEVKGNNLADLYYLTGLTLPNTPAYRMSAKVTRDERLYHINGI 344

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
             +    +     +   KV   ++     + + A    D  +            N     
Sbjct: 345 NGRVGGSD----LNGALKVELQKDGRPYLTGDLASRSLDFQDLGA--VFGATAANTPQGA 398

Query: 349 DDIQYSVNKKEEKDNSHD 366
           D           +    D
Sbjct: 399 DVSATPAGASTSRRLLPD 416


>gi|323934694|gb|EGB31084.1| AsmA family protein [Escherichia coli E1520]
          Length = 686

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 114/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI    + +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKLSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|330990977|ref|ZP_08314931.1| hypothetical protein SXCC_00885 [Gluconacetobacter sp. SXCC-1]
 gi|329761798|gb|EGG78288.1| hypothetical protein SXCC_00885 [Gluconacetobacter sp. SXCC-1]
          Length = 716

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/360 (11%), Positives = 110/360 (30%), Gaps = 30/360 (8%)

Query: 12  LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71
           +  V+ V    + +F  W  F    ER+A   +G+++ +   + + I     +    ++I
Sbjct: 26  VLGVLAVAVMALVIFWSWDWFIPMVERRAGAALGRRVTLA-HLHVRIGRVIRITADGVKI 84

Query: 72  DQKEDG---SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR- 127
           D+ +        +  + L +      LL G + +  + +D+P +       G +N+    
Sbjct: 85  DEPDGFTTLPPFATADHLMVGLNLWHLLGGTVDLPVIALDRPVVELNGKRDGTANYRFPA 144

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187
                      + ++ +  G++ ++          SD+  Q+                  
Sbjct: 145 SGGGGSTAMPRIGELDIDAGQMHLVHAGLR-----SDMRAQVHTTPGQGDVQPR------ 193

Query: 188 SVIAEGTGNFDNKRSA--FKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
            ++A+  G +  +     F   A     ++     + +     P  + L G +       
Sbjct: 194 -IVADVRGTYAGQAMTGHFSGGALVSLADRTRPYPVDVDVRHGPTRLTLVGTVDDPLSFA 252

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYKLQSILPNSSTD 300
                 ++AG    LL         +     ++G+    D  VR   ++      +    
Sbjct: 253 GARLRLTLAGPDMSLLYPLTGVVIPQTPAYHVAGSLDYHDRRVRFRDFEGVVGSSD---- 308

Query: 301 EDNKTKVSQDEENLLNFSENGAESMHDLNET-DFFEEEEKKNKNDDLKKDDIQYSVNKKE 359
                     +        +      DL +   FF     ++ +   +  + +       
Sbjct: 309 LGGTLSADPHQTVTF-VDTDLHSRHVDLADLGGFFGATPGEHPSTTQQAAEEKAHAASGA 367


>gi|82779558|ref|YP_405907.1| hypothetical protein SDY_4544 [Shigella dysenteriae Sd197]
 gi|81243706|gb|ABB64416.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
          Length = 691

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKSANAKPSAWSFRLDNILFDQGRIAIDDEVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|59712358|ref|YP_205134.1| assembly protein [Vibrio fischeri ES114]
 gi|59480459|gb|AAW86246.1| predicted assembly protein [Vibrio fischeri ES114]
          Length = 711

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/402 (12%), Positives = 117/402 (29%), Gaps = 67/402 (16%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ + +   F  V+     + L ++  +F+     Q     G+++ + G I+    P 
Sbjct: 1   MKKIALLISIPFIAVIGAVLVLVLLVNPNEFKPLITEQVEAQTGRQLTIDGDIEWRFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                  + +   E          +   +     PL   E+ +  + +D      +    
Sbjct: 61  IGFSIGKMALSNPEGFVEPNLVSFDNAILDLNVRPLFQQEVSIGLITLDGASFTLHTLKN 120

Query: 120 GVSNWF------------------------------QRKSTMDMIHNVILEKIHVKGGRI 149
           GV+N                                   ST      V L+ I +    +
Sbjct: 121 GVTNLDGLVAKKETSTVENNNPTAPAEETDVNPEASSATSTEFNGWKVSLQGIALTNAEV 180

Query: 150 KIIDQESDQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNFD------- 198
            I D ++      SD+NL     I  ++  +   L  D  K  V  +G    +       
Sbjct: 181 LIQDDKAGSKIHFSDMNLSLSQFIPGQWAKLNFDLKGDLGKQKVALKGKTELNIAETLDD 240

Query: 199 ----------------NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW-- 240
                           NK +    T +  + +K  +L +++   A  + ++         
Sbjct: 241 ASFKNVEFNASYADAVNKFNDITFTIDQFSFDKWANLVLKVKGKANNLEVNSNSTFALYV 300

Query: 241 --NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
                        S      K +  E        + +F ++   ++I +  L ++  +  
Sbjct: 301 PKALDLIKIKEFTSTNNVKGKGIPNEDVTAVIGFNSSFALNKSFLKIDKLALSAVDTD-- 358

Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKK 340
                K  V  ++   + F         D       ++E  K
Sbjct: 359 --FTGKLSVQLNDIPKVRFDLRSPSIDVDALLATLPKDESSK 398


>gi|270261063|ref|ZP_06189336.1| putative assembly protein [Serratia odorifera 4Rx13]
 gi|270044547|gb|EFA17638.1| putative assembly protein [Serratia odorifera 4Rx13]
          Length = 610

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/386 (11%), Positives = 117/386 (30%), Gaps = 52/386 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+L  L  L  V++ G   + L ++  DFR     +     G  + + G ++ HI P 
Sbjct: 1   MRRLLTTLVILLVVLVAGMSALVLLVNPNDFRAYMVTKVEQKSGYHLTLDGELRWHIWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF--YLSSK 119
            S+    + +      +     + + +  + LPLLS ++ V  + +    +        +
Sbjct: 61  LSILAGRMTLTAPGAKAPVVSADNMRLDVKLLPLLSHQLFVKQVMLKNAVIRLTPESEEQ 120

Query: 120 GVSNWFQRKSTM-----DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
              N     +       D      ++ + +    + I  + +++   + D+NL +     
Sbjct: 121 NQPNAPIAPAGDTEETLDTPWKFDIDNLRIVD-SLLIWQRANNEQINVRDINLVLQQNAN 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                     +       N   ++   S+   +    YP  I  
Sbjct: 180 RH-----------------------AQMELSSRVNRDQRDLTFSMAADIDLQQYPRRI-- 214

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                      +    + + G       ++           ++ +   + +S+     IL
Sbjct: 215 --------AATVTQFNYQLEGADILGGGIKGDGSA---QVAYQQTPQQITLSQL----IL 259

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY- 353
             + +       V   E  +   +        D      ++      +   +    +   
Sbjct: 260 SANDSQFSGSGSVRFGEVPVYAMNLTSTALNLD--ALSGWQSSSGTQQAVSVTAAPVIAN 317

Query: 354 -SVNKKEEKDNSHDKENQENFSGDKM 378
            + + ++  +   D   Q N + D++
Sbjct: 318 QAEDPQQNLEVLRDFTAQLNLNVDQL 343


>gi|218702289|ref|YP_002409918.1| putative outer membrane biogenesis protein [Escherichia coli IAI39]
 gi|218372275|emb|CAR20138.1| putative outer membrane biogenesis protein [Escherichia coli IAI39]
          Length = 691

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/388 (12%), Positives = 111/388 (28%), Gaps = 36/388 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LLS  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLSKTVWLPWVKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLASDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +  +             +  G ++ +    K         + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGNADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSV 355
           L      +  +   K+   ++   + SV
Sbjct: 371 LGPLIGVDSGKGAEKSTRSEQKKGEKSV 398


>gi|281180562|dbj|BAI56892.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 691

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLSFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|331675016|ref|ZP_08375773.1| AsmA family protein [Escherichia coli TA280]
 gi|331067925|gb|EGI39323.1| AsmA family protein [Escherichia coli TA280]
          Length = 691

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/404 (12%), Positives = 119/404 (29%), Gaps = 40/404 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P +  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHIHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLASDDNKDTNAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKN 214
           +  ++    A   + ++     + K          +  G ++ +    K         + 
Sbjct: 191 IF-VDPLGKALPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGMLALRG 249

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR--- 271
           +     +Q    +    +   G +    K          +GD    L             
Sbjct: 250 EGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPP 309

Query: 272 --LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH- 326
               G    KI      +  Y+  +     S    +    +      L       +    
Sbjct: 310 FETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLA 369

Query: 327 DLNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           DL      +  +   K+K  + KK +       K    +  + +
Sbjct: 370 DLGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|309787514|ref|ZP_07682126.1| asmA family protein [Shigella dysenteriae 1617]
 gi|308925092|gb|EFP70587.1| asmA family protein [Shigella dysenteriae 1617]
          Length = 686

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKSANAKPSAWSFRLDNILFDQGRIAIDDEVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|327251168|gb|EGE62861.1| asmA family protein [Escherichia coli STEC_7v]
          Length = 686

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/403 (12%), Positives = 115/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGTFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW    +  D           +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDMNAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +    K         + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSIQPAGKVLPYDRFETD 408


>gi|224588318|gb|ACN58942.1| uncharacterized protein involved in outer membrane biogenesis
           [uncultured bacterium BLR7]
          Length = 647

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/358 (13%), Positives = 121/358 (33%), Gaps = 46/358 (12%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           ++  G+     VV  G  +VP  +    ++   E  A+  +G+K+ ++G + + + P   
Sbjct: 2   KLKTGIWIGVGVVAAGLISVPFLLPLDTYKPTIENAASAALGRKVQIRGPLHLAVYPQLG 61

Query: 64  VFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           +   D+ +             I  + + AE +PL+SGE+RV ++ + +P ++  ++  G 
Sbjct: 62  ISLSDVTVANLPGARDGEMIAIGSVLVGAELVPLISGELRVTEIVLQKPVIHLEVAKDGT 121

Query: 122 SNWFQRKSTMDMIHN----------------VILEKIHVKGGRIKIIDQESDQVYFLSDL 165
            NW     T+                          +++  G +   D  +++      +
Sbjct: 122 PNWRLGPQTVANASPSARPANATAAAPAAGGFRFRSVNIDDGELTYFDAATNKTESFHAI 181

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI-SLKIQLF 224
            +++  +     +PL      G++   G+  ++N+        +            + + 
Sbjct: 182 GIRMYLQPGPANAPL-----NGALTINGSVTYNNEPLKIDTKVDRFGPMLNGQPTPLHVG 236

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNF 276
             +  I  D  G L     +   +G   +     +                    + G F
Sbjct: 237 ITSNIINADFSGTLS---GEGAIAGALKMGAHSVRSFAAWSGHPMPPGNGFGLMAMEGQF 293

Query: 277 KISDG--NVRISRYKLQSILPNSSTD---------EDNKTKVSQDEENLLNFSENGAE 323
             +DG   +R +     S+  ++                 ++ + + N       GA+
Sbjct: 294 SANDGVYQIRKTHMAFDSMSMSTDIAINTKGPVPEITGLVQIDRLDVNPYLAPGKGAD 351


>gi|330909579|gb|EGH38093.1| uncharacterized protein YhjG [Escherichia coli AA86]
          Length = 686

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANGDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLSFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|296391716|ref|ZP_06881191.1| hypothetical protein PaerPAb_26344 [Pseudomonas aeruginosa PAb1]
          Length = 689

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/419 (12%), Positives = 112/419 (26%), Gaps = 46/419 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56
           R++L        ++L          DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREE 64

Query: 57  ------HILPFPSVFFKDIRIDQKED------GSFESKIEGLSMRAEFLPLLSGEIRVFD 104
                   +P+P    +DI +   E        S  + +E +  R   LPLL   IR+  
Sbjct: 65  GEEGWRAWIPWPRFSAEDITLGNPEWTAGKTKASEFASLERIEFRLAPLPLLWQTIRIPQ 124

Query: 105 MYIDQPHLNFYLSSKGVSNW----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           + + QP  +    + G +NW        S       + + +I    G + + DQ      
Sbjct: 125 IKLTQPRADLLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRL 184

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAK 213
            +    L     F  +           +        +  G +  +  A           +
Sbjct: 185 EVLVDPLGKPVPFGQLAGKALATGDAANAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQ 244

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
           + +    +Q    A      + G L              ++G     L            
Sbjct: 245 DASKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTP 304

Query: 271 ------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGA 322
                  L    K   G + R   +  +    +           V++     L+      
Sbjct: 305 AYSTDGHLLARLKEEGGALFRYENFNGKVGASD----LHGSLTFVARQPRPKLSGKLTSE 360

Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS--HDKENQENFSGDKMI 379
           +            +   + +            V   EE       D +    F+G +++
Sbjct: 361 QLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIV 419


>gi|293416969|ref|ZP_06659606.1| yhjG protein [Escherichia coli B185]
 gi|291431545|gb|EFF04530.1| yhjG protein [Escherichia coli B185]
          Length = 691

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/403 (12%), Positives = 115/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++A+  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKASAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +    K         + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|301028220|ref|ZP_07191489.1| AsmA family protein [Escherichia coli MS 196-1]
 gi|299878706|gb|EFI86917.1| AsmA family protein [Escherichia coli MS 196-1]
          Length = 686

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 112/403 (27%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+        S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFKGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|332996213|gb|EGK15840.1| asmA family protein [Shigella flexneri VA-6]
          Length = 686

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 115/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +  +F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGVFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +    L     F  +         +         +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYIFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|330807273|ref|YP_004351735.1| hypothetical protein PSEBR_a583 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375381|gb|AEA66731.1| Conserved hypothetical protein; putative exported protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 691

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/340 (13%), Positives = 97/340 (28%), Gaps = 42/340 (12%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRI 71
             F DW   +     + +  + +  A+ G + +              LP+P V  +D+ +
Sbjct: 26  IAFFDWNRIKPTLNAKVSEELHRPFAINGNLAVAWQREPEEGGWRAWLPWPHVVAEDLSL 85

Query: 72  DQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-- 127
              E         ++ + +R   L LL+  + +  + + +P  N    + G +NW  +  
Sbjct: 86  GNPEWSKTPQMVTLKRVELRVSPLALLARRVAIPRIDLTEPDANLQRLADGRANWTFQFD 145

Query: 128 ---KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
                       V +  I    G + + DQ       L    L     F +I+   +   
Sbjct: 146 PKDPDAEPSSWVVDIGAIGFDKGHVTLDDQTLKTRLDLLIDPLGKPIPFSDIVGDKAAKK 205

Query: 185 IKG--------SVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDL 234
            +         +   +  G +  +  A           ++ +    +Q         ++L
Sbjct: 206 AQDQGAIPQDYAFAFKVDGQYHGQALAGSGKVGGLLALQDASRPFPLQAQAKIAETRVEL 265

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-R 284
            G L              +AG+    L                  RL        G + R
Sbjct: 266 AGTLTDPMNLGALDLRLKLAGNSLAHLYPLTGVTLPDSPPYATDGRLIAKLHEPGGALFR 325

Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
              +  +    +   D      V+      L+ +    + 
Sbjct: 326 YEAFNGKIGDSDIHGDL---AYVASQPRPKLSGALVSNQL 362


>gi|157156366|ref|YP_001464994.1| AsmA family protein [Escherichia coli E24377A]
 gi|157078396|gb|ABV18104.1| AsmA family protein [Escherichia coli E24377A]
          Length = 686

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|26250157|ref|NP_756197.1| hypothetical protein c4335 [Escherichia coli CFT073]
 gi|227883684|ref|ZP_04001489.1| AsmA family protein [Escherichia coli 83972]
 gi|300971343|ref|ZP_07171412.1| AsmA family protein [Escherichia coli MS 45-1]
 gi|26110586|gb|AAN82771.1|AE016768_189 Hypothetical protein yhjG [Escherichia coli CFT073]
 gi|227839264|gb|EEJ49730.1| AsmA family protein [Escherichia coli 83972]
 gi|300411267|gb|EFJ94805.1| AsmA family protein [Escherichia coli MS 45-1]
 gi|307555627|gb|ADN48402.1| AsmA family protein [Escherichia coli ABU 83972]
 gi|315295422|gb|EFU54752.1| AsmA family protein [Escherichia coli MS 153-1]
          Length = 691

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|254163446|ref|YP_003046554.1| putative outer membrane biogenesis protein [Escherichia coli B str.
           REL606]
 gi|253975347|gb|ACT41018.1| predicted outer membrane biogenesis protein [Escherichia coli B
           str. REL606]
          Length = 691

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 51/403 (12%), Positives = 114/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L    S         
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTSVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|157369821|ref|YP_001477810.1| putative assembly protein [Serratia proteamaculans 568]
 gi|157321585|gb|ABV40682.1| AsmA family protein [Serratia proteamaculans 568]
          Length = 611

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 38/367 (10%), Positives = 106/367 (28%), Gaps = 53/367 (14%)

Query: 18  VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG 77
            G   + L ++  DFR     +     G  + + G ++ HI P  S+    + +      
Sbjct: 17  AGMSALVLLVNPNDFRAYMVTKVEQKSGYHLTLDGDLRWHIWPQLSILAGRMTLTAPGAK 76

Query: 78  SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-------KST 130
           +     + + +  + LPLLS ++ V  + +    +     S+  +            + +
Sbjct: 77  APVVSADNMRLDVKLLPLLSHQLFVKQVMLKNAVIRLTPDSEEQNQPDAPIAPAGHAEES 136

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
           +D      ++ + V    + I  + +++   + D+NL +                     
Sbjct: 137 VDTPWKFDIDNLRVVD-SLLIWQRANNEQINVRDINLTLQQNAKR--------------- 180

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250
                     +       N   ++   +L   +    YP  I             +    
Sbjct: 181 --------QAQMELSSRVNRNQRDLTFNLAADIDLQQYPRRIAAN----------VTQFS 222

Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD 310
           + + G       ++       +   ++ +   + +S+  L      + +       +   
Sbjct: 223 YQLEGADILAGGIKGDGSTKVV---YQQTPQQLALSQLSLGV----NDSTFSGGVSIQFG 275

Query: 311 EENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQ 370
           E      +   A    D   + +     + ++  ++    +  S           + E  
Sbjct: 276 EIPAYTLNLTSAAVNFDAF-SGWQSSSSQVSQVQNVTSSPVIASQMDDP----QQNLEVL 330

Query: 371 ENFSGDK 377
             F+   
Sbjct: 331 REFNAQL 337


>gi|116053028|ref|YP_793347.1| hypothetical protein PA14_64510 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115588249|gb|ABJ14264.1| putative exported protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 689

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 53/419 (12%), Positives = 111/419 (26%), Gaps = 46/419 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56
           R++L        ++L          DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREE 64

Query: 57  ------HILPFPSVFFKDIRIDQKED------GSFESKIEGLSMRAEFLPLLSGEIRVFD 104
                   +P+P    +DI +   E        S  + +E +  R   LPLL   IR+  
Sbjct: 65  GEEGWRAWIPWPRFSAEDITLGNPEWTAGKTKASEFASLERIEFRLAPLPLLWQTIRIPQ 124

Query: 105 MYIDQPHLNFYLSSKGVSNW----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           + + QP  +    + G +NW        S       + + +I    G + + DQ      
Sbjct: 125 IKLTQPRADLLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRL 184

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAK 213
            +    L     F  +                    +  G +  +  A           +
Sbjct: 185 EVLVDPLGKPVPFGQLAGKALATGDAADAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQ 244

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
           + +    +Q    A      + G L              ++G     L            
Sbjct: 245 DASKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTP 304

Query: 271 ------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGA 322
                  L    K   G + R   +  +    +           V++     L+      
Sbjct: 305 AYSTDGHLLARLKEEGGALFRYENFNGKVGASD----LHGSLTFVARQPRPKLSGKLTSE 360

Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS--HDKENQENFSGDKMI 379
           +            +   + +            V   EE       D +    F+G +++
Sbjct: 361 QLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIV 419


>gi|82545888|ref|YP_409835.1| hypothetical protein SBO_3523 [Shigella boydii Sb227]
 gi|89110489|ref|AP_004269.1| predicted outer membrane biogenesis protein [Escherichia coli str.
           K-12 substr. W3110]
 gi|170018247|ref|YP_001723201.1| AsmA family protein [Escherichia coli ATCC 8739]
 gi|170083035|ref|YP_001732355.1| outer membrane biogenesis protein [Escherichia coli str. K-12
           substr. DH10B]
 gi|218556074|ref|YP_002388987.1| putative outer membrane biogenesis protein [Escherichia coli IAI1]
 gi|218697233|ref|YP_002404900.1| putative outer membrane biogenesis protein [Escherichia coli 55989]
 gi|238902613|ref|YP_002928409.1| putative outer membrane biogenesis protein [Escherichia coli
           BW2952]
 gi|253771645|ref|YP_003034476.1| AsmA family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254038702|ref|ZP_04872758.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
 gi|260846313|ref|YP_003224091.1| putative outer membrane biogenesis protein [Escherichia coli
           O103:H2 str. 12009]
 gi|300907581|ref|ZP_07125217.1| AsmA family protein [Escherichia coli MS 84-1]
 gi|300927982|ref|ZP_07143539.1| AsmA family protein [Escherichia coli MS 187-1]
 gi|301306830|ref|ZP_07212880.1| AsmA family protein [Escherichia coli MS 124-1]
 gi|301646052|ref|ZP_07245957.1| AsmA family protein [Escherichia coli MS 146-1]
 gi|309796161|ref|ZP_07690572.1| AsmA family protein [Escherichia coli MS 145-7]
 gi|331644233|ref|ZP_08345362.1| AsmA family protein [Escherichia coli H736]
 gi|332282085|ref|ZP_08394498.1| outer membrane biogenesis protein [Shigella sp. D9]
 gi|81247299|gb|ABB68007.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|85676520|dbj|BAE77770.1| predicted outer membrane biogenesis protein [Escherichia coli str.
           K12 substr. W3110]
 gi|169753175|gb|ACA75874.1| AsmA family protein [Escherichia coli ATCC 8739]
 gi|169890870|gb|ACB04577.1| predicted outer membrane biogenesis protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|218353965|emb|CAV00426.1| putative outer membrane biogenesis protein [Escherichia coli 55989]
 gi|218362842|emb|CAR00472.1| putative outer membrane biogenesis protein [Escherichia coli IAI1]
 gi|226839208|gb|EEH71231.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
 gi|238862705|gb|ACR64703.1| predicted outer membrane biogenesis protein [Escherichia coli
           BW2952]
 gi|253322689|gb|ACT27291.1| AsmA family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253979503|gb|ACT45173.1| predicted outer membrane biogenesis protein [Escherichia coli
           BL21(DE3)]
 gi|257761460|dbj|BAI32957.1| predicted outer membrane biogenesis protein [Escherichia coli
           O103:H2 str. 12009]
 gi|260447461|gb|ACX37883.1| AsmA family protein [Escherichia coli DH1]
 gi|300400698|gb|EFJ84236.1| AsmA family protein [Escherichia coli MS 84-1]
 gi|300463989|gb|EFK27482.1| AsmA family protein [Escherichia coli MS 187-1]
 gi|300837949|gb|EFK65709.1| AsmA family protein [Escherichia coli MS 124-1]
 gi|301075723|gb|EFK90529.1| AsmA family protein [Escherichia coli MS 146-1]
 gi|308120222|gb|EFO57484.1| AsmA family protein [Escherichia coli MS 145-7]
 gi|309703930|emb|CBJ03271.1| putative outer membrane assembly protein [Escherichia coli ETEC
           H10407]
 gi|313848778|emb|CAQ33842.2| predicted outer membrane biogenesis protein [Escherichia coli
           BL21(DE3)]
 gi|315062803|gb|ADT77130.1| predicted outer membrane biogenesis protein [Escherichia coli W]
 gi|315254048|gb|EFU34016.1| AsmA family protein [Escherichia coli MS 85-1]
 gi|324021174|gb|EGB90393.1| AsmA family protein [Escherichia coli MS 117-3]
 gi|331036527|gb|EGI08753.1| AsmA family protein [Escherichia coli H736]
 gi|332104437|gb|EGJ07783.1| outer membrane biogenesis protein [Shigella sp. D9]
          Length = 691

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|238750209|ref|ZP_04611711.1| hypothetical protein yrohd0001_11430 [Yersinia rohdei ATCC 43380]
 gi|238711442|gb|EEQ03658.1| hypothetical protein yrohd0001_11430 [Yersinia rohdei ATCC 43380]
          Length = 702

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 45/408 (11%), Positives = 114/408 (27%), Gaps = 65/408 (15%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           +VL G+  +  ++L       L  DW   +     + ++ + +  A++G + +       
Sbjct: 6   KVLAGVSAVILLLLAAVIVFVLTFDWNRLKPTINEKVSVELQRPFAIRGNLGVDWSRKDS 65

Query: 58  ------ILPFPSVFFKDIRIDQKE----------------DGSFESKIEGLSMRAEFLPL 95
                  +P+P +  +D+ +                           ++ +      L L
Sbjct: 66  QPGWRGWVPWPHIHAEDLVLGNPANLVSEQGADKTQSTSFPAGEMVTLKRVDASIAPLAL 125

Query: 96  LSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------FQRKSTMDMIHNVILEKIHVKGGR 148
           L+ ++ +  +++ QP  N    + G +NW         +  +     +V +  I    G 
Sbjct: 126 LAKKVVIPRIWLTQPDANLRRLANGKNNWTFNLANSPTQGDSSPSSWSVNIHDIVFDRGE 185

Query: 149 IKIIDQESDQVYFL------------SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196
           I + D        +              + ++       +   +  ++       +  G 
Sbjct: 186 INLQDAILKADLQVVIDPLGKPLPFAEVIGVRNQKTGNQLADKVKSNTADYIFGWKVEGK 245

Query: 197 FDNKRSAFKITANFPA--KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254
           +  +               +  +   +Q    +      + G L             + +
Sbjct: 246 YQGQPLTGSGKMGGMLSMSDANVPFPLQADVRSGTTRATVVGTLTDPGNLAGLDLQLTFS 305

Query: 255 GDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNK 304
           G     L   +              RL  + K SDG V R   +  +    +   +    
Sbjct: 306 GTSLDNLYPLIGVLLPATPPYNTDGRLITSLKQSDGTVYRYENFNGKIGESDIHGNLTYT 365

Query: 305 TK------VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346
            +              L F++       D N+      E  +   + +
Sbjct: 366 ARQPRPSLAGNLSSEKLRFTDLAPLIGADSNQEKARRGERNRQPANKV 413


>gi|91213030|ref|YP_543016.1| hypothetical protein UTI89_C4056 [Escherichia coli UTI89]
 gi|117625807|ref|YP_859130.1| putative outer membrane biogenesis protein YhjG [Escherichia coli
           APEC O1]
 gi|218691808|ref|YP_002400020.1| putative outer membrane biogenesis protein [Escherichia coli ED1a]
 gi|237703293|ref|ZP_04533774.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|91074604|gb|ABE09485.1| hypothetical protein YhjG [Escherichia coli UTI89]
 gi|115514931|gb|ABJ03006.1| putative outer membrane biogenesis protein YhjG [Escherichia coli
           APEC O1]
 gi|218429372|emb|CAR10334.2| putative outer membrane biogenesis protein [Escherichia coli ED1a]
 gi|226902557|gb|EEH88816.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|315286206|gb|EFU45642.1| AsmA family protein [Escherichia coli MS 110-3]
 gi|315295818|gb|EFU55135.1| AsmA family protein [Escherichia coli MS 16-3]
          Length = 691

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|300916749|ref|ZP_07133460.1| AsmA family protein [Escherichia coli MS 115-1]
 gi|300415971|gb|EFJ99281.1| AsmA family protein [Escherichia coli MS 115-1]
          Length = 691

 Score =  130 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|300936728|ref|ZP_07151627.1| AsmA family protein [Escherichia coli MS 21-1]
 gi|300458160|gb|EFK21653.1| AsmA family protein [Escherichia coli MS 21-1]
          Length = 691

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 49/388 (12%), Positives = 109/388 (28%), Gaps = 36/388 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LLS  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLSKTVWLPWVKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLASDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSV 355
           L      +  +   K+   ++   + SV
Sbjct: 371 LGPLIGVDSGKGAEKSTRSEQKKGEKSV 398


>gi|15600072|ref|NP_253566.1| hypothetical protein PA4879 [Pseudomonas aeruginosa PAO1]
 gi|254238402|ref|ZP_04931725.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|9951153|gb|AAG08264.1|AE004901_6 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|126170333|gb|EAZ55844.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
          Length = 689

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/419 (12%), Positives = 111/419 (26%), Gaps = 46/419 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56
           R++L        ++L          DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREE 64

Query: 57  ------HILPFPSVFFKDIRIDQKED------GSFESKIEGLSMRAEFLPLLSGEIRVFD 104
                   +P+P    +DI +   E        S  + +E +  R   LPLL   IR+  
Sbjct: 65  GEEGWRAWIPWPRFSAEDITLGNPEWTAGKTKASEFASLERIEFRLAPLPLLWQTIRIPQ 124

Query: 105 MYIDQPHLNFYLSSKGVSNW----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           + + QP       + G +NW        S       + + +I    G + + DQ      
Sbjct: 125 IKLTQPRAELLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRL 184

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAK 213
            +    L     F  +           +        +  G +  +  A           +
Sbjct: 185 EVLVDPLGKPVPFGQLAGKALATGDAANAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQ 244

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
           + +    +Q    A      + G L              ++G     L            
Sbjct: 245 DASKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTP 304

Query: 271 ------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGA 322
                  L    K   G + R   +  +    +           V++     L+      
Sbjct: 305 AYSTDGHLLARLKEEGGALFRYENFNGKVGASD----LHGSLTFVARQPRPKLSGKLTSE 360

Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS--HDKENQENFSGDKMI 379
           +            +   + +            V   EE       D +    F+G +++
Sbjct: 361 QLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIV 419


>gi|218893974|ref|YP_002442843.1| hypothetical protein PLES_52651 [Pseudomonas aeruginosa LESB58]
 gi|218774202|emb|CAW30019.1| putative exported protein [Pseudomonas aeruginosa LESB58]
          Length = 689

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/419 (12%), Positives = 111/419 (26%), Gaps = 46/419 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56
           R++L        ++L          DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREE 64

Query: 57  ------HILPFPSVFFKDIRIDQKED------GSFESKIEGLSMRAEFLPLLSGEIRVFD 104
                   +P+P    +DI +   E        S  + +E +  R   LPLL   IR+  
Sbjct: 65  GEEGWRAWIPWPRFSAEDITLGNPEWAAGKTKASEFASLERIEFRLAPLPLLWQTIRIPQ 124

Query: 105 MYIDQPHLNFYLSSKGVSNW----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           + + QP       + G +NW        S       + + +I    G + + DQ      
Sbjct: 125 IKLTQPRAELLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRL 184

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAK 213
            +    L     F  +           +        +  G +  +  A           +
Sbjct: 185 EVLVDPLGKPVPFGQLAGKALATGDAANAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQ 244

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
           + +    +Q    A      + G L              ++G     L            
Sbjct: 245 DASKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTP 304

Query: 271 ------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGA 322
                  L    K   G + R   +  +    +           V++     L+      
Sbjct: 305 AYSTDGHLLARLKEEGGALFRYENFNGKVGASD----LHGSLTFVARQPRPKLSGKLTSE 360

Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS--HDKENQENFSGDKMI 379
           +            +   + +            V   EE       D +    F+G +++
Sbjct: 361 QLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIV 419


>gi|238761242|ref|ZP_04622219.1| hypothetical protein ykris0001_35940 [Yersinia kristensenii ATCC
           33638]
 gi|238761495|ref|ZP_04622471.1| hypothetical protein ykris0001_22350 [Yersinia kristensenii ATCC
           33638]
 gi|238700469|gb|EEP93210.1| hypothetical protein ykris0001_22350 [Yersinia kristensenii ATCC
           33638]
 gi|238700722|gb|EEP93462.1| hypothetical protein ykris0001_35940 [Yersinia kristensenii ATCC
           33638]
          Length = 709

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/428 (10%), Positives = 116/428 (27%), Gaps = 69/428 (16%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           +VL G+G +  ++L       +  DW   +     + +  + +  A++G + +       
Sbjct: 6   KVLAGIGGVIVLLLAAVIVFIMTFDWNRLKPTINEKVSTELQRPFAIRGNLGVDWSRKGD 65

Query: 58  ------ILPFPSVFFKDIRIDQKE-----------------------DGSFESKIEGLSM 88
                  +P+P +  +D+ +                                  ++ +  
Sbjct: 66  EPGWRGWVPWPHIHAEDLVLGNPANLVSDKTAGQAHSAAGNAESTAFPTGEMVTLKRVDA 125

Query: 89  RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ-------RKSTMDMIHNVILEK 141
               L LL+ E+ +  +++ QP  +    + G +NW            +     +V ++ 
Sbjct: 126 SIAPLALLTKEVWIPRIWLTQPDAHLLRLANGENNWTFNLANNTEEDKSTVSDWSVNIDD 185

Query: 142 IHVKGGRIKIIDQ--ESDQVYFLSDL-------NLQISARFLNIISPLSIDSIKGS---V 189
           I    G+I + D   ++D    +  L        +  +        P             
Sbjct: 186 IVFDRGQINLKDAVLKADLQVVIDPLGKPLPFAEVSGARNEKKEKQPAEKTQNNAPDFVF 245

Query: 190 IAEGTGNFDNKRSAFKITANFPA--KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
             +  G +  +               + +    +Q    +    + + G L         
Sbjct: 246 GWKVDGKYQGQPLTGSGKIGGMLSMSDASTPFPLQADVRSGSTRVAVAGTLTDPGNLAGL 305

Query: 248 SGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQSILPNS 297
                 +G     L   +              RL  + K + G V R   +  +    + 
Sbjct: 306 DLQLKFSGASLDNLYPLIGVLLPATPPYNTDGRLIASLKPAGGAVYRYENFNGKIGDSD- 364

Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNK 357
                N    +      L  + +  +            +  ++  N   +       V  
Sbjct: 365 --IHGNLAYTASQPRPKLTGNMSSDKLRFADLAPLIGADSNQEKANRGERSRQPSNKVLP 422

Query: 358 KEEKDNSH 365
            E+ D   
Sbjct: 423 TEKFDTKS 430


>gi|254244226|ref|ZP_04937548.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|126197604|gb|EAZ61667.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
          Length = 689

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/419 (12%), Positives = 111/419 (26%), Gaps = 46/419 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56
           R++L        ++L          DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREE 64

Query: 57  ------HILPFPSVFFKDIRIDQKED------GSFESKIEGLSMRAEFLPLLSGEIRVFD 104
                   +P+P    +DI +   E        S  + +E +  R   LPLL   IR+  
Sbjct: 65  GEEGWRAWIPWPRFSAEDITLGNPEWTAGKTKASEFASLERIEFRLAPLPLLWQTIRIPQ 124

Query: 105 MYIDQPHLNFYLSSKGVSNW----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           + + QP       + G +NW        S       + + +I    G + + DQ      
Sbjct: 125 IKLTQPRAELLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRL 184

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAK 213
            +    L     F  +           +        +  G +  +  A           +
Sbjct: 185 EVLVDPLGKPVPFGQLAGKALATGDAANAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQ 244

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
           + +    +Q    A      + G L              ++G     L            
Sbjct: 245 DASKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTP 304

Query: 271 ------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGA 322
                  L    K   G + R   +  +    +           V++     L+      
Sbjct: 305 AYSTDGHLLARLKEEGGALFRYENFNGKVGASD----LHGSLTFVARQPRPKLSGKLTSE 360

Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS--HDKENQENFSGDKMI 379
           +            +   + +            V   EE       D +    F+G +++
Sbjct: 361 QLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIV 419


>gi|331655150|ref|ZP_08356149.1| AsmA family protein [Escherichia coli M718]
 gi|331047165|gb|EGI19243.1| AsmA family protein [Escherichia coli M718]
          Length = 691

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 51/403 (12%), Positives = 114/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW    +  D           +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKNANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|301046593|ref|ZP_07193733.1| AsmA family protein [Escherichia coli MS 185-1]
 gi|300301431|gb|EFJ57816.1| AsmA family protein [Escherichia coli MS 185-1]
          Length = 607

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|323174172|gb|EFZ59800.1| asmA family protein [Escherichia coli LT-68]
          Length = 686

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 44/377 (11%), Positives = 101/377 (26%), Gaps = 35/377 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDYNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328
              G    KI      +  Y+  +     S    +    +      L       +     
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 329 NETDFFEEEEKKNKNDD 345
                  +  K  +   
Sbjct: 366 LGPLIGVDSGKGAEKSK 382


>gi|331665145|ref|ZP_08366046.1| AsmA family protein [Escherichia coli TA143]
 gi|331057655|gb|EGI29641.1| AsmA family protein [Escherichia coli TA143]
          Length = 686

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDGNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGEADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|323939496|gb|EGB35705.1| AsmA family protein [Escherichia coli E482]
          Length = 686

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|313109875|ref|ZP_07795807.1| hypothetical protein PA39016_002120009 [Pseudomonas aeruginosa
           39016]
 gi|310882309|gb|EFQ40903.1| hypothetical protein PA39016_002120009 [Pseudomonas aeruginosa
           39016]
          Length = 689

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/419 (12%), Positives = 111/419 (26%), Gaps = 46/419 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56
           R++L        ++L          DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREE 64

Query: 57  ------HILPFPSVFFKDIRIDQKED------GSFESKIEGLSMRAEFLPLLSGEIRVFD 104
                   +P+P    +DI +   E        S  + +E +  R   LPLL   IR+  
Sbjct: 65  GEEGWRAWIPWPRFSAEDITLGNPEWTAGKTKASEFASLERIEFRLAPLPLLWQTIRIPQ 124

Query: 105 MYIDQPHLNFYLSSKGVSNW----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           + + QP       + G +NW        S       + + +I    G + + DQ      
Sbjct: 125 IKLTQPRAELLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRL 184

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAK 213
            +    L     F  +           +        +  G +  +  A           +
Sbjct: 185 EVLVDPLGKPVPFGQLAGKALATGDAANAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQ 244

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
           + +    +Q    A      + G L              ++G     L            
Sbjct: 245 DASKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTP 304

Query: 271 ------RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGA 322
                  L    K   G + R   +  +    +           V++     L+      
Sbjct: 305 AYSTDGHLLARLKEEGGALFRYENFNGKVGASD----LHGSLTFVARQPRPKLSGKLTSE 360

Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS--HDKENQENFSGDKMI 379
           +            +   + +            V   EE       D +    F+G +++
Sbjct: 361 QLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIV 419


>gi|222035234|emb|CAP77979.1| Uncharacterized protein yhjG [Escherichia coli LF82]
          Length = 691

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|215488801|ref|YP_002331232.1| predicted outer membrane biogenesis protein [Escherichia coli
           O127:H6 str. E2348/69]
 gi|215266873|emb|CAS11314.1| predicted outer membrane biogenesis protein [Escherichia coli
           O127:H6 str. E2348/69]
          Length = 691

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|332084580|gb|EGI89774.1| asmA family protein [Shigella boydii 5216-82]
          Length = 686

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPKVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|284923549|emb|CBG36644.1| putative outer membrane assembly protein [Escherichia coli 042]
          Length = 691

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/403 (13%), Positives = 116/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVEWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW    +  D           +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDTNAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +  A K         + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLAGKGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLVD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSIQPAGKVLPYDRFETD 413


>gi|15833658|ref|NP_312431.1| hypothetical protein ECs4404 [Escherichia coli O157:H7 str. Sakai]
 gi|291284896|ref|YP_003501714.1| hypothetical protein G2583_4260 [Escherichia coli O55:H7 str.
           CB9615]
 gi|13363878|dbj|BAB37827.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|209755478|gb|ACI76051.1| hypothetical protein ECs4404 [Escherichia coli]
 gi|209755480|gb|ACI76052.1| hypothetical protein ECs4404 [Escherichia coli]
 gi|209755482|gb|ACI76053.1| hypothetical protein ECs4404 [Escherichia coli]
 gi|209755484|gb|ACI76054.1| hypothetical protein ECs4404 [Escherichia coli]
 gi|209755486|gb|ACI76055.1| hypothetical protein ECs4404 [Escherichia coli]
 gi|290764769|gb|ADD58730.1| hypothetical protein G2583_4260 [Escherichia coli O55:H7 str.
           CB9615]
          Length = 691

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|218560599|ref|YP_002393512.1| outer membrane biogenesis protein [Escherichia coli S88]
 gi|218367368|emb|CAR05147.1| putative outer membrane biogenesis protein [Escherichia coli S88]
          Length = 687

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|218707153|ref|YP_002414672.1| putative outer membrane biogenesis protein [Escherichia coli
           UMN026]
 gi|300897305|ref|ZP_07115740.1| AsmA family protein [Escherichia coli MS 198-1]
 gi|218434250|emb|CAR15168.1| putative outer membrane biogenesis protein [Escherichia coli
           UMN026]
 gi|300358929|gb|EFJ74799.1| AsmA family protein [Escherichia coli MS 198-1]
          Length = 691

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/403 (13%), Positives = 116/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVEWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW    +  D           +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDTNAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +  A K         + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLAGKGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSIQPAGKVLPYDRFETD 413


>gi|170680242|ref|YP_001745794.1| AsmA family protein [Escherichia coli SMS-3-5]
 gi|170517960|gb|ACB16138.1| AsmA family protein [Escherichia coli SMS-3-5]
          Length = 686

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 48/388 (12%), Positives = 109/388 (28%), Gaps = 36/388 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLELLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLGNDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSV 355
           L      +  +   K+   ++   + SV
Sbjct: 366 LGPLIGVDSGKGAEKSTRSEQKKGEKSV 393


>gi|209884257|ref|YP_002288114.1| AsmA [Oligotropha carboxidovorans OM5]
 gi|209872453|gb|ACI92249.1| AsmA [Oligotropha carboxidovorans OM5]
          Length = 660

 Score =  130 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 96/308 (31%), Gaps = 11/308 (3%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+ + +  +  V+  G       ID    R   E Q     G ++AV G   I + P 
Sbjct: 6   IRRLALPVAVVLGVLFAGLLAGSWLIDREAVRAAVEAQIRDATGLELAVSGRTDISLFPS 65

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             V    + +    +     + + L  +     L++G  RV D+ +  P ++  +   G 
Sbjct: 66  ARVTLDGVALKGATNDEPPLRSDRLQAKLSLFGLIAGHTRVTDVVLLAPRIHVSVDQDGR 125

Query: 122 SNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
           SNW        +        +V    + +  G +   D +++    +  ++L IS    +
Sbjct: 126 SNWAPVIQAFAQSVKPAATRDVWFSDVRITDGTLLYRDTKNNLKETVGGIDLAISLPSSS 185

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKI-TANFPAKNKAISLKIQLFPLAYPIIIDL 234
            +  +  ++   +   +G     +  +A     +    K     LK+            L
Sbjct: 186 RVFSMRGEATWHNERLDGNFTIADFLAAVNGEKSGLKVKLVGTPLKLSFDG-TMTNRSSL 244

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                     P   G+   AG      N         L     +   +V ++        
Sbjct: 245 LLEGTLAADMPSLRGMMRWAGHELPGAN---GFGPFSLKARANLVGSSVALTNVNTTLDG 301

Query: 295 PNSSTDED 302
             +     
Sbjct: 302 NAAEGVLT 309


>gi|149201230|ref|ZP_01878205.1| AsmA family protein [Roseovarius sp. TM1035]
 gi|149145563|gb|EDM33589.1| AsmA family protein [Roseovarius sp. TM1035]
          Length = 645

 Score =  130 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 56/388 (14%), Positives = 105/388 (27%), Gaps = 26/388 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R +   LG L  V+L        F+           Q T   G+++ + G  KI   P 
Sbjct: 1   MRWIFRALG-LVMVMLAIVLGALFFLPGERIARIAADQITKATGRQVTMSGDTKISFYPI 59

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V    + I   +        + + L +  E   L  G+IR+  +    P +    +  
Sbjct: 60  LGVSTGAVEIANADWSDAGPMLRADSLKIGVEPQALFGGDIRITGLEAVNPAIRLERARD 119

Query: 120 GVSNW------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
           G  NW                        + L++  + G  +   D  +  V   S+L+ 
Sbjct: 120 GQVNWELGVEGVAPSGQSDGPLATSNRLALTLDRALITGASLSYTDHATGTVQAFSNLDF 179

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
            +     +  +       +GS      G+ D             +   +       F   
Sbjct: 180 DLRWPDYDGTATFEAVLRQGSAPVTLAGHLDQVGQFIDGAVTGLSARLSGPGGSVAFAGR 239

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK-----SRLSGNFKISDGN 282
                 L G L  +          +  G     L   L A         L+    +S  N
Sbjct: 240 GGAQPQLQGRLDIDLG--DTDAFLAALGLDRLELPPSLGASIKGGTDLTLTDALDLSLRN 297

Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN---GAESMHDLNETDFFEEEEK 339
           + ++     +I   +             + N      +   GA+S    +    +     
Sbjct: 298 LTLN-LGGNAIAGAADIALGGDVPRINAQINAGALDLSRFAGADSTGSASPDSGWSTSPI 356

Query: 340 KNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
                 L   +I    +     D    K
Sbjct: 357 DASALALANGEIALVADSVNLGDLKLGK 384


>gi|262274491|ref|ZP_06052302.1| AsmA protein [Grimontia hollisae CIP 101886]
 gi|262221054|gb|EEY72368.1| AsmA protein [Grimontia hollisae CIP 101886]
          Length = 715

 Score =  130 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 58/422 (13%), Positives = 122/422 (28%), Gaps = 57/422 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++ L  L  L  +V+V    +  FI+  DF+     +     G+++ + G I     P 
Sbjct: 1   MKKFLSILLGLLLLVVVAVGAIIAFINPNDFKPLIANEVKKTTGRELVIDGDISWRFWPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +  + +     +        K++   +    +PLLS  + +  + +    +       
Sbjct: 61  LGLSVEQLAFKNPQGFAEPDMLKLDKAELSVAVMPLLSDTLDIGLVSLHGARIFIQTLPN 120

Query: 120 GVSNWFQRKSTMDM-----------------------IHNVILEKIHVKGGRIKIIDQES 156
           GVSN                                    + +  + +      + D  +
Sbjct: 121 GVSNLDGLSGETATETAPAENPEPVSNASSPAQASAADWTISIGGLELLDASATVRDDNA 180

Query: 157 DQVYFLSDLNLQISARFLNIISP--LSIDSIKGSVIAEGTGNFDN-----------KRSA 203
                +S LNL I      +  P    +D  + ++     G+ +            +   
Sbjct: 181 GTQSEISKLNLTIGKLETGVWVPIEFDVDGKQNALAFSAKGDAEAMIDKEIMKSQLRALT 240

Query: 204 FKITANFPAKN-KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV-----------F 251
              TA+       + SLK     L  P++ D       ++     SG             
Sbjct: 241 LAATASDAQTQLDSFSLKADRLGLGIPMVFDFSAKGKASDMAFDASGKTTAQIDEGVSLI 300

Query: 252 SVAGDFS----KLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
           + +G          +L     K  +SG+    +    ++  KL++         D K  +
Sbjct: 301 TASGLSLETTVSGTSLPRPEMKISVSGDVAFDNKAQTLAVEKLKA--AVDELGFDGKVSI 358

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
           +  E   + F  +      D        E  +K  +   +             K    D 
Sbjct: 359 ALAEIPSIRFDVHSPSINLDTFP-GGRAESTEKPASSGSEGIGSGRGDKSVGAKQPLSDV 417

Query: 368 EN 369
           E 
Sbjct: 418 EP 419


>gi|306816124|ref|ZP_07450262.1| putative outer membrane biogenesis protein [Escherichia coli NC101]
 gi|331659831|ref|ZP_08360769.1| AsmA family protein [Escherichia coli TA206]
 gi|294493686|gb|ADE92442.1| AsmA family protein [Escherichia coli IHE3034]
 gi|305850520|gb|EFM50977.1| putative outer membrane biogenesis protein [Escherichia coli NC101]
 gi|307628603|gb|ADN72907.1| putative outer membrane biogenesis protein [Escherichia coli UM146]
 gi|323949765|gb|EGB45649.1| AsmA family protein [Escherichia coli H252]
 gi|323954934|gb|EGB50714.1| AsmA family protein [Escherichia coli H263]
 gi|331053046|gb|EGI25079.1| AsmA family protein [Escherichia coli TA206]
          Length = 686

 Score =  130 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|320193964|gb|EFW68597.1| hypothetical protein YhjG [Escherichia coli WV_060327]
          Length = 686

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLASDDNKDTNAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|157163003|ref|YP_001460321.1| AsmA family protein [Escherichia coli HS]
 gi|187731640|ref|YP_001882213.1| AsmA family protein [Shigella boydii CDC 3083-94]
 gi|191165260|ref|ZP_03027103.1| AsmA family protein [Escherichia coli B7A]
 gi|193061773|ref|ZP_03042870.1| AsmA family protein [Escherichia coli E22]
 gi|193068565|ref|ZP_03049527.1| AsmA family protein [Escherichia coli E110019]
 gi|194428686|ref|ZP_03061223.1| AsmA family protein [Escherichia coli B171]
 gi|194431230|ref|ZP_03063523.1| AsmA family protein [Shigella dysenteriae 1012]
 gi|194435675|ref|ZP_03067778.1| AsmA family protein [Escherichia coli 101-1]
 gi|209920984|ref|YP_002295068.1| hypothetical protein ECSE_3793 [Escherichia coli SE11]
 gi|226524754|ref|NP_417981.2| Inner membrane protein, AsmA family [Escherichia coli str. K-12
           substr. MG1655]
 gi|256020871|ref|ZP_05434736.1| predicted outer membrane biogenesis protein [Shigella sp. D9]
 gi|256025751|ref|ZP_05439616.1| predicted outer membrane biogenesis protein [Escherichia sp.
           4_1_40B]
 gi|307140213|ref|ZP_07499569.1| putative outer membrane biogenesis protein [Escherichia coli H736]
 gi|307314348|ref|ZP_07593955.1| AsmA family protein [Escherichia coli W]
 gi|312972205|ref|ZP_07786379.1| asmA family protein [Escherichia coli 1827-70]
 gi|269849716|sp|P37645|YHJG_ECOLI RecName: Full=Uncharacterized protein yhjG
 gi|157068683|gb|ABV07938.1| AsmA family protein [Escherichia coli HS]
 gi|187428632|gb|ACD07906.1| AsmA family protein [Shigella boydii CDC 3083-94]
 gi|190904662|gb|EDV64368.1| AsmA family protein [Escherichia coli B7A]
 gi|192932563|gb|EDV85160.1| AsmA family protein [Escherichia coli E22]
 gi|192958216|gb|EDV88657.1| AsmA family protein [Escherichia coli E110019]
 gi|194413269|gb|EDX29554.1| AsmA family protein [Escherichia coli B171]
 gi|194420685|gb|EDX36761.1| AsmA family protein [Shigella dysenteriae 1012]
 gi|194425218|gb|EDX41202.1| AsmA family protein [Escherichia coli 101-1]
 gi|209914243|dbj|BAG79317.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|226510981|gb|AAC76549.2| Inner membrane protein, AsmA family [Escherichia coli str. K-12
           substr. MG1655]
 gi|306906063|gb|EFN36583.1| AsmA family protein [Escherichia coli W]
 gi|310334582|gb|EFQ00787.1| asmA family protein [Escherichia coli 1827-70]
 gi|315138100|dbj|BAJ45259.1| putative outer membrane biogenesis protein [Escherichia coli DH1]
 gi|323160581|gb|EFZ46522.1| asmA family protein [Escherichia coli E128010]
 gi|323182675|gb|EFZ68077.1| asmA family protein [Escherichia coli 1357]
 gi|323376609|gb|ADX48877.1| AsmA family protein [Escherichia coli KO11]
 gi|323959455|gb|EGB55112.1| AsmA family protein [Escherichia coli H489]
 gi|323971382|gb|EGB66621.1| AsmA family protein [Escherichia coli TA007]
 gi|324116605|gb|EGC10522.1| AsmA family protein [Escherichia coli E1167]
 gi|332084041|gb|EGI89248.1| asmA family protein [Shigella dysenteriae 155-74]
 gi|332089576|gb|EGI94680.1| asmA family protein [Shigella boydii 3594-74]
 gi|332345487|gb|AEE58821.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 686

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|331685179|ref|ZP_08385765.1| AsmA family protein [Escherichia coli H299]
 gi|331077550|gb|EGI48762.1| AsmA family protein [Escherichia coli H299]
          Length = 686

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 51/403 (12%), Positives = 114/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW    +  D           +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDTNAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|300815261|ref|ZP_07095486.1| AsmA family protein [Escherichia coli MS 107-1]
 gi|300532153|gb|EFK53215.1| AsmA family protein [Escherichia coli MS 107-1]
          Length = 691

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 49/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISVAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    K+      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKVDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|324007323|gb|EGB76542.1| AsmA family protein [Escherichia coli MS 57-2]
          Length = 691

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGEVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|74314222|ref|YP_312641.1| hypothetical protein SSON_3867 [Shigella sonnei Ss046]
 gi|73857699|gb|AAZ90406.1| conserved hypothetical protein [Shigella sonnei Ss046]
          Length = 691

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 112/403 (27%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +    +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWFKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|297539909|ref|YP_003675678.1| AsmA family protein [Methylotenera sp. 301]
 gi|297259256|gb|ADI31101.1| AsmA family protein [Methylotenera sp. 301]
          Length = 983

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 61/408 (14%), Positives = 123/408 (30%), Gaps = 42/408 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  L G+G L  +VL+    +    +  D+++           + + + G IK+   P 
Sbjct: 5   LKYSLYGVGGLIGLVLIAVGIIAATFNPNDYKQKVIDLVQEKKERTLKLDGDIKLAFWPK 64

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
                  + + + ++    + + G+ +    LPLL  E+ V  +YID    N      G 
Sbjct: 65  IGADLGKVSLSEHKNSKEFASLNGVKVSLALLPLLKKELVVDTVYIDGAQANIVKYKDGT 124

Query: 122 SNWFQ--RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           +N+     K          ++ +++    +   D+ +   Y +S  NL+     L     
Sbjct: 125 TNFDDLMSKEEESQDIKFDIDGVNITNSSLSYSDEGTGAKYNISKFNLKSGHIALAEPVD 184

Query: 180 LSIDS--------IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
           ++ D         I  +   +G    D +   F       A    +   +    +   + 
Sbjct: 185 ITTDFAVNSNQPEIAANANLKGNFLVDPETKHFVAKGLDAAIKGDL---LGGKNVDVTLS 241

Query: 232 IDLFG-----NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS------------- 273
            D+           +  + + SG F+ A    +L   +L+A+K  ++             
Sbjct: 242 GDVDAKPESREFLVDSLKLVGSGQFNEAKLSIELNAPKLNAQKDEVTSKKTTVTLMQEKA 301

Query: 274 ----------GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ-DEENLLNFSENGA 322
                      + K S   +  S    +            K           L F     
Sbjct: 302 GDTFKANLELADIKGSPKALESSGITGEISAVQGKRTVTGKFSSPFSGNLESLIFDLPKL 361

Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQ 370
               D+ +        K   N     D      N K   +    K N 
Sbjct: 362 AGNLDIKDPSLPNGGMKGLFNLSAHTDIKNELANSKFSLNIDDTKLNG 409


>gi|312968153|ref|ZP_07782363.1| asmA family protein [Escherichia coli 2362-75]
 gi|312286978|gb|EFR14888.1| asmA family protein [Escherichia coli 2362-75]
 gi|312948083|gb|ADR28910.1| putative outer membrane biogenesis protein [Escherichia coli O83:H1
           str. NRG 857C]
          Length = 686

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|27382205|ref|NP_773734.1| hypothetical protein blr7094 [Bradyrhizobium japonicum USDA 110]
 gi|27355376|dbj|BAC52359.1| blr7094 [Bradyrhizobium japonicum USDA 110]
          Length = 666

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 54/340 (15%), Positives = 116/340 (34%), Gaps = 31/340 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R+   +  L  V L+        I+    R+  E Q   + G +++V G I I +LP 
Sbjct: 29  MKRLGTPIAALLGVALIALIATSWLINRDALRKAVEAQIRDVTGLELSVAGPIDISVLPA 88

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             + F D+ +          +++ L+     LPLL     + D+ + +P ++  L   G 
Sbjct: 89  SYISFHDVGLKGGGTSDPALRVDVLTANLRLLPLLLQRFEIADLTLLRPRIHVSLKPDGE 148

Query: 122 SNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
           SNW        R       + V   +I ++ G +   D  +       D++L        
Sbjct: 149 SNWTPFIQTIARTMKPGAENQVSFSEIRIQDGVLNYEDAATHATEQFDDIDL-------- 200

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT-ANFPAKNKAISLKIQLFPLAYPIIIDL 234
               L+  SI  S  A G  ++  +R    I+ A+F A        ++    + P+ +  
Sbjct: 201 ---SLAWPSISRSFAATGQFDWRGERVDGSISFADFVAALSGDRSGLKARIASAPLKLAF 257

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRIS 286
            G++  N   P+  G  ++     +         +          L     +   ++ ++
Sbjct: 258 DGSVA-NRTSPMMEGTLTIDSPSLRNALRWTGQPQPGSGGFGRFALKARANVVGASIALT 316

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
              ++          +     + +    L  +        
Sbjct: 317 NVNVEL----DGNAAEGVMTYANNGRQTLQATLAADALDF 352


>gi|168746938|ref|ZP_02771960.1| AsmA family protein [Escherichia coli O157:H7 str. EC4113]
 gi|168753336|ref|ZP_02778343.1| AsmA family protein [Escherichia coli O157:H7 str. EC4401]
 gi|168759607|ref|ZP_02784614.1| AsmA family protein [Escherichia coli O157:H7 str. EC4501]
 gi|168765931|ref|ZP_02790938.1| AsmA family protein [Escherichia coli O157:H7 str. EC4486]
 gi|168772522|ref|ZP_02797529.1| AsmA family protein [Escherichia coli O157:H7 str. EC4196]
 gi|168779667|ref|ZP_02804674.1| AsmA family protein [Escherichia coli O157:H7 str. EC4076]
 gi|168785389|ref|ZP_02810396.1| AsmA family protein [Escherichia coli O157:H7 str. EC869]
 gi|168797354|ref|ZP_02822361.1| AsmA family protein [Escherichia coli O157:H7 str. EC508]
 gi|195935052|ref|ZP_03080434.1| hypothetical protein EscherichcoliO157_01110 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208806477|ref|ZP_03248814.1| AsmA family protein [Escherichia coli O157:H7 str. EC4206]
 gi|208811877|ref|ZP_03253206.1| AsmA family protein [Escherichia coli O157:H7 str. EC4045]
 gi|208818733|ref|ZP_03259053.1| AsmA family protein [Escherichia coli O157:H7 str. EC4042]
 gi|209398465|ref|YP_002273003.1| AsmA family protein [Escherichia coli O157:H7 str. EC4115]
 gi|217324670|ref|ZP_03440754.1| AsmA family protein [Escherichia coli O157:H7 str. TW14588]
 gi|254795477|ref|YP_003080314.1| putative outer membrane biogenesis protein [Escherichia coli
           O157:H7 str. TW14359]
 gi|261224839|ref|ZP_05939120.1| hypothetical protein EscherichiacoliO157_09607 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261254264|ref|ZP_05946797.1| hypothetical protein EscherichiacoliO157EcO_00370 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|187771819|gb|EDU35663.1| AsmA family protein [Escherichia coli O157:H7 str. EC4196]
 gi|188018399|gb|EDU56521.1| AsmA family protein [Escherichia coli O157:H7 str. EC4113]
 gi|189002291|gb|EDU71277.1| AsmA family protein [Escherichia coli O157:H7 str. EC4076]
 gi|189359373|gb|EDU77792.1| AsmA family protein [Escherichia coli O157:H7 str. EC4401]
 gi|189364515|gb|EDU82934.1| AsmA family protein [Escherichia coli O157:H7 str. EC4486]
 gi|189369517|gb|EDU87933.1| AsmA family protein [Escherichia coli O157:H7 str. EC4501]
 gi|189374667|gb|EDU93083.1| AsmA family protein [Escherichia coli O157:H7 str. EC869]
 gi|189379881|gb|EDU98297.1| AsmA family protein [Escherichia coli O157:H7 str. EC508]
 gi|208726278|gb|EDZ75879.1| AsmA family protein [Escherichia coli O157:H7 str. EC4206]
 gi|208733154|gb|EDZ81841.1| AsmA family protein [Escherichia coli O157:H7 str. EC4045]
 gi|208738856|gb|EDZ86538.1| AsmA family protein [Escherichia coli O157:H7 str. EC4042]
 gi|209159865|gb|ACI37298.1| AsmA family protein [Escherichia coli O157:H7 str. EC4115]
 gi|217320891|gb|EEC29315.1| AsmA family protein [Escherichia coli O157:H7 str. TW14588]
 gi|254594877|gb|ACT74238.1| predicted outer membrane biogenesis protein [Escherichia coli
           O157:H7 str. TW14359]
 gi|320191429|gb|EFW66079.1| hypothetical protein YhjG [Escherichia coli O157:H7 str. EC1212]
 gi|320639840|gb|EFX09434.1| hypothetical protein ECO5101_02480 [Escherichia coli O157:H7 str.
           G5101]
 gi|320645340|gb|EFX14356.1| hypothetical protein ECO9389_02224 [Escherichia coli O157:H- str.
           493-89]
 gi|320650651|gb|EFX19117.1| hypothetical protein ECO2687_05114 [Escherichia coli O157:H- str. H
           2687]
 gi|320655845|gb|EFX23768.1| hypothetical protein ECO7815_03500 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320666650|gb|EFX33633.1| hypothetical protein ECOSU61_16580 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326337478|gb|EGD61313.1| Uncharacterized protein YhjG [Escherichia coli O157:H7 str. 1044]
 gi|326340004|gb|EGD63811.1| Uncharacterized protein YhjG [Escherichia coli O157:H7 str. 1125]
          Length = 686

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|300950861|ref|ZP_07164743.1| AsmA family protein [Escherichia coli MS 116-1]
 gi|300955007|ref|ZP_07167417.1| AsmA family protein [Escherichia coli MS 175-1]
 gi|300318049|gb|EFJ67833.1| AsmA family protein [Escherichia coli MS 175-1]
 gi|300449837|gb|EFK13457.1| AsmA family protein [Escherichia coli MS 116-1]
          Length = 691

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 52/411 (12%), Positives = 115/411 (27%), Gaps = 38/411 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + + +
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLGK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376
           L      +  +   K+K  + KK +       K    +  + +  +   GD
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETDKWDVMDGD 421


>gi|293453829|ref|ZP_06664248.1| yhjG protein [Escherichia coli B088]
 gi|291321955|gb|EFE61386.1| yhjG protein [Escherichia coli B088]
          Length = 691

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISVAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|260857628|ref|YP_003231519.1| putative outer membrane biogenesis protein [Escherichia coli
           O26:H11 str. 11368]
 gi|260870250|ref|YP_003236652.1| putative outer membrane biogenesis protein [Escherichia coli
           O111:H- str. 11128]
 gi|300822081|ref|ZP_07102224.1| AsmA family protein [Escherichia coli MS 119-7]
 gi|301326672|ref|ZP_07219996.1| AsmA family protein [Escherichia coli MS 78-1]
 gi|331679601|ref|ZP_08380271.1| AsmA family protein [Escherichia coli H591]
 gi|257756277|dbj|BAI27779.1| predicted outer membrane biogenesis protein [Escherichia coli
           O26:H11 str. 11368]
 gi|257766606|dbj|BAI38101.1| predicted outer membrane biogenesis protein [Escherichia coli
           O111:H- str. 11128]
 gi|300525444|gb|EFK46513.1| AsmA family protein [Escherichia coli MS 119-7]
 gi|300846647|gb|EFK74407.1| AsmA family protein [Escherichia coli MS 78-1]
 gi|331072773|gb|EGI44098.1| AsmA family protein [Escherichia coli H591]
          Length = 691

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISVAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|293407141|ref|ZP_06651065.1| conserved hypothetical protein [Escherichia coli FVEC1412]
 gi|298382891|ref|ZP_06992486.1| yhjG protein [Escherichia coli FVEC1302]
 gi|291425952|gb|EFE98986.1| conserved hypothetical protein [Escherichia coli FVEC1412]
 gi|298276727|gb|EFI18245.1| yhjG protein [Escherichia coli FVEC1302]
          Length = 686

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 53/403 (13%), Positives = 116/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVEWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW    +  D           +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDTNAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +  A K         + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLAGKGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSIQPAGKVLPYDRFETD 408


>gi|189425282|ref|YP_001952459.1| hypothetical protein Glov_2223 [Geobacter lovleyi SZ]
 gi|189421541|gb|ACD95939.1| protein of unknown function DUF748 [Geobacter lovleyi SZ]
          Length = 1216

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 58/428 (13%), Positives = 132/428 (30%), Gaps = 67/428 (15%)

Query: 3   RRVLIGLGFLFS-VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R+++  G +F  +VL     +P+ I     +   E+  T  +G+   ++    +   PF
Sbjct: 15  KRLIVWGGSIFLFMVLFSTLVLPVII-----KSQAEKGITRAIGRSARIE---AVRFNPF 66

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             ++  K   + + +  S   +   L +      L        ++ +D+  +    ++  
Sbjct: 67  GMTLTVKGFSLFEPDARSPFIQFNSLRVSLSSASLFRFAPVADELSLDRLQVKLIRTAAN 126

Query: 121 VSNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQE--SDQVYFLSDLNLQIS 170
             N+         Q K          +  I ++G  I   D+     + + + +L   I 
Sbjct: 127 RYNFSDIIDRLAAQPKQEKSTTPRFSINNISLQGSSIDFEDRAVNGGKKHTIRELTFTIP 186

Query: 171 -----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
                       +     +I        +G      ++ +   N       +   +   P
Sbjct: 187 FISTIPYLAEQYTDPRFSAIINGARFSFSGKTRPLHNSMETNLNLKLAELDLPYYLAYLP 246

Query: 226 LAYPIIIDLFGNLFWN-----------EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS- 273
              PI +D  G L  +           + + +  G+  +     K  N    A   RL  
Sbjct: 247 AQMPIKLD-SGKLGLDLALTYRIHQNKKPELMIKGLTRLDEISVKEKNNASLASFKRLDV 305

Query: 274 -------------------GNFKISDGNVRISRYKLQSILPNSSTD-EDNKTKVSQDEEN 313
                                  +        +   Q +LP      +  K  V ++   
Sbjct: 306 VSKEVELFSRKVVLQQLALDGLTLQVERDSAGKLNFQRLLPAEPAAPKTGKKTVKKENSP 365

Query: 314 LLNFSE------NGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
            L          +GA S HD      F+    + +  ++K  ++  + N +   + S + 
Sbjct: 366 PLQLMVENLALTDGAVSFHDRQPAGGFK---SRLQAINVKLSNLSTTANTQSAYEISFNG 422

Query: 368 ENQENFSG 375
           ++ E F+ 
Sbjct: 423 DSAETFAA 430



 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 91/297 (30%), Gaps = 31/297 (10%)

Query: 41  TLIVGKKIAVKGGIKIHILPFPSV----FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL 96
           +  +G  +A+   I  +  P   +       +I + +K + S  +  + L + ++ + L 
Sbjct: 255 SGKLGLDLALTYRIHQNKKPELMIKGLTRLDEISVKEKNNAS-LASFKRLDVVSKEVELF 313

Query: 97  SGEIRVFDMYIDQPHLNFYLSSKGVSNWF---------------QRKSTMDMIHNVILEK 141
           S ++ +  + +D   L     S G  N+                  K        +++E 
Sbjct: 314 SRKVVLQQLALDGLTLQVERDSAGKLNFQRLLPAEPAAPKTGKKTVKKENSPPLQLMVEN 373

Query: 142 IHVKGGRIKIID--QESDQVYFLSDLNLQISARFLNIISPLSID-----SIKGSVIAEGT 194
           + +  G +   D          L  +N+++S       +  + +         +  A GT
Sbjct: 374 LALTDGAVSFHDRQPAGGFKSRLQAINVKLSNLSTTANTQSAYEISFNGDSAETFAASGT 433

Query: 195 GNFDNKRSAFKITANFPAKNKAISL--KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS 252
            +     +  +   +     +       +   P+   + +         +   +      
Sbjct: 434 ASLSPISATSRFNLSGIKLQRGWPYLQNLLTAPVNGNLSLAGKATFSAQDGVAVQDLAVH 493

Query: 253 VAGDFSKLLNLELS-AKKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
           +    +K  + + +      L+G +F   +    +   KL       S + D     
Sbjct: 494 LQDIAAKYGDKDSTRLTSLDLTGISFSQKENQAAVDEIKLAGGNIKLSREADGSISA 550


>gi|293412955|ref|ZP_06655623.1| yhjG protein [Escherichia coli B354]
 gi|291468602|gb|EFF11095.1| yhjG protein [Escherichia coli B354]
          Length = 686

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 112/403 (27%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V   DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHADDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|323189330|gb|EFZ74613.1| asmA family protein [Escherichia coli RN587/1]
          Length = 686

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 42/358 (11%), Positives = 98/358 (27%), Gaps = 35/358 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P +  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHIHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWAFNLASDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGIVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
              G    KI      +  Y+  +     S    +    +      L       +   
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRL 363


>gi|194290380|ref|YP_002006287.1| outer membrane biogenesis protein, asma family [Cupriavidus
           taiwanensis LMG 19424]
 gi|193224215|emb|CAQ70224.1| putative outer membrane biogenesis protein, AsmA family
           [Cupriavidus taiwanensis LMG 19424]
          Length = 776

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 53/415 (12%), Positives = 112/415 (26%), Gaps = 65/415 (15%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI---- 58
           R+V++        ++     V L  DW   +     + +  +G+  A+ G + +      
Sbjct: 5   RKVVLWSVLTPVALIALLVVVILTFDWNRIKPWLNDRVSEAIGRPFAINGDLTVTWRRGE 64

Query: 59  --------LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P+P +  +DI +   +       + +  L      LPLL+ EI V  + ID
Sbjct: 65  GEKGWRTLVPWPRLSARDITVGNPDWAAQPNMATVRELIFVLRPLPLLANEIAVPTIVID 124

Query: 109 QPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-----QVYF 161
            P +     +   +NW              + + ++ +  G + + DQ        ++  
Sbjct: 125 SPAVWLERLADSRNNWTFDTGPKEGTSKWQLDVGEVVLARGNLALTDQLKKISLQAELDT 184

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS------------------------------VIA 191
           + +  L   AR   ++ P +     G                               V  
Sbjct: 185 IGNAPLYDKARDGALVEPQASAVPPGPPGSAAQAASAPRAGGPASAAPANGGDGRYGVRW 244

Query: 192 EGTGNFDNKRSAFKITANF--PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
           + TG ++         A      +N  +   IQ           + G +           
Sbjct: 245 KATGRYNEATINASGKAGTVLSLRNTDVPFPIQADVRVGTTRAQIEGTVTNPAHLAALDV 304

Query: 250 VFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTD 300
             ++AGD    L                  RL    +         ++  +    + S  
Sbjct: 305 HLTLAGDSMARLYALTGVVLPSTPPYQTRGRLMATLRKEGSIYEYQKFTGRVGGSDLSGT 364

Query: 301 EDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV 355
                   +D   LL  +    +            + +      D          
Sbjct: 365 LT---FTKRDPRPLLAGNLVSNQLRFVDLAPLIGADAKPGRPAKDSPVAQPADKA 416


>gi|320661627|gb|EFX29042.1| hypothetical protein ECO5905_02492 [Escherichia coli O55:H7 str.
           USDA 5905]
          Length = 686

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 114/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L   +          
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELMGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|183598280|ref|ZP_02959773.1| hypothetical protein PROSTU_01666 [Providencia stuartii ATCC 25827]
 gi|188020451|gb|EDU58491.1| hypothetical protein PROSTU_01666 [Providencia stuartii ATCC 25827]
          Length = 615

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 51/374 (13%), Positives = 104/374 (27%), Gaps = 57/374 (15%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81
            + + ++  DFR+    Q     G ++  KG ++ H+ P  S+    + +          
Sbjct: 21  ALVMLVNPNDFRQYLVEQVEKKSGYQLDFKGDMRWHVWPTLSIITGPVSVTAPNASQPVL 80

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS----------NWFQRKSTM 131
             E + +  E  PLLS  + V  + +D   +     S+  +          N     ST 
Sbjct: 81  SAENMRLDVELWPLLSHRLSVEQIVLDGAVIRHTPESEAQTDANSPIAPAGNKQTPSSTE 140

Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA 191
                + +EK+ V    +    Q  +  Y L ++NL +                K +   
Sbjct: 141 KSQWLLDIEKVEVSNSLVIWKTQ--NDEYNLRNINLSLKKNDER----------KITAKF 188

Query: 192 EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
            G  N + +   F   A       +  +  QL                           +
Sbjct: 189 SGNLNKNQQELRFDARAELDLSQLSHQISGQL-----------------------TQFDY 225

Query: 252 SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE 311
           +  G       +       + + +F     NV  +      ++  + ++   K       
Sbjct: 226 TFTGVDLPEGGITG-----QFTSDFAYIKENVATASLN-NIVIKANESELTGKIAAQLGN 279

Query: 312 ENLLNFSENGAESMHDL------NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSH 365
              +    +      D                E  N      K  I     +K +  N  
Sbjct: 280 IPDVRVQLSSHRLNLDKLLGTPHTNAGSHNANESDNPARVGVKPVISGKETQKYDLSNLK 339

Query: 366 DKENQENFSGDKMI 379
                 + + D +I
Sbjct: 340 SFTANIDLNIDNLI 353


>gi|323166996|gb|EFZ52735.1| asmA family protein [Shigella sonnei 53G]
          Length = 686

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 49/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    +              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDIYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|331670355|ref|ZP_08371194.1| AsmA family protein [Escherichia coli TA271]
 gi|320198351|gb|EFW72954.1| hypothetical protein YhjG [Escherichia coli EC4100B]
 gi|323944505|gb|EGB40577.1| AsmA family protein [Escherichia coli H120]
 gi|331062417|gb|EGI34337.1| AsmA family protein [Escherichia coli TA271]
          Length = 686

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISVAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|325273647|ref|ZP_08139862.1| AsmA family protein [Pseudomonas sp. TJI-51]
 gi|324101215|gb|EGB98846.1| AsmA family protein [Pseudomonas sp. TJI-51]
          Length = 688

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/339 (12%), Positives = 95/339 (28%), Gaps = 38/339 (11%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRI 71
               DW   +     + +  + +  A+ G + +H             +P+P    +D+ +
Sbjct: 26  IATFDWNRVKPLLNEKVSEALHRPFAINGNLAVHWRTEPEEGGWRAWVPWPHFTAEDLTL 85

Query: 72  DQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--- 126
              E         +E +  R   LPLL  +I +  + + +P  +    + G +NW     
Sbjct: 86  GNPEWLQEPKMVGLERVEFRLAPLPLLVQKISIPRINLTKPTASLTRLADGRANWTFDFG 145

Query: 127 --RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
              ++       + +  I    G +   DQ       +    L     F  I+   S + 
Sbjct: 146 PKDENEAPSKWQLDIGAIGFDQGNVSFDDQTLKTRMKVQVAPLGKPIPFSEIVGKASAEK 205

Query: 185 IKG----SVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
             G    +   +  G +  +  +           ++      +Q         + L G L
Sbjct: 206 AGGAQDYAFAFKAQGRYKGQPVSGTGKIGGLLALQDATQPFPLQADVRIADTHVVLAGTL 265

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDG-NVRISRY 288
                         ++G     L                  RLS N   ++G   +   +
Sbjct: 266 TDPRNLGALDLRLRLSGASLGNLYPLTGVTLPDTPAYSTDGRLSANLHAAEGARFKYEGF 325

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
             +    +   D      V+      L       + +  
Sbjct: 326 NGKIGDSDIHGDL---AFVASQPRPKLTGKLVSNQLLFK 361


>gi|323179527|gb|EFZ65094.1| asmA family protein [Escherichia coli 1180]
          Length = 686

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISVAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|301025858|ref|ZP_07189346.1| AsmA family protein [Escherichia coli MS 69-1]
 gi|300395787|gb|EFJ79325.1| AsmA family protein [Escherichia coli MS 69-1]
          Length = 691

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/403 (12%), Positives = 115/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +  A K         + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGEADKEKVGDYVFGLKAQGRYNGEPLAGKGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTAGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|325499078|gb|EGC96937.1| outer membrane biogenesis protein [Escherichia fergusonii ECD227]
          Length = 686

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/377 (11%), Positives = 103/377 (27%), Gaps = 35/377 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITASIVGAFLLLIVVAIVLIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVIWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P +  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHIHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWVKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNFANDDNKDANAKPSAWSFRLDNILFDQGRIDIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +  +             +  G ++ +    K         + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGNADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328
              G    KI      +  Y+  +     S    +    +      L       +     
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 329 NETDFFEEEEKKNKNDD 345
                  +  K  +   
Sbjct: 366 LGPLIGVDSGKGAEKSK 382


>gi|238787710|ref|ZP_04631507.1| hypothetical protein yfred0001_24960 [Yersinia frederiksenii ATCC
           33641]
 gi|238724053|gb|EEQ15696.1| hypothetical protein yfred0001_24960 [Yersinia frederiksenii ATCC
           33641]
          Length = 705

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/411 (10%), Positives = 115/411 (27%), Gaps = 68/411 (16%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           +VL  +G +  +++  A    +  DW   +     + +  + +  A++G + +       
Sbjct: 6   KVLTVVGGIIMLLVAAAIVFVMTFDWNRLKPTINEKVSAELQRPFAIRGNLGVDWSRKGD 65

Query: 58  ------ILPFPSVFFKDIRIDQKED--------------------GSFESKIEGLSMRAE 91
                  +P+P++  +D+ +    D                          ++ +     
Sbjct: 66  EPGWRGWIPWPNIHAEDLVLGNPPDLVSDKAAKTSEDKAESTEFPTGEMVTLKRVDASIA 125

Query: 92  FLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHV 144
            L LL  E+ +  +++ QP+      + G +NW            +     +V +  I  
Sbjct: 126 PLALLGKEVLIPRIWLTQPNATLQRLANGKNNWTFNLANSSTDSESPPSSWSVDIHDIVF 185

Query: 145 KGGRIKIIDQ-----------ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193
             G I + D               +    +++    + +     +    ++       + 
Sbjct: 186 DSGEINLNDAILKADLHAVIDPLGKPLPFAEVIGGHNEKKDKSAADKVSNTPDYVFGWKI 245

Query: 194 TGNFDNKRSAFKITANFPA--KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
            G +  +               N  +   +Q    +    + + G L             
Sbjct: 246 DGKYQGQPLTGSGKIGGMLSMSNATMPFPLQADVRSGTTRVAVVGTLTDPGNLAGLDLEL 305

Query: 252 SVAGDFSKLLNLELSAKKSR---------LSGNFKISDGNV-RISRYKLQSILPNSSTDE 301
             +G     L   +               L  + K + G V R   +  +    +   + 
Sbjct: 306 KFSGASLDNLYPLIGVLLPATPPYNTDGHLIASLKQAGGAVYRYENFNGKIGDSDIHGNL 365

Query: 302 DNKTK------VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346
                      V +   N L F++       D N+      E  +   + +
Sbjct: 366 TYTASEPRPKLVGKLSSNTLRFADLAPLIGADSNQEKANRGERSRQPANKV 416


>gi|323154030|gb|EFZ40236.1| asmA family protein [Escherichia coli EPECa14]
          Length = 686

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISVAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|320183468|gb|EFW58317.1| hypothetical protein YhjG [Shigella flexneri CDC 796-83]
          Length = 686

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 114/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ ++             + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEQLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|58038719|ref|YP_190683.1| hypothetical protein GOX0244 [Gluconobacter oxydans 621H]
 gi|58001133|gb|AAW60027.1| Hypothetical membrane-spanning protein [Gluconobacter oxydans 621H]
          Length = 718

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/350 (12%), Positives = 105/350 (30%), Gaps = 38/350 (10%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64
           +L  +G +   ++     + L   W  F    +R+ T  + + +++   + + +    +V
Sbjct: 25  ILKTVGGVLGTLVAAIVILILVWQWDWFVPYIDRKGTAALHRPVSIA-HLHVGLGFKTTV 83

Query: 65  FFKDIRIDQKEDG----SFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSK 119
              D++I Q E         +  + +++  +    L+ G + +  +  D P  +      
Sbjct: 84  TVDDLKIGQPEGFEKEKDDFASAKAITVTVDVWRYLTGGGLSLPLIRADTPKGDIVSLLN 143

Query: 120 GVSNWFQRKSTMDMIHN--------VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
           G +N+    S+                L KI +  G I++   +      +         
Sbjct: 144 GTNNYSFASSSDPSSQTSSSSTTTLPKLGKIEINDGDIRLALAKLKTDMHV--------- 194

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP--AKNKAISLKIQLFPLAYP 229
               I +    +   G ++ +  G +        I         +      I       P
Sbjct: 195 ---LIHTEEPKNGDDGHLVIDLKGRYAQAPITGHIVGGALLGLTDATHPYPIDGRLANGP 251

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVR 284
             + L G +         +     AG    LL         +     ++GN   SD  +R
Sbjct: 252 TYVTLRGTVDDPIHFQGTNLALHFAGPDMALLYPLTGVPIPQTPAYSVTGNLAYSDRAIR 311

Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334
             +++      +          V   ++ +            DL +   F
Sbjct: 312 FQKFEGHMGSSD----IGGDINVDPHQKPIF-VEAALHSHSVDLADLGGF 356


>gi|324111851|gb|EGC05831.1| AsmA family protein [Escherichia fergusonii B253]
          Length = 686

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/377 (11%), Positives = 103/377 (27%), Gaps = 35/377 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITASIVGAFLLLIVVAIVLIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVIWERPKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P +  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHIHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWVKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKSSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +  +             +  G ++ +    K         + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGNADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328
              G    KI      +  Y+  +     S    +    +      L       +     
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 329 NETDFFEEEEKKNKNDD 345
                  +  K  +   
Sbjct: 366 LGPLIGVDSGKGAEKSK 382


>gi|331649345|ref|ZP_08350431.1| AsmA family protein [Escherichia coli M605]
 gi|331041843|gb|EGI13987.1| AsmA family protein [Escherichia coli M605]
          Length = 691

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 112/403 (27%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++    + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVPAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANGDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLSFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|188491975|ref|ZP_02999245.1| AsmA family protein [Escherichia coli 53638]
 gi|188487174|gb|EDU62277.1| AsmA family protein [Escherichia coli 53638]
          Length = 686

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEAPLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIVIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|15804068|ref|NP_290104.1| hypothetical protein Z4937 [Escherichia coli O157:H7 EDL933]
 gi|12518239|gb|AAG58665.1|AE005578_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
          Length = 691

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFXGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|146338317|ref|YP_001203365.1| outer membrane protein assembly protein AsmA [Bradyrhizobium sp.
           ORS278]
 gi|146191123|emb|CAL75128.1| possible asmA protein, assembly of outer membrane proteins
           [Bradyrhizobium sp. ORS278]
          Length = 653

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/339 (17%), Positives = 115/339 (33%), Gaps = 23/339 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+   +  L  +  VG  T    ++    R   E Q   + G ++ VKG I + + P 
Sbjct: 9   MRRLGTPIAVLLGIAFVGLLTSSWLVNRDALRRAVETQIRAVTGLELVVKGPIDVSLFPG 68

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             V F D+            +++ L+   + LPLL     + D+ + +P +N    + G 
Sbjct: 69  SYVSFHDVGFKGSTADDPALRVDVLTANLQLLPLLLQRFEIADVMMLRPQINVTREANGN 128

Query: 122 SNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
           SNW        R         +   +I ++ G +   D        L D++L        
Sbjct: 129 SNWTPFIDTITRTMRPGSDSQMSFSEIRIQDGVLTYDDNGHHASERLDDIDL-------- 180

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPIIIDL 234
               L+  SI  S  A G  ++  +R    ++ +      +     +++   + P+ +  
Sbjct: 181 ---SLAWPSISRSFAATGQFDWRGQRIEGSVSISDFLAALSGDRSGLKMRLASPPLKVAF 237

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
            G +  N    +  G  +V     +   L  + +    SG F       R +       L
Sbjct: 238 DGTVA-NRTSALMEGTLTVDSPSLRD-ALRWTGQTPLGSGGFGRFALRARANVVGASVAL 295

Query: 295 PNSSTDEDNKTK---VSQDEENLLNFSENGAESMHDLNE 330
            N + + D       ++       +     A    D   
Sbjct: 296 TNVNVELDGNAAEGVMTYANNGRQSLQATLAADALDFTP 334


>gi|146284408|ref|YP_001174561.1| hypothetical protein PST_4096 [Pseudomonas stutzeri A1501]
 gi|145572613|gb|ABP81719.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
          Length = 740

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/414 (13%), Positives = 122/414 (29%), Gaps = 74/414 (17%)

Query: 18  VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-D 76
              F +    D  D++++    A    G ++ +KG I   + P+  +   D  +   +  
Sbjct: 21  AAGFALTHLFDPNDYKDEIRDLARNNAGLELDIKGDIGWSLFPWLGLELHDTTLASAQTP 80

Query: 77  GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF----------- 125
           G   + +  L +    +PLLS E+++ D+ ++  +L      +G  NW            
Sbjct: 81  GQPFADLRMLGLSVRVMPLLSREVQMSDITVNGLNLTLSRDEQGRGNWEGVGQPAGRREQ 140

Query: 126 ---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
                          +  S       + ++ + V   R+   D ++ Q Y    + L   
Sbjct: 141 AGEPPKAAEPQTEQREEASPARKPLTLDIDSLTVSDARVTYSDAKTGQQYSAESIELTTG 200

Query: 171 ARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAFKI---TANFPAKNKAISL 219
           A       P+ +++  GS           +G   FDN+   ++      +  A  + +  
Sbjct: 201 AIREGSSIPVKLNAFFGSNQPVMRARTELQGALRFDNQLKRYQFEDMRLSGEASGEPLQG 260

Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
           +   F     +++DL   +         +            L      K+ ++SG   ++
Sbjct: 261 QTLTFSAQGQLLVDLAAQIAEWNSLKFTANQLR----GLGELKARDLDKEPKISGAMTVA 316

Query: 280 DGNVR------------------------ISRYKLQSILPN--------SSTDEDNKTKV 307
             N+R                        +SR    +              +    +  +
Sbjct: 317 QFNLREFLQGTGQQLPAMADGNALNRAELVSRLSGTANSLALEELTLKLDDSTFTGRIAI 376

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361
           S      L     G     D       ++E          K+    +V      
Sbjct: 377 SDFARQALRVDLKGDRLNLDRYLPPPSKDEPAGAARKSEVKNTQAAAVGSGSTP 430


>gi|89092427|ref|ZP_01165381.1| AsmA family superfamily protein [Oceanospirillum sp. MED92]
 gi|89083515|gb|EAR62733.1| AsmA family superfamily protein [Oceanospirillum sp. MED92]
          Length = 711

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 64/405 (15%), Positives = 128/405 (31%), Gaps = 49/405 (12%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +L+ VL  + F+  +++ G   +    D  +++ + E+ A    G ++ + G I   + P
Sbjct: 4   LLKVVLGLVAFIVVLIVAGGAILSTVFDPNEYKPEIEKAALENSGVELKINGDIGWSVFP 63

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           +  +    I +         + +    +      LLSG++ +  + +D   LN    + G
Sbjct: 64  WLGLEVNKIDVQYP-GKQQLASLNQAQVSVRLPALLSGQVEMQSVVVDGLKLNLVKEADG 122

Query: 121 VSNWF--------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
            SNW                        +       + ++ I +  G I  +D+ ++   
Sbjct: 123 SSNWAADVSTKQVEKSSEDQGSSTQASAAESGAAIALNIDSIQITNGLINYLDKTTETEA 182

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            LSD N+       N   P  +         +G    +  ++    +A F         K
Sbjct: 183 TLSDFNMTSGQVVTNAFFPAELSFNAVQ-KVKGE---EQIKAGANFSAEFFLDLTNQLYK 238

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280
           I+       +     G                +A     L NL LS    + +G   +++
Sbjct: 239 IKGLNSELALSGKPLGGKSLTISTAA-DIEADLAKQALSLNNLNLSLANLKATGALAVNN 297

Query: 281 -------GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
                  G + +  + L  +L +    E   T  S  +    +    G            
Sbjct: 298 FASPEISGKLSVPAFDLNKLLVSVGQAEVKTTDASVLKAISFDTELAGPA---------- 347

Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378
                   K   LK DD  ++ N   +           N  GDK+
Sbjct: 348 ---NTVTAKTLSLKLDDTSFNGNAAYDLK---SGNITLNLQGDKL 386


>gi|85716108|ref|ZP_01047084.1| Uncharacterized protein involved in outer membrane biogenesis
           [Nitrobacter sp. Nb-311A]
 gi|85697107|gb|EAQ34989.1| Uncharacterized protein involved in outer membrane biogenesis
           [Nitrobacter sp. Nb-311A]
          Length = 643

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/342 (16%), Positives = 110/342 (32%), Gaps = 26/342 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVP---LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58
           ++R+ I +  +  V ++G   +      +D    R+  E Q   + G      G I + +
Sbjct: 1   MKRLGISVAAILGVAVIGLTALISMSRLLDHDALRDAVESQIRTVTGLDFIANGRIDVSV 60

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
            P   V F D+RI   +  +    +E L+     LPLL    ++ D+ +  P++    ++
Sbjct: 61  FPASYVSFHDVRIKGSDADAPALSVEVLTANLRLLPLLMQHFQIADVMLLHPYIRVKRAA 120

Query: 119 KGVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
            G SNW        R         V   +I ++ G +   D   +    L  ++L     
Sbjct: 121 DGRSNWTPFVETIARNMKPGADSPVSFSEIQIQNGELSYEDAAGEISENLGGIDL----- 175

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPII 231
                  L+  SI  S  A G  ++  +R    I  +      +     +++   +  + 
Sbjct: 176 ------SLAWPSISRSFAATGQFDWRGERVDGSIGLSDFLAALSGERSGLKIKVTSPRLK 229

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
               G +       +  G  S      +     +       SG F       R S     
Sbjct: 230 FAFEGTVANPISL-MMEGTLSADSASLREALRWIGRPPPGSSG-FDRFALKARASLIGSS 287

Query: 292 SILPNSSTDEDN---KTKVSQDEENLLNFSENGAESMHDLNE 330
             L N + + D    +  ++             A    D   
Sbjct: 288 LALTNVNLEIDGNVAEGVMTYANNGRQTLQATLAAGTLDFTP 329


>gi|213967960|ref|ZP_03396106.1| AsmA family protein [Pseudomonas syringae pv. tomato T1]
 gi|213927303|gb|EEB60852.1| AsmA family protein [Pseudomonas syringae pv. tomato T1]
          Length = 748

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/381 (11%), Positives = 100/381 (26%), Gaps = 45/381 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    +VL     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 65  RKIFAWTGTTLLLVLAVLVIVIVTFDWNRIKPTLNEKVSEALQRPFAINGDLDVRWTREP 124

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   +         ++ +  R   LPLL  ++ +  + + 
Sbjct: 125 ELGGWRAWVPSPHFVADDLTLGNPDWSKTPQMVNLKHVEFRLSLLPLLVQQVVIPRIDLT 184

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       + +  I    G +   DQ  +    + 
Sbjct: 185 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVIDIGAIKFDKGLVSFNDQTLNANLDVV 244

Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212
            +++       + I                   +      G +  ++ +           
Sbjct: 245 -IDMLGKPIPFSEIVGSKEAQKAQEKGSVPQDYAFGLAVKGQYHGQKLSGTGKIGGLLAL 303

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270
           K+ +    +Q           + G L   +          ++G     L           
Sbjct: 304 KDASQPFPVQADVKIGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 363

Query: 271 -------RLSGNF-KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321
                  RL       +  N R   +  +    +   D      V+      L+    + 
Sbjct: 364 PAYSTDGRLVAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSN 420

Query: 322 AESMHDLNETDFFEEEEKKNK 342
                DL      +    + K
Sbjct: 421 QLLFSDLAPLIGADSNAAQKK 441


>gi|330960051|gb|EGH60311.1| AsmA family protein [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 688

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/380 (11%), Positives = 99/380 (26%), Gaps = 43/380 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    V+L     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIFAWTGITLVVLLALLVIVIVTFDWNRIKPTLNTKVSEALHRPFAINGDVDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   E         ++ +  R   LPLL  ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLALGNPEWSKTPQMVTLKHVEFRLSLLPLLVQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       + +  I    G +   DQ  +    + 
Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVIDIGAIKFDKGLVSFNDQTLNANLDVV 184

Query: 164 --------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAK 213
                     +  + ++               +     TG +  ++ +           K
Sbjct: 185 IDMLGKPIPFSEIVGSKEAKKAQDKGAVPQDYAFGLAVTGQYHGQKLSGTGKIGGLLALK 244

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
           +      +Q           + G L   +          ++G     L            
Sbjct: 245 DANQPFPVQADVKVGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVALPDSP 304

Query: 271 ------RLSGNF-KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENGA 322
                 RL       +  + R   +  +    +   D      V+      L+    +  
Sbjct: 305 AYSTDGRLVAKLHDAAGASFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSNQ 361

Query: 323 ESMHDLNETDFFEEEEKKNK 342
               DL      +    + K
Sbjct: 362 LLFSDLAPLIGADSNAAQKK 381


>gi|300922348|ref|ZP_07138470.1| AsmA family protein [Escherichia coli MS 182-1]
 gi|300421288|gb|EFK04599.1| AsmA family protein [Escherichia coli MS 182-1]
          Length = 691

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISVAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGCYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|320173083|gb|EFW48302.1| hypothetical protein YhjG [Shigella dysenteriae CDC 74-1112]
          Length = 686

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL   + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLIKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ ++             + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEQLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|299132035|ref|ZP_07025230.1| AsmA family protein [Afipia sp. 1NLS2]
 gi|298592172|gb|EFI52372.1| AsmA family protein [Afipia sp. 1NLS2]
          Length = 659

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 93/279 (33%), Gaps = 17/279 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+ + +  +   VL G      FID    R+  E Q     G ++ V G   + + P 
Sbjct: 6   IRRLALSVAIVLGAVLAGLLASSWFIDRNAVRQAVETQIRDATGLELVVTGKTDVSLFPS 65

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             V    + +    D       + L  R     L++G  RV D+ +  P +   +   G 
Sbjct: 66  ARVVLHGVALKGNADHDAPLSTDQLQARLSLFGLIAGHTRVTDVALHAPRIRVTVDKDGH 125

Query: 122 SNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
           SNW        R        +V    + +  G +   + ++     +  ++L IS    +
Sbjct: 126 SNWAPIVQTFARAVKPAATRDVWFSDVKISDGTLAYRNAKNQANETVGGIDLTISLPSGS 185

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
               L   +   +   +G+             A+F A        +++     P+ +   
Sbjct: 186 RSFSLQGQATWHNEQLDGSFTI----------ADFIAAVGGEKSGLKVKLSGTPLKLSFD 235

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274
           G +  N    +  G  + +    + L      +    +G
Sbjct: 236 GTMT-NRSSLLLDGTLTASTASLRGLTRWAGHELPGSNG 273


>gi|110643771|ref|YP_671501.1| AsmA family protein [Escherichia coli 536]
 gi|110345363|gb|ABG71600.1| AsmA family protein [Escherichia coli 536]
          Length = 691

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTLFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|170723810|ref|YP_001751498.1| AsmA family protein [Pseudomonas putida W619]
 gi|169761813|gb|ACA75129.1| AsmA family protein [Pseudomonas putida W619]
          Length = 688

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 90/311 (28%), Gaps = 35/311 (11%)

Query: 21  FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKD 68
             V    DW   +     + +  + +  A+ G + +H             +P+P    +D
Sbjct: 23  VVVIATFDWNRVKPLLNEKVSEALHRPFAINGNLAVHWRTEPEEGGWRAWVPWPHFIAED 82

Query: 69  IRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126
           + +   E         +E +  R   LPL+  +I +  + + +P  +    + G +NW  
Sbjct: 83  LTLGNPEWLKEPKMVGLERVEFRLAPLPLVFQQIVIPRIDLVKPTASLTRLADGRANWTF 142

Query: 127 -----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                 ++       + +  I    G +   DQ       +    L     F +I+   S
Sbjct: 143 DFGPKDENAQPSKWQLDIGAIGFDQGNVSFDDQTLKTSMKVQIDPLGKPIPFSDIVGKAS 202

Query: 182 IDSIKG----SVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLF 235
            +   G    +   +  G +  +  +           ++ +    +Q         + L 
Sbjct: 203 AEKAGGAQDYAFGLKAQGRYKGQPVSGTGKIGGLLALQDASQPFPLQADVRIADTHVVLA 262

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDG-NVRI 285
           G L              ++G     L                   L+ N   ++G     
Sbjct: 263 GTLTDPRNLGALDLRLRLSGASLGNLYPLTGVTLPDTPAYETDGHLTANLHAAEGATFNY 322

Query: 286 SRYKLQSILPN 296
             +  +    +
Sbjct: 323 QGFNGKIGDSD 333


>gi|300976743|ref|ZP_07173562.1| AsmA family protein [Escherichia coli MS 200-1]
 gi|300308480|gb|EFJ63000.1| AsmA family protein [Escherichia coli MS 200-1]
 gi|324014184|gb|EGB83403.1| AsmA family protein [Escherichia coli MS 60-1]
          Length = 691

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 191 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 250

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 251 GTLFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 310

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 311 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESLQLRLAD 370

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 371 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 413


>gi|110807380|ref|YP_690900.1| hypothetical protein SFV_3564 [Shigella flexneri 5 str. 8401]
 gi|110616928|gb|ABF05595.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
          Length = 686

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 114/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGNLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +    L     F  +         +         +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYIFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEQSVQPAGKVLPYDRFETD 408


>gi|30065194|ref|NP_839365.1| hypothetical protein S4211 [Shigella flexneri 2a str. 2457T]
 gi|56480363|ref|NP_709302.2| hypothetical protein SF3556 [Shigella flexneri 2a str. 301]
 gi|30043456|gb|AAP19176.1| hypothetical protein S4211 [Shigella flexneri 2a str. 2457T]
 gi|56383914|gb|AAN45009.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|313647626|gb|EFS12076.1| asmA family protein [Shigella flexneri 2a str. 2457T]
 gi|332750048|gb|EGJ80460.1| asmA family protein [Shigella flexneri K-671]
 gi|332751126|gb|EGJ81529.1| asmA family protein [Shigella flexneri 2747-71]
 gi|332763473|gb|EGJ93712.1| asmA family protein [Shigella flexneri 2930-71]
 gi|332997555|gb|EGK17171.1| asmA family protein [Shigella flexneri K-218]
 gi|333012431|gb|EGK31812.1| asmA family protein [Shigella flexneri K-304]
          Length = 686

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 114/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGNLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +    L     F  +         +         +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYIFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|77165728|ref|YP_344253.1| hypothetical protein Noc_2265 [Nitrosococcus oceani ATCC 19707]
 gi|254433717|ref|ZP_05047225.1| AsmA family [Nitrosococcus oceani AFC27]
 gi|76884042|gb|ABA58723.1| conserved hypothetical protein, AsmA [Nitrosococcus oceani ATCC
           19707]
 gi|207090050|gb|EDZ67321.1| AsmA family [Nitrosococcus oceani AFC27]
          Length = 812

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/342 (16%), Positives = 123/342 (35%), Gaps = 32/342 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTV----PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           +++ L  L     V+++         P  ID  DF+     Q     G+++ + G IK+ 
Sbjct: 13  MKKFLKILFSTLLVIILLIVIAAVVLPFVIDPNDFKPQITAQVEKATGRELTLGGDIKLS 72

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           + P+  V  K++ +        +  +K+  + +R + +PLL   + +  + ++   LN  
Sbjct: 73  VFPWLGVDVKEVSLSNAPGFGKTPFAKVSDMEVRVKLMPLLEKHLVMDTVVLNGLDLNLA 132

Query: 116 LSSKGVSNWFQRK-----------------STMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
            +++G +NW                      +   +  + +  + ++  RI   D+  D 
Sbjct: 133 RNAQGKTNWADLAAGESQQTPSQEETATEGESPPPLAGIAIAGLKIEAARIDWRDEVKDV 192

Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANF-PAKNKA 216
            Y +  LNL          + + +D    +   +  G+ D   +    + AN    +N  
Sbjct: 193 RYTIKKLNLDTDPLVPGEPTQIKLDFDFVASQPDVHGHLDFGGKVTADMEANHYLLQNTD 252

Query: 217 ISLKIQ-----LFPLAYPIIIDLFGNLFWNE-KQPIYSGVFSVAGDFSKLLNLELSAKKS 270
           + L        +  LA  +  D+   L   +           V G+    L L  S + +
Sbjct: 253 LQLTAAGPALPIEQLALQLNADIDAFLAKQQLTVSDLKLTSQVKGEQEVQLTLNTSLEGN 312

Query: 271 RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312
             +  + ++D  +       Q   P ++T       +  + E
Sbjct: 313 LAAQQYHLNDLQLETQVETPQFPEPINATLAT-TASLDLNGE 353


>gi|238757386|ref|ZP_04618572.1| hypothetical protein yaldo0001_33060 [Yersinia aldovae ATCC 35236]
 gi|238704425|gb|EEP96956.1| hypothetical protein yaldo0001_33060 [Yersinia aldovae ATCC 35236]
          Length = 710

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 48/417 (11%), Positives = 112/417 (26%), Gaps = 75/417 (17%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           +VL G+G    ++LV A    +  DW   +     + +  + +  A++G + +       
Sbjct: 6   KVLAGVGGFIVLLLVAAVIFVMTFDWNRLKPTINEKVSAELQRPFAIRGNLGVDWTRKGD 65

Query: 57  -----HILPFPSVFFKDIRIDQKE-----------------------DGSFESKIEGLSM 88
                  +P+P +  +++ +                                  ++ +  
Sbjct: 66  EPGWRRWVPWPQIHAENLVLGNPTNLVSDTKPNSDKSAKEISESAAFPAGEMVTLQRVDA 125

Query: 89  RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILE 140
               L LL  E+ +  +++ QP+      + G +NW           +++     +V + 
Sbjct: 126 SIALLALLGREVYIPRIWLTQPNAKLLRLANGKNNWTFNLANHPLEGENSSPSSWSVNIN 185

Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS------------ 188
            I    G I + D           ++          ++    D+ KG             
Sbjct: 186 DIVFDRGEINLQDAILKADLHAV-IDPLGKPLPFAEVTGNRSDAKKGKTANLVENPMPDY 244

Query: 189 -VIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
               +  G +  +               +  I   IQ    +    + + G L       
Sbjct: 245 VFGWKVDGKYQGQPLTGSGKIGGMLSMNDADIPFPIQADVRSGSTRVAIAGTLSDPSNLA 304

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQSILP 295
                 + +G     L   +              RL    K + G V     +  +    
Sbjct: 305 GLDLQLTFSGASLDNLYPLIGVLLPATPPYNTDGRLIARLKQAGGAVYHYENFNGKIGDS 364

Query: 296 NSSTDEDNKTK------VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346
           +                  +     L F++       D N+      E  +   + +
Sbjct: 365 DIHGSLTYTASQPRPTLTGKMLSEKLRFADLAPLIGADSNQEKANRGERNRQPGNKV 421


>gi|123444234|ref|YP_001008202.1| hypothetical protein YE4062 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122091195|emb|CAL14078.1| putative exported protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 706

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/425 (11%), Positives = 112/425 (26%), Gaps = 66/425 (15%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           +VL G+  +  ++L+ A       DW   +     + +  + +  A++G + +       
Sbjct: 6   KVLTGIVGVILLLLIAAIVFIKTFDWNRLKPTINEKVSTELQRPFAIRGNLGVDWSRKGD 65

Query: 58  ------ILPFPSVFFKDIRIDQKED-----------------------GSFESKIEGLSM 88
                  +P+P +  +D+ +    D                             ++ +  
Sbjct: 66  EPGWRGWVPWPHIHAEDLVLGNPPDLAGGNTAGKSNNAESTTESTAFPTGEMVTLKRVDA 125

Query: 89  RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR 148
               L LL+ E+ +  +++ QP       + G +NW    +         +    V    
Sbjct: 126 SIAPLALLAKEVWIPRIWLTQPDATLLRLADGKNNWTFNLANSPAGDKSSVSDWSVNIDD 185

Query: 149 IKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS----------------VIAE 192
           I     + +    +   +LQ     L    P +  +   +                   +
Sbjct: 186 IVFDRGQINLKDAVLKADLQAVIDPLGKPLPFAEVTGTRNEKKATEKAQNKAPDFVFGWK 245

Query: 193 GTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250
             G +  +               + +I   +Q    +    + + G L            
Sbjct: 246 IDGKYQGQPLTGSGKIGGMLSMNDASIPFPLQADVRSGSTRVAVAGTLTDPANLAGLDLQ 305

Query: 251 FSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQSILPNSSTD 300
              +G     L   +              RL  + K + G V R   +  +    +   D
Sbjct: 306 LKFSGASLDNLYPLIGVLLPATPPFNTDGRLIASLKQAGGAVYRYENFNGKIGDSDIHGD 365

Query: 301 EDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEE 360
                         L  + +  +            +  ++  N   +       V   E+
Sbjct: 366 LTYTAS---QPRPKLVGNMSSDKLRFADLAPLIGADSNQEKANRGERSRQPSNKVLPTEK 422

Query: 361 KDNSH 365
            D   
Sbjct: 423 FDTKS 427


>gi|191170491|ref|ZP_03032044.1| AsmA family protein [Escherichia coli F11]
 gi|190909299|gb|EDV68885.1| AsmA family protein [Escherichia coli F11]
          Length = 686

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTLFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESLQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|317402391|gb|EFV82963.1| exported protein [Achromobacter xylosoxidans C54]
          Length = 690

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/387 (11%), Positives = 99/387 (25%), Gaps = 40/387 (10%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   R     + +  +G+  A+ G + +              +P+P V   DI +  
Sbjct: 28  TFDWNRARPMINERVSAAIGRPFAINGDLSVEWSRESDEGGWRAWVPWPRVVANDISVAN 87

Query: 74  KEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW--FQRKS 129
            E G     + ++        LPLLS  + +  + + +P  +    + G +NW     +S
Sbjct: 88  TEWGKAPQFATLKRGEFSLSPLPLLSQRVVIRRIQLTEPAADLERLADGRANWVFTLPES 147

Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDL-NLQISARFLNIISPLSIDSIK 186
                  + + +I    GR+ + D   ++D    +  L      A            +  
Sbjct: 148 GEPSPWVLDINEIGFDKGRVGLSDAILQADLTVVVDPLGKPVPFADVAGASFVPEDAAAT 207

Query: 187 GS----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
                    +  G +    +  +         ++      +Q           + G L  
Sbjct: 208 APRDYVFGWKAEGKYKGLATKGEGKVGGMLALQDPRQPFPVQADVTIGGTKAAVAGTLTD 267

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKL 290
                       ++G     L                   L    + + G V     +  
Sbjct: 268 PVNLGALDLRLKLSGGAMAQLYPLTGVTLPDTPPYSTDGHLVAKLRNAGGAVFDYRDFNG 327

Query: 291 QSILPNSSTDEDNKTKVSQ-DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349
           +    +           +       L       +   +           K+    D  KD
Sbjct: 328 RVGGSD----LHGDVSFALSAPRPKLTGKLTSRQLRMEDLGPLIGVPSGKQAPAQDKPKD 383

Query: 350 DIQYSVNKKEEKDNSHDKENQENFSGD 376
                   K     +   +   +   D
Sbjct: 384 APAKRAGGKVLPTQAFRTDRWRDMDAD 410


>gi|117621162|ref|YP_855310.1| AsmA protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117562569|gb|ABK39517.1| AsmA protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 719

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/384 (12%), Positives = 111/384 (28%), Gaps = 60/384 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++++  L  L    +V    +   ID   F+     Q     G+++ ++G I     P 
Sbjct: 1   MKKIIYILLGLALAAVVAIAALVSLIDPNQFKPQLVEQVRKSTGRELVIQGDIGWRFWPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +  + + +            +          LPLLS ++ +  + +   HL     + 
Sbjct: 61  LGLSLEQVALRNPAGFAEPDLVRFTRGEASVGLLPLLSHKLEIGKVTLSGAHLFIQTKAD 120

Query: 120 GVSNWFQ----------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD 157
           G SN                           ++      + L+ + ++     + D  + 
Sbjct: 121 GSSNLSDLLKASAEPKGEATTSEPAATTSPPASDKQPWQISLQGVELQQASALLQDDRNG 180

Query: 158 QVYFLSDLNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKR------------ 201
            V  L  L+L +    ++   P+++ +       +   +G                    
Sbjct: 181 TVSRLEQLDLNLGQLAVDQWVPVTLAAKGAQGELAFDLKGAAQLKLAPDASRSELKDVAL 240

Query: 202 -----------SAFKITANFPAKNKAISLKIQLFPLAYPI-------IIDLFGNLFWNEK 243
                       AF + A+  A  +  SL + L               ++       +E 
Sbjct: 241 AGSLSEPTQRLDAFSLKADRLALGQWSSLTLSLQGAQGAADKPTLAGTLEGTLKARLDEN 300

Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
           + +     +V         L     + +L+G  +   G   ++   L   + ++      
Sbjct: 301 RQLLEMSDAVLAAKLSGDALPRPQMQVKLAGFARAELGKQAVTLSNLVMGVDDA--LLSG 358

Query: 304 KTKVSQDEENLLNFSENGAESMHD 327
              V       + F   G +   D
Sbjct: 359 NGSVQLGAVPRVAFDLKGEKLDLD 382


>gi|281602881|gb|ADA75865.1| predicted outer membrane biogenesis protein [Shigella flexneri
           2002017]
          Length = 674

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 114/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGNLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +    L     F  +         +         +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYIFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|114321841|ref|YP_743524.1| AsmA family protein [Alkalilimnicola ehrlichii MLHE-1]
 gi|114228235|gb|ABI58034.1| AsmA family protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 699

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 48/373 (12%), Positives = 114/373 (30%), Gaps = 66/373 (17%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED 76
           ++    V L +D  D+R+  E       G+ + ++G + + I P+ ++      +   E 
Sbjct: 20  VIALVAVLLLVDPNDYRDRIEAAVEQETGRSLTIEGDLSLSIFPWLALELGRTTLADAEG 79

Query: 77  G--SFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM 133
              +   +++ + +  + +P LL  E+    + +D   +   +  +G  NW         
Sbjct: 80  FHDAPFLEVDQVDVGVQLVPLLLRRELVTRTVVLDGLTVRLMVDEQGRGNWEDLLPEEAD 139

Query: 134 IHN-----------------VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
                                 +  + ++  R+   D++S     +   NL + A  ++ 
Sbjct: 140 PEPAPMPDEPRAPRDLGETLANVGGLDIRNARLSWEDRQSALRLQVDPFNLDLDAVRIDD 199

Query: 177 ISPLSID-------------SIKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAI--- 217
              L +D              +  ++  +GT +    D  R     + +    +      
Sbjct: 200 PMQLQMDWVLTGDDLPRVAGELSSAITVDGTLSHLALDGLRLEVTASGDDLPADGIAASL 259

Query: 218 ----SLKIQLFPLAYP--------IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
                + +    L +P        +  +L       +  P   G   VA    + L   L
Sbjct: 260 RGNPRVDLDAQALDWPDLVLETLGLRAELALQGRQTDTGPEAEGRLQVATFNLRELIARL 319

Query: 266 SAKKSR-----------LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314
                            LSG+ + +D  + ++    +       T  + +  +       
Sbjct: 320 ELDAPDTADPDVLTRVGLSGDLRWADEVLHLTGLDWRL----DDTTLNGEISMHDFAGPG 375

Query: 315 LNFSENGAESMHD 327
             F     E   D
Sbjct: 376 ARFDLAVDEIDLD 388


>gi|327482793|gb|AEA86103.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 740

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 51/414 (12%), Positives = 119/414 (28%), Gaps = 74/414 (17%)

Query: 18  VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-D 76
              F +    D  D++++    A    G ++ +KG I   + P+  +   D  +   +  
Sbjct: 21  AAGFALTHLFDPNDYKDEIRDLARNKAGLELDIKGDIGWSLFPWLGLELHDTTLASAQTP 80

Query: 77  GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF----------- 125
           G   + +  L +    +PLLS E+++ D+ ++  +L      +G  NW            
Sbjct: 81  GQPFADLRMLGLSVRVMPLLSREVQMSDITVNGLNLTLSRDEQGRGNWEGVGQPAGRSEQ 140

Query: 126 ---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
                          +  S       + ++ + V   R+   D ++ Q Y    + L   
Sbjct: 141 AGEPPKAAEPQTEQREEASPARKPLTLDIDSLTVSDARVTYSDAKTGQQYSAESIELTTG 200

Query: 171 ARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAFKI---TANFPAKNKAISL 219
           A       P+ +++  GS           +G   FDN+   ++      +  A  + +  
Sbjct: 201 AIREGSSIPVKLNAFFGSNQPVMRARTELQGALRFDNQLKRYQFEDMRLSGEASGEPLQG 260

Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF---------------------------- 251
           +   F     +++DL   +         +                               
Sbjct: 261 QTLTFSAQGQLLVDLAAQIAEWNSLKFTANQLRGLGELKARDLDKEAKISGAMTVAQFNL 320

Query: 252 ----SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                  G     +    +  ++ L      +  ++ +    L+       +    +  +
Sbjct: 321 REFLQGTGQQLPAMADGNALNRAELVSRLSGTANSLALEELTLKL----DDSTFTGRIAI 376

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361
           S      L     G     D   +   ++E          K+    +V      
Sbjct: 377 SDFARQALRVDLKGDRLNLDRYLSPPSKDEPAGAARKSEVKNTQAAAVGSGSTP 430


>gi|229588118|ref|YP_002870237.1| hypothetical protein PFLU0567 [Pseudomonas fluorescens SBW25]
 gi|229359984|emb|CAY46838.1| putative membrane protein [Pseudomonas fluorescens SBW25]
          Length = 689

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 43/355 (12%), Positives = 96/355 (27%), Gaps = 43/355 (12%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQKE 75
           DW   +     + +  + +  A+ G + +              +P+P V  +D+ +   +
Sbjct: 30  DWNRIKPPLNAKVSEELHRPFAINGNLAVVWAREPDEGGWRAWVPWPHVIAEDLTLGNPD 89

Query: 76  DG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-----K 128
                    ++ + +R   L LL   + +  + + +P       + G +NW  +      
Sbjct: 90  WSKKPHMVTLKKVELRISPLALLVQRVVIPRIDLTEPDAQLQRLADGRANWTFKFDPKDP 149

Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS---- 184
                   V +  I    G + + DQ       +    L     F  I+           
Sbjct: 150 DAEPSNWVVDIGAIGFDKGHVTLDDQTLKTQLDVIIDPLGKPIPFGEIVGDADAKKALEK 209

Query: 185 ----IKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
                  +   +  G +  ++             ++ A    +Q         I L G L
Sbjct: 210 GSAPQDYAFALKVKGQYHGQKLDGSGKIGGLLALQDAAKPFPLQAQVKIADTSIALAGTL 269

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNF-----KISDGNVRISRY 288
                         +AG     L                 G+      + +  + R   +
Sbjct: 270 TDPLNLGALDLRLKLAGSSLGNLYPLTGVTLPDSPAYSTDGHLIAKLHEANGASFRYDNF 329

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSE-NGAESMHDLNETDFFEEEEKKNK 342
             +    +   D      V+      L+ +  +    M DL      +   K+  
Sbjct: 330 NGKIGNSDIHGDL---AYVASQPRPKLSGALVSNQLLMTDLAPLIGADSNAKQKA 381


>gi|152981266|ref|YP_001355333.1| AsmA protein [Janthinobacterium sp. Marseille]
 gi|151281343|gb|ABR89753.1| AsmA protein [Janthinobacterium sp. Marseille]
          Length = 667

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 58/370 (15%), Positives = 118/370 (31%), Gaps = 42/370 (11%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH---------- 57
               +FS +L+      L  DW   +     + +   G+  A+ G + +           
Sbjct: 2   WSAIVFSALLLVCVLFLLMFDWNRAKPWLNERVSEATGRHFAINGDLILTWQRAEPATGT 61

Query: 58  ---ILPFPSVFFKDIRIDQKEDGSF---ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111
               +P P +   D+ +   E        ++I  ++     LPLL+  I +  + +D P+
Sbjct: 62  WRDWIPAPRLSAHDVTLGNPEWAKPDSNMAEIGHITFSVNPLPLLNKTIVIPSLQLDDPN 121

Query: 112 LNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
           L     SKG  NW  ++S       + L++++   G I + D+          +    + 
Sbjct: 122 LALQRVSKGKDNWTFKQSDPSE-WTLDLQRLYFYRGEITLKDE----------VEHIDAK 170

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
             ++ + P +++         GT N        K  A    KN      ++         
Sbjct: 171 ANIDTLEPTAVNDFVMGWKISGTFNGARISGDGKAGALLALKNVDKPFPLEARLNVGKTS 230

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFKISDGN 282
           I + G +   ++         ++G     L         +         L G    + G 
Sbjct: 231 IRVNGTVTKPQELAAIDMRLHLSGASMADLYPLTGITLPKTPEFSTEGHLIGVTNKAGGK 290

Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDE------ENLLNFSENGAESMHDLNETDFFEE 336
               ++K +    + +     + K  +         NLL  S+ G     D NE+     
Sbjct: 291 WTYEKFKGKVGDSDIAGTLVYEAKQPRPLLSGTVVSNLLQLSDLGPVIGADSNESKKERG 350

Query: 337 EEKKNKNDDL 346
                  D +
Sbjct: 351 VAANQPADKV 360


>gi|170740301|ref|YP_001768956.1| hypothetical protein M446_2059 [Methylobacterium sp. 4-46]
 gi|168194575|gb|ACA16522.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
          Length = 1210

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 55/340 (16%), Positives = 100/340 (29%), Gaps = 33/340 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R +L  L  L  VVLV A  VP F++W   R   +   +  +G  +   G ++I +LP 
Sbjct: 1   MRDILTALAGLVIVVLVAALAVPPFVNWEGHRAAVDAAVSRSLGLPVRSDGRLEIRLLPS 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P +    + +     G        +       PLLSGEIR  +  I +  +   +S  G 
Sbjct: 61  PRLRMDHVVLGSP--GRTSLDARYVKAEVALTPLLSGEIRFTETKIGRAEVTVPVSEAGA 118

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                    +    ++ +E + +    +  +   + +                     LS
Sbjct: 119 LVLSPDLGAVLGGRDLAVEDLRIAQLLLTTVVPATGRTDQFY-----------AEAVRLS 167

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
              + G   AEG          F++    P  + A+ +K        P  I++   L   
Sbjct: 168 APRLAGPWRAEGMAG----ALPFRLATGMPLPDGALPVKATAGGETLP-RIEIDARLALV 222

Query: 242 EK-----QPIYSGVFSVA---------GDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
                   P  SG   +             +             L G FK          
Sbjct: 223 GDAVRGLAPEASGTARLTVASPPPAAGPPGAGGAGRHAPVLPFTLQGGFKAKGRVATFDA 282

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
             L+     +      +  +          + +      D
Sbjct: 283 LTLEIDGGGAPLRLGGRGTLEL-PSLKAALALDARRLDLD 321


>gi|170724078|ref|YP_001751766.1| AsmA family protein [Pseudomonas putida W619]
 gi|169762081|gb|ACA75397.1| AsmA family protein [Pseudomonas putida W619]
          Length = 747

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 104/308 (33%), Gaps = 41/308 (13%)

Query: 15  VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ- 73
           +++   F +    D  D++++  + A      ++ + G I   + P+  +   +  I   
Sbjct: 18  IIVALGFALTHLFDPNDYKDEIRQLARDKAHVELTLNGDIGWSLFPWLGLELHEASIATL 77

Query: 74  KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW--------- 124
            +     + ++ L +    LPLL  E+++ D+ ++  +L      +G  NW         
Sbjct: 78  NKPKEPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLTLNRDEQGHGNWEDIGKPLPA 137

Query: 125 ----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
                              + + +    + ++ + V   R+   D ++ Q Y    + L 
Sbjct: 138 QTDPTASAPAPAEQPSAPAEGSSERSVKLDIDSLTVNNARVHYTDAKTGQSYTAESIQLS 197

Query: 169 ISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAFKI---TANFPAKNKAI 217
                     PL   +        +K      G   FD K   +       +     + +
Sbjct: 198 TGPVHEGANIPLKASAFLSASQPNMKARTELAGELRFDRKLKRYNFEDMRLSGETSGEPL 257

Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
           + K   F     +++D+  N+       I +      G     LNL    K  +LSG   
Sbjct: 258 AGKTMTFAAQGQLLVDMAANVASWNGLKISANQLRALG----ELNLRDLDKTPQLSGGLS 313

Query: 278 ISDGNVRI 285
           I+  ++R 
Sbjct: 314 IAQFDLRT 321


>gi|254492627|ref|ZP_05105798.1| AsmA family [Methylophaga thiooxidans DMS010]
 gi|224462148|gb|EEF78426.1| AsmA family [Methylophaga thiooxydans DMS010]
          Length = 820

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 46/388 (11%), Positives = 119/388 (30%), Gaps = 27/388 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R VL  +  +  + +     +P  +D  D++++   Q     G+ + ++G I + + P+
Sbjct: 1   MRTVLKLILIVIIIAVASLVALPFVVDPNDYKDEISSQVEKATGRNLTLQGDIGLSVFPW 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            ++    + +   +       +K+E   +R + +PLL  ++ +  + +D   LN      
Sbjct: 61  IALELGPLSLSNAQGFKADSFAKVEAAEIRIKLMPLLKKQLEMDTVVLDGLVLNLETDKN 120

Query: 120 GVSNWFQRKSTM---------------DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
           G +NW                        +  + +  + +    I   D    + Y L +
Sbjct: 121 GKTNWDDLTQADEVVKEDAKPSQEKSGPALAAISIAGVQLTNANILWSDASKGESYQLRN 180

Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
           LNL          + + +     S   E   +     +      N       ++      
Sbjct: 181 LNLDTDPLTPGEPTAVDMAFDLISAKPEAKAHVTLDTNVMVDMENQQYALTDLAFTTIAE 240

Query: 225 PLAYPI---IIDLFGNLFWNEKQPIYSGV-FSVAGDFSKLLNLELSAKKSRLSGNFKISD 280
               P     I L G++  +  + + +    S+    +       +     ++ N     
Sbjct: 241 GKTLPFAQADIKLNGDIKADMVKQLVNITGLSLTAKVNNDTQTIDANLTGDVNANLASQQ 300

Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKK 340
             V           P+   +     +      + +N               +  E     
Sbjct: 301 TTVDGFELTATIKDPSIPGE-----QADLKLTSNINADLKQQTLTLSALMLELEELMLNA 355

Query: 341 N-KNDDLKKDDIQYSVNKKEEKDNSHDK 367
           + K +++  D   ++ N   +  +    
Sbjct: 356 DIKANNILSDKPGFAGNVHIQPFSLRKL 383


>gi|78484463|ref|YP_390388.1| AsmA [Thiomicrospira crunogena XCL-2]
 gi|78362749|gb|ABB40714.1| AsmA protein [Thiomicrospira crunogena XCL-2]
          Length = 762

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 43/416 (10%), Positives = 129/416 (31%), Gaps = 54/416 (12%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           R+++ L  +  ++++       F+D+  ++   E +     G  + + G I + + PF +
Sbjct: 59  RIVMVLAIIPIILVLAFIGAVNFMDYNQYKPQIESEFQKRTGYALKINGPIDVSVWPF-A 117

Query: 64  VFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKG 120
           +  K + +  +        ++I+ + +      L  +  + +  + +++PHL    ++ G
Sbjct: 118 LEAKQVELKNRPSFNSPNLAQIDSIQVELSLWNLFVNRHLELLGVELEKPHLFLETNAAG 177

Query: 121 VSNW-------------------------------FQRKSTMDMIHNVILEKIHVKGGRI 149
             NW                                        + +  L+   ++   I
Sbjct: 178 QHNWGLLQKQLAMTAQQPQSPHLRKVAYQVVTTPVAAPSDKSPELVDWHLDSFVLQNAII 237

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------- 202
           +  ++++     + D +L       N    +  +    S   +   +F+           
Sbjct: 238 EWQNEQAQTHLAMEDFDLMAFDISPNQSFKVLTNFQYDSSEIKSGFHFNVASMLMVNNRF 297

Query: 203 --------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF--S 252
                      +    P   +   ++++L    + +  D         +     G    S
Sbjct: 298 SQWTLSDWTGNVRLVLPKTMQIPEVRVELVGDLFELNFDQQRFHVEQARFRSLKGSLETS 357

Query: 253 VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312
           ++G + +    +   K   ++         V    +  +++L + S + +      Q   
Sbjct: 358 MSGTYGRNAETQGDLKAIHINLRKWFRHSGVSFPNFVDKTVLRDVSAEFNWSQTPEQFSV 417

Query: 313 NLLNFSENGAESMHDL--NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHD 366
             L    + ++   D+   +     +        +L  D  +  V+ K    +   
Sbjct: 418 ENLAVQLDQSKITGDIWRKQLTEKPQYRFDLAISELNLDRYEAYVDSKNATQSVQK 473


>gi|284007097|emb|CBA72372.1| outer membrane assembly protein [Arsenophonus nasoniae]
          Length = 612

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 50/381 (13%), Positives = 111/381 (29%), Gaps = 32/381 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R L  L  L  V+L G  T+ L ++  DFR     +     G  +  +G ++ H+ P 
Sbjct: 6   MKRFLTTLAILIVVILAGLTTLVLLVNPNDFRHYLIDKVEQKSGYHLVFQGEMRWHVWPS 65

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    I +            + + +     PL+S ++ V  + I    L     S   
Sbjct: 66  LSIITGPISLTAPGATKPAISADNMRLDVSLWPLISHQLSVEQIVISGAVLRSTPDSAAK 125

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            N        + ++++  +            +  S  ++ ++ + L  S     + +   
Sbjct: 126 LNQDD-PIAPEGLNHISRKN-----------NNASKWLFEINKIKLTDSLLIWQLDNDTQ 173

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
           ++     +      +       F    +   ++   SLK  L    YP  I    N    
Sbjct: 174 LNMRNIMLSLS-RQDDHFINVNFSSNVSKDQQDLTFSLKSILNIADYPHQIAGEIN---- 228

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
                    + ++G       +   A    L    +     + +S   +      +    
Sbjct: 229 ------QLEYKMSGINLPTGGISGDATL--LFNYLRDQQPVLTLSNLAINV----NDNHL 276

Query: 302 DNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359
                    +      +    +   D  L      +   +      +    +  + N   
Sbjct: 277 TGNLVAQLGKSPDYQLNIASTKLDLDKILGWQPLLQPLIETKITPQISTKPVIATANTDS 336

Query: 360 EKDNSHDKEN-QENFSGDKMI 379
                  +   Q   S DK+I
Sbjct: 337 YDLGYLKQFPFQATISADKLI 357


>gi|307825391|ref|ZP_07655610.1| AsmA family protein [Methylobacter tundripaludum SV96]
 gi|307733566|gb|EFO04424.1| AsmA family protein [Methylobacter tundripaludum SV96]
          Length = 699

 Score =  126 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 52/371 (14%), Positives = 118/371 (31%), Gaps = 38/371 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           + +L  +  +  +++V A  +P  ID  DF+ +         G+++ + G +K+ + P+ 
Sbjct: 6   KIILSTIAAMILLLIVLACILPFVIDPNDFKPEIAAAVKDKTGRELILDGELKLSLFPWF 65

Query: 63  SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            +    I +           + IE  ++    LPLLS +I V  + +    LN   + +G
Sbjct: 66  GISTGKIALSNAPGFQDRPFATIEESNVTVLLLPLLSKKIEVSRIVLKGLILNLAKNKQG 125

Query: 121 VSNWFQ------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           ++NW                    +           +  + ++  RI   D ++++   L
Sbjct: 126 IANWDDLTTKPVVPAVAVVDKQDEQPIPTATPVMFTIGGMAIENARINWDDLKTEKHIEL 185

Query: 163 SDLNLQISARFLNIISPLSIDSIK--------GSVIAEGTGNFDNKRSAFKIT------- 207
            DLNL       +  + +++             ++        + K   F +        
Sbjct: 186 KDLNLNTDKFTFDEPAGIAVSMTALEAGSTSIQAIKLNTELTVNEKLDTFALRHSDLQVT 245

Query: 208 ---ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE 264
               N P K+   +L I    L           L         +             + +
Sbjct: 246 SSGENVPGKSLTTALTIADAALDMNQQTAKIYGLQLKSGDVTLAAAEMTGTSIKDKPSFQ 305

Query: 265 LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
                +  S    +    + +   +  + L   S + D        +   L  + +  + 
Sbjct: 306 GPVTVAPFSPAKVLQQLAISLPAMQDANALSKLSANFDLTATADSADLQNLGLTLDDTQI 365

Query: 325 MHDLNETDFFE 335
              +N  DF +
Sbjct: 366 KGAINIKDFAQ 376


>gi|121603833|ref|YP_981162.1| AsmA family protein [Polaromonas naphthalenivorans CJ2]
 gi|120592802|gb|ABM36241.1| AsmA family protein [Polaromonas naphthalenivorans CJ2]
          Length = 670

 Score =  126 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 53/378 (14%), Positives = 110/378 (29%), Gaps = 33/378 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR  L GL  L     V    +  F  W   R    R  +  +G++  +   + + +   
Sbjct: 11  LRHWLAGLAILL----VVLVLLLSFFPWDSLRGPINRYVSEQLGRRFEITKHLSVDLGRT 66

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            +V  + + I   E        K          LPL+ G++ +  + + +P +   +   
Sbjct: 67  TTVRAEGVEIANPEWAHDSYLLKATAAEFDINLLPLIFGKVVLPRIKLTEPMIGLQIEPD 126

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           G  +W   + T D      +  + V  G +  + +       +               S 
Sbjct: 127 GRRSWALSRDTSDKSAVPQIGAVVVDQGNVSYLAKAQGADLDV-------------QFSL 173

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITAN---FPAKNKAISLKIQLFPLAYPIIIDLFG 236
                 +  +  +  G + +++      A      ++N   S  +++  +A    +   G
Sbjct: 174 APEAGNELPLSYKAIGQWKHEKFTANGRAGGVLEFSQNTQASFPLEVNAVAGRTSLKAKG 233

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQ 291
           ++            F + G     L   L          +L G     D    +S+ +  
Sbjct: 234 SIANLADLAGIDATFDLQGQNLDDLYNLLGVVLPSTPPYKLRGKLDKKDQLWVVSQIQGL 293

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
               +            Q     L  +      + D  +                KK  +
Sbjct: 294 LGKSD----LGGSLSFDQSSAVPL-LTGKVQSRVMDFADLGAVIGMAPSGALAP-KKQAV 347

Query: 352 QYSVNKKEEKDNSHDKEN 369
             S  KK  + NS  K +
Sbjct: 348 AASNIKKPAQANSSSKAS 365


>gi|300114676|ref|YP_003761251.1| AsmA family protein [Nitrosococcus watsonii C-113]
 gi|299540613|gb|ADJ28930.1| AsmA family protein [Nitrosococcus watsonii C-113]
          Length = 798

 Score =  126 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 55/390 (14%), Positives = 125/390 (32%), Gaps = 27/390 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTV----PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           +++ L  L     VV++         P  ID  DF+     Q     G+++ + G IK+ 
Sbjct: 1   MKKFLKILFSTLLVVILLIVIAAVVLPFVIDPNDFKPQITAQVEKATGRELTLGGDIKLS 60

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           + P+  V  KD+ +        +  +K+  + +R + +PLL  ++ +  + ++   LN  
Sbjct: 61  VFPWLGVDLKDVSLSNAPGFGKAPFAKVSDMEVRVKLIPLLEKQLVMDTVVLNGLDLNLA 120

Query: 116 LSSKGVSNW-----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
            +++G +NW                      +   +  + +  + ++  RI   D+  D 
Sbjct: 121 RNAQGKTNWADLAAGESQQISSEEETAPEGESPPPLAGIAIAGLKIEAARIDWRDEVKDV 180

Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218
            Y +  LNL          + + +D    +   +  G+ D                +   
Sbjct: 181 RYTIKKLNLDTDPLVPGEPTQIKLDFDFAASQPDVHGHLDLSGKVTADMEANHYLLQNTD 240

Query: 219 LKIQLFPLAYP---IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
           LK+     A P   + + L  ++     +   +          K          + L GN
Sbjct: 241 LKLTAAGPALPIEQLALQLNADIDAFLAKQQLTVSDLKFTSQVKGEQEVQLTLNTSLEGN 300

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNK-TKVSQDEENLLNFSENGAESMHDLNETDFF 334
                  +   + + Q   P      +      +  + N    +           +    
Sbjct: 301 LAAQQYRLNNLQVETQVATPQFPEPINATLATTASLDLNRETLTLQDLSLATLGIKLKGQ 360

Query: 335 EEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364
            +  K   +  LK   +  + N +   +  
Sbjct: 361 IKGAKILTDPKLKGQLVSNAFNPRRAAETL 390


>gi|163744235|ref|ZP_02151595.1| AsmA family protein [Oceanibulbus indolifex HEL-45]
 gi|161381053|gb|EDQ05462.1| AsmA family protein [Oceanibulbus indolifex HEL-45]
          Length = 645

 Score =  126 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 39/358 (10%), Positives = 99/358 (27%), Gaps = 25/358 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R ++ G+G L  +++V        +           Q + + G+++++ G + +   P 
Sbjct: 1   MRWIIRGIGALL-LIVVIMLGALFLLPGERIARIASDQLSRMTGREVSITGDVGVTFWPV 59

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V    + +   +             ++  +   LL GEIR+ ++    P +       
Sbjct: 60  LGVTAGGLEVGNADWTDKGAMLTAANAAIGVDAGALLRGEIRITNIAAQSPVIRLEQRRD 119

Query: 120 GVSNWFQ-----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
           G ++W                       + ++K+ V    +   D E   V     ++L 
Sbjct: 120 GRASWQFTDSASGARIETESEPTASRRPLSIQKLTVTDATLIY-DAEGADVLRYEGVDLA 178

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
           +        + ++          + T   D      +        + A       F    
Sbjct: 179 LDWPEQGGAADITASMAPAGEAVQLTARIDGFADFLEGGVQPLRADVATRGGEISFDGRG 238

Query: 229 PIIIDLFGNLFWN-EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS-DGNVRIS 286
            +   L G+L  +      +   F   G            +   L G   ++ D  + + 
Sbjct: 239 SLNGALAGDLRIDSADTARFLASFGAGGVTLP----RGLGQSVDLRGGLTLTADRRLALR 294

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344
              L             +  ++ +    +  +             +  E     +   
Sbjct: 295 NIALDLG----GNSLTGQADLALNGTPRITANLRTGALDLSALSDEATETGSNGSPTA 348


>gi|332557438|ref|ZP_08411760.1| AsmA family protein [Rhodobacter sphaeroides WS8N]
 gi|332275150|gb|EGJ20465.1| AsmA family protein [Rhodobacter sphaeroides WS8N]
          Length = 660

 Score =  126 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 105/346 (30%), Gaps = 25/346 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R ++     LF +         + I      E   R+     G+ + + G ++  I P 
Sbjct: 1   MRWLVRLAAVLFGLA-ALFLVALVLIPRERVAELAAREFEAATGRDLTISGDVRPSIWPR 59

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V    + +            +   L +  + L L+SG  R+  + +++P +     ++
Sbjct: 60  LGVRTGPVTVANAPWTDEGPMLEARSLEIGLDTLALMSGAWRISRIALEEPVIRLERDAE 119

Query: 120 GVSNWFQRKST-------------------MDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           G +NW                                 L++  V GGR+  ID+ +    
Sbjct: 120 GRANWDLSSPPRGAEGRAAEGRASPAPASAQAGFPLFSLDEGLVTGGRVLWIDRAAGTRT 179

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            +S L+L++S       + L++            G      ++       P +   ++  
Sbjct: 180 EISGLDLRVSLPEAGGPADLTLSGQANGHGFAVEGRLAEAGTSLAGRVA-PVRLSLVTGA 238

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280
            ++                 +        + ++ G     L   L  ++  L+G   +++
Sbjct: 239 ARIGFDGEAGSAPPMAEGTIDAALGDLGDLAALFGQDRPTLPEGLGRRQIALTGGLTLAE 298

Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
           G       +   +  + +        + Q E   L  +        
Sbjct: 299 GG--TLHLRNGQVTADGNRLAVEADLIPQGERPKLEANLRAETLNL 342


>gi|28872021|ref|NP_794640.1| hypothetical protein PSPTO_4907 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28855274|gb|AAO58335.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 688

 Score =  126 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 43/381 (11%), Positives = 100/381 (26%), Gaps = 45/381 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    +VL     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIFAWTGTTLLLVLAVLVIVIVTFDWNRIKPTLNEKVSEALHRPFAINGDLDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   +         ++ +  R   LPLL  ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLTLGNPDWSKTPQMVNLKHVEFRLSLLPLLVQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       + +  I    G +   DQ  +    + 
Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVIDIGAIKFDKGLVSFNDQTLNANLDVV 184

Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212
            +++       + I                   +      G +  ++ +           
Sbjct: 185 -IDMLGKPIPFSEIVGSKEAQKAQEKGSVPQDYAFGLAVKGQYHGQKLSGTGKIGGLLAL 243

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270
           K+ +    +Q           + G L   +          ++G     L           
Sbjct: 244 KDASQPFPVQADVKIGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303

Query: 271 -------RLSGNF-KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321
                  RL       +  N R   +  +    +   D      V+      L+    + 
Sbjct: 304 PAYSTDGRLVAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSN 360

Query: 322 AESMHDLNETDFFEEEEKKNK 342
                DL      +    + K
Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381


>gi|325273135|ref|ZP_08139432.1| AsmA family protein [Pseudomonas sp. TJI-51]
 gi|324101740|gb|EGB99289.1| AsmA family protein [Pseudomonas sp. TJI-51]
          Length = 748

 Score =  126 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 50/352 (14%), Positives = 108/352 (30%), Gaps = 46/352 (13%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KE 75
           +   F +    D  D++++  + A      ++ + G I   + P+  +   +  I    +
Sbjct: 20  VALGFALTHLFDPNDYKDEIRQLARDKAHVELTLNGDIGWSLFPWLGLELHEASIATLAK 79

Query: 76  DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------- 124
                + ++ L +    LPLL  E+++ D+ ++  +L      +G  NW           
Sbjct: 80  PKEPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLTLARDEQGHGNWEDIGKPLPAQP 139

Query: 125 ---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
                                 +    + ++ + V   R++  D ++ Q Y    + L  
Sbjct: 140 GTATDAPAQAPSEQKPAAADGNERPVKLDIDSLTVNNARVQYTDAKTGQSYSAESIQLST 199

Query: 170 SARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAFKI---TANFPAKNKAIS 218
                    PL   +        IK      G   FD K   +       +     +   
Sbjct: 200 GPVHEGANIPLKASAFVSANQPNIKARTELAGELRFDRKLKRYNFEDMRLSGETSGEPTG 259

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278
            K   F     +++D+  N+       + +      G     LNL    K  +LSG   I
Sbjct: 260 GKTVAFVAQGQLLVDMAANVASWNGLKVSANQLRALG----ELNLRDLDKTPQLSGGLSI 315

Query: 279 SDGNVR-ISRYKLQSILPNSSTDEDNKTKV--SQDEENLLNFSENGAESMHD 327
           +  ++R         +   +      K ++          + S +      D
Sbjct: 316 AQFDLRTFLDGIGHPLPATNDPAAFGKLELVTRLQGTPS-SLSLDDLAVKLD 366


>gi|317046369|ref|YP_004114017.1| AsmA family protein [Pantoea sp. At-9b]
 gi|316947986|gb|ADU67461.1| AsmA family protein [Pantoea sp. At-9b]
          Length = 686

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 47/413 (11%), Positives = 117/413 (28%), Gaps = 44/413 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           +VL  +  +F +++V    V    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KVLSWVIGIFLLLVVVIVVVIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVAWVRNRD 65

Query: 57  -----HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V   DI +             ++ +      L LL  ++ +  + + +
Sbjct: 66  EPGWRSWVPWPQVHADDIMLGNPPTIPDVTMVHLQRVEATLAPLALLHKQVYLPWIKLQR 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P      ++   +NW            +      +  L+ I    G+++  D  +     
Sbjct: 126 PDARLVQTADKHNNWTFNLASSSNGEANAAPSAWSFRLDNILFDQGQVRYRDAINQADVS 185

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVI--AEGTGNFDNKRSAFKITAN--FPAKNKAI 217
           ++   L     +  +          G  +   + +G ++N+R   +         +++  
Sbjct: 186 VTINPLGKPVPYTQVAGGDDQQQGAGDFVFGWQASGTYNNQRLDGEGKIGGMLSLRSQTT 245

Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS------- 270
              +Q+        + + G L               +GD    L                
Sbjct: 246 PFPLQVDVRNGTTRVRVDGTLQDPLNLGGLDVRLRFSGDTLANLYGLTGVLLPDTPPYET 305

Query: 271 --RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES-M 325
              L   F    G + R  ++       +            Q      L    +  +  M
Sbjct: 306 DGHLIARFNDEKGALFRYEKFNGHIGDSD----IHGSLVYRQGKPRPSLTGDLSSNQLRM 361

Query: 326 HDLNETDFFEEEEKKNKN--DDLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376
            DL         +   K      ++         +    +  D ++      D
Sbjct: 362 ADLGPLIGVNSGKGSEKTQQAKAQRGAASTQPADRVLPHDKFDTKSWGAMDAD 414


>gi|238793269|ref|ZP_04636896.1| hypothetical protein yinte0001_37020 [Yersinia intermedia ATCC
           29909]
 gi|238727437|gb|EEQ18964.1| hypothetical protein yinte0001_37020 [Yersinia intermedia ATCC
           29909]
          Length = 704

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 45/410 (10%), Positives = 116/410 (28%), Gaps = 67/410 (16%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           +VL  +G L  ++L       +  DW   +     + +  + +  A++G + +       
Sbjct: 6   KVLTAIGGLIVLLLAATVIFVMTFDWNRLKPTINDKVSAELQRPFAIRGNLGVDWSRQGD 65

Query: 58  ------ILPFPSVFFKDIRIDQKED------------------GSFESKIEGLSMRAEFL 93
                  +P+P ++ +D+ +    D                        ++ +      L
Sbjct: 66  EPGWRGWVPWPHIYAEDLVLGNPPDLVSDKTDNKDNPPATDFPAGEMVTLKRIDASIAPL 125

Query: 94  PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------FQRKSTMDMIHNVILEKIHVKG 146
            LL+  + +  +++ QP       + G +NW         +        +V ++ I    
Sbjct: 126 ALLAQRVWIPRIWLTQPDAKLLRLANGNNNWTFNLANSPVQGEAPPSAWSVNIDDIVFDR 185

Query: 147 GRIKIIDQE-SDQVYFLSD-------LNLQISARFLNIISPLSIDSIKGS----VIAEGT 194
           G I + D     +++ + D              R      P++  +   +       +  
Sbjct: 186 GEISLSDATLKAELHAVIDPLGKPLPFAEVTGKRNEKKDKPVTDKAQSNTPDYVFGWKID 245

Query: 195 GNFDNKRSAFKITANFPA--KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS 252
           G +  +  +            + ++   +Q    +    + + G L              
Sbjct: 246 GKYQGQPLSGSGKIGGMLSMSDASVPFPLQADVRSGSTRVAVVGTLTDPGNLAGLDLQLK 305

Query: 253 VAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQSILPNSSTDED 302
            +G     L   +              RL  + K + G V     +  +    + +    
Sbjct: 306 FSGTSLDNLYPLIGVLLPATPPYNTDGRLIASLKQTGGAVYHYQNFNGKIGDSDINGSLT 365

Query: 303 NKTK------VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346
                       +     L F++       D N+      E  +   + +
Sbjct: 366 YTASQPRPKLTGKMSSEKLRFTDLAPLIGADSNQEKANRGERNRQPANKV 415


>gi|121998114|ref|YP_001002901.1| AsmA family protein [Halorhodospira halophila SL1]
 gi|121589519|gb|ABM62099.1| AsmA family protein [Halorhodospira halophila SL1]
          Length = 696

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 48/337 (14%), Positives = 108/337 (32%), Gaps = 42/337 (12%)

Query: 18  VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED- 76
           V    V   ID  D+R+D    A   +G+++ ++G I+    P+  +    + +   E  
Sbjct: 21  VAIAVVATVIDPNDYRDDLAELAERELGRELEIEGEIEWSFFPWLGIEIGRVTLADAEGY 80

Query: 77  -GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF---------- 125
                 +I+ LS   +  PLL GE+    + +++P +       G  NW           
Sbjct: 81  YDEPFVEIDRLSAAVQVWPLLRGELHTRAVELERPIVRLMRDEDGRDNWADLAERFAAAE 140

Query: 126 --------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
                                  + ++ +  +++  + +  G +   D+  D+   L  L
Sbjct: 141 DEHEDDTAAQESADSESPAQDSPADLEALGGIVIGGLRLHEGAVYWEDRSEDRQIQLDPL 200

Query: 166 NLQISARFLNIISPLSIDSIKG---SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
           NL++    L+    +  D + G    V   G        +  +I A++          +Q
Sbjct: 201 NLEVDTLRLDEPVGVRADVLVGDEERVAFSGEARLSQTDAGPEIAASWTLDPLDPKGLLQ 260

Query: 223 LFPLAYPIIID------LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF 276
                 P   D      L G+   +           +       +  + + +  + +  F
Sbjct: 261 ALGEEPPETTDPEVMRSLSGSGTIDATAERIDVTRLILDLDDSRVEAQAAIEPEQPTIEF 320

Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313
                 + +  Y L         + +   + +   +N
Sbjct: 321 AAQLDRIDLDGY-LPPEAAEGEANGNGNGETATANDN 356


>gi|238797061|ref|ZP_04640564.1| hypothetical protein ymoll0001_2250 [Yersinia mollaretii ATCC
           43969]
 gi|238719106|gb|EEQ10919.1| hypothetical protein ymoll0001_2250 [Yersinia mollaretii ATCC
           43969]
          Length = 707

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 49/426 (11%), Positives = 118/426 (27%), Gaps = 67/426 (15%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           +VL G+G +  ++LV A    +  DW   +     + +  + +  A++G + +       
Sbjct: 6   KVLTGIGGVILLLLVVAIVFIMTFDWNRLKPTINDKVSAELQRPFAIRGNLGVDWSRKGD 65

Query: 58  ------ILPFPSVFFKDIRIDQKE----------------------DGSFESKIEGLSMR 89
                  +P+P +  +D+ +                                 ++ +   
Sbjct: 66  EPGWRGWVPWPHIHAEDLVLGNPPELVSDKSTDDKNVDDKTASTAFPAGEMVTLKRVDAS 125

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW------FQRKSTMDMIHNVILEKIH 143
              L LL+ E+ +  +++ QP  N    + G +NW        ++       +V ++ I 
Sbjct: 126 IAPLALLAKEVWIPRIWLTQPDANLRRLANGNNNWTFNLANSPKEGEQPSSWSVNIDDIV 185

Query: 144 VKGGRIKIIDQ--ESDQVYFLSDL-------NLQISARFLNIISPLSIDSIKGS---VIA 191
              G I++ D   ++D    +  L        +  +       SP        +      
Sbjct: 186 FDRGEIRLNDAILKADLRAVIDPLGKPLPFAEVTGARNEKKGQSPADSAQSNTADYVFGW 245

Query: 192 EGTGNFDNKRSAFKITANFPA--KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
           +  G +  +               + +    +Q    +    + + G L           
Sbjct: 246 KIDGKYQGQPLVGSGKIGGMLSMSDASRPFPLQADLRSGSTRVAVAGTLTDPGNLAGLDM 305

Query: 250 VFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQSILPNSST 299
               +G     L   +              RL  + K + G V     +  +    +   
Sbjct: 306 QLKFSGASLDNLYPLIGVLLPSTPPYNTDGRLVASLKQAGGAVYHYENFNGKIGDSDIRG 365

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359
           +              L  + +  +            +  ++      K       V   E
Sbjct: 366 NLTYTAS---QPRPKLTGNMSSEKLRFADLAPLIGADSNQEKARRGEKNRQPANKVLPDE 422

Query: 360 EKDNSH 365
           + D   
Sbjct: 423 KFDTQS 428


>gi|126461487|ref|YP_001042601.1| AsmA family protein [Rhodobacter sphaeroides ATCC 17029]
 gi|126103151|gb|ABN75829.1| AsmA family protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 660

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 105/346 (30%), Gaps = 25/346 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R ++     LF +         + I      E   R+     G+ + + G ++  I P 
Sbjct: 1   MRWLVRLAAVLFGLA-ALFLVALVLIPRERVAELAAREFEAATGRDLTISGDVRPSIWPR 59

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V    + +            +   L +  + L L+SG  R+  + +++P +     ++
Sbjct: 60  LGVRTGPVTVANAPWTDEGPMLEARSLEIGLDTLALMSGAWRISRIALEEPVIRLERDAE 119

Query: 120 GVSNWFQRKST-------------------MDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           G +NW                                 L++  V GGR+  ID+ +    
Sbjct: 120 GRANWDLSSPPRGAEGRAAEGRASPAPASAQAGFPLFSLDEGLVTGGRVLWIDRAAGTRT 179

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            +S L+L++S       + L++            G      ++       P +   ++  
Sbjct: 180 EISGLDLRVSLPEAGGPADLTLSGQANGHGFAVEGRLAEAGTSLAGRVA-PVRLSLVTGA 238

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280
            ++                 +        + ++ G     L   L  ++  L+G   +++
Sbjct: 239 ARIGFDGEAGSAPPMAEGTIDAALGDLGDLAALFGQDRPALPEGLGRRQIALTGGLTLAE 298

Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
           G       +   +  + +        + Q E   L  +        
Sbjct: 299 GG--TLHLRNGQVTADGNRLAVEADLIPQGERPKLEANLRAETLNL 342


>gi|89053507|ref|YP_508958.1| AsmA [Jannaschia sp. CCS1]
 gi|88863056|gb|ABD53933.1| AsmA [Jannaschia sp. CCS1]
          Length = 656

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/332 (12%), Positives = 110/332 (33%), Gaps = 14/332 (4%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R +   +G +  +  +      L I      +    + T   G+ + + G  +  + P 
Sbjct: 1   MRWIFRVIGAVIVLFFLA-LGTVLLIPAERIAQVASDRITAATGRTVTISGEARPTLWPD 59

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +  + +R+        +   +   +++   +  LLSG+IRV     +   +    ++ 
Sbjct: 60  LGIVIEGLRVGNPAWAGHAPMIEAARVNVGVAWNGLLSGDIRVERAVFEGAQITLVRAAD 119

Query: 120 GVSNWFQ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
           G+++W      +        +  ++  +   R+  +D+E+   + ++ LN  +       
Sbjct: 120 GLTSWDMGGGGEEATGAPVQIGFDEAVIVEARVHYLDEEAGADWDVTQLNATMRLPEAGG 179

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
              +   +    V  E     D   +     A     N  +  +         + +D   
Sbjct: 180 AVAIEGTAQVNGVPLELETTIDGVAALLAGEARPLQAN--LRWQGGSAAFDGALGLDATA 237

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI-SDGNVRISRYKLQSILP 295
               +        + ++ G     L   L   +  ++G+ ++  +G+V +    L+    
Sbjct: 238 QGALDLTAEDLGPLVALTGGAMPDLPHGLGRDRIAVTGDVRLAQEGSVHLREGVLRL--- 294

Query: 296 NSSTDEDNKTKVSQDEE-NLLNFSENGAESMH 326
              T       +   E+  +L  +  G +   
Sbjct: 295 -DETVLSVAADLLPGEDRPMLRGTVTGGDIAL 325


>gi|304415341|ref|ZP_07396020.1| putative assembly protein [Candidatus Regiella insecticola LSR1]
 gi|304282804|gb|EFL91288.1| putative assembly protein [Candidatus Regiella insecticola LSR1]
          Length = 608

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/382 (11%), Positives = 117/382 (30%), Gaps = 53/382 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R++L  L  L ++ +    T+ L ++  DFR +  +Q    +G ++   G ++ H+   
Sbjct: 26  MRKLLTILIILLTMSVSCMATLVLLVNPNDFRAEMVKQVKKKMGYQLHFDGNLRWHVGAQ 85

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    I +            E + +  +  PLL   + + ++ +    +N    SK  
Sbjct: 86  LSIIAGRITLTSLGAEIPVVSAENIRLDVKLWPLLFQRLEIKEVMLKAAVINLIPESKSK 145

Query: 122 SNWFQRKS--TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
                       D    + + +I +    + I  Q +++   + +LNL ++    +    
Sbjct: 146 ETTAASNHFANADFGWELDISRIKLVD-SLLIWQQVNNEQINIRNLNLDLTKNNHH---- 200

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
                                +       N   ++   SL   L    YP  ++   N  
Sbjct: 201 --------------------VKVLLSSQVNRNQRDLIFSLAADLDLQHYPQTVNANVN-- 238

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
                      + + G    +  +     K  +  +++ +   V +    + +    +  
Sbjct: 239 --------QLSYRLEGADIPVAGIS---GKGSMQASYQSASRTVMLKEIDITA----NDN 283

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHD-LNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358
             +   +    +      +        D L E+   +   ++     +    I +     
Sbjct: 284 TFEGNAQAELGDIPHYLINLTAQNINLDTLLESQSSKNHRQEKAKQPVTAPVIAFQKQSH 343

Query: 359 EEKDNSHDKENQENFSGDKMIL 380
                        +F+    ++
Sbjct: 344 --------LRPLRDFNARVTLM 357


>gi|301383724|ref|ZP_07232142.1| hypothetical protein PsyrptM_13868 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302059300|ref|ZP_07250841.1| hypothetical protein PsyrptK_04872 [Pseudomonas syringae pv. tomato
           K40]
 gi|302131573|ref|ZP_07257563.1| hypothetical protein PsyrptN_09282 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
          Length = 688

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/381 (11%), Positives = 100/381 (26%), Gaps = 45/381 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    +VL     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIFAWTGTTLLLVLAVLVIVIVTFDWNRIKPTLNEKVSEALQRPFAINGDLDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   +         ++ +  R   LPLL  ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLTLGNPDWSKTPQMVNLKHVEFRLSLLPLLVQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       + +  I    G +   DQ  +    + 
Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVIDIGAIKFDKGLVSFNDQTLNANLDVV 184

Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212
            +++       + I                   +      G +  ++ +           
Sbjct: 185 -IDMLGKPIPFSEIVGSKEAQKAQEKGSVPQDYAFGLAVKGQYHGQKLSGTGKIGGLLAL 243

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270
           K+ +    +Q           + G L   +          ++G     L           
Sbjct: 244 KDASQPFPVQADVKIGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303

Query: 271 -------RLSGNF-KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321
                  RL       +  N R   +  +    +   D      V+      L+    + 
Sbjct: 304 PAYSTDGRLVAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSN 360

Query: 322 AESMHDLNETDFFEEEEKKNK 342
                DL      +    + K
Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381


>gi|330873746|gb|EGH07895.1| hypothetical protein PSYMP_04700 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 688

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/381 (11%), Positives = 100/381 (26%), Gaps = 45/381 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    +VL     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIFAWTGTTLLLVLAVLVIVIITFDWNRIKPTLNEKVSEALHRPFAINGDLDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   +         ++ +  R   LPLL  ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLTLGNPDWSKTPQMVNLKHVEFRLSLLPLLVQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       + +  I    G +   DQ  +    + 
Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVIDIGAIKFDKGLVSFNDQTLNANLDVV 184

Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212
            +++       + I                   +      G +  ++ +           
Sbjct: 185 -IDMLGKPIPFSEIVGSKEAQKAQEKGSVPQDYAFGLAVKGQYHGQKLSGTGKIGGLLAL 243

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270
           K+ +    +Q           + G L   +          ++G     L           
Sbjct: 244 KDASQPFPVQADVKIGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303

Query: 271 -------RLSGNF-KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321
                  RL       +  N R   +  +    +   D      ++      L+    + 
Sbjct: 304 PAYSTDGRLVAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYIASQPRPKLSGVLVSN 360

Query: 322 AESMHDLNETDFFEEEEKKNK 342
                DL      +    + K
Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381


>gi|312883694|ref|ZP_07743418.1| AsmA protein [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368667|gb|EFP96195.1| AsmA protein [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 727

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/435 (12%), Positives = 132/435 (30%), Gaps = 69/435 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L+ LG +   + +    +   +D   F+     Q     G  + V G I+    P 
Sbjct: 1   MKKLLLVLGIVILTISIALLALVTLVDPNQFKPLLVEQVKKNTGLDLVVDGDIQWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                    +   ++       K++ + +    +PLL  ++ + ++ +    L+      
Sbjct: 61  LGFSLGKTELRNPDEFENQNLFKVDTIGIDVSVIPLLQKKLEIGNVNLSGAELHIETLKD 120

Query: 120 GVSNWFQRKSTMD----------------------------------MIHNVILEKIHVK 145
           G  N                                              ++ L  I V 
Sbjct: 121 GKRNIDVLSQKSSVTEQQTVSSSAQSTAPQSDNVSSSKDGSGTGLSTDDWSINLAGITVS 180

Query: 146 GGRIKIIDQESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201
              ++I D+++     L D++ Q+S     ++  I   +   + +     +G   F  ++
Sbjct: 181 DTSVEIQDRKAGTYTKLYDVSFQLSEFAFDQWTKIDFAMKGQNNQQKFATQGRAEFKLQQ 240

Query: 202 SAFK-----------------------ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
                                      I  +  A  KA SL  ++   A  + +DL G+ 
Sbjct: 241 DLVSYTLRDIELDASLSDPQTKIERAVIGLDTFAFGKANSLTYEVVGQASGLDLDLKGSS 300

Query: 239 FWNEKQPIYSGVFS--VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
                  +   +          +  +L  S     +            +S + L+ +  N
Sbjct: 301 TLTIDPEMTKLLMGPLKLKATLQGASLPQSPMNIDMDSTLSFDITQKHLS-FVLKKLAAN 359

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356
                D KT  +  +   + FS +      D  E         +  +D++  +      +
Sbjct: 360 D-LLFDGKTDATLSDIPKIRFSLHSPNIDLD--EFLGLSRSVNEPSHDEVASETPTAPKS 416

Query: 357 KKEEKDNSHDKENQE 371
            + + + S  +++ E
Sbjct: 417 SQSKPEQSQPEQSDE 431


>gi|330505504|ref|YP_004382373.1| AsmA family protein [Pseudomonas mendocina NK-01]
 gi|328919790|gb|AEB60621.1| AsmA family protein [Pseudomonas mendocina NK-01]
          Length = 741

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/396 (11%), Positives = 120/396 (30%), Gaps = 68/396 (17%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFE 80
            +    D  D++++  + A       + +KG I   + P+  +   D  +   +      
Sbjct: 25  ALTHLFDPNDYKDEIRQIAHDKANLDLQLKGDIGWSLFPWLGLELTDATLASADTPDKPF 84

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------------- 125
           + +  + +    +PLL  E+++ D+ +D  +LN     KG  NW                
Sbjct: 85  ADLRMIGLSVRVMPLLRKEVQMSDIRVDGLNLNLQRDDKGHGNWEGVGRPAQASTTQPAP 144

Query: 126 -------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                          +        + ++ + +   R+   D +  Q + + ++ L+  A 
Sbjct: 145 SEPAPSGDTPPSQPSEKPAGQPLKLDIDSLTLSNSRVDYSDAQKGQQFTVENIELKTGAI 204

Query: 173 FLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF---KITANFPAKNKAISLKI 221
                 P+   +        ++     EG   FD     +    +  +  A  + +  K 
Sbjct: 205 REGASIPVKFSAFFGTNQPVLRARSEVEGQLRFDRALKRYQFEDLKLSGEASGEPLKGKT 264

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS-----KLLNLELSAKKSRLSGNF 276
             F     +++D   N+       + +      G+       +   +      + L+   
Sbjct: 265 LNFSAQGQLLLDQAANIAEWNGLKLSANQMRALGEIKARELGEDAKISGGLSIASLNLRE 324

Query: 277 KISDGNVRIS---------RYKL--------------QSILPNSSTDEDNKTKVSQDEEN 313
            +    V++          +++L              +  L    +    K  V+   + 
Sbjct: 325 FLDGIGVQLPAMQAGDALNQFELVSRLNGSSKGMMFEELNLKLDGSTFTGKLGVADVSKQ 384

Query: 314 LLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349
            L     G +   D       ++     +  ++K+ 
Sbjct: 385 ALRVDLKGDKLDLDRYLPPKAKDSAAAARKAEVKES 420


>gi|332163400|ref|YP_004299977.1| hypothetical protein YE105_C3780 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667630|gb|ADZ44274.1| hypothetical protein YE105_C3780 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862177|emb|CBX72340.1| uncharacterized protein yhjG [Yersinia enterocolitica W22703]
          Length = 713

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/432 (11%), Positives = 116/432 (26%), Gaps = 73/432 (16%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           +VL G+  +  ++L+ A       DW   +     + +  + +  A++G + +       
Sbjct: 6   KVLTGIVGVILLLLIAAIVFIKTFDWNRLKPTINEKVSTELQRPFAIRGNLGVDWSRKGD 65

Query: 58  ------ILPFPSVFFKDIRIDQKED------------------------------GSFES 81
                  +P+P +  +D+ +    D                                   
Sbjct: 66  EPGWRGWVPWPHIHAEDLVLGNPPDLVGGNAAGKNNNVVGKSNNAESKTESTAFPTGEMV 125

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------FQRKSTMDMI 134
            ++ +      L LL+ E+ +  +++ QP       + G +NW            +    
Sbjct: 126 TLKRVDASIAPLALLAKEVWIPRIWLTQPDATLLRLADGKNNWTFNLANSPAGDESSASD 185

Query: 135 HNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDL-------NLQISARFLNIISPLSIDSI 185
            +V ++ I    G+I + D   ++D    +  L        +  +             + 
Sbjct: 186 WSVNIDDIVFDRGQINLKDAVLKADLQAVIDPLGKPLPFAEVTGARNEKKATEKAQNKAP 245

Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243
                 +  G +  +               + +I   +Q    +    + + G L     
Sbjct: 246 DFVFGWKIDGKYQGQPLTGSGKIGGMLSMNDASIPFPLQADVRSGSTRVAVAGTLTDPAN 305

Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQSI 293
                     +G     L   +              RL  + K + G V R   +  +  
Sbjct: 306 LAGLDLQLKFSGASLDNLYPLIGVLLPATPPFNTDGRLIASLKQAGGAVYRYENFNGKIG 365

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353
             +   D              L  + +  +            +  ++  N   +      
Sbjct: 366 DSDIHGDLTYTAS---QPRPKLVGNMSSDKLRFADLAPLIGADSNQEKANRGERSRQPSN 422

Query: 354 SVNKKEEKDNSH 365
            V   E+ D   
Sbjct: 423 KVLPTEKFDTKS 434


>gi|296105254|ref|YP_003615400.1| AsmA family protein [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295059713|gb|ADF64451.1| AsmA family protein [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 680

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/385 (12%), Positives = 104/385 (27%), Gaps = 43/385 (11%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           RV+     +F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   RVISWTAGIFLLLIVVAIIIIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKE 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V   DI +    D        +  +      L LL+  + +  + + Q
Sbjct: 66  ETGWRSWIPWPHVHADDIVLGNPPDIPAVTMVHLPRVEATLAPLALLTKTVYLPWIKLQQ 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLASSGEKDPNAQPSSWSFRLDNILFDRGRIAIDDKVSKADVE 185

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +    L     F  +    +      +         TG ++ +              ++ 
Sbjct: 186 ILVDPLGKPLPFSEVTGTKAKGDNASAGDYVFGLRATGRYNGQPLTGTGKIGGMLALRSA 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS----- 270
                +Q    +    +   G +               AGD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFTGTVNDPMNMGGVDLQLKFAGDSLGELYELTGVLLPDTPPF 305

Query: 271 ----RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES 324
                L         +V     +  +    +           +       L       + 
Sbjct: 306 ETDGHLVAKLDTEKSSVFDYRNFNGRIGDSD----IHGTLTYTTGKPRPKLEGDVESRQL 361

Query: 325 MHDLNETDFFEEEEKKNKNDDLKKD 349
                      +  K  K+ ++KKD
Sbjct: 362 RLADLGPLIGVDSGKGTKSKEVKKD 386


>gi|290511904|ref|ZP_06551272.1| hypothetical protein HMPREF0485_03676 [Klebsiella sp. 1_1_55]
 gi|289775694|gb|EFD83694.1| hypothetical protein HMPREF0485_03676 [Klebsiella sp. 1_1_55]
          Length = 683

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/406 (12%), Positives = 112/406 (27%), Gaps = 45/406 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56
           R+ L+ +     +++V    V    DW   +    ++ +  + +  A++G + +      
Sbjct: 5   RKTLVIITGTILLLIVLFLIVLATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQP 64

Query: 57  ------HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P+P V  +DI +             +  +      L LLS  + +  + ++
Sbjct: 65  DERGWRSWIPWPHVHAEDIVLGNPPAIPQVTMIHLPRVEATLAPLALLSKTVYLPWIKLE 124

Query: 109 QPHLNFYLSSKGVSNWFQR--------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           QP +     ++  +NW  +          +     +  L+ I    G I I D+ +    
Sbjct: 125 QPDVRLIRLAEDNNNWTFQLAGDQRTSGDSAPSSWSFRLDNILFDRGTIAIDDKITRSDI 184

Query: 161 FL------SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214
            +        L         +  S   +      +  +G           KI      ++
Sbjct: 185 TILVDPLGKPLPFSEVTGTKDQHSAAKVGDYVFGLSLKGRYKDQPVTGNGKIGGMLALRS 244

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270
            +    +Q    +    +   G +               AGD  + L             
Sbjct: 245 ASTPFPLQGDFHSGNTRVAFSGTVSDPLNVGGIDLRLKFAGDSLRDLYDLTGVLLPETPS 304

Query: 271 -----RLSGNFKISDG-NVRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAE 323
                RL  +FK  +        +  +    +           +       L+      +
Sbjct: 305 FSTDGRLRADFKQKNRMRFDYQDFNGRIGDSD----IHGSLTYTTGKPRPKLSGDMESKQ 360

Query: 324 SMH-DLNETDFFEEEEKKNKNDDLKKDD-IQYSVNKKEEKDNSHDK 367
               DL      +  +   K    +  D  Q +           DK
Sbjct: 361 LRLADLGPLIGVDSGKGTKKGAARQAGDRPQPAGKVLPADRFETDK 406


>gi|77462553|ref|YP_352057.1| hypothetical protein RSP_2006 [Rhodobacter sphaeroides 2.4.1]
 gi|77386971|gb|ABA78156.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
          Length = 660

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 106/346 (30%), Gaps = 25/346 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R ++     LF +         + +      E   R+     G+ + + G ++  I P 
Sbjct: 1   MRWLVRLAAVLFGLA-ALFLVALVLMPRERVAELAAREFEAATGRDLTISGDVRPSIWPR 59

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V    + +            +   L +  + L L+SG  R+  + +++P +     ++
Sbjct: 60  LGVRTGPVTVANAPWTDEGPMLEARSLEIGLDTLALMSGAWRISRIALEEPVIRLERDAE 119

Query: 120 GVSNWFQRKST-------------------MDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           G +NW                                 L++  V GGR+  ID+ +    
Sbjct: 120 GRANWDLSSPPRGAEGRAAEGRASPAPASAQAGFPLFSLDEGLVTGGRVLWIDRAAGTRT 179

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            +S L+L++S       + L++            G      ++       P +   ++  
Sbjct: 180 EISGLDLRVSLPEAGGPADLTLSGQANGHGFAVEGRLAEAGTSLAGRVA-PVRLSLVTGA 238

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280
            ++                 +        + ++ G     L   L  ++  L+G   +++
Sbjct: 239 ARIGFDGEAGSAPPMAEGTIDAALGDLGDLAALFGQDRPTLPEGLGRRQIALTGGLTLAE 298

Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
           G       +   +  +S+        + Q E   L  +        
Sbjct: 299 GG--TLHLRNGQVTADSNRLAVEADLIPQGERPKLEANLRAETLNL 342


>gi|86136538|ref|ZP_01055117.1| AsmA family protein [Roseobacter sp. MED193]
 gi|85827412|gb|EAQ47608.1| AsmA family protein [Roseobacter sp. MED193]
          Length = 645

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/387 (12%), Positives = 104/387 (26%), Gaps = 28/387 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +L  LG      L     V   +           Q     G+K+   G ++  + P 
Sbjct: 1   MKLILRILGA-VVATLAVLLVVLFMLPGEKVAGLAADQIEAQTGRKLTFHGKVRFTLWPV 59

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V    + +              E LS+      LL G++RV ++    PHLN   +++
Sbjct: 60  LGVKSDGVSLSNAPWAGPEPMLTAERLSIGISAGDLLQGKVRVTEVSALLPHLNLSENAE 119

Query: 120 GVSNWFQ-------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
           G  NW                      +  + +EK+ + G  ++           +S ++
Sbjct: 120 GQGNWVLGGGADAGADPAVVAPENQSAVLPISIEKLTLTGASLRY-QPHQGAPIEMSMVD 178

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
           + +     +    + + +       +           F    N    +   S+      L
Sbjct: 179 MMLRWPDPSGTVNVDLTARPAGAPVQIQAEVG----TFADFLNGAVSSIGASVAADGGIL 234

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK--ISDGNVR 284
            +    DL G                +       ++L     ++ + G      +DG + 
Sbjct: 235 RFDGRADLTGAATGRVTAKTSDTAAFLTAFGQSGISLPQGLGQAMVVGADATYTTDGRLA 294

Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-LNETDFFEEEEKKNKN 343
           +    L           +    ++  +        NG       L               
Sbjct: 295 LRDMTLDL----DGNKLEGGADITLAQVPEFTAQLNGGHLRVPGLTSAVGENGAAAGEGG 350

Query: 344 DDLKKDDIQYSVNKKEEKDNSHDKENQ 370
               KD I  S   +         E+ 
Sbjct: 351 SGWSKDPIDASALAQANGTAVLSFESL 377


>gi|206578613|ref|YP_002236114.1| AsmA family protein [Klebsiella pneumoniae 342]
 gi|206567671|gb|ACI09447.1| AsmA family protein [Klebsiella pneumoniae 342]
          Length = 683

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/406 (12%), Positives = 112/406 (27%), Gaps = 45/406 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------ 56
           R+ L+ +     +++V    V    DW   +    ++ +  + +  A++G + +      
Sbjct: 5   RKTLVIITGTILLLIVLFLIVLATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQP 64

Query: 57  ------HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P+P V  +DI +             +  +      L LLS  + +  + ++
Sbjct: 65  DERGWRSWIPWPHVHAEDIVLGNPPAIPQVTMIHLPRVEATLAPLALLSKTVYLPWIKLE 124

Query: 109 QPHLNFYLSSKGVSNWFQR--------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           QP +     ++  +NW  +          +     +  L+ I    G I I D+ +    
Sbjct: 125 QPDVRLIRLAEDNNNWTFQLAGDQRTSGDSAPSSWSFRLDNILFDRGTIAIDDKITRSDI 184

Query: 161 FL------SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214
            +        L         +  S   +      +  +G           KI      ++
Sbjct: 185 TILVDPLGKPLPFSEVTGTKDRHSAAKVGDYVFGLSLKGRYKDQPVTGNGKIGGMLALRS 244

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270
            +    +Q    +    +   G +               AGD  + L             
Sbjct: 245 ASTPFPLQGDFHSGNTRVAFSGTVSDPLNVGGIDLRLKFAGDSLRDLYDLTGVLLPETPS 304

Query: 271 -----RLSGNFKISDG-NVRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAE 323
                RL  +FK  +        +  +    +           +       L+      +
Sbjct: 305 FSTDGRLRADFKQKNRMRFDYQDFNGRIGDSD----IHGSLTYTTGKPRPKLSGDMESKQ 360

Query: 324 SMH-DLNETDFFEEEEKKNK-NDDLKKDDIQYSVNKKEEKDNSHDK 367
               DL      +  +   K +     D  Q +           DK
Sbjct: 361 LRLADLGPLIGVDSGKGTKKGDARQAGDRPQPAGKVLPADRFETDK 406


>gi|146309272|ref|YP_001189737.1| AsmA family protein [Pseudomonas mendocina ymp]
 gi|145577473|gb|ABP87005.1| AsmA family protein [Pseudomonas mendocina ymp]
          Length = 741

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/400 (13%), Positives = 124/400 (31%), Gaps = 76/400 (19%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFE 80
            +    D  D++++  + A      ++ ++G I   + P+  +   D  +   +      
Sbjct: 25  ALTHLFDPNDYKDEIRQIARDKANLELQLRGDIGWSLFPWLGLELTDATLASADTPDKPF 84

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------------- 125
           + +  + +    +PLL  E+++ D+ +D  +LN     KG  NW                
Sbjct: 85  ADLRMIGLSVRVMPLLRKEVQMSDIRVDGLNLNLQRDDKGRGNWEGVGRPAQASATQPAP 144

Query: 126 -------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                          +        + ++ + +   RI   D +  Q + L ++ L+  A 
Sbjct: 145 SEPAPSKDAPPSQPSEKPAGQPVKLDIDSLTLSNSRIDYSDAQKGQQFTLENIELKTGAI 204

Query: 173 FLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF---KITANFPAKNKAISLKI 221
                 P+   +        ++     EG   FD     +    +     A  + +  K 
Sbjct: 205 REGASIPVKFSAFFGTNQPVLRARSEVEGQLRFDRVLKRYQFEDLKLAGEASGEPLKGKT 264

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281
             F     +++DL  N+       + +      G     +      K ++LSG   I+  
Sbjct: 265 LNFSAQGQLLVDLAANIAEWNGLKLSANQLRALG----EIKARELDKDAKLSGGLSIAPL 320

Query: 282 NVR------------------ISRYKL--------------QSILPNSSTDEDNKTKVSQ 309
           N+R                  +S+++L              +  L    +    K  V+ 
Sbjct: 321 NLREFLEGVGVELPPMQAANSLSQFELASRLNGSSKGMMLEELNLKLDGSTFTGKLGVTD 380

Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349
                L     G +   +       ++     +  ++K+ 
Sbjct: 381 FARQALRADLKGDKLDLNRYLPPKAQDSAGAARKAEVKES 420


>gi|39937217|ref|NP_949493.1| hypothetical protein RPA4157 [Rhodopseudomonas palustris CGA009]
 gi|39651075|emb|CAE29598.1| possible asmA protein, assembly of outer membrane proteins
           [Rhodopseudomonas palustris CGA009]
          Length = 667

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/342 (16%), Positives = 115/342 (33%), Gaps = 32/342 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R+ I +  L +  + GAF + L ID    R+  E+Q     G ++ V G I + I P 
Sbjct: 24  IKRLGISVAVLIAAAVTGAFALSLTIDRGALRQAVEQQLRAATGLQLVVDGDIDVTIFPR 83

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            +V F ++R+   EDG       ++ L      LPLL     + D+ ++QP ++    + 
Sbjct: 84  STVTFSNVRLKSDEDGGTDAALSVKTLITNLRLLPLLLRRFEIADVMLNQPSIHVVRDAG 143

Query: 120 GVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
           G SNW        R     +   V   +I ++ G +   D+ +     + D++L ++   
Sbjct: 144 GRSNWTPFIDSLTRTMKPGLDDQVSFSEIRLQDGELSYRDETAGVQEHIDDIDLSLAWPS 203

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
           ++        +  G     G    D   +     A        I L++       P+ I 
Sbjct: 204 ISRTF-----AATGQFDFRGE-RLDGSITVADFIAALRGDTSGIKLRLA----GAPMKIA 253

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRI 285
             G +  N+      G  S      +        +           L     +   ++ +
Sbjct: 254 FDGTIA-NKTSLSLIGTVSADSASLRNALRWAGQEPPGTGGFGRFALKARANLIGASIAL 312

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQ-DEENLLNFSENGAESMH 326
           +   ++          +     +       L  +        
Sbjct: 313 TNVNVEL----DKNVAEGVMTYTLAGGHQGLQATLAAGSIDV 350


>gi|157825605|ref|YP_001493325.1| outer membrane assembly protein [Rickettsia akari str. Hartford]
 gi|157799563|gb|ABV74817.1| outer membrane assembly protein [Rickettsia akari str. Hartford]
          Length = 830

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/373 (13%), Positives = 132/373 (35%), Gaps = 21/373 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + L     +F+ +++    +P FI   +++     +   +  + + + G IK+ +LP 
Sbjct: 1   MPKNLKYSLIIFTSIILLLVVMPFFIPLDNYKGVIIDKVKEVTNRDLTINGNIKLSLLPN 60

Query: 62  PSVFFKDIRID--QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           P++   +I++             +E         PL  G I V  + + +P +N  + + 
Sbjct: 61  PAISLSEIKLSSINGTKDPHLVSVESAKASLRLFPLFRGAIEVASIELQKPIINLEVLNN 120

Query: 120 GVSNWFQRKSTMDMIH-----------------NVILEKIHVKGGRIKIIDQESDQVYFL 162
           G  NW    S                        +++    +  G++  I++ S+++   
Sbjct: 121 GQKNWLFDTSNNKPKKNHFSYAESTNTKSELELPILISHFKIIDGKVIYIEKNSEKILND 180

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
            +L  +I +    I   L++ +++  +  +G               N  ++   I     
Sbjct: 181 INLETKIKSLKGPIDFTLALSALQQQINIDGNIEELRPIIPLSANINLASEKIKIEGNFD 240

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGD-FSKLLNLELSAKKSRLSGNFKISDG 281
               ++    ++ GN             + +     +   N+ +   +   +    +++ 
Sbjct: 241 SENNSFIGKANIKGNTKTLAMPAYLQNDYELTTAITADNKNVTIKDARLNYTNIELLANA 300

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341
           N  I R  L+S +  +  +   +   + D+ N++    +  + + D  +    +     N
Sbjct: 301 NYDIERNNLKSNIIVNPGNIITELSSNLDKTNII-LQADSLKPILDALKLKIDKLPPIIN 359

Query: 342 KNDDLKKDDIQYS 354
           +   L  + I  S
Sbjct: 360 QKLMLTSNVISNS 372


>gi|237798317|ref|ZP_04586778.1| AsmA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331021169|gb|EGI01226.1| AsmA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 688

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/381 (11%), Positives = 96/381 (25%), Gaps = 45/381 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    +VL     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIFAWTGATLLLVLALLIIVIVTFDWNRIKPTLNEKVSEALHRPFAINGDLDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   E         ++ +  R   LPLL  ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLMLGNPEWSKTPQMVTLKHVEFRLSLLPLLVQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW                 V +  I    G +   DQ  +    + 
Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPDAEPSKWVVDIGAIKFDKGLVSFNDQTLNANLDVV 184

Query: 164 DLNLQISARFLNIISPLSIDSIKG---------SVIAEGTGNFDNKRSAFKITAN--FPA 212
            +++         I                   +      G +  ++ +           
Sbjct: 185 -IDMLGKPIPFGEIVGSKEAQKAQEKGAVPQDYAFGLAVKGQYHGQKLSGTGKIGGLLAL 243

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-- 270
           K+      +Q           + G L   +          ++G     L           
Sbjct: 244 KDANQPFPVQADVKIGDTHAVIAGALTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDS 303

Query: 271 ---RLSGNF-----KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENG 321
                 G         +  + R   +  +    +   D      V+      L+    + 
Sbjct: 304 PAYATDGRLIAKLHDPAGASFRYEGFNGKIGNSDIHGDL---GYVASQPRPKLSGVLVSN 360

Query: 322 AESMHDLNETDFFEEEEKKNK 342
                DL      +    + K
Sbjct: 361 QLLFSDLAPLIGADSNAAQKK 381


>gi|167031330|ref|YP_001666561.1| AsmA family protein [Pseudomonas putida GB-1]
 gi|166857818|gb|ABY96225.1| AsmA family protein [Pseudomonas putida GB-1]
          Length = 748

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 99/307 (32%), Gaps = 42/307 (13%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KE 75
           +   F +    D  D++++  + A      ++ + G I   + P+  +   +  I    +
Sbjct: 20  VALGFALTHLFDPNDYKDEIRQLARDKAHVELTLNGDIGWSLFPWLGLELHEASIATLAK 79

Query: 76  DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------- 124
                + ++ L +    LPLL  E+++ D+ ++  +L      +G  NW           
Sbjct: 80  PKEPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLTLARDEQGHGNWEDIGKPLPAQN 139

Query: 125 ---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
                                 D    + ++ + V   R++  D ++ Q Y    + L  
Sbjct: 140 GTTAGAPAQPPAEQKPTTADNNDRAVKLDIDSLTVNNARVQYTDAKTGQSYSAESIQLST 199

Query: 170 SARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAFKI---TANFPAKNKAIS 218
                    PL   +        IK      G   FD K   +       +     +   
Sbjct: 200 GPVHEGANIPLKASAFISASQPSIKARTELAGELRFDRKLKRYNFEDMRLSGETSGEPTG 259

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278
            K   F     +++DL  N+       + +      G     LNL    K  +LSG   I
Sbjct: 260 GKTVTFAAQGQLLVDLAANVASWNGLKVSANQLRALG----ELNLRDLDKAPQLSGGLSI 315

Query: 279 SDGNVRI 285
           +  N+R 
Sbjct: 316 AQFNLRT 322


>gi|318607897|emb|CBY29395.1| uncharacterized protein YhjG [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 713

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/432 (11%), Positives = 116/432 (26%), Gaps = 73/432 (16%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           +VL G+  +  ++L+ A       DW   +     + +  + +  A++G + +       
Sbjct: 6   KVLTGIVGVILLLLIAAIVFIKTFDWNRLKPTINEKVSTELQRPFAIRGNLGVDWSRKGD 65

Query: 58  ------ILPFPSVFFKDIRIDQKED------------------------------GSFES 81
                  +P+P +  +D+ +    D                                   
Sbjct: 66  EPGWRGWVPWPHIHAEDLVLGNPPDLVGGNAAGKNNNVVGKSNNAESKTESTAFPTGEMV 125

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------FQRKSTMDMI 134
            ++ +      L LL+ E+ +  +++ QP       + G +NW            +    
Sbjct: 126 TLKRVDASIAPLALLAKEVWIPRIWLTQPDATLLRLADGKNNWTFNLANSPAGDESSASD 185

Query: 135 HNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDL-------NLQISARFLNIISPLSIDSI 185
            +V ++ I    G+I + D   ++D    +  L        +  +             + 
Sbjct: 186 WSVNIDDIVFDRGQINLKDAVLKADLQAVIDPLGKPLPFAEVTGARNEKKATEKAQNKAP 245

Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243
                 +  G +  +               + +I   +Q    +    + + G L     
Sbjct: 246 DFVFGWKIDGKYQGQPLTGSGKIGGMLSMNDASIPFPLQADVRSGSTRVAVAGTLTDPAN 305

Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQSI 293
                     +G     L   +              RL  + K + G V R   +  +  
Sbjct: 306 LAGLDLQLKFSGASLDNLYPLIGVLLPATPPFNTDGRLIASLKQAGGAVYRYENFNGKIG 365

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353
             +   D              L  + +  +            +  ++  N   +      
Sbjct: 366 DSDIHGDLTYTAS---QPRPKLVGNMSSDKLRFADLAPLIGADSNQEKANRGERSRQPSN 422

Query: 354 SVNKKEEKDNSH 365
            V   E+ D   
Sbjct: 423 KVLPTEKFDTKS 434


>gi|330963380|gb|EGH63640.1| hypothetical protein PSYAC_01782 [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 688

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/380 (10%), Positives = 99/380 (26%), Gaps = 43/380 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    +VL     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIFAWTGTTLLLVLAVLVIVIVTFDWNRIKPTLNEKVSEALHRPFAINGDLDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +   +         ++ +  R   LPLL  ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLTLGNPDWSKTPQMVNLKHVEFRLSLLPLLVQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       + +  I    G +   DQ  +    + 
Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVIDIGAIKFDKGLVSFNDQTLNANLDVV 184

Query: 164 --------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAK 213
                     +  + ++               +      G +  ++ +           K
Sbjct: 185 IDMLGKPIPFSEIVGSKEAQKAQEKGAVPQDYAFGLAVKGQYHGQKLSGTGKIGGLLALK 244

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
           + +    +Q           + G L   +          ++G     L            
Sbjct: 245 DASQPFPVQADVKIGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDSP 304

Query: 271 ------RLSGNF-KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENGA 322
                 RL       +  N R   +  +    +   D      ++      L+    +  
Sbjct: 305 AYSTDGRLVAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GFIASQPRPKLSGVLVSNQ 361

Query: 323 ESMHDLNETDFFEEEEKKNK 342
               DL      +    + K
Sbjct: 362 LLFSDLAPLIGADSNAAQKK 381


>gi|293393476|ref|ZP_06637787.1| AsmA family protein [Serratia odorifera DSM 4582]
 gi|291424077|gb|EFE97295.1| AsmA family protein [Serratia odorifera DSM 4582]
          Length = 693

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/378 (11%), Positives = 100/378 (26%), Gaps = 39/378 (10%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRI 71
               DW   +     + +  + +  A++G + +              +P+P +  +DI +
Sbjct: 26  IATFDWNRLKPAINEKVSAELQRPFAIRGDLGVAWTRNKDEGGWRAWVPWPHIHAEDIVL 85

Query: 72  DQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKS 129
                  G     ++ +      L LL  ++ +  +++ QP+      + G +NW    +
Sbjct: 86  GNPAAIPGEHMVTLQRVDASIAPLALLGKQLSIPRIWLKQPNARLQRLANGENNWTFHLA 145

Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS- 188
             D           V    I     + D    +   + +     L    P S  + K   
Sbjct: 146 NSDSDPQAAASDWSVNIHDIVFDRGQLDYKDAVLKADFRAQIDPLGKPLPFSEVTGKKQQ 205

Query: 189 ---------VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGN 237
                       +  G ++ +  +           +N  +   +Q    +    + + G 
Sbjct: 206 GEAVTPDYVFGWKVQGRYNGEPLSGSGKIGGMLSLQNAQLPFPLQADVRSGSTRVVVAGT 265

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFKISDGNV-RISR 287
           L    K          +GD    L                   L+       G V +   
Sbjct: 266 LSDPLKLAGLDVQLKFSGDSLGNLYPLTGVLLPNTPPYATDGHLTAKLHDKGGAVYQYQN 325

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347
           +  +    +   D      V+      L       +            +   +  N   K
Sbjct: 326 FAGKIGDSDIHGDLR---YVASKPRPKLTGEVVSKQLRFADLAPLIGADTNAEKANRGEK 382

Query: 348 KDDIQYSVNKKEEKDNSH 365
                  V   E  D++ 
Sbjct: 383 TRQPSDRVLPVERFDSNS 400


>gi|322832464|ref|YP_004212491.1| AsmA family protein [Rahnella sp. Y9602]
 gi|321167665|gb|ADW73364.1| AsmA family protein [Rahnella sp. Y9602]
          Length = 616

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/363 (11%), Positives = 110/363 (30%), Gaps = 52/363 (14%)

Query: 18  VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG 77
            G  ++   I+  DFR+    +  +  G ++A+ G ++ H+ P  S+      +      
Sbjct: 17  AGMTSLVFLINPNDFRQYMVERVEVKSGYQLAINGSLRWHVWPQLSIIAGQTSLTAPGAK 76

Query: 78  SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQRKSTMDM--- 133
           +     E + +  +  PL+S ++ V  + +    +       +   N     ST      
Sbjct: 77  APVVSAENMRLDVKLWPLISHQLAVKQVLLKNAVIRLTPETEENQPNAPVAPSTPTPVAP 136

Query: 134 -------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186
                       ++KI V    + I  +  D+   + D+NL++                 
Sbjct: 137 GASELEAGWKFDIDKISVAD-SLLIWQRGDDEQINVRDINLEMEKNDNR----------- 184

Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
                                 N   ++ + ++K  L    YP  +             I
Sbjct: 185 ------------QASIQLSSRINRDQRDLSFTMKADLDMQHYPQAVS----------ASI 222

Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
               + + G    +  L+ +     +  +++  +  + +++  L +    +         
Sbjct: 223 SKFTYQLNGADIPVKGLQGNG---SMQVSYQRDNNMLTLNQLALSA----NDNQISGTAS 275

Query: 307 VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHD 366
               E      +    +   D       + +E+ ++           + +  E+ +  +D
Sbjct: 276 AKLGELADYQLNLTADKLDLDALSGWQPDTQEQSSQTAQSVTSAPVIARDVDEQPNGLND 335

Query: 367 KEN 369
            + 
Sbjct: 336 LQT 338


>gi|154251008|ref|YP_001411832.1| AsmA family protein [Parvibaculum lavamentivorans DS-1]
 gi|154154958|gb|ABS62175.1| AsmA family protein [Parvibaculum lavamentivorans DS-1]
          Length = 677

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 94/290 (32%), Gaps = 29/290 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R++  +  L  V++     VP+ I    ++           G+ + + G I +   P 
Sbjct: 1   MSRLIAIIVGLILVLVAVIVAVPMLIPMETYKNQVIATVKQQTGRDLRIDGDIGLSFFPN 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            +V  +++             + ++ +    + +PL SG I +    +  P ++  +   
Sbjct: 61  IAVSLENVGFSNASWAREPEMASMKEMRAALKLMPLFSGNIEIDSFSLVDPVIHLEVRRD 120

Query: 120 GVSNWFQRKSTMDMIHN--------------VILEKIHVKGGRIKIIDQESDQVYFLSDL 165
           G  NW    +      +              V L  + V+ G     + ++   Y    +
Sbjct: 121 GTPNWQFEAAQAAAPESSAATEDGGGSSLGGVRLGDVSVRNGTATYRNAQTGASYAAERV 180

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP-AKNKAISLKIQLF 224
           N+            L++  +    IA G+  ++       + A+ P A  +     + L 
Sbjct: 181 NM-----------DLALPGLDDPFIANGSLVWNGDEIGIDLRADRPRALTEGGETPVALT 229

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274
             A  +     G +   +    ++G   +     + L     +      G
Sbjct: 230 ISAPKVDASYSGTVKPLDGLA-FAGEVDLNVPSVRELAAWSGSPLPAGDG 278


>gi|120603205|ref|YP_967605.1| AsmA family protein [Desulfovibrio vulgaris DP4]
 gi|120563434|gb|ABM29178.1| AsmA family protein [Desulfovibrio vulgaris DP4]
          Length = 701

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/443 (12%), Positives = 123/443 (27%), Gaps = 68/443 (15%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           ++R  L     + +++L       L  D    R         + G+ +++ G + + + P
Sbjct: 4   LMRFALFTFAAIIAIILFVVMAARLAFDPEALRSRAATTIAEMTGRSVSISGPVTLDLWP 63

Query: 61  FPSVFFKDIRIDQKEDG---SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
             +V F+ + +   E     S    I         +PL S  +    + ++  H+N    
Sbjct: 64  RLAVDFEGLAMAPPEGFADASPLLTIGKADASLRIIPLFSRRMEFDHIRLEGLHINLVRD 123

Query: 118 SKGVSNWFQR--------------------KSTMDMIHNVILEKIHVKGGRIKIIDQESD 157
           + G  NW                                  L+++ +    + + D  + 
Sbjct: 124 ADGNGNWTPPAGRTITTPVPSEKDSGANPSAMPDVPRPAFSLQRLELADATLSLRDIATG 183

Query: 158 QVYFLSDLNLQISARFLNIISPLSIDSIKG---------------SVIAEGTGNFDNKRS 202
           +     D++           +      + G               +  A+G+ + +    
Sbjct: 184 ESIRARDIDFVADFDAEGKAAVGLSLVLAGERPTFSTGLALDATVTPRADGSVSLELAPL 243

Query: 203 AFKITAN-FPAKNKAISLKIQLFPLAY----PIIIDLFG-NLFWNEKQPIYSGVFSVAGD 256
           A    +   PA      L+ +L  +      P  + + G NL          G  S A +
Sbjct: 244 AITPHSGVIPAAVGQTQLRGRLNIIPAKEGQPARLTIEGMNLTAPFMTATVDGSLSAARE 303

Query: 257 FSKLLNLELS-------------------AKKSRLSGNFKISDGNVRISRYKLQSILPNS 297
            S    LE S                     K+   G+  ++   +++S    +      
Sbjct: 304 ASLSFALEGSPRKGLAAFGILLDTRATDALDKATAKGDVNVAGQKLQLSGMDARI----D 359

Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNK 357
           ST       +    +  +  +    +   D         + K +          Q   + 
Sbjct: 360 STTFKGDVLIPLSGDTPVKGTVALGDIDIDRYLPGKDAHKTKSSGTAP-GPPSDQPKADA 418

Query: 358 KEEKDNSHDKENQENFSGDKMIL 380
                 S     +   + D  +L
Sbjct: 419 PPASSTSDKASGKSAATKDDTVL 441


>gi|33593788|ref|NP_881432.1| hypothetical protein BP2839 [Bordetella pertussis Tohama I]
 gi|33563861|emb|CAE43111.1| exported protein, conserved [Bordetella pertussis Tohama I]
 gi|332383190|gb|AEE68037.1| hypothetical protein BPTD_2791 [Bordetella pertussis CS]
          Length = 702

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/395 (11%), Positives = 100/395 (25%), Gaps = 57/395 (14%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQ 73
            +DW   +     QA+  +G+  A++G + +              +P+P     D+ I  
Sbjct: 28  TLDWNRLKPTINEQASAALGRPFAIQGDLSVQWACEPGQGGWRGWVPWPHFVVHDVAIAN 87

Query: 74  KEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--RKS 129
                      +     R   LPLL   + +  + +     +    + GV+NW      +
Sbjct: 88  TVWARDPNLLTLRRGEFRLAPLPLLRQRVVIRRIQLSGLRADLQRRADGVANWEFTMPDT 147

Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL-----------------------SDLN 166
                  V ++ I    G I+  D  +     +                       +D  
Sbjct: 148 GEPSPWKVDIDAIGFDQGAIRYADAIAQADLDVLVDPLGKPVPFAELAGAPAAGGAADQA 207

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLF 224
              +       +         +   +  G + +               ++      +Q  
Sbjct: 208 AGKADSGKAADAAAPAAPPDYAFGWQVNGRYKDLPLEGTGKVGGMLALRDARQPFPVQAE 267

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGN 275
                  I + G L              +AG     L                  RL   
Sbjct: 268 VAIGSTRIAVAGTLTDPMSLGALDLRLKLAGASMANLYPLTGVTLPDTPPYSTDGRLVAR 327

Query: 276 FKISDG-NVRISRYKLQSILPNSSTDEDNKTKVSQDE-ENLLNFSENGAES-MHDLNETD 332
            + S G       +  +    +           +  +    L+   +     M DL    
Sbjct: 328 LQDSKGARFEYRDFNGKVGASD----LHGDITFALQQPRPRLSGKLSSRLLRMADLGPLI 383

Query: 333 FFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
             +    K+   + +K   Q +      ++   D+
Sbjct: 384 GVQSGGAKSVKAEGEKAVAQPADKVLPVQEFRTDR 418


>gi|311104055|ref|YP_003976908.1| AsmA family protein 1 [Achromobacter xylosoxidans A8]
 gi|310758744|gb|ADP14193.1| AsmA family protein 1 [Achromobacter xylosoxidans A8]
          Length = 695

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/411 (10%), Positives = 112/411 (27%), Gaps = 42/411 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++ IG+    ++++     V    DW   +     +A+  +G+  A+ G + +       
Sbjct: 6   KIAIGIVGGAALLVAVLVVVIATFDWNRAKPFINERASAAIGRPFAINGDLSVEWGRDSD 65

Query: 57  -----HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P +   DI +           + ++   +    LPLL   + +  + + +
Sbjct: 66  GGGWRAWVPWPHIIANDISVGNAPWAKAPQFATLKRGELSLALLPLLRQRVVIRRIQLTE 125

Query: 110 PHLNFYLSSKGVSNWFQ--RKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDL 165
           P  +    + G +NW     ++       + + +I    GR+ ++D+  ++D    +  L
Sbjct: 126 PAADLQRLADGRANWEFTLPETGEPSPWVLDINEIGFDKGRVGLVDEVLKADLTVLVDPL 185

Query: 166 NLQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAFKITANFPAKNKAI 217
              +    +   +  + +                +G       +   K+      ++   
Sbjct: 186 GKPVPFADVAGAAFAAEEGGAAPSPRDYVFGWKLDGKYKGLATKGEGKVGGMLALQDARQ 245

Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RL 272
              +Q           + G L              ++G     L                
Sbjct: 246 PFPVQADVAIGGTRASVAGTLTDPVNLGALDLRLKLSGASMAQLYPLTGVTLPDTPPYST 305

Query: 273 SGNFKISDGN-----VRISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH 326
            G+      N          +  +    +           +       L    +  +   
Sbjct: 306 DGHLVAKLRNPGGAVFDYKGFNGKVGNSD----LHGDISFALGMPRPKLTGKLSSKQLRM 361

Query: 327 -DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376
            DL         +      D  KD        K     +   +   +   D
Sbjct: 362 EDLGPLIGVPSGKVAGAATDQAKDAPAKPKGGKVLPTQAFRTDRWRDMDAD 412


>gi|146313553|ref|YP_001178627.1| AsmA family protein [Enterobacter sp. 638]
 gi|145320429|gb|ABP62576.1| AsmA family protein [Enterobacter sp. 638]
          Length = 686

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/407 (12%), Positives = 114/407 (28%), Gaps = 46/407 (11%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           R++  +  +F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   RIVTWVAGIFLLLIVVAIIIIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKD 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V   DI +    D        +  +      L LL+  + +  + + Q
Sbjct: 66  ETGWRSWVPWPHVHANDIVLGNPPDIPEVTMVHLPRVEATLAPLALLTKTVYLPWIKLQQ 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+   NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNDNWTFNLASSDEKDPNAPPSSWSFRLDNILFDRGRIAIDDKVSKADVE 185

Query: 162 LSDLNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +    L     F  +      D  +         + TG ++ +              +++
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKDDTQKVGDYVFGLKATGRYNGQPLTGSGKIGGVLALRSE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS----- 270
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNSRVAFVGTVNDPMKMGGVDVQLKFSGDSLGELYDLTGVLLPDTPPF 305

Query: 271 ----RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES 324
               RL         +V     +  +    +           +       L       + 
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRNFNGRIGDSD----IRGSLTYTTGKPRPKLEGDLESRQL 361

Query: 325 MH-DLNETDFF--EEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
              DL         +  +K K+ + KK +       K    +  + +
Sbjct: 362 RLADLGPLIGVDSGKGAQKAKSAEQKKGEKDIQPADKVLPYDRFETD 408


>gi|148545562|ref|YP_001265664.1| AsmA family protein [Pseudomonas putida F1]
 gi|148509620|gb|ABQ76480.1| AsmA family protein [Pseudomonas putida F1]
          Length = 748

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 100/306 (32%), Gaps = 42/306 (13%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KE 75
           +   F +    D  D++++  + A      ++ + G I   + P+  +   +  I    +
Sbjct: 20  VALGFALTHLFDPNDYKDEIRQLARDKAHVELTLNGDIGWSLFPWLGLELHEASIATLNK 79

Query: 76  DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------- 124
                + ++ L +    LPLL  E+++ D+ ++  +L      +G  NW           
Sbjct: 80  PKEPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLTLARDEQGHGNWEDIGKPLPAQN 139

Query: 125 ---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
                               + D    + ++ + V   R++  D ++ Q Y    + L  
Sbjct: 140 GAGTDAQAQAPAEQTPATTDSNDRAIKLDIDSLTVNNARVQYTDAKTGQNYSAESIQLST 199

Query: 170 SARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAFKI---TANFPAKNKAIS 218
                    PL   +        IK      G   FD K   +       +     +   
Sbjct: 200 GPVHEGANIPLKASAFISASQPSIKARTELAGELRFDRKLKRYNFEDMRLSGETSGEPTG 259

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278
            K   F     +++DL  N+       + +      G     LNL    K  +LSG   I
Sbjct: 260 GKTVTFAAQGQLLVDLAANVASWNGLKVSANQLRALG----ELNLRDLDKAPQLSGGLSI 315

Query: 279 SDGNVR 284
           +  N+R
Sbjct: 316 AQFNLR 321


>gi|220936108|ref|YP_002515007.1| AsmA family protein [Thioalkalivibrio sp. HL-EbGR7]
 gi|219997418|gb|ACL74020.1| AsmA family protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 712

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 48/368 (13%), Positives = 115/368 (31%), Gaps = 66/368 (17%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SF 79
            +    D   +++          G+ + ++G I + + P+  +   +  +   E      
Sbjct: 24  YLIATFDPNAYKDRISAVVKEQTGRDLVIEGEIGLSLFPWLGLSLGETWLSNAEGFADEP 83

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR------------ 127
            ++I  + +    +PLL  E++V  + +   +LN    ++G SNW               
Sbjct: 84  FARIGEVELSVALMPLLRRELQVQRIRLVGLNLNLERDAQGRSNWDDLVAEAEADGREDR 143

Query: 128 -----KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                      + ++ +  + +   R+   D ++     +  LNL++    L + +PLS+
Sbjct: 144 ERHEGAGEGPGLKDLDIGGVEILDARVSWRDAQAGTALRVDPLNLELGRIRLGVETPLSL 203

Query: 183 D--------SIKGSVIAEG--TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
                    +++ SV        + D +R A +              +     L     +
Sbjct: 204 SLTLIQEDPALRASVDLNALVNVDLDAQRYALRRLVARLQAEGEALPRAMEVKLEADAAV 263

Query: 233 DLFGNLF----------------------WNEKQPIYSGVFSVAGDFSKLLNLELS---- 266
           +L  ++                          ++P+ +G         + L  +L     
Sbjct: 264 NLAEDVASLERLTLESLGVQLVGLVRVNNLTGEKPVATGELRSNTFSVRELLTQLGEAAP 323

Query: 267 -------AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319
                   KK  +   F+ +     +S+  +Q       T      +VS  E   +    
Sbjct: 324 ETADPEVLKKVAVDLAFEANAEAASLSQLLIQL----DDTRLRGSARVSNFERPAIRAEL 379

Query: 320 NGAESMHD 327
           +      D
Sbjct: 380 DVDRINLD 387


>gi|124265859|ref|YP_001019863.1| hypothetical protein Mpe_A0666 [Methylibium petroleiphilum PM1]
 gi|124258634|gb|ABM93628.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 697

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 84/317 (26%), Gaps = 30/317 (9%)

Query: 25  LFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFE 80
             + W     R     +     G+ + + G +         +  + +RI        +  
Sbjct: 52  WIVPWKLNPLRGWIGERVQAATGRTLVIDGDLWWRFGRHGRLTAEGLRIGNPAWAGRADF 111

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILE 140
            +   + +     PLL G I +  +  +QP L    +  G   W   ++  D    + L 
Sbjct: 112 LQARRVELEVALWPLLRGRIVLPHVRAEQPDLWLERAPDGRRTWRLERAQNDGKRTLFLG 171

Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200
            + +  G +   +                            +D  +  + AE +G +++ 
Sbjct: 172 SVALDRGVVTYAETARRAEVRF--------------AVQTRVDGGRPRLQAEASGRWNDL 217

Query: 201 RSAFKITANF--PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS 258
               +   +     +N+      +L        I   G++    +         +AG   
Sbjct: 218 PVKGRAEGDEVLQLRNEDQPYAFELDGRIGGTAIAANGSIVRPREPQRADLRIELAGSSL 277

Query: 259 KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313
              +             +  G  +          +K      +       +    +    
Sbjct: 278 GEWHRIAGVGLPDTPPYKTEGRLRFDGTRWTYEDFKAVVGRSD----LGGRVAFERR-AP 332

Query: 314 LLNFSENGAESMHDLNE 330
              FS     S  DL +
Sbjct: 333 RSLFSGELVSSSLDLAD 349


>gi|320182584|gb|EFW57474.1| hypothetical protein YhjG [Shigella boydii ATCC 9905]
          Length = 686

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 113/403 (28%), Gaps = 38/403 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLATLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---- 271
                +Q    +    +   G +    K          +GD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPF 305

Query: 272 -LSGNF--KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-D 327
              G    KI      +  Y+  +     S    +    +      L       +    D
Sbjct: 306 ETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLAD 365

Query: 328 LNETDFFEEEEK--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
           L      +  +   K+K  + KK +       K    +  + +
Sbjct: 366 LGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 408


>gi|330954803|gb|EGH55063.1| AsmA family protein [Pseudomonas syringae Cit 7]
          Length = 741

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   D  +          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120

Query: 117 SSKGVSNW------------------------FQRKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAVASTETSGETTPAPAPDAPKTDRPSQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204
           D    + +    + L           P+ + +        ++      G    D     +
Sbjct: 181 DARKGRTFMAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240

Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244
           +      +     + +  K   F     +++DL  N+                       
Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300

Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290
               P  SG  S+A    +     +      +S               +  ++ +    L
Sbjct: 301 LDKTPQISGGLSIAQLDLRAFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALDNLNL 360

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348
           +       +    +  V    +  L     G     D       EE +  K  +  +++ 
Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARKSEVQS 416

Query: 349 DDIQYSVNKKEEKD 362
            +   +       +
Sbjct: 417 GEAAAAAGDSPLPE 430


>gi|84623369|ref|YP_450741.1| hypothetical protein XOO_1712 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84367309|dbj|BAE68467.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 342

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 84/243 (34%), Gaps = 15/243 (6%)

Query: 33  REDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRA 90
           R   ER  +   G++  + G + + +    +V  + + +           +++    +  
Sbjct: 2   RGPVERAVSAKTGREFHL-GHLDVDLGRITTVRGERLSLGNASWSKRGAMAELNAAEIDV 60

Query: 91  EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIK 150
           E  PLL G++R+ ++ ++ P L     +      +    +        L ++ V  GR++
Sbjct: 61  ELWPLLRGKLRLPEIRLEHPTLLLEAGNDSHPGNWVFDQSHSDSSMPRLGRLLVNNGRLQ 120

Query: 151 IIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF 210
            ID  S     +           +N ++P S D     +  +G G +     A K     
Sbjct: 121 YIDDASRSDVDV----------AINSLAPPSSDQRAAPISIDGKGRWKGYPFALKGNTAS 170

Query: 211 PAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268
           P +        +I L   A      + G L    +  ++    +++G     L L  S  
Sbjct: 171 PLELSQSEHPFRIDLRGSAGATRTHVRGTLTNPFQLRVFDLQMALSGQDMADLYLLASQY 230

Query: 269 KSR 271
              
Sbjct: 231 HPH 233


>gi|209884410|ref|YP_002288267.1| AsmA [Oligotropha carboxidovorans OM5]
 gi|209872606|gb|ACI92402.1| AsmA [Oligotropha carboxidovorans OM5]
          Length = 989

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 50/318 (15%), Positives = 110/318 (34%), Gaps = 26/318 (8%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEG 85
           F+DW  ++  FE +A+ +VG  + V+G +   +LP P +    + +   +D   +     
Sbjct: 12  FVDWNKYKPQFEVEASRVVGAPVRVEGALDARLLPAPILRMHKLSVGAPKD-PTKLTAGK 70

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVK 145
           L +      LL GE R   + +    L+  L   G                + ++++ + 
Sbjct: 71  LDVEFSLGSLLRGEWRATQLSLTGLALDIGLDKDGR--IIAPAKGEFNFGELAIDRLDLA 128

Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK 205
            GR+ + D  S   + L  L+ +   R           S+ G++  EG+    + +  F+
Sbjct: 129 -GRVTLHDAASGAAHVLDGLDFRGDVR-----------SLGGNLRGEGSFLLRDAKQPFR 176

Query: 206 ITANFPAKNKAISLKIQLF-PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE 264
           +  +    N+A  L++ L    A  +     G L +  + P +            L    
Sbjct: 177 LALSKAGDNEATRLRLDLDSAAAGSVASSFDGTLAFENRVPRF---------AGALALGA 227

Query: 265 LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
                 R++    +       ++ +L S    +      +  ++      L  + +  + 
Sbjct: 228 ADEMPWRITARTTLDPSGAAFTQGQLLSGTEATGLKLAGEGALAFKPA-KLRVALSAPQL 286

Query: 325 MHDLNETDFFEEEEKKNK 342
             D    +      K   
Sbjct: 287 DLDRALAENKTLHGKTPA 304


>gi|283787833|ref|YP_003367698.1| outer membrane assembly protein [Citrobacter rodentium ICC168]
 gi|282951287|emb|CBG90982.1| putative outer membrane assembly protein [Citrobacter rodentium
           ICC168]
          Length = 689

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 43/402 (10%), Positives = 108/402 (26%), Gaps = 41/402 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           +++  +   F +++V    +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KIIAAVTGTFLLLIVVLIVLIATFDWNWLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +D+ +    D        +  +      L LLS  + +  + + +
Sbjct: 71  ETGWRSWVPWPHVHAEDVILGNPPDIPQVTMVHLPRVEATLAPLALLSKTVWLPWIKLVK 130

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 131 PDARLIRLSEKNNNWTFDLAEDENKDPNAQPSSWSFRLDNILFDQGRIAIDDKVSKADLE 190

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS--VIAEGTGNFDNKRSAFKITAN--FPAKNKAI 217
           +    L     F  +       +         +  G ++ +  +           +++  
Sbjct: 191 ILVDPLGKPLPFSEVTGSKGEKANVEDYVFGLKAKGRYNGEPLSGTGKIGGMLALRSEES 250

Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS------- 270
              +Q    +    +   G +    K          +GD    L                
Sbjct: 251 PFPVQADFRSGNTRVAFAGVVNDPMKMGGVDLQLKFSGDSLAELYDLTGVLLPDTPPFET 310

Query: 271 --RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH 326
             RL         +V     +  +    +           +       L       +   
Sbjct: 311 DGRLVAKIDAEKSSVFDYRGFNGRIGDSD----IHGSLTYTTGKPRPKLEGDLESKQLRL 366

Query: 327 DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
                    +  K  +     +        +  +K   +D+ 
Sbjct: 367 ADLGPLIGVDSGKGAEQSKRSEQKKGEKNVQPADKVLPYDRF 408


>gi|221638407|ref|YP_002524669.1| AsmA family protein [Rhodobacter sphaeroides KD131]
 gi|221159188|gb|ACM00168.1| AsmA family protein precursor [Rhodobacter sphaeroides KD131]
          Length = 662

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/346 (12%), Positives = 105/346 (30%), Gaps = 25/346 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R ++     LF +         + +      E   R+     G+ + + G ++  I P 
Sbjct: 3   MRWLVRLAAVLFGLA-ALFLVALVLMPRERVAELAAREFEAATGRALTISGDVRPSIWPR 61

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V    + +            +   L +  + L L+SG  R+  + +++P +     ++
Sbjct: 62  LGVRTGPVTVANAPWTDEGPMLEARSLEIGLDTLALMSGAWRISRIALEEPVIRLERDAE 121

Query: 120 GVSNWFQRKST-------------------MDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           G +NW                                 L++  V GGR+  ID+ +    
Sbjct: 122 GRANWDLSPPPRGTEAAAAEGQAGPAPASAQAGFPLFSLDEGLVTGGRVLWIDRAAGLRT 181

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            +S L++++S       + L++            G      ++       P +   ++  
Sbjct: 182 EISGLDMRVSLPEAGGPADLTLSGQANGHGFAVEGRLAEAGTSLAGRVA-PVRLSLVTGA 240

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280
            ++                 +        + ++ G     L   L  ++  L+G   +++
Sbjct: 241 ARIGFDGEAGSAPPMAEGTIDAALGDLGDLAALFGQDRPTLPEGLGRRQIALTGGLTLAE 300

Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
           G       +   +  + +        + Q E   L  +        
Sbjct: 301 GG--TLHLRNGQVTADGNRLAVEADLIPQGERPKLEANLRAETLNL 344


>gi|308188830|ref|YP_003932961.1| hypothetical protein Pvag_3375 [Pantoea vagans C9-1]
 gi|308059340|gb|ADO11512.1| Uncharacterized protein yhjG [Pantoea vagans C9-1]
          Length = 686

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 52/384 (13%), Positives = 108/384 (28%), Gaps = 41/384 (10%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + I              +P+P V  +DI +  
Sbjct: 28  TFDWNRLKPTINQKVSAELNRPFAIRGDLGIDWARNRDEAGWRRWVPWPQVHAEDIMLGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------ 125
             D        ++ +      L LL  E+ +  + + +P      ++   +NW       
Sbjct: 88  PPDIPDVTMVHLQRVDATLSPLSLLHKELFIPWIKLQRPDARLIQTADKKNNWTFTLAES 147

Query: 126 --QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
               KS      +  L+ I    G+I+  D  +     +    L     +  I       
Sbjct: 148 DKDEKSAAPSAWSFRLDNILFDQGQIRYRDAVNRADVTVQVNALGKPVPYAQIAGGDDQQ 207

Query: 184 SIKGSVI--AEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
              G  +   + +G ++N++             +++     IQ         + + G L 
Sbjct: 208 KGAGDFVFGWKASGTYNNEKLTGDGKIGGMLSLRSQNTPFPIQADVRNGSTRVQVTGGLQ 267

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYK 289
                   +     AGD    L                   L   F    G V R  ++ 
Sbjct: 268 DPMNLGGLNVRLRFAGDTLANLYGLTGVLLPDTPPYETDGHLIAKFNGEKGAVYRYEKFN 327

Query: 290 LQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
                 +           +Q      L       +            +  K ++     K
Sbjct: 328 GHIGDSD----IHGSLIYTQGKPRPTLTGELTSEQLRMADLGPLIGVDSGKGSEKTAQAK 383

Query: 349 DDIQYSVNKKEEKDNSHDKENQEN 372
                  N+  ++   HDK   +N
Sbjct: 384 ARRGEKSNQPADRVLPHDKFETKN 407


>gi|192292997|ref|YP_001993602.1| AsmA family protein [Rhodopseudomonas palustris TIE-1]
 gi|192286746|gb|ACF03127.1| AsmA family protein [Rhodopseudomonas palustris TIE-1]
          Length = 648

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 55/342 (16%), Positives = 114/342 (33%), Gaps = 32/342 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R+ + +  L +  + GAF + L ID    R+  E+Q     G ++ V G I + I P 
Sbjct: 5   IKRLGVSVAVLIAAAVTGAFALSLTIDRGALRQAVEQQLRAATGLQLVVDGDIDVTIFPR 64

Query: 62  PSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            +V F ++R+   E   G     ++ L      LPLL     + D+ ++QP ++    + 
Sbjct: 65  STVTFSNVRLKSDEDGGGDAALSVKTLITNLRLLPLLLRRFEIADVMLNQPSIHVVRDAG 124

Query: 120 GVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
           G SNW        R     +   V   +I ++ G +   D+ +     + D++L ++   
Sbjct: 125 GRSNWTPFIDSLTRTMKPGLDDQVSFSEIRLQDGELSYRDETAGVQEHIDDIDLSLAWPS 184

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
           ++        +  G     G    D   +     A        I L++       P+ I 
Sbjct: 185 ISRTF-----AATGQFDFRGE-RLDGSITVADFIAALRGDTSGIKLRLA----GAPMKIA 234

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRI 285
             G +  N+      G  S      +        +           L     +   ++ +
Sbjct: 235 FDGTIA-NKTSLSLIGTVSADSASLRNALRWAGQEPPGTGGFGRFALKARANLIGASIAL 293

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQ-DEENLLNFSENGAESMH 326
           +   ++          +     +       L  +        
Sbjct: 294 TNVNVEL----DKNVAEGVMTYTLAGGHQGLQATLAAGSIDV 331


>gi|331012117|gb|EGH92173.1| AsmA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 741

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 46/434 (10%), Positives = 122/434 (28%), Gaps = 77/434 (17%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   D  +          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120

Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAVASTETSGETTPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204
           D    + +    + L           P+ + +        ++      G    D     +
Sbjct: 181 DARKGRTFMAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240

Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN-------------------- 241
           +      +     + +  K   F     +++DL  N+                       
Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWKSLKVSANQLRALGELRARD 300

Query: 242 -EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290
            +K P  SG  S+A    +     +      +S               +  ++ +    L
Sbjct: 301 LDKTPQISGGLSIAQLDLRTFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348
           +       +    +  V    +  L     G     D       EE +  K  +  +++ 
Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARKSEVQS 416

Query: 349 DDIQYSVNKKEEKD 362
            +   +       +
Sbjct: 417 GEAAAAAGDSPLPE 430


>gi|320331776|gb|EFW87714.1| AsmA family protein [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 741

 Score =  123 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   D  +          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLALHR 120

Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAVATTAAPGEPAPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204
           D    + +    + L           P+ + +        ++      G    D     +
Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240

Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244
           +      +     + +  K   F     +++DL  N+                       
Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300

Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290
               P  SG  S+A    +     +      +S               +  ++ +    L
Sbjct: 301 LDKTPQISGGLSIAQLDLRTFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348
           +       +    +  V    +  L     G     D       EE +  K  +  +++ 
Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARKSEVQS 416

Query: 349 DDIQYSVNKKEEKD 362
            +   +       +
Sbjct: 417 GEAAAAAGDSPLPE 430


>gi|71735454|ref|YP_277019.1| AsmA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71556007|gb|AAZ35218.1| AsmA family superfamily [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 741

 Score =  123 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   D  +          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLALHR 120

Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAVATTAAPGEPAPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204
           D    + +    + L           P+ + +        ++      G    D     +
Sbjct: 181 DARKGRTFTAESIQLSTGPIRETSDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240

Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244
           +      +     + +  K   F     +++DL  N+                       
Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300

Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290
               P  SG  S+A    +     +      +S               +  ++ +    L
Sbjct: 301 LDKTPQISGGLSIAQLDLRTFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348
           +       +    +  V    +  L     G     D       EE +  K  +  +++ 
Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARKSEVQS 416

Query: 349 DDIQYSVNKKEEKD 362
            +   +       +
Sbjct: 417 GEAAAAAGDSPLPE 430


>gi|108755245|emb|CAK32565.1| AsmA protein [uncultured organism]
          Length = 684

 Score =  123 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 45/330 (13%), Positives = 100/330 (30%), Gaps = 35/330 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FE 80
           +   +D+ + R   E +A    G+++ + G I + I   P++  +D+R      GS    
Sbjct: 26  ILSTMDFEELRGIIEAEAKEATGRELKIAGPIDLKISLTPAIAVEDVRFANAAWGSRADM 85

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF----------QRKST 130
             I    +    LPLLSG+I+V  + + +P +      +G  NW             ++ 
Sbjct: 86  ISIRRFELEVALLPLLSGDIQVKRLVLIEPDILLETDQEGRGNWQMTGAAETGEKDGEAE 145

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
            +       +++ ++   +   + ++ +   L    L+  A            S    + 
Sbjct: 146 GEDAPLPSFDQVVIRDATLTYKNGKTGEEIRLRLARLEGRA-----------ASSSSPLE 194

Query: 191 AEGTGNFDNKRSAFKITANFP-AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
               G +++     + T              ++L   A    + + G +           
Sbjct: 195 VALEGAYNDAPFKVEGTLGSFEQLLGEGPFPVKLSVEAGGATVTVDGRIAEPMTGRGLDL 254

Query: 250 VFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
              V G     L     A+        LS          +++    +    +        
Sbjct: 255 KIQVRGQSLADLGALGGAELPPLGPYDLSVQVVQEGTTYKLTGLTAKVGSSD----IAGN 310

Query: 305 TKVSQDEE-NLLNFSENGAESMH-DLNETD 332
             V+       +N +         D    D
Sbjct: 311 ATVAFGGARPAVNGAFTAGTLNIQDFTPPD 340


>gi|298489307|ref|ZP_07007322.1| A/G-specific adenine glycosylase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298156158|gb|EFH97263.1| A/G-specific adenine glycosylase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 741

 Score =  123 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   D  +          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLALHR 120

Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAVATTAAPGEPTPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204
           D    + +    + L           P+ + +        ++      G    D     +
Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240

Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244
           +      +     + +  K   F     +++DL  N+                       
Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300

Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290
               P  SG  S+A    +     +      +S               +  ++ +    L
Sbjct: 301 LDKTPQISGGLSIAQLDLRTFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348
           +       +    +  V    +  L     G     D       EE +  K  +  +++ 
Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARKSEVQS 416

Query: 349 DDIQYSVNKKEEKD 362
            +   +       +
Sbjct: 417 GEAAAAAGDSPLPE 430


>gi|289624102|ref|ZP_06457056.1| AsmA family protein [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
          Length = 741

 Score =  123 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   D  +          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLALHR 120

Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAVATTAAPGEPTPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204
           D    + +    + L           P+ + +        ++      G    D     +
Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240

Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244
           +      +     + +  K   F     +++DL  N+                       
Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300

Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290
               P  SG  S+A    +     +      +S               +  ++ +    L
Sbjct: 301 LDKTPQISGGLSIAQLDLRTFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348
           +       +    +  V    +  L     G     D       EE +  K  +  +++ 
Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARKSEVQS 416

Query: 349 DDIQYSVNKKEEKD 362
            +   +       +
Sbjct: 417 GEAAAAAGDSPLPE 430


>gi|220920739|ref|YP_002496040.1| hypothetical protein Mnod_0705 [Methylobacterium nodulans ORS 2060]
 gi|219945345|gb|ACL55737.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
          Length = 1174

 Score =  123 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 49/334 (14%), Positives = 98/334 (29%), Gaps = 27/334 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R +L  L  L  ++LV A  VP F++W   R   +      +G +    G ++I  LP 
Sbjct: 1   MRDILTALAGLVILILVAALVVPPFVNWEGQRAAVDAALARSLGVEARSDGRLEIRFLPS 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P +    + + +   G        +       PLLSGEIR  +  I +  +   ++  G 
Sbjct: 61  PRLRIDHLVLGRP--GRPALDARFVKAEIALTPLLSGEIRFTETKIGRAEVTVPVTEGGA 118

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                         ++ +E + V       +   + +                     L+
Sbjct: 119 LIVPPDFGAALGGRDLAVEDLRVSQLLFTTLVPATGRTDQFY-----------AESVRLA 167

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
              + G    EG          F++    P    A+ +K+       P  +++   +   
Sbjct: 168 APRLAGPWRVEGDAG----ALPFRLVTGAPTAVGAVPVKVTAGGDTAP-KLEIDARVSLA 222

Query: 242 EK-----QPIYSGVFSVA---GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
                   P  +G   +        +            L G+FK            L+  
Sbjct: 223 GDPARGFAPEATGTARLVVGPPPRPEGAQAAGPMTPFSLQGSFKARGRVAAFEGLTLEVE 282

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
              +      +  +     N    + +      D
Sbjct: 283 GGGAPLRLSGRGTLDLPSLNA-ALALDARRLDLD 315


>gi|46579228|ref|YP_010036.1| AsmA family protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|46448642|gb|AAS95295.1| AsmA family protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233059|gb|ADP85913.1| AsmA family protein [Desulfovibrio vulgaris RCH1]
          Length = 701

 Score =  123 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 50/390 (12%), Positives = 112/390 (28%), Gaps = 67/390 (17%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           ++R  L     + +++L       L  D    R         + G+ +++ G + + + P
Sbjct: 4   LMRFALFTFAAIIAIILFVVMAARLAFDPEALRNRAATALAEVTGRSVSISGPVTLGLWP 63

Query: 61  FPSVFFKDIRIDQKEDG---SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
             +V F+ + +   E     S    I         +PL S  +    + ++  H+N    
Sbjct: 64  RLAVDFEGLAVAPPEGFADASPLLTIGKADASLRIIPLFSRRMEFDHIRLEGLHINLVRD 123

Query: 118 SKGVSNW--------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD 157
           + G  NW                                  L+++ +    + + D  + 
Sbjct: 124 ADGNGNWTPPAGRPIPPPVPSEKDSGATPSAMPDVPRPAFSLQRLELADATLSLRDIATG 183

Query: 158 QVYFLSDLNLQISARFLNIISPLSIDSIKG---------------SVIAEGTGNFDNKRS 202
           +     D++           +      + G               +  A+G+ + +    
Sbjct: 184 ESIRARDIDFVADFDAEGKAAVGLSLVLAGERPTFSTGLALDATVTPRADGSVSLELAPL 243

Query: 203 AFKITAN-FPAKNKAISLKIQLFPLAY----PIIIDLFG-NLFWNEKQPIYSGVFSVAGD 256
           A    +   PA      L+ +L  +      P  + + G NL          G  S A +
Sbjct: 244 AITPHSGVIPAAVGQTQLRGRLNIIPAKEGQPARLTIEGMNLTAPFMTATVDGSLSAARE 303

Query: 257 FSKLLNLELS-------------------AKKSRLSGNFKISDGNVRISRYKLQSILPNS 297
            S    LE S                     K+   G+  ++   +++S    +      
Sbjct: 304 ASLSFALEGSPRKGLAAFGILLDTRATDALDKATAKGDVNVAGQKLQLSGMDARI----D 359

Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHD 327
           ST       +    +  +  +    +   D
Sbjct: 360 STTFKGDVLIPLSGDTPVKGTVALGDIDID 389


>gi|157375122|ref|YP_001473722.1| AsmA family protein [Shewanella sediminis HAW-EB3]
 gi|157317496|gb|ABV36594.1| AsmA family protein [Shewanella sediminis HAW-EB3]
          Length = 611

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 35/337 (10%), Positives = 102/337 (30%), Gaps = 27/337 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +       F +++  A  + L  D  DF+           G+ + V   +     P 
Sbjct: 5   MKILKWFFVVFFILIISLAAYLTLVFDPNDFKPQLVDAVKENTGRDLVVADKLSWTFFPS 64

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    + +            ++  +      +PL S ++ +  + +D   +N      
Sbjct: 65  IGIKLSKVSLSNPSGFDTSSMLEVNEIVAEVALMPLFSKQVEIAQLNVDGLTVNLETRID 124

Query: 120 GVSNWF--------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
           G +++                   +   +  + +  + +   +I+++D+++      +  
Sbjct: 125 GQTSFDGLEGSKSAGKPAAEPSSQSGKGLAGLNIGGVAITNTQIRMLDEKTGTEQLFNLE 184

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLKIQLF 224
            L +    L   +PL             + + +   +    + A      K ++      
Sbjct: 185 KLTLGQFALGEFAPLEYQFNAELPDMTLSSHGEGLIKVDASMQAIELKDLKILNSVAGEG 244

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA----KKSRLSGNFKISD 280
                + I L   +     +                   E+S     K   + G      
Sbjct: 245 IPNKKLDISLLTQVSIALDKKRLKLSLEEFIADQIEAKGEVSVAYGGKVPNIDGQLSF-- 302

Query: 281 GNVRISRYKLQSILPNSSTDEDNK-TKVSQDEENLLN 316
           G + + ++       ++ +  D+K T+ +  +E  L+
Sbjct: 303 GEIDLDKF---MPPSDAPSQSDDKQTQATSAQEPDLS 336


>gi|331014648|gb|EGH94704.1| hypothetical protein PLA106_02055 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 688

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 41/380 (10%), Positives = 98/380 (25%), Gaps = 43/380 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH----- 57
           R++    G    +VL     V +  DW   +     + +  + +  A+ G + +      
Sbjct: 5   RKIFAWTGTTLLLVLAVLVIVIVTFDWNRIKPTLNEKVSGALHRPFAINGDLDVRWTREP 64

Query: 58  -------ILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P P     D+ +             ++ +  R   LPLL  ++ +  + + 
Sbjct: 65  ELGGWRAWVPSPHFVADDLTLGNPGWSKTPQMFNLKHVEFRLSLLPLLVQQVVIPRIDLT 124

Query: 109 QPHLNFYLSSKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            P       + G +NW         +       + +  I    G +   DQ  +    + 
Sbjct: 125 GPEAKLERLADGRANWVFDLPKSDPNAEPSKWVIDIGAIKFDKGLVSFNDQTLNANLDVV 184

Query: 164 --------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAK 213
                     +  + ++               +      G +  ++ +           K
Sbjct: 185 IDMLGKPIPFSEIVGSKEAQKAQEKGAVPQDYAFGLAVKGQYHGQKLSGTGKIGGLLALK 244

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
           + +    +Q           + G L   +          ++G     L            
Sbjct: 245 DASQPFPVQADVKIGDTHAVIAGTLTDPQNLGALDLRLKLSGASLSNLYPLTGVTLPDSP 304

Query: 271 ------RLSGNF-KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FSENGA 322
                 RL       +  N R   +  +    +   D      ++      L+    +  
Sbjct: 305 AYSTDGRLVAKLHDPAGANFRYEGFNGKIGNSDIHGDL---GYLASQPRPKLSGVLVSNQ 361

Query: 323 ESMHDLNETDFFEEEEKKNK 342
               DL      +    + K
Sbjct: 362 LLFSDLAPLIGADSNAAQKK 381


>gi|83953521|ref|ZP_00962243.1| AsmA family protein [Sulfitobacter sp. NAS-14.1]
 gi|83842489|gb|EAP81657.1| AsmA family protein [Sulfitobacter sp. NAS-14.1]
          Length = 647

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 29/387 (7%), Positives = 103/387 (26%), Gaps = 26/387 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ ++  +G L  +++V   ++   +           Q   + G+++ + G + +   P 
Sbjct: 1   MKWIIRAIGILLLILVVAVGSL-FLLPADRIARIAADQLRNLTGREVTITGDVGLTFWPV 59

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V    + +   +             ++  + + L+ GEI++ ++    P +       
Sbjct: 60  LGVTAGGLEVGNADWAKDGAMLSAANAAIGVDAMALIRGEIKITNIEAQSPTIRLEQRRD 119

Query: 120 GVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
           G ++W                +       + ++++ +    +   D E   +     ++L
Sbjct: 120 GRASWQFSDGGGEAAIETAPTAPARSPRPLTIQRLDITDATLIY-DAEGSDLVRFDGVDL 178

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
            +        + +       +         +     F    N   +     +  +   ++
Sbjct: 179 SLDWPERAGDAVIKAALRPAADRVSIEATIN----RFDQFLNGDIRPLRARVDTKGGGVS 234

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-LSGNFKIS-DGNVRI 285
                 L G +  +           +A      + L     K+  ++ +  ++ D  + +
Sbjct: 235 LTGRAGLAGAVAGDLWLKTSDTGRFLAALGVGDIALPQGLGKTADINLDLTLTPDRRLAL 294

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
                                ++ +    +N   N                    +    
Sbjct: 295 REVVADLG----GNALTGAADITLNGTPDVNAQINVGALDLTGFAGSAPSGTAPASTTPA 350

Query: 346 LKKDDIQYSVNKKEEKDNSHDKENQEN 372
                            ++ + E    
Sbjct: 351 PASPTGWSKAPIDASALSAFNGEVALR 377


>gi|28872453|ref|NP_795072.1| hypothetical protein PSPTO_5341 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28855708|gb|AAO58767.1| conserved protein of unknown function [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 741

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 44/434 (10%), Positives = 119/434 (27%), Gaps = 77/434 (17%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLDGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   +  +          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELHEAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120

Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAVATTGTPGEATPAPAPDAAKPDRPSQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204
           D    + +    + L           P+ + +        ++      G    D     +
Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRTKTELVGQLRMDRVLKRY 240

Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244
           +      +     + +  K+  F     +++DL  N+                       
Sbjct: 241 QFEDMRLSGEVAGEPLQGKLVTFSAQGQLLVDLTANIAEWNSLKISANQLRALGELRARD 300

Query: 245 ----PIYSGVFSVAGDFSKL----------LNLELSAKKSRLSGNFKISDGNVRISRYKL 290
               P  SG  S+A    +              E +  K  +      +  ++ +    L
Sbjct: 301 LDKTPQISGGLSIASLDLRAFFENIGQPLPAMAEGALSKVEMVTRLSGTPTSLALENLNL 360

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348
           +       +    +  V       L           D       EE +  K  +  +++ 
Sbjct: 361 KV----DDSTFTGRIAVDDFARQALRVQLKADTFDADRYRPAESEESKGAKAARKSEVQS 416

Query: 349 DDIQYSVNKKEEKD 362
            +           +
Sbjct: 417 GEAAAVAGDSPLPE 430


>gi|330967498|gb|EGH67758.1| AsmA family protein [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 741

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 44/434 (10%), Positives = 119/434 (27%), Gaps = 77/434 (17%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLDGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   +  +          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELHEAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120

Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAVATTGTPGEATPAPAPDAAKPDRPSQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204
           D    + +    + L           P+ + +        ++      G    D     +
Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRTKTELVGQLRMDRVLKRY 240

Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244
           +      +     + +  K+  F     +++DL  N+                       
Sbjct: 241 QFEDMRLSGEVAGEPLQGKLVTFSAQGQLLVDLTANIAEWNSLKISANQLRALGELRARD 300

Query: 245 ----PIYSGVFSVAGDFSKL----------LNLELSAKKSRLSGNFKISDGNVRISRYKL 290
               P  SG  S+A    +              E +  K  +      +  ++ +    L
Sbjct: 301 LDKTPQISGGLSIAPLDLRAFFENIGQPLPAMAEGALSKVEMVTRLSGTPTSLALENLNL 360

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348
           +       +    +  V       L           D       EE +  K  +  +++ 
Sbjct: 361 KV----DDSTFTGRIAVDDFARQALRVQLKADTFDVDRYRPAESEESKGAKAARKSEVQS 416

Query: 349 DDIQYSVNKKEEKD 362
            +           +
Sbjct: 417 GEAAAVAGDSPLPE 430


>gi|302187482|ref|ZP_07264155.1| AsmA family protein [Pseudomonas syringae pv. syringae 642]
          Length = 741

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   D  +          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120

Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAVASTETPGEPTPAPAPDAPKTDRPSQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204
           D    + +    + L           P+ + +        ++      G    D     +
Sbjct: 181 DARKGRTFMAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240

Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244
           +      +     + +  K   F     +++DL  N+                       
Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300

Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290
               P  SG  S+A    +     +      +S               +  ++ +    L
Sbjct: 301 LDKTPQISGGLSIAQLDLRAFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALDNLNL 360

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348
           +       +    +  V    +  L     G     D       EE +  K  +  +++ 
Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKSAKAARKSEVQS 416

Query: 349 DDIQYSVNKKEEKD 362
            +   +       +
Sbjct: 417 GEAAAAAGDSPLPE 430


>gi|237808080|ref|YP_002892520.1| AsmA family protein [Tolumonas auensis DSM 9187]
 gi|237500341|gb|ACQ92934.1| AsmA family protein [Tolumonas auensis DSM 9187]
          Length = 751

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 54/346 (15%), Positives = 111/346 (32%), Gaps = 30/346 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           +  L  +G + +++  GA  V    D    +   E        + +   G + + + P P
Sbjct: 6   KYSLYSVGAVVALIAGGAVYVTATFDANSLKPRLESLVKAEKQRTLKFNGPLSLSLFPKP 65

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            +   D+ + ++   +  + I    +  +F PLLS +I + ++ +    +N   +  G  
Sbjct: 66  GITVSDVSLSERNSDTQFAHITDARLVMQFWPLLSKKIVIDEVDVQGATINLLRNKTGQY 125

Query: 123 NWFQRKST----------------------MDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           N+                                    L + ++    IK +DQ+S Q  
Sbjct: 126 NFADLMENGKKSAIKETIPEIATDSETTTGASPATGFRLSQFNIAKSSIKYVDQQSGQQL 185

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            LSDL+L      +     +   S   S         + K        NF  K   + L 
Sbjct: 186 MLSDLSLFGDGITVAGAEHIDFSSRLQSPSPALDLRINTKL----DRLNFDQKTGQLLLD 241

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280
                +      D    L      P      + A   + +++  LS    ++  NFK+  
Sbjct: 242 GLHNVVDGKADKDA---LKLTLTAPKLFIKDNAATADTMVISALLSGAARKVDANFKLDG 298

Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
            +    ++K +++  +  T       V     + +NF         
Sbjct: 299 VSGDSQQFKARALKLDL-TANQGDQAVKMAVNSPVNFKLATQTLNL 343


>gi|332750204|gb|EGJ80615.1| asmA family protein [Shigella flexneri 4343-70]
          Length = 671

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/392 (12%), Positives = 110/392 (28%), Gaps = 38/392 (9%)

Query: 15  VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFP 62
           +++V A  +    DW   +    ++ +  + +  A++G + +              +P+P
Sbjct: 2   LLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGNLGVVWERQKQETGWRSWVPWP 61

Query: 63  SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            V  +DI +    D        +  +      L LL+  + +  + +++P       S+ 
Sbjct: 62  HVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEKPDARLIRLSEK 121

Query: 121 VSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
            +NW            +      +  L+ I    GRI I D+ S     +    L     
Sbjct: 122 NNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLP 181

Query: 173 FLNIISPLSIDSIKGS----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPL 226
           F  +         +         +  G ++ +              + +     +Q    
Sbjct: 182 FSEVTGSKGKADKEKVGDYIFGLKAQGRYNGEPLTGTGKIGGMLALRGEGTPFPVQADFR 241

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNF--KIS 279
           +    +   G +    K          +GD    L                 G    KI 
Sbjct: 242 SGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKID 301

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-DLNETDFFEEEE 338
                +  Y+  +     S    +    +      L       +    DL      +  +
Sbjct: 302 TEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGK 361

Query: 339 K--KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
              K+K  + KK +       K    +  + +
Sbjct: 362 GAEKSKRSEQKKGEKSVQPAGKVLPYDRFETD 393


>gi|261342004|ref|ZP_05969862.1| AsmA family protein [Enterobacter cancerogenus ATCC 35316]
 gi|288315920|gb|EFC54858.1| AsmA family protein [Enterobacter cancerogenus ATCC 35316]
          Length = 680

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/385 (12%), Positives = 105/385 (27%), Gaps = 43/385 (11%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           RV+     +F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   RVIAWTAGIFLLLIVVAIIIIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKE 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V   DI +    D        +  +      L LL+  + +  + + Q
Sbjct: 66  ETGWRSWVPWPHVHADDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVYLPWIKLQQ 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLASSEEKDPNAQPSAWSFRLDNILFDRGRIAIDDKVSKADVE 185

Query: 162 LSDLNLQISARFLNIISP----LSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +    L     F  +           +          G ++ +    K         +++
Sbjct: 186 ILVDPLGKPLPFSEVTGSKAKGDKAKAGDYVFGLTAKGRYNGQPLTGKGKIGGMLALRSE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS----- 270
                +Q    +    +   G +    K          AGD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFVGTVNDPMKMGGVDLQLKFAGDSLGELYDLTGVLLPDTPPF 305

Query: 271 ----RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES 324
                L         +V     +  +    +           +       L       + 
Sbjct: 306 ETDGHLVAKIDTEKSSVFDYRDFNGRIGDSD----IHGSLTYTTGKPRPKLEGDMESRQL 361

Query: 325 MHDLNETDFFEEEEKKNKNDDLKKD 349
                      +  K  K+ ++KKD
Sbjct: 362 RLADLGPLIGVDSGKGTKSKEVKKD 386


>gi|188535491|ref|YP_001909288.1| Conserved hypothetical protein YhjG [Erwinia tasmaniensis Et1/99]
 gi|188030533|emb|CAO98428.1| Conserved hypothetical protein YhjG [Erwinia tasmaniensis Et1/99]
          Length = 685

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/412 (12%), Positives = 123/412 (29%), Gaps = 42/412 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           +V+  +G +F +++V    V  + DW   +    R+ +  + +  A++G + ++      
Sbjct: 6   KVIGSIGGIFLLLVVVIVAVVAWFDWNRLKPTLNRKVSTEINRPFAIRGDLGVNWQRNRT 65

Query: 58  ------ILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    +        +E +      L LLS +I +  + + Q
Sbjct: 66  EPGWRGWVPWPQVHAEDIMLGNPPNVPDVTMIHLERIDATISPLALLSQQIYLPWIKLQQ 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQV 159
             +    ++ G +NW          + S      +  L+ +    G I   D   ++D  
Sbjct: 126 LQVKLVQNADGKNNWTFDLADSDGEKASQAPSAWSFRLDNVAFDRGTISYRDAINKADVQ 185

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAI 217
             +  L   +    L         +         +G ++N++   +         +++  
Sbjct: 186 VVVDPLGKPVPYAQLAGGDDKQKGAADFVFGWRASGTYNNEKLTGEGKIGGMLSLRSQNT 245

Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS------- 270
              +          + + G +               +GD    L                
Sbjct: 246 PFPVAADVRNGTTRVRVAGTVQDPMDLGGMDLRLRFSGDTLANLYGLTGVLLPDTPPYET 305

Query: 271 --RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES-MH 326
              L+  F+   G V     +       +             D    L  S    +  M 
Sbjct: 306 DGHLTARFQQPGGAVFHYKNFNGHIGDSDIRGSL---AYAQGDRRPKLEGSLESLQLRMA 362

Query: 327 DLNETDFFEEEEKKNKNDDLK--KDDIQYSVNKKEEKDNSHDKENQENFSGD 376
           DL         +   K    K  + +       +    ++ D ++ +    D
Sbjct: 363 DLGPLIGVNSGKDSAKTARAKAQRGEKSMQPAGRVLPHDTFDTQSWQAMDAD 414


>gi|315618445|gb|EFU99032.1| asmA family protein [Escherichia coli 3431]
          Length = 669

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/390 (12%), Positives = 107/390 (27%), Gaps = 38/390 (9%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSV 64
           +V A  +    DW   +    ++ +  + +  A++G + +              +P+P V
Sbjct: 2   IVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHV 61

Query: 65  FFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
             +DI +    D        +  +      L LL+  + +  + +++P       S+  +
Sbjct: 62  HAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEKPDARLIRLSEKNN 121

Query: 123 NWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLNLQIS 170
           NW            +      +  L+ I    GRI I D+ S     +        L  S
Sbjct: 122 NWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFS 181

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAY 228
               +                +  G ++ +              + +     +Q    + 
Sbjct: 182 EVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGEGTPFPVQADFRSG 241

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNF--KISDG 281
              +   G +    K          +GD    L                 G    KI   
Sbjct: 242 NTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKIDTE 301

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-DLNETDFFEEEEK- 339
              +  Y+  +     S    +    +      L       +    DL      +  +  
Sbjct: 302 KSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGA 361

Query: 340 -KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
            K+K  + KK +       K    +  + +
Sbjct: 362 EKSKRSEQKKGEKSVQPAGKVLPYDRFETD 391


>gi|330874226|gb|EGH08375.1| AsmA family protein [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 741

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLDGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   + R+          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELHEARVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120

Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAVATTGTPGEATPAPAPDAAKPDRPSQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204
           D    + +    + L           P+ + +        ++      G    D     +
Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRTKTELVGQLRMDRVLKRY 240

Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244
           +      +     + +  K+  F     +++DL  N+                       
Sbjct: 241 QFEDMRLSGEVAGEPLQGKLVTFSAQGQLLVDLTANIAEWNSLKISANQLRALGELRARD 300

Query: 245 ----PIYSGVFSVAGDFSKL----------LNLELSAKKSRLSGNFKISDGNVRISRYKL 290
               P  SG  S+A    +              E +  K  +      +  ++ +    L
Sbjct: 301 LDKTPQISGGLSIAPLDLRAFFENIGQPLPAMAEGALSKVEMVTRLSGTPTSLALENLNL 360

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348
           +       +    +  V       L           D       EE +  K  +  +++ 
Sbjct: 361 KV----DDSTFTGRIAVDDFARQALRVQLKADTFDADRYRPAESEESKGAKAARKSEVQS 416

Query: 349 DDIQYSVNKKEEKD 362
            +           +
Sbjct: 417 GEAAAVAGDSPLPE 430


>gi|330987175|gb|EGH85278.1| AsmA family protein [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 741

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/434 (10%), Positives = 119/434 (27%), Gaps = 77/434 (17%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   D  +          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLALHR 120

Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAVATTTAPGEPTPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204
           D    + +    + L           P+ + +        ++      G    D     +
Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240

Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244
           +      +     + +  K   F     ++ DL  N+                       
Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLADLAANIAEWNSLKVSANQLRALGELRARD 300

Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290
               P  SG  S+A    +     +      +S               +  ++ +    L
Sbjct: 301 LDKTPQISGGLSIAQLDLRTFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348
           +       +    +  V    +  L     G     D       EE +  K  +  +++ 
Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGVKAARKSEVQS 416

Query: 349 DDIQYSVNKKEEKD 362
            +   +       +
Sbjct: 417 GEAAAAAGDSPLPE 430


>gi|329909968|ref|ZP_08275156.1| hypothetical protein IMCC9480_7 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327546352|gb|EGF31368.1| hypothetical protein IMCC9480_7 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 671

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/350 (12%), Positives = 103/350 (29%), Gaps = 34/350 (9%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHI------------LPFPSVFFKDIRIDQK 74
            DW   R     + +  +G+  A++G + +              LP+P +   D+ I   
Sbjct: 29  WDWNRSRPWLNDKVSQAIGRDFAIRGQLGLSWHRPPGGTGWRGYLPWPRLTASDVVIGNP 88

Query: 75  EDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST-M 131
                   + ++ +      LPLL  +I +  + +  P ++    + G  NW     +  
Sbjct: 89  VWARQPALASLDRIEFDIALLPLLRQQIAIPSIALVNPAIDLERRADGSVNWSFAPQSAS 148

Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS--- 188
                + LE+I+   G I + D +  ++  ++ +    +A  +  +   +  +  G    
Sbjct: 149 SSAWTLKLERINFASGTIALTD-QLKKIDAIATIRPAGNAVEVGALLDKNAPAGAGPAYG 207

Query: 189 --VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
                 GT N    +   +        + +    +Q         I + G +        
Sbjct: 208 FAFDIAGTYNKAVVKGNGRFGGVLSLVDASQPFPLQTDLRVGDNHIVIDGTITDPGNLAA 267

Query: 247 YSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNS 297
                 +A      L                   L+G  + +D   R  ++  +    + 
Sbjct: 268 LDLQLQLASGSMAHLYELTGVALPDTPPFSTSGHLTGRLRKADSLFRYEKFSGKVGGSDL 327

Query: 298 STDEDNKTKVSQDEENLLNFSENG-AESMHDLNETDFFEEEEKKNKNDDL 346
           +   +     +      L            DL       + +    +  L
Sbjct: 328 AGTLE---YSTAGARPKLVGDLRSERLLFADLAPLVGASKTDAPPADVKL 374


>gi|330970724|gb|EGH70790.1| AsmA family protein [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 741

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   D  +          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120

Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAVASTETPGETTPAPAPDAPKADRPAQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204
           D    + +    + L           P+ + +        ++      G    D     +
Sbjct: 181 DARKGRTFMAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240

Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244
           +      +     + +  K   F     +++DL  N+                       
Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300

Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290
               P  SG  S+A    +     +      +S               +  ++ +    L
Sbjct: 301 LDKTPQISGGLSIAQLDLRAFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348
           +       +    +  V    +  L     G     D       EE +  K  +  +++ 
Sbjct: 361 KV----DDSSFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARKSEVQS 416

Query: 349 DDIQYSVNKKEEKD 362
            +   +       +
Sbjct: 417 GEAAAAAGDSPLPE 430


>gi|312958437|ref|ZP_07772957.1| hypothetical protein PFWH6_0333 [Pseudomonas fluorescens WH6]
 gi|311286980|gb|EFQ65541.1| hypothetical protein PFWH6_0333 [Pseudomonas fluorescens WH6]
          Length = 738

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/389 (13%), Positives = 112/389 (28%), Gaps = 72/389 (18%)

Query: 18  VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KED 76
              F +    D  D++E+  + A      ++ + G I   + P+  +   +  +      
Sbjct: 21  ALGFALTHLFDPNDYKEEIRQIARDKAHIELTLNGDIGWSLFPWLGLELHEASVATLTAP 80

Query: 77  GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---------- 126
               + ++ L +    LPLL  E+++ D+ ++  +L      +G  NW            
Sbjct: 81  TQPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLRLTRDKQGHGNWEDIGKNVPDATA 140

Query: 127 --------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                         +         + ++ + +   RI+  D+++ + +    + L   A 
Sbjct: 141 GAPAAAPAEPVAETKPEKPAQPIRLDIDSLTINNARIEYNDEQTGKQFSAESIQLSAGAV 200

Query: 173 FLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAFKI---TANFPAKNKAISLKI 221
                 P+ + +  GS            G          ++      +  A  + +  K 
Sbjct: 201 HEGASIPVKLTAFFGSNQPVMRVKTELNGNLRIQRALKRYQFEDMRISGEATGEPLQGKT 260

Query: 222 QLFPLAYPIIIDLFGNLFWN---------------------EKQPIYSGVFSVAGDFSKL 260
             F     +++D   N+                        +K P  SG  S+A      
Sbjct: 261 VTFSTQGQLLVDQAANIAEWTNMKLSANQLRALGELKVNDLDKTPQLSGALSIAQFDLAK 320

Query: 261 ----------LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD 310
                        E S  K  L    K +  +V +    L+       +    +  V   
Sbjct: 321 FLDSIGSPLPPMAEGSLSKVELVSRLKGTPTSVALEDLNLKL----DGSTFTGRVAVDDF 376

Query: 311 EENLLNFSENGAESMHDLNETDFFEEEEK 339
            +  L     G     D N      E  K
Sbjct: 377 AKQSLRVQLKGDTFNAD-NYLPAQSESAK 404


>gi|188577324|ref|YP_001914253.1| AsmA family membrane protein [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188521776|gb|ACD59721.1| AsmA family membrane protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 342

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 84/243 (34%), Gaps = 15/243 (6%)

Query: 33  REDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRA 90
           R   ER  T   G++  + G + + +    +V  + + +           +++    +  
Sbjct: 2   RGPVERAVTAKTGREFHL-GHLDVDLGRITTVRGERLSLGNASWSKRGAMAELNAAEIDV 60

Query: 91  EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIK 150
           E  PLL G++R+ ++ ++ P L     +      +    +        L ++ V  GR++
Sbjct: 61  ELWPLLRGKLRLPEIRLEHPTLLLEAGNDSHPGNWVFDQSYSDSSMPRLGRLLVNNGRLQ 120

Query: 151 IIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF 210
            ID  S     +           +N ++P S D     +  +G G +     A K     
Sbjct: 121 YIDDASRSDVDV----------AINSLAPPSSDQRAAPISIDGKGRWKGYPFALKGNTAS 170

Query: 211 PAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268
           P +        +I L   A      + G L    +  ++    +++G     L L  S  
Sbjct: 171 PLELSQSEHPFRIDLRGSAGATRTHVRGTLTNPFQLRVFDLQMALSGQDMADLYLLASQY 230

Query: 269 KSR 271
              
Sbjct: 231 HPH 233


>gi|167619860|ref|ZP_02388491.1| AsmA family protein [Burkholderia thailandensis Bt4]
          Length = 818

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 77/239 (32%), Gaps = 35/239 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  + +V+           DW   +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIAAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      + I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETRWRAWVPWPMFSASQVVIGNPPWAKAPNFATLDEARFELALLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P L+    + G +NW    ++S+      V L       G +   D        ++  
Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSSGPSPWKVQLRDFGFAKGTVAYRDA-------ITKA 179

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
           +L ++   L    PL            G      + ++   +A    K  A  L  +  
Sbjct: 180 DLTVAVDTLGQPIPL------------GDVLRQQEETSRAASAQRVGKKGAAQLTAKAN 226


>gi|83721138|ref|YP_442789.1| AsmA family protein [Burkholderia thailandensis E264]
 gi|257139001|ref|ZP_05587263.1| AsmA family protein [Burkholderia thailandensis E264]
 gi|83654963|gb|ABC39026.1| AsmA family protein [Burkholderia thailandensis E264]
          Length = 818

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 77/239 (32%), Gaps = 35/239 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  + +V+           DW   +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIAAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      + I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETGWRAWVPWPMFSASQVVIGNPPWAKAPNFATLDEARFELALLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P L+    + G +NW    ++S+      V L       G +   D        ++  
Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSSGPSPWKVQLRDFGFAKGTVAYRDA-------ITKA 179

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
           +L ++   L    PL            G      + ++   +A    K  A  L  +  
Sbjct: 180 DLTVAVDTLGQPIPL------------GDVLRQQEETSRAASAQRVGKKGAAQLTAKAN 226


>gi|66048124|ref|YP_237965.1| AsmA [Pseudomonas syringae pv. syringae B728a]
 gi|63258831|gb|AAY39927.1| AsmA [Pseudomonas syringae pv. syringae B728a]
          Length = 741

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   D  +          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120

Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAVASTETPGETTPAAAPDAPKADRPAQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204
           D    + +    + L           P+ + +        ++      G    D     +
Sbjct: 181 DARKGRTFMAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240

Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244
           +      +     + +  K   F     +++DL  N+                       
Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300

Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290
               P  SG  S+A    +     +      +S               +  ++ +    L
Sbjct: 301 LDKTPQISGGLSIAQLDLRAFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348
           +       +    +  V    +  L     G     D       EE +  K  +  +++ 
Sbjct: 361 KV----DDSSFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARKSEVQS 416

Query: 349 DDIQYSVNKKEEKD 362
            +   +       +
Sbjct: 417 GEAAAAAGDSPLPE 430


>gi|221212809|ref|ZP_03585785.1| AsmA family protein [Burkholderia multivorans CGD1]
 gi|221167022|gb|EED99492.1| AsmA family protein [Burkholderia multivorans CGD1]
          Length = 780

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 68/209 (32%), Gaps = 16/209 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH---- 57
           + +    +  + ++++       +  DW   +       +  +G+  A+ G IK++    
Sbjct: 28  IGKTAAWIVGIVAILIAATVVFIVTFDWNRAKPWINEHVSDALGRPFAINGDIKVNWRRP 87

Query: 58  --------ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+PS     I I   +       + ++        LPLL+  I +  + +
Sbjct: 88  DGETGWRAWVPWPSFSATQIEIGNPDWAKSPRFATLDAAHFDLALLPLLAHRIVIPSIDV 147

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P ++    + G + W  +          +V L+      G +   D  +     ++  
Sbjct: 148 VNPAIDLERLADGRNTWTFQFKQSSQPSRWDVRLDNFGFAKGTVTYRDAITKADLTIAID 207

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194
            L       +++      S   S    G 
Sbjct: 208 TLGQPIPLGDVLKEQERTSRAASAQRVGK 236


>gi|289649382|ref|ZP_06480725.1| AsmA family protein [Pseudomonas syringae pv. aesculi str. 2250]
          Length = 741

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   D  +          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLALHR 120

Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAVATTAAPGEPTPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204
           D    + +    + L           P+ + +        ++      G    D     +
Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240

Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244
           +      +     + +  K   F     +++DL  N+                       
Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300

Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290
               P  SG  S+A    +     +      +S               +  ++ +    L
Sbjct: 301 LDKTPQISGGLSIAQLDLRTFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348
           +       +    +  V    +  L     G     D       EE +  K  +  +++ 
Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFEADRYRPAESEESKGAKAARKSEVQS 416

Query: 349 DDIQYSVNKKEEKD 362
            +   +       +
Sbjct: 417 GEAAAAAGDSPLPE 430


>gi|167836440|ref|ZP_02463323.1| AsmA family protein [Burkholderia thailandensis MSMB43]
          Length = 848

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 80/241 (33%), Gaps = 35/241 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  +F+V+           DW+  +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIFAVLTAAVGVFIFTFDWSRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P    + + I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETGWRAWVPWPMFSARQVVIGNPPWAKAPDFATLDEARFELALLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P L+    + G +NW    ++S+      V L       G +   D        ++  
Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSSGPSPWKVQLRDFGFAKGTVAYRDA-------ITKA 179

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
           +L ++   L    PL            G      + ++   +A    K  A  L  +   
Sbjct: 180 DLSVAVDTLGQPIPL------------GDVLRQQEETSRAASAQRVGKKGAAQLTAKAKA 227

Query: 226 L 226
            
Sbjct: 228 Q 228


>gi|331017082|gb|EGH97138.1| AsmA family protein [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 741

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/434 (10%), Positives = 119/434 (27%), Gaps = 77/434 (17%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLDGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   +  +          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELHEAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120

Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAVATTGTPGEATPAPAPDAAKPDRPSQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204
           D    + +    + L           P+ + +        ++      G    D     +
Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRTKTELVGQLRMDRVLKRY 240

Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244
           +      +     + +  K+  F     +++DL  N+                       
Sbjct: 241 QFEDMRLSGEVAGEPLQGKLVTFSAQGQLLVDLTANIAEWNSLKISANQLRALGELRARD 300

Query: 245 ----PIYSGVFSVAGDFSKL----------LNLELSAKKSRLSGNFKISDGNVRISRYKL 290
               P  SG  S+A    +              E +  K  +      +  ++ +    L
Sbjct: 301 LDKTPQISGGLSIASLDLRAFFENIGQPLPAMAEGALSKVEMVTRLSGTPTSLALENLNL 360

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348
           +       +    +  V       L           D       EE +  K  +  +++ 
Sbjct: 361 KV----DDSTFTGRIAVDDFARQALRVQLKADTFDADRYRPAESEESKGAKAARKSEVQS 416

Query: 349 DDIQYSVNKKEEKD 362
            +           +
Sbjct: 417 GEAAAIAGDSPLPE 430


>gi|221198041|ref|ZP_03571087.1| AsmA family protein [Burkholderia multivorans CGD2M]
 gi|221204401|ref|ZP_03577418.1| AsmA family [Burkholderia multivorans CGD2]
 gi|221175258|gb|EEE07688.1| AsmA family [Burkholderia multivorans CGD2]
 gi|221181973|gb|EEE14374.1| AsmA family protein [Burkholderia multivorans CGD2M]
          Length = 780

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 67/209 (32%), Gaps = 16/209 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           + +    +  + ++++       +  DW   +       +  +G+  A+ G IK+     
Sbjct: 28  IGKTAAWIVGIVAILIAATVVFIVTFDWNRAKPWINEHVSDALGRPFAINGDIKVDWRRP 87

Query: 57  -------HILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+PS     I I   +       + ++        LPLL+  I +  + +
Sbjct: 88  DGETGWRAWVPWPSFSATQIEIGNPDWAKSPRFATLDAAHFDLALLPLLAHRIVIPSIDV 147

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P ++    + G + W  +          +V L+      G +   D  +     ++  
Sbjct: 148 VNPAIDLERLADGRNTWTFQFKQSSQPSRWDVRLDNFGFAKGTVTYRDAITKADLTIAID 207

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194
            L       +++      S   S    G 
Sbjct: 208 TLGQPIPLGDVLKEQERTSRAASAQRVGK 236


>gi|213971189|ref|ZP_03399307.1| AsmA protein [Pseudomonas syringae pv. tomato T1]
 gi|301382317|ref|ZP_07230735.1| AsmA family protein [Pseudomonas syringae pv. tomato Max13]
 gi|302058512|ref|ZP_07250053.1| AsmA family protein [Pseudomonas syringae pv. tomato K40]
 gi|302132179|ref|ZP_07258169.1| AsmA family protein [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213924058|gb|EEB57635.1| AsmA protein [Pseudomonas syringae pv. tomato T1]
          Length = 741

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/434 (10%), Positives = 119/434 (27%), Gaps = 77/434 (17%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLDGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   +  +          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELHEAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120

Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAVATTGTPGEATPAPAPDAAKPDRPSQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204
           D    + +    + L           P+ + +        ++      G    D     +
Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRTKTELVGQLRMDRVLKRY 240

Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244
           +      +     + +  K+  F     +++DL  N+                       
Sbjct: 241 QFEDMRLSGEVAGEPLQGKLVTFSAQGQLLVDLTANIAEWNSLKISANQLRALGELRARD 300

Query: 245 ----PIYSGVFSVAGDFSKL----------LNLELSAKKSRLSGNFKISDGNVRISRYKL 290
               P  SG  S+A    +              E +  K  +      +  ++ +    L
Sbjct: 301 LDKTPQISGGLSIASLDLRAFFENIGQPLPAMAEGALSKVEMVTRLSGTPTSLALENLNL 360

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348
           +       +    +  V       L           D       EE +  K  +  +++ 
Sbjct: 361 KV----DDSTFTGRIAVDDFARQALRVQLKADTFDADRYRPAESEESKGAKAARKSEVQS 416

Query: 349 DDIQYSVNKKEEKD 362
            +           +
Sbjct: 417 GEAAAIAGDSPLPE 430


>gi|92112654|ref|YP_572582.1| AsmA [Chromohalobacter salexigens DSM 3043]
 gi|91795744|gb|ABE57883.1| AsmA [Chromohalobacter salexigens DSM 3043]
          Length = 789

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/418 (12%), Positives = 117/418 (27%), Gaps = 48/418 (11%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +LR +L  +G L  +V+     +  F D  D +           G  + ++G +     P
Sbjct: 4   LLRALLAVVGVLALIVVGAVVYITTFFDPNDLKPRLVEAVREQSGLDLNLEGQLAWSFYP 63

Query: 61  FPSVFFKDIRI---DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
                 +       +Q  + +  +  E   +   F PLLSGE+ V  + +D   LN    
Sbjct: 64  RLGFSVEQAEAWLPEQPHEEAPFAAFERAEVSVAFAPLLSGEVAVEGLTLDGMRLNLERD 123

Query: 118 SKGVSNWF-------------------------QRKSTMDMIHNVILEKIHVKGGRIKII 152
           ++G  NW                            ++   +   + +  + V+   +   
Sbjct: 124 AQGRGNWQVLLDRLENGGDQAERALAPASAGPGLDQNADSLPVALDIASVQVRDSLVHYR 183

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSID--------SIKGSVIAEGTGNFDNKRSAF 204
           D +      LS L+L  S    +   PL +         ++   V  +           +
Sbjct: 184 DAQRGLDLTLSGLSLDGSNVSPDAAFPLQMAFELERQAPALTSDVNFKSRVRLGLSDGRY 243

Query: 205 KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE 264
           ++       +        L   A  + + + G+L    ++  Y    +          ++
Sbjct: 244 ELNKVTLETSTQWP---ALSEQAQGLNLQI-GHLLAETQRQHYRIDDARLNTRLHHPAVD 299

Query: 265 LSAKKSRL--SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK-VSQDEENLL--NFSE 319
                  L   G   +     ++    L     +   D                      
Sbjct: 300 GKPLGLSLGFDGEADLDAQTAQLRDIAL---SGDDDLDLTGTLSFTDLLGAPEYTGQLKL 356

Query: 320 NGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
           +       L   +   E        ++      +   ++    N     + E F+G+ 
Sbjct: 357 SPLSLRDWLTRFEALPETGDDKALSEVAFTSPVHGDLERINFSNLSLLLDGETFTGEL 414


>gi|170751334|ref|YP_001757594.1| hypothetical protein Mrad2831_4952 [Methylobacterium radiotolerans
           JCM 2831]
 gi|170657856|gb|ACB26911.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
           2831]
          Length = 1146

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/328 (16%), Positives = 99/328 (30%), Gaps = 19/328 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R +L  L     +VLV A  VP F+DW   R   ER     +G  +   G I++ +LP 
Sbjct: 1   MRDLLTALACAVILVLVAALAVPPFVDWQAHRGLVERALARSLGVPVRTDGRIEVRLLPS 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P +    + +   +          +       PLL GE R  +  I +  +   ++    
Sbjct: 61  PRLRVDRLHL-GTDPDRPSLDARFVKAEIALAPLLKGEFRFTETRIGRAEIKLPVAGPDT 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                         ++ +E + ++   +      + +   L   +L++ A          
Sbjct: 120 LKLPPDFGGALRDRDLAIENLQIQQFLVTTQVPATGRTDQLYVQDLRLQAP--------- 170

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP-IIIDLF-GNLF 239
             ++ G    EGT         F+  +  P  +  ++ KI     A P    D   G   
Sbjct: 171 --ALVGPWRIEGTSG----GIPFRAVSGTPGPDGRLAAKISGGGDAAPRFEADARFGLAP 224

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
                       S             +     L+G FK     VR     L       + 
Sbjct: 225 AEAGGTQVEAEGSARLVVGPPTQAAGAYLPFSLAGTFKARGTQVRFEAIDLAIDPGGRAL 284

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHD 327
                 ++   +      + +      D
Sbjct: 285 RLGGTGRLDLRQ-WRAGLTLDARRLDLD 311


>gi|114320936|ref|YP_742619.1| hypothetical protein Mlg_1785 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227330|gb|ABI57129.1| Uncharacterized protein involved in outer membrane biogenesis-like
           protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 470

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/283 (15%), Positives = 99/283 (34%), Gaps = 11/283 (3%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDI 69
           G L +V+++    + L        E    +    +G  ++++G   + + P P+V   D+
Sbjct: 5   GVLVAVLVLAGVALALLWPGERLGEQIAGEMEAQLGVPVSIEGDATLRLWPGPAVRVSDV 64

Query: 70  RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKS 129
            +  + D      +    +   +LPLL G +    + +D P LN    + G  N   R++
Sbjct: 65  LLGPEPDADPVGHLAAARLSVRWLPLLRGRLEPGTLLLDTPVLNLERDAAGALNVDWRQA 124

Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS----PLSIDSI 185
                  + L+ + ++GG +   D+  DQ   +  L +   A    + +    PL+  ++
Sbjct: 125 EDADGRALALD-LRIRGGELHWRDEGQDQTVTVRGLEVDAPATEWRVAADDAQPLTRLAL 183

Query: 186 KGSVIAE----GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
             +V AE    G   FD+             + +   + +           D        
Sbjct: 184 GANVSAERVEVGVLGFDDVAFGLSARDGV-IRTEDWEMTLFGSRGTGEAEADFTEAPPHW 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                + G   +       L    ++  + L+ +      + +
Sbjct: 243 VLNVAF-GDLQLESFPEAWLPAGAASGSAELTASLTSQGEDAQ 284


>gi|332187019|ref|ZP_08388760.1| asmA family protein [Sphingomonas sp. S17]
 gi|332013029|gb|EGI55093.1| asmA family protein [Sphingomonas sp. S17]
          Length = 618

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/355 (13%), Positives = 105/355 (29%), Gaps = 35/355 (9%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKI-HILPFPSVFFKDIRIDQKEDGS--FESKI 83
             W   R    R+AT   G+ + +    ++  I   P++  +D+RI Q         + +
Sbjct: 36  FPWGVLRGAVTREATARFGRPVTIGSVHRVDTIGFHPTIAIEDLRIPQAAWAGQGDFAGL 95

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIH 143
           E   +R    PLL G+    D+ I    L      +G +NW +            L+ + 
Sbjct: 96  ERAEIRFSVWPLLKGDFVPEDIRISGLRLALVRDKQGRTNWSRPGEPQQGGSASDLQGLV 155

Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203
           V  G +   D +  +   +                          + AEG G        
Sbjct: 156 VTDGVVSYRDAKQGREALVR-----------------IAADPDHGLRAEGEGRIRGAPVT 198

Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL 263
            + T   P +         +      + ++  G +         +   +   D  K ++ 
Sbjct: 199 LRFT-GAPVRPGPWRFAAAITGDL--LTMNAQGTMDRPLDTDAMTLDLTARADDLKRIDA 255

Query: 264 ELSAK-----KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFS 318
            + A        +L  + +  +    I+  + +    +       +  V + E   L   
Sbjct: 256 VIEAGLFRTRPVQLRAHVRHDNPRWTITDLRGRIGRSD----LTGRLTVDKKEGRTL-LD 310

Query: 319 ENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENF 373
            + A    D ++     E   +    + +    +   N + +       +    F
Sbjct: 311 GDVAAGQLDFDDLS-SPEGRAEAAALERRIG-PRLVPNTRIDIGKIDTTDGTIRF 363


>gi|161524672|ref|YP_001579684.1| AsmA family protein [Burkholderia multivorans ATCC 17616]
 gi|189350571|ref|YP_001946199.1| hypothetical protein BMULJ_01743 [Burkholderia multivorans ATCC
           17616]
 gi|160342101|gb|ABX15187.1| AsmA family protein [Burkholderia multivorans ATCC 17616]
 gi|189334593|dbj|BAG43663.1| conserved hypothetical protein [Burkholderia multivorans ATCC
           17616]
          Length = 759

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 68/209 (32%), Gaps = 16/209 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH---- 57
           + +    +  + ++++       +  DW   +       +  +G+  A+ G IK++    
Sbjct: 7   IGKTAAWIVGIVAILIAATVVFIVTFDWNRAKPWINEHVSDALGRPFAINGDIKVNWRRP 66

Query: 58  --------ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+PS     I I   +       + ++        LPLL+  I +  + +
Sbjct: 67  DGETGWRAWVPWPSFSATQIEIGNPDWAKSPRFATLDAAHFDLALLPLLAHRIVIPSIDV 126

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P ++    + G + W  +          +V L+      G +   D  +     ++  
Sbjct: 127 VNPAIDLERLADGRNTWTFQFKQSSQPSRWDVQLDNFGFAKGTVTYRDAITKADLTIAID 186

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194
            L       +++      S   S    G 
Sbjct: 187 TLGQPIPLGDVLKEQERTSRAASAQRVGK 215


>gi|320326483|gb|EFW82535.1| AsmA family protein [Pseudomonas syringae pv. glycinea str. B076]
          Length = 741

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/434 (10%), Positives = 120/434 (27%), Gaps = 77/434 (17%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   D  +          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLALHR 120

Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAVATTAAPGEPAPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204
           D    + +    + L           P+ + +        ++      G    D     +
Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDRVLKRY 240

Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244
           +      +     + +  K   F     +++DL  N+                       
Sbjct: 241 QFEDMRLSGEVAGEPLLGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300

Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRISRYKL 290
               P  SG  S+A    +     +      +S               +  ++ +    L
Sbjct: 301 LDKTPQISGGLSIAQLDLRTFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLALENLNL 360

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKNDDLKK 348
           +       +    +  V    +  L     G     D       EE +  K  +  +++ 
Sbjct: 361 KV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARKSEVQS 416

Query: 349 DDIQYSVNKKEEKD 362
            +   +       +
Sbjct: 417 GEAAAAAGDSPLPE 430


>gi|187479318|ref|YP_787343.1| hypothetical protein BAV2847 [Bordetella avium 197N]
 gi|115423905|emb|CAJ50457.1| putative exported protein [Bordetella avium 197N]
          Length = 687

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/354 (13%), Positives = 95/354 (26%), Gaps = 31/354 (8%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF----PSVFFKDIRIDQKEDG 77
            V   +DW  F+     +    +G+  A++G + +           +   DIRI   + G
Sbjct: 24  IVVSNLDWNRFKPVINEKVMAAIGRPFAIQGDLSLTWGRSAGWGAHITASDIRIANTDWG 83

Query: 78  S--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW--FQRKSTMDM 133
                + IE L+     LPLL   + + ++   +P  N    + G +NW     +S    
Sbjct: 84  QGADLAHIERLAFSLAALPLLRQRVEIHELQFTRPSANLERRADGQANWDFAMPESKGPS 143

Query: 134 IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL---------------QISARFLNIIS 178
              V +  I    G+I+  D   +    +    L                I         
Sbjct: 144 SWTVDIGAIGFDQGQIRYRDALLNADLDMQIDPLGKPVPFAQIAGDALQTIKQADAATAQ 203

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
            L   +       +  G + +     +  A            +Q    A      + G L
Sbjct: 204 RLEAQTEDYVFGWKVKGQYKDLPVQGEGKAGGVLSLHTRPFPLQAELHAGTTHAAVVGTL 263

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQ-S 292
                         ++GD    L                 G+ + S       ++  +  
Sbjct: 264 TDPMHLGALDLRLQLSGDSMANLFPLTGVTLPDTPPYATDGHLQASLREAGGPQFHYRGF 323

Query: 293 ILPNSSTDEDNKTKVSQ-DEENLLNFSENGAES-MHDLNETDFFEEEEKKNKND 344
                ++D       +       L+   +     M DL      +         
Sbjct: 324 NGKVGASDLHGDISFALQAPRPKLSGQLSSKLLRMADLGPLIGVQSGAGTTART 377


>gi|26987029|ref|NP_742454.1| AsmA family protein [Pseudomonas putida KT2440]
 gi|24981648|gb|AAN65918.1|AE016219_11 conserved hypothetical protein [Pseudomonas putida KT2440]
          Length = 748

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 99/306 (32%), Gaps = 42/306 (13%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KE 75
           +   F +    D  D++++  + A      ++ + G I   + P+  +   +  I    +
Sbjct: 20  VALGFALTHLFDPNDYKDEIRQLARDKAHVELTLNGDIGWSLFPWLGLELHEASIATLNK 79

Query: 76  DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------- 124
                + ++ L +    LPLL  E+++ D+ ++  +L      +G  NW           
Sbjct: 80  PKEPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLTLARDEQGHGNWEDIGKPLPAQN 139

Query: 125 ---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
                              ++ D    + ++ + V   R++  D ++   Y    + L  
Sbjct: 140 GASTDASAQAPAEQTPATTNSNDRAIKLDIDSLTVNNARVQYTDAKTGHSYSAESIQLST 199

Query: 170 SARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAFKI---TANFPAKNKAIS 218
                     L   +        IK      G   FD K   +       +     +   
Sbjct: 200 GPIHEGANIALKASAFISASQPSIKARTELAGELRFDRKLKRYNFEDMRLSGETSGEPTG 259

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278
            K   F     +++DL  N+       + +      G     LNL    K  +LSG   I
Sbjct: 260 GKTVTFAAQGQLLVDLAANVASWNGLKVSANQLRALG----ELNLRDLDKAPQLSGGLSI 315

Query: 279 SDGNVR 284
           +  N+R
Sbjct: 316 AQFNLR 321


>gi|167562590|ref|ZP_02355506.1| AsmA family protein [Burkholderia oklahomensis EO147]
          Length = 246

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 76/240 (31%), Gaps = 35/240 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  + +V+           DW   +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIVAVLTAALGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      + I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETGWRAWVPWPMFSASQVVIGNPAWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P L+    + G +NW    +K+       V L       G +   D        ++  
Sbjct: 127 VNPALDVERLADGRNNWTFEFKKTAGPSPWKVQLRDFGFAKGTVAYRDA-------ITKA 179

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
           +L ++   L    PL            G      + ++   +A    K  A  L  +   
Sbjct: 180 DLTVAIDTLGQQIPL------------GDVLRQQEATSRAASAQRVGKRGAAQLTAKAQA 227


>gi|83943880|ref|ZP_00956337.1| AsmA family protein [Sulfitobacter sp. EE-36]
 gi|83845127|gb|EAP83007.1| AsmA family protein [Sulfitobacter sp. EE-36]
          Length = 647

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 29/387 (7%), Positives = 102/387 (26%), Gaps = 26/387 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ ++  +G L  +++V   ++   +           Q   + G+++ + G + +   P 
Sbjct: 1   MKWIIRAIGILLLILVVAVGSL-FLLPADRIARIAADQLRNLTGREVTITGDVGLTFWPV 59

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V    + +   +             ++  + + L+ GEI++ ++    P +       
Sbjct: 60  LGVTAGGLEVGNADWAKDGAMLSAANAAIGVDAMALIRGEIKITNIEAQSPTIRLEQRRD 119

Query: 120 GVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
           G ++W                +       + ++++ +    +   D E   +     ++L
Sbjct: 120 GRASWQFSDGGGEAAIETAPTAPARSPRPLTIQRLDITDATLIY-DAEGRDLVRFDGVDL 178

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
            +        + +       +         +     F    N   +        +   ++
Sbjct: 179 SLDWPERAGDAVIKAALRPAADRVSIEATIN----RFDQFLNGDIRPLRARADTKGGGVS 234

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-LSGNFKIS-DGNVRI 285
                 L G +  +           +A      + L     K+  ++ +  ++ D  + +
Sbjct: 235 LTGRAGLAGAVAGDLWLKTSDTGRFLAALGVGDIALPQGLGKTADINLDLTLTPDRRLAL 294

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
                                ++ +    +N   N                    +    
Sbjct: 295 REVVADLG----GNALTGAADITLNGTPDVNAQINVGALDLTGFAGSAPSGTAPASSTPA 350

Query: 346 LKKDDIQYSVNKKEEKDNSHDKENQEN 372
                            ++ + E    
Sbjct: 351 PASPTGWSKAPIDASALSAFNGEVALR 377


>gi|291615693|ref|YP_003518435.1| YhjG [Pantoea ananatis LMG 20103]
 gi|291150723|gb|ADD75307.1| YhjG [Pantoea ananatis LMG 20103]
          Length = 693

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 100/362 (27%), Gaps = 42/362 (11%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              LP+P +  +DI +  
Sbjct: 36  TFDWNRLKPTINQKVSAELNRPFAIRGDLGVAWQRNPEEPGWRGWLPWPHLHAEDIMLGN 95

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        ++ +      L LL  E+ +  + + QP      ++   +NW       
Sbjct: 96  PPDIPDVTMIHLQRVDATLAPLALLHKEVFIPWIKLQQPDARLIQTADKKNNWTFTLADS 155

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    G I   D  +     L    L     +  I       
Sbjct: 156 DSKDDNAPPSAWSFRLDNILFDQGTILYRDAVNQADVTLKVNPLGKPVPYSQIAGGDDKQ 215

Query: 184 SIKGSVI--AEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
              G  +   + +G++ N++   +         +++  +  IQ         + L G + 
Sbjct: 216 QGAGDFVFGWQASGSYHNEKLTGQGKIGGMLSLRSQTTAFPIQADVRNGSTRVQLTGGVQ 275

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYK 289
                         +GD    L                  RL   F   DG V R   + 
Sbjct: 276 DPLNLGGLDVRLRFSGDTLANLYGLTGVLLPDTPPYETDGRLIAKFTGKDGAVFRYQGFN 335

Query: 290 LQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES-MHDLNETDFFEEEEKKNKNDDLK 347
                 +           SQ      L       +  M DL         +   K +  K
Sbjct: 336 GHIGDSD----IHGSLTYSQGKPRPKLVGELRSDQLRMADLGPLIGVNSGKGSEKTEQAK 391

Query: 348 KD 349
             
Sbjct: 392 AK 393


>gi|289803470|ref|ZP_06534099.1| hypothetical protein Salmonellaentericaenterica_02522 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 433

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +D+ +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQESGWRSWVPWPHVHAEDVILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    GRI I D+ S     +  ++        + ++     
Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206

Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + K +        +  G ++ +              ++++    +Q    +    +   G
Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286
            +    K          +GD    L                  RL         +V    
Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFNYR 326

Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344
            +  +    +           +       L       +    DL      +      K+ 
Sbjct: 327 GFNGRIGDSD----IHGTFTYTTGKPSPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
           +  K   Q    K  +  +       + F  DK
Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409


>gi|313496651|gb|ADR58017.1| AsmA family protein [Pseudomonas putida BIRD-1]
          Length = 750

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 98/309 (31%), Gaps = 44/309 (14%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KE 75
           +   F +    D  D++++  + A      ++ + G I   + P+  +   +  I    +
Sbjct: 20  VALGFALTHLFDPNDYKDEIRQLARDKAHVELTLNGDIGWSLFPWLGLELHEASIATLNK 79

Query: 76  DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--------- 126
                + ++ L +    LPLL  E+++ D+ ++  +L      +G  NW           
Sbjct: 80  PKEPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLTLARDEQGHGNWEDIGKPLPAQN 139

Query: 127 -------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
                                 + D    + ++ + V   R++  D ++   Y    + L
Sbjct: 140 GAGTDAPAQAPAQAEQAPATSDSNDRAIKLDIDSLTVNNARVQYTDAKTGHSYSAESIQL 199

Query: 168 QISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAFKI---TANFPAKNKA 216
                       L   +        IK      G   FD K   +       +     + 
Sbjct: 200 STGPIHEGANIALKTSAFISASQPNIKARTELAGELRFDRKLKRYNFEDMRLSGETSGEP 259

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF 276
              K   F     +++DL  N+       + +      G     LNL    K  +LSG  
Sbjct: 260 TGGKTVTFAAQGQLLVDLAANVASWNGLKVSANQLRALG----ELNLRDLDKAPQLSGGL 315

Query: 277 KISDGNVRI 285
            I+  N+R 
Sbjct: 316 SIAQFNLRT 324


>gi|77456549|ref|YP_346054.1| AsmA [Pseudomonas fluorescens Pf0-1]
 gi|77380552|gb|ABA72065.1| putative exported protein [Pseudomonas fluorescens Pf0-1]
          Length = 740

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/354 (11%), Positives = 108/354 (30%), Gaps = 44/354 (12%)

Query: 18  VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KED 76
              F +    D  D++++  + A      ++ + G I   + P+  +   +  +    + 
Sbjct: 21  AAGFALTHLFDPNDYKDEIRQIARDKAHIELTLNGDIGWSLFPWLGLELHEASVATLAKP 80

Query: 77  GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW------------ 124
               + ++ L +    LPLL  E+++ D+ ++  +L       G  NW            
Sbjct: 81  AEPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLRLNRDKNGHGNWEDIGKVPAPAGS 140

Query: 125 -------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
                                    + ++ + V   R++  D+ + + +    + L   A
Sbjct: 141 TPPATAGEASPATPAPVEKPAQPIRLDIDSLTVNNARVEYNDELTGKQFSAESIQLSTGA 200

Query: 172 RFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNKAISLK 220
              +   P+   +  G+            G   F+     +    +  +       +  K
Sbjct: 201 VHDSTNIPVKATAFLGTNQPVLRVRTELNGELRFERALQRYKFEDLKLSGEVAGDPLQGK 260

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280
              F     +++D   N+       +        G     L      K  ++SG   I+ 
Sbjct: 261 TVTFAAQGQLLLDKAANVAEWTGIKLSVNQLRALG----ELKANDLDKTPQISGGISIAQ 316

Query: 281 GNVR-ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
            ++        Q++   +         VS+      + + +       L+++ F
Sbjct: 317 FDLAKFVDSIGQTLPAMAEGSLSKVELVSRVAATPTSLALD--NINLKLDDSSF 368


>gi|113868758|ref|YP_727247.1| hypothetical protein H16_A2800 [Ralstonia eutropha H16]
 gi|113527534|emb|CAJ93879.1| Uncharacterized protein involved in outer membrane biogenesis
           [Ralstonia eutropha H16]
          Length = 783

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/368 (12%), Positives = 101/368 (27%), Gaps = 68/368 (18%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI---- 58
           R+V++        ++     V L  DW   +     + T  +G+  A+ G + +      
Sbjct: 5   RKVVLWSVLTPIALIALLVVVILTFDWNRLKPWLNDRVTEAIGRPFAINGDLSVTWRRGE 64

Query: 59  --------LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P+P +  +DI I   +       + +  L      +PLL+ +I V  + +D
Sbjct: 65  GEKGWHTLVPWPRLSARDITIANTDWAKQPNLATVRELIFVLRPIPLLAHQIAVPTIVVD 124

Query: 109 QPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-----QVYF 161
            P +         +NW              + + ++ +  G + + DQ        ++  
Sbjct: 125 SPAVWLERLPDARNNWTLEFGPKKGPSEWELHIGEVVLARGNLALADQLKKIELQAELDT 184

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGS--------------------------------- 188
           +    L   AR   +++P +     G                                  
Sbjct: 185 IGGSPLYDKARDGALVAPEASAVPPGPPASAPGAARAASAPAASAPGVSAPPATAKGPDD 244

Query: 189 ---VIAEGTGNFDNKRSAFKITANF--PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243
              V  + TG ++         A      +N  +   I            + G +     
Sbjct: 245 RYGVRWKATGRYNEATINASGKAGTVLSLRNADVPFPILADVRVGTTRAVIEGTVTNPAH 304

Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSIL 294
                   +++GD    L                  RL    +         ++  +   
Sbjct: 305 LAALDVHLTLSGDSMARLYALTGVVLPSTPPYQTRGRLMATLRKQGSIYEYQKFTGRVGG 364

Query: 295 PNSSTDED 302
            + S    
Sbjct: 365 SDLSGTLT 372


>gi|325525807|gb|EGD03534.1| AsmA family protein [Burkholderia sp. TJI49]
          Length = 251

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 68/209 (32%), Gaps = 16/209 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           + +    +  + +V++  A       DW   +     Q +  +G+  A+ G IK+     
Sbjct: 15  IGKSAAWIVGIVAVLIAAAGVFLFTFDWNRAKPWVNEQVSAALGRPFAINGDIKVGWRRP 74

Query: 57  -------HILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+PS     I I   +       + ++        LPLL+ EI +  + +
Sbjct: 75  DGETGWRAWVPWPSFSATQIEIGNPDWAKSPKFATLDAAHFDLAILPLLAHEIVIPSIDV 134

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P ++    + G + W  +           V L+      G +   D  +     ++  
Sbjct: 135 VNPAIDLERLADGRNTWTFQFKQSSQPSTWKVRLDSFGFAKGTVVYRDAITKADLTVAID 194

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194
            L       +++      S   S    G 
Sbjct: 195 TLGQPIPLGDVLKEQEQTSRAASAQRVGK 223


>gi|237802204|ref|ZP_04590665.1| AsmA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331025061|gb|EGI05117.1| AsmA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 741

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/434 (10%), Positives = 118/434 (27%), Gaps = 77/434 (17%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   D  +          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELNDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLMLHR 120

Query: 117 SSKGVSNW------------------------FQRKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAVAATAASDDSTPAPAPDAPKTDRPAQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204
           D    + +    + L           P+ + +        ++      G    D     +
Sbjct: 181 DARKGRTFTAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRTKTELVGQLRMDRVLKRY 240

Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ----------------- 244
           +      +     + +  K   F     +++DL  N+                       
Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGELRARD 300

Query: 245 ----PIYSGVFSVAGDFSKLLNLELSAKKSRLSG----------NFKISDGNVRISRYKL 290
               P  SG  S+A    +     +      ++               +  ++ +    L
Sbjct: 301 LDKTPQISGGLSIAQLDLRTFLDSIGQPLPAMTDGALSKVEMVTRLAGTPTSLALENLNL 360

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEE--EKKNKNDDLKK 348
           +       +    +  V    +  L     G     D       EE    K  +  +++ 
Sbjct: 361 KV----DDSSFTGRIAVDDFAKQALRVQLKGDTFNADRYRPAESEESKGTKAARKAEVQS 416

Query: 349 DDIQYSVNKKEEKD 362
            +           +
Sbjct: 417 GEAAAVAGDSPLPE 430


>gi|167569773|ref|ZP_02362647.1| AsmA family protein [Burkholderia oklahomensis C6786]
          Length = 305

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 76/240 (31%), Gaps = 35/240 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  + +V+           DW   +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIVAVLTAALGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      + I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETGWRAWVPWPMFSASQVVIGNPAWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P L+    + G +NW    +K+       V L       G +   D        ++  
Sbjct: 127 VNPALDVERLADGRNNWTFEFKKTAGPSPWKVQLRDFGFAKGTVVYRDA-------ITKA 179

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
           +L ++   L    PL            G      + ++   +A    K  A  L  +   
Sbjct: 180 DLTVAIDTLGQQIPL------------GDVLRQQEETSRAASAQRVGKKGAAQLTAKAQA 227


>gi|316935672|ref|YP_004110654.1| AsmA family protein [Rhodopseudomonas palustris DX-1]
 gi|315603386|gb|ADU45921.1| AsmA family protein [Rhodopseudomonas palustris DX-1]
          Length = 648

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/317 (17%), Positives = 110/317 (34%), Gaps = 27/317 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R+ I +  L +  L GA  + L ID    R+  E+Q     G ++AV G I + I P 
Sbjct: 5   IKRLGISVAVLVAAALTGAVALSLTIDRGVLRQAVEQQLRAATGLQLAVDGAIDVTIFPR 64

Query: 62  PSVFFKDIRID--QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            +V F D+R+       G     ++ L      LPLL     + D+ + QP ++    + 
Sbjct: 65  STVVFSDVRLASDGDGGGDAALSVKTLIANLRLLPLLLRRFEIADVVLGQPSIHVVRDAD 124

Query: 120 GVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
           G SNW        R     +   V   +I ++ G +   D  +     + D++L ++   
Sbjct: 125 GRSNWTPFIASLTRTMKPGLDDQVSFSEIRLQDGELSYRDDTAGVHEHIGDIDLSLAWPS 184

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
           ++        +  G     G    D   +     A     +  I L++       P+ I 
Sbjct: 185 ISRTF-----AATGQFDFRGE-RIDGSITIADFIAALRGDSSGIKLRLA----GAPMKIA 234

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRI 285
             G +  N+     +G  +      +        +           L     +   +V +
Sbjct: 235 FDGTVA-NKSALSLTGTVTADSASLRNALRWAGQEPPGAGGFGRFALKARANLMGPSVAL 293

Query: 286 SRYKLQSILPNSSTDED 302
           +   ++     +     
Sbjct: 294 TNVNVELDKNVAEGVMT 310


>gi|327395958|dbj|BAK13380.1| AsmA family protein YhjG [Pantoea ananatis AJ13355]
          Length = 685

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 100/362 (27%), Gaps = 42/362 (11%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              LP+P +  +DI +  
Sbjct: 28  TFDWNRLKPTINQKVSAELNRPFAIRGDLGVAWQRNPEEPGWRGWLPWPHLHAEDIMLGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        ++ +      L LL  E+ +  + + QP      ++   +NW       
Sbjct: 88  PPDIPDVTMIHLQRVDATLAPLALLHKEVFIPWIKLQQPDARLIQTADKKNNWTFTLADS 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    G I   D  +     L    L     +  I       
Sbjct: 148 DSKDDNAPPSAWSFRLDNILFDQGTILYRDAVNQADVTLKVNPLGKPVPYSQIAGGDDKQ 207

Query: 184 SIKGSVI--AEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
              G  +   + +G++ N++   +         +++  +  IQ         + L G + 
Sbjct: 208 QGAGDFVFGWQASGSYHNEKLTGQGKIGGMLSLRSQTTAFPIQADVRNGSTRVQLTGGVQ 267

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYK 289
                         +GD    L                  RL   F   DG V R   + 
Sbjct: 268 DPLNLGGLDVRLRFSGDTLANLYGLTGVLLPDTPPYETDGRLIAKFTGKDGAVFRYQGFN 327

Query: 290 LQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES-MHDLNETDFFEEEEKKNKNDDLK 347
                 +           SQ      L       +  M DL         +   K +  K
Sbjct: 328 GHIGDSD----IHGSLTYSQGKPRPKLVGELRSDQLRMADLGPLIGVNSGKGSEKTEQAK 383

Query: 348 KD 349
             
Sbjct: 384 AK 385


>gi|104784109|ref|YP_610607.1| AsmA protein [Pseudomonas entomophila L48]
 gi|95113096|emb|CAK17824.1| putative AsmA protein [Pseudomonas entomophila L48]
          Length = 749

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/308 (15%), Positives = 105/308 (34%), Gaps = 43/308 (13%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KE 75
           +   F +    D  D++++  + A      ++ + G I   + P+  +   +  I     
Sbjct: 20  VALGFALTHLFDPNDYKDEIRQLARDKAHVELTLNGDIGWSLFPWLGLELHEASIATLNN 79

Query: 76  DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------- 124
                + ++ L +    LPLL  E+++ D+ ++  +L     + G  NW           
Sbjct: 80  PKVPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLTLTRDANGHGNWEDIGKPLPDAT 139

Query: 125 ----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
                             +    + +  + ++ + V   R+   D+++ Q Y    + L 
Sbjct: 140 AANAPAATPGEAPVNPAAKPEPSERMVKLDIDSLTVNNARVLYTDEKAGQSYGAESIQLS 199

Query: 169 ISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAFKI---TANFPAKNKAI 217
             A    I  PL   +        IK      G   FD K   + +     +     + +
Sbjct: 200 TGAVHEGINIPLKASAFLSASQPNIKARTELTGELRFDRKLKRYNLEDMRLSGETSGEPL 259

Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
           + K   F     +++DL  N+       + +      G     LN+    K  ++SG   
Sbjct: 260 AGKTLTFVAQGQVLVDLAANVASWSGLKVSANQLRALG----ELNVRDLDKAPQVSGGLS 315

Query: 278 ISDGNVRI 285
           I+  ++R 
Sbjct: 316 IAQFDLRT 323


>gi|312174245|emb|CBX82498.1| Uncharacterized protein yhjG [Erwinia amylovora ATCC BAA-2158]
          Length = 663

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/363 (12%), Positives = 98/363 (26%), Gaps = 40/363 (11%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDI 69
           T     DW   +    R+ +  + +  A++G + +              +P+P V  +DI
Sbjct: 2   TAIALFDWNRLKPTINRKVSAEINRPFAIRGDLGVSWQRNRGEPGWRSWVPWPQVHAQDI 61

Query: 70  RIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW--- 124
            +    D        ++ +      L LLS +I +  + + QP      ++ G +NW   
Sbjct: 62  MLGNPPDIPDVTMVHLQRVEATLSPLALLSRQIYLPWISLQQPQARLVQTANGKNNWTFN 121

Query: 125 -----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
                 Q+        +  L+ I    G +   D  +     +    L     +  +   
Sbjct: 122 LAGSDDQQAGKGSSAWSFRLDNIAFDRGTVSYRDAINQADVQVMVDPLGKPVPYGQLAGG 181

Query: 180 LSIDSIKGSVI--AEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLF 235
                     +     +G + N++ + +         +++     I          + + 
Sbjct: 182 DDKQKGAADFVFGWRASGTYHNEKLSGEGKTGGMLSLRSQNTPFPIAADVRNGTTRVRIA 241

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGN-VRI 285
           G +               +GD    L                   L+  F+  +G   R 
Sbjct: 242 GTVRDPLNMGAVDIRLRFSGDTLANLYGLTGVLLPETPPYETDGHLTARFQQPNGAEFRY 301

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES-MHDLNETDFFEEEEKKNKND 344
             +       +                  L  +    +  M DL         +   K  
Sbjct: 302 QNFNGHIGDSDIRGSL---AYRQGKPRPELTGTLESLQLRMADLGPLIGVNSGKDSAKTA 358

Query: 345 DLK 347
             K
Sbjct: 359 RAK 361


>gi|332286914|ref|YP_004418825.1| AsmA protein [Pusillimonas sp. T7-7]
 gi|330430867|gb|AEC22201.1| AsmA protein [Pusillimonas sp. T7-7]
          Length = 712

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 103/324 (31%), Gaps = 37/324 (11%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           +V++GL    +++LV A ++    +W   R    RQA+ +  + +A++G + +       
Sbjct: 6   KVILGLCLGLALILVLAVSLLASFNWNYARPWVNRQASELADRSVAIQGDLDVQWIRPHD 65

Query: 58  ------ILPFPSVFFKDIRIDQKED---GSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                  LP+P +   DI +            +++  LS+      LL   +++  + I 
Sbjct: 66  EPGWRGWLPWPQISASDIVVGNPAWIPQEKNMARVSQLSVLINPAALLERTVQIASLQIG 125

Query: 109 QPHLNFYLSSKGVSNWFQ--RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
           Q  L     + G +NW              V L+ + ++G   +++D  S          
Sbjct: 126 QADLLLQRQADGAANWTLHKDPQESASAWKVDLQTLSLEGVHAQVLDAVSTLELTAE--- 182

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
                  LN +     D       A+G           K       +  +    +Q    
Sbjct: 183 -------LNTLQEQGADGYGIGWKADGAYRGAGVSGEGKTGGLLSLREGSKPFPLQGQVH 235

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFK 277
                I+L G++   +          ++GD    L   L               L G  +
Sbjct: 236 IGSTTIELEGSVVRPQNIAALDVNLKLSGDTMADLYPLLGVALPNTPPYRTEGHLIGELE 295

Query: 278 ISDGNVRISRYKLQSILPNSSTDE 301
             D   R   +K      +     
Sbjct: 296 GDD-TWRYESFKGMVGKSDLEGTL 318


>gi|229587886|ref|YP_002870005.1| hypothetical protein PFLU0324 [Pseudomonas fluorescens SBW25]
 gi|229359752|emb|CAY46602.1| putative exported protein [Pseudomonas fluorescens SBW25]
          Length = 736

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/375 (12%), Positives = 108/375 (28%), Gaps = 69/375 (18%)

Query: 18  VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KED 76
              F +    D  D++++  + A      ++ + G I   + P+  +   +  +      
Sbjct: 21  ALGFALTHLFDPNDYKDEIRQIARDKAHIELTLNGDIGWSLFPWLGLELHEASVATLTAP 80

Query: 77  GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---------- 126
               + ++ L +    LPLL  E+++ D+ ++  +L      +G  NW            
Sbjct: 81  TQPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLRLNRDKQGHGNWEDIGKNVTEASV 140

Query: 127 ------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                                 + ++ + +   R++  D+++ + +    + L   A   
Sbjct: 141 GSPGSVEQPAESEPEKPAKPIRLDIDSLTINNARVEYNDEQTGKQFSAESIQLSAGAVHE 200

Query: 175 NIISPLSIDSIKGS--------VIAEGTGNFDNKRSAFKI---TANFPAKNKAISLKIQL 223
               P+ + +  GS            G          +++        A  + +  K   
Sbjct: 201 GASIPVKLTAFFGSNQPVMRVKTELNGNLRIQRALKRYQLEDMKITGEATGEPLQGKTVT 260

Query: 224 FPLAYPIIIDLFGNLFWN---------------------EKQPIYSGVFSVAGDFSKL-- 260
           F     +++D   N+                        +K P  SG  S+A        
Sbjct: 261 FSTQGQLLVDQAANIAEWTNMKLSANQLRALGELKVNDLDKTPQLSGALSIAQFDLAKFL 320

Query: 261 --------LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312
                      + S  K  L    K +  +V +    L+       +    +  V    +
Sbjct: 321 DSVGHPLPPMADGSLSKVELVSRLKGTPTSVALEDLNLKL----DGSTFTGRVAVEDFAK 376

Query: 313 NLLNFSENGAESMHD 327
             L     G     D
Sbjct: 377 QSLRVQLKGDTFNAD 391


>gi|329113698|ref|ZP_08242473.1| Putative protein YhjG [Acetobacter pomorum DM001]
 gi|326696961|gb|EGE48627.1| Putative protein YhjG [Acetobacter pomorum DM001]
          Length = 725

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/374 (11%), Positives = 114/374 (30%), Gaps = 46/374 (12%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64
           VLIGLG     +++       F  W  F      +AT I+ +K  ++  + + +    ++
Sbjct: 25  VLIGLGCFLLAIILLIV----FWSWDWFVPLVNSRATAILHRKTTIE-HLHVALGRVTTI 79

Query: 65  FFKDIRIDQKEDGSF----ESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYLSSK 119
             +++RI+Q +         ++ + L++  +    L    + +  + + +P  +      
Sbjct: 80  RVENLRIEQPKTFDQEKDLFAQSKELTVSVDVWSYLWHRALHIPLIALTEPKADILARKN 139

Query: 120 GVSNWFQRKSTMDMIHN----------VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
           G +N+   +       N            + ++ +  G + +          +       
Sbjct: 140 GENNYTFTEDGKPAPANKNKTEQASSLPDIGELRITNGALHVRHDPLQADMQM------- 192

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLA 227
                 + +     + +GS+     G +  +    +          +      + LF   
Sbjct: 193 -----GVETTPPQGNNRGSLRLTAKGRYAQQPITARFVGGTVLSFVDDKEPYPVDLFVQN 247

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGN 282
            P    L G++               AG    LL         R     ++G    +  +
Sbjct: 248 GPTTATLKGDVVHPLTLSGAHLKLHFAGPDMSLLYPLTGVPIPRTPAYSITGALNYTREH 307

Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLL-NFSENGAESMHDLNETDFFEEEEKKN 341
           V    ++ +    +         +++  E+ +      +  +      +   F   +   
Sbjct: 308 VVFKDFEGKMGTSD----IGGTIEINPHEKPIFVQADLHSKQVNLV--DLGGFIGAKPDK 361

Query: 342 KNDDLKKDDIQYSV 355
              + K +    +V
Sbjct: 362 TKAEEKAEAKSNTV 375


>gi|167738309|ref|ZP_02411083.1| AsmA family protein [Burkholderia pseudomallei 14]
          Length = 242

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 16/177 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  +F+V+           DW   +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      I I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
             P L+    + G +NW    ++S       V L       G +   D  +     +
Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183


>gi|304398126|ref|ZP_07380001.1| AsmA family protein [Pantoea sp. aB]
 gi|304354412|gb|EFM18784.1| AsmA family protein [Pantoea sp. aB]
          Length = 686

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/384 (13%), Positives = 109/384 (28%), Gaps = 41/384 (10%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + I              +P+P +  +DI +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGIDWARNRDEAGWRRWVPWPQIHAEDIMLGN 87

Query: 74  KED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------ 125
             D        ++ +      L LL  E+ +  + + +P      ++   +NW       
Sbjct: 88  PPDISDVTMVHLQRVDATLSPLSLLHKELFIPWIKLQRPDARLIQTADKKNNWTFTLADS 147

Query: 126 --QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
               K+      +  L+ I    G+I+  D  +     +    L     +  I       
Sbjct: 148 DKDEKNAAPSAWSFRLDNILFDQGQIRYRDAINRADVTVQVNPLGKPVPYTQIAGGDDQQ 207

Query: 184 SIKGSVI--AEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
              G  +   + +G ++N++             +++     IQ         + + G L 
Sbjct: 208 KGAGDFVFGWQASGTYNNEKLTGDGKIGGMLSLRSQNTPFPIQADVRNGTTRVQVTGGLQ 267

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYK 289
                   +     +GD    L                   L   F    G V R  ++ 
Sbjct: 268 DPMNLGGLNVRLRFSGDTLANLYGLTGVLLPDTPPYETDGHLIAKFNGKKGAVYRYEKFN 327

Query: 290 LQSILPNSSTDEDNKTKVSQ-DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
                 +           SQ      L+      +            +  K ++     K
Sbjct: 328 GHIGDSD----IHGSLIYSQVKPRPTLSGEMTSEQLRMADLGPLIGVDSGKGSEKTAQAK 383

Query: 349 DDIQYSVNKKEEKDNSHDKENQEN 372
                  N+  ++   HDK   +N
Sbjct: 384 ARRGEKSNQPADRVLPHDKFETKN 407


>gi|119900137|ref|YP_935350.1| outer membrane protein [Azoarcus sp. BH72]
 gi|119672550|emb|CAL96464.1| outer membrane protein [Azoarcus sp. BH72]
          Length = 682

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/338 (12%), Positives = 88/338 (26%), Gaps = 42/338 (12%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQKE 75
           DW   R     + +  +G+  A+ G + +              LP   V   D+ +   E
Sbjct: 30  DWNRLRPTVNERVSAALGRPFAINGDLTVRWARADDPPGWRAWLPALQVGAADLVLGNPE 89

Query: 76  DG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM 133
                  +  E +  R   LPLL+ ++R+  + + QP L    ++ G + W   +     
Sbjct: 90  WAQRPGFAAFERVDFRLALLPLLAHQVRIPRIEVRQPALQLERAADGRATWTFDQGDDKD 149

Query: 134 I----HNVILEKIHVKGGRIKIIDQESDQVY--FLSDLNLQISARFLNIISPLSIDSIKG 187
                  + + +I    G   + D          L+ L   I    +        D+   
Sbjct: 150 DAAPRWQLDIGEIAFDRGTATVDDAVLGLQAEGELTPLEAAIPFADIVGKGATQTDATAP 209

Query: 188 S-------VIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNL 238
           +          +  G + ++    +           +     +Q+        I L G L
Sbjct: 210 TPAPADYAFAWQARGRYQDQPFNARGKLGGLLALHGRGQPFPLQVEARIGATRITLAGVL 269

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFK-ISDGNVRISRY 288
                         +AG+    L                   L    +     + R   +
Sbjct: 270 VDPRAPEALDLQLRLAGNSLADLYPLTGVTLPETPPYSTEGHLIAQLQGADGRSFRYRDF 329

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
             +        D       +      L+          
Sbjct: 330 SGRIGDSEIRGDL---AYTTAAPRPRLSGELRSRLLRL 364


>gi|254447477|ref|ZP_05060943.1| AsmA family protein [gamma proteobacterium HTCC5015]
 gi|198262820|gb|EDY87099.1| AsmA family protein [gamma proteobacterium HTCC5015]
          Length = 673

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 94/299 (31%), Gaps = 45/299 (15%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF-- 79
            + +F+D  DF+   E+      G+++ + G I     P   +      +   +  +   
Sbjct: 31  GLMIFVDPNDFKPQIEQAVVENTGRELTIDGDISWAFWPRFGLNIGHTELSNADGYTARV 90

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI----- 134
            ++I+ + +  + LPLL G +    +Y+D    N  + S G +NW               
Sbjct: 91  FAEIDEVDVGIQVLPLLKGAVEADVIYLDGLVANLEVKSSGKTNWDDFVEADGRPASVKE 150

Query: 135 -------------------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ------- 168
                                + L  IHV+  ++   D        L D N +       
Sbjct: 151 GPRAATVNQGDQATGLASLPPIRLGGIHVRDAQVNYSDLSGGMAAMLEDFNFKTGPIVLW 210

Query: 169 ----------ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218
                     I  ++  +++      +  + + +     ++ +   K     P  N ++S
Sbjct: 211 EPISFEGDFTIENKYPELLAEFDYSGVLTAKVLDDKFALNDFKLGLKAQ-GEPVPNGSVS 269

Query: 219 LKIQLFPLAYPIIIDLF-GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF 276
           L +     A           L     +    G  SV G     ++ +++  K  +    
Sbjct: 270 LSLAADVSADTAAETAELAKLQIKLDETTIDGKASVKGFSEPAIDFDVAVDKLNVDHYL 328


>gi|226942611|ref|YP_002797684.1| hypothetical protein Avin_04540 [Azotobacter vinelandii DJ]
 gi|226717538|gb|ACO76709.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
          Length = 748

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/417 (12%), Positives = 111/417 (26%), Gaps = 82/417 (19%)

Query: 21  FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK-EDGSF 79
           F +    D  D++++  + A      ++ + G I   + P+  +  +   +         
Sbjct: 24  FALTQLFDPNDYKDEIRQLARDKANLELTLNGDIGWSLFPWLGLQLQQTSVASARTPDQP 83

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN--- 136
            + ++ + +    LPLL  EI++ D+ +D   L+     +G  NW               
Sbjct: 84  FADLDMIGLSVRVLPLLRREIQMSDIRVDGLELHLRRDKQGRGNWEDIGRPARTAGQPEP 143

Query: 137 -----------------------------VILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
                                        + ++ + +   R+  +D+ S Q +    + L
Sbjct: 144 EATAGTDTAPAEAPAAADAADAGSARALRLDIDSLALNNARVDYLDERSGQKFSAESIQL 203

Query: 168 QISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNKA 216
              A   +   PL + +  GS           EG   FD+    F       +  A  + 
Sbjct: 204 NSGAIRPDSDIPLKLTAFFGSNQPVMRARTDLEGVLRFDSALQRFQLGNARLSGEASGEP 263

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV----------------------- 253
           +  K   F     ++ DL   +       + +                            
Sbjct: 264 LKGKSLNFAAQGELLADLAAQVAEWNGLKLSANQLRAIGELKVRELDKIPQLSGGLSIAQ 323

Query: 254 ---------AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
                     G          S  +  L+     S   V   +  L+       +    +
Sbjct: 324 FNPREFLAGLGQELPATADPASLTRLELTTQLGGSPSAVAFDKLDLKL----DDSQFTGR 379

Query: 305 TKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359
             V+      L     G +   D  L       E     +  ++K        N   
Sbjct: 380 IAVADLARQALRVQLKGDKLDLDRYLAPKSEKREAAGAARQAEVKGAVASAIQNSDT 436


>gi|127513044|ref|YP_001094241.1| AsmA family protein [Shewanella loihica PV-4]
 gi|126638339|gb|ABO23982.1| AsmA family protein [Shewanella loihica PV-4]
          Length = 614

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/362 (13%), Positives = 105/362 (29%), Gaps = 30/362 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           + +LI    LF +++     + L  D  DF+           G+ + +K  +     P  
Sbjct: 5   KWLLIVFASLFLLLIA---YLTLIFDPNDFKPQIVEAVKKQTGRDLVIKQDLSWTFFPSI 61

Query: 63  SVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            +   DI +   E        K++G+      +PLLS E+ +  + +D   LNF     G
Sbjct: 62  GIALGDISLSNPEGFKHDTMLKVDGIVAEVALMPLLSKEVEIAQLNLDGLTLNFDSYKNG 121

Query: 121 VSNW-------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
            S+                             + ++ +  I +   ++ + D+ + +   
Sbjct: 122 RSSMDGLTSTGEKADKAGDKTGSDGAAQVSVQLSSLNIGGIAITNTQVNLYDEATGKTQA 181

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221
           L+  +L +    L   + L           + +     +       A    K+  I   +
Sbjct: 182 LTLESLTLGEFSLGQFADLGYKFSMTQPEMKVSSQGKGQIKVDPSLAKIAIKDFEIENSL 241

Query: 222 QLFPLAYP-IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN----LELSAKKSRLSGNF 276
           +   +    + I+L   L  +      + V S              +   AK   +  + 
Sbjct: 242 EGDAIPNKRMNINLTTQLELDNNAKTMALVLSSLNVEQIKAQGKMSVNYGAKVPDVVASM 301

Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEE 336
              D +V                    +      E +L        +   D       + 
Sbjct: 302 SFGDVDVT-PFMAKDDGTKGEDKTAKGEGTAPAKEPDLSGMKAVNLKLDLDAKSVTADKI 360

Query: 337 EE 338
           + 
Sbjct: 361 KT 362


>gi|167845444|ref|ZP_02470952.1| AsmA family protein [Burkholderia pseudomallei B7210]
          Length = 251

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 16/177 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  +F+V+           DW   +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      I I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
             P L+    + G +NW    ++S       V L       G +   D  +     +
Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183


>gi|167823909|ref|ZP_02455380.1| AsmA family protein [Burkholderia pseudomallei 9]
          Length = 238

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 16/177 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  +F+V+           DW   +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      I I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
             P L+    + G +NW    ++S       V L       G +   D  +     +
Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183


>gi|167815495|ref|ZP_02447175.1| AsmA family protein [Burkholderia pseudomallei 91]
          Length = 244

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 16/177 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  +F+V+           DW   +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      I I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
             P L+    + G +NW    ++S       V L       G +   D  +     +
Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183


>gi|167719311|ref|ZP_02402547.1| AsmA family protein [Burkholderia pseudomallei DM98]
 gi|167893988|ref|ZP_02481390.1| AsmA family protein [Burkholderia pseudomallei 7894]
          Length = 241

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 16/177 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  +F+V+           DW   +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      I I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
             P L+    + G +NW    ++S       V L       G +   D  +     +
Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183


>gi|217973502|ref|YP_002358253.1| AsmA family protein [Shewanella baltica OS223]
 gi|217498637|gb|ACK46830.1| AsmA family protein [Shewanella baltica OS223]
          Length = 607

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/343 (11%), Positives = 119/343 (34%), Gaps = 25/343 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +   L  + +++L+    + +F D  DF+ +         G+++ +   +     P 
Sbjct: 1   MKFIKWLLALVVTLILLVTVYLTVFFDPNDFKPEIVDAVKKQTGRELVIADDLSWTFFPV 60

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    + +   E  +     ++         +PL S +I + ++ +D   +N      
Sbjct: 61  IGINLGGVSLSNPEGFTPKAMLEVNKAVAEVALMPLFSQQIEIAELSLDGATINLVTRKN 120

Query: 120 GVSNW--------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
           G S++                  S+   ++ + +  I +   +I +ID+   Q    +  
Sbjct: 121 GTSSFDGLSGDNSKKAATPAAETSSNAKLNEINIGGISITNTQINMIDEAKKQTQVFTLK 180

Query: 166 NLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221
           +  +    L   +P++ +        +V +EG G     R   ++  N    +  +  + 
Sbjct: 181 SFTLGEFALEQFAPIAFEFSATMPDMTVSSEGKGELKLSRDFTQLVVNGLKIDTVVEGE- 239

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLL-NLELSAKKSRLSGNFKIS 279
            +        I L   +  +++Q        + A   +     +  + K  +++ +F++ 
Sbjct: 240 SIPNKKLETSISLATQIALDKQQLSVDIAQLTAASITAAGKVGVNYATKIPQINADFQVG 299

Query: 280 DGNVR--ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320
           D ++   + + +  ++   +        +        L+    
Sbjct: 300 DIDLDTLLPKTETAAVTEQAPAASTQAVEPDLSALKQLDVKLK 342


>gi|86748582|ref|YP_485078.1| AsmA [Rhodopseudomonas palustris HaA2]
 gi|86571610|gb|ABD06167.1| AsmA [Rhodopseudomonas palustris HaA2]
          Length = 654

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 64/346 (18%), Positives = 120/346 (34%), Gaps = 34/346 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R+ I +  L ++ ++GA  + L ID    R+  E Q     G ++AV G I+I I P 
Sbjct: 5   IKRLGISVAALIALAVIGALALSLLIDRGAMRQAVETQLRAATGLELAVDGDIEIAIFPL 64

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V FK +R+   +DG       +E L+     LPLL     + D+ + +P +     + 
Sbjct: 65  SYVTFKAVRLKGSDDGDADSALGVETLTANLRLLPLLLRRFEIADIALIRPTIRVVRDAD 124

Query: 120 GVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
           G SNW        R     +   V   +I ++ G +   D        LSD++L      
Sbjct: 125 GGSNWTPFIKSLTRTMKPGLDDQVSFSEIRLQDGVLSYRDAAGQISETLSDIDL------ 178

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPIII 232
                 L+  SI  +  A G  ++  +R    I+        A     ++L     P+ +
Sbjct: 179 -----SLAWPSISRTFAAAGQFDWRGERLDGSISVGDFIAALAGERSGLKLRLAGAPLKL 233

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVR 284
              G +  N+   +  G  S      +        +           +     +    + 
Sbjct: 234 AFDGAIA-NKSSLVLEGTLSADSASLRNALRWAGQEPPGAGGFGRFAMKARANLVGPAIA 292

Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330
           ++   ++          +     +    N        A  M D+  
Sbjct: 293 LTNVNIEL----DKNVAEGVMTYTIAG-NHRGLQATLAAGMIDVTP 333


>gi|134295807|ref|YP_001119542.1| AsmA family protein [Burkholderia vietnamiensis G4]
 gi|134138964|gb|ABO54707.1| AsmA family protein [Burkholderia vietnamiensis G4]
          Length = 753

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 77/241 (31%), Gaps = 35/241 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           + +    +  + +V++  A       DW   +       +  +G+  A+ G +K+     
Sbjct: 7   IGKSAAWIVGIVAVIIAAAGIFIFTFDWNRAKPWVNEHVSAALGRPFAINGDLKLGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+PS+    + I   +   G     ++        LPL + +I +  + +
Sbjct: 67  IGETGWRAWVPWPSLSATQLEIGNPDWAQGQKFVTLDAAHFDLAILPLFAHQIVIPSIDV 126

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P ++    + G + W  +           V L+      G I   D        ++  
Sbjct: 127 VNPAVDLERLADGRNTWTFQFKQSGQPSKWQVRLKSFAFAKGTIVYRDA-------ITKA 179

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
           +L I+   L    PL            G      ++++   +A    K  A  L  +   
Sbjct: 180 DLTIAVDTLGKPIPL------------GDVLKQQEQTSRAASAQRVGKRGAAQLSAKANA 227

Query: 226 L 226
            
Sbjct: 228 D 228


>gi|114563380|ref|YP_750893.1| AsmA family protein [Shewanella frigidimarina NCIMB 400]
 gi|114334673|gb|ABI72055.1| AsmA family protein [Shewanella frigidimarina NCIMB 400]
          Length = 606

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/371 (10%), Positives = 102/371 (27%), Gaps = 59/371 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ V   L  + ++V+     + +F D  +F+           G+ + +   +   + P 
Sbjct: 1   MKVVKWLLAIVLTIVVGITVYLTMFFDLNNFKPQIVDAVKKQTGRDLQISQDLSWSVFPS 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIE--GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    I +      +  + ++          +PL S +I V  + +D   LN      
Sbjct: 61  LGIKLGGISLSNPNGFTPAAMLDVNEAVANVALMPLFSQQIEVDLLKLDGLTLNLVTQKD 120

Query: 120 GVSNWF--------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
           G +++                  S    +  + +  I +    I IID  S+     S  
Sbjct: 121 GKTSFDGLTAETSAEKPQSTSSNSEAMSLQTLDIGGIELTNTNINIIDMASNTTQTFSLK 180

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
           +  +    L   +         +     T       S+ +         + +++      
Sbjct: 181 SFTLGQFSLGQFADF-------AYEFSATLPDMQLASSGQGKIKVDQALQNVTIN----- 228

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                                +  V    GD      +     +        +    + +
Sbjct: 229 --------------------DFDMVHKAQGDSLPGKAIT---AELSTQMKMALDAKTIEL 265

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDE-ENLLNFSENGAESMHD---LNETDFFEEEEKKN 341
              K+ ++            K++       +  + +  +   D     +    +E E   
Sbjct: 266 QLTKMSAM----DLAATGDIKINYGNSIPKIAMNLDVGDIDVDALLPKQEGDAKENEATP 321

Query: 342 KNDDLKKDDIQ 352
           +    K+ D+ 
Sbjct: 322 ETAPSKEPDLS 332


>gi|295097116|emb|CBK86206.1| Uncharacterized protein involved in outer membrane biogenesis
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 680

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/385 (12%), Positives = 105/385 (27%), Gaps = 43/385 (11%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           RV+     +F +++V    +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   RVISWTAGIFLLLIVVLIIIIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKE 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V   DI +    D        +  +      L LL+  + +  + + Q
Sbjct: 66  ETGWRSWVPWPHVHADDIILGNPPDIPEVTMIHLPRVEATLAPLALLTKTVYLPWIKLQQ 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW           ++      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFDLASSGDKDQNAQPSSWSFRLDNILFDRGRIAIDDKVSKADVE 185

Query: 162 LSDLNLQISARFLNIISP----LSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +    L     F  +           +          G ++ +    K         +++
Sbjct: 186 ILVDPLGKPLPFSEVTGSKAKGDDSKAGDYVFGLTAKGRYNGQPLTGKGKIGGMLALRSE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS----- 270
                +Q    +    +   G +               AGD    L              
Sbjct: 246 GTPFPVQADFRSGNTRVAFVGTVNDPMNMGGVDLQLKFAGDSLGELYDLTGVLLPDTPPF 305

Query: 271 ----RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAES 324
               RL         +V     +  +    +           +       L       + 
Sbjct: 306 ETDGRLVAKINTEKSSVFDYRGFNGRIGDSD----IHGTLTYTTGKPRPKLEGDVESRQL 361

Query: 325 MHDLNETDFFEEEEKKNKNDDLKKD 349
                      +  K  K+ ++KKD
Sbjct: 362 RLADLGPLIGVDSGKGTKSKEVKKD 386


>gi|94311576|ref|YP_584786.1| AsmA [Cupriavidus metallidurans CH34]
 gi|93355428|gb|ABF09517.1| putative outer membrane biogenesis protein (yhjG-like) [Cupriavidus
           metallidurans CH34]
          Length = 735

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/378 (11%), Positives = 99/378 (26%), Gaps = 51/378 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHI------------LPFPSVFFKDIRIDQ 73
             DW   +     + T  +G+  A+ G + +              +P+P +  KDI +  
Sbjct: 31  TFDWNRIKPWLNDKVTQAIGRPFAINGDLTVTWRRAEGEAGWRALVPWPRLSAKDITVGN 90

Query: 74  KEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW--FQRKS 129
            +       + I  L       PLL+ EI V  + +D P +     +   +NW       
Sbjct: 91  PDWAKQPSLATIRELIFILRPAPLLTHEISVPTIVVDSPAVWLERLADRRNNWTFDTGPE 150

Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQE-----SDQVYFLSDLNLQISARFLNIISPLSIDS 184
           T +   ++ + +I ++ G + + D          +  + D  L    R   +       +
Sbjct: 151 TGESPWHLDVGEIVLERGNLSLNDGAEKIELQATLDTIGDQPLYDQERDGALAPSADASA 210

Query: 185 IKGS----------------VIAEGTGNFDNKRSAFKITANFP--AKNKAISLKIQLFPL 226
                               +  +  G+++         A      ++      +Q    
Sbjct: 211 ASAPAGASNKTESKPESRYGIRWKVVGHYNQATINATGKAGTALSLRDTRKPFPLQADVR 270

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFK 277
                  + G L    +         ++GD    L                  RL    K
Sbjct: 271 VGGTRARIEGTLTNPAELGALDVSLVLSGDNMARLYALTGVVLPSTPPYETRGRLVATLK 330

Query: 278 ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEE 337
               +     +  +    +            +    LL+      + +          E 
Sbjct: 331 KGASSYTYRNFTGKVGSSDLGGTLT---FAQRAPRPLLSGELVSKQLLFTDLAPIIGAEA 387

Query: 338 EKKNKNDDLKKDDIQYSV 355
           +      +         V
Sbjct: 388 KPGQAAAESTVKQPANKV 405


>gi|212218484|ref|YP_002305271.1| ASMA [Coxiella burnetii CbuK_Q154]
 gi|212012746|gb|ACJ20126.1| ASMA [Coxiella burnetii CbuK_Q154]
          Length = 508

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 109/317 (34%), Gaps = 30/317 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ ++  +  L  V  +    +   ++  D+++  +       G+ + +KG +    +P+
Sbjct: 11  IKILVSVVAALLLVSTISVVVLTKLVNPNDYKDRIDHYVYNQTGRHLMLKGNVGWSFIPW 70

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V  K + +           + I  + ++  F PLL G + +  + +D+  +N   +  
Sbjct: 71  LGVDLKQVELSNPVGFQGENLANIGEIKIKVRFWPLLMGRVELDKITLDKATINLIKNKN 130

Query: 120 GVSNWFQ-----------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           G  NW Q                  K     +  + +  I+V    I +I+Q+S     L
Sbjct: 131 GKDNWAQWSHSAVTKNNSKNTADNNKKMTAPVTELKIAGINVCNTTINLINQKSSSTTSL 190

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
             +NL        +  P+S+         + T   +  ++ F  T    A         +
Sbjct: 191 KKINLTTGPIGNAVNFPVSM---------QFTLASNQSKNTFNATLTADADLNFQQSNYR 241

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
           L  + +   + L   L       + +   ++      +  L       +L+G  +I+   
Sbjct: 242 LSNIKFNGTL-LRPTLPPVPVNIVTNLTANLNQQNISISPLNSKLANMQLNGKIEINQLQ 300

Query: 283 VRISRYKLQSILPNSST 299
               R  ++    N+  
Sbjct: 301 -TTPRLSIKLGTANTDL 316


>gi|209363974|ref|YP_001424500.2| ASMA [Coxiella burnetii Dugway 5J108-111]
 gi|207081907|gb|ABS77622.2| ASMA [Coxiella burnetii Dugway 5J108-111]
          Length = 508

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 109/317 (34%), Gaps = 30/317 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ ++  +  L  V  +    +   ++  D+++  +       G+ + +KG +    +P+
Sbjct: 11  IKILVSVVAALLLVSTISVVVLTKLVNPNDYKDRIDHYVYNQTGRHLMLKGNVGWSFIPW 70

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V  K + +           + I  + ++  F PLL G + +  + +D+  +N   +  
Sbjct: 71  LGVDLKQVELSNPVGFQGENLANIGEIKIKVRFWPLLMGRVELDKITLDKATINLIKNKN 130

Query: 120 GVSNWFQ-----------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           G  NW Q                  K     +  + +  I+V    I +I+Q+S     L
Sbjct: 131 GKDNWAQWSHSAVTKNNSKNTADNNKKMTAPVTELKIAGINVCNTTINLINQKSSSTTSL 190

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
             +NL        +  P+S+         + T   +  ++ F  T    A         +
Sbjct: 191 KKINLTTGPIGNAVNFPVSM---------QFTLASNQSKNTFNATLTADADLNFQQSNYR 241

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
           L  + +   + L   L       + +   ++      +  L       +L+G  +I+   
Sbjct: 242 LSNIKFNGTL-LRPTLPPVPVNIVTNLTANLNQQNISISPLNSKLANMQLNGKIEINQLQ 300

Query: 283 VRISRYKLQSILPNSST 299
               R  ++    N+  
Sbjct: 301 -TTPRLSIKLGTANTDL 316


>gi|165923353|ref|ZP_02219690.1| AsmA family protein [Coxiella burnetii RSA 334]
 gi|165916679|gb|EDR35283.1| AsmA family protein [Coxiella burnetii RSA 334]
          Length = 502

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/317 (14%), Positives = 110/317 (34%), Gaps = 30/317 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ ++  +  L  V  +    +   ++  D+++  +       G+ + +KG +    +P+
Sbjct: 5   IKILVSVVAALLLVSTISVVVLTKLVNPNDYKDRIDHYVYNQTGRHLMLKGNVGWSFIPW 64

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V  K + +           + I  + ++  F PLL G + +  + +D+  +N   +  
Sbjct: 65  LGVDLKQVELSNPVGFQGENLANIGEIKIKVRFWPLLMGRVELDKITLDKATINLIKNKN 124

Query: 120 GVSNWFQ-----------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           G  NW Q                  K  M  +  + +  I+V    I +I+Q+S     L
Sbjct: 125 GKDNWAQWSHSAVTKNNSKNTADNNKKMMAPVTELKIAGINVCNTTINLINQKSSSTTSL 184

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
             +NL        +  P+S+         + T   +  ++ F  T    A         +
Sbjct: 185 KKINLTTGPIGNAVNFPVSM---------QFTLASNQSKNTFNATLTADADLNFQQSNYR 235

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
           L  + +   + L   L       + +   ++      +  L       +L+G  +I+   
Sbjct: 236 LSNIKFNGTL-LRPTLPPVPVNIVTNLTANLNQQNISISPLNSKLANMQLNGKIEINQLQ 294

Query: 283 VRISRYKLQSILPNSST 299
               R  ++    N+  
Sbjct: 295 -TTPRLSIKLGTANTDL 310


>gi|88811212|ref|ZP_01126468.1| hypothetical protein NB231_10428 [Nitrococcus mobilis Nb-231]
 gi|88791751|gb|EAR22862.1| hypothetical protein NB231_10428 [Nitrococcus mobilis Nb-231]
          Length = 700

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 44/388 (11%), Positives = 117/388 (30%), Gaps = 68/388 (17%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66
           I +  + +++++    V + +D  D+R++ ER      G+++A++G +K+   P+  +  
Sbjct: 2   IAITGVLTLLIIVITAVIVLVDPNDYRDEIERAVATQTGRELAMEGDLKLMFFPWIGLQV 61

Query: 67  KDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124
             +++        +   + +   +  + LPLL G + +  + ++QP ++   + +G+ NW
Sbjct: 62  NKVQLADAPGFGPAPFLQADHAQLALKLLPLLQGNLVLDTLMLNQPRVHLIRNEQGLGNW 121

Query: 125 FQRKSTMDMIHNV--------------------------ILEKIHVKGGRIKIIDQESDQ 158
                                                   L  + ++ GR+   D++S Q
Sbjct: 122 QTFGRPPQAPKRPPEQPAVDLEPGVQPQAQPLPAILQAASLAGLRIRDGRVTWDDRQSGQ 181

Query: 159 VYFLSDLNLQISARFLNIISPLSID---SIKGSVIAEGTG-------------------- 195
              ++ LN       L     +  D    I   +   G                      
Sbjct: 182 HVVITSLNTTAEDIRLGAPISIESDWQGQINDGMDIGGKLTGTVMADPQLQHFDARDLDL 241

Query: 196 -------NFDNKRSAFKITANFPAKNKAISLKI-QLFPLAYPIIIDLFGNLFWNEKQPIY 247
                  +    +   ++ A   A     + ++ +L   A  + I    +    +     
Sbjct: 242 ALNVAGVDIPGGKQQLRLRAQAAADLGQATYRLTELRLDAAGVQITGQLSAQQAKDAVTA 301

Query: 248 SGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN--------SST 299
           +G   +     + +   L            +   + +   +                  +
Sbjct: 302 TGQLQIPEFSPREVLQRLGMAVPNTDDPDVLKRASAQT-EFGYHGGALTIEPLTVRMDDS 360

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHD 327
               + K+        +F  +      D
Sbjct: 361 VLTGQAKLRNFTGPAADFDLSLNGIDVD 388


>gi|206560208|ref|YP_002230972.1| hypothetical protein BCAL1845 [Burkholderia cenocepacia J2315]
 gi|198036249|emb|CAR52145.1| putative membrane protein [Burkholderia cenocepacia J2315]
          Length = 770

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 67/209 (32%), Gaps = 16/209 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           + +    +  + +V++  A       DW   +     Q +  +G+  A+ G +K+     
Sbjct: 7   IGKSAAWIVGIVAVLIAAAGVFLFTFDWNRAKPWVNEQVSAALGRPFAINGDLKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+PS     + I   +         ++        LPLL+ EI +  + +
Sbjct: 67  DGETGWRAWVPWPSFSATQLEIGNPDWAKAPKFVTLDAAHFDLAILPLLAHEIVIPSIDV 126

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P ++    + G + W  +           V L+      G +   D  +     ++  
Sbjct: 127 VNPAVDLERRADGTNTWTFQFKQSSQPSRWKVRLDSFGFAKGTVTYRDAITKADLTIAID 186

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194
            L       +++      S   S    G 
Sbjct: 187 TLGQPIPLGDVLKEQEQTSRAASAQRVGK 215


>gi|213650203|ref|ZP_03380256.1| hypothetical protein SentesTy_24939 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
          Length = 483

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +D+ +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQESGWRSWVPWPHVHAEDVILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    GRI I D+ S     +  ++        + ++     
Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206

Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + K +        +  G ++ +              ++++    +Q    +    +   G
Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286
            +    K          +GD    L                  RL         +V    
Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFNYR 326

Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344
            +  +    +           +       L       +    DL      +      K+ 
Sbjct: 327 GFNGRIGDSD----IHGTFTYTTGKPSPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
           +  K   Q    K  +  +       + F  DK
Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409


>gi|215919070|ref|NP_819951.2| AsmA family protein [Coxiella burnetii RSA 493]
 gi|206583955|gb|AAO90465.2| ASMA [Coxiella burnetii RSA 493]
          Length = 508

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 109/317 (34%), Gaps = 30/317 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ ++  +  L  V  +    +   ++  D+++  +       G+ + +KG +    +P+
Sbjct: 11  IKILVSVVAALLLVSTISVVVLTKLVNPNDYKDRIDHYVYNQTGRHLMLKGNVGWSFIPW 70

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V  K + +           + I  + ++  F PLL G + +  + +D+  +N   +  
Sbjct: 71  LGVDLKQVELSNPVGFQGENLANIGEIKIKVRFWPLLMGRVELDKITLDKATINLIKNKN 130

Query: 120 GVSNWFQ-----------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           G  NW Q                  K     +  + +  I+V    I +I+Q+S     L
Sbjct: 131 GKDNWAQWSHSAVTKNNSKNTADNNKKMTAPVTELKIAGINVCNTTINLINQKSSSTTSL 190

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
             +NL        +  P+S+         + T   +  ++ F  T    A         +
Sbjct: 191 KKINLTTGPIGNAVNFPVSM---------QFTLASNQSKNTFNATLTADADLNFQQSNYR 241

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
           L  + +   + L   L       + +   ++      +  L       +L+G  +I+   
Sbjct: 242 LSNIKFNGTL-LRPTLPPVPVNIVTNLTANLNQQNISISPLNSKLTNMQLNGKIEINQLQ 300

Query: 283 VRISRYKLQSILPNSST 299
               R  ++    N+  
Sbjct: 301 -TTPRLSIKLGTANTDL 316


>gi|167910677|ref|ZP_02497768.1| AsmA family protein [Burkholderia pseudomallei 112]
          Length = 262

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  +F+V+           DW   +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      I I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
             P L+    + G +NW              V L       G +   D  +     +
Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183


>gi|107029048|ref|YP_626143.1| AsmA [Burkholderia cenocepacia AU 1054]
 gi|116689793|ref|YP_835416.1| AsmA family protein [Burkholderia cenocepacia HI2424]
 gi|105898212|gb|ABF81170.1| AsmA [Burkholderia cenocepacia AU 1054]
 gi|116647882|gb|ABK08523.1| AsmA family protein [Burkholderia cenocepacia HI2424]
          Length = 765

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 80/244 (32%), Gaps = 35/244 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           + +    +  + +V++  A       DW   +     Q +  +G+  A+ G +K+     
Sbjct: 7   IGKSAAWIVGIVAVLIAAAGIFIFTFDWNRAKPWVNEQVSTALGRPFAINGDLKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+PS     + I   +         ++        LPLL+ EI +  + +
Sbjct: 67  DGETGWRAWVPWPSFSATQLEIGNPDWAQAPKFVTLDAAHFDLALLPLLAHEIVIPSIDV 126

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P ++    + G + W  +           V L+      G +   D        ++  
Sbjct: 127 VNPAVDLERRADGSNTWTFQFKQSSQPSRWKVRLDSFGFAKGTVTYRDA-------ITKA 179

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
           +L ++   L    PL            G    + ++++   +A    K+ A  L  +   
Sbjct: 180 DLTVAIDTLGQPIPL------------GDVLKEQEQTSRAASAQRVGKHGAAQLGAKADA 227

Query: 226 LAYP 229
            A  
Sbjct: 228 QAAS 231


>gi|212212616|ref|YP_002303552.1| AsmA [Coxiella burnetii CbuG_Q212]
 gi|212011026|gb|ACJ18407.1| AsmA [Coxiella burnetii CbuG_Q212]
          Length = 508

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 109/317 (34%), Gaps = 30/317 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ ++  +  L  V  +    +   ++  D+++  +       G+ + +KG +    +P+
Sbjct: 11  IKILVSVVAALLLVSTISVVVLTKLVNPNDYKDRIDHYVYNQTGRHLMLKGNVGWSFIPW 70

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V  K + +           + I  + ++  F PLL G + +  + +D+  +N   +  
Sbjct: 71  LGVDLKQVELSNPLGFQGENLANIGEIKIKVRFWPLLMGRVELDKITLDKATINLIKNKN 130

Query: 120 GVSNWFQ-----------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           G  NW Q                  K     +  + +  I+V    I +I+Q+S     L
Sbjct: 131 GKDNWAQWSHSAVTKNNSKNTADNNKKMTAPVTELKIAGINVCNTTINLINQKSSSTTSL 190

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
             +NL        +  P+S+         + T   +  ++ F  T    A         +
Sbjct: 191 KKINLTTGPIGNAVNFPVSM---------QFTLASNQSKNTFNATLTADADLNFQQSNYR 241

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
           L  + +   + L   L       + +   ++      +  L       +L+G  +I+   
Sbjct: 242 LSNIKFNGTL-LRPTLPPVPVNIVTNLTANLNQQNISISPLNSKLANMQLNGKIEINQLQ 300

Query: 283 VRISRYKLQSILPNSST 299
               R  ++    N+  
Sbjct: 301 -TTPRLSIKLGTANTDL 316


>gi|290473990|ref|YP_003466864.1| suppressor of ompF assembly mutants [Xenorhabdus bovienii SS-2004]
 gi|289173297|emb|CBJ80072.1| suppressor of ompF assembly mutants [Xenorhabdus bovienii SS-2004]
          Length = 619

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 49/387 (12%), Positives = 120/387 (31%), Gaps = 52/387 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R+L  L  L  V++ G   + + I+  DFR     Q     G  + ++  ++ HI P 
Sbjct: 1   MKRLLTTLVILLVVIVAGLAALVVLINPNDFRSYIVEQVQKKSGYHLVLQDDLRWHIWPK 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    I +   +        E + +  E LPLLS +  V ++ +    L F   S+  
Sbjct: 61  LSILTGQISLTASDAEIPAVVAENMRLDVELLPLLSHQFVVKEVMLKGAVLRFMPDSQPQ 120

Query: 122 SNWFQR---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                                   + + +I V    +     ++D    + D+N  +  +
Sbjct: 121 KQAEAPIAPKSDIQYPVAGGQGWKLDIARIKVADSLLVW-QTDTDSQLNIRDINFLMERK 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
                                    D+    F    N   +  A      +    YP  +
Sbjct: 180 DQ-----------------------DHVNLEFSSKINKNQQELAFEFNTSVDISDYPQRL 216

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                        + S  + + G       ++       +S  ++ S  ++ + +  L  
Sbjct: 217 AAD----------VSSLKYQLKGVGVPSEGIK---GTGSVSLAYQSSPSSISLQKLALTV 263

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDD 350
               + ++ +    V    +     + +  +   D  L      + + +   +  ++   
Sbjct: 264 ----NESELNGNIAVKLQNKPQYTINLSSPKLNLDNLLGWDALPQNDLQARHDYRIENSL 319

Query: 351 IQYSVNKKEEKDNSHDKENQENFSGDK 377
           ++  +       +++D    + F  + 
Sbjct: 320 LKPVIATSVSPLSNYDLSLLKAFEANL 346


>gi|78066539|ref|YP_369308.1| uncharacterized protein involved in outer membrane biogenesis, AsmA
           [Burkholderia sp. 383]
 gi|77967284|gb|ABB08664.1| uncharacterized protein involved in outer membrane biogenesis, AsmA
           [Burkholderia sp. 383]
          Length = 764

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 71/209 (33%), Gaps = 16/209 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           + +    +  + +V++  A       DW   +     Q T  +G+  A+ G +K+     
Sbjct: 7   IGKSAAWIVGIVAVLIAAAGVFLFAFDWNRAKPWVNEQVTAALGRPFAINGDLKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+PS+    + I   +         ++        LPLL+ EI +  + +
Sbjct: 67  DGETGWRAWVPWPSLTATQLEIGNPDWAKTPKFVTLDAAHFDLAILPLLAHEIVIPSIDV 126

Query: 108 DQPHLNFYLSSKGVSNWFQR--KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P ++    + G + W  +  +S+      V L+      G +   D  +     ++  
Sbjct: 127 VNPAVDLERLADGRNTWTFQFKQSSQPSPWKVRLDSFGFAKGTVTYRDAITKADLSVAID 186

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194
            L       +++      S   S    G 
Sbjct: 187 TLGQPIPLGDVLKEQEQTSRAASAQRVGK 215


>gi|161830320|ref|YP_001596769.1| AsmA family protein [Coxiella burnetii RSA 331]
 gi|161762187|gb|ABX77829.1| AsmA family protein [Coxiella burnetii RSA 331]
          Length = 502

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 109/317 (34%), Gaps = 30/317 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ ++  +  L  V  +    +   ++  D+++  +       G+ + +KG +    +P+
Sbjct: 5   IKILVSVVAALLLVSTISVVVLTKLVNPNDYKDRIDHYVYNQTGRHLMLKGNVGWSFIPW 64

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V  K + +           + I  + ++  F PLL G + +  + +D+  +N   +  
Sbjct: 65  LGVDLKQVELSNPVGFQGENLANIGEIKIKVRFWPLLMGRVELDKITLDKATINLIKNKN 124

Query: 120 GVSNWFQ-----------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           G  NW Q                  K     +  + +  I+V    I +I+Q+S     L
Sbjct: 125 GKDNWAQWSHSAVTKNNSKNTADNNKKMTAPVTELKIAGINVCNTTINLINQKSSSTTSL 184

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
             +NL        +  P+S+         + T   +  ++ F  T    A         +
Sbjct: 185 KKINLTTGPIGNAVNFPVSM---------QFTLASNQSKNTFNATLTADADLNFQQSNYR 235

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
           L  + +   + L   L       + +   ++      +  L       +L+G  +I+   
Sbjct: 236 LSNIKFNGTL-LRPTLPPVPVNIVTNLTANLNQQNISISPLNSKLTNMQLNGKIEINQLQ 294

Query: 283 VRISRYKLQSILPNSST 299
               R  ++    N+  
Sbjct: 295 -TTPRLSIKLGTANTDL 310


>gi|82701212|ref|YP_410778.1| AsmA [Nitrosospira multiformis ATCC 25196]
 gi|82409277|gb|ABB73386.1| AsmA [Nitrosospira multiformis ATCC 25196]
          Length = 506

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 98/328 (29%), Gaps = 34/328 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R        L  ++L G   + +  D   ++ +  R       + + + G I +   P P
Sbjct: 9   RWAFFLFAGLTILLLGGIIYIFVIFDPNAYKPEIIRLVKEKKERMLRLDGPITLVFFPSP 68

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            +    + + +       + IE + +  E LPLL  E+ + ++ I     N    S G +
Sbjct: 69  GLKLSGLFLSEHNRDEEFATIEKVHVSLEILPLLRKELVLNEISITGLKANLIRFSDGST 128

Query: 123 NWFQ--RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
           N     R           + ++H++   +   D+ SD  +   ++ L   A   +  +  
Sbjct: 129 NIDDLIRSEEQRERFRFDIGRVHMEKTLLAFRDEGSDTHFVFRNIGL--EADRADERADS 186

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
             D+I+  V                                +   +     +     L  
Sbjct: 187 EEDAIRSKVELAFNIAL-----------------------PEHAEVDIATRVRFHLTLNA 223

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300
             +    +G+   A          L   +   S +F    G +    +     + N  + 
Sbjct: 224 ERQYFALNGMNLAAEAQLPGTGRLLIQSRGNFSASFLEEGGELGADEFTFDVGIRNVDSS 283

Query: 301 EDNKTKVSQDEENLLNFSENGAESMHDL 328
            +          N ++    G + + D 
Sbjct: 284 FNI-------GVNAVHLGLKGQKVIADK 304


>gi|164685715|ref|ZP_01947125.2| AsmA family protein [Coxiella burnetii 'MSU Goat Q177']
 gi|164601222|gb|EAX32251.2| AsmA family protein [Coxiella burnetii 'MSU Goat Q177']
          Length = 502

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 109/317 (34%), Gaps = 30/317 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ ++  +  L  V  +    +   ++  D+++  +       G+ + +KG +    +P+
Sbjct: 5   IKILVSVVAALLLVSTISVVVLTKLVNPNDYKDRIDHYVYNQTGRHLMLKGNVGWSFIPW 64

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V  K + +           + I  + ++  F PLL G + +  + +D+  +N   +  
Sbjct: 65  LGVDLKQVELSNPVGFQGENLANIGEIKIKVRFWPLLMGRVELDKITLDKATINLIKNKN 124

Query: 120 GVSNWFQ-----------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           G  NW Q                  K     +  + +  I+V    I +I+Q+S     L
Sbjct: 125 GKDNWAQWSHSAVTKNNSKNTADNNKKMTAPVTELKIAGINVCNTTINLINQKSSSTTSL 184

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
             +NL        +  P+S+         + T   +  ++ F  T    A         +
Sbjct: 185 KKINLTTGPIGNAVNFPVSM---------QFTLASNQSKNTFNATLTADADLNFQQSNYR 235

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
           L  + +   + L   L       + +   ++      +  L       +L+G  +I+   
Sbjct: 236 LSNIKFNGTL-LRPTLPPVPVNIVTNLTANLNQQNISISPLNSKLANMQLNGKIEINQLQ 294

Query: 283 VRISRYKLQSILPNSST 299
               R  ++    N+  
Sbjct: 295 -TTPRLSIKLGTANTDL 310


>gi|170733135|ref|YP_001765082.1| AsmA family protein [Burkholderia cenocepacia MC0-3]
 gi|169816377|gb|ACA90960.1| AsmA family protein [Burkholderia cenocepacia MC0-3]
          Length = 765

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 67/209 (32%), Gaps = 16/209 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           + +    +  + +V++  A       DW   +     Q +  +G+  A+ G +K+     
Sbjct: 7   IGKSAAWIVGIVAVLIAAAGIFIFTFDWNRAKPWVNEQVSTALGRPFAINGDLKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+PS     + I   +         ++        LPLL+ EI +  + +
Sbjct: 67  DGETGWRAWVPWPSFSATQLEIGNPDWAQAPKFVTLDAAHFDLALLPLLAHEIVIPSIDV 126

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P ++    + G + W  +           V L+      G +   D  +     ++  
Sbjct: 127 VNPAVDLERRADGSNTWTFQFKQSSQPSRWKVRLDSFGFAKGTVTYRDAITKADLTVAID 186

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194
            L       +++      S   S    G 
Sbjct: 187 TLGQPIPLGDVLKEQEQTSRAASAQRVGK 215


>gi|114570401|ref|YP_757081.1| AsmA family protein [Maricaulis maris MCS10]
 gi|114340863|gb|ABI66143.1| AsmA family protein [Maricaulis maris MCS10]
          Length = 709

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 111/320 (34%), Gaps = 27/320 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R+ + LG +  +++  AF +P  I  + +R+  E  A   + + + + G I + ILP 
Sbjct: 1   MKRLGLALGLIIVLLIAAAFILPSVIPTSTYRDPVETAARDALNRDVTLGGDISLQILPQ 60

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +   ++ I   +       +++  + +    +PLLS  + + +  + +P +    + +
Sbjct: 61  LQIRASEVSIANVDGFGDEAFAEMREMRVGLRLIPLLSRRVEITEFVLVEPTIRLAQNRR 120

Query: 120 GVSNWFQRKSTMDM-----------------IHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           G +  F                                 + ++ G +   D    +    
Sbjct: 121 GNNWTFTAPDADMAAPAPAADGGFVRGDGALPIEASFGDVRIENGALHFTDGSETRSITG 180

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN-----FDNKRSAFKITANFPAKNKAI 217
            DLN+ + +         ++++   S+    +       F+ + +   +         + 
Sbjct: 181 LDLNIALPSLDTETRLTGALNADGESLSFTASIGSIRDFFEGRETPVSLGLGGNLAALSF 240

Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
             +I L   A     ++  N+        ++G    AGD  +      +   +   G   
Sbjct: 241 DGRI-LAGEAIAYDGEIDANIPSLRALAAFAGSPLPAGDNLEAFRAVGNLSGTP--GELA 297

Query: 278 ISDGNVRISRYKLQSILPNS 297
           +    +R+     Q+ L  +
Sbjct: 298 LQARTLRLDAISGQADLTVN 317


>gi|330817130|ref|YP_004360835.1| AsmA family protein [Burkholderia gladioli BSR3]
 gi|327369523|gb|AEA60879.1| AsmA family protein [Burkholderia gladioli BSR3]
          Length = 769

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 66/210 (31%), Gaps = 16/210 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           + +    +  +  V++       L  DW   R     + +  +G+  A++G +K+     
Sbjct: 7   IGKSAAWIVGIILVLITALVVFILTFDWNRARPYINERVSTEIGRPFAIQGDLKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+PS    +I I   +       + ++        LPLL+  + +  + I
Sbjct: 67  SGETGWRAWIPWPSFTANNIVIGNPDWTKSPHFATLDAAHFDLAVLPLLAHRVVIPSIDI 126

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P L+    + G +NW              V L       G +   D  +     ++  
Sbjct: 127 VNPALDIERLADGRNNWTFSFKQSGEPSTWKVELHDFGFAKGTVTYRDAMTKADLNVAID 186

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTG 195
            L        ++      S   S    G  
Sbjct: 187 TLGQPIPLGEVLKQQEATSRAASAQRVGKA 216


>gi|126174217|ref|YP_001050366.1| AsmA family protein [Shewanella baltica OS155]
 gi|125997422|gb|ABN61497.1| AsmA family protein [Shewanella baltica OS155]
          Length = 607

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 109/307 (35%), Gaps = 25/307 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +   L  + +++L+    + +F D  DF+ +         G+++ +   +     P 
Sbjct: 1   MKFIKWLLALVVTLILLVTVYLTVFFDPNDFKPEIVDAVKKQTGRELVIADDLSWTFFPV 60

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    + +   E  +     ++         +PL   +I + ++ +D   +N      
Sbjct: 61  IGINLGGVSLSNPEGFTPKAMLEVNKAVAEVALMPLFRQQIEIAELSLDGATINLVTRKN 120

Query: 120 GVSNW--------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
           G S++                  S+   ++++ +  I +   +I +ID+   Q    +  
Sbjct: 121 GTSSFDGLSGDNSKKAATPAAETSSNAKLNDINIGGISITNTQINMIDEAKKQTQVFTLK 180

Query: 166 NLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221
           +  +    L   +P++ +        +V +EG G     R   ++  N    +  +  + 
Sbjct: 181 SFTLGEFALEQFAPIAFEFSATMPDMTVSSEGKGELKLSRDFTQLVVNGLKIDTVVEGE- 239

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL---NLELSAKKSRLSGNFKI 278
            +        I L   +  +++Q        ++           +  + K  +++ +F++
Sbjct: 240 SIPNKKLETSISLATQIALDKQQLSVDIA-QLSAASITAAGKVGVNYATKIPQINADFQV 298

Query: 279 SDGNVRI 285
            D ++  
Sbjct: 299 GDIDLDT 305


>gi|150261057|ref|ZP_01917785.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|167467306|ref|ZP_02332010.1| hypothetical protein YpesF_05292 [Yersinia pestis FV-1]
 gi|218930982|ref|YP_002348857.1| hypothetical protein YPO3987 [Yersinia pestis CO92]
 gi|229839688|ref|ZP_04459847.1| putative exported protein [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229841771|ref|ZP_04461927.1| putative exported protein [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|294504288|ref|YP_003568350.1| hypothetical protein YPZ3_2178 [Yersinia pestis Z176003]
 gi|115349593|emb|CAL22567.1| putative exported protein [Yersinia pestis CO92]
 gi|149290465|gb|EDM40542.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|229691110|gb|EEO83163.1| putative exported protein [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229696054|gb|EEO86101.1| putative exported protein [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|294354747|gb|ADE65088.1| hypothetical protein YPZ3_2178 [Yersinia pestis Z176003]
          Length = 740

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 50/410 (12%), Positives = 108/410 (26%), Gaps = 91/410 (22%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           +VL+G      + LV         DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KVLVGASGFILLSLVAVVIFVSSFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGE 65

Query: 58  ------ILPFPSVFFKDIRIDQKE-----------------------DGSFESKIEGLSM 88
                  +P+P +  +D+ +                                  ++ +  
Sbjct: 66  GPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSAQGTPLSDAFPTGEMVTLKRIDA 125

Query: 89  RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVK 145
               L LLS E+R+  +++ QP ++    + G +NW       ST     +V +  I   
Sbjct: 126 SLAPLSLLSKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSASWSVDIGDIIFD 185

Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI--------------- 190
            G I + D    Q   L+ ++    A     ++ +   +   SV                
Sbjct: 186 RGEITLKDAIL-QADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSVNTTTPVNTTT 244

Query: 191 ----------------------AEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPL 226
                                  +  G +  +  A            +  +   +Q    
Sbjct: 245 ATATTNPVTETVKSTTPDYLFGWKVDGQYQGQPLAGSGKIGGMISMNDANVPFPLQADMR 304

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFK 277
               ++ + G L              ++G     L   L               LS   K
Sbjct: 305 YGSTLVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLSARLK 364

Query: 278 ISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
            + G V     +  +    +   D              L    +  +   
Sbjct: 365 QAGGAVYHYENFNGKIGDSDIHGDLT---YTDSQPRPKLAGQVDSEKLRF 411


>gi|254245349|ref|ZP_04938670.1| AsmA [Burkholderia cenocepacia PC184]
 gi|124870125|gb|EAY61841.1| AsmA [Burkholderia cenocepacia PC184]
          Length = 788

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 79/241 (32%), Gaps = 35/241 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           + +    +  + +V++  A       DW   +     Q +  +G+  A+ G +++     
Sbjct: 30  IGKSAAWIVGIVAVLIAAAGIFIFTFDWNRAKPWVNEQVSTALGRPFAINGDLRVGWRRP 89

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+PS     + I   +         ++        LPLL+ EI +  + +
Sbjct: 90  DGETGWRAWVPWPSFSATQLEIGNPDWAQAPKFVTLDAAHFDLALLPLLAHEIVIPSIDV 149

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P ++    + G + W  +           V L+      G +   D        ++  
Sbjct: 150 VNPAVDLERRADGSNTWTFQFKQSSQPSRWKVRLDSFGFAKGTVTYRDA-------ITKA 202

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
           +L ++   L    PL            G    + ++++   +A    K+ A  L  +   
Sbjct: 203 DLAVAIDTLGQPIPL------------GDVLKEQEQTSRAASAQRVGKHGAAQLGAKADA 250

Query: 226 L 226
            
Sbjct: 251 Q 251


>gi|330807022|ref|YP_004351484.1| AsmA family protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375130|gb|AEA66480.1| Conserved hypothetical protein; putative AsmA family protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 743

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 51/432 (11%), Positives = 118/432 (27%), Gaps = 75/432 (17%)

Query: 18  VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KED 76
              F +    D  D++E+  + A      ++ + G I   + P+  +   D  +      
Sbjct: 21  ALGFALTHLFDPNDYKEEIRQIARDKAHIELTLNGDIGWSLFPWLGLELHDASVATLASP 80

Query: 77  GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---------- 126
               + ++ L +    +PLL  E+++ D+ ++  +L       G  NW            
Sbjct: 81  TQPFADLQMLGLSVRVIPLLRREVQMSDVRVEGLNLRLNRDKNGHGNWEDIGKVPASAST 140

Query: 127 ------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
                                       + ++ + V   R++  D+++ +++    + L 
Sbjct: 141 ANAPAPVPAEQPTPPVSTPAEKPAQPTRLDIDSLTVNNARVEYTDEQTGKLFTAESIQLS 200

Query: 169 ISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNKAI 217
                 +   P+++ +   S            G   F+     +    +  +  A    +
Sbjct: 201 TGPVHDSTNIPVTLTAFLSSNQPAVRVRTEVTGELRFERALKRYKFEDLKLSGEATGDPL 260

Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEK---------------------QPIYSGVFSVAGD 256
             K   F     + +D   N+                           P  +G  S+A  
Sbjct: 261 QGKTLNFAAQGQLFLDKAANVAEWTGIKLSLNQLRALGELKVNDLDKTPQLNGGVSIAQF 320

Query: 257 FSKL----------LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
                            E S  K  LS     +  +V  +   ++    N       +  
Sbjct: 321 DLAKFVDSVGQKLPAMAEGSLSKVELSSRIAGTPTSVEFNDINMKVDDSN----FSGRIA 376

Query: 307 VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHD 366
           V    +  L           D        E +      + +  + + S            
Sbjct: 377 VEDFAKQSLRAQLKADTFNVDRYLAPKSAEADSSKAAREAEVSNTEASAMVGAGSTPLPS 436

Query: 367 KENQENFSGDKM 378
              Q  +S D++
Sbjct: 437 APTQGAWSNDRL 448


>gi|288576062|ref|ZP_05978114.2| AsmA family protein [Neisseria mucosa ATCC 25996]
 gi|288566315|gb|EFC87875.1| AsmA family protein [Neisseria mucosa ATCC 25996]
          Length = 710

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 44/390 (11%), Positives = 115/390 (29%), Gaps = 33/390 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+ V+  +  L         +V             +   +   G+ I     I+    P 
Sbjct: 13  LKTVVTAVILLVCTAAALYASVYALFTPERIETTVQNAFSG-TGRNIRFSSDIRRSWFPR 71

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I +         I+   +   +  L +    +    I         +  G 
Sbjct: 72  PTVTLKNVTITRPHSNQTALHIKETRIGLGWSSLWNDYPFIEKWVITGADAVLSRTDDGK 131

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII---S 178
            N               L ++ ++   + +    + Q + + +  L +     +      
Sbjct: 132 WNLQDLLHPSHPT---SLNRLIIENSSLHMN--IAGQAHIIDNFYLNVRNDGADGRPFKI 186

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
             S+     S+  +G+G F+  ++ + I          +  +  +      +  D  G  
Sbjct: 187 NGSLRRPNQSIQWQGSGVFNASKTGWSIP--------NLLWEASVAEKESKLSADGNGTW 238

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
            W+ +              +   N  L+A+  RLS    + +  + I             
Sbjct: 239 TWSSENDSLKADNLSLRTDNPAQNFHLTAQIPRLS----LKNNVLNIPSLNGAFTAGKPE 294

Query: 299 TDEDNKTKVSQDEEN-------LLNFSEN----GAESMHDLNETDFFEEEEKKNKNDDLK 347
           +  +   K+ +              F+ +      ++   L     +++ +   ++  + 
Sbjct: 295 SQWNGSFKLDKASIRTSVATLDNFEFNASHKNAAHQTNLTLTGPLLWQQNKG-LQSSPIN 353

Query: 348 KDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
              +Q +VN+              N++G +
Sbjct: 354 LTTLQDTVNRLPNPRFISQLTGSFNWNGKE 383


>gi|22127713|ref|NP_671136.1| hypothetical protein y3842 [Yersinia pestis KIM 10]
 gi|45443099|ref|NP_994638.1| hypothetical protein YP_3350 [Yersinia pestis biovar Microtus str.
           91001]
 gi|108809806|ref|YP_653722.1| hypothetical protein YPA_3815 [Yersinia pestis Antiqua]
 gi|108813797|ref|YP_649564.1| hypothetical protein YPN_3637 [Yersinia pestis Nepal516]
 gi|229836432|ref|ZP_04456599.1| putative exported protein [Yersinia pestis Pestoides A]
 gi|229904309|ref|ZP_04519420.1| putative exported protein [Yersinia pestis Nepal516]
 gi|270488083|ref|ZP_06205157.1| AsmA family protein [Yersinia pestis KIM D27]
 gi|21960834|gb|AAM87387.1|AE013988_1 hypothetical protein y3842 [Yersinia pestis KIM 10]
 gi|45437966|gb|AAS63515.1| Uncharacterized protein involved in outer membrane biogenesis
           [Yersinia pestis biovar Microtus str. 91001]
 gi|108777445|gb|ABG19964.1| hypothetical protein YPN_3637 [Yersinia pestis Nepal516]
 gi|108781719|gb|ABG15777.1| hypothetical protein YPA_3815 [Yersinia pestis Antiqua]
 gi|229678427|gb|EEO74532.1| putative exported protein [Yersinia pestis Nepal516]
 gi|229706500|gb|EEO92507.1| putative exported protein [Yersinia pestis Pestoides A]
 gi|262363691|gb|ACY60412.1| hypothetical protein YPD4_3508 [Yersinia pestis D106004]
 gi|262367625|gb|ACY64182.1| hypothetical protein YPD8_3514 [Yersinia pestis D182038]
 gi|270336587|gb|EFA47364.1| AsmA family protein [Yersinia pestis KIM D27]
          Length = 738

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 50/410 (12%), Positives = 108/410 (26%), Gaps = 91/410 (22%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           +VL+G      + LV         DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KVLVGASGFILLSLVAVVIFVSSFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGE 65

Query: 58  ------ILPFPSVFFKDIRIDQKE-----------------------DGSFESKIEGLSM 88
                  +P+P +  +D+ +                                  ++ +  
Sbjct: 66  GPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSAQGTPLSDAFPTGEMVTLKRIDA 125

Query: 89  RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVK 145
               L LLS E+R+  +++ QP ++    + G +NW       ST     +V +  I   
Sbjct: 126 SLAPLSLLSKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSASWSVDIGDIIFD 185

Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI--------------- 190
            G I + D    Q   L+ ++    A     ++ +   +   SV                
Sbjct: 186 RGEITLKDAIL-QADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSVNTTTPVNTTT 244

Query: 191 ----------------------AEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPL 226
                                  +  G +  +  A            +  +   +Q    
Sbjct: 245 ATATTNPVTETVKSTTPDYLFGWKVDGQYQGQPLAGSGKIGGMISMNDANVPFPLQADMR 304

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFK 277
               ++ + G L              ++G     L   L               LS   K
Sbjct: 305 YGSTLVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLSARLK 364

Query: 278 ISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
            + G V     +  +    +   D              L    +  +   
Sbjct: 365 QAGGAVYHYENFNGKIGDSDIHGDLT---YTDSQPRPKLAGQVDSEKLRF 411


>gi|78356075|ref|YP_387524.1| hypothetical protein Dde_1028 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218480|gb|ABB37829.1| Uncharacterized protein involved in outer membrane biogenesis-like
           protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 725

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 48/412 (11%), Positives = 125/412 (30%), Gaps = 67/412 (16%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR V + +  LF+++   A       D  D++    R+     G+ + + G +++ + P+
Sbjct: 5   LRTVSVIILVLFALLAGAAGIFVATFDPNDYKSLITREVQKATGRTLVLTGTLELSLFPW 64

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    + +            + E L + A   PLL  E+ +  + +    ++   + K
Sbjct: 65  IGISTGPLLLGNPAGFGEDAFLRAEDLQLHARLRPLLHKELHIDRVVLSGVSVHLMRNVK 124

Query: 120 GVSNWFQRKSTMDMIH--------------------NVILEKIHVKGGRIKIIDQESDQV 159
           G  NW    +   +                         ++ + V+   ++  D ++   
Sbjct: 125 GAPNWLFSPAGNALPPAGTDTAPSGASQAAAGAGLAAFSVQSVQVRDASVQYTDMQTGLA 184

Query: 160 YFLSDLNLQISARFLNIISPLSIDS--IKGSVIAEGTGNF-------------DNKRSAF 204
              + ++L  +A      S +S++   +  S   +GT +                  ++ 
Sbjct: 185 AAATGISLTTTAIAPGRTSDISLEGNWLLTSPDMQGTASLTTRLELGETLETVTAADTSL 244

Query: 205 KITANFPA-----KNKAISLKIQLFPLAYPIIID----------LFGNLFWNEKQPIYSG 249
           +ITA+ P+          +  ++       +  +          L G +  +  +     
Sbjct: 245 RITASGPSVPSGRATLEAAGDLRFNMPDMTVTANGLRISTMDSTLTGTISADLMRNAVQA 304

Query: 250 VF--------SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
                     ++      L   + +A   +   N   +   + + R   +       T  
Sbjct: 305 SIHAESPLRRTLEQLGMPLQLPDDTALALQADINLTAAADRLTVHRLTGRL----DKTAF 360

Query: 302 DNKTKVSQDEENLLNFSENGAESMHDL---NETDFFEEEEKKNKNDDLKKDD 350
                +       + F+    +   D+    E      E ++       K  
Sbjct: 361 SGNATLVPGVSPDIRFALAADKVNLDMYLPQEQSMKNAEPQQTGKSASGKPA 412


>gi|310765800|gb|ADP10750.1| AsmA family protein [Erwinia sp. Ejp617]
          Length = 684

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 46/357 (12%), Positives = 100/357 (28%), Gaps = 40/357 (11%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQKE 75
           DW   +    R+ +  + +  A++G + +              +P+P V  +DI +    
Sbjct: 30  DWNRLKPIINRKVSAEINRPFAIRGDLGVSWQRNRNEPGWHGWVPWPQVHAQDIMLGNPP 89

Query: 76  DGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ------- 126
           D        ++ +      L LLS +I +  + + QP      ++ G +NW         
Sbjct: 90  DVPDVTMVHLQRVEATLSPLALLSQQIYLPRIALQQPQAKLVQTADGKNNWTFNLAGSDN 149

Query: 127 -RKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLNLQISARFLNIISPLSID 183
            + S      +  L+ I    G +   D   ++D    +  L   +    L         
Sbjct: 150 QQASKEPSAWSFRLDSIAFDRGTVSYRDAINKADVQVVVDPLGKAVPYAQLAGGDDKQKG 209

Query: 184 SIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
           +         +G ++N++   +         +++     +          + + G +   
Sbjct: 210 AADFVFGWRASGTYNNEKLRGEGKIGGMLSLRSQNTPFPVAADVHNGTTRVRIAGTVQDP 269

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQ 291
                       +GD    L                   L+  F+  DG V R   +   
Sbjct: 270 MNLGGVDLRLRFSGDTLANLYGLTGVLLPETPPYETDGHLTARFQQPDGAVFRYQNFNGH 329

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDDLK 347
               +                  L  +    +    DL      +  +   K    K
Sbjct: 330 IGDSDIRGSL---AYRQGKPRPELTGTLESLQLRVADLGPLIGVDSGKDSAKTARAK 383


>gi|304408604|ref|ZP_07390225.1| AsmA family protein [Shewanella baltica OS183]
 gi|307305432|ref|ZP_07585180.1| AsmA family protein [Shewanella baltica BA175]
 gi|304352425|gb|EFM16822.1| AsmA family protein [Shewanella baltica OS183]
 gi|306911735|gb|EFN42160.1| AsmA family protein [Shewanella baltica BA175]
          Length = 607

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 39/343 (11%), Positives = 120/343 (34%), Gaps = 25/343 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +   L  + +++L+    + +F D  DF+ +         G+++ +   +     P 
Sbjct: 1   MKFIKWLLALVVTLILLVTVYLTVFFDPNDFKAEIVDAVKKQTGRELVITDDLSWTFFPV 60

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    + +   E  +     ++         +PL S +I + ++ +D   +N      
Sbjct: 61  IGINLGGVSLSNPEGFTPKAMLEVNKAVAEVALMPLFSQQIEIAELSLDGATINLVTRKN 120

Query: 120 GVSNW--------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
           G S++                  S+   ++++ +  I +   +I +ID+   Q    +  
Sbjct: 121 GTSSFDGLSGDNSKKAATPAAETSSNAKLNDINIGGISITNTQINMIDEAKKQTQVFTLK 180

Query: 166 NLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221
           +  +    L   +P++ +        +V +EG G     R   ++  N    +  +  + 
Sbjct: 181 SFTLGEFALEQFAPIAFEFSATMPDMTVSSEGKGELKLSRDFTQLVVNGLKIDTVVEGE- 239

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLL-NLELSAKKSRLSGNFKIS 279
            +        I L   +  +++Q        + A   +     +  + K  +++ +F++ 
Sbjct: 240 SIPNKKLETSISLATQIALDKQQLSIDIAQLTAASITAAGKVGVNYATKIPQINADFQVG 299

Query: 280 DGNVR--ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320
           D ++   + + +  ++   +        +        L+    
Sbjct: 300 DIDLDTLLPKTETAAVTEQAPAASTQAVEPDLSALKQLDVKLK 342


>gi|153000533|ref|YP_001366214.1| AsmA family protein [Shewanella baltica OS185]
 gi|151365151|gb|ABS08151.1| AsmA family protein [Shewanella baltica OS185]
          Length = 607

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 111/306 (36%), Gaps = 23/306 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +   L  + +++L+    + +F D  DF+ +         G+++ +   +     P 
Sbjct: 1   MKFIKWLLALVVTLILLVTVYLTVFFDPNDFKPEIVDAVKKQTGRELVIADDLSWTFFPV 60

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    + +   E  +     ++         +PL S +I + ++ +D   +N      
Sbjct: 61  IGINLGGVSLSNPEGFTPKAMLEVNKAVAEVALMPLFSQQIEIAELSLDGATINLVTRKN 120

Query: 120 GVSNW--------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
           G +++                  S+   ++++ +  I +   +I +ID+   Q    +  
Sbjct: 121 GTNSFDGLSGDNSKKAATPAAETSSNAKLNDINIGGISITNTQINMIDEAKKQTQVFTLK 180

Query: 166 NLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221
           +  +    L   +P++ +        +V +EG G     R   ++  N    +  +  + 
Sbjct: 181 SFTLGEFALEQFAPIAFEFSATMPDMTVSSEGKGELKLSRDLTQLVVNGLKIDTVVEGE- 239

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLL-NLELSAKKSRLSGNFKIS 279
            +        I L   +  +++Q        + A   +     +  + K  +++ +F++ 
Sbjct: 240 SIPNKKLETSISLATQIALDKQQLSVDIAQLNAASITAAGKVGVNYATKIPQINADFQVG 299

Query: 280 DGNVRI 285
           D ++  
Sbjct: 300 DIDLDT 305


>gi|300722473|ref|YP_003711761.1| suppressor of ompF assembly mutants [Xenorhabdus nematophila ATCC
           19061]
 gi|297628978|emb|CBJ89563.1| suppressor of ompF assembly mutants [Xenorhabdus nematophila ATCC
           19061]
          Length = 622

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 43/371 (11%), Positives = 113/371 (30%), Gaps = 52/371 (14%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS 78
           G   + + ++  DFR+   +Q     G  + ++  ++ H+ P  S+    I +  +    
Sbjct: 18  GLMALVMLVNPNDFRDYIVKQVQKKSGYHLVLQDELRWHVWPKLSILTGQISLTAQNAKQ 77

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----------RK 128
                E + +  E  PLLS ++ V ++ +    L     S+                   
Sbjct: 78  PAVVAENMRLDVELFPLLSHQLSVKEVMLKGAVLRVTPDSQPQKRLEAPVAPESGFHYPM 137

Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188
              +    + + KI V    + I    +   +   D+NL ++                  
Sbjct: 138 VASNQPWKLDISKIRVVD-SLLIWQTSNHSQFNARDINLLLN------------------ 178

Query: 189 VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248
                  + D+         N   +  A  L   +    YP  I    +          S
Sbjct: 179 -----RSDKDHINLEVSSKINRNQQELAFELNASMDTSDYPQQISADID----------S 223

Query: 249 GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308
             + + G     + ++ +         ++    +V + +  L     N  +D        
Sbjct: 224 FEYLLQGVGLPSVGIKGAGSAI---AKYQARSESVALQKIALTV---NEESDLKGDITAV 277

Query: 309 QDEENLLNFSENGAESMHD--LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHD 366
             +    + +   ++   D  L   +  +   +   +  ++ + ++  +       +++D
Sbjct: 278 LKDRPQYSINLISSKLNLDNLLGWDNLPKNSPQAKHDYRIENNSLKPVIATSVSPLSNYD 337

Query: 367 KENQENFSGDK 377
               + F+ + 
Sbjct: 338 LAFLQGFNANL 348


>gi|259910216|ref|YP_002650572.1| AsmA family protein [Erwinia pyrifoliae Ep1/96]
 gi|224965838|emb|CAX57371.1| AsmA family protein [Erwinia pyrifoliae Ep1/96]
 gi|283480326|emb|CAY76242.1| Uncharacterized protein yhjG [Erwinia pyrifoliae DSM 12163]
          Length = 684

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 45/357 (12%), Positives = 100/357 (28%), Gaps = 40/357 (11%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQKE 75
           DW   +    R+ +  + +  A++G + +              +P+P V+ +DI +    
Sbjct: 30  DWNRLKPIINRKVSAEINRPFAIRGDLGVSWQRNRNEPGWHGWVPWPQVYAQDIMLGNPP 89

Query: 76  --DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ------- 126
                    ++ +      L LLS +I +  + + QP      ++ G +NW         
Sbjct: 90  YVPDVTMVHLQRVEATLSPLALLSQQIYLPRIALQQPQAKLVQTADGKNNWTFNLAGSGN 149

Query: 127 -RKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLNLQISARFLNIISPLSID 183
            + S      +  L+ I    G +   D   ++D    +  L   +    L         
Sbjct: 150 QQASKEPSAWSFRLDSIAFDRGTVSYRDAINKADVQVVVDPLGKAVPYAQLAGGDDKQKG 209

Query: 184 SIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
           +         +G ++N++   +         +++     +          + + G +   
Sbjct: 210 AADFVFGWRASGTYNNEKLRGEGKIGGMLSLRSQNTPFPVAADVHNGTTRVRIAGTVQDP 269

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQ 291
                       +GD    L                   L+  F+  DG V R   +   
Sbjct: 270 MNLGGVDLRLRFSGDTLANLYGLTGVLLPETPPYETDGHLTARFQQPDGAVFRYQNFNGH 329

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDDLK 347
               +                  L  +    +    DL      +  +   K    K
Sbjct: 330 IGDSDIRGSL---AYRQGKPRPELTGTLESLQLRVADLGPLIGVDSGKDSAKTARAK 383


>gi|117923475|ref|YP_864092.1| AsmA family protein [Magnetococcus sp. MC-1]
 gi|117607231|gb|ABK42686.1| AsmA family protein [Magnetococcus sp. MC-1]
          Length = 794

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 60/381 (15%), Positives = 130/381 (34%), Gaps = 36/381 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++LI L  L  +V+V    +PLF+D  + +     +     G+ +++ G + + + P+
Sbjct: 1   MKKLLIALISLIVLVIVVLVAIPLFVDPNEHKPLIAEKVHEATGRTLSLNGNLHLSLFPW 60

Query: 62  PSVFFKDIRIDQKED---GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
             V  +   +    D   G    K+  + +R + +PLLS ++ V  + ID    +     
Sbjct: 61  AGVTIEAAELGNPADIGVGQAMVKLNKVDVRVKLMPLLSKQVVVDRIIIDGLEAHLIRDK 120

Query: 119 KGVSNWFQRK-----------------------STMDMIHNVILEKIHVKGGRIKIIDQE 155
            G  NW                           +    +  + L  + +   ++   D++
Sbjct: 121 HGKDNWSDLSGGGKGAQTDTAAPQAGGTNQEKAAGSSPLAGLSLGGVEISNAKVSFRDEQ 180

Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215
           +D V  L+ LNL   A  L     L++D+        G G   +    F       A  +
Sbjct: 181 ADLVASLNPLNLATGAVALGQPVDLTLDAKLAKRSISGKGEALDVGVQFSGQLQPAADMQ 240

Query: 216 AISLKIQLFPLAYPIII----DLFGNLFWNEKQPIYSGVFSVAGDFS---KLLNLELSAK 268
           ++ L      +           +   L  +    +  G   ++ +        + EL   
Sbjct: 241 SLLLNGMKLMIETTAKGLPVTKVQTQLSADVAVDLKGGTVKISRNKLAIEAEGSPELGMD 300

Query: 269 KSR--LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
             R  L+G+  ++   + I    L   +  +         V       L  +        
Sbjct: 301 TVRAALTGSIGVNLEPLTIEISGLDLTVQGNGGKLPG-GSVDLHMAADLLANMAAGTVGV 359

Query: 327 DLNETDFFEEEEKKNKNDDLK 347
                + FE++ K + + D+ 
Sbjct: 360 KNLRLEGFEQQLKASGDVDVS 380


>gi|171319684|ref|ZP_02908775.1| AsmA family protein [Burkholderia ambifaria MEX-5]
 gi|171095064|gb|EDT40075.1| AsmA family protein [Burkholderia ambifaria MEX-5]
          Length = 723

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 66/209 (31%), Gaps = 16/209 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           + +    +  + ++++          DW   +       +  +G+  A+ G +++     
Sbjct: 7   IGKSAAWIVGIVALIIAATGVFIFTFDWNHAKPWVNEHVSTALGRSFAINGDLRVDWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      + +   +   G     ++        LPL + +I +  + +
Sbjct: 67  QGETGWRAWVPWPRFSATQLEMGNPDWAKGPKFVTLDAAHFDLAILPLFTHQIVIPSIDV 126

Query: 108 DQPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P ++    + G + W    ++S       + L+      G I   D  +     ++  
Sbjct: 127 VNPAVDLERLADGRNTWTFEFKQSGQPSPWKLRLDSFAFAKGTIVYRDAITKADLTIAVD 186

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194
            L       +++      S   S    G 
Sbjct: 187 TLGHPIPIGDVLKEQEQTSRAASAQHVGK 215


>gi|254189021|ref|ZP_04895532.1| AsmA family protein [Burkholderia pseudomallei Pasteur 52237]
 gi|157936700|gb|EDO92370.1| AsmA family protein [Burkholderia pseudomallei Pasteur 52237]
          Length = 830

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  +F+V+           DW   +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      I I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
             P L+    + G +NW              V L       G +   D  +     +
Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183


>gi|167918706|ref|ZP_02505797.1| AsmA family protein [Burkholderia pseudomallei BCC215]
          Length = 830

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  +F+V+           DW   +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      I I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
             P L+    + G +NW              V L       G +   D  +     +
Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183


>gi|53723550|ref|YP_102969.1| AsmA family protein [Burkholderia mallei ATCC 23344]
 gi|67641313|ref|ZP_00440094.1| AsmA family protein [Burkholderia mallei GB8 horse 4]
 gi|76809968|ref|YP_333714.1| AsmA family protein [Burkholderia pseudomallei 1710b]
 gi|121601111|ref|YP_993115.1| AsmA family protein [Burkholderia mallei SAVP1]
 gi|124385936|ref|YP_001026108.1| AsmA family protein [Burkholderia mallei NCTC 10229]
 gi|126442300|ref|YP_001059186.1| AsmA family protein [Burkholderia pseudomallei 668]
 gi|126450741|ref|YP_001080621.1| AsmA family protein [Burkholderia mallei NCTC 10247]
 gi|167002503|ref|ZP_02268293.1| AsmA family protein [Burkholderia mallei PRL-20]
 gi|254177677|ref|ZP_04884332.1| AsmA family protein [Burkholderia mallei ATCC 10399]
 gi|254199914|ref|ZP_04906280.1| AsmA family protein [Burkholderia mallei FMH]
 gi|254206246|ref|ZP_04912598.1| AsmA family protein [Burkholderia mallei JHU]
 gi|254258265|ref|ZP_04949319.1| AsmA family protein [Burkholderia pseudomallei 1710a]
 gi|52426973|gb|AAU47566.1| AsmA family protein [Burkholderia mallei ATCC 23344]
 gi|76579421|gb|ABA48896.1| AsmA family protein [Burkholderia pseudomallei 1710b]
 gi|121229921|gb|ABM52439.1| AsmA family protein [Burkholderia mallei SAVP1]
 gi|124293956|gb|ABN03225.1| AsmA family protein [Burkholderia mallei NCTC 10229]
 gi|126221793|gb|ABN85299.1| AsmA family protein [Burkholderia pseudomallei 668]
 gi|126243611|gb|ABO06704.1| AsmA family protein [Burkholderia mallei NCTC 10247]
 gi|147749510|gb|EDK56584.1| AsmA family protein [Burkholderia mallei FMH]
 gi|147753689|gb|EDK60754.1| AsmA family protein [Burkholderia mallei JHU]
 gi|160698716|gb|EDP88686.1| AsmA family protein [Burkholderia mallei ATCC 10399]
 gi|238522224|gb|EEP85670.1| AsmA family protein [Burkholderia mallei GB8 horse 4]
 gi|243061838|gb|EES44024.1| AsmA family protein [Burkholderia mallei PRL-20]
 gi|254216954|gb|EET06338.1| AsmA family protein [Burkholderia pseudomallei 1710a]
          Length = 830

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  +F+V+           DW   +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      I I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
             P L+    + G +NW              V L       G +   D  +     +
Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183


>gi|329297874|ref|ZP_08255210.1| AsmA family protein [Plautia stali symbiont]
          Length = 656

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 46/384 (11%), Positives = 107/384 (27%), Gaps = 38/384 (9%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    +  +  + +  A++G + +              + +P V   D+ +D 
Sbjct: 28  TFDWNRRKPTINQNVSAELNRPFAIRGDLGVAWVRNREEPGWRSWVLWPQVHADDVMLDN 87

Query: 74  KE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
                      ++ +      L LL  EI +  + + QP      ++   +NW       
Sbjct: 88  PPSVPEVTMVHLQRVEATLAPLALLHKEIYLPWIKMQQPDARLVQTADKKNNWTFNLASS 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    G+++  D  +     +    L     +  +       
Sbjct: 148 ENSDPNAPPSAWSFRLDNILFDQGQLRYRDAINKADVTVKINPLGKPVPYAQVAGGNDQQ 207

Query: 184 SIKGSVI--AEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
              G  +   + +G ++N++             +++     +QL        + + G L 
Sbjct: 208 KGAGDFVFGWQASGTYNNQKLDGDGKIGGMLSLRSRTTQFPLQLDVRNGTTRVRVDGTLQ 267

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP---- 295
                         +GD    L          L    +       I+R+  +        
Sbjct: 268 DPLNLGGLDVRLRFSGDTLANLYGLTGVTGVLLPDTPQYETDGHLIARFNEEKGPLFRYE 327

Query: 296 -----NSSTDEDNKTKVSQD-EENLLNFSENGAES-MHDLNETDFFEEEEKKNKNDDLKK 348
                   +D        Q       +      +  M DL          K ++     K
Sbjct: 328 KFNGHIGDSDIHGSLSYRQGKPRPTRSGELTSNQLRMADLGPLIGVN-SGKSSEKTAQAK 386

Query: 349 DDIQYSVNKKEEKDNSHDKENQEN 372
                +  +  ++   HDK + +N
Sbjct: 387 AQRGEASTQPADRVLPHDKFDTKN 410


>gi|33603127|ref|NP_890687.1| hypothetical protein BB4152 [Bordetella bronchiseptica RB50]
 gi|33568758|emb|CAE34516.1| exported protein, conserved [Bordetella bronchiseptica RB50]
          Length = 702

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 44/394 (11%), Positives = 98/394 (24%), Gaps = 55/394 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQ 73
            +DW   +     +A+  +G+  A++G + +              +P+P     D+ I  
Sbjct: 28  TLDWNRLKPTINERASAALGRPFAIQGDLSVQWAREPGQGGWRGWVPWPHFVVHDVAIAN 87

Query: 74  KEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--RKS 129
                      +     R   LPLL   + +  + +     +    + GV+NW      +
Sbjct: 88  AVWARDSNLLTLRRGEFRLAPLPLLRQRVVIRRIQLSGLRADLQRRADGVANWEFTMPDT 147

Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL-----------------------SDLN 166
                  V ++ I    G I+  D  +     +                       +D  
Sbjct: 148 GEPSPWKVDIDAIGFDQGAIRYADAIAQADLDVLVDPLGKPVPFAELAGAPAGDGAADQA 207

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLF 224
              +       +         +   +  G +                 ++      +Q  
Sbjct: 208 AGGADSGKPADAAALAAPPDYAFGWQVNGRYKELPLEGTGKVGGMLALRDARQPFPVQAE 267

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGN 275
                  +++ G L              +AG     L                  RL   
Sbjct: 268 VAIGSTKVEVVGTLTDPMSLGALDLRLKLAGASMANLYPLTGVTLPDTPPYSTDGRLVAR 327

Query: 276 FK-ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES-MHDLNETDF 333
            +           +  +    +        T   Q     L+   +     M DL     
Sbjct: 328 LQDPQGARFEYRDFNGKVGASD---LHGGITFALQQPRPRLSGKLSSRLLRMADLGPLIG 384

Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
            +    K+   + +K   Q +      ++   D+
Sbjct: 385 VQSGGAKSVKAEGEKAVAQPADKVLPVQEFRTDR 418


>gi|237812510|ref|YP_002896961.1| AsmA family protein [Burkholderia pseudomallei MSHR346]
 gi|237506754|gb|ACQ99072.1| AsmA family protein [Burkholderia pseudomallei MSHR346]
          Length = 830

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  +F+V+           DW   +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      I I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
             P L+    + G +NW              V L       G +   D  +     +
Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183


>gi|167902436|ref|ZP_02489641.1| AsmA family protein [Burkholderia pseudomallei NCTC 13177]
 gi|217421613|ref|ZP_03453117.1| AsmA family protein [Burkholderia pseudomallei 576]
 gi|217395355|gb|EEC35373.1| AsmA family protein [Burkholderia pseudomallei 576]
          Length = 824

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  +F+V+           DW   +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      I I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
             P L+    + G +NW              V L       G +   D  +     +
Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183


>gi|254198412|ref|ZP_04904834.1| AsmA family protein [Burkholderia pseudomallei S13]
 gi|169655153|gb|EDS87846.1| AsmA family protein [Burkholderia pseudomallei S13]
          Length = 830

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  +F+V+           DW   +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      I I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
             P L+    + G +NW              V L       G +   D  +     +
Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183


>gi|119775022|ref|YP_927762.1| AsmA protein [Shewanella amazonensis SB2B]
 gi|119767522|gb|ABM00093.1| AsmA protein [Shewanella amazonensis SB2B]
          Length = 604

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 27/266 (10%), Positives = 80/266 (30%), Gaps = 15/266 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +      + ++ ++    + L  D  DF+           G+ + ++  +     P 
Sbjct: 1   MKLIKWIFAGIAAIAVLVVLYITLIFDPNDFKPMLVDAVKEQTGRDLVIEEPLSWQFFPS 60

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    + +   E         ++ +    + LPLLS ++++  + +D   L    + +
Sbjct: 61  IGIRLAGVSLSNPEGFKEAHMMAVKEVVAEVKLLPLLSRDVQIDQLRLDGAKLTLVTTKQ 120

Query: 120 GVSNWFQRKSTMDMIHN------------VILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
           G S+                         + +  I++    I +ID+ +      +  +L
Sbjct: 121 GKSSLDGLTGNTTSADKPADVKQGPGLNAISIGGINISDTSITLIDEAAGSSQTFTLSSL 180

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
            +        +PL+          +  G  +   +  +           + +  Q   L 
Sbjct: 181 TLGEFTPGKAAPLAFAFGADLPDMKVKGEGEATLTVSEAFNALSLVGLNLEVNAQGNSLP 240

Query: 228 -YPIIIDLFGNLFWNEKQPIYSGVFS 252
              + ++  G      +         
Sbjct: 241 KGAVTVEFAGGADVALEAKTAKLTVD 266


>gi|53719181|ref|YP_108167.1| hypothetical protein BPSL1547 [Burkholderia pseudomallei K96243]
 gi|126454124|ref|YP_001066452.1| AsmA family protein [Burkholderia pseudomallei 1106a]
 gi|242316223|ref|ZP_04815239.1| AsmA family protein [Burkholderia pseudomallei 1106b]
 gi|254179590|ref|ZP_04886189.1| AsmA family protein [Burkholderia pseudomallei 1655]
 gi|52209595|emb|CAH35548.1| putative membrane protein [Burkholderia pseudomallei K96243]
 gi|126227766|gb|ABN91306.1| AsmA family protein [Burkholderia pseudomallei 1106a]
 gi|184210130|gb|EDU07173.1| AsmA family protein [Burkholderia pseudomallei 1655]
 gi|242139462|gb|EES25864.1| AsmA family protein [Burkholderia pseudomallei 1106b]
          Length = 824

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  +F+V+           DW   +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      I I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
             P L+    + G +NW              V L       G +   D  +     +
Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183


>gi|24374109|ref|NP_718152.1| asmA protein [Shewanella oneidensis MR-1]
 gi|24348599|gb|AAN55596.1|AE015698_4 asmA protein [Shewanella oneidensis MR-1]
          Length = 606

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/345 (12%), Positives = 119/345 (34%), Gaps = 21/345 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +  +   L  L + V+     + +F D  DF+ +         G+++ +   +     P 
Sbjct: 1   MTFIKWLLVILVTFVVAVTLYLTVFFDPNDFKPEVVNAVKKQTGRELVITEDLSWTFFPT 60

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    + +   E  +     ++       E +PL S +I +  + +D   +N      
Sbjct: 61  VGINLGGVSLSNPEGFTPKSMLEVHKAVAEVELMPLFSKQIEIVQLSLDGAKINLVTRKN 120

Query: 120 GVSNWF--------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
           G S++               +   +   + ++ +  + +   +I +ID+   Q   ++  
Sbjct: 121 GSSSFDGLTGSTADKSSTPSEPSLSQAKLASIDVGGVSITNTQINLIDEAKGQTQTVTLK 180

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
              + A  L+  +P++ +          +   + +            +   I+ +++   
Sbjct: 181 QFTLGAFSLDKFAPIAYELTASLPDMTLSSKGEGQIKLSHDFNQLVIEKLDIATQVEGDA 240

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK-KSRLSGNFKISDGNVR 284
           + +     L   +  N +  +     S   +   + ++  + K     +G     + N++
Sbjct: 241 IPHK---KLTAEVSVNSQIALDKKQLSADINKFAVEDISATGKLAVHYAGKVPQINANLQ 297

Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE-NGAESMHDL 328
           +    L ++LP S T E      +  +    + +  NG ++   L
Sbjct: 298 LGDIDLDALLPKSDTAEKQPIASTSSQAIEPDLTALNGLDARLTL 342


>gi|226197502|ref|ZP_03793079.1| AsmA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|225930881|gb|EEH26891.1| AsmA family protein [Burkholderia pseudomallei Pakistan 9]
          Length = 824

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  +F+V+           DW   +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      I I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
             P L+    + G +NW              V L       G +   D  +     +
Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183


>gi|146279133|ref|YP_001169292.1| AsmA family protein [Rhodobacter sphaeroides ATCC 17025]
 gi|145557374|gb|ABP71987.1| AsmA family protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 675

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 89/289 (30%), Gaps = 31/289 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R ++  +  LF + +       + +      E   RQ     G+ + + G ++  + P 
Sbjct: 19  MRWLIRLVAVLFGL-VALFLVALVLVPRDRLAELAVRQFEAATGRAMTISGEVRPSVWPK 77

Query: 62  PSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V    + I       G    +   L +  + L L+ G  R+  + +D+P +     ++
Sbjct: 78  LGVRTGPVTIANAPWAAGEPLLEARALEIGLDTLALMGGSWRISRVALDEPVIRLERDAE 137

Query: 120 GVSNWF----------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
           G +NW                    +    +    L++  V GGR+  ID  + +   +S
Sbjct: 138 GRANWDLSRPAAADPAPEADPSPATAAGSAVSPFTLDEGIVTGGRVLWIDHGTGRRGDIS 197

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
            +  +++       + L++            G  +   SA                 ++L
Sbjct: 198 GVQARVTLPESGGPADLTLSGQANGRGFAVEGRLEEAGSALAGRVAP----------LRL 247

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
                   I   G        P+  G    A      L       +  L
Sbjct: 248 SLATGSARITFEGEAG--SAPPMADGRIDAALGDLGDLAALFGRPRPEL 294


>gi|134277286|ref|ZP_01764001.1| AsmA family protein [Burkholderia pseudomallei 305]
 gi|134250936|gb|EBA51015.1| AsmA family protein [Burkholderia pseudomallei 305]
          Length = 831

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 16/177 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           L +    +  +F+V+           DW   +     QA+  +G+   ++G IK+     
Sbjct: 7   LGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      I I           + ++        LPLL+ E+ +  + +
Sbjct: 67  DGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIEL 126

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTM--DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
             P L+    + G +NW              V L       G +   D  +     +
Sbjct: 127 VNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKADLSV 183


>gi|91783495|ref|YP_558701.1| putative transmembrane protein, AsmA-like [Burkholderia xenovorans
           LB400]
 gi|91687449|gb|ABE30649.1| Putative transmembrane protein, AsmA-like protein [Burkholderia
           xenovorans LB400]
          Length = 839

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 76/210 (36%), Gaps = 16/210 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           + +++  L  +  +++V      L  DW   R     + T  +G+  A+ G +K+     
Sbjct: 11  IGKIIAWLVAIIVILIVALTIFILTFDWNRARPYINDKVTQAIGRPFAINGDLKVGWRHP 70

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P     +I +   +       + ++ +  + + LPLL+ +I +  + +
Sbjct: 71  VGETGWRGWVPWPRFSAANITVGNPDWTKQPQFATLDEIDFQVKVLPLLTHDIVIPAINL 130

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P ++      G +NW  + ++        + L  I    G I + DQ+      +   
Sbjct: 131 VNPSVDLERLLDGRNNWTFKLASSGGPSEWKLDLHDIAFAKGNIALSDQQKKVDLQMVVD 190

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTG 195
            L         +    + S   S  A G  
Sbjct: 191 TLGQPIPIGEAMKQQEVASRSASAEAIGKA 220


>gi|45441240|ref|NP_992779.1| putative assembly protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|45436100|gb|AAS61656.1| putative exported protein [Yersinia pestis biovar Microtus str.
           91001]
          Length = 584

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 32/358 (8%), Positives = 97/358 (27%), Gaps = 58/358 (16%)

Query: 36  FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95
             +Q     G  + ++G ++ H+ P  S+    + +            E + +  +  PL
Sbjct: 1   MVKQVEKKSGYHLQLEGDLRWHVWPQLSIIAGRMALTAPGALEPVVSAENMRLDVKLWPL 60

Query: 96  LSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR----------KSTMDMIHNVILEKIHVK 145
           LS ++ V  + +    +     S+                    + +    + + ++ + 
Sbjct: 61  LSHQLDVKQVMLKGAVIRLTPDSEAQQQIDAPVAPIAPAGSTPVSDNRGWTLDINRLQIA 120

Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK 205
              +     ++DQ   + D+NL++                               +    
Sbjct: 121 DSLLIWQRSDNDQ-INVRDINLELKQGGQR-----------------------QVQVTLA 156

Query: 206 ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
              N   ++   S+ I      YP                I    + + G       +  
Sbjct: 157 SRVNRNQRDLTFSMVIDADMHQYPRQFSAN----------ISQFTYKLEGADIPAGGISG 206

Query: 266 SAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
                 L  +++     + +++    +    ++       K +  +      +       
Sbjct: 207 GG---ALEASYQSDIQQLLLNQLNFTA----NNNQLAGSVKATFGDVPDYVVNLTSDNLN 259

Query: 326 HDLNETDFFEEEEKKNKNDDLKKDDIQYSV---NKKEEKDNSHDKENQENFSGDKMIL 380
            D      F  + K +     +      +      + + D   + +   +F+    ++
Sbjct: 260 LD----AIFGWQPKSSTASTDEAKQPVTTAPVIAIQIDDDVGQNLQALRDFTAQTTVV 313


>gi|209695665|ref|YP_002263594.1| putative outer membrane assembly protein [Aliivibrio salmonicida
           LFI1238]
 gi|208009617|emb|CAQ79913.1| putative outer membrane assembly protein [Aliivibrio salmonicida
           LFI1238]
          Length = 719

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 51/390 (13%), Positives = 120/390 (30%), Gaps = 69/390 (17%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           +++++ +   F  +++    + L ++   F+   + Q     G+++ + G I     P  
Sbjct: 6   KKIVLLISIPFIAIVIALLVLVLVVNPNQFKPLIKEQVEQQTGRQLTMDGDISWRFFPSI 65

Query: 63  SVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
                ++ +      +     K +  ++    LPL   EI +  + +D      +    G
Sbjct: 66  GFSIGNMALSNPTGFATANLVKFDNANIDINVLPLFDHEINIGLITLDGAAFTLHTLKSG 125

Query: 121 VSNW--------------------------------FQRKSTMDMIHNVILEKIHVKGGR 148
           V+N                                     +       V LE I +    
Sbjct: 126 VTNLDGIGPKEEISVAENKTEIKNEDVTTSDNLNAEAATTAPEINSWTVSLEGIALTNAS 185

Query: 149 IKIIDQESDQVYFLSDLNLQISARFLNI----ISPLSIDSIKGSVIAEGTGNFDNKRSAF 204
             I D ++     LS++N+++S             L  D  +  +  +G  + +  ++  
Sbjct: 186 ALIQDDKAGTKTQLSNMNIKLSQFSPGEWTHLTFDLKADLGQQKIALKGETDLNIAKTLD 245

Query: 205 KIT----------ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254
             +          A+   K   I+L+I  F       ++L      N+        F + 
Sbjct: 246 TASLKETELVVSYADKTNKFDGITLRIDKFNFDEWSTLELVAAGKANDMTVDSKSTFELN 305

Query: 255 ----------GDFSKLLNLELSAKKSR-------LSGNFKISDGNVRISRYKLQSILPNS 297
                       F    N+   A  ++        + +F ++   ++++   L ++    
Sbjct: 306 VPKALDIIKIRKFISTNNVIGDALPNKDVTAIIGFNSSFDVTKSLLQVTDLTLSAV---- 361

Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHD 327
            T  D K  V       + F  +      D
Sbjct: 362 DTQFDGKASVELKGIPKVRFELHSPSIDVD 391


>gi|204928682|ref|ZP_03219881.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|204322115|gb|EDZ07313.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|322613997|gb|EFY10933.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322617889|gb|EFY14782.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322625496|gb|EFY22322.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322629961|gb|EFY26734.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322632150|gb|EFY28901.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322636500|gb|EFY33207.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322643134|gb|EFY39708.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322644645|gb|EFY41181.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322651331|gb|EFY47715.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322652753|gb|EFY49092.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322659054|gb|EFY55306.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322663244|gb|EFY59448.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322668730|gb|EFY64883.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322674466|gb|EFY70559.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322678327|gb|EFY74388.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322682415|gb|EFY78436.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322684129|gb|EFY80135.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|323192315|gb|EFZ77547.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323196257|gb|EFZ81409.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323201405|gb|EFZ86471.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323206485|gb|EFZ91446.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323212077|gb|EFZ96904.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323216982|gb|EGA01705.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323220347|gb|EGA04801.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323228324|gb|EGA12455.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323233409|gb|EGA17502.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323237130|gb|EGA21197.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323243655|gb|EGA27671.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323246101|gb|EGA30088.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323250881|gb|EGA34759.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323257626|gb|EGA41312.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323261833|gb|EGA45400.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323266110|gb|EGA49601.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323268654|gb|EGA52121.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 686

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/393 (11%), Positives = 108/393 (27%), Gaps = 52/393 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +D+ +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    GRI I D+ S     +  ++        + ++     
Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-IDPLGKPLPFSEVTGTKGK 206

Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + K S        +  G ++ +              +++++   +Q    +    +   G
Sbjct: 207 ADKSSVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESMPFPVQADFRSGNTRVAFSG 266

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286
            +    K          +GD    L                  RL         +V    
Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326

Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344
            +  +    +           +       L       +    DL      +      K+ 
Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
           +  K   Q    K  +  +       + F  DK
Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409


>gi|160875170|ref|YP_001554486.1| AsmA family protein [Shewanella baltica OS195]
 gi|160860692|gb|ABX49226.1| AsmA family protein [Shewanella baltica OS195]
 gi|315267364|gb|ADT94217.1| AsmA family protein [Shewanella baltica OS678]
          Length = 607

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 112/306 (36%), Gaps = 23/306 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +   L  + +++L+    + +F D  DF+ +         G+++ +   +     P 
Sbjct: 1   MKLIKWLLALVVTLILLVTVYLTVFFDPNDFKPEIVDAVKKQTGRELVIADDLSWTFFPV 60

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    + +   E  +     ++         +PL S +I + ++ +D   +N      
Sbjct: 61  IGINLGGVSLSNPEGFTPKAMLEVNKAVAEVALMPLFSQQIEIAELSLDGATINLVTRKN 120

Query: 120 GVSNW--------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
           G S++                  S+   ++++ +  I +   +I +ID+   Q    +  
Sbjct: 121 GTSSFDGLSGDNSKKAATPAAETSSNAKLNDINIGGISITNTQINMIDEAKKQTQVFTLK 180

Query: 166 NLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221
           +  +    L   +P++ +        +V +EG G     R   ++  N    +  +  + 
Sbjct: 181 SFTLGEFALEQFAPIAFEFSATMPDMTVSSEGKGELKLSRDFTQLVVNGLKIDTVVEGE- 239

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLL-NLELSAKKSRLSGNFKIS 279
            +        I+L   +  +++Q        + A   +     +  + K  +++ +F++ 
Sbjct: 240 SIPNKKLETSINLATQIALDKQQLSVDIAQLTAASITAAGKVGVNYATKIPQINADFQVG 299

Query: 280 DGNVRI 285
           D ++  
Sbjct: 300 DIDLDT 305


>gi|145300461|ref|YP_001143302.1| asmA protein [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142853233|gb|ABO91554.1| asmA protein [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 719

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/386 (11%), Positives = 113/386 (29%), Gaps = 64/386 (16%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++++  L  L    LV    +   ID  +F+     Q     G+++ ++G I     P 
Sbjct: 1   MKKIIYILLGLALAALVIITALVKLIDPNEFKPQLVEQVRKSTGRELVMEGDIGWRFWPS 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +  + + +            + E        LPLLS  + + ++ +   HL     + 
Sbjct: 61  LGLSLERVALRNPAGFAEPDLVRFERGDASVAVLPLLSHRLDIGEVTLTGAHLFIQTRAD 120

Query: 120 GVSNW--------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159
           G SN                      Q  ++      + L+ + ++     + D  +  +
Sbjct: 121 GSSNLNDLVKTPEAAKDSEPAPGGQSQPPASNGQTWQITLQGVVLEQASALVQDDRNGTL 180

Query: 160 YFLS----------------------------DLNLQISARFLNIISPLSIDSIKGSVIA 191
             L                              L   I       ++  ++ S   ++  
Sbjct: 181 SRLDQLDLALALGQLTPGQWVPVTLAAKGAQGKLAFDIKGEGEVKLAQDALASELKNLSL 240

Query: 192 EGTGNFDNKRS-AFKITANFPAKNKAISLKIQLFPLA-------YPIIIDLFGNLFWNEK 243
            G+ +   +R  +F + A+  A  +  SL + L               ++       ++ 
Sbjct: 241 SGSLSQPQQRLDSFSVKADRLALGEWSSLTLNLQGAQLEGDQPTLAGSLEGTLKARVDKG 300

Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRISRYKLQSILPNSSTDE 301
             +     +      +   L       +L+G    ++    + +S+  + +         
Sbjct: 301 LQLVEVSDAKLAANLQGKALPRPQMNLKLAGFARAELDQQKITLSKLVMSA----DDALL 356

Query: 302 DNKTKVSQDEENLLNFSENGAESMHD 327
             +  V       + F   G +   D
Sbjct: 357 RGEGAVRLGAVPKIEFDLKGDKLDLD 382


>gi|145600605|ref|YP_001164681.1| hypothetical protein YPDSF_3353 [Yersinia pestis Pestoides F]
 gi|162418977|ref|YP_001608360.1| hypothetical protein YpAngola_A4073 [Yersinia pestis Angola]
 gi|145212301|gb|ABP41708.1| hypothetical protein YPDSF_3353 [Yersinia pestis Pestoides F]
 gi|162351792|gb|ABX85740.1| AsmA family protein [Yersinia pestis Angola]
          Length = 729

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/410 (12%), Positives = 108/410 (26%), Gaps = 91/410 (22%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           +VL+G      + LV         DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KVLVGASGFILLSLVAVVIFVSSFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGE 65

Query: 58  ------ILPFPSVFFKDIRIDQKE-----------------------DGSFESKIEGLSM 88
                  +P+P +  +D+ +                                  ++ +  
Sbjct: 66  GPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSAQGTPLSDAFPTGEMVTLKRIDA 125

Query: 89  RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVK 145
               L LLS E+R+  +++ QP ++    + G +NW       ST     +V +  I   
Sbjct: 126 SLAPLSLLSKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSASWSVDIGDIIFD 185

Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI--------------- 190
            G I + D    Q   L+ ++    A     ++ +   +   SV                
Sbjct: 186 RGEITLKDAIL-QADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSVNTTTPVNTTT 244

Query: 191 ----------------------AEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPL 226
                                  +  G +  +  A            +  +   +Q    
Sbjct: 245 ATATTNPVTETVKSTTPDYLFGWKVDGQYQGQPLAGSGKIGGMISMNDANVPFPLQADMR 304

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFK 277
               ++ + G L              ++G     L   L               LS   K
Sbjct: 305 YGSTLVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLSARLK 364

Query: 278 ISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
            + G V     +  +    +   D              L    +  +   
Sbjct: 365 QAGGAVYHYENFNGKIGDSDIHGDLT---YTDSQPRPKLAGQVDSEKLRF 411


>gi|170022365|ref|YP_001718870.1| AsmA family protein [Yersinia pseudotuberculosis YPIII]
 gi|169748899|gb|ACA66417.1| AsmA family protein [Yersinia pseudotuberculosis YPIII]
          Length = 739

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/420 (11%), Positives = 108/420 (25%), Gaps = 101/420 (24%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           +VL+G+     + LV A       DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGE 65

Query: 58  ------ILPFPSVFFKDIRIDQ-------------------------KEDGSFESKIEGL 86
                  +P+P +  +D+ +                                    ++ +
Sbjct: 66  GPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEGEMVTLKRI 125

Query: 87  SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIH 143
                 L LL+ E+R+  +++ QP ++    + G +NW       ST     +V +  I 
Sbjct: 126 DASIAPLSLLNKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSSSWSVDIGDII 185

Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI------------- 190
              G I + D    Q   L+ ++    A     ++ +   +   SV              
Sbjct: 186 FDRGEITLKDAIL-QADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSANTTTSSVT 244

Query: 191 --------------------------------AEGTGNFDNKRSAFKITANFPAK--NKA 216
                                            +  G +  +               +  
Sbjct: 245 TTSVVTTTATATTNPVTEIETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMISMNDAN 304

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR----- 271
           +   +Q         + + G L              ++G     L   L           
Sbjct: 305 VPFPLQADMRYGSTQVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQ 364

Query: 272 ----LSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
               LS   K + G V     +  +    +   D              L    +  +   
Sbjct: 365 TEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLT---YTDSQPRPKLAGQVDSEKLRF 421


>gi|168465103|ref|ZP_02698995.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|195632137|gb|EDX50621.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
          Length = 686

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/341 (10%), Positives = 92/341 (26%), Gaps = 45/341 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +D+ +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    GRI I D+ S     +  ++        + ++     
Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-IDPLGKPLPFSEVTGTKGK 206

Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + K S        +  G ++ +              ++++    +Q    +    +   G
Sbjct: 207 ADKSSVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286
            +    K          +GD    L                  RL         +V    
Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326

Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH 326
            +  +    +           +       L       +   
Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRL 363


>gi|238910362|ref|ZP_04654199.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
          Length = 686

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +D+ +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    GRI I D+ S     +  ++        + ++     
Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-IDPLGKPLPFSEVTGTKGK 206

Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + K +        +  G ++ +              ++++    +Q    +    +   G
Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286
            +    K          +GD    L                  RL         +V    
Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326

Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344
            +  +    +           +       L       +    DL      +      K+ 
Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
           +  K   Q    K  +  +       + F  DK
Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409


>gi|16766896|ref|NP_462511.1| inner membrane protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167990832|ref|ZP_02571931.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|197264416|ref|ZP_03164490.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|16422172|gb|AAL22470.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|197242671|gb|EDY25291.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|205330808|gb|EDZ17572.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|261248763|emb|CBG26613.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267995848|gb|ACY90733.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301160149|emb|CBW19669.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914634|dbj|BAJ38608.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|323131970|gb|ADX19400.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|332990461|gb|AEF09444.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 686

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +D+ +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    GRI I D+ S     +  ++        + ++     
Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-IDPLGKPLPFSEVTGTKGK 206

Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + K +        +  G ++ +              ++++    +Q    +    +   G
Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286
            +    K          +GD    L                  RL         +V    
Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326

Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344
            +  +    +           +       L       +    DL      +      K+ 
Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
           +  K   Q    K  +  +       + F  DK
Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409


>gi|170701297|ref|ZP_02892262.1| AsmA family protein [Burkholderia ambifaria IOP40-10]
 gi|170133783|gb|EDT02146.1| AsmA family protein [Burkholderia ambifaria IOP40-10]
          Length = 765

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 57/177 (32%), Gaps = 16/177 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           + +    +  + ++++          DW   +       +  +G+  A+ G +++     
Sbjct: 7   IGKSAAWIVGIVALIIAATGVFIFTFDWNHAKPWVNEHVSTALGRSFAINGDLRVDWRRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      + I   +   G     ++        LPLL+ +I +  + +
Sbjct: 67  QGETGWRAWVPWPRFSATQLEIGNPDWAKGPKFVTLDAAHFDLAILPLLTHQIVIPSIDV 126

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFL 162
             P ++    + G + W             N+ L+      G I   D  +     +
Sbjct: 127 VNPAVDLERLADGRNTWTFEFKQSGQPSRWNLRLDSFGFAKGTIVYRDAITKADLTI 183


>gi|187923855|ref|YP_001895497.1| AsmA family protein [Burkholderia phytofirmans PsJN]
 gi|187715049|gb|ACD16273.1| AsmA family protein [Burkholderia phytofirmans PsJN]
          Length = 832

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 69/177 (38%), Gaps = 16/177 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           + +++  L  +  +++V      L  DW   R     + T  +G+  A+ G +K+     
Sbjct: 11  IGKIIAWLLAIIVILIVALTIFILTFDWNRARPYINDKVTQAIGRPFAINGDLKVGWRHP 70

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P     +I +   +       + ++ +  + + LPLL+ +I +  + +
Sbjct: 71  VGETGWRGWVPWPRFSAANITVGNPDWTKQPHFATLDEIDFQVKVLPLLAHDIVIPTINL 130

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFL 162
             P ++      G +NW  + ++        + L  I    G I + DQ+      +
Sbjct: 131 VNPSVDLERVLDGRNNWTFKLASSSGPSEWKLDLHDIAFAKGNIALSDQQKKVDLQM 187


>gi|168260655|ref|ZP_02682628.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|205350357|gb|EDZ36988.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
          Length = 686

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +D+ +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    GRI I D+ S     +  ++        + ++     
Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-IDPLGKPLPFSEVTGTKGK 206

Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + K +        +  G ++ +              ++++    +Q    +    +   G
Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286
            +    K          +GD    L                  RL         +V    
Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326

Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344
            +  +    +           +       L       +    DL      +      K+ 
Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
           +  K   Q    K  +  +       + F  DK
Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409


>gi|51598117|ref|YP_072308.1| hypothetical protein YPTB3827 [Yersinia pseudotuberculosis IP
           32953]
 gi|51591399|emb|CAH23065.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
          Length = 737

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/418 (11%), Positives = 108/418 (25%), Gaps = 99/418 (23%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           +VL+G+     + LV A       DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGE 65

Query: 58  ------ILPFPSVFFKDIRIDQKE-----------------------DGSFESKIEGLSM 88
                  +P+P +  +D+ +                                  ++ +  
Sbjct: 66  GPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEMVTLKRIDA 125

Query: 89  RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIHVK 145
               L LL+ E+R+  +++ QP ++    + G +NW       ST     +V +  I   
Sbjct: 126 SLAPLSLLNKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSSSWSVDIGDIIFD 185

Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI--------------- 190
            G I + D    Q   L+ ++    A     ++ +   +   SV                
Sbjct: 186 RGEITLKDAIL-QADLLAVIDPLAKALPFAQVTGVRRGASINSVTSRHSANTTTSSVTTT 244

Query: 191 ------------------------------AEGTGNFDNKRSAFKITANFPAK--NKAIS 218
                                          +  G +  +               +  + 
Sbjct: 245 SVVTTTATATTNPVTEIETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMISMNDANVP 304

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR------- 271
             +Q         + + G L              ++G     L   L             
Sbjct: 305 FPLQADMRYGSTQVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTE 364

Query: 272 --LSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
             LS   K + G V     +  +    +   D              L    +  +   
Sbjct: 365 GHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLT---YTDSQPRPKLAGQVDSEKLRF 419


>gi|91786785|ref|YP_547737.1| AsmA [Polaromonas sp. JS666]
 gi|91696010|gb|ABE42839.1| AsmA [Polaromonas sp. JS666]
          Length = 664

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/319 (11%), Positives = 90/319 (28%), Gaps = 28/319 (8%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ES 81
            LF  W   R    R  +  +G++  +   + +H+    +V    + +   E  +     
Sbjct: 29  ILFFPWDVLRGPINRHVSDQLGRRFEITQHLAVHLGRTVTVKADGVEVANPEWATEPYLL 88

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEK 141
           K        +  PLL G++ +  + +  P     +   G   W   + T D     ++  
Sbjct: 89  KASVAEFDIKLWPLLFGQVELPRIALIAPQFGLQIEPDGRRTWALSRDTSDESAVPVIGS 148

Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201
           + V  G +K +         ++              S     +    +  +  G + N+ 
Sbjct: 149 LLVDQGSLKYLSAAQGANIAVT-------------FSLSPELAGPLPLSYKAAGKWKNEV 195

Query: 202 SAFKITAN---FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS 258
            +                    I++  LA    +   G++            F + G   
Sbjct: 196 FSASGRTGGVLQLRAKTQAPFPIEISALAGKTSLKAQGSIANLADLAGVDATFDLRGRNL 255

Query: 259 KLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313
           + L   +          ++ G          +S+ +      +     +   +  Q    
Sbjct: 256 EELYKLVGVVLPSTLPYKVRGKLAKHGKVWAVSQIQGVLGSTD----INGALRFDQSAAV 311

Query: 314 LLNFSENGAESMHDLNETD 332
            +  + N    + D  +  
Sbjct: 312 PV-LTGNLQSKLLDFGDLG 329


>gi|200388120|ref|ZP_03214732.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|199605218|gb|EDZ03763.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
          Length = 686

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/341 (10%), Positives = 92/341 (26%), Gaps = 45/341 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +D+ +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    GRI I D+ S     +  ++        + ++     
Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-IDPLGKPLPFSEVTGTKGK 206

Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + K +        +  G ++ +              ++++    +Q    +    +   G
Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286
            +    K          +GD    L                  RL         +V    
Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326

Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH 326
            +  +    +           +       L       +   
Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRL 363


>gi|16762692|ref|NP_458309.1| hypothetical protein STY4193 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29144179|ref|NP_807521.1| hypothetical protein t3907 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213426513|ref|ZP_03359263.1| hypothetical protein SentesTyphi_13380 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213609630|ref|ZP_03369456.1| hypothetical protein SentesTyp_03475 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|289824319|ref|ZP_06543912.1| hypothetical protein Salmonellentericaenterica_03964 [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25339937|pir||AC0986 probable membrane protein STY4193 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16504998|emb|CAD08015.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139816|gb|AAO71381.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 686

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +D+ +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQESGWRSWVPWPHVHAEDVILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    GRI I D+ S     +  ++        + ++     
Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206

Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + K +        +  G ++ +              ++++    +Q    +    +   G
Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286
            +    K          +GD    L                  RL         +V    
Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFNYR 326

Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344
            +  +    +           +       L       +    DL      +      K+ 
Sbjct: 327 GFNGRIGDSD----IHGTFTYTTGKPSPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
           +  K   Q    K  +  +       + F  DK
Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409


>gi|321226661|gb|EFX51711.1| hypothetical protein YhjG [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
          Length = 688

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/341 (10%), Positives = 92/341 (26%), Gaps = 45/341 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +D+ +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    GRI I D+ S     +  ++        + ++     
Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-IDPLGKPLPFSEVTGTKGK 206

Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + K +        +  G ++ +              ++++    +Q    +    +   G
Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286
            +    K          +GD    L                  RL         +V    
Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326

Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH 326
            +  +    +           +       L       +   
Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRL 363


>gi|194442684|ref|YP_002042858.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194401347|gb|ACF61569.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
          Length = 686

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +D+ +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLTQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    GRI I D+ S     +  ++        + ++     
Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206

Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + K +        +  G ++ +              ++++    +Q    +    +   G
Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286
            +    K          +GD    L                  RL         +V    
Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326

Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344
            +  +    +           +       L       +    DL      +      K+ 
Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
           +  K   Q    K  +  +       + F  DK
Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409


>gi|320539118|ref|ZP_08038789.1| putative assembly protein [Serratia symbiotica str. Tucson]
 gi|320030756|gb|EFW12764.1| putative assembly protein [Serratia symbiotica str. Tucson]
          Length = 610

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/385 (11%), Positives = 120/385 (31%), Gaps = 54/385 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+L  L  L  V++ G   + L ++  DFR    ++     G ++ + G ++ HI P 
Sbjct: 1   MRRLLTALVILLVVLVAGMSALVLLVNPNDFRAYMVKKVEQNSGYQLMLAGDLRWHIWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    I +      +     E + +  + LPLLS  + V  + +    +     S+  
Sbjct: 61  LSILSGHITLTAPGAQAPLVSAENMRLDVKLLPLLSHHLFVKQVMLKNAVIRLTPDSEEQ 120

Query: 122 SNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                          ++D    + ++ + +    + I  + +D+   + D+NL +     
Sbjct: 121 PPVDAPIAPVDPVAESVDTPWKLGIDNLRIVD-SLLIWQRANDEQINVRDINLTLQQNDQ 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                                     + A     N   ++   ++   +    YP  I+ 
Sbjct: 180 R-----------------------QVQMALSSRINRDQRDLTFTMAADIDLQHYPRQINA 216

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                      +    + +AG       ++    +      ++ +  ++  +   + +  
Sbjct: 217 K----------LTRFNYLLAGADILNGGIK---GEGHAQVAYQQTPPHIVFNPVSISA-- 261

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354
             +          +  E   L  + + A    D      ++     ++   +       +
Sbjct: 262 --NDNQFTGDVSTTVAEVPALVMNWSSANLNLD--ALSGWQSRTSSSE-PQVTASAPVIA 316

Query: 355 VNKKEEKDNSHDKENQENFSGDKMI 379
                  D   D     +F+   ++
Sbjct: 317 SQID---DQQQDLAALRDFNAQLIM 338


>gi|91205653|ref|YP_538008.1| Outer membrane assembly protein [Rickettsia bellii RML369-C]
 gi|157826890|ref|YP_001495954.1| Outer membrane assembly protein [Rickettsia bellii OSU 85-389]
 gi|91069197|gb|ABE04919.1| Outer membrane assembly protein [Rickettsia bellii RML369-C]
 gi|157802194|gb|ABV78917.1| Outer membrane assembly protein [Rickettsia bellii OSU 85-389]
          Length = 841

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 50/373 (13%), Positives = 130/373 (34%), Gaps = 23/373 (6%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFESKIEGLS 87
            +++     +    + + + + G IK+ +LP P++   ++++    K    +   +E   
Sbjct: 29  NNYKGIIINKVKETINRDLTINGDIKLSLLPNPAISLPEVKLSSIDKTKEPYLVSVENAK 88

Query: 88  MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------------------QRKS 129
              + LPL  G I V  + + +P +NF + + G  NW                      +
Sbjct: 89  ASLKLLPLFRGAIEVASVELQKPVINFEVLNNGQKNWEFSTPKNKAEINQDAPIPTASSN 148

Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189
             ++   +++    +  G+I   +  +++++   +L+  + +    I   L +++++  +
Sbjct: 149 KNEIELPILINHFKISDGKIIYRENGNEKIFNNINLDTHVKSTKGPIDFTLVLEALEQKI 208

Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
             +G      K        N   +   I  K+     ++  + ++ GN            
Sbjct: 209 YIDGNIEEIGKVIPLSANINIADEKIKIEGKLDSENNSFIGLANIKGNTKTLGLPSDLQN 268

Query: 250 VFSVAGDFSKL-LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308
            + +         NL L   +   +    +++ N  I    L++ +  +  +       +
Sbjct: 269 DYELTASIIADSKNLNLKDARLNYTNIELLANVNYDIEHSSLKANIIANPGNIIGDISSN 328

Query: 309 QDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEE--KDNSHD 366
            D+ ++ N +   A             + +K     + K   I   V   +     N + 
Sbjct: 329 LDKASIFNGNIKIAADNLQPLLNALKIKTDKLPPIINQKISLISNVVYNSQALILHNINL 388

Query: 367 KENQENFSGDKMI 379
                N SGD  +
Sbjct: 389 IAGNSNLSGDVTL 401


>gi|91975912|ref|YP_568571.1| AsmA [Rhodopseudomonas palustris BisB5]
 gi|91682368|gb|ABE38670.1| AsmA [Rhodopseudomonas palustris BisB5]
          Length = 655

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/318 (17%), Positives = 114/318 (35%), Gaps = 29/318 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R+ I +  L +V ++ A T+ L ID    R+  E Q     G ++A+ G I++ I P 
Sbjct: 5   IKRLGISVAALIAVAVICALTLSLLIDRGAMRQAVESQLRAATGLELAIDGPIEVAIFPR 64

Query: 62  PSVFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V FK +R+   +   G     ++ L+     LPLL     + D+ + QP +     ++
Sbjct: 65  SYVTFKAVRLKSSEDGGGDTALSVDTLTATLRLLPLLLRRFEIADVVLFQPTIRVIRDAE 124

Query: 120 GVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
           G SNW        R     +   V   +I ++ G +   D  +  +  + D++L      
Sbjct: 125 GGSNWTPFIKSLTRTMKPGLDEQVSFSEIRLQDGVLNYQDDANHTLENIGDIDL------ 178

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP-AKNKAISLKIQLFPLAYPIII 232
                 L+  SI  +  A G  ++  +R    I+              ++L     P+ I
Sbjct: 179 -----SLAWPSISRTFAAAGQFDWRGERIDGSISVGDFIQALAGDRSSLKLRLAGAPMKI 233

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVR 284
              G +  N    +  G  +      +        +           +     +   ++ 
Sbjct: 234 AFDGAIA-NRSSLVLEGTLTADSASLRNALRWAGQEPPGAGGFGRFAMKARANLVGPSIA 292

Query: 285 ISRYKLQSILPNSSTDED 302
           ++   ++     +     
Sbjct: 293 LTNVNIELDKNVAEGVMT 310


>gi|186897336|ref|YP_001874448.1| AsmA family protein [Yersinia pseudotuberculosis PB1/+]
 gi|186700362|gb|ACC90991.1| AsmA family protein [Yersinia pseudotuberculosis PB1/+]
          Length = 741

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 49/422 (11%), Positives = 108/422 (25%), Gaps = 103/422 (24%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           +VL+G+     + LV A       DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGE 65

Query: 58  ------ILPFPSVFFKDIRIDQ-------------------------KEDGSFESKIEGL 86
                  +P+P +  +D+ +                                    ++ +
Sbjct: 66  GPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEGEMVTLKRI 125

Query: 87  SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIH 143
                 L LL+ E+R+  +++ QP ++    + G +NW       ST     +V +  I 
Sbjct: 126 DASIAPLSLLNKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSSSWSVDIGDII 185

Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI------------- 190
              G I + D    Q   L+ ++    A     ++ +   +   SV              
Sbjct: 186 FDRGEITLKDAIL-QADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSANTTTSVVT 244

Query: 191 ----------------------------------AEGTGNFDNKRSAFKITANFPAK--N 214
                                              +  G +  +               +
Sbjct: 245 TTATATTNPVTETETETETETETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMISMND 304

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR--- 271
             +   +Q         + + G L              ++G     L   L         
Sbjct: 305 ANVPFPLQADMRYGSTQVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPP 364

Query: 272 ------LSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
                 LS   K + G V     +  +    +   D              L    +  + 
Sbjct: 365 YQTEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLT---YTDSQPRPKLAGQVDSEKL 421

Query: 325 MH 326
             
Sbjct: 422 RF 423


>gi|168235210|ref|ZP_02660268.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194735296|ref|YP_002116547.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|194710798|gb|ACF90019.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197291481|gb|EDY30833.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
          Length = 686

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/392 (11%), Positives = 102/392 (26%), Gaps = 50/392 (12%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +D+ +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVIVGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP---- 179
                +      +  L+ I    GRI I D+ S     +    L     F  +       
Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITILIDPLGKPLPFSEVTGTKGKE 207

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGN 237
                       +  G ++ +              ++++    +Q    +    +   G 
Sbjct: 208 DKSSVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSGV 267

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISR 287
           +    K          +GD    L                  RL         +V     
Sbjct: 268 VNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYRG 327

Query: 288 YKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDD 345
           +  +    +           +       L       +    DL      +      K+ +
Sbjct: 328 FNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDAE 379

Query: 346 LKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
             K   Q    K  +  +       + F  DK
Sbjct: 380 QSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409


>gi|168232443|ref|ZP_02657501.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|194469033|ref|ZP_03075017.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194455397|gb|EDX44236.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|205333253|gb|EDZ20017.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
          Length = 686

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +D+ +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    GRI I D+ S     +  ++        + ++     
Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206

Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + K +        +  G ++ +              ++++    +Q    +    +   G
Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286
            +    K          +GD    L                  RL         +V    
Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326

Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344
            +  +    +           +       L       +    DL      +      K+ 
Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
           +  K   Q    K  +  +       + F  DK
Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409


>gi|161616667|ref|YP_001590632.1| hypothetical protein SPAB_04484 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|168241770|ref|ZP_02666702.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|194449561|ref|YP_002047639.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|198243449|ref|YP_002217570.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|207858848|ref|YP_002245499.1| hypothetical protein SEN3433 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|161366031|gb|ABX69799.1| hypothetical protein SPAB_04484 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194407865|gb|ACF68084.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|197937965|gb|ACH75298.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|205339018|gb|EDZ25782.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|206710651|emb|CAR35009.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326625352|gb|EGE31697.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 686

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +D+ +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLTQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    GRI I D+ S     +  ++        + ++     
Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206

Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + K +        +  G ++ +              ++++    +Q    +    +   G
Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286
            +    K          +GD    L                  RL         +V    
Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326

Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344
            +  +    +           +       L       +    DL      +      K+ 
Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
           +  K   Q    K  +  +       + F  DK
Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409


>gi|330446435|ref|ZP_08310087.1| asmA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328490626|dbj|GAA04584.1| asmA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 722

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/402 (9%), Positives = 116/402 (28%), Gaps = 65/402 (16%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L  L  +  VV++G   +   ++   F+     Q     G+ + + G I     P 
Sbjct: 1   MKKLLYVLLGIIIVVVLGIVALVTLVNPNQFKPVIAEQVKEQTGRDLVISGDIGWRFFPT 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +   +  +   +        + +   +    LPLLS ++ +  + +D  H+       
Sbjct: 61  LGLNVGETALKNPQGFAQPNLIQFKQAELSVAVLPLLSHKLDIGTVSLDGAHVFVQTLKD 120

Query: 120 GVSNWFQRKSTMDM-------------------------IHNVILEKIHVKGGRIKIIDQ 154
           G SN                                      V L  + +    + ++++
Sbjct: 121 GRSNLDDLTKQSTPTSPQESTAAPASKPAKETASKAAEKSWQVSLAGVKLLNASVDVVNE 180

Query: 155 ESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKR--------- 201
           ++     L+ +N  +       +      ++  +       +G+   +            
Sbjct: 181 KTGSNIALNKVNFTLDTLAPNIWTKAQFDMAGVANGLQFTTQGSTELNLSASYKLCELKD 240

Query: 202 SAFKITAN----------------FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
               +TA                    +   ++L+ +        +      L  +  + 
Sbjct: 241 LQLSLTAKDAKTDIKHAQINVDHFKFGEWATLTLQAEGKLSDIAFVTKGQTQLTLSSAKN 300

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRL--SGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
           I +       +      L     +  L  + ++ ++     +S++   +           
Sbjct: 301 ILTLENLSLENSLSGKALPRPNMQVNLKTNASYDVATKTATLSKFSANA----DELAVSG 356

Query: 304 KTKVSQDEENLLNFSENGAESMHDL---NETDFFEEEEKKNK 342
                  +  ++ F+ +  +   D     ET    E++K  +
Sbjct: 357 NASFVNHDVPVIRFNFSSDKIDLDRWMTAETSAPTEQKKVPE 398


>gi|197248741|ref|YP_002148538.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197212444|gb|ACH49841.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
          Length = 686

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +D+ +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWSFNLAQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    GRI I D+ S     +  ++        + ++     
Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206

Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + K +        +  G ++ +              ++++    +Q    +    +   G
Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286
            +    K          +GD    L                  RL         +V    
Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326

Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344
            +  +    +           +       L       +    DL      +      K+ 
Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
           +  K   Q    K  +  +       + F  DK
Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409


>gi|296157803|ref|ZP_06840637.1| AsmA family protein [Burkholderia sp. Ch1-1]
 gi|295892049|gb|EFG71833.1| AsmA family protein [Burkholderia sp. Ch1-1]
          Length = 839

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 69/177 (38%), Gaps = 16/177 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           + +++  L  +  +++V      L  DW   R     + T  +G+  A+ G +K+     
Sbjct: 11  IGKIVAWLVAIIVILIVALTIFILTFDWNRARPYINDKVTQAIGRPFAINGDLKVGWRHP 70

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P     +I +   +       + ++ +  + + LPLL+ +I +  + +
Sbjct: 71  VGETGWRGWVPWPRFSAANITVGNPDWTKQPQFATLDEIDFQVKVLPLLTHDIVIPAINL 130

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFL 162
             P ++      G +NW  + ++        + L  I    G I + DQ+      +
Sbjct: 131 VNPSVDLERLLDGRNNWTFKLASSSGPSEWKLDLHDIAFAKGNIALSDQQKKVDLQM 187


>gi|167549165|ref|ZP_02342924.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|168818568|ref|ZP_02830568.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205325713|gb|EDZ13552.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205344369|gb|EDZ31133.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|320088029|emb|CBY97791.1| Uncharacterized protein yhjG [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 686

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +D+ +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDVILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    GRI I D+ S     +  ++        + ++     
Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206

Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + K +        +  G ++ +              ++++    +Q    +    +   G
Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286
            +    K          +GD    L                  RL         +V    
Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326

Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344
            +  +    +           +       L       +    DL      +      K+ 
Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
           +  K   Q    K  +  +       + F  DK
Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409


>gi|165933055|ref|YP_001649844.1| outer membrane assembly protein [Rickettsia rickettsii str. Iowa]
 gi|165908142|gb|ABY72438.1| outer membrane assembly protein [Rickettsia rickettsii str. Iowa]
          Length = 839

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 57/383 (14%), Positives = 131/383 (34%), Gaps = 28/383 (7%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFES 81
           P FI   +++E    +      + + + G IK+ +LP P++   DI++            
Sbjct: 32  PFFIPLNNYKEIVIDKVKEATNRDLTINGDIKLSLLPNPAISLSDIKLSSINGTKEPHLV 91

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-------- 133
            +EG        PL  G I V  + + +P +N  + S G  NW                 
Sbjct: 92  SVEGAKASLRLFPLFRGAIEVASIELQKPIINLEVLSNGQKNWQFSTPNNASKTNELSSV 151

Query: 134 ---------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
                       +++    +  G++  I++ S++++   +L  +I +    I   L++ +
Sbjct: 152 ESTDTKTELALPILISHFKIIDGKVIYIEKNSEKIFNDINLETKIKSLKGPIDLTLALKA 211

Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
           ++  +  +G      K        N   +   I  K      A+    ++ GN       
Sbjct: 212 LEQQINIDGNIEEIGKIIPLSANINLAGEKITIEGKFDSENNAFIGNTNIKGNTKTLGMP 271

Query: 245 PIYSGVFSVAGD-FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
                 + +     +   N+ +   +        +++ N  I R  L+S +  +  +   
Sbjct: 272 ADLQNDYELTTAITADSKNIAIKDARLNYPNIELLANANYDIERNNLKSNIIINPGNIIT 331

Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS-------VN 356
           +   + D+ N++    +  + + D  +    +     N+   L  + I  +       +N
Sbjct: 332 EISSNLDKTNIM-LQADSLKPILDALKLKTDKLPSIINQKLILTSNVISNAQAIKLQNIN 390

Query: 357 KKEEKDNSHDKENQENFSGDKMI 379
                 N       +N + D  I
Sbjct: 391 LSAANTNLTGDIELKNLAQDITI 413


>gi|222055926|ref|YP_002538288.1| AsmA family protein [Geobacter sp. FRC-32]
 gi|221565215|gb|ACM21187.1| AsmA family protein [Geobacter sp. FRC-32]
          Length = 657

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 56/376 (14%), Positives = 127/376 (33%), Gaps = 38/376 (10%)

Query: 2   LRRVL----IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           +++ L    I    +  + LV A  V L +     R+     A   + +++ + G + + 
Sbjct: 1   MKKTLKITGIIFAAIAVLFLVIAVLVKLLVTPEGVRKTVLPLAEKKLQRQVQL-GEVSVS 59

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
           I     +  K + + +K       + E + ++  F PLL+G + V  + +D P +     
Sbjct: 60  IFS--GIVLKKLTVMEKTGADPFVQAEQVKLKYRFWPLLTGRVVVDQVVLDTPKIRVIRL 117

Query: 118 SKGVSN---------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ----VYFLSD 164
             G  N               T     N+++ ++ +  G +   D+        +Y ++ 
Sbjct: 118 PDGTFNYSDLMAKKEPAPAPQTTKEGINLLISRVALLKGAVHYEDRSKKTDQPFIYDITG 177

Query: 165 LNLQISARFLNIISPLSIDSI--KGSVIAEGTGNFDNKRSAFKITANFPAKNKAI----- 217
           + +  S   ++   PL + ++    S+  +G      K+ A  +       +        
Sbjct: 178 VEVNASDIAMDKQFPLRVKAMVPGASMEMDGKAADVGKKPAIDVVITIKEADIKKLAAGL 237

Query: 218 --SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
              L  ++  L     +++  +L      P    +          +    S ++  LSG 
Sbjct: 238 PPQLTAKIRALDPSGAVNVRLHLAGPVSAP--KELLKAGEVKLNNVAFTTSGQRPSLSGL 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335
             +    +      L           D K  VS      L+ + + +    DL     F 
Sbjct: 296 LVLKGSQLSSQDLTLAMGA----NKLDIKFTVSNLLGKPLSVTSSVSAERFDLEP---FL 348

Query: 336 EEEKKNKNDDLKKDDI 351
           ++ KK    + +K + 
Sbjct: 349 KKSKKATAAEGEKPEP 364


>gi|157828346|ref|YP_001494588.1| outer membrane assembly protein [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|157800827|gb|ABV76080.1| outer membrane assembly protein [Rickettsia rickettsii str. 'Sheila
           Smith']
          Length = 830

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 56/383 (14%), Positives = 130/383 (33%), Gaps = 28/383 (7%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFES 81
           P FI   +++     +      + + + G IK+ +LP P++   DI++            
Sbjct: 23  PFFIPLNNYKGIVIDKVKEATNRDLTINGDIKLSLLPNPAISLSDIKLSSINGTKEPHLV 82

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-------- 133
            +EG        PL  G I V  + + +P +N  + S G  NW                 
Sbjct: 83  SVEGAKASLRLFPLFRGAIEVASIELQKPIINLEVLSNGQKNWQFSTPNNASKTNELSSV 142

Query: 134 ---------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
                       +++    +  G++  I++ S++++   +L  +I +    I   L++ +
Sbjct: 143 ESTDTKTELALPILISHFKIIDGKVIYIEKNSEKIFNDINLETKIKSLKGPIDLTLALKA 202

Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
           ++  +  +G      K        N   +   I  K      A+    ++ GN       
Sbjct: 203 LEQQINIDGNIEEIGKIIPLSANINLAGEKITIEGKFDSENNAFIGNTNIKGNTKTLGMP 262

Query: 245 PIYSGVFSVAGD-FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
                 + +     +   N+ +   +        +++ N  I R  L+S +  +  +   
Sbjct: 263 ADLQNDYELTTAITADSKNIAIKDARLNYPNIELLANANYDIERNNLKSNIIINPGNIIT 322

Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS-------VN 356
           +   + D+ N++    +  + + D  +    +     N+   L  + I  +       +N
Sbjct: 323 EISSNLDKTNIM-LQADSLKPILDALKLKTDKLPSIINQKLILTSNVISNAQAIKLQNIN 381

Query: 357 KKEEKDNSHDKENQENFSGDKMI 379
                 N       +N + D  I
Sbjct: 382 LSAANTNLTGDIELKNLAQDITI 404


>gi|259419126|ref|ZP_05743043.1| AsmA [Silicibacter sp. TrichCH4B]
 gi|259345348|gb|EEW57202.1| AsmA [Silicibacter sp. TrichCH4B]
          Length = 680

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 49/393 (12%), Positives = 118/393 (30%), Gaps = 33/393 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R +L  L  +   V VG   +  F+      E   +Q     G+++   G ++    P 
Sbjct: 33  MRLILRILSAIVITVAVGIAIL-TFLPGQKIAELAAQQIEKQTGRQVVFGGDVRFSFWPT 91

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +   ++     +            L++  +   L+ G+IR+ ++ +  PHLN      
Sbjct: 92  LGIQADNVAFANADWAGPEPLLTAGRLTIGVDAADLIRGDIRITELTVIIPHLNLETRED 151

Query: 120 GVSNWFQRKSTMDMIHN------------VILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
           G+ NW   + + D   +              +E + + G  ++        V  ++ ++L
Sbjct: 152 GIGNWVFERGSSDAPADGAASETGGDEASFAIEAVTLNGASLRYA-PFGQDVIEMNQVDL 210

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGT-GNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
            +     N  + + +     ++   G       +   FK        +  +SL  +    
Sbjct: 211 SLKWPDPNGTANVDL-----TLRPAGKPVRLQGEVGRFKSFLLGEVTSIGMSLTAEASKA 265

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK-KSRLSGNFKIS-DGNVR 284
            +  + DL G                +A    + + +      K   + +   + DG + 
Sbjct: 266 RFDGLADLTGAFDGRITGASEDTRALMAALGMEPVEIPRGLGRKVLFAADTTYTPDGRIS 325

Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEEN-LLNFSENGAESMHDLNETD----FFEEEEK 339
           +    L                ++       +  +  G        +             
Sbjct: 326 LRDLSL----SLDENALRGGADLNLGASPMQVTAALKGEVLDFSALDAPGTTTSGAGGGS 381

Query: 340 KNKNDDLKKDDIQYSVNKKEEKDNSHDKENQEN 372
           +  +     D I  S+    +   S D +  + 
Sbjct: 382 EAPSQGWSTDPIDASMLGLVDGQISLDVQGLKT 414


>gi|222147632|ref|YP_002548589.1| AsmA family protein [Agrobacterium vitis S4]
 gi|221734620|gb|ACM35583.1| AsmA family protein [Agrobacterium vitis S4]
          Length = 651

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 49/374 (13%), Positives = 99/374 (26%), Gaps = 59/374 (15%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           + R  +  +     V +      P  +  +  R   E+  +   G  + + G   +   P
Sbjct: 40  LARTAIAVIAVALCVFVASRLAAPYIVSSSLVRGSIEKAISRWSGHDVEIAGTPSLQFWP 99

Query: 61  FPSVFFKDIRIDQKEDGSF----------ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110
            P +   D+ I  ++               + I+ LS     +    G     D ++ +P
Sbjct: 100 EPRITLPDVTITDRDPAQSGGTAGKAKRVLAHIDVLSASFGLVHAAMGNPVFDDFHLSRP 159

Query: 111 HLNFYLSSKGVSNWFQRKSTMDMIHNV----------------ILEKIHVKGGRIKIIDQ 154
           H+    +++G  +W  +    D I +V                 +  I ++ GRI I DQ
Sbjct: 160 HIYMRRNTQGHLDWAGQGLLSDAISHVQESIKGGQSLDKAYDARIGSITIENGRIDIEDQ 219

Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214
              +   +  +            S L    +    I           +     +  P   
Sbjct: 220 PLQRRVVIDSI-----------FSHLFWPVMSAPAIGNANMIIGGVATQLDFASTQPLIL 268

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270
               +    F L  P +   F            SG  S+       L     A       
Sbjct: 269 LGGGVGQAEFSLTAPTLKGSFSGKTGLAPARFASGQLSLTISNVPGLLAWTGATLPGTEA 328

Query: 271 ----RLSGNFKISDGNVRISRYKLQSILPNS------------STDEDNKTKVSQDEENL 314
                ++         VR+      +   ++                       Q +   
Sbjct: 329 LHTVSVNATVTAETDKVRLDSLSFTANDTSATGLMEMAQAKSGKPKLSGTLAFEQMDIPT 388

Query: 315 L--NFSENGAESMH 326
               FS +  ++ H
Sbjct: 389 FLGAFSLSAPDTSH 402


>gi|297520369|ref|ZP_06938755.1| predicted outer membrane biogenesis protein [Escherichia coli OP50]
          Length = 282

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 82/277 (29%), Gaps = 28/277 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           P       S+  +NW            +      +  L+ I    GRI I D+ S     
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLE 185

Query: 162 L----SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNK 215
           +        L  S    +                +  G ++ +              + +
Sbjct: 186 IFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGE 245

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS 252
                +Q    +    +   G +    K         
Sbjct: 246 GTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLK 282


>gi|114777137|ref|ZP_01452157.1| hypothetical protein SPV1_07234 [Mariprofundus ferrooxydans PV-1]
 gi|114552658|gb|EAU55118.1| hypothetical protein SPV1_07234 [Mariprofundus ferrooxydans PV-1]
          Length = 762

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 49/361 (13%), Positives = 110/361 (30%), Gaps = 51/361 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + +        +++V   T P FID   ++   E++   + G+K+ + G I   + P+
Sbjct: 3   MPKTVRYSLVFVGLLIVLLLTAPFFIDVNTYKGQIEQKVEDVTGRKLTI-GKISASLFPW 61

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V   ++ +  ++  S      ++ L ++   +PLLS  + +    I +P +       
Sbjct: 62  VGVELDNVHLANRKGFSTHDFISVKKLHVKLALIPLLSKNVEIKHFEIVEPSVYLERHDD 121

Query: 120 GVSNW----------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD 157
           G SNW                          +    +  +  E + +  G +  +D ++ 
Sbjct: 122 GQSNWGDLASSPATPAAASTTTSDVDTDSGAAGGMALAALQAESLSLTDGELTWVDGKA- 180

Query: 158 QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217
           +   L++LN+ ++   L              V  + +G  D                  +
Sbjct: 181 KPVALTELNVALNDVQLKR-----------PVAVKVSGKLDGNAFDLDANVGPVGDLTKL 229

Query: 218 -SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV------AGDFSKLLNLELSAKKS 270
             + + +        I L          P   G  +       A    +   L L     
Sbjct: 230 DPVSLPVQGKLKAEQIRLQPFADMITGWPAELGDIAKAVVGVSANIEQRPGGLRLGEGSV 289

Query: 271 RLSGNFKIS----DGNVRISRYKLQ--SILPNSSTDEDNKTKVS-QDEENLLNFSENGAE 323
            L    K+              KLQ  ++  + S     K +++            +   
Sbjct: 290 TLDAAHKLDVNWKAEMSGKDELKLQRVALAVDDSPLLAVKGRINRLSGTPSFELHIDSQP 349

Query: 324 S 324
            
Sbjct: 350 I 350


>gi|148266344|ref|YP_001233050.1| hypothetical protein Gura_4334 [Geobacter uraniireducens Rf4]
 gi|146399844|gb|ABQ28477.1| protein of unknown function DUF748 [Geobacter uraniireducens Rf4]
          Length = 1169

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 54/364 (14%), Positives = 119/364 (32%), Gaps = 46/364 (12%)

Query: 2   LRRV----LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++R     L+ +G +  +V   AF +P  +     +    ++     G+K+A+ G   I 
Sbjct: 1   MKRWQKAALLTVGIVLLLVCFVAFALPGIV-----KSQAVKRVEAATGRKLAIGG---IS 52

Query: 58  ILPFP-SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           I PF  +V  +D R+ ++  G   +    + +      +      + +  I  P+L    
Sbjct: 53  INPFVWTVVVRDFRLSERRGGETFAAFSSVRIAISPSSIFREAPIISEARITSPYLRIVR 112

Query: 117 SSKGVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQES--DQVYFLSDLNLQ 168
           +     ++        +K   + +    L  I V  G I  ID+    ++++ L  + L 
Sbjct: 113 TGANTYSFSDLLGGKKKKGPEEGLPRFSLNNIAVTNGSIDFIDRGLPVEKLHALRKVELT 172

Query: 169 IS-----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
           I          +        ++         G       A + +A    K+ A+   +  
Sbjct: 173 IPFVTTIPYLADRYITPRFSAVVNGAPLHVEGKLRPFPKAVEASATVDLKDIALPFYLAY 232

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
            P   PI ++              SG  S           +    +   +GN  ++   V
Sbjct: 233 VPGELPIRVE--------------SGRMSTK-LSVNYRAAQKENPELAFNGNVTLAGIKV 277

Query: 284 --RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341
             R     L     ++      + ++   E ++ + S +G E     ++   +       
Sbjct: 278 ADRTGAPFLSLARLDAGIT---RARLLTGEYDISSVSADGLEVFLSRDKKGVWSHSRLVG 334

Query: 342 KNDD 345
           K   
Sbjct: 335 KASP 338


>gi|161505847|ref|YP_001572959.1| hypothetical protein SARI_04024 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867194|gb|ABX23817.1| hypothetical protein SARI_04024 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 686

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 38/340 (11%), Positives = 85/340 (25%), Gaps = 43/340 (12%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +DI +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDIILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + QP       S   +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATIAPLALLTKTVWLPWIKLVQPDARLIRLSGKTNNWTFNLAQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP---- 179
                +      +  L+ I    GRI   D+ S     +    L     F  +       
Sbjct: 148 ENLDPNAKPSAWSFRLDNILFDQGRIAFDDKVSKADITILIDPLGKPLPFSEVTGTKGKE 207

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGN 237
                       +  G ++ +              ++++    +Q    +    +   G 
Sbjct: 208 DKTSVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSGV 267

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISR 287
           +    K          +GD    L                  RL         +V     
Sbjct: 268 VNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYRG 327

Query: 288 YKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH 326
           +  +    +           +       L       +   
Sbjct: 328 FNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRL 363


>gi|229586613|ref|YP_002845114.1| Outer membrane assembly protein [Rickettsia africae ESF-5]
 gi|228021663|gb|ACP53371.1| Outer membrane assembly protein [Rickettsia africae ESF-5]
          Length = 839

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 55/383 (14%), Positives = 130/383 (33%), Gaps = 28/383 (7%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFES 81
           P FI   +++     +      + + + G IK+ +LP P++   +I++            
Sbjct: 32  PFFIPLNNYKGIVIDKVKEATNRDLTINGDIKLSLLPHPAISLSEIKLSSINGTKEPHLV 91

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-------- 133
            +EG        PL  G I V  + + +P +N  + S G  NW                 
Sbjct: 92  SVEGAKASLRLFPLFRGAIEVASIKLQKPIINLEVLSNGQKNWQFSTPNNASKTNELSSV 151

Query: 134 ---------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
                       +++    +  G++  I++ S++++   +L  +I +    I   L++ +
Sbjct: 152 ESTNTKTELALPILISHFKIIDGKVIYIEKNSEKIFNDINLKTKIKSLKGPIDLTLALKA 211

Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
           ++  +  +G      K        N   +   I  K      ++    ++ GN       
Sbjct: 212 LEQQINIDGNIEEIGKIIPLSANINLAGEKIKIEGKFDSENNSFIGNANIKGNTKTLGMP 271

Query: 245 PIYSGVFSVAGD-FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
                 + +     +   N+ +   +        +++ N  I R  L+S +  +  +   
Sbjct: 272 ADLQNDYELTTAITADSKNIAIKDARLNYPNIALLANANYDIERNNLKSNIIINPGNIIT 331

Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS-------VN 356
           +   + D+ N++    +  + + D  +    +     N+   L  + I  S       +N
Sbjct: 332 EISSNLDKTNIM-LQADSLKPILDALKLKTNKLPPIINQKLILTSNVISNSQAIKLQNIN 390

Query: 357 KKEEKDNSHDKENQENFSGDKMI 379
                 N       +N + D  I
Sbjct: 391 LSAANSNLTGDIELKNLAQDITI 413


>gi|213857573|ref|ZP_03384544.1| hypothetical protein SentesT_20731 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 670

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 36/341 (10%), Positives = 92/341 (26%), Gaps = 45/341 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +D+ +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQESGWRSWVPWPHVHAEDVILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    GRI I D+ S     +  ++        + ++     
Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206

Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + K +        +  G ++ +              ++++    +Q    +    +   G
Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286
            +    K          +GD    L                  RL         +V    
Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFNYR 326

Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH 326
            +  +    +           +       L       +   
Sbjct: 327 GFNGRIGDSD----IHGTFTYTTGKPSPKLEGDVESRQLRL 363


>gi|224585406|ref|YP_002639205.1| hypothetical protein SPC_3684 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224469934|gb|ACN47764.1| hypothetical protein SPC_3684 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 686

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 46/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +DI +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDIILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLTQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    GRI I D+ S     +  ++        + ++     
Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206

Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + K +        +  G ++ +              ++++    +Q    +    +   G
Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286
            +    K          +GD    L                  RL         +V    
Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326

Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344
            +  +    +           +       L       +    DL      +      K+ 
Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
           +  K   Q    K  +  +       + F  DK
Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409


>gi|115351762|ref|YP_773601.1| AsmA family protein [Burkholderia ambifaria AMMD]
 gi|115281750|gb|ABI87267.1| AsmA family protein [Burkholderia ambifaria AMMD]
          Length = 765

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 65/209 (31%), Gaps = 16/209 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           + +    +  + ++V+V         DW   +       +  +G+  A+ G +++     
Sbjct: 7   IGKSAAWIVGIVALVIVATGIFIFTFDWNHAKPWVNEHVSTALGRSFAIHGDLRVDWHRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      + I   +   G     ++        LPL + +I +  +  
Sbjct: 67  QGETGWRAWVPWPRFSATQLEIGNPDWAKGPKFVTLDAAHFDLAILPLFTHQIVIPSIDA 126

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P ++    + G + W             N+ L+      G I   D  +     ++  
Sbjct: 127 VNPAVDLERLADGRNTWTFEFKQSGKPTRWNLRLDSFAFAKGTIVYRDAITKADLTIAVD 186

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194
            L       +++      S+  S    G 
Sbjct: 187 TLGHPIPIGDVLKEQEQTSLAASAQHVGK 215


>gi|83952789|ref|ZP_00961519.1| AsmA family protein [Roseovarius nubinhibens ISM]
 gi|83835924|gb|EAP75223.1| AsmA family protein [Roseovarius nubinhibens ISM]
          Length = 652

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 40/348 (11%), Positives = 94/348 (27%), Gaps = 37/348 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R ++  L  L  V +V A    L +           Q     G+K+ + G  K+   P 
Sbjct: 1   MRWIIR-LMVLALVFVVIAVGSILLLPSERIARIAADQIAQATGRKVEMTGETKVSFYPV 59

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +      +   +        + +   +  +   L  G IR+  +    PH+       
Sbjct: 60  LGISTGRTTVANADWSDKGPMFQADSFKVGVDPQALFGGAIRITGLEAVNPHILLQKDKS 119

Query: 120 GVSNWFQ-------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
           G  NW                         + L++  + G ++  ID ++     + D+N
Sbjct: 120 GRVNWELNVEGVTTTGAGTESAPAQSSQLALTLDRALITGAQLTYIDDQAGSTTQIKDVN 179

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
             +        + +         +   TG             +           +     
Sbjct: 180 FDMRWPSYTGEATIDASFRPAQEVVSITGRIARLDHLIDGAVS----------DLTAKVS 229

Query: 227 AYPIIIDLFGNL-FWNEKQPIYSGVFSVAGDFSKLLN------LELSAKKSRLSGNFKIS 279
                +D  G +    +     S   S +  F   L        E   + + ++G+   S
Sbjct: 230 TKGGAVDFTGKVSSLPQAAGRISADLSDSSRFMTSLGQAALDLPEGLGRAASVAGDLTYS 289

Query: 280 D-GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
           + G + +     +    + ++       +       +    +      
Sbjct: 290 EAGRLSLRNLSAK---LDHNSLTGGVDFIPGGARPRIEAQLDAGALDL 334


>gi|238789832|ref|ZP_04633613.1| hypothetical protein yfred0001_9800 [Yersinia frederiksenii ATCC
           33641]
 gi|238722028|gb|EEQ13687.1| hypothetical protein yfred0001_9800 [Yersinia frederiksenii ATCC
           33641]
          Length = 581

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 35/351 (9%), Positives = 93/351 (26%), Gaps = 55/351 (15%)

Query: 36  FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95
             +Q     G ++ ++G ++ H+ P  S+      +      +     E + +  +  PL
Sbjct: 1   MVKQVERKSGYQLQLEGDLRWHVWPQLSIIAGRTALTAPGATAPVVSAENMRLDVKLWPL 60

Query: 96  LSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-------KSTMDMIHNVILEKIHVKGGR 148
           LS ++ +  + +    +     S+                        + + K+ V    
Sbjct: 61  LSHQLDIKQVMLKGAVIRLTPDSEIQQQPGAPVAPRGNAPVDEHRAWKLDINKVQVADSL 120

Query: 149 IKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208
           +     ++DQ   + D+NL++                                       
Sbjct: 121 LIWQRTDNDQ-VNVRDINLELQQDSQR-----------------------QVHITLSGRV 156

Query: 209 NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268
           N   ++ + S+        YP +     N             + + G    +  +     
Sbjct: 157 NRNQRDVSFSMAADADMGRYPQLFSANIN----------QFTYKLEGADIPVAGVS---G 203

Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328
           +  L  +++     + +++    +    +        K +  +      +        D 
Sbjct: 204 EGALQASYQSDIQQLLLNKLSFSA----NDNQLTGSAKATLGDVPDYVINLAADNLNLD- 258

Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSV---NKKEEKDNSHDKENQENFSGD 376
                F  E K   N          +      + + D   D     +F+  
Sbjct: 259 ---TIFGWEPKNTANSQDVVKQPGVTAPVIAVQADDDVGQDLRALRDFTAQ 306


>gi|15892395|ref|NP_360109.1| outer membrane assembly protein [Rickettsia conorii str. Malish 7]
 gi|15619545|gb|AAL03010.1| outer membrane assembly protein [Rickettsia conorii str. Malish 7]
          Length = 839

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 55/383 (14%), Positives = 130/383 (33%), Gaps = 28/383 (7%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFES 81
           P FI   +++     +      + + + G IK+ +LP P++   +I++            
Sbjct: 32  PFFIPLNNYKGIVIDKVKEATNRDLTINGDIKLSLLPNPAISLSEIKLSSINGTKEPHLV 91

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-------- 133
            +EG        PL  G I V  + + +P +N  + S G  NW                 
Sbjct: 92  SVEGAKASLRLFPLFRGAIEVASIELQKPIINLEVLSNGQKNWQFSTPNNASKTNELSSV 151

Query: 134 ---------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
                       +++    +  G++  I++ S++++   +L  +I +    I   L++ +
Sbjct: 152 ESTDTKTELALPILISHFKIIDGKVIYIEKNSEKIFNDINLETKIKSLKGPIDLTLALKA 211

Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
           ++  +  +G      K        N   +   I  K      ++    ++ GN       
Sbjct: 212 LEQQINIDGNIEEIGKIIPLSANINLAGEKIKIEGKFDSANNSFIGNANIKGNTKTLGMP 271

Query: 245 PIYSGVFSVAGD-FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
                 + +     +   N+ +   +        +++ N  I R  L+S +  +  +   
Sbjct: 272 ADLQNDYELTTAITADSKNIAIKDARLNYPNIELLANANYDIERNNLKSNIIINPGNIIT 331

Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS-------VN 356
           +   + D+ N++    +  + + D  +    +     N+   L  + I  S       +N
Sbjct: 332 EISSNLDKTNIM-LQADSLKPILDALKLKTDKLPPIINQKLILTSNVISNSQAIKLQNIN 390

Query: 357 KKEEKDNSHDKENQENFSGDKMI 379
                 N       +N + D  I
Sbjct: 391 LSAANSNLTGDIELKNLAQDITI 413


>gi|172060733|ref|YP_001808385.1| AsmA family protein [Burkholderia ambifaria MC40-6]
 gi|171993250|gb|ACB64169.1| AsmA family protein [Burkholderia ambifaria MC40-6]
          Length = 765

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 25/209 (11%), Positives = 64/209 (30%), Gaps = 16/209 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           + +    +  + ++++          DW   +       +  +G+  A+ G +++     
Sbjct: 7   IGKSAAWIVGIVALIIAATGVFIFTFDWNHAKPWVNEHVSTALGRSFAIHGDLRVDWHRP 66

Query: 57  -------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                    +P+P      + I   +   G     ++        LPL + +I +  +  
Sbjct: 67  QGETGWRAWVPWPRFSATQLEIGNPDWAKGPKFVTLDATHFDLAILPLFTHQIVIPSIDA 126

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P ++    + G + W             N+ L+      G I   D  +     ++  
Sbjct: 127 VNPAVDLERLADGRNTWTFEFKQSGKPTRWNLRLDSFAFAKGTIVYRDAITQADLTIAVD 186

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT 194
            L       +++      S+  S    G 
Sbjct: 187 TLGHPIPIGDVLKEQEQTSLAASAQHVGK 215


>gi|257093895|ref|YP_003167536.1| AsmA family protein [Candidatus Accumulibacter phosphatis clade IIA
           str. UW-1]
 gi|257046419|gb|ACV35607.1| AsmA family protein [Candidatus Accumulibacter phosphatis clade IIA
           str. UW-1]
          Length = 771

 Score =  116 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 96/290 (33%), Gaps = 17/290 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR   IG   +  + ++    V L  D   ++ D  R      G+ +A+ G +++   P 
Sbjct: 4   LRYAAIGFAAILGLAVLAIGVVALVFDANRYKADLVRIVQERTGRVLAIDGNLRLTFFPQ 63

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             V  + + +         + +    +    LPLL+G +    + +    +     + G 
Sbjct: 64  IGVVIERLALSGPAGAGKFASVGEARLGLALLPLLTGTVVANHVELADLDVELVKRADGT 123

Query: 122 SNWFQ---------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
           +N+                 + +       + ++ I ++   I   D+ S +   L+  +
Sbjct: 124 TNFEDLAPSHGHPAPAALPGQPAKPVAPLALEIDAIRLRHATIVWRDEASGRSLRLTGFD 183

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-P 225
            +           + I +   +       +           A        + L++    P
Sbjct: 184 ARSGRIAQGARGQVEIATRVEASEPTLKVDLKGSAGYRLDFARGAFAFDDVDLRLAGDAP 243

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLLNLELSAKKSRLSG 274
               ++  L G++  +  + +      SVA      L+L+ S  K RL+ 
Sbjct: 244 ADVGLVAMLRGDVEVDPARDLVDIAKLSVALTTRDGLDLKASVPKLRLTS 293


>gi|73540520|ref|YP_295040.1| AsmA [Ralstonia eutropha JMP134]
 gi|72117933|gb|AAZ60196.1| AsmA [Ralstonia eutropha JMP134]
          Length = 791

 Score =  116 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 56/436 (12%), Positives = 124/436 (28%), Gaps = 62/436 (14%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI---- 58
           R+V++       +++     + L  DW   +     + +  +G+  A+ G + +      
Sbjct: 5   RKVILWTVLTPILLIALLVILILTFDWNRLKPWLNERVSDAIGRPFAINGDLTVTWRTAE 64

Query: 59  --------LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
                   +P+P +  +DI I   +       + +  L      +PLL+ EI V  + ID
Sbjct: 65  GETGWHTLVPWPRLSARDITIGNPDWTKSPNIATVRELIFVLRPVPLLTHEIAVPTIVID 124

Query: 109 QPHLNFYLSSKGVSNW--FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-----QVYF 161
            P +     +   +NW             ++ + ++ +  G + + D+         V  
Sbjct: 125 SPAVWLERLADNRNNWTFDTGPKMGKSRWHLDIGEVVLARGNLALSDEAQKIELQASVDT 184

Query: 162 LSDLNLQISARFLNIISPLSID-------------------------SIKGSVIAEGTGN 196
           + D  L   AR   +++P +                           + +  +  +  G 
Sbjct: 185 IGDAALYEKARDGALVTPDASAPASESAPVAASAPSASGPPANAVAGNQRYGLRWKANGR 244

Query: 197 FDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254
           ++         A      +N  +   +            + G L              + 
Sbjct: 245 YNEASINASGKAGNVLSLRNVNVPFPLLADVRVGATRAVIEGTLTNPAHLAALDVYLHLQ 304

Query: 255 GDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
           GD    L                  RL    K          +  +    + S       
Sbjct: 305 GDSMAKLYALTGIVLPSTPPYETRGRLVATIKKGASVYAYRGFTGKVGGSDLSGTLTFTQ 364

Query: 306 KVSQDEENLLNFSENGAESMH-DLNET-DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDN 363
           +V      LL       E    DL        +  K   + ++++   +         + 
Sbjct: 365 RV---PRPLLAGELVSKELRFVDLAPLIGANAKPGKPAPDSNVRQPADKALPVAPFRTER 421

Query: 364 SHDKENQENFSGDKMI 379
               +    F+G +MI
Sbjct: 422 WDRIDADVRFTGKRMI 437


>gi|218550796|ref|YP_002384587.1| outer membrane biogenesis protein [Escherichia fergusonii ATCC
           35469]
 gi|218358337|emb|CAQ90984.1| putative outer membrane biogenesis protein [Escherichia fergusonii
           ATCC 35469]
          Length = 686

 Score =  116 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 48/381 (12%), Positives = 106/381 (27%), Gaps = 38/381 (9%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P +  +DI +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVIWERQKQETGWRSWVPWPHIHAEDIILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + +++P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWVKLEKPDARLIRLSEKNNNWTFNLAND 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLNLQISARFLNIISP 179
                +      +  L+ I    GRI I D+ S     +        L  S    +  + 
Sbjct: 148 DNKDANAKSSAWSFRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGNA 207

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGN 237
                       +  G ++ +    K         + +     +Q    +    +   G 
Sbjct: 208 DKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGMLALRGEGTPFPVQADFRSGNTRVAFDGV 267

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNF--KISDGNVRISRYKL 290
           +    K          +GD    L                 G    KI  G   +  Y+ 
Sbjct: 268 VNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKIDTGKSSVFDYRG 327

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-DLNETDFFEEEEK--KNKNDDLK 347
            +     S    +    +      L       +    DL      +  +   K+K  + K
Sbjct: 328 FNGRIGDSDIHGSLVYTTGKPRPKLAGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQK 387

Query: 348 KDDIQYSVNKKEEKDNSHDKE 368
           K +       K    +  + +
Sbjct: 388 KGEKSVQPAGKVLPYDRFETD 408


>gi|157149126|ref|YP_001456445.1| hypothetical protein CKO_04965 [Citrobacter koseri ATCC BAA-895]
 gi|157086331|gb|ABV16009.1| hypothetical protein CKO_04965 [Citrobacter koseri ATCC BAA-895]
          Length = 685

 Score =  116 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 43/384 (11%), Positives = 101/384 (26%), Gaps = 45/384 (11%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +DI +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDIILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKNNNWTFTLAAD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    GRI I D+ S     +    L     F  +    S +
Sbjct: 148 EKNDPNAQPSAWSFRLDTILFDQGRIAIDDKVSKADIEILVDPLGKPLPFSEVTGAKSNN 207

Query: 184 SIKGS---VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
                      +  G ++ +              +++     +Q    +    +   G +
Sbjct: 208 DNNVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSEGAPFPVQADFRSGNTRVAFAGVV 267

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRY 288
                          +GD    L                  RL         +V     +
Sbjct: 268 NDPLNMGGVDLQLKFSGDSLGELYDLTGVLLPDTPPFETDGRLVAKIDTETSSVFDYRNF 327

Query: 289 KLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFF--EEEEKKNKND 344
             +    +           +       L       +    DL         +  +++K  
Sbjct: 328 NGRIGDSD----IHGSLAYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGAQQSKRA 383

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKE 368
           +  K +       K    +  + +
Sbjct: 384 EQSKGEKSIQPADKVLPYDRFETD 407


>gi|67458945|ref|YP_246569.1| Outer membrane assembly protein [Rickettsia felis URRWXCal2]
 gi|67004478|gb|AAY61404.1| Outer membrane assembly protein [Rickettsia felis URRWXCal2]
          Length = 841

 Score =  116 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 53/379 (13%), Positives = 132/379 (34%), Gaps = 30/379 (7%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED--GSFESKIEGLS 87
            +++     +      K + + G IK+ +LP P+V   +I++   +         +E   
Sbjct: 38  NNYKGVIIDKVKEATNKDLTINGDIKLSLLPNPAVSLSEIKLSSIDGTKEPHLISVENAK 97

Query: 88  MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI--------- 138
              +  PL  G I V  + + +P +N  + + G  NW     T +    +          
Sbjct: 98  ASLKLFPLFRGAIEVASIELQKPIINLEVLNNGQKNWQFATPTSNNNPKINNVSSAESTN 157

Query: 139 ----------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188
                     +    +  G++  I++ S++++   +L+ +I +    I   L++ +++  
Sbjct: 158 ANSELEFPILISHFKIIDGKVIYIEKNSEKIFNDINLDTKIKSLKGPIDFTLALKALEQQ 217

Query: 189 VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248
           +  +G      K        N  ++   I  K      ++    ++ GN           
Sbjct: 218 INIDGNIEKIGKIIPLSANINLASEKIKIEGKFDSENNSFIGNANIKGNTKALGVPADLQ 277

Query: 249 GVFSVAGD-FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
             + +     +   N+ +   +        +++ N  I R  L+S +  +  +   +   
Sbjct: 278 NDYELTTAITADNKNITIKDARLNYPNIELLANANYDIERNNLKSNIIVNPGNIITEISS 337

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS-------VNKKEE 360
           + D+ N++    +  + + D  +    +     N+  +L  + I  S       +N    
Sbjct: 338 NLDKTNIM-LQADSLKPILDALKLKTDKLPPIINQKLNLTSNVISNSQTIKLQNINLSAA 396

Query: 361 KDNSHDKENQENFSGDKMI 379
             N       +N + D  I
Sbjct: 397 NSNLTGDIEFKNLAQDITI 415


>gi|34580602|ref|ZP_00142082.1| outer membrane assembly protein [Rickettsia sibirica 246]
 gi|28261987|gb|EAA25491.1| outer membrane assembly protein [Rickettsia sibirica 246]
          Length = 830

 Score =  116 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 55/383 (14%), Positives = 129/383 (33%), Gaps = 28/383 (7%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFES 81
           P FI   +++     +      + + + G IK+ +LP P++   +I++            
Sbjct: 23  PFFIPLNNYKGIVIDKVKEATNRDLTINGDIKLSLLPNPAISLSEIKLSSINGTKEPHLV 82

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-------- 133
            +EG        PL  G I V  + + +P +N  + S G  NW                 
Sbjct: 83  SVEGAKASLRLFPLFRGAIEVASIKLQKPIINLEVLSNGQKNWQFSTPNNTSKTNELSSV 142

Query: 134 ---------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
                       +++    +  G +  I++ S++++   +L  +I +    I   L++ +
Sbjct: 143 ESTDTKTELALPILISHFKIIDGTVIYIEKNSEKIFNDINLETKIKSLKGPIDLTLALKA 202

Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
           ++  +  +G      K        N   +   I  K      ++    ++ GN       
Sbjct: 203 LEQQINIDGNIAEIGKIIPLSANINLAGEKIKIEGKFDSENNSFIGNANIKGNTKTLGMP 262

Query: 245 PIYSGVFSVAGD-FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
                 + +     +   N+ +   +        +++ N  I R  L+S +  +  +   
Sbjct: 263 ADLQNDYELTTAITADSKNIAIKDARLNYPNIELLANANYDIERNNLKSNIIINPGNIIT 322

Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS-------VN 356
           +   + D+ N++    +  + + D  +    +     N+   L  + I  S       +N
Sbjct: 323 EISSNLDKTNIM-LQADSLKPILDALKLKTDKLPPIINQKLILTSNVISNSQAIKLQNIN 381

Query: 357 KKEEKDNSHDKENQENFSGDKMI 379
                 N       +N + D  I
Sbjct: 382 LSAANSNLTGDIELKNLAQDITI 404


>gi|209520574|ref|ZP_03269330.1| putative transmembrane protein, AsmA-like protein [Burkholderia sp.
           H160]
 gi|209499011|gb|EDZ99110.1| putative transmembrane protein, AsmA-like protein [Burkholderia sp.
           H160]
          Length = 216

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 76/200 (38%), Gaps = 26/200 (13%)

Query: 3   RRVLIGLGFLF---SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI--- 56
           RR+ I   +L     +++V      L  DW   R   + + +  +G+  A+ G +K+   
Sbjct: 9   RRIGIIFAWLLATLVILIVALVIFILTFDWNRARPYIDGKVSQAIGRPFAINGDLKVGWR 68

Query: 57  ---------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDM 105
                      +P+P     +I I   +       + ++ +    + LPLL+ +I +  +
Sbjct: 69  HPVGETGWRSWVPWPRFSAVNITIGNPDWTRQPQFATLDEIGFEVKALPLLAHDIVIPAI 128

Query: 106 YIDQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            +  P ++    + G +NW  +  +        + L  I    G + + DQ+        
Sbjct: 129 DLVNPSVDLERLADGRNNWTFKLPSSSGPSEWTLDLHDIGFAKGNLALSDQQKK------ 182

Query: 164 DLNLQISARFLNIISPLSID 183
            ++LQ+    L    PL   
Sbjct: 183 -IDLQMVVDTLGQPIPLGDA 201


>gi|70733863|ref|YP_257503.1| AsmA family protein [Pseudomonas fluorescens Pf-5]
 gi|68348162|gb|AAY95768.1| AsmA family superfamily [Pseudomonas fluorescens Pf-5]
          Length = 741

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 45/349 (12%), Positives = 107/349 (30%), Gaps = 43/349 (12%)

Query: 18  VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KED 76
              F +    D  D++++  + A      ++ + G I   + P+  +   D  +      
Sbjct: 21  ALGFALTHLFDPNDYKDEIRQIARDKAHIELTLNGDIGWSLFPWLGLELHDAGVATLANP 80

Query: 77  GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW------------ 124
               + ++ L +    LPLL  E+++ D+ ++  +L    +  G  NW            
Sbjct: 81  SQPFADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLRLTRNKDGHGNWQDIGKAAPTDKQ 140

Query: 125 --------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
                                     + ++ + V   R++  D+++D+ +    + L   
Sbjct: 141 AETPAASTGEASQPPAGADKPAQPIRLDIDSLTVNNARVEYNDEQTDKQFTAESIQLSTG 200

Query: 171 ARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAFKI---TANFPAKNKAISL 219
                  +P+ + +   S            G   FD     ++      +  A    +  
Sbjct: 201 PIHEATNTPVKLTAFLASSQPAVRVRTELNGELRFDRALQRYQFEDMRLSGEAAGDPLQG 260

Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
           K   F     +++D   N+       +        G     L +    K  ++SG   I+
Sbjct: 261 KTLTFAAQGQLLLDQAANVAQWTGLKVSLNQLRALG----ELKVNDLDKTPQISGGISIA 316

Query: 280 DGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
             ++ R      Q++             VS+ +    + +        D
Sbjct: 317 QFDLARFVDSIGQTLPAMGEGSLSKVELVSRLQGTPTSLALEDLNLKLD 365


>gi|148555348|ref|YP_001262930.1| AsmA family protein [Sphingomonas wittichii RW1]
 gi|148500538|gb|ABQ68792.1| AsmA family protein [Sphingomonas wittichii RW1]
          Length = 710

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 53/388 (13%), Positives = 115/388 (29%), Gaps = 32/388 (8%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTD----FREDFERQATLIVGKKIAVKGGIKIHI-LPF 61
           +  GF     ++G   +  F+ +       +  FE  A+    +++ V G  + +  +  
Sbjct: 34  LAAGFAVVATVIGLVVLAWFVLYVTKGRFLKPTFESVASRTTERQVKVAGDFQFYFDIID 93

Query: 62  PSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                  + I   +        +   ++ R + +PL+ GE +   + +D   ++    ++
Sbjct: 94  ARFLADGLTISNPKWTTRPHFFEARHVAARIKTIPLIFGERKADWLVLDGARVDAEWDAR 153

Query: 120 GVSNWF--QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
             ++W         +      + +  V   +++ ID             LQ+        
Sbjct: 154 KRNSWTFGDPNRKGEPFRWPTIARARVTDSQVRYIDPA-----------LQLRTDVKVGD 202

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI-SLKIQLFPLAYPIIIDLFG 236
                  I G V   GTG    K    +     P    A    +  +   + P  +DL G
Sbjct: 203 IAAGDARIAGKVPFTGTGTLRGKPFTMEGALLSPNSTVAFGRTRFAMHARSGPTRLDLDG 262

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYKLQ 291
            L    +         V G   +LL   L            +     + G  R +R   +
Sbjct: 263 VLPAATQIEGSDLNLKVRGPNIRLLFDFLGVAAPDTRAYWFTSKLTKAGGEWRFTRINGR 322

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNET-DFFEEEEKKNKNDDLKKDD 350
               +       +  +S   + L         +  D+ +   F   E +      ++   
Sbjct: 323 YGASD----LHGRMTISLPGDRLF-LDAVLDSNRVDIIDVGPFIGYEPEALAAKGVQAAV 377

Query: 351 IQYSVNKKEEKDNSHDKENQENFSGDKM 378
            Q     +   D     +   NF    +
Sbjct: 378 AQTGSTPRILPDAPLRIDAIRNFDAHIL 405


>gi|167623798|ref|YP_001674092.1| AsmA family protein [Shewanella halifaxensis HAW-EB4]
 gi|167353820|gb|ABZ76433.1| AsmA family protein [Shewanella halifaxensis HAW-EB4]
          Length = 611

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/382 (11%), Positives = 104/382 (27%), Gaps = 60/382 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +      +  +VL     V L  D  DF+           G+++A+   +     P 
Sbjct: 5   MKFLKWFFISILGLVLALVLYVTLIFDPNDFKPQIIDLVKKETGRELAIGSDLSWTFFPS 64

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    I +   +         +  +      +PLL  E+ +  + +D   L F     
Sbjct: 65  LGIKLGQITLSNPDGFQNPSMLAVNQVVAEVALMPLLKKEVEISQLNLDGLTLMFETQKN 124

Query: 120 GVSNW----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
           G +++                  + +T   +  + +  I +   +I  ID  +      +
Sbjct: 125 GRTSFDGLTGKAGKKDNTDKSAAKATTGTSLARLDIGGIAITNTKIINIDHANQTEQVFA 184

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
              L +    L   +PL                    +     T            ++++
Sbjct: 185 LKELTLGRFQLGEFAPL--------------------KYELSATLPDMTLVSQGEGQLKV 224

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
                 I I+             ++    V G       L+        S    +    +
Sbjct: 225 AQDLNTITIN------------DFAVSNQVTGAGLPHGKLKADL---NTSLVIALDKQTL 269

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMHD--LNETDFFEEEEKK 340
            +      +    ++ +      V+   +   +       +   D  L + +  + +  K
Sbjct: 270 NLVLSSFNA----ANINASGSLDVAYGHKVPSVVAKLEVGDVDLDALLPKDETKQAKGAK 325

Query: 341 NKNDDLKKDDIQYSVNKKEEKD 362
             N   K  +   +  K    D
Sbjct: 326 APNTSSKAVEPDLTAMKSVNLD 347


>gi|153947448|ref|YP_001403002.1| AsmA family protein [Yersinia pseudotuberculosis IP 31758]
 gi|152958943|gb|ABS46404.1| AsmA family protein [Yersinia pseudotuberculosis IP 31758]
          Length = 745

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/426 (11%), Positives = 108/426 (25%), Gaps = 107/426 (25%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------ 57
           +VL+G+     + LV A       DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGE 65

Query: 58  ------ILPFPSVFFKDIRIDQ-------------------------KEDGSFESKIEGL 86
                  +P+P +  +D+ +                                    ++ +
Sbjct: 66  GPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEGEMVTLKRI 125

Query: 87  SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---RKSTMDMIHNVILEKIH 143
                 L LL+ E+R+  +++ QP ++    + G +NW       ST     +V +  I 
Sbjct: 126 DASIAPLSLLNKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSSSWSVDIGDII 185

Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI------------- 190
              G I + D    Q   L+ ++    A     ++ +   +   SV              
Sbjct: 186 FDRGEITLKDAIL-QADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSANTTTSSVT 244

Query: 191 --------------------------------------AEGTGNFDNKRSAFKITANFPA 212
                                                  +  G +  +            
Sbjct: 245 TTSVVTTTATATTNPVTETETETETETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMI 304

Query: 213 K--NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270
              +  +   +Q         + + G L              ++G     L   L     
Sbjct: 305 SMNDANVPFPLQADMRYGSTQVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLP 364

Query: 271 R---------LSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320
                     LS   K + G V     +  +    +   D              L    +
Sbjct: 365 ATPPYQTEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLT---YTDSQPRPKLAGQVD 421

Query: 321 GAESMH 326
             +   
Sbjct: 422 SEKLRF 427


>gi|15600339|ref|NP_253833.1| hypothetical protein PA5146 [Pseudomonas aeruginosa PAO1]
 gi|9951446|gb|AAG08531.1|AE004927_9 hypothetical protein PA5146 [Pseudomonas aeruginosa PAO1]
          Length = 750

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 114/359 (31%), Gaps = 52/359 (14%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFE 80
            +    D  D++++  + A      ++ +KG I   + P+  +   D  I          
Sbjct: 25  ALTHLFDPNDYKDEIRQIARDKANLELDLKGDIGWSLFPWLGLELHDTSIASAATPTKPF 84

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW---------------- 124
           + ++ L +    LPLL  ++++  + ++   L+     +G  NW                
Sbjct: 85  ADLQMLGLSVRVLPLLRKDVQMSAIRVEGLSLDLVRDKQGKGNWENIGKPAQPQAPAAPS 144

Query: 125 ------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
                               +  +      + ++ ++V   R+   D+ S + Y +  + 
Sbjct: 145 ETPPAADGKGAQAQAPEQAPQNDSPRTPIKLDIDSLNVNNARVTYTDEASGKQYNVEGIE 204

Query: 167 LQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNK 215
           L   A       PL +++  G+            G   FD     +       +  A  +
Sbjct: 205 LSTGAIREGSSIPLKLNAYLGTNQPVVRVKTELTGNLRFDTALRRYQLEDARLSGEASGE 264

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
            +  K   F     +++D    +       +        G     L      K ++ SG 
Sbjct: 265 PLQGKTATFSAQGQLLLDQSAQIAEWNGLKLSVNQLRALG----ELKARELDKDTKFSGG 320

Query: 276 FKISDGNVR-ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
             I+  N+R        ++   +  +   K +++       N S N  +    L++T F
Sbjct: 321 LSIAPMNLREFLAGIGVTLPAMADANTLGKFELNTRLAGSRN-SLNLEDLKLGLDDTAF 378


>gi|218894246|ref|YP_002443115.1| Putative outer membrane biogenesis protein [Pseudomonas aeruginosa
           LESB58]
 gi|218774474|emb|CAW30291.1| Putative outer membrane biogenesis protein [Pseudomonas aeruginosa
           LESB58]
          Length = 750

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 114/359 (31%), Gaps = 52/359 (14%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFE 80
            +    D  D++++  + A      ++ +KG I   + P+  +   D  I          
Sbjct: 25  ALTHLFDPNDYKDEIRQIARDKANLELDLKGDIGWSLFPWLGLELHDTSIASAATPTKPF 84

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW---------------- 124
           + ++ L +    LPLL  ++++  + ++   L+     +G  NW                
Sbjct: 85  ADLQMLGLSVRVLPLLRKDVQMSAIRVEGLSLDLVRDKQGKGNWENIGKPAQPQAPAAPS 144

Query: 125 ------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
                               +  +      + ++ ++V   R+   D+ S + Y +  + 
Sbjct: 145 ATPPAADGKGGQAQAPEQAPQNDSPRTPIKLDIDSLNVNNARVTYTDEASGKQYNVEGIE 204

Query: 167 LQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNK 215
           L   A       PL +++  G+            G   FD     +       +  A  +
Sbjct: 205 LSTGAIREGSSIPLKLNAYLGTNQPVVRVKTELTGNLRFDTALRRYQLEDARLSGEASGE 264

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
            +  K   F     +++D    +       +        G     L      K ++ SG 
Sbjct: 265 PLQGKTATFSAQGQLLLDQSAQIAEWNGLKLSVNQLRALG----ELKARELDKDTKFSGG 320

Query: 276 FKISDGNVR-ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
             I+  N+R        ++   +  +   K +++       N S N  +    L++T F
Sbjct: 321 LSIAPMNLREFLAGIGVTLPAMADANTLGKFELNTRLAGSRN-SLNLEDLKLGLDDTAF 378


>gi|254243973|ref|ZP_04937295.1| hypothetical protein PA2G_04803 [Pseudomonas aeruginosa 2192]
 gi|126197351|gb|EAZ61414.1| hypothetical protein PA2G_04803 [Pseudomonas aeruginosa 2192]
          Length = 750

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 114/359 (31%), Gaps = 52/359 (14%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFE 80
            +    D  D++++  + A      ++ +KG I   + P+  +   D  I          
Sbjct: 25  ALTHLFDPNDYKDEIRQIARDKANLELDLKGDIGWSLFPWLGLELHDTSIASAATPTKPF 84

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW---------------- 124
           + ++ L +    LPLL  ++++  + ++   L+     +G  NW                
Sbjct: 85  ADLQMLGLSVRVLPLLRKDVQMSAIRVEGLSLDLVRDKQGKGNWENIGKPAQPQAPAAPS 144

Query: 125 ------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
                               +  +      + ++ ++V   R+   D+ S + Y +  + 
Sbjct: 145 ATPPAADGKGAQAQAPEQAPQNDSPRTPIKLDIDSLNVNNARVTYTDEASGKQYNVEGIE 204

Query: 167 LQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNK 215
           L   A       PL +++  G+            G   FD     +       +  A  +
Sbjct: 205 LSTGAIREGSSIPLKLNAYLGTNQPVVRVKTELTGNLRFDTALRRYQLEDARLSGEASGE 264

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
            +  K   F     +++D    +       +        G     L      K ++ SG 
Sbjct: 265 PLQGKTATFSAQGQLLLDQSAQIAEWNGLKLSVNQLRALG----ELKARELDKDTKFSGG 320

Query: 276 FKISDGNVR-ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
             I+  N+R        ++   +  +   K +++       N S N  +    L++T F
Sbjct: 321 LSIAPMNLREFLAGIGVTLPAMADANTLGKFELNTRLAGSRN-SLNLEDLKLGLDDTAF 378


>gi|322830847|ref|YP_004210874.1| AsmA family protein [Rahnella sp. Y9602]
 gi|321166048|gb|ADW71747.1| AsmA family protein [Rahnella sp. Y9602]
          Length = 684

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/373 (12%), Positives = 103/373 (27%), Gaps = 50/373 (13%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIR 70
                DW   +    ++ +  + +  A++G + +              +P+P +  +DI 
Sbjct: 25  FIATFDWNRLKPTINQKVSTELNRAFAIRGDLGVDWSRQKDEAGWRAWVPWPHIHAEDIV 84

Query: 71  IDQKEDGSF------ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124
           +    D           K+  +      L LL  E+ +  +++ QP  +      G +NW
Sbjct: 85  LGNPSDVQTGEKDAQMVKLARVDASIAPLALLHKEVLIPRIWLKQPDASLLRLDNGKNNW 144

Query: 125 FQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDL--NLQISAR 172
                       +      +  L  I    G+I   D   ++D    +  L   L  +  
Sbjct: 145 TFNLANSDTQDPAQPPSAWSFTLNDIVFDRGQIDYKDAKLKADFRAVIDPLGKPLPFTEV 204

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPI 230
             +        +       +  G ++ +  +           K+  +   +Q    +   
Sbjct: 205 VGDKKDAPKTKTPPYVFGWKVDGKYNGESLSGSGKIGGMLALKDPDVLFPLQADVRSGNT 264

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFKISDG 281
            + + G L               +G     L         +         LS      DG
Sbjct: 265 RVAVAGTLQDPMNLGGLDLRLKFSGQTLSDLYGLTGVLLPQTPPYSTDGHLSATLHDKDG 324

Query: 282 NV-RISRYKLQSILPNSSTDEDNKTKVSQDEE-------NLLNFSENGAESMHDLNETDF 333
            + R   +  +    +       +  V    +         L F++       D N+   
Sbjct: 325 AIYRYQNFNGEIGDSDIHGSLTYQA-VKPRPKLTGEVVSKQLRFADLAPLIGADSNQDKA 383

Query: 334 FEEEEKKNKNDDL 346
              E  +   D +
Sbjct: 384 KRGETTRQPADKV 396


>gi|107104245|ref|ZP_01368163.1| hypothetical protein PaerPA_01005318 [Pseudomonas aeruginosa PACS2]
          Length = 750

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 114/359 (31%), Gaps = 52/359 (14%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFE 80
            +    D  D++++  + A      ++ +KG I   + P+  +   D  I          
Sbjct: 25  ALTHLFDPNDYKDEIRQIARDKANLELDLKGDIGWSLFPWLGLELHDTSIASAATPTKPF 84

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW---------------- 124
           + ++ L +    LPLL  ++++  + ++   L+     +G  NW                
Sbjct: 85  ADLQMLGLSVRVLPLLRKDVQMSAIRVEGLSLDLVRDKQGKGNWENIGKPAQPQAPAAPS 144

Query: 125 ------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
                               +  +      + ++ ++V   R+   D+ S + Y +  + 
Sbjct: 145 ATPPAADGKGAQAQAPEQAPQNDSPRTPIKLDIDSLNVNNARVTYTDEASGKQYNVEGIE 204

Query: 167 LQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNK 215
           L   A       PL +++  G+            G   FD     +       +  A  +
Sbjct: 205 LSTGAIREGSSIPLKLNAYLGTNQPVVRVKTELTGNLRFDTALRRYQLEDARLSGEASGE 264

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
            +  K   F     +++D    +       +        G     L      K ++ SG 
Sbjct: 265 PLQGKTATFSAQGQLLLDQSAQIAEWNGLKLSVNQLRALG----ELKARELDKDTKFSGG 320

Query: 276 FKISDGNVR-ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
             I+  N+R        ++   +  +   K +++       N S N  +    L++T F
Sbjct: 321 LSIAPMNLREFLAGIGVTLPAMADANTLGKFELNTRLAGSRN-SLNLEDLKLGLDDTAF 378


>gi|254238151|ref|ZP_04931474.1| hypothetical protein PACG_04273 [Pseudomonas aeruginosa C3719]
 gi|126170082|gb|EAZ55593.1| hypothetical protein PACG_04273 [Pseudomonas aeruginosa C3719]
          Length = 750

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 114/359 (31%), Gaps = 52/359 (14%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFE 80
            +    D  D++++  + A      ++ +KG I   + P+  +   D  I          
Sbjct: 25  ALTHLFDPNDYKDEIRQIARDKANLELDLKGDIGWSLFPWLGLELHDTSIASAATPTKPF 84

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW---------------- 124
           + ++ L +    LPLL  ++++  + ++   L+     +G  NW                
Sbjct: 85  ADLQMLGLSVRVLPLLRKDVQMSAIRVEGLSLDLVRDKQGKGNWENIGKPAQPQAPAAPS 144

Query: 125 ------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
                               +  +      + ++ ++V   R+   D+ S + Y +  + 
Sbjct: 145 ATPPAADGKGAQAQAPEQAPQNDSPRTPIKLDIDSLNVNNARVTYTDEASGKQYNVEGIE 204

Query: 167 LQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNK 215
           L   A       PL +++  G+            G   FD     +       +  A  +
Sbjct: 205 LSTGAIREGSSIPLKLNAYLGTNQPVVRVKTELTGNLRFDTALRRYQLEDARLSGEASGE 264

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
            +  K   F     +++D    +       +        G     L      K ++ SG 
Sbjct: 265 PLQGKTATFSAQGQLLLDQSAQIAEWNGLKLSVNQLRALG----ELKARELDKDTKFSGG 320

Query: 276 FKISDGNVR-ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
             I+  N+R        ++   +  +   K +++       N S N  +    L++T F
Sbjct: 321 LSIAPMNLREFLAGIGVTLPAMADANTLGKFELNTRLAGSRN-SLNLEDLKLGLDDTAF 378


>gi|296532169|ref|ZP_06894928.1| asmA family protein [Roseomonas cervicalis ATCC 49957]
 gi|296267507|gb|EFH13373.1| asmA family protein [Roseomonas cervicalis ATCC 49957]
          Length = 636

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/345 (14%), Positives = 111/345 (32%), Gaps = 27/345 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LRR+LI  G      ++    + L   W  F    ERQA+  +G+ +A+ G + + +   
Sbjct: 3   LRRILIWTGLP----VLAVLLLVLLWSWAWFIPLLERQASARLGRPVAIGG-LDVDLGRI 57

Query: 62  PSVFFKDIRIDQKEDG---SFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNFYLS 117
             +   D+RI   E        + I  L++R + +  +    I + D+ +++P +    +
Sbjct: 58  TGITLTDLRIANPEGFAEDPPFAAIPRLTLRLDAMEFIRHRRIIIPDIALERPVVTLLAT 117

Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSDLNLQISARFLNI 176
                N+     T         +       G +++     D  +        + A     
Sbjct: 118 GDNRRNYDFPALTAADPDAPPSDTAEAPQLGALRVQAGVVDVRH------APLRADMQVR 171

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF--PAKNKAISLKIQLFPLAYPIIIDL 234
           ++    +  +  + A   G + ++    ++T       ++      + L     P    L
Sbjct: 172 VATEEPEGAEPRLRATAEGRYADQPITAELTGGAVLSLRDAENPWPVTLALANGPTRARL 231

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYK 289
            G L    +    +     +G     L               +SG    + G VR +  +
Sbjct: 232 EGTLQDPLRFAGANLRLRFSGSDMARLTPLTGVPIPATPPYEVSGRLDYAAGAVRFTDIE 291

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334
            +    +       +  V+  +               DL++   F
Sbjct: 292 GKVGRSD----LGGELAVTPRDGQRPLVEATLRSRQVDLDDLAGF 332


>gi|304322134|ref|YP_003855777.1| putative AsmA protein [Parvularcula bermudensis HTCC2503]
 gi|303301036|gb|ADM10635.1| putative AsmA protein [Parvularcula bermudensis HTCC2503]
          Length = 749

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 63/375 (16%), Positives = 134/375 (35%), Gaps = 43/375 (11%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++ +GL  L  V++      P FI  + + E  E  A+  +G+++ ++G  +I +LP 
Sbjct: 1   MKKLFLGLALLIVVLVAVLLIAPFFIPASVYEERIEAAASEQLGRQVTIEGAPRISLLPA 60

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    + +   +       ++++   +  + LPLLS  + +    +D+P +N   S  
Sbjct: 61  -EITVTGLTVANADGYEAAVFAEVDRAQIGVKLLPLLSRRVEITKFDLDRPTINLEASED 119

Query: 120 GVSN------------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
           G +                     D + ++ L  + +  G I     +  Q +   + +L
Sbjct: 120 GGNWAFGRPAADTETEAAPPGEAPDALPDLRLGTVTINKGHISYRTPD-GQTWLAENADL 178

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP---AKNKAISLKIQL- 223
           +           L+++S++  +  EGT     + S    T   P   A+  A  L++ + 
Sbjct: 179 R-----------LTLESLEDPLTIEGTMVVQGEPSRLDATFTTPGRYAREGAADLRLSMT 227

Query: 224 -----FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278
                      +  +L  +   +   P    +F++AG      N     K+ RL G    
Sbjct: 228 VGENHASTEMALSDELSFDGRLDIDFPALRSLFALAGVDLGTAN---GFKRLRLDGPVSG 284

Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE 338
           S   VR       ++  +       K  +  D +     +   A    DL      E E 
Sbjct: 285 SLDGVRFGE--GTALTFDD-ITGTGKLAIMIDGDRP-KATGTVALGTLDLTPYLPPEPEG 340

Query: 339 KKNKNDDLKKDDIQY 353
              +       D  +
Sbjct: 341 FAARRRAETGADADF 355


>gi|291612897|ref|YP_003523054.1| AsmA family protein [Sideroxydans lithotrophicus ES-1]
 gi|291583009|gb|ADE10667.1| AsmA family protein [Sideroxydans lithotrophicus ES-1]
          Length = 752

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/392 (12%), Positives = 122/392 (31%), Gaps = 25/392 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  L  +  + +V       +    D   ++    +       + + + G IK+H  P 
Sbjct: 5   LKYGLWSIAVVVAVAAGMIVYIAATFDPNAYKPQIIQAVKDSKHRTLKLDGDIKLHFFPS 64

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
                  + + + E       ++  S+  + LPLL+ +I V ++ +            G 
Sbjct: 65  IGASLGKVSLSEFESEQEFISVDSASVSLKLLPLLARQIVVDEVDVSGVKAQLVKYKNGK 124

Query: 122 SNWFQR--------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
           +N                   +         +  + V    +   D+ +   Y + DLNL
Sbjct: 125 TNIDDLIGKEEATPAAPTPPAAASGAPMQFDIASVQVAKTDLSYSDEATGASYSVKDLNL 184

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLKIQLFPL 226
           +      +  S +   +   S   +            F +  N         L +Q    
Sbjct: 185 KTGRIANDTPSKIDFSAHLQSSKPKLDIVAQIKTTLTFDLEKNLFQVQG---LDMQANGN 241

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
           A  I  DL      +    + +  +S+          +    K +      + + ++   
Sbjct: 242 ALDIT-DLHVQAGGDASARVATKEYSMKKFTLSASGAKGK-SKDKFEAKLDVPELSLAKD 299

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346
           ++    +  N+  D    + V+  E   +  + +  +    + + +  + +  +     L
Sbjct: 300 KFTGNGVTLNAKLDGAPGSIVAVLELPGIEGNASSFKVSAMVLDAELKQPD--QTFKLKL 357

Query: 347 KKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378
                  + + + ++ N  D     N +GDK+
Sbjct: 358 TSP---VTGSIEAQQFNLSDLTLAVNATGDKL 386


>gi|37525505|ref|NP_928849.1| putative assembly protein [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36784933|emb|CAE13851.1| Protein AsmA precursor [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 610

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/392 (11%), Positives = 116/392 (29%), Gaps = 54/392 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R+L  L  L  V++ G   + + ++  DFR    +Q     G ++ ++ G++ H+ P 
Sbjct: 1   MKRLLTTLIILLVVIITGLAALVMLVNPNDFRAYMVKQVQKKSGYQLVLQDGMRWHVWPK 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +            E + +     PLLS ++ V ++ +    L     S+  
Sbjct: 61  LSIITGRMSLTAPGAAQPTVMAENMRLDVALWPLLSHQLAVKEVMLKGAILRVTPESQSQ 120

Query: 122 SNWFQR---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                                   + + ++ +    + I  ++  +   + D+NL +   
Sbjct: 121 KKGNTPIAPTGSTANPVAKGEGWELDIARVKIAD-SLLIWQRDDHEQLNVRDINLLMERD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
                                    ++         +   ++ A +L   +    YP  +
Sbjct: 180 NQ-----------------------NHISVELSSKVSKNQQDLAFNLNADVDITDYPYRV 216

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD-GNVRISRYKLQ 291
               +             + + G       +  S K   +       +   + +      
Sbjct: 217 AGNIDF----------FDYQLQGAGIPTGGISGSGKVHAVYQKETTDELQTISLQALSFT 266

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEE--KKNKNDDLK 347
           +    + ++     K             +  +   D  +      +E    K+    +  
Sbjct: 267 A----NESELHGSIKAMLGAHADYRIDLSSQKLNLDNLMGWDLLPKEGSEVKRYYRIENS 322

Query: 348 KDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                 +V+   E D S    N  +F+ +  I
Sbjct: 323 SAKPVIAVSSSAEPDYSAAFLN--DFNANVTI 352


>gi|330980636|gb|EGH78739.1| AsmA family protein [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 383

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/375 (10%), Positives = 108/375 (28%), Gaps = 49/375 (13%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   D  +          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120

Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAAASTEAPGETTPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF 204
           D    + +    + L           P+ + +        ++      G    D     +
Sbjct: 181 DARKGRTFMAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGALRMDRVLKRY 240

Query: 205 KI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261
           +      +     + +  K   F     +++DL  N+       + +      G     L
Sbjct: 241 QFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALG----EL 296

Query: 262 NLELSAKKSRLSGNFKISDGNVR--ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319
                 K  ++SG   I+  ++R             +       +             S 
Sbjct: 297 RARDLDKTPQISGGLSIAQLDLRAFFENIGQPLPAMSEGALSKVEMVTRLAGTPT---SL 353

Query: 320 NGAESMHDLNETDFF 334
                   ++++ F 
Sbjct: 354 ALENLNLKVDDSTFT 368


>gi|254488708|ref|ZP_05101913.1| AsmA family protein [Roseobacter sp. GAI101]
 gi|214045577|gb|EEB86215.1| AsmA family protein [Roseobacter sp. GAI101]
          Length = 643

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 28/341 (8%), Positives = 97/341 (28%), Gaps = 26/341 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ ++   G +  +++VG  ++   +      +    Q   + G+ +A+ G + +   P 
Sbjct: 1   MKWIIRLFGLVLLIIVVGIGSL-FLLPADRIAKVAADQLRNLTGRNVAITGDVGLTFWPV 59

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    + +                 ++  + + L+ GEI++ ++    P +       
Sbjct: 60  LGINADGLEVGNASWAKDGAMLSAANAAIGVDAMALIRGEIKITNIEAQSPTIRLEQRRD 119

Query: 120 GVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
           G ++W                +       + ++++++    +   D E   +     ++L
Sbjct: 120 GRASWQFTDAGGDAQIETAPTAPASTPRPLTIQRLNITDATLIY-DAEGSDLVRYEGVDL 178

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
            +        + ++                D     F    N   +     +  +     
Sbjct: 179 SLDWSERAGPAVINAALRPAGERVSVEATID----RFDQFLNGDVRPLQARIDTKGGGAN 234

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-RLSGNFKIS-DGNVRI 285
                 L G +  +           +A   +  ++L     ++  +     ++ D  + I
Sbjct: 235 LTGRAGLAGAVAGDFWIKTSDTGRFLASLGAAGVDLPQGLGRTMDVRAQLTMTPDRRLAI 294

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
                                ++ +    +N   +      
Sbjct: 295 REMTADLG----GNTLRGAADITLNGTPDINAQLSAGALNL 331


>gi|238651046|ref|YP_002916903.1| outer membrane assembly protein [Rickettsia peacockii str. Rustic]
 gi|238625144|gb|ACR47850.1| outer membrane assembly protein [Rickettsia peacockii str. Rustic]
          Length = 830

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 55/383 (14%), Positives = 129/383 (33%), Gaps = 28/383 (7%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFES 81
           P FI   +++     +      + + + G IK+ +LP P++   +I++            
Sbjct: 23  PFFIPLNNYKGIVIDKVKEATNRDLTINGDIKLSLLPNPAISLSEIKLSSINGTKEPHLV 82

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-------- 133
            +EG        PL  G I V  + + +P +N  + S G  NW                 
Sbjct: 83  SVEGAKASLRLFPLFRGAIEVASIELQKPIINLEVLSNGQKNWQFSTPNNASKTNELSSV 142

Query: 134 ---------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
                       +++    +  G++  I++ S++++   +L  +I +    I   L++ +
Sbjct: 143 ESTDTKTELALPILISHFKIIDGKVIYIEKNSEKIFNDINLETKIKSLKGPIDLTLALKA 202

Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
           ++  +  +G      K        N       I  K      ++    ++ GN       
Sbjct: 203 LEQQINIDGNIEEIGKIIPLSANINLAGAKIKIEGKFDSENNSFIGNTNIKGNTKTLGMP 262

Query: 245 PIYSGVFSVAGD-FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
                 + +     +   N+ +   +        +++ N  I R  L+S +  +  +   
Sbjct: 263 ADLQNDYELTTAITADSKNIAIKDARLNYPNIELLANANYDIERNNLKSNIIINPGNIIT 322

Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS-------VN 356
           +   + D+ N++    +  + + D  +    +     N+   L  + I  S       +N
Sbjct: 323 EISSNLDKTNIM-LQADSLKPILDALKLKTDKLPPIINQKLILTSNIISNSQAIKLQNIN 381

Query: 357 KKEEKDNSHDKENQENFSGDKMI 379
                 N       +N + D  I
Sbjct: 382 LSAANSNLTGDIELKNLAQDITI 404


>gi|157964427|ref|YP_001499251.1| Outer membrane assembly protein [Rickettsia massiliae MTU5]
 gi|157844203|gb|ABV84704.1| Outer membrane assembly protein [Rickettsia massiliae MTU5]
          Length = 841

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 55/383 (14%), Positives = 128/383 (33%), Gaps = 28/383 (7%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFES 81
           P FI   +++     +      + + + G IK+ +LP P++   +I++            
Sbjct: 32  PFFIPLNNYKGIVIDKVKEATNRDLTINGDIKLSLLPNPAISLSEIKLSSINGTKEPHLV 91

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-------- 133
            +EG        PL  G I V  + + +P +N  + S G  NW                 
Sbjct: 92  SVEGAKASLRLFPLFRGAIEVASIELQKPIINLEVLSNGQKNWQFSTPNNASKTNEISSV 151

Query: 134 ---------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
                       +++    +  G++  I++ S++++   +L  +I +    I   L++ +
Sbjct: 152 ESTETKTELALPILISHFKIIDGKVIYIEKNSEKIFNDINLETKIKSLKGPIDLTLALKA 211

Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
           ++  +  +G      K        N   +   I  K      ++    ++ GN       
Sbjct: 212 LEQQINIDGNIEEIGKIIPLSTNINLAGEKIKIEGKFDSENNSFIGNANIKGNTKTLGMP 271

Query: 245 PIYSGVFSVAGD-FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
                 + +     +   N+ +   +        ++  N  I R  L+S +  +  +   
Sbjct: 272 ADLQNDYELTTAITANSKNIAIKDARLNYPNIELLAKANYDIERNNLKSNIIINPGNIIT 331

Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS-------VN 356
           +   + D+ N++    +  + + D  +    +     N+   L  + I  S       +N
Sbjct: 332 EISSNLDKTNIM-LQADSLKPILDALKLKTDKLPPIINQKLILTSNVISNSQAIKLQNIN 390

Query: 357 KKEEKDNSHDKENQENFSGDKMI 379
                 N        N + D  I
Sbjct: 391 LSAANSNLTGDIELNNLAQDITI 413


>gi|51473541|ref|YP_067298.1| outer membrane assembly protein AsmA [Rickettsia typhi str.
           Wilmington]
 gi|51459853|gb|AAU03816.1| outer membrane assembly protein AsmA [Rickettsia typhi str.
           Wilmington]
          Length = 831

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/364 (13%), Positives = 127/364 (34%), Gaps = 38/364 (10%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFES 81
           P FI   +++     +      + + + G IK+ +LP P++   DI++            
Sbjct: 23  PFFIPLNNYKGVIIDKVKEATNRNLTINGDIKLSLLPTPAISLSDIKLSSINGTKVPHLV 82

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--------------- 126
            +E +       PL  G I V  + + +P ++  +   G  NW                 
Sbjct: 83  SVEAVKASLRIFPLFRGAIEVALIELQKPIIHLEVLDNGQKNWQLYTSNNNNTINNNETV 142

Query: 127 --RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
               +  ++   +++    +  G++  I++ ++Q++   +L   I +    I   +++++
Sbjct: 143 QSNDTQTELELPILINHFKMIDGKVIYIEKNNEQIFNKINLETNIKSIKGPIDFNIALNA 202

Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
           ++  +  +G      +        N       I  K      ++   +++ GN       
Sbjct: 203 LQQQIHIDGHVQEIGQIIPLSTNINLVGAKIKIDGKFDSKNNSFIGNVNVKGNTKTLGMP 262

Query: 245 PIYSGVFSVA------GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
              +  +++            + +  L+     L     +++ N  I    L+S +  + 
Sbjct: 263 SDLNNDYTLTMSISAYNKNINIKDARLNYPNIEL-----LANANYGIENNNLESNIIVNP 317

Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358
            +   K + + D+ N+L           D  +  F   + K +K   +    + ++ N  
Sbjct: 318 GNIITKIQSNLDKTNIL--------LHADSLKPIFDALKLKTDKLSPIISKKLIFTANVI 369

Query: 359 EEKD 362
            +  
Sbjct: 370 RKPQ 373


>gi|237728840|ref|ZP_04559321.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226909462|gb|EEH95380.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 686

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/339 (11%), Positives = 87/339 (25%), Gaps = 41/339 (12%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW   +    ++ +  + +  A++G + +              +P+P V  +DI +  
Sbjct: 28  TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWSSWVPWPHVHAEDIILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPDVTMVHLPRVEATLAPLALLTKTVWLPWVKLVKPDARLIRLSEKNNNWTFNLAGD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                       +  L+ I    GRI I D+ +     +    L     F  +      +
Sbjct: 148 ENRDPDAPPSAWSFRLDNILFDQGRIAINDKVTKSEIEILVDPLGKPLPFSEVTGAKGKE 207

Query: 184 SIK----GSVIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGN 237
           S           +  G ++ +  +           + +     IQ    +    +   G 
Sbjct: 208 SNARVEDYVFGLKAQGRYNGEPLSGSGKIGGMLALRGEDTPFPIQADFRSGNTRVAFIGT 267

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISR 287
           +               +GD    L                  RL         +V     
Sbjct: 268 INDPMNMGGADLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDPEKSSVFDYRD 327

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
           +  +    +           +     +L       +   
Sbjct: 328 FNGRIGDSDIHGTL---AYTTGKPRPMLKGDVESHQLRL 363


>gi|94969082|ref|YP_591130.1| hypothetical protein Acid345_2055 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551132|gb|ABF41056.1| hypothetical protein Acid345_2055 [Candidatus Koribacter versatilis
           Ellin345]
          Length = 587

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 60/372 (16%), Positives = 122/372 (32%), Gaps = 23/372 (6%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M +RVL   G +  V+LV    +PLF++   FR   E   +  +G+++ + G + + I  
Sbjct: 52  MNKRVLKIAGIVVGVILVILIAIPLFVNVETFRPKIEASLSEALGREVKL-GKMSLSIFS 110

Query: 61  FPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLS 117
             S+   +I I      S       + L +  E    + S +I+V    +++P +    +
Sbjct: 111 G-SLSVDNISIADDPAFSKAPFVSAKSLKIGVELGALIFSKQIKVTGFKLEKPEIMLLSA 169

Query: 118 SKGVSNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNL 167
             G  N+            +++     +V +  + +  G++ +     S +      L++
Sbjct: 170 PNGTWNFSTLGAKNAPKTSQASSGAPSDVTIAHLSIDDGKLTVAKANSSAKAQVFDKLDV 229

Query: 168 QISARFLNIISPLSIDS-IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP- 225
           +++   +    P  +   + G   A+ TG              F AK K   L +     
Sbjct: 230 KVNDFSMASQFPFEVSVDLPGGGDAKITGKAGPVNQQDAAKTPFDAKLKVNKLDVAASGF 289

Query: 226 ----LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281
                    I+ L G L  N  Q   +G  ++A           + K   L         
Sbjct: 290 VDASTGIGGIVGLEGTLSSNGTQAKGAGEVTMAKAKLSPKGTP-APKDITLKYALTADLE 348

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341
               +  +    +  +S         +  +   LN + N      D  E           
Sbjct: 349 KQSGNVSQGDIGIGKASARLTG-VYSTHGDVQSLNMNLNAPNMPVDELEAFLPAMGVTLP 407

Query: 342 KNDDLKKDDIQY 353
               L+   +  
Sbjct: 408 SGSKLEGGTLSA 419


>gi|304393141|ref|ZP_07375069.1| AsmA family protein [Ahrensia sp. R2A130]
 gi|303294148|gb|EFL88520.1| AsmA family protein [Ahrensia sp. R2A130]
          Length = 627

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/379 (13%), Positives = 113/379 (29%), Gaps = 21/379 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + L         ++V     P  +     +     Q + ++G  + + G  ++ + P+
Sbjct: 29  MNKWLKIAIGFCLFIVVAVVAAPKLLSTPTVKARVAAQLSDVLGLPVQLNGSSQVSLRPY 88

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             V + D+ I Q  D      ++ L  +      L G+ R+ ++ + +P L      +G 
Sbjct: 89  LGVSWSDVVIGQNSDAMPLLTMDRLDAKLTLSAALFGDARLSELTLVRPVLRLVRDGQGT 148

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            NW      +            V  GR+ I+D  + Q     D   + S +   +   + 
Sbjct: 149 GNWQAADGQLGQ-WFAGKNTGSVALGRLMIVDGIALQ----DDATTRTSRKLTGLQGEVV 203

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL-KIQLFPLAYPIIIDLFGNLFW 240
                 +  A     ++ +        + P   +      +     A P  +   G +  
Sbjct: 204 WSRTSSAASANFGAIWNGEPFRITAQIDDPNAMRDGKASDVAFTLSANPAQLSFNGEMVR 263

Query: 241 N--EKQPIYSGVFSVAGDFSKLLNLELSAKKSRL--------SGNFKISDGNVRIS---- 286
              E    +SG  ++               ++ L        SG   I+     ++    
Sbjct: 264 PGAENDTRFSGNLAMETTSIIRFREWFGLPRTALDIIGPARVSGQLDINGTRADLADASV 323

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEE-EEKKNKNDD 345
               Q+     +   + +           N        + D    D F      K+ + D
Sbjct: 324 DIDGQTGNGQLNFQWNREGAALLSGTLGFNQVAFPNPMIVDKPWADLFGHPHGAKHIDLD 383

Query: 346 LKKDDIQYSVNKKEEKDNS 364
           L+      ++      D +
Sbjct: 384 LRISAASATIGNAPVSDIA 402


>gi|256821712|ref|YP_003145675.1| AsmA family protein [Kangiella koreensis DSM 16069]
 gi|256795251|gb|ACV25907.1| AsmA family protein [Kangiella koreensis DSM 16069]
          Length = 615

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 57/424 (13%), Positives = 133/424 (31%), Gaps = 53/424 (12%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +L+     +  + ++ +V A  + +F +    +    +Q     G ++ +K  + +   P
Sbjct: 4   LLKWSFRLVIAVVALFIVAAVALMIFFNSDQLKTTLTKQVNERTGAELVIKQDLSLSFFP 63

Query: 61  FPSVFFKDIRIDQKEDGS---FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
           + ++   DI + Q            I  +S   + +PL SG+I V  + +    LN    
Sbjct: 64  WLAIETGDISLSQPPAFPQTDPALTIGAVSASIKLMPLFSGDIEVGAVTVSDATLNMTSG 123

Query: 118 SKGVSNWF--------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            +G SN                 ++++     ++ L+K+ +    +   D  + Q   ++
Sbjct: 124 PQGKSNLQAFTEALQKAETADTAKEASDAKALDLSLQKLELNNFTVNQFDTTNKQSQSIT 183

Query: 164 DLNLQISARFLNIISPLSIDSI--------KGSVIAEGTGNFDNKRSAFKITANFPAKNK 215
                I         P++                  EG     +      +     + + 
Sbjct: 184 LDQFIIQDFRPGEFRPVNASGKISTEVNKPAIEWALEGDLKVSSDFKQINVQKLDASVDN 243

Query: 216 --------AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY------------SGVFSVAG 255
                    ++  + +       +I+  G +  +++   +                +   
Sbjct: 244 VSSTVQTVGLTGTLSVAMGGKSTLIEHQGAVTLDDQSVTFKASAGLGDMNDIKVSMNADS 303

Query: 256 DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315
               LL      K++   G    S     + + ++Q  L   S +  N  + +Q   N+ 
Sbjct: 304 LTLDLLMATSGKKETTAKGEADFSPVADFLKKSRIQGDLTVGSLNLKNT-RFTQVSANIF 362

Query: 316 NFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV----NKKEEKDNSHDKENQE 371
           N    GA    D  +   F+ E     + D     +  ++    N  +  D        E
Sbjct: 363 N---KGATLHLDPFKAQAFQGELATTASVDFASKPLALAIQPDLNNIQIGDLLAAFFGFE 419

Query: 372 NFSG 375
             SG
Sbjct: 420 RLSG 423


>gi|258542433|ref|YP_003187866.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256633511|dbj|BAH99486.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636570|dbj|BAI02539.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639623|dbj|BAI05585.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642679|dbj|BAI08634.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645734|dbj|BAI11682.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648787|dbj|BAI14728.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651840|dbj|BAI17774.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654831|dbj|BAI20758.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 715

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/367 (12%), Positives = 114/367 (31%), Gaps = 32/367 (8%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64
           VL+G G     V++       F  W  F      +AT I+ +K  ++  + + +    ++
Sbjct: 15  VLVGFGSFLLAVILLIV----FWSWDWFVPLVNSRATAILHRKTTIE-HLHVALGRVTTI 69

Query: 65  FFKDIRIDQKEDGSF----ESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYLSSK 119
             +++RI+Q +  +      ++ + L++  +    L    + +  + +  P  + +    
Sbjct: 70  RVENLRIEQPQTFAQEKSLFAESKELAVSVDVWSYLWHRALHIPLIALTDPKADIFARKN 129

Query: 120 GVSNW---FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
           G +N+      K                  G ++I D      Y     ++Q+      +
Sbjct: 130 GENNYTFTADGKPAPTDKKKTDQASNLPDIGELRITDGALHVRYDPLQADMQM-----GV 184

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN--KAISLKIQLFPLAYPIIIDL 234
            +     + +G++     G +  +    +                 + LF    P    L
Sbjct: 185 ETTPPEGNNRGTLRLTAKGRYAQQPITARFVGGTVLSFVADKEPYPVDLFVQNGPTTATL 244

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYK 289
            G++               AG    LL         R     ++G    +  +V    ++
Sbjct: 245 KGDVVHPLTLGGARLKLHFAGPDMSLLYPLTGVPIPRTPAYSITGALDYTREHVVFKDFE 304

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLL-NFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
            +    +         +V+  E+ +      +  +      +   F   +      + K 
Sbjct: 305 GKMGTSD----IGGTIEVNPHEKPIFVQADLHSKQVNLV--DLGGFIGAKPDKTKAEEKA 358

Query: 349 DDIQYSV 355
           +    +V
Sbjct: 359 EAKSNTV 365


>gi|116054460|ref|YP_793618.1| hypothetical protein PA14_67975 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115589681|gb|ABJ15696.1| Putative outer membrane biogenesis protein [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 750

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 114/359 (31%), Gaps = 52/359 (14%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFE 80
            +    D  D++++  + A      ++ +KG I   + P+  +   D  I          
Sbjct: 25  ALTHLFDPNDYKDEIRQIARDKANLELDLKGDIGWSLFPWLGLELHDTSIASTATPTKPF 84

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW---------------- 124
           + ++ L +    LPLL  ++++  + ++   L+     +G  NW                
Sbjct: 85  ADLQMLGLSVRVLPLLRKDVQMSAIRVEGLSLDLVRDKQGKGNWENIGKPAQPQAPSAPS 144

Query: 125 ------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
                               +  +      + ++ ++V   R+   D+ S + Y +  + 
Sbjct: 145 ATPPAADGKGAQAQAPEQAPQNDSPRTPIKLDIDSLNVNNARVTYTDEASGKQYNVEGIE 204

Query: 167 LQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNK 215
           L   A       PL +++  G+            G   FD     +       +  A  +
Sbjct: 205 LSTGAIREGSSIPLKLNAYLGTNQPVVRVKTELTGNLRFDTALRRYQLEDARLSGEASGE 264

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
            +  K   F     +++D    +       +        G     L      K ++ SG 
Sbjct: 265 PLQGKTATFSAQGQLLLDQSAQIAEWNGLKLSVNQLRALG----ELKARELDKDAKFSGG 320

Query: 276 FKISDGNVR-ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
             I+  N+R        ++   +  +   K +++       N S N  +    L++T F
Sbjct: 321 LSIAPMNLREFLAGIGVTLPAMADANTLGKFELNTRLAGSRN-SLNLEDLKLGLDDTAF 378


>gi|296391998|ref|ZP_06881473.1| AsmA family protein [Pseudomonas aeruginosa PAb1]
 gi|313110188|ref|ZP_07796086.1| Putative outer membrane biogenesis protein [Pseudomonas aeruginosa
           39016]
 gi|310882588|gb|EFQ41182.1| Putative outer membrane biogenesis protein [Pseudomonas aeruginosa
           39016]
          Length = 750

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 114/359 (31%), Gaps = 52/359 (14%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFE 80
            +    D  D++++  + A      ++ +KG I   + P+  +   D  I          
Sbjct: 25  ALTHLFDPNDYKDEIRQIARDKANLELDLKGDIGWSLFPWLGLELHDTSIASTATPTKPF 84

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW---------------- 124
           + ++ L +    LPLL  ++++  + ++   L+     +G  NW                
Sbjct: 85  ADLQMLGLSVRVLPLLRKDVQMSAIRVEGLSLDLVRDKQGKGNWENIGKPAQPQAPSAPS 144

Query: 125 ------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
                               +  +      + ++ ++V   R+   D+ S + Y +  + 
Sbjct: 145 ATPPAADGKGAQAQAPEQAPQNDSPRTPIKLDIDSLNVNNARVTYTDEASGKQYNVEGIE 204

Query: 167 LQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKRSAF---KITANFPAKNK 215
           L   A       PL +++  G+            G   FD     +       +  A  +
Sbjct: 205 LSTGAIREGSSIPLKLNAYLGTNQPVVRVKTELTGNLRFDTALRRYQLEDARLSGEASGE 264

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
            +  K   F     +++D    +       +        G     L      K ++ SG 
Sbjct: 265 PLQGKTATFSAQGQLLLDQSAQIAEWNGLKLSVNQLRALG----ELKARELDKDAKFSGG 320

Query: 276 FKISDGNVR-ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
             I+  N+R        ++   +  +   K +++       N S N  +    L++T F
Sbjct: 321 LSIAPMNLREFLAGIGVTLPAMADANTLGKFELNTRLAGSRN-SLNLEDLKLGLDDTAF 378


>gi|99080492|ref|YP_612646.1| AsmA [Ruegeria sp. TM1040]
 gi|99036772|gb|ABF63384.1| AsmA [Ruegeria sp. TM1040]
          Length = 646

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 56/392 (14%), Positives = 116/392 (29%), Gaps = 33/392 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R +L  L  +   + VG   +  F+      E   +Q     G+++   G ++    P 
Sbjct: 1   MRLILRILSAIVITIAVGVAIL-TFLPGQKIAELAAQQIEKQTGRQVVFGGDVRFSFWPT 59

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +   D+ +   +            L++  +   L+ G+IR+ ++    PHLN      
Sbjct: 60  LGIQADDVALANADWAGPEPLLTAGRLTIGVDAADLIRGDIRITELTAIVPHLNLETRED 119

Query: 120 GVSNWFQRKSTMDMIH------------NVILEKIHVKGGRIKIIDQESDQVYFLS-DLN 166
           G+ NW      +                +V +E I ++G  ++      D V     DL 
Sbjct: 120 GIGNWVFDAPAVGETPAQVETDAEGEGTSVAIEAITLRGASLRYAAHGQDVVETNQVDLQ 179

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
           L            L++      +   G         +F+        +  +++  +   L
Sbjct: 180 LAWPDPNGTANVDLTLRPAGKPLRIAGEV------GSFRRFLLGEVASLGVTVTAEASKL 233

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-RLSGNFKIS-DGNVR 284
            +    DL G                +       ++L     ++   + +   + DG V 
Sbjct: 234 RFDGQADLSGAFDGRITGASDDTSALLVALGQAAVDLPKGLGRAMTFAADTTYTPDGRVS 293

Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN----ETDFFEEEEKK 340
           +    L                ++      L  +      M DL+     T        +
Sbjct: 294 LRDLSL----ALDHNALRGDADLNLAASP-LKVTAALEGDMLDLSALGAPTTGAGGNTAE 348

Query: 341 NKNDDLKKDDIQYSVNKKEEKDNSHDKENQEN 372
                     I  S+    E D S D +  + 
Sbjct: 349 PATQGWSTTPIDASMLALIEGDISLDVKGLQT 380


>gi|294141162|ref|YP_003557140.1| AsmA family protein [Shewanella violacea DSS12]
 gi|293327631|dbj|BAJ02362.1| AsmA family protein [Shewanella violacea DSS12]
          Length = 614

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 93/307 (30%), Gaps = 20/307 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ V      L  +    A  + L  D  DF+ +         G+ + +   +     P 
Sbjct: 5   MKIVKWFFIVLLLMFASLAAYLTLVFDPNDFKPEIVDAVKKQTGRDLIIAKDLSWTFFPS 64

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +   DI +   +        +++ +    E LPL   ++ +  + +D   +N      
Sbjct: 65  IGIELGDISLSNPKGFDNASMLEVKKIVAEVELLPLFRKQVEIAQLNLDGLVINLETRKD 124

Query: 120 GVSNWFQRKSTMDMIHNVILEK---------------IHVKGGRIKIIDQESDQVYFLSD 164
           G S++   +S      +V L+K               + V   +I+I D+++      S 
Sbjct: 125 GRSSFDGFQSQSTAEQSVQLDKPAVSSASLSSLDIGGVSVTNTQIRISDKQAGTEQVFSL 184

Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
            NL +    L   + L           +            +  AN   K+  I+  I   
Sbjct: 185 DNLTLGKFSLGEFATLEYRFSAEMPDIKLMSLGQGSIKLSQNMANIQVKDFKITNAIAGE 244

Query: 225 PLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF--KISDG 281
            +    + I L   +    +      +             +L         +    +  G
Sbjct: 245 TIPNKKLDITLLTQVEILLETKQVHLLLDKLNAGDIEAKGKLDIAYGHKVPHIIANLDFG 304

Query: 282 NVRISRY 288
           ++ + + 
Sbjct: 305 DIDLDKL 311


>gi|114047736|ref|YP_738286.1| AsmA family protein [Shewanella sp. MR-7]
 gi|113889178|gb|ABI43229.1| AsmA family protein [Shewanella sp. MR-7]
          Length = 606

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/398 (11%), Positives = 112/398 (28%), Gaps = 58/398 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +   +  L ++V+     + +F D  DF+ +         G++  +   +     P 
Sbjct: 1   MKFIKWLIALLVTLVVAVTVYLTVFFDPNDFKPEIVNAVKKQTGREFVIADDLSWTFFPT 60

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    + +   E  +     ++       E +PL S +I +  + +D   +N      
Sbjct: 61  VGINLGGVSLSNPEGFTPKSMLEVNKAVAEVELMPLFSKQIEIAQLSLDGAKINLVTRKN 120

Query: 120 G-------------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
           G                     S    + ++ +  + +    I +ID+   Q   L+   
Sbjct: 121 GSSSLDGLTGNAAEKPATPAEPSAKAQLTSIDVGGVSITNTEINLIDEAKGQTQTLTLKQ 180

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
             + A  L+  +P+S                      F  T      +     +I+L   
Sbjct: 181 FTLGAFSLDKFAPIS--------------------YEFAATMPDMTVSSKGEGQIKLSHD 220

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
              ++I+                   V G+      L     +  ++    +    V   
Sbjct: 221 FNQLVIE------------KLDIETQVEGEGIPNKKLT---AEVSVNSQIALDKKQVSAD 265

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEE-NLLNFSENGAESMHD---LNETDFFEEEEKKNK 342
             KL ++  N+      K  V+   +   +N      +   D          ++      
Sbjct: 266 ISKLTAMDINA----TGKLAVNYGGKVPQINADFQLGDIDLDALLPKSDTAEKQTAATPT 321

Query: 343 NDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMIL 380
                + D+        +   +       N S    ++
Sbjct: 322 QTQAAEPDLTALNGLDAKLTLAVKSIKVANLSTQNWLM 359


>gi|307546608|ref|YP_003899087.1| AsmA protein [Halomonas elongata DSM 2581]
 gi|307218632|emb|CBV43902.1| K07289 AsmA protein [Halomonas elongata DSM 2581]
          Length = 774

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 97/347 (27%), Gaps = 40/347 (11%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +LR +L  +G L  V +     V  F D  D +           G ++ + G +     P
Sbjct: 4   ILRTLLATIGILGLVAVGAVVFVTTFFDPEDLKPRLVEVVREHSGLELELDGPLSWSFYP 63

Query: 61  FPSVFFKDIRIDQK---EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
              V  +           D    +  +   +   F PLL GEI +  + I+   LN    
Sbjct: 64  RLGVAVETAEARLPTQSPDDRPFAAFDHAEVSLAFAPLLRGEIAIDGLTIEGLLLNLARD 123

Query: 118 SKGVSNWFQRKSTMDMIHN---------------------------VILEKIHVKGGRIK 150
             G  NW      ++                               + +  + V  G++ 
Sbjct: 124 ESGRGNWETLIEQLESRGEAAESVLAPASAGPNPDATVDESGLSVALNIASVQVHQGQVN 183

Query: 151 IIDQESDQVYFLSDLNLQISARFLNIISPLSI--------DSIKGSVIAEGTGNFDNKRS 202
             D ++++   L  LN+       +   PL+         D    +           +  
Sbjct: 184 YRDAQAERHVTLEQLNISGRNVNPDRPFPLNASLRVLLDNDLDTEAATLVSDLILKTQVD 243

Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262
                        ++    +L        I+L       +         +     + LL+
Sbjct: 244 LGLAEGRHVLSKLSLQTDSRLGDSQDQQKINLDAAEAILDLGKQ-QLTVTDGQLDTSLLH 302

Query: 263 LELSAKKSRLSGNFKIS-DGNVRISRYKLQSILPNSSTDEDNKTKVS 308
             L  K+  L+  F++  D   + ++ +   +             + 
Sbjct: 303 PRLGEKRLPLAMGFQLDADLQAQTAQLRELHLTGPDGLALTGNLNLD 349


>gi|117920815|ref|YP_870007.1| AsmA protein [Shewanella sp. ANA-3]
 gi|117613147|gb|ABK48601.1| AsmA protein [Shewanella sp. ANA-3]
          Length = 606

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/378 (11%), Positives = 104/378 (27%), Gaps = 58/378 (15%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF-- 79
            + +F D  DF+ +         G+++ +   +     P   +    I +   E  +   
Sbjct: 21  YLTVFFDPNDFKPEIVNSVKKQTGRELVIGDDLSWTFFPTVGINLGGISLSNPEGFTPKA 80

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG-------------VSNWFQ 126
             ++       E +PL S +I +  + +D   +N      G              +    
Sbjct: 81  MLEVNKAVAEVELMPLFSKQIEIAQLSLDGAKINLVTRKNGSSSLDGLTGKGAEKTATPA 140

Query: 127 RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186
             S    + ++ +  + +    I +ID+   Q   L+     + A  L+  +P+      
Sbjct: 141 EPSAKAQLTSIDVGGVSITNTEINLIDEAKGQTQTLTLKQFTLGAFSLDKFAPM------ 194

Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
                            F  T      +     +I+L      ++I+             
Sbjct: 195 --------------AYEFAATLPDMTVSSKGEGQIKLSHDFNQLVIE------------K 228

Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
                 V G+      L     +  L+    +    +     KL ++  N+      K  
Sbjct: 229 LDIETQVEGEGIPNKKLT---AEVSLNSQIALDKKQLSADISKLTAMDINA----AGKLA 281

Query: 307 VSQDEE-NLLNFSENGAESMHD---LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKD 362
           V+   +   +N      +   D          ++           + D+        +  
Sbjct: 282 VNYGGKVPQINADLQVGDIDLDALLPKSDTAEKQAAATPSQTQAVEPDLTALNGLDAKLT 341

Query: 363 NSHDKENQENFSGDKMIL 380
            +       N S    ++
Sbjct: 342 LAVKSIKVANLSTQNWLM 359


>gi|85706247|ref|ZP_01037342.1| AsmA family protein [Roseovarius sp. 217]
 gi|85669411|gb|EAQ24277.1| AsmA family protein [Roseovarius sp. 217]
          Length = 632

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 40/372 (10%), Positives = 86/372 (23%), Gaps = 21/372 (5%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED 76
           L        F+           Q +   G+++ + G   I   P   V    + +   + 
Sbjct: 2   LAIILGALFFLPGERIARIAADQISKATGRQVTMSGDTTISFYPILGVSTGAVEVANADW 61

Query: 77  GS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134
                  + + L +  E   L  G+IR+  +    P +    +S G  NW      +   
Sbjct: 62  SDAGPMLRADSLKIGVEPQALFGGDIRITGLEAVNPEIRLERASDGRVNWELGVEGVAPS 121

Query: 135 HN------------VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                         + L++  + G  +   D  +  V    +++  +     +  +    
Sbjct: 122 GQSGETLATSNRLALTLDRALITGSSLSYTDHTTGTVQAFRNMDFDLRWPDYDGTATFEA 181

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242
              + +      G  D             +   +       F         L G L  + 
Sbjct: 182 VLRQTANPVTLAGQLDQVGQFLDGAVTGLSARLSGPGGSVAFAGRGGAQPQLQGRLDIDL 241

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
                    +  G     L     A     +        ++ +    L S          
Sbjct: 242 G--DTDAFLAALGLDRLELPPGFGASVKGGTDLTLTDALDLSLRNLALNSG----GNAIA 295

Query: 303 NKTKVSQ-DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361
               ++   +   +N   N                    +        D         E 
Sbjct: 296 GAADIALAGDVPRINAQLNAGALDLSRFAGADSTASGSADSGWSTSPIDASALALANGEV 355

Query: 362 DNSHDKENQENF 373
               D  N  + 
Sbjct: 356 ALVADSINLGDL 367


>gi|253990363|ref|YP_003041719.1| assembly protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC
           43949]
 gi|253781813|emb|CAQ84976.1| protein asma [Photorhabdus asymbiotica]
          Length = 610

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 52/399 (13%), Positives = 120/399 (30%), Gaps = 62/399 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R+L  L  L  V++ G   + + ++  DFR    +Q     G  + ++  ++ H+ P 
Sbjct: 1   MKRLLTTLVILLVVIIAGLAALVMLVNPNDFRAYMVKQVQKKSGYHLVMQDSMRWHVWPK 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +   +        E + +  E  PLLS ++ V ++ +    L     SK  
Sbjct: 61  LSIITGRMSLTAPDATQPTVTAENMRLDVELWPLLSHQLAVKEVMLKGAVLQLTPESKSQ 120

Query: 122 SN---------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                                   + +++I +    +   D +      + D+NL +   
Sbjct: 121 KKENVPVAPKGKAVNPVAKGERWKLDIDRIKIADSLLIWQDDD-HSQLNVRDINLLMERN 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             N            SV      N + +  AF ++AN    +    +   +         
Sbjct: 180 NQNY----------ISVELSSKVNKNQQELAFNLSANVDISDYPHRVAGNID-------- 221

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD-GNVRISRYKLQ 291
                          S  + + G       +  S K + +     I +   + +      
Sbjct: 222 ---------------SFDYQLQGVGIPTGGISGSGKVNAVYQEETIDEPQTISLQALNFT 266

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD---------LNETDFFEEEEKKNK 342
           +    + ++     K           + +  +   D          N+ +       +N 
Sbjct: 267 A----NESELYGSIKAMLTTYPDYQINLSSKKLNLDNLVGWDLLAKNDAEVKRHYRIENN 322

Query: 343 NDDLKKDDIQYSVNKKEEK--DNSHDKENQENFSGDKMI 379
           +    K  I  S  ++ +      ++         DK I
Sbjct: 323 SA---KPVIAVSSLEQPDYGAKFLNNFNANVTIDADKFI 358


>gi|90579101|ref|ZP_01234911.1| asmA protein [Vibrio angustum S14]
 gi|90439934|gb|EAS65115.1| asmA protein [Vibrio angustum S14]
          Length = 728

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 45/432 (10%), Positives = 126/432 (29%), Gaps = 70/432 (16%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L  L  +  VV++G   +   ++   F+     Q     G+++ ++G I     P 
Sbjct: 1   MKKLLYVLIGIIIVVVLGITALVTLVNPNQFKAAIAEQVKKQTGRELDIRGDINWRFFPT 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +   +  ++  +        + +   +    LPLLS E+ +  + +D  H+       
Sbjct: 61  LGLSVGETTLNNPQGFAQPNLIQFKQAELSVSVLPLLSHELDIGKVRLDGAHVFVQTLKD 120

Query: 120 GVSNWF------------------------------QRKSTMDMIHNVILEKIHVKGGRI 149
           G SN                                           + L  + +    +
Sbjct: 121 GRSNLDGLTEKSSNKEVNDSTPSKANKDAVVQDKKSTESKVTTQPWKISLAGVELINASV 180

Query: 150 KIIDQESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNF-------- 197
            II+ ++     L+ +N  +       +      +S  + K     +G+           
Sbjct: 181 DIINDKTASNIALNKVNFTLDKLTPNTWTKATFDISGSANKLKFATKGSAELILSSAYQL 240

Query: 198 -DNKRSAFKITA-NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV----- 250
            + K     +TA +   + K   + +  F       ++L  +    E   +  G      
Sbjct: 241 AELKNLDLSLTAQDGKTEIKHAQVTLDHFQYGQWATVNLNIDGQLPELAFVTKGQTQFKL 300

Query: 251 ------FSVAGDFSKLLNLELSAKKSRL------SGNFKISDGNVRISRYKLQSILPNSS 298
                  ++            +  + ++      + ++ ++     +S+  L +      
Sbjct: 301 SSDRNILTLENLSIDNALSGKALPRPKMQVNIKTNASYDLTTKTATLSKLNLNA----DE 356

Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358
                       +  ++ F+ +      D N     ++  + +       D    + + +
Sbjct: 357 LALMGDVSFINRDVPVIRFNLSSDNINVD-NW--LNKQHGQVSSEKTAASDQAANNASTE 413

Query: 359 EEKDNSHDKENQ 370
                     +Q
Sbjct: 414 IAASTPQQTSSQ 425


>gi|154253210|ref|YP_001414034.1| AsmA family protein [Parvibaculum lavamentivorans DS-1]
 gi|154157160|gb|ABS64377.1| AsmA family protein [Parvibaculum lavamentivorans DS-1]
          Length = 587

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 52/351 (14%), Positives = 115/351 (32%), Gaps = 24/351 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R+ L     + ++++ G      F+D   F+   E  A    G+ + ++G + I     
Sbjct: 1   MRKFLR-FVVVLALLVAGGLYALTFVDLGRFKPQIEAAAQDATGRTLKIEGPLNIGFSLV 59

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           P+V  + I     + G        E L ++   LPLL+G + V ++ ++   +      +
Sbjct: 60  PTVVTEKISFQNADWGTRPQMVTAEKLRLQLALLPLLTGNVDVREVTLEGADVYLETDRR 119

Query: 120 GVSNWFQRKSTMDMIHNVILEK---------IHVKGGRIKIIDQESDQVYF--LSDLNLQ 168
           G  NW   ++      +              I ++   I   D ++ +V      +++L 
Sbjct: 120 GRGNWEFGEAGAQPAADESAGGGMSLAGVPQIEIRNLAIAYRDGQTGKVSDGSFEEVSLL 179

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
             A   +++    +   K S  A+  G+      +   +      +    L + +     
Sbjct: 180 DRAGGFHVVVEGIVTGSKVSFSADVEGDMQQATLS-DASLTVAGTSIGGDLALDMRNRP- 237

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
            +   L G  F         G       FS+      +   +    +  ++ G +R  + 
Sbjct: 238 KLTGALSGTAFDVTPFLSGGGEGKGGPVFSRDPLPLDALTVA--DADIDLTLGELRYGKV 295

Query: 289 KLQSILPNSSTD---EDNKTKVSQDEEN-LLNFSENGAE--SMHDLNETDF 333
            L S+                         L  + +G       D+N  +F
Sbjct: 296 SLTSLKLPLKLTGGKLAAPLTAEYRGSPVKLAINADGGANRVNVDVNAANF 346


>gi|94272337|ref|ZP_01292107.1| Uncharacterized protein involved in outer membrane biogenesis-like
           [delta proteobacterium MLMS-1]
 gi|93450161|gb|EAT01479.1| Uncharacterized protein involved in outer membrane biogenesis-like
           [delta proteobacterium MLMS-1]
          Length = 550

 Score =  113 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 98/283 (34%), Gaps = 28/283 (9%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKI 83
           FID    +E          G+++ + G ++  + P   +    I +    D       ++
Sbjct: 49  FIDPNKQKERIAAMVYEQTGRELRIDGELEWGLWPRLRLAGDSITLGNAPDFGPEPFLEL 108

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW------------FQRKSTM 131
           +  S+     PL+  E+R+  + +   HLN   +++G+ NW                 + 
Sbjct: 109 DSFSLAVATWPLIRSEVRLDLVEVSGLHLNLARNAEGIGNWEDLAGEPEPTAKPAAPGSP 168

Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS------- 184
                + L  + ++  R+   D+ S Q   + DLNLQI A  L     + +D        
Sbjct: 169 LPFAALALGGVDIRDLRVDWHDESSGQRAAIYDLNLQIGALSLGEPIEMELDFQAASNQP 228

Query: 185 -IKGSVIAEGTGNFDNKRSAFKIT---ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
            +  S   +GT  +D +   + +    A+       +        L     +D    L  
Sbjct: 229 DLAASGQLQGTLVYDLRGRHYALQPLHASLDLSGPTVPGGQAELTLRGLFELDEKAGLAR 288

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
            +     +G+  + G   ++  L     +    G  +    ++
Sbjct: 289 VDDF-RLAGLGMLVGATMEMEGLHTD--QPGCRGEIQADINDL 328


>gi|152985263|ref|YP_001351202.1| hypothetical protein PSPA7_5883 [Pseudomonas aeruginosa PA7]
 gi|150960421|gb|ABR82446.1| hypothetical protein PSPA7_5883 [Pseudomonas aeruginosa PA7]
          Length = 750

 Score =  113 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 48/359 (13%), Positives = 113/359 (31%), Gaps = 52/359 (14%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KEDGSFE 80
            +    D  D++++  + A      ++ +KG I   + P+  +   D  I          
Sbjct: 25  ALTHLFDPNDYKDEIRQIARDKANLELDLKGDIGWSLFPWLGLELHDTSIASVATPTRPF 84

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW---------------- 124
           + ++ L +    LPLL  ++++  + ++   L+     +G  NW                
Sbjct: 85  ADLQMLGLSVRVLPLLRKDVQMSAIRVEGLSLDLVRDKQGKGNWENIGKPAQPQAPAAPS 144

Query: 125 ------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
                               +  +      + ++ ++V   R+   D+ S + Y +  + 
Sbjct: 145 ATPPAADGKGAQAQAPEQAPQNDSPRPPIKLDIDSLNVNNARVTYTDEASGKQYNVEGIE 204

Query: 167 LQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDNKRSAF---KITANFPAKNK 215
           L   A        L +++        ++      G   FD     +       +  A  +
Sbjct: 205 LSTGAIREGSSIALKLNAYLGTNQPVMRAKTELTGNLRFDTALKRYQLEDARLSGEASGE 264

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
            +  K   F     +++D    +       +        G     L      K ++ SG 
Sbjct: 265 PLQGKTVTFSAQGQLLLDQSAQIAEWNGLKLSVNQLRALG----ELKARELDKDAKFSGG 320

Query: 276 FKISDGNVR-ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
             I+  N+R        ++   +  +   K +++       N S N  +    L++T F
Sbjct: 321 LSIAPMNLREFLAGIGVTLPAMADANTLGKFELNTRLAGSRN-SLNLEDLKLGLDDTAF 378


>gi|62182114|ref|YP_218531.1| hypothetical protein SC3544 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62129747|gb|AAX67450.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|322716602|gb|EFZ08173.1| AsmA [Salmonella enterica subsp. enterica serovar Choleraesuis str.
           A50]
          Length = 686

 Score =  113 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 52/393 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQ 73
             DW+  +    ++ +  + +  A++G + +              +P+P    +DI +  
Sbjct: 28  TFDWSRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHAHAEDIILGN 87

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
             D        +  +      L LL+  + +  + + +P       S+  +NW       
Sbjct: 88  PPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLTQD 147

Query: 127 ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                +      +  L+ I    GRI I D+ S     +  ++        + ++     
Sbjct: 148 KNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGK 206

Query: 184 SIKGS-----VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + K +        +  G ++ +              ++++    +Q    +    +   G
Sbjct: 207 ADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSG 266

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RIS 286
            +    K          +GD    L                  RL         +V    
Sbjct: 267 VVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFDYR 326

Query: 287 RYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESMH-DLNETDFFEEEEKKNKND 344
            +  +    +           +       L       +    DL      +      K+ 
Sbjct: 327 GFNGRIGDSD----IHGSLTYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSG----KDA 378

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
           +  K   Q    K  +  +       + F  DK
Sbjct: 379 EQSKRSEQRKGEKNVQPADKV--LPYDRFETDK 409


>gi|241760272|ref|ZP_04758367.1| AsmA family protein [Neisseria flavescens SK114]
 gi|241319150|gb|EER55628.1| AsmA family protein [Neisseria flavescens SK114]
          Length = 702

 Score =  113 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/389 (13%), Positives = 127/389 (32%), Gaps = 39/389 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+ ++  +  L  +  V +  +    +  +     ++  +   G ++     I    LP 
Sbjct: 14  LKTLVFSIAVLLCLAAVLSALMFRIFNTENIDAFIQKNFSAH-GCQVKYNANISRKWLPR 72

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P++  KD+ +   E  +    I    +   +  L S    +    +  P L     +   
Sbjct: 73  PTLILKDLSLSSSEPDTPTLSIAESKISFGWSSLWSDAPIIEKWILSNPSLTLGPKN--- 129

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                 +       +  L ++ +  G I+  ++E  Q   L+DL   +            
Sbjct: 130 HLPACLQQNHTSKESFQLNRVIINSGNIRYHNKE--QDIALNDLQFSLR----------R 177

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK-----AISLKIQLFPLAYPIIIDLFG 236
            DS        GT        +++   +    +      ++ L +Q   L   +   + G
Sbjct: 178 ADSDGRPFDISGTLQNIGNPISWQGAGHLVQDDAGWSVPSLKLNLQTVLLKNKLDAQIAG 237

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
           +L W  +  ++   F++    S   NL ++A+   L    +  +G + ++         +
Sbjct: 238 SLNWQNQTALFR-DFNLQ-AESNYQNLHINARSPLL----QFKNGYLHLNTLNGALTAGS 291

Query: 297 SSTDEDNKTKVSQDEENLLNFSE-----------NGAESMHDLNETDFFEEEEKKNKNDD 345
            +   D   K+ +        +            +  ++    +    +++ +  +    
Sbjct: 292 ENNQWDGSFKLDKANLYPTVLTAANFELKGSHKNDRLQTNFTFSSPLVWQKGKGIDA-PK 350

Query: 346 LKKDDIQYSVNKKEEKDNSHDKENQENFS 374
           L    +Q ++N+          E Q NFS
Sbjct: 351 LHLSTLQDTINRLPRPRFISTLEGQANFS 379


>gi|289209643|ref|YP_003461709.1| AsmA family protein [Thioalkalivibrio sp. K90mix]
 gi|288945274|gb|ADC72973.1| AsmA family protein [Thioalkalivibrio sp. K90mix]
          Length = 742

 Score =  113 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 47/376 (12%), Positives = 110/376 (29%), Gaps = 70/376 (18%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SF 79
            +    D  D++E  E +     G+++ ++G I + + P   +  ++ R+   E      
Sbjct: 24  YLVATFDANDYKERIEAEVRDATGRELTLEGPIGLTLFPNLGLRLEEARLGNAEGFGDDP 83

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI----- 134
            ++++ + +    +PLL  E+ V  +  D   LN      G +NW       +       
Sbjct: 84  FAELDVVDVSLAVMPLLRRELDVRHIEADGVRLNLARDEDGRTNWEDLTERAEQARDEAV 143

Query: 135 -----------------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
                              + +  + +   R+   D+ +     L    L++      + 
Sbjct: 144 TGDNGEERTATESRLAMERIGIAGVTLTNTRVHWDDRMTGLQATLDPFRLEVGRFRPGVE 203

Query: 178 SPLSIDSI----------KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
           +PL ++++                   G  +    + + +      N  +       P+ 
Sbjct: 204 TPLEMEAVIRAEGGDLDEPVEFAMGLEGLMNVDLLSNRYSIRRLNANFGVEGAGLPRPVG 263

Query: 228 YPIIIDLFGNLFWN-----------EKQPIYSGVFSVAGD-----------------FSK 259
             +  D+   +                    +G+  +AG                     
Sbjct: 264 ISLETDVALEVADETKMRFERVTAGLGDARLTGLIELAGLGAGEELSVRSELRSNTFSVP 323

Query: 260 LLNLELSAKKSRLSGNFKISDGNVRISRY-KLQSILPN------SSTDEDNKTKVSQ-DE 311
            L   L  +  + +         + +S    L S+  N        T      +     E
Sbjct: 324 DLMEGLGLEPPQTNDPDAFKRVALDLSASGSLTSLELNPFLITVDDTRLTGNARWDTSGE 383

Query: 312 ENLLNFSENGAESMHD 327
             L +F+ +G E   D
Sbjct: 384 RPLFDFNLSGNELNLD 399


>gi|551799|gb|AAA23670.1| ORF; may be in an operon with dcd gene; putative [Escherichia coli]
          Length = 200

 Score =  113 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 77/211 (36%), Gaps = 20/211 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR L  L  L  V++ G   + L ++  DFR+   +Q     G ++ + G ++ H+ P 
Sbjct: 1   MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +  +       + + + +    LPLLS ++ V  + +    +     ++ V
Sbjct: 61  LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV 120

Query: 122 ---------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +      + D   +  +  + V    +     E D+   + ++ LQ+   
Sbjct: 121 RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVF-QHEDDEQVTIRNIRLQMEQD 179

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203
             +           GS    G  N D +   
Sbjct: 180 PQHR----------GSFEFSGRVNRDQRDLT 200


>gi|119944777|ref|YP_942457.1| outer membrane protein assembly protein AsmA [Psychromonas
           ingrahamii 37]
 gi|119863381|gb|ABM02858.1| outer membrane protein assembly protein AsmA [Psychromonas
           ingrahamii 37]
          Length = 640

 Score =  113 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 112/318 (35%), Gaps = 33/318 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++  L     L  +++V    +   ID  D+++  + Q    + + +A+ G I     P 
Sbjct: 1   MKLFLKLFAGLVVLLIVAVVLLITTIDPNDYKQQIQTQVKKSINRDLAINGDISWAFYPQ 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                 +I +   +        KI+  S+  + +PLL G+I++ ++ ++   +N   +  
Sbjct: 61  LGFSSGEIELRNLDGFNRQNLLKIDQASLGIDLVPLLKGQIKIGELTVNGLVVNLITNKN 120

Query: 120 GVSNWFQRKSTMDM---------------------IHNVILEKIHVKGGRIKIIDQESDQ 158
           G SN    +++                        + N+ L  I++   +I+I D ++  
Sbjct: 121 GRSNLDNMQASGAPDPKEKAPEKDISSETEKGFFALENLQLAGININDAQIEIQDLKAAT 180

Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218
            +  +   +Q+        + LS+ +       +   +  +K               A+ 
Sbjct: 181 THKANIKKIQLGKFSPGQETDLSVQADLILDNLQAQLDLQSKLLVAS-------DFSAVE 233

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278
           LK               G +   +        + +    ++L +L +   K +LSG   +
Sbjct: 234 LKQFSLTTLLTGETLPNGKV---DGSINTDIKYDLNNAKAELTDLIIKLDKIQLSGQLSV 290

Query: 279 SDGNVRISRYKLQSILPN 296
               +   R+ L+    +
Sbjct: 291 QTKQLTTVRFALKGNQWD 308


>gi|163737729|ref|ZP_02145146.1| AsmA [Phaeobacter gallaeciensis BS107]
 gi|161389255|gb|EDQ13607.1| AsmA [Phaeobacter gallaeciensis BS107]
          Length = 650

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 38/338 (11%), Positives = 95/338 (28%), Gaps = 24/338 (7%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           +++I +     V +V      L +      +    Q     G+ +   G +   + P   
Sbjct: 2   KLIIRVVIALVVAMVLLLGALLLLPGEKLAQLAAAQIEKQTGRTVTFGGRVGYTLWPTLG 61

Query: 64  VFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           V    + +              E L++      L++G++RV ++    P LN    + G 
Sbjct: 62  VKADRVALSNAPWAGPEPMLTAERLTIGVAAADLIAGKVRVTELSAVLPQLNLSTRADGT 121

Query: 122 SNWFQRKSTMD------------MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
            NW    ++                  V +E +++ G  ++      +    +  ++L +
Sbjct: 122 GNWVLDPASDGETKSVPATPGSMDSLPVSIEALNLTGATLRYA-PHGETPIEMKQIDLAL 180

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
                       I         +           F+        +   ++      L + 
Sbjct: 181 QWPDPTGTVVADITLRPAGDPVQIEAEIG----TFEAFLAGQVSSVGATVTAADTFLRFD 236

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI-SDGNVRISRY 288
              +  G               S+A   +       + K   L  +    +DG + +   
Sbjct: 237 GRANTAGAATGRMTGKSTDLARSLAVLGAAQGIEVPAVKTWLLGSDLTYTTDGRLALRDL 296

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
            L++     +        V+  +   +    +G +   
Sbjct: 297 TLEA----DANKLRGAADVTLGDVPKVTARLSGDQLDL 330


>gi|56695847|ref|YP_166198.1| AsmA family protein [Ruegeria pomeroyi DSS-3]
 gi|56677584|gb|AAV94250.1| AsmA family protein [Ruegeria pomeroyi DSS-3]
          Length = 645

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 43/374 (11%), Positives = 102/374 (27%), Gaps = 24/374 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R ++   G    +  V      L +           Q     G+++ V G +K+   P 
Sbjct: 1   MRWIVRI-GITLVLAAVVMIGALLLLPGDRLARLAIEQIRKQTGREVTVAGEVKLSFWPV 59

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V    + +   +  S     + +GL++      LL GE+R+  +    P L     +K
Sbjct: 60  LGVETGPVTVANADWASAAPMLQAQGLAIGVAAPALLGGEVRITRILAQDPVLRLET-AK 118

Query: 120 GVSNWFQRKSTMDMIHN-----------VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
           G  NW    +                  V L+ + ++  R+  + +E    +    ++L 
Sbjct: 119 GRVNWEFSPTGASGGAATPSGGGSGGQLVTLDGLDLRNARLIYV-EEGKTSFDFGGVDLS 177

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
            S    +    +      G+       +  +        +N       + +      + +
Sbjct: 178 ASWPATDAPLKMEARLEPGAGPISVDLDLAD----LSAFSNGQVSAMQMKMTAPKTSITF 233

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
                + G L              +A      ++L     +     + +         R 
Sbjct: 234 DGRASIDGALAGAAVLDTSDSAAMLAAFGQAGISLPRGLGQ---RADLRAQITYTADGRL 290

Query: 289 KLQSILPN-SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347
            L+ +  +      +    V+  +   +                       + +      
Sbjct: 291 ALRELAADLDGNRLNGAADVTVADPPQVTARLTAGALDLTGLAAAGGTGSGRSDAASGWS 350

Query: 348 KDDIQYSVNKKEEK 361
           +D I  S       
Sbjct: 351 EDAIDASALALANG 364


>gi|254504177|ref|ZP_05116328.1| AsmA family [Labrenzia alexandrii DFL-11]
 gi|222440248|gb|EEE46927.1| AsmA family [Labrenzia alexandrii DFL-11]
          Length = 970

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 59/394 (14%), Positives = 130/394 (32%), Gaps = 56/394 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R+LIGLG    +V+     VP F+     ++   +Q     G ++ + G + + + P 
Sbjct: 1   MQRLLIGLGSFLFLVVTALLVVPFFLPKDQIKQQVVQQIDNRFGWRVRLDGPVSLSLFPG 60

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +  +DI I           +K + +     +  LLSG ++V  + +D+P +    ++ 
Sbjct: 61  FQLTAEDIGISGAAGADGIEFAKAKRMDFGLAWSGLLSGNVKVTGIALDEPLIYLEKNAN 120

Query: 120 GVSNWFQR-----------------------------------KSTMDMIHNVILEKIHV 144
           G ++W  R                                         + ++ ++ + +
Sbjct: 121 GATSWAPRRSLEVLTGEAEETSAPESAKAQSAPDSVAENNAGDSGGEGYLESIGVDSLQI 180

Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD---NKR 201
             G++  ID  +DQ + +  LNL ++A  L     L+ D     V  E +G         
Sbjct: 181 TSGQLTYIDATADQNFVIQALNLSLAAPDLTGDVQLTSDFQFQDVPLEISGTLSNPLGLA 240

Query: 202 SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261
           S  ++  +    +   S+ ++      P+  +L          P    + ++ G      
Sbjct: 241 SGDQVPVDLALTSSENSITLKGTTGLEPVRAELEIAAS----GPSLKTLAALGGQSL--- 293

Query: 262 NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321
             +      +     + S+  V +S   L                        L    +G
Sbjct: 294 --DADPGAFQFDAKVRGSEAAVSVSDLHLVLGQL----SLGGAADADLSG---LVPEVSG 344

Query: 322 AESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV 355
              + D +  D      ++     L   D+ +  
Sbjct: 345 RLVLKDGSIADLLLLAGQELPASGLLSADLAFET 378


>gi|113970501|ref|YP_734294.1| AsmA family protein [Shewanella sp. MR-4]
 gi|113885185|gb|ABI39237.1| AsmA family protein [Shewanella sp. MR-4]
          Length = 606

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/398 (11%), Positives = 112/398 (28%), Gaps = 58/398 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +   +  L ++V+     + +F D  DF+ +         G++  +   +     P 
Sbjct: 1   MKFIKWLIALLVTLVVAVTVYLTVFFDPNDFKPEIVNAVKKQTGREFVIADDLSWTFFPT 60

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    + +   E  +     ++       E +PL S +I +  + +D   +N      
Sbjct: 61  VGINLGGVSLSNPEGFTPKSMLEVNKAVAEVELMPLFSKQIEIAQLSLDGAKINLVTRKN 120

Query: 120 G-------------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
           G                     S    + ++ +  + +    I +ID+   Q   L+   
Sbjct: 121 GSSSLDGLTGNAAEKPATPAEPSAKAQLTSIDVGGVSITNTEINLIDEAKGQTQTLTLKQ 180

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
             + A  L+  +P+S                      F  T      +     +I+L   
Sbjct: 181 FTLGAFSLDKFAPIS--------------------YEFAATMPDMTVSSKGEGQIKLSHD 220

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
              ++I+                   V G+      L     +  ++    +    +   
Sbjct: 221 FNQLVIE------------KLDIETQVEGEGIPNKKLT---AEVSVNSQIALDKKQLSAH 265

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEE-NLLNFSENGAESMHD---LNETDFFEEEEKKNK 342
             KL ++  N+      K  V+   +   ++      +   D          ++      
Sbjct: 266 ISKLTAMDINA----TGKLAVNYGGKVPQISADFQLGDIDLDALLPKSDTAEKQTAATPT 321

Query: 343 NDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMIL 380
                + D+        +   +       N S    ++
Sbjct: 322 QTQAAEPDLTALNGLDAKLTLAVKSIKVANLSTQNWLM 359


>gi|78356725|ref|YP_388174.1| hypothetical protein Dde_1682 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219130|gb|ABB38479.1| Uncharacterized protein involved in outer membrane biogenesis-like
           protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 1095

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 58/444 (13%), Positives = 122/444 (27%), Gaps = 74/444 (16%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR +    G L +V+ +    + + +D        E   +  +G    + G + + + P 
Sbjct: 52  LRTLYYIAGGLAAVLFLCIAGLSVLVDSEALGRALEDMVSRELGVVCRINGAVDVGVFPR 111

Query: 62  PSVFFKDIRIDQKEDGS---FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
           P +   D+ ++Q +  S          + +      +  G I +    ID+P +     +
Sbjct: 112 PGISVHDVVLEQPQGFSGDAPLLTAATVRLDFSLSRIGEGVIELGQAAIDRPVIRLVRQA 171

Query: 119 KGVSNWFQRK-----------------STMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
            G SNW                     S    + N   + +++  G++   D        
Sbjct: 172 DGRSNWQVISAFMGAGRQRQVSSGGWGSIPLRLENARYDGVYIAQGQLFFTDGLRGVSLA 231

Query: 162 LSDLNLQISARFLNIIS-----PLSIDSIKGSVIAEGTGNFD------------------ 198
            ++L+           +      L+  +    +  +G    D                  
Sbjct: 232 AANLDAAFDGGDRRFFTLEADVELTEAAAVQHIALKGELGLDSGGSPAGFVSDVAARGVV 291

Query: 199 ---NKRSAFKITANFPAKNKAISL-----KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250
               +R    + A     N +        +  L        I + G L      P+ SG 
Sbjct: 292 TIMGRRLDTALDAAVSYDNASGEFAVSVTRAALDAAVVSGDISVAGALS---GTPVVSGR 348

Query: 251 FSVAGDFSKL-------LNLELSAKKSRLSGN--FKISDGNVRISRYKLQSILPNSSTDE 301
             V              L   L      L G+  F +    + +S  + + +        
Sbjct: 349 ADVEHLSLPFWFEFGQQLPDSLQHALDDLKGSLLFSLDREGLEVSDLRAEVLGM----AL 404

Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK-------DDIQYS 354
             K  VS     ++           +    +            D+          D    
Sbjct: 405 RGKGAVSDFSAPVIYIDVAAEHLDVNAVFPELAPVPPATLPVADVSLPPVLVFGPDDAGG 464

Query: 355 VNKKEEKDNSHDKENQENFSGDKM 378
           V+   +   + +  +  NFSG  +
Sbjct: 465 VSVGYDIRIAAESFSVWNFSGQGL 488


>gi|239817075|ref|YP_002945985.1| AsmA family protein [Variovorax paradoxus S110]
 gi|239803652|gb|ACS20719.1| AsmA family protein [Variovorax paradoxus S110]
          Length = 669

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/366 (13%), Positives = 93/366 (25%), Gaps = 35/366 (9%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDG--SFESKIE 84
            W   R    R  +   G+K  +   + + I L   +V    I           +  K E
Sbjct: 34  PWDTLRGPVNRYVSEKTGRKFEITRRLDVGIGLRGATVKADGIEFANPPWAREPYLVKAE 93

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV 144
                    PL+S ++ +  + +  P L   +   G   W   K T D     ++  + V
Sbjct: 94  RAEFDIRLWPLVSRKVVIPRLALSSPTLGLQIEPDGRRTWALGKDTSDAGTVPVIGLMQV 153

Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204
             G +  +       +   DL+  +S        PLS             G +  +    
Sbjct: 154 DSGAVDFL-----ATHLGVDLHADVSYDTSRGTLPLSY---------RIKGRYKGQPLTA 199

Query: 205 KITAN---FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261
           +                  +++   A    +   G +    +       F + G     L
Sbjct: 200 EGRTGNVLQLKAAGQPPFPLEVDAAAGQTRLKASGTVTDFAELDGIQATFDLKGQTLGAL 259

Query: 262 NLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ-DEENLL 315
              L           LSG  +       ++  K +  L +         +  +  +   L
Sbjct: 260 FPLLGIALPETSPYALSGELRKRGKLWEVAGLKGRLGLSD----IAGDMRFDKAGQVPHL 315

Query: 316 NFSENGAESMH-DLNETDFFEEEEKKNKNDDLKKDDIQYSVN----KKEEKDNSHDKENQ 370
                       DL         E+  K  +                K       D E  
Sbjct: 316 AGELRSKVMDMDDLGPLIGLPPTERSAKAVEGVAPPPTIKAKRAPGAKVLPSAKLDFERL 375

Query: 371 ENFSGD 376
              + +
Sbjct: 376 RAMNAE 381


>gi|84499564|ref|ZP_00997852.1| AsmA family protein [Oceanicola batsensis HTCC2597]
 gi|84392708|gb|EAQ04919.1| AsmA family protein [Oceanicola batsensis HTCC2597]
          Length = 654

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/357 (10%), Positives = 93/357 (26%), Gaps = 44/357 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R + + +G + +  LV        +      +    +     G+++ + G  +  + P 
Sbjct: 1   MRLIRLVIGMIIAFSLV-FVAGLFLVPGERIAQVAADELGRRTGREVRIGGEARFTLWPD 59

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V    +RI   +        + + +++  +   L+  +IR+  ++ + P +    ++ 
Sbjct: 60  LGVTVDGLRIANADWSDNGPMFQAQRVTIGVDAAALIRRDIRIRTLHAEAPQILLERNAD 119

Query: 120 GVSNWFQRKSTMDMI--------------------HNVILEKIHVKGGRIKIIDQESDQV 159
           G  NW                                  ++   + G  +   D  +   
Sbjct: 120 GEGNWEVGGKAAVAATEAQPSGAAPAATAAAPVQRPAFTIDDAVITGASVYFADHRTGTE 179

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
               D++L ++                G    + T   +        T   P       +
Sbjct: 180 VSQRDIDLTVAYPEAR-----------GPARIDLTLRPNGAPIRLSGTIADPRAFAEARI 228

Query: 220 K-IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS----- 273
             +     A        G        P   G  S+    +  L   L      LS     
Sbjct: 229 SPVVFDLEAPSASGRFEGRASV---GPEAEGALSLDIADTGALARALGRADPGLSRGLGR 285

Query: 274 -GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
             +        R+    L+    +S  +                 +        DL+
Sbjct: 286 DLDLAAQVTLTRVGLLALREGRMSSGGNAATVAADLTTGGPRPRLNARVDAGPLDLS 342


>gi|163752237|ref|ZP_02159438.1| asmA protein [Shewanella benthica KT99]
 gi|161327867|gb|EDP99046.1| asmA protein [Shewanella benthica KT99]
          Length = 612

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/374 (10%), Positives = 110/374 (29%), Gaps = 28/374 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ V      LF +       + L  D  DF+ +         G+ + +   +     P 
Sbjct: 5   MKIVKWFFVVLFLMFASLVAYLTLVFDPNDFKSEIVNAVKKQTGRDLIIAKDLTWTFFPS 64

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +   DI +   +        K+  +    E LPL S ++ +  + +D   +N      
Sbjct: 65  IGIELGDITLSNPKGFDNVSMLKVSKIVAEVELLPLFSKQVEIAKLNLDGLVVNLETRKD 124

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           G +++   +++     +  L       G +  +D         + + +         +  
Sbjct: 125 GRTSFDGLQTSATEDKSAQLNDTTALSGSLSSLD-IGGVSITNTQIRISDKQAGTEQVFS 183

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
           L   ++ G       G F     +F                I++      I +       
Sbjct: 184 LDYLTL-GKFSL---GEFATLEYSFSAEMPDMTLMSQGKGSIRVAQDMTQIQV------- 232

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
                  +    ++AG+      L++S           +    V +   +L +       
Sbjct: 233 -----KDFKITNAIAGEAIPNKKLDISLLT---QLEILLETKQVHLILDELNAG----DI 280

Query: 300 DEDNKTKVSQD-EENLLNFSENGAESMHD-LNETDFFEEEEKKNKNDDLKKDDIQYSVNK 357
               K  ++   +   +  + +  +   D L       ++ K+    +  + +   +  K
Sbjct: 281 QAKGKVDIAYGHKVPQIIATLDLGDIDLDKLLPQTDKADKAKEKSQAEATQVEPDLTAMK 340

Query: 358 KEEKDNSHDKENQE 371
             +   +   ++ +
Sbjct: 341 SLDLTLALTAKSIK 354


>gi|226330818|ref|ZP_03806336.1| hypothetical protein PROPEN_04739 [Proteus penneri ATCC 35198]
 gi|225201613|gb|EEG83967.1| hypothetical protein PROPEN_04739 [Proteus penneri ATCC 35198]
          Length = 185

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 68/186 (36%), Gaps = 11/186 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R L  L  L  V+L G   + L I+  DFR     +     G K+ ++  ++ H+ P 
Sbjct: 1   MKRFLTTLAILLVVILAGLTALVLLINPNDFRGYLIERVEKQSGYKLTLQDDMRWHVWPK 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+    + +            + + +  E LPLLS ++ V ++ +    +     SK +
Sbjct: 61  LSIISGKMSLTAPGAEMPLVTADNMRLDVELLPLLSHQLEVKEVMLKGAVVRQTPESKAI 120

Query: 122 SNWFQRKSTMD----------MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
                  +  D              + + K+++    I     +  +   L D+NL +  
Sbjct: 121 PKILPPSTPRDISRQVIEPKTNNWQLNIAKVNISDSLIIW-QMKDGEQLNLRDINLSLKT 179

Query: 172 RFLNII 177
                 
Sbjct: 180 DEKKTS 185


>gi|227820913|ref|YP_002824883.1| AsmA protein family precursor [Sinorhizobium fredii NGR234]
 gi|227339912|gb|ACP24130.1| AsmA protein family precursor [Sinorhizobium fredii NGR234]
          Length = 641

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/357 (11%), Positives = 102/357 (28%), Gaps = 29/357 (8%)

Query: 6   LIGLGFLFSVVLVGA-FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64
            +    +  ++ +G    +PL +  T  R   ER      G K  + G  ++   P   +
Sbjct: 56  FVWSAAVGVLLAMGYNAALPLLVSTTGVRATMERTLDSWSGGKSRINGEPEVRFWPKLLL 115

Query: 65  FFKDIRI-DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
                 I     D    ++I  ++     L  L G+  + D+ +  P +     + G +N
Sbjct: 116 TLPSATIESTGPDPRPLAEIGRITASFSPLSALLGDPTLEDISLVDPVITIERRADGTTN 175

Query: 124 WF-----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
           W                      I +  GR++++D+ +                   I  
Sbjct: 176 WQTPHWLAPPEAPASGRETAFGDIAIVNGRLRVLDRTAG----------GNDVDIAGISG 225

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKIQLFPLAYPIIIDLFGN 237
            +   S    + A+ +    ++  A+ I    P    A     ++    + P+     G 
Sbjct: 226 TIKWPSFAERLSAQLSARLRDEEIAWAIVCEEPLALFARRNASLKTSITSAPVTFSFEG- 284

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLL--------NLELSAKKSRLSGNFKISDGNVRISRYK 289
           +      P  SG   ++      L           L +    +       +  +++    
Sbjct: 285 VGNLSSVPFASGHLQMSATSLATLVQWYQGTSTETLPSGGLSIDTRVTTGEKTLKLDDLA 344

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346
                 +++   D    +   +   +  +        +           + ++   L
Sbjct: 345 FTMGGASATGVLD--IALQDGKAPSVEGTLAFDRIDLNGVPVAALTPFGRDDRLWRL 399


>gi|255065813|ref|ZP_05317668.1| AsmA family protein [Neisseria sicca ATCC 29256]
 gi|255050131|gb|EET45595.1| AsmA family protein [Neisseria sicca ATCC 29256]
          Length = 708

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/382 (12%), Positives = 109/382 (28%), Gaps = 27/382 (7%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           + LI           G +            E   + A     + I     I+    P P+
Sbjct: 13  KFLIFSLIAVIATAAGLYASVYNFFTPKRIETLTQSALQSTQRTIRFSPEIRRSWFPRPT 72

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
           +  K++ I           I+  ++   +  L +    +    +    ++   +  G  +
Sbjct: 73  LTLKNVVISYPNSTQAAIHIKETNIGIGWSSLWNDTPIIEKWVLKGADVSIERTENGKWS 132

Query: 124 WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII-SPLSI 182
                          L ++ V+   +++    +        LNL+             +I
Sbjct: 133 LQDLWQQPRNTA--TLNRLVVESSTLRLKLDNTPYTIEDFSLNLRSEDSDGRRFKIGGNI 190

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242
            + +  +   G G      + + I          +  + Q       + I++   L W  
Sbjct: 191 RNPQFPLEWNGNGLLQTNAANWSIP--------ELRFEAQSRRDQNTVKINITSALDWQT 242

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
           +              S   NL L+A+   L   FK +  ++        +  P+S    D
Sbjct: 243 QNHTLQVSNINLRADSVQQNLHLTAQAPLL--IFKDNHLSLNTVSGAFTAGSPDSQW--D 298

Query: 303 NKTKVSQDEENLLNFSENGAESMH----DLNETDFFEEEEKKNKNDD------LKKDDIQ 352
              K+ +        + +  +        L +T F        +         L+   +Q
Sbjct: 299 GSFKLDKTNLRPSVITLDSFDLNGRYKNQLRQTSFTVSGPMLWQKKTGLQSDSLRITTLQ 358

Query: 353 YSVNKKEEKDNSHDKENQENFS 374
            +VN+  +       +   NFS
Sbjct: 359 DTVNRLPQPRFISMLDG--NFS 378


>gi|256829729|ref|YP_003158457.1| AsmA family protein [Desulfomicrobium baculatum DSM 4028]
 gi|256578905|gb|ACU90041.1| AsmA family protein [Desulfomicrobium baculatum DSM 4028]
          Length = 682

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/406 (13%), Positives = 112/406 (27%), Gaps = 52/406 (12%)

Query: 18  VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG 77
           + A  + L  D  D++    +      G+++ + G I +   P+ SV   D+ +   +  
Sbjct: 20  ILAGVLLLNFDPNDYKSQIVKSVRDNTGRELLISGDIGLEFFPYLSVSISDLELGNCQGF 79

Query: 78  S-FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM--- 133
           S     + G  ++   LPLLS  + V  + I+   L       G  NW    +       
Sbjct: 80  SGPFLTLSGAHLKTRLLPLLSSRLDVVAIDIEGLSLFLSRDESGRGNWMDLATPPSDDAS 139

Query: 134 ---------------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                          +  +I++ +HV   RI   DQ S + + ++ + L +S     +  
Sbjct: 140 APDKPVLARDKRVPFLAGLIVDGLHVSDARIVWDDQRSGENFEVAGIRLDVSDFAFGVPF 199

Query: 179 PLSIDSIK------GSVIAEGTGNFDNKRSAF------KITANFPAKNKAISLKIQLFPL 226
            +   +          +        D  R          I +         ++ +     
Sbjct: 200 VVDTYARAKRGEITAELDFSAKATLDLDRLGVEDLAMKAILSGDSLPGSPETISLSADFF 259

Query: 227 AYPIIID--------LF-GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
           +    ID        L  G           +GV  VA    K     L            
Sbjct: 260 STDGRIDNGRMQGLGLDVGFSAQASSGTDINGVLDVARFNPKDAFTRLGLAFPDFKDPSA 319

Query: 278 ISDGNVRISRYKLQSILPN-------SSTDEDNKTKVSQDEENLLNFSENGAESMHDL-- 328
           + +     +  K Q                   +  V       ++   +      D   
Sbjct: 320 LEEVAFSCTLTKGQDGFAATNLRLVIDDQALRGRVAVHGRTNPQVDLDLHLDTLNLDRYR 379

Query: 329 ---NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371
              +  +        ++N +L    ++          +S    N  
Sbjct: 380 MHSDPGEAQASSGSSDENIELPVKMMRKLNLNATLAVDSLTVYNLR 425


>gi|218887947|ref|YP_002437268.1| AsmA family protein [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758901|gb|ACL09800.1| AsmA family protein [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 711

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 58/429 (13%), Positives = 122/429 (28%), Gaps = 82/429 (19%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF------ 79
            I+  D++      A    G+++   G + +   P+  V F  + +    D         
Sbjct: 29  TINPNDYKGRIADAARSATGRELVFDGDLSLSFFPWLGVAFGPMHLGNPPDFPKAGAPSA 88

Query: 80  -------ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------- 124
                     I+G  +R  F+PLLS  + V ++ +D  +LN   ++ G +NW        
Sbjct: 89  ASGDDDIFLSIKGGGLRVAFMPLLSKRVEVAELMLDGLYLNLVRAADGRTNWDFAKPGQT 148

Query: 125 -----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
                             Q  ++      V ++ + VKG  +   D  + Q +   DLN+
Sbjct: 149 PAATAAPAPQSTQSAQPAQPSASGGAPLAVAVDTLSVKGASLSFRDLGTGQQFRARDLNV 208

Query: 168 Q------------------ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209
                              +S +  +I + LS+ +   S +       D           
Sbjct: 209 NVNGLAPGGDPADIRLAVAMSGQKPDIDADLSLAARVQSDLDGSVLRIDGLTVTLTPKGG 268

Query: 210 -FPAKNKAISLKIQLFPLAYPIIIDLF------------GNLFWNEKQPIYSGVFSVAGD 256
             PA    + L   L     P  +D+              N         + G+ ++ G 
Sbjct: 269 VVPAGIGKVELAGDLTVHTVPQRVDIARLSLSTPTLKVGANGTAALGAQSFEGLVTLTGS 328

Query: 257 FSKLLNLELSAKKSR---------LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
             K +    +  ++          L  + + +   + +     +       T    K   
Sbjct: 329 PRKAMEALGTPMRTADPKVLDALDLKLDVQAAPAKMDVRSITGKL----DDTAIQGKASA 384

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
                 ++           D       ++ +   K      D          +   +  K
Sbjct: 385 VPGAVQVIRAELALDAIDVDRYLPPEGDKGKATEKGAAPTTDKGGKDGKAAPQDGTAEAK 444

Query: 368 ENQENFSGD 376
           ++      D
Sbjct: 445 KSLRTIDAD 453


>gi|88860822|ref|ZP_01135458.1| putative AsmA protein [Pseudoalteromonas tunicata D2]
 gi|88817035|gb|EAR26854.1| putative AsmA protein [Pseudoalteromonas tunicata D2]
          Length = 693

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/373 (14%), Positives = 118/373 (31%), Gaps = 38/373 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +   L  L   V++    +P  +                 G+ + +KG   + + P 
Sbjct: 50  MKTLFKILAGLLLGVVLLIVALPFLVPVDYIVNKVSESVEKATGRTLVIKGDKTLAVFPS 109

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +   D+     +         +  L+++  +L  L G+I++    I QP +       
Sbjct: 110 LKLELNDVHFANIKGSEHADMVSMAQLAIQIPYLSALLGDIQLEKFVIRQPKIILEKMPS 169

Query: 120 GVSNW---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
           G  NW                +  + +    +V L ++ +    I  ID ++   Y LSD
Sbjct: 170 GKVNWQLFDAVAATTEQPTSAKGATQLPQGFDVSLGEVAIYDATISYIDHQTKAQYQLSD 229

Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI-SLKIQL 223
           + L            +++ S+   +   G   +  ++       N  AK  A     +  
Sbjct: 230 VEL-----------AVALPSLYQPLEVSGELVYQGQKFELVTQLNTLAKVIAGDDFTLGS 278

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF----SKLLNLELSAKKSRLSG-NFKI 278
              +        G +   +    +SG   + GD          + L AKK   +      
Sbjct: 279 AIDSKLFNFKFDGLVA--KAGQDFSGSLDLKGDSVKQILTWQKIALDAKKDAFNQFELAA 336

Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE 338
           +           +  L     D + +  V   ++  L+ S +    M +LN     + E+
Sbjct: 337 TMHFANQKLTLTKLKLALDELDVNGQAVVDLAKK--LSISADVDLGMLNLNPYLPVKPEQ 394

Query: 339 KKNKNDDLKKDDI 351
              + D  +    
Sbjct: 395 VVAQEDKKQVSQP 407


>gi|258404248|ref|YP_003196990.1| AsmA family protein [Desulfohalobium retbaense DSM 5692]
 gi|257796475|gb|ACV67412.1| AsmA family protein [Desulfohalobium retbaense DSM 5692]
          Length = 704

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/384 (11%), Positives = 110/384 (28%), Gaps = 44/384 (11%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG-- 77
           A    +  D+   +   E       G+K+ + G I + +   P++  +D+ +   + G  
Sbjct: 21  AAVFLVTYDYNALKPQIEAAVEKNTGRKLTLDGDISLALGLTPALVVEDVSLANAQWGSK 80

Query: 78  SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN-------------- 123
               ++    ++   LPL    + +  + +    +    +++GVSN              
Sbjct: 81  PQMLEVGRFELQVALLPLFQRNVEIQRVVLRDTSVLVETNTQGVSNLTLHKPQAAAEPEQ 140

Query: 124 ------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
                      S    +  + L+ + V+ G I + D   + V   S   L +        
Sbjct: 141 ETSPEAPSDAASQKGPLPGLELDNVLVENGSIDVRDAAGETVTSFSVQRLALQTLPNKD- 199

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA--KNKAISLKIQLFPLAYPIIIDLF 235
                      V     G F+ +  +   T        +      + L   +    + L 
Sbjct: 200 -----------VQMTFDGQFNGQPLSMSGTVGPLQGLTDAQQQWPVDLAVQSGSASVALE 248

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF--KISDGNVRISRYKLQSI 293
           G +     Q       S        L   +  +   ++G      +  +     ++L S+
Sbjct: 249 GAIRDVFAQRGLDLDLSATIPEPAALKPLVGQEIP-VAGPIECTATLTDTAAKTFRLDSL 307

Query: 294 LP-NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
                         ++      L+ + +    + D+  T    +          ++    
Sbjct: 308 QVRQGENRLSGTVSLALG--PPLSVTADLTSPLLDV--TAITTQPSGDTAPPQEQQGASS 363

Query: 353 YSVNKKEEKDNSHDKENQENFSGD 376
            + +++   D     E     +  
Sbjct: 364 AAGDQRVFPDTELPWEALRQINAQ 387


>gi|317153723|ref|YP_004121771.1| AsmA family protein [Desulfovibrio aespoeensis Aspo-2]
 gi|316943974|gb|ADU63025.1| AsmA family protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 729

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/388 (13%), Positives = 111/388 (28%), Gaps = 48/388 (12%)

Query: 2   LRRV----LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           +++V    +IG G L ++ ++         D  +++    R      G+ +   G I + 
Sbjct: 1   MKKVVKLGMIGAGILAALAVLALGVFIYTFDINNYKGAISRLVAEKTGRTVTFGGDIAMT 60

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           + P   V   DI +                  +    LPLLSG +    + +D   +   
Sbjct: 61  LFPRLGVRMADISLSNASGFGQPQMLSARQARLEVRILPLLSGRVSFGHLALDGVVVGLE 120

Query: 116 LSSKGVSNWFQRKSTMDMIHN---------------------VILEKIHVKGGRIKIIDQ 154
             + G +NW      +                          + +  + +    +   D+
Sbjct: 121 RDATGRTNWGDLTDRVTSDPPAPDQGGAAGGAQSGQDTGSFVLEIAGVSLTESTLIWDDR 180

Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSID--------SIKGSVIAEGTGNFDNKRSAFK- 205
            S     L +++L           P++           + G+V    +   D+   +   
Sbjct: 181 RSGVSVTLDNVSLTTGTIGGAEPFPVTAQCGVRSVDPELSGTVEFSASTVVDSAVISLSE 240

Query: 206 ITANFPAKNKAISL-KIQLFPLAYPIIIDLFGNLFWNEKQPI--YSGVFSVAGDFSKLLN 262
           I     A+ K +      +   A  + +D+ G     +   +  Y     +AG       
Sbjct: 241 IVLTAKAEGKDVPGSSATVEVAADAVSVDMRGQTVRVDGLVVSGYQAAIRLAGS------ 294

Query: 263 LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA 322
           L       RL+    +   + R S   L ++  +  +  D            +    +G 
Sbjct: 295 LTGFGAGGRLAATVGLDPFDARQS---LAALGLDVPSTSDPSALTRVQGTADVVVDADGF 351

Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDD 350
           E        D               + D
Sbjct: 352 EIRGLDATVDDTRISGSFAHRVREDRPD 379


>gi|261379812|ref|ZP_05984385.1| AsmA family protein [Neisseria subflava NJ9703]
 gi|284797498|gb|EFC52845.1| AsmA family protein [Neisseria subflava NJ9703]
          Length = 697

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/389 (13%), Positives = 127/389 (32%), Gaps = 39/389 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+ ++  +  L  +  V +  +    +  +     ++  +   G ++     I    LP 
Sbjct: 9   LKSLVFSIAVLLCLAAVLSALMFRIFNTENIDAFIQKNFSAH-GCQVKYNANISRKWLPR 67

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P++  KD+ +   E  +    I    M   +  L S    +    +  P L     +   
Sbjct: 68  PTLILKDLSLSSSEPDTPTLNIAESEMGFGWSSLWSDAPILEKWILSNPSLTLGPKN--- 124

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                 +       +  L +I +  G I+  ++E  Q   L+DL   +            
Sbjct: 125 HLPACLQQDPSSKESFQLNRIIINNGSIRYHNKE--QDIALNDLQFSLR----------R 172

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK-----AISLKIQLFPLAYPIIIDLFG 236
            DS        GT        +++   +    +      A+ L +Q   L   +   + G
Sbjct: 173 ADSDGRPFDISGTLQNIGNPISWQGAGHLVQDDAGWSVPALKLNLQTVLLKNKLDAQIAG 232

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
           +L W  +  ++   F++    S   NL ++A+   L    +  +G + ++         +
Sbjct: 233 SLNWQNQTALFR-DFNLQ-AESGYQNLHINARSPLL----QFKNGYLHLNTLNGALTAGS 286

Query: 297 SSTDEDNKTKVSQDEENLLNFSE-----------NGAESMHDLNETDFFEEEEKKNKNDD 345
            +   D   K+ +        +            +  ++    +    +++ +  +    
Sbjct: 287 ENNQWDGSFKLDKANLYATVLTAANFELKGSHKNDRLQTNFTFSSPLVWQKGKGIDA-PK 345

Query: 346 LKKDDIQYSVNKKEEKDNSHDKENQENFS 374
           L    +Q ++N+          E Q NFS
Sbjct: 346 LHLSTLQDTINRLPRPRFISTLEGQANFS 374


>gi|77164017|ref|YP_342542.1| hypothetical protein Noc_0489 [Nitrosococcus oceani ATCC 19707]
 gi|254436027|ref|ZP_05049534.1| AsmA family [Nitrosococcus oceani AFC27]
 gi|76882331|gb|ABA57012.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
 gi|207089138|gb|EDZ66410.1| AsmA family [Nitrosococcus oceani AFC27]
          Length = 665

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 58/391 (14%), Positives = 125/391 (31%), Gaps = 28/391 (7%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           ML+++ I    +   +L+      + ID    ++           ++  + G +K+++L 
Sbjct: 1   MLKKLFILFAIILISLLLLVILAGVMIDENRVKKWVSNYIEQEYDREFEITGELKLNLLS 60

Query: 61  -FPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
             PSV  K I+++  E       + I  +  + EF PL+ G I + D+ I    ++  L 
Sbjct: 61  LQPSVTAKGIKLENAEWADKPNMATIGKVFFQFEFFPLILGNINILDVEIRDGRISL-LE 119

Query: 118 SKGVSNWF-QRKSTMDMIHNVI---LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
            +  +NW                  +    +    +    +   + + L   N+Q+   +
Sbjct: 120 KQNKTNWDIFLPEEKKPPGYFSVEKIRNFRLNDFTVTYQSRVKKETHTLLAKNIQLQNFY 179

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
                                G  D+    F++            L + L      I + 
Sbjct: 180 STKR------------KGSFQGKVDSIPIGFQLNQKPINAENVDKL-LLLTGHIGTIELY 226

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
             G++  +            +G+    L      K          +  +  + +  +   
Sbjct: 227 FTGDISDDFNLIRGKSRVKGSGETLLQLAELAGLKIKNFRSYDSFATIDANLEKMLINVN 286

Query: 294 LPNSST---DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350
             + +          K+  +E+  L     G      L+  DF    +K     + +  D
Sbjct: 287 QMDITYGQSQMTGTLKIDSNEKRTL---VRGDLLFPVLSSPDFRSLTKKSVAELEEETTD 343

Query: 351 IQYSV-NKKEEKDNSHDKENQENFSGDKMIL 380
           I      K+ EK    D +  E+F  +K+ L
Sbjct: 344 IDVKAQEKQSEKKKLFDDDPLESFIPEKLEL 374


>gi|222084925|ref|YP_002543454.1| hypothetical protein Arad_0961 [Agrobacterium radiobacter K84]
 gi|221722373|gb|ACM25529.1| conserved hypothetical membrane protein [Agrobacterium radiobacter
           K84]
          Length = 631

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/356 (12%), Positives = 103/356 (28%), Gaps = 38/356 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R   I L  +  V  V   T P  I     R   E+  +   G +  ++G   +   P P
Sbjct: 25  RTSGIVLLTILIVFAVFRATAPFLISSGLVRSGIEKALSDWTGYRAQIEGDPTLEFWPTP 84

Query: 63  SVFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            V    + I +  ++G     I+ LS        L G     + +  +P +       G+
Sbjct: 85  RVTLNQVNIREPTKNGKVLGHIDSLSADFSLFAALRGRAHFHEFHFLRPTIYIRRDETGL 144

Query: 122 SNW----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
            +W                  +   M    +  +  + ++ G +++ D+ +  +Y ++ +
Sbjct: 145 IDWTNEGLLSKAIERVETSANQGMPMRREQDADIGTLTIEDGTVEMADERTGNIYKMNGI 204

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
           N  I+   L+             + A      + +       +  P    A         
Sbjct: 205 NADITWPRLSR-----------PMTAVILARLNGQDVKIDFNSTQPLLLFAGKSVDARTS 253

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFK 277
            + P+I   +  +         +G   ++                         L+ +  
Sbjct: 254 FSSPLISWTYSGVSSISDFSTLAGNLDLSVPNVPSFLAWSGEHLPVANTLQNVSLNADIV 313

Query: 278 ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
                +R +    +     +S   D     +   +  ++ +    +   +   T F
Sbjct: 314 AIQNGLRFNNLNFKVNDSAASGVMD--LNYTAAGKPKISGTLAFDQMNLNPFLTAF 367


>gi|298530580|ref|ZP_07017982.1| AsmA family protein [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509954|gb|EFI33858.1| AsmA family protein [Desulfonatronospira thiodismutans ASO3-1]
          Length = 645

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 101/332 (30%), Gaps = 70/332 (21%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ESKIE 84
           +D+   + + E       G +++++G I++  LP+  +      +    D        +E
Sbjct: 30  VDFNKHKPEVEAGIYNATGYEVSLEGDIELSFLPWLGIDVGKASVANPPDFEDENLGSVE 89

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------------------- 124
            L +R +  PLL G++++  + +   +L+    ++G  NW                    
Sbjct: 90  ALQIRLKVWPLLLGQVQMDRVVLKGLNLDLVKDAQGRPNWIASRPEESREGVMLGSSLAY 149

Query: 125 ------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                  Q+ S    I  + +  + +    I   D  +D  + + DL+L       +   
Sbjct: 150 AGENEPAQQDSGDIFIPALDIAGLEITDSNISYKDMGTDVHFRIEDLDLLTERIRQDEPF 209

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
            L  D    +   E  G       +    A    + K+I L            +D+    
Sbjct: 210 DLQSDMKFKNFSPELDGRI-----SLTTQALLQGEEKSIRLS----------ELDMD--- 251

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN--FKISDGNVRISRYKLQSILPN 296
                                   L    K +R+ G+  +     ++  S   +Q++  +
Sbjct: 252 -----------------LDLSGEPLHEPVKDARIRGDIVYAFGANSMEFSELSIQALDAD 294

Query: 297 SSTDEDNKTKVS-QDEENLLNFSENGAESMHD 327
                  K      D    +     G     D
Sbjct: 295 ----LSGKISARELDAVPQIRIDLEGDNLDLD 322


>gi|89073407|ref|ZP_01159931.1| Hypothetical AsmA protein [Photobacterium sp. SKA34]
 gi|89050894|gb|EAR56368.1| Hypothetical AsmA protein [Photobacterium sp. SKA34]
          Length = 730

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/438 (10%), Positives = 129/438 (29%), Gaps = 74/438 (16%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L  L  +  VV++G   +   ++   F+     Q     G+++ + G I     P 
Sbjct: 1   MKKLLYVLIGIIIVVVLGITALVTLVNPNQFKAVIAEQVKKQTGRELDIHGDINWRFFPT 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +   +  ++  +        + +   +    LPLLS E+ +  +++D  H+       
Sbjct: 61  LGLSVGETTLNNPQGFAQPNLIQFKQAELSVSVLPLLSHELDIGKVHLDGAHVFVQTLKD 120

Query: 120 GVSNWF--------------------------------QRKSTMDMIHNVILEKIHVKGG 147
           G SN                                             + L  + +   
Sbjct: 121 GRSNLDGLAEKSSTKEVNDSTVPKADKDAVNNVQDEKSTASKVTAQPWKISLAGVELINA 180

Query: 148 RIKIIDQESDQVYFLSDLNLQIS----ARFLNIISPLSIDSIKGSVIAEGTGNFD----- 198
            + II+ ++     LS +N  +       +      +S  +      A+G+   +     
Sbjct: 181 SVDIINDKTASNIALSKVNFTLDKLVPKTWTKATFDISGSANALQFAAKGSTELNLSSTY 240

Query: 199 --NKRSAFKITANFPAKNKAI---SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV--- 250
             ++     ++         I    + +  F       I+L  +    +   +  G    
Sbjct: 241 QLDELKNLDLSLTAQDGKTEIKHAQVALDHFKYGQWATINLNIDGQLPDLAFVTKGQTQL 300

Query: 251 --------FSVAGDFSKLLNLELSAKKSRL------SGNFKISDGNVRISRYKLQSILPN 296
                    ++            +  + ++      + ++ ++   V++S+    +    
Sbjct: 301 KLSSDRNILTLENLSIDNALSGKALPRPKMQVNIKTNASYDLTTKTVKLSKLDANA---- 356

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETDFFEEEEKKN---KNDDLKKDDI 351
                         +  ++ F+ +      D  L +       EK     +  +    +I
Sbjct: 357 DELALMGDMSFINRDVPVIRFNLSSDNINVDNWLKKQHGVVSSEKTAASEQAANNTSTEI 416

Query: 352 QYSVNKKEEKDNSHDKEN 369
             S  ++    ++ + + 
Sbjct: 417 AASTPQQLSSQSASNTQP 434


>gi|91776876|ref|YP_546632.1| AsmA [Methylobacillus flagellatus KT]
 gi|91710863|gb|ABE50791.1| AsmA [Methylobacillus flagellatus KT]
          Length = 893

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 57/384 (14%), Positives = 115/384 (29%), Gaps = 38/384 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81
                 +  D++    +       + + + G IK+   P        I + +       +
Sbjct: 25  VFVATFNPNDYKPMIVQLVKDKKQRTLDIDGDIKLAFWPKLGADLGRISLSEHNGDKEFA 84

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR----KSTMDMIHNV 137
            +EGL +    +PLL  ++ V  +Y+D    N      G +N+       K         
Sbjct: 85  AVEGLKVSVALIPLLRKKLVVDAVYVDGARANIVRYQDGSTNFDDLLSEDKEESSQEIAF 144

Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSV 189
            +  I+V    +   D+ +D  Y +   NL+     L     L+ +         ++  V
Sbjct: 145 DISSINVSNSAVSFHDEATDNTYAIEKFNLKTGRVALATPFDLASNFEVSASAPKVEARV 204

Query: 190 IAEGTGNFDNKRSAFKIT------ANFPAKNKAISLKIQLFPLAYPIIIDLFGN---LFW 240
             +G    D +   F I           A  + + +++     A P  ++   N   L +
Sbjct: 205 KLQGNFMADLESQHFAIQKLDTVVKGNIADVQEVDIRLTGDVDARPEHMEFLVNGLKLAF 264

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS----------------GNFKISDGNVR 284
             +          A     +   E+S  K+ L+                 + K S   ++
Sbjct: 265 AGQLADAKLAADFAAPRLVVRQDEVSGDKAELTFSQQKTDQSIKAQLVLADIKGSPRELQ 324

Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQ-DEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343
            S    +  L  +    ++K           L F         D+ +    +   +    
Sbjct: 325 SSGINGEFSLKQADRSVESKFSSPFKGNLEDLVFELPKLAGRIDIKDKALPKGAAQGEFA 384

Query: 344 DDLKKDDIQYSVNKKEEKDNSHDK 367
             L  D  Q  V+     D    K
Sbjct: 385 FKLLADVKQEKVDSDFSLDVEDTK 408


>gi|300024249|ref|YP_003756860.1| AsmA family protein [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526070|gb|ADJ24539.1| AsmA family protein [Hyphomicrobium denitrificans ATCC 51888]
          Length = 778

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 54/369 (14%), Positives = 116/369 (31%), Gaps = 60/369 (16%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           + I   FLF +++ GA    L  +      R+    +     G+++ + G       P  
Sbjct: 45  LGIVYFFLFVLLVGGAGVAYLAFNPPSDFIRQRIADEVRSRTGRELVMAGPASFTFYPAI 104

Query: 63  SVFFKDIRIDQKEDGS-FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            +  KD+ +          ++++ L +      LLS    +  + +  P  +F +   G 
Sbjct: 105 GISLKDVSLSGPPGMDGKLAQMQALDVSINASALLSRRAEIQSLVLRNPTFDFRIDKDGR 164

Query: 122 SNWFQRKSTMD---------------------------------MIHNVILEKIHVKGGR 148
            NW                                          IH++ L+ + ++GG 
Sbjct: 165 KNWQFASGPEPVRYAELQAQGTRADVAPFVMAAADAAPAAQSGIAIHDLKLDDVRIEGGT 224

Query: 149 IKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT- 207
            +  D+ S +   +  +N +           L + S+   + A G   + +K   F  + 
Sbjct: 225 FRFTDERSGRTEQVHGVNAK-----------LGLPSLSKPLTATGQFGWHDKLLNFDGSV 273

Query: 208 --ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
                    +A  LK +          D  G++  +E      G  +   D ++ L    
Sbjct: 274 SDVGNFKLQQAAHLKFKAKNDVLAASYD--GSVTLDEGVA-LEGQVNAQSDSARALAQWF 330

Query: 266 SAKKSRLSGNFKISDG-----NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320
             +   +SG   +S       +  ++ ++  +             +V+           +
Sbjct: 331 GTRLPPVSGFGPLSIQGTLKTSGNVTDFQ-NAQFGLDGAVAKGTIRVTTGGVRPF-VEAD 388

Query: 321 GAESMHDLN 329
            A S  DLN
Sbjct: 389 LAISELDLN 397


>gi|110835145|ref|YP_694004.1| hypothetical protein ABO_2284 [Alcanivorax borkumensis SK2]
 gi|110648256|emb|CAL17732.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 735

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 101/304 (33%), Gaps = 21/304 (6%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +L+ +LI L  +  ++ +  F +   ID  +F+ + E+QA       + ++G +     P
Sbjct: 4   LLKILLITLFAIIVLLAIAVFVITQVIDPNEFKPEIEKQAQEQANLTLDIQGDLAWQFWP 63

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              V          +D    + ++  S+    LPLL G++ +  + +    +N      G
Sbjct: 64  SLGVSLGRTEARIADDEELFAALDEASVSVAVLPLLYGQVEMDGITLAGLDVNLVDGPDG 123

Query: 121 VSNWFQRKSTMDMIH-----------------NVILEKIHVKGGRIKIIDQESDQVYFLS 163
            +       T                       + + K+ V  G+++  +        + 
Sbjct: 124 ANWEQIGPQTPAEDTATEEEPAAEEDSTSLDIPLTIPKVVVSDGKVRYRNTADGTDIIVE 183

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ- 222
             NL      L+   PL + S++    ++   + +          N       ++L    
Sbjct: 184 HFNLNAQDVNLDEPFPLQM-SLRYQDQSDMRVDMNLDTVLAADIDNNHFVLNPMTLDANI 242

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                 P+ + L  NL  N  +   S    +          + +   + L+G+ ++S   
Sbjct: 243 AGATTMPVDVHLEQNLDVNLNEDTVSIKDLLLQAAGTET--KGNVDITALTGDMQLSGKL 300

Query: 283 VRIS 286
               
Sbjct: 301 ATAP 304


>gi|294013437|ref|YP_003546897.1| AsmA protein [Sphingobium japonicum UT26S]
 gi|292676767|dbj|BAI98285.1| AsmA protein [Sphingobium japonicum UT26S]
          Length = 722

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 57/387 (14%), Positives = 120/387 (31%), Gaps = 35/387 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-F 61
           R +L  +G LF++ L+   T   F      +  FER     + + + V G  +++  P  
Sbjct: 41  RILLWIVGILFALWLILFITKGRF-----LKHPFERMLGSRLERTVRVGGDFQLYFDPIA 95

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYLSS 118
                + + I            + + +  R   L L+ G+  ++  + +    ++   S 
Sbjct: 96  IKFRAEHMAIANTPWASRPDFFRADLIDSRIAPLSLMFGDKYKLGWLELRNAAVDLEWSR 155

Query: 119 KGVSN---WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
            G SN   +       + ++  ++ +  + G  ++  D             +Q++A    
Sbjct: 156 DGRSNTWTFGDPDRKGEPLNLPLIRRALLAGTTLRYRDPR-----------MQLAADLGF 204

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK-AISLKIQLFPLAYPIIIDL 234
                      G V   GTG    +R   +     P +       ++ L   A   ++++
Sbjct: 205 ETVKARDTRFAGDVRFSGTGTMRARRFTLRGGLLSPDETGTGGRNQLALQAEAGATVLEV 264

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYK 289
            G L    +           G     L   L          R +     + G  R +  K
Sbjct: 265 SGTLPGATEIEGADLRLLAHGPNLARLFDFLGVAIPETRAYRFTSALTKAGGEWRFTHLK 324

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349
            +    +       +  VS   ++ L    + A    D+ +   F   + +      K  
Sbjct: 325 GRFGDSD----LAGRLTVSL-PDDRLLLKADLATQSLDIIDVGPFIGYDPERLARQGKAG 379

Query: 350 DIQYSVNK-KEEKDNSHDKENQENFSG 375
            I+      +   D     E   NF  
Sbjct: 380 AIRTVGGAPRILPDAPLRVEALRNFDA 406


>gi|242280360|ref|YP_002992489.1| AsmA family protein [Desulfovibrio salexigens DSM 2638]
 gi|242123254|gb|ACS80950.1| AsmA family protein [Desulfovibrio salexigens DSM 2638]
          Length = 723

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 40/337 (11%), Positives = 103/337 (30%), Gaps = 45/337 (13%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKI 83
            I+  D++ D         G+++   G +++ + P+  V    I +             +
Sbjct: 29  LINPNDYKGDIADAVRDKTGRELVFDGDLELSVFPWIGVKTGGISLSNAAGFSEKNMFSL 88

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH-------- 135
           +   +  + LPL+SG++ + ++ +    L    +  GV+NW                   
Sbjct: 89  KSADVSLKLLPLISGKVELKNVDVVDLQLFLMRNKAGVTNWDDLTGDKKSKPEEPKKSSP 148

Query: 136 -----NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                N+    ++++  R+   D++ D    + D ++ +           ++  +  S  
Sbjct: 149 GKTELNLSAGGVNIQNARVVWDDRKEDVRQAVDDCDIIVEGFAPGSPFSFNVHVLLSSTK 208

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAIS-LKIQLFPL-------AYPIIIDLFGNLFWNE 242
            E   + +   +  K + +   K  ++  L + +             + +     L   +
Sbjct: 209 PEVKADIN---TTGKASISADFKQLSVKGLSVVVDGSGKAVPGGQGQVKVSGDAVLDMIK 265

Query: 243 KQPIY------------SGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV---RISR 287
                             G  +  G  SK +N          +    +    +       
Sbjct: 266 GSADVVGLVLDAYGMKAQGSLAAKGLNSKSMNFSGDMSIPGFNLKDTLDKMGMGVETADS 325

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
             L S+  + +    NK+     E   L  + +    
Sbjct: 326 KALTSVGMDFNYAGTNKSV----EIKDLQVNLDATTI 358


>gi|226940397|ref|YP_002795471.1| hypothetical protein LHK_01473 [Laribacter hongkongensis HLHK9]
 gi|226715324|gb|ACO74462.1| DUF748 multi-domain protein [Laribacter hongkongensis HLHK9]
          Length = 1169

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 92/265 (34%), Gaps = 14/265 (5%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68
           +G + ++ L G             R   E Q +  +G+ +++ G + +++     V   +
Sbjct: 13  VGVVTALTLAGLGVAVYLSGPLLLRGVAEEQLSEALGRPVSIGG-LTLNVF-TLGVTVGN 70

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR- 127
           ++I + +  +  ++++ L +      LL G+ R+  + +D P +     +    N     
Sbjct: 71  VQISEPDGSTPFARLDRLEVHFSPRSLL-GDWRIASLKLDTPDIRLVRFADNRFNISDLI 129

Query: 128 ---KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
              ++         L    ++ GRI + D+  +  + +  L L I         P  +D 
Sbjct: 130 ERFQTPSGEPVLFALANARIRHGRIVLDDRPLNHQHTIDRLQLTIPYVS---NFPADLDV 186

Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PIIIDLFGNLFWNEK 243
                  E + + + K  +    ++    ++   + + L  +   P++  L  +L     
Sbjct: 187 STQP---EFSASINGKTVSLAGNSHVFRADRQTVMNLYLDGVDLAPMLAYLPVSLPVKIP 243

Query: 244 QPIYSGVFSVAGDFSKLLNLELSAK 268
                    +A          L   
Sbjct: 244 SVRLDTRLRIAYSTPPKSIPSLDIS 268


>gi|94265676|ref|ZP_01289416.1| AsmA [delta proteobacterium MLMS-1]
 gi|93453803|gb|EAT04172.1| AsmA [delta proteobacterium MLMS-1]
          Length = 999

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 46/337 (13%), Positives = 104/337 (30%), Gaps = 53/337 (15%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKI 83
           FID    +E          G+++ + G ++  + P   +    I +    D       ++
Sbjct: 44  FIDPNKQKERIAAMVYEQTGRELRIDGELEWGLWPRLRLAGDSITLGNAPDFGPEPFLEL 103

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW------------FQRKSTM 131
           +  S+     PL+  E+R+  + +   HLN   +++G+ NW                 + 
Sbjct: 104 DSFSLAVATWPLIRSEVRLDLVEVSGLHLNLARNAEGIGNWEDLAGEPEPTAKPAAPGSP 163

Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA 191
                + L  + ++  R+   D+ S Q   + DLNLQ  A  L     + +D        
Sbjct: 164 LPFAALALGGVDIRDLRVDWHDESSGQRAAIYDLNLQTGALNLGEPIEMELD-------- 215

Query: 192 EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
                                       +             L G L ++ +   Y+   
Sbjct: 216 ---------------------------FQAASNQPDLAASGQLQGTLVYDLRGRHYALQP 248

Query: 252 SVAGDFSKLLNLELSAKKSRLSGNFKISDGN--VRISRYKLQSILP--NSSTDEDNKTKV 307
             A        +     +  L G F++ +     R+  ++L  +     ++ + D     
Sbjct: 249 LHASLDLSGPTVPGGQAELTLRGLFELDEKAGLARVDDFRLAGLGMLVGATMEMDGLHTD 308

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344
                  +    N    + ++ E+   ++     +  
Sbjct: 309 QPGCRGEIQADINDLVRVLEIFESPLAQQLSGVRERT 345



 Score = 37.2 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 35/343 (10%), Positives = 88/343 (25%), Gaps = 27/343 (7%)

Query: 21  FTVPLFIDWTDFREDF-ERQATLIVGKKIAVKGGIKIHILPFPSVFFKD-IRIDQKEDGS 78
            T+    D    +     RQ    +     + G ++   L       +  ++    +  +
Sbjct: 346 VTLASTFDANPAQGRILVRQLEARL-LGTTINGHLEATELGAVHPQVEGQLQAKGPDLPA 404

Query: 79  FESKIEGLSMRAEFLPLLSG-------------EIRVFDMYIDQPHLNFYLSS-KGVSNW 124
             +    L+  A+   L                +       I  P+L     + +  S+W
Sbjct: 405 LLAVAARLTPGADLANLPRALNGLRDRSLLMEADFASDQDEIVIPNLRLRGLATELTSDW 464

Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKIIDQE---SDQVYFLSDLNLQISARFLNIISPLS 181
             R    D      + ++      + +               D         L  ++   
Sbjct: 465 RLRDPLGDKPQIKGVWRLAGDDLPLLLRLASVFNGGPEQQAKDAGQPQPGPELWAMAQRV 524

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            ++           + D      ++ A   A    + +K +L         D    L   
Sbjct: 525 AEAGHNDFNFSSRLDLDLAAQRARVDALQAALLG-LEIKAELAASQIKEAADFDLELAVA 583

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
              P    +  +        +   + ++  ++     S   + I   K+Q       +  
Sbjct: 584 PFNPRQ--LLEILALEPPPTSDPRALRRLAINARAGGSLAQIDIEPLKVQL----DDSQL 637

Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344
             + +++      L F+ N  +   D       E+     +  
Sbjct: 638 TGQLRINNLNATDLAFTLNIDQLDLDRYLPPEAEKVPATPETA 680


>gi|254252293|ref|ZP_04945611.1| hypothetical protein BDAG_01514 [Burkholderia dolosa AUO158]
 gi|124894902|gb|EAY68782.1| hypothetical protein BDAG_01514 [Burkholderia dolosa AUO158]
          Length = 797

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 60/188 (31%), Gaps = 16/188 (8%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIR 70
             +  DW   +     Q +  +G+  A+ G +K+              LP+P +    + 
Sbjct: 49  FLVTFDWNRAKPWVNEQVSEALGRPFAINGDLKVDWRRPAGETGWRAWLPWPRLSATQLE 108

Query: 71  IDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128
           I   +         ++        LPLL+ EI +  + +  P ++    + G + W  + 
Sbjct: 109 IGNPDWAKAPKFVTLDAAHFDVAILPLLAHEIVIPSIDVVNPTVDLERLADGRNTWTFQF 168

Query: 129 STMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186
                     V L+      G +   D  +     ++   L       +++      S+ 
Sbjct: 169 RHGAQPSRWKVRLDSFGFAKGTVTYRDAITKADLTIAIDTLGQPIPLGDVLKEQERKSLA 228

Query: 187 GSVIAEGT 194
            S    G 
Sbjct: 229 ASTERVGK 236


>gi|257095464|ref|YP_003169105.1| hypothetical protein CAP2UW1_3926 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047988|gb|ACV37176.1| protein of unknown function DUF748 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 1109

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 49/355 (13%), Positives = 114/355 (32%), Gaps = 40/355 (11%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++     LG +  V+++GA      +     +     + + ++ + + V+    I I P+
Sbjct: 1   MQTRKYALGAMLVVLVIGALG--FLVLPPLVKTMLVDKLSEVLHRPVTVQ---SISINPY 55

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             SV    + I +K  G   +  + L +  E      G   + ++ +  P       + G
Sbjct: 56  TLSVQVAGLAIQEKGGGETVAGFDSLYVNVESSSFFRGGPVISELRLVGPVFRIVRLTDG 115

Query: 121 VSNWF-------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
             N+         R ++ D      +  I + GG+I++ D+   + + +SD+N+ +    
Sbjct: 116 RLNFSDLIDEFIARPASDDPTPAFSVNNIQISGGKIELDDRALAEKHLISDVNIALP--- 172

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
                     + +  V    + + D      +  +   A +    L + L  +     ID
Sbjct: 173 ---FISSLPTATEIFVEPAFSASIDGSPLVVQGKSKPFATSLESELALDLRDVQLAKYID 229

Query: 234 -----LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
                L   +            F   G     L L  S     +          + + R 
Sbjct: 230 YSPVRLPVQVVSGALDSDLKLHFQRHGSGHSALALSGSFVIRDVDVKDSAGAPLLSLKRL 289

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH------DLNETDFFEEE 337
           ++ +   +       K  +          + +  +          +N  +FF +E
Sbjct: 290 EVLAGTLD---PLGGKYAID-------RVTVDSPDIHARVSRQGAINWIEFFSQE 334



 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/325 (10%), Positives = 87/325 (26%), Gaps = 34/325 (10%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           S   +D+ +           ++ L + A  L  L G+  +  + +D P ++  +S +G  
Sbjct: 267 SFVIRDVDVKDSAGA-PLLSLKRLEVLAGTLDPLGGKYAIDRVTVDSPDIHARVSRQGAI 325

Query: 123 NW------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS------D 164
           NW                    +     L +  + GG ++ +D+   Q +  +      D
Sbjct: 326 NWIEFFSQELAARSASVPEAKAVPVEWSLGEARITGGAVRWLDESQVQPFNANLDGLEFD 385

Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
           L    S         ++     G  +     +            +   +   +S    L 
Sbjct: 386 LKNLDSRGTSRAQFNVAWRLEAGEWLKSAAVSIKGGLLDLAKR-DVLIEQFTLSGTRALI 444

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYS----------GVFSVAGDFSKLLNLELSAKKSRLSG 274
             A    I+ F                         +       +  +  +S   +    
Sbjct: 445 RRAANGRIEFFPTPQLKVVAASQKDPAGPWKVKVVKYRGEDLGVRFEDAAVSPAATHTLA 504

Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS-QDEENLLNFSENGAESMHDLNETDF 333
              +   N+        ++      +   +  VS   +   L           +L     
Sbjct: 505 GMNLEAENLSTEPGNTATLAIRGKLNRKGEVAVSGTAKILPLAMDLKVDARTLELLPL-- 562

Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKK 358
            +    +  N ++ +  +  S + +
Sbjct: 563 -QPYFTERLNIEVTRGQVTMSGDVQ 586


>gi|90425426|ref|YP_533796.1| AsmA [Rhodopseudomonas palustris BisB18]
 gi|90107440|gb|ABD89477.1| AsmA [Rhodopseudomonas palustris BisB18]
          Length = 649

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 50/340 (14%), Positives = 109/340 (32%), Gaps = 31/340 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LRR+ + +  L  +  +        +D    R+  E Q   + G ++AV G I + + P 
Sbjct: 9   LRRLGMSVAALLGLAAIALLATSGLLDREALRDAVEAQIRAVSGLELAVNGTIDVSVFPA 68

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             V F D+ +          +   L+     LPLL     + D+ + +PH+    ++ G 
Sbjct: 69  SHVSFHDVDLKTPNTDGPALRAAVLTANLRLLPLLLRRFEIADLVLSRPHIRVIRAADGS 128

Query: 122 SNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
           SNW        +       + +   +I ++ G I  +D+ +     +  ++L        
Sbjct: 129 SNWTPFVETLTQTMQPGADNQMSFSEIRIEDGEINYLDEANHLSETIGKIDL-------- 180

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPIIIDL 234
               L+  SI  +  A G  ++  +R    I+ N      +     ++      P+ +  
Sbjct: 181 ---SLAWPSISRTFAATGQFDWRGERIDGSISVNDFLAALSGERSGLKARIAGAPMKLAF 237

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSK--------LLNLELSAKKSRLSGNFKISDGNVRIS 286
            G +  N    +  G  S  G   +                    L     +   ++ ++
Sbjct: 238 DGAIA-NRASLMLEGTLSADGVSLRNALRWVGQEPPGGGGFGPFALRARASVVGPSMAMT 296

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
              ++          +       +    L  +        
Sbjct: 297 NVNIEL----DKNVAEGVITYVNNGRPSLQATLAAGALDF 332


>gi|330870713|gb|EGH05422.1| AsmA family protein [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 243

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 23/193 (11%), Positives = 62/193 (32%), Gaps = 25/193 (12%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KE 75
           +   F +    D  D++++  + A      ++ + G I   + P+  +   D  +     
Sbjct: 12  VALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWSLFPWLGLELHDAHVATLTA 71

Query: 76  DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--------- 126
                + ++ L +    LPLL  ++++ D+ ++  +L  +    G  NW           
Sbjct: 72  PDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLALHRDENGHGNWEDIGKPAVATT 131

Query: 127 ---------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
                          +         + ++ + V   R+   D    + +    + L    
Sbjct: 132 AAPGEPTPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYSDARKGRTFTAESIQLSTGP 191

Query: 172 RFLNIISPLSIDS 184
                  P+ + +
Sbjct: 192 IREASDIPIKLTA 204


>gi|254473244|ref|ZP_05086642.1| AsmA family protein [Pseudovibrio sp. JE062]
 gi|211957965|gb|EEA93167.1| AsmA family protein [Pseudovibrio sp. JE062]
          Length = 995

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 100/313 (31%), Gaps = 25/313 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R L+  G L ++V+ G    PL +     +           G K+ + G   + +LP 
Sbjct: 1   MKRSLLIFGALAALVVCGLVLAPLLVPQKQLKAQIAETFETATGWKLRLDGRTSVDLLPT 60

Query: 62  PSVFFKDIRIDQ--KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            ++  +++ +    + DG   +++E        L LL+G   + ++ + +P        K
Sbjct: 61  LAIEIENVGVAGVARADGIEFARVEKARFELNSLRLLTGGNIIRNIELVEPTWTLEFDQK 120

Query: 120 GVSNWFQRKSTMDMIH-----------------NVILEKIHVKGGRIKIIDQESDQVYFL 162
           G ++W  + +                        + L+ + ++ G +   + +       
Sbjct: 121 GGASWQPQLANAKEGEASLVAANIAGRVASFMQQLDLDTVGIQRGVVSYSEPDQAAPLVF 180

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
           SD++L ++              ++G       G   +  +  +  A     +     + +
Sbjct: 181 SDIDLTLNFESGGDALTAEGAFVQGDEQYAVGGRVGSVTALSEARATSVEAHLVGPAQEK 240

Query: 223 LF-PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281
           +             G L  + + P  + V +                 + L    +    
Sbjct: 241 IGFNGQLAFGARPVGTLQVSVELPDLAAVAAQHEAKLPEA-----VGSAALMTELQFRQR 295

Query: 282 NVRISRYKLQSIL 294
            VR     + +  
Sbjct: 296 GVRTKDLSITAGS 308


>gi|295135567|ref|YP_003586243.1| asmA family protein [Zunongwangia profunda SM-A87]
 gi|294983582|gb|ADF54047.1| asmA family protein [Zunongwangia profunda SM-A87]
          Length = 899

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 50/394 (12%), Positives = 117/394 (29%), Gaps = 49/394 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI 58
           +++V   +G    V++V     P            E      +   +  K     I + +
Sbjct: 1   MKKVFKIIGITLLVIIVLLIAAPFLFS-----SQIENFVKKTINNNVNAKVEFADIDLSL 55

Query: 59  ---LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSG---EIRVFDMYIDQP 110
               P  +V   D+ +       G   + ++ ++++     L  G     R+    ++  
Sbjct: 56  FRSFPQATVVLSDVSVINNAPFEGDTLADVKEVTLQMSIKELFKGSEEPKRIDQFKVNDA 115

Query: 111 HLNFYLSSKGVSNWFQRK-----------STMDMIHNVILEKIHVKGGRIKIIDQESDQV 159
           ++N  + S G +N+   K           +      ++ L+   +   R+   D  +   
Sbjct: 116 YINILVDSLGRANYDIAKIDTTATTTGTPADTTGGFSLDLQHYEINNSRLHYKDVGAKMA 175

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218
             L +LN Q +  F    + L  D+    S   +     +  +           +N   +
Sbjct: 176 LKLEELNHQGTGDFSLDQTELDTDTEAIVSFEFDSINYLNKNKVDLDAVIQMDLENMKYT 235

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS------AKKSRL 272
             ++       + +   G +  +         F       K     +        +    
Sbjct: 236 F-LENEAHINQLPLTFNGFVQVDGDDTNIDLTFKTPSSDFKNFLAVIPEVYAKNIENVET 294

Query: 273 SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE--NLLNFSENGAESMHD--- 327
            G+F +           +     N         KV+ +       +  ++  +   D   
Sbjct: 295 KGDFVVDG---------MIKGTANDKYIPKLDIKVTSNNASFKYPDLPKSVQDINLDLRV 345

Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361
           LNET   E+     KN   + D  +++ N   + 
Sbjct: 346 LNETGIVEDTYLTFKNVKFRIDQDRFAANGSVKN 379


>gi|253995403|ref|YP_003047467.1| AsmA family protein [Methylotenera mobilis JLW8]
 gi|253982082|gb|ACT46940.1| AsmA family protein [Methylotenera mobilis JLW8]
          Length = 900

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 57/370 (15%), Positives = 102/370 (27%), Gaps = 37/370 (10%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEG 85
             +  D++    +       + + ++G IK+   P        + I +       + I+G
Sbjct: 29  TFNPNDYKPLIIKLVQEKKQRTLHLEGDIKLAFWPKIGADLGKLSISEHNSEQTFASIQG 88

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH---NVILEKI 142
             +    LPLL  E+ V  +YID    N      G +N+    S  +         ++ +
Sbjct: 89  AKVALALLPLLKKELVVDTIYIDGAQANIIKYKDGTTNFDDLLSKDEEESEQIKFDVDGV 148

Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID--------SIKGSVIAEGT 194
            V    +   D+ +   Y LS  NL      L     L+ D        ++   V  +G 
Sbjct: 149 KVTNSAVTYSDEGTGAKYALSKFNLSAGHVALAQPFDLATDFSATANQPAVAVDVKLKGN 208

Query: 195 GNFDNKRSAFKITANFPAKNKAI----------SLKIQLFPLAYPIIID-LFGNLFWNEK 243
              D +   F            +          S  +   P     +ID L   L     
Sbjct: 209 FLADPEAKHFAAKGLDATIKGDVAGGKDVTVSMSGDVDAKPETREFLIDSLKLALTGQFD 268

Query: 244 QPIYSGVFSV--------------AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
               +   +                           S K + +  + K S   ++ S   
Sbjct: 269 GAKVALDLNAPALVAQKDEVTSKKISVSLSQEKASDSFKANLVLADIKGSPKALQSSGIS 328

Query: 290 LQSILPNSSTDEDNKTKVSQ-DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
                       + K           L F         D+ +        K N +  L  
Sbjct: 329 GDISGTQGKRSINGKFSSPFQGNLESLIFDLPKFAGNIDIKDPAIPNGSAKVNFDLSLHA 388

Query: 349 DDIQYSVNKK 358
           D  Q  V+ K
Sbjct: 389 DAEQEQVHSK 398


>gi|83858631|ref|ZP_00952153.1| putative AsmA protein [Oceanicaulis alexandrii HTCC2633]
 gi|83853454|gb|EAP91306.1| putative AsmA protein [Oceanicaulis alexandrii HTCC2633]
          Length = 675

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 49/351 (13%), Positives = 115/351 (32%), Gaps = 38/351 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+LI L  L  +V+  A   P  +     RE  E  A   +G+++ + G I++ +LP 
Sbjct: 1   MRRLLIALLVLVILVIGVAVLAPALVPTDLIRERTETAAQEALGREVTLAGDIRLQVLPQ 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V   D RI   E       ++++ + +    +PLL  +I + +  +  P +    +++
Sbjct: 61  LQVRANDARIANAEGFGEEPFAEMQEMRVAVALIPLLQRQIEIEEFVLVDPVIRLQSNAR 120

Query: 120 GVSNWF---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
           G +  F                ++    +        + ++ G +   D    + +   +
Sbjct: 121 GNNWTFGDNTEAVAQATPEEGFQRQPGALPFEASFGDVRIENGAVTFDDGVQTRRFDALN 180

Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEG-----TGNFDNKRSAFKITANFPAKNKAISL 219
           L++ + +    +    S ++    +          G F+ + + F  T N P  +  +  
Sbjct: 181 LSIDLPSVDQPVRLRGSFEADGRPMNFNAELGSLRGFFEGRETPFSTTLNGPLADLTLEG 240

Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
           +  L         D+   L                  F +       + +  L    ++ 
Sbjct: 241 RF-LESTELAFDGDMDVTLPLRALARYLGADLPDGDIFRQFSARSAVSGEPGL---LRLR 296

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330
           +  +       Q               ++         +   + +M DL  
Sbjct: 297 EARISFDDIDAQ-----------GAMTLNYGGARP-RITGELSTAMLDLTP 335


>gi|254427527|ref|ZP_05041234.1| AsmA family [Alcanivorax sp. DG881]
 gi|196193696|gb|EDX88655.1| AsmA family [Alcanivorax sp. DG881]
          Length = 736

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 49/359 (13%), Positives = 112/359 (31%), Gaps = 28/359 (7%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +L+ +LI L  +  ++ +  F +   ID  +F+ + E+QA       + ++G +     P
Sbjct: 4   LLKILLITLFAIIVLLAIAVFVITQVIDPNEFKPEIEKQAQEQANLTLDIQGDLAWQFWP 63

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              V          +D    + ++  S+    LPLL G++ +  + +   ++N      G
Sbjct: 64  SLGVSLGRTEARIADDEELFAALDEASVSVAVLPLLYGQVEMDGITLAGLNVNLVDGPDG 123

Query: 121 VSNWFQRKSTMDMIH------------------NVILEKIHVKGGRIKIIDQESDQVYFL 162
            +       T                        + + K+ V  G+++           +
Sbjct: 124 ANWEQIGPQTPAEDTAAEEEPAAEDEGSSSLDIPLTIPKVVVSDGKVRYRSTADGTDIVV 183

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
              NL      L+   PL + S++    ++   + +          N       ++L   
Sbjct: 184 EHFNLNAQDVNLDEPFPLQM-SLRYQDQSDMRVDMNLDTVLAADIDNNHFVLNPMTLDAN 242

Query: 223 -LFPLAYPIIIDLFGNL--FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
                  P+ + L  NL    NE       +   A       N+++SA    +  + K++
Sbjct: 243 IAGATTMPVDVHLEQNLDVNLNEDTVSIKDLLLQAAGTETKGNVDISALTGDMQLSGKLA 302

Query: 280 DGNVRISRYKLQSILP-----NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
                 ++             +S          +   E   +   +      D +    
Sbjct: 303 TAPFDANKVLEAIGEAPIETTDSQALSKIALDATLGGEPG-SVMASPLTLTLDDSTLSG 360


>gi|170726960|ref|YP_001760986.1| AsmA family protein [Shewanella woodyi ATCC 51908]
 gi|169812307|gb|ACA86891.1| AsmA family protein [Shewanella woodyi ATCC 51908]
          Length = 606

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 41/333 (12%), Positives = 107/333 (32%), Gaps = 23/333 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFT-VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           ++L     +F ++       + L  D  DF+ +         G+ + ++  +     P  
Sbjct: 2   KILKWFFIVFLLLFTSLIAYLTLIFDPNDFKPELVDAVKEKTGRDLVIENDLSWTFFPSI 61

Query: 63  SVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            +    I +            K+  +      +PL S E+ +  + +D   +N      G
Sbjct: 62  GIELSQISLSNPTGFDAASMLKVNNVVAEVALMPLFSKEVEIAQLNLDGLTVNLETRKDG 121

Query: 121 VSNWF--------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
            +++                 K+    + ++ +  I +    I + D  +      +   
Sbjct: 122 QTSFDGLDGGASQTKAADTDTKAGGAQLASLDIGGIAITNTTITMTDAIAGTEQVFTMDK 181

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
           L +    L   +PL+ +      + + T     +       +    + K + ++  +   
Sbjct: 182 LTLGEFSLGKFAPLAYELTAE--LPDMTLTSQGEGMIKIAPSMQAVELKDLKIESSVIGE 239

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK-KSRLSGNFKISDGNVRI 285
             P    L   L    +  +   +  V+ D   + +++ S + K           G + +
Sbjct: 240 GIPNQ-KLDTQLLAQIQLLLDKKLLEVSLDELAVADIKGSGEVKVAYGSKVPNIHGQLDL 298

Query: 286 SRYKLQSILPNSSTD--EDNKTKVSQDEENLLN 316
               L + +P       + N  + S ++E  L+
Sbjct: 299 GDINLDTFMPADKATEEKSNSPQASSNKEPDLS 331


>gi|325523839|gb|EGD02072.1| AsmA family protein [Burkholderia sp. TJI49]
          Length = 771

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/337 (10%), Positives = 100/337 (29%), Gaps = 42/337 (12%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIR 70
                DW   R   + + +  +G+  A+ G + +              +P+P+   ++I 
Sbjct: 28  FIFTFDWNRARPMVDDKVSAAIGRPFAINGDLTVRWHRATGETGWRAWVPWPTFAARNIT 87

Query: 71  IDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128
           I   +     + + ++ +  + + LPLL+ +I +  + +  P ++    + G +NW  + 
Sbjct: 88  IANPDWAKQRYFATLDQIDFQVKLLPLLTHDIVIPTINLVSPSVDLERLADGRNNWTFKF 147

Query: 129 STMDMI--HNVILEKIHVKGGRIKIIDQESDQV---------YFLSDLNLQISARFLNII 177
            +        + L  I +  G I + DQ+   V         + +    +          
Sbjct: 148 KSSAHPLAWKLDLHDIRLDKGDIALSDQQKGLVMQATVNTLGHAIPIGEVLKQQESKARS 207

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
           +       +G+             ++    A     +            A     +    
Sbjct: 208 ASAETVGKQGAQQLSRQARAAASAASAASAAPASTASGGQPAASGTTASAAQQKSEPQYG 267

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI------------SDGNVRI 285
           + W           S +G    +L L+ +++   +  + +                ++  
Sbjct: 268 IGWTVTGSYRHSALSGSGKLGGVLALQDASRPVPVQADVRAGDLHVALVGTVTDPAHLAA 327

Query: 286 SRYK--LQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320
              +  LQ    +          ++  +        +
Sbjct: 328 VDLRLWLQGSSLDRLYQLTG---ITLPQTPPYATEGH 361


>gi|146300930|ref|YP_001195521.1| AsmA family protein [Flavobacterium johnsoniae UW101]
 gi|146155348|gb|ABQ06202.1| AsmA family protein [Flavobacterium johnsoniae UW101]
          Length = 1090

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 69/427 (16%), Positives = 141/427 (33%), Gaps = 52/427 (12%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVP---LFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           M+++ L     +F+ + +    V     +I   +  +  E  A   +  ++     I + 
Sbjct: 1   MIKKFLKKAAIVFAALFLLLILVLTIVPYIFKDEITDKIESIANENLNAEVRFD-EIGLS 59

Query: 58  IL---PFPSVFFKDIRIDQKE---DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111
           +    P   V+ K++ I  K+     S   K E  ++   F  LL G+I +  +Y+D   
Sbjct: 60  VFKHFPALIVYAKNVNIVNKKVQFTSSNIVKAETAAVGVNFYSLLKGKIILDAVYLDDAD 119

Query: 112 LNFYLSSKGVSNWF---QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
           LN  +  KG +N+      KS+        ++K+ V    I   D+ +   + + DLN +
Sbjct: 120 LNLEIDPKGNANFNIIKPSKSSDTTQTEFKIKKVVVNKTNISYNDKSALLKFKVQDLNYK 179

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
            +      I  L+ +    +      G    +              KA+  K +   +  
Sbjct: 180 GTGDLSADIFDLNSNVKIKTFDFSLNGVDYVRSKPINAEIVTYIDAKALKFKFERNVIRI 239

Query: 229 P-IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL--------------------------- 260
                   G+  + +    +           +                            
Sbjct: 240 KNFPFSFNGHFAFIKGGYDFDLRMQSKNSTLEEMLSLVPPAYDQWREQMTITGNIDFRIF 299

Query: 261 ---LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317
                ++  ++K  +S + +I++G +   + K     P    +   K +V   + N L F
Sbjct: 300 ARGKYMQDQSEKPVVSADLQINNGTIAYKKIK----EPLKDINISAKAQVRDLDINKLKF 355

Query: 318 SENGAESMHDLNET--DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN--QENF 373
             +      D  +T   F  E  KK K     K D+  +  K+    N +D       + 
Sbjct: 356 DLDNLSFNLDKKKTTASFHSEGFKKLKIKTAVKADLDAAKFKEALNLNQNDIRGNIALDL 415

Query: 374 SGDKMIL 380
             D + L
Sbjct: 416 KADGIFL 422


>gi|163796885|ref|ZP_02190842.1| hypothetical protein BAL199_29585 [alpha proteobacterium BAL199]
 gi|159177874|gb|EDP62423.1| hypothetical protein BAL199_29585 [alpha proteobacterium BAL199]
          Length = 616

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 90/278 (32%), Gaps = 27/278 (9%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--E 80
               +D   ++++         G+ + + G + +  LP PS+    +RI   E G+    
Sbjct: 24  FVATLDLNAYKDEVRAVLEDATGRHVEIAGPLDVSWLPLPSLTASGVRIANAEWGTDPAM 83

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----FQRKSTMDMIHN 136
             I  L++  +  PLLSG++ V  + +    +       G  NW        S       
Sbjct: 84  VTIGRLAVDVDVAPLLSGDLVVRGLTLADVQVRLERGPDGQPNWIVEGSPAGSASGRPAM 143

Query: 137 VILEKIHVKGGRIKIID--QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
             + ++ +    +   D  +  ++V+ +  L L        +   L  D     +   GT
Sbjct: 144 PDIRQLDLTDVTVIWRDGPKAPERVHHIKRLTLDGKGPNAPLTMTLLADLDGEVLELTGT 203

Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL------FGNLFW--NEKQPI 246
                           P  +  + ++      A  ++  L       G L     E    
Sbjct: 204 L-------PTLAEIGRPGADLPVDVEGTFAGSALALVAKLQSTRGPKGALSGVRAEGLSA 256

Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
             G  +V G       ++LS  + R+    +    ++ 
Sbjct: 257 TLGELAVTG----TAAVDLSKARPRIEARLEAKTVDLA 290


>gi|296114940|ref|ZP_06833586.1| AsmA family protein [Gluconacetobacter hansenii ATCC 23769]
 gi|295978498|gb|EFG85230.1| AsmA family protein [Gluconacetobacter hansenii ATCC 23769]
          Length = 827

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/324 (12%), Positives = 97/324 (29%), Gaps = 41/324 (12%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           + R +L+    +  V   GA  +   +D    R           G+++ + G +++H+ P
Sbjct: 7   LRRGLLVSAAAIIVVAGGGALALRGILDPQALRARAIAAIERQTGREVTL-GAMEVHVFP 65

Query: 61  FPSVFFKDIRIDQ--KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
             ++   DI +      DG+       +      + LL   I++ ++ +D P L+    +
Sbjct: 66  A-AISVHDIALADMKGGDGTPMFSARAMDASVGLMALLYHRIQLDNITLDHPVLHLRRDA 124

Query: 119 KGVSNWFQRKSTMD-----------------MIHNVILEKIHVKGGRIKIIDQESDQVYF 161
            G +NW    +                       +V L  + V    +   D+ S     
Sbjct: 125 DGQANWRMTPNRAQAADATPAPVRPVAPAAGNPWSVQLGSLRVSDATVGWDDRLSGMKTQ 184

Query: 162 LSDLNLQISARFL-NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
           L+  ++++           ++      +    G            I+     ++    + 
Sbjct: 185 LALGHVRVDGLNGARPTFDVAGTRDGAAFTLSGH--------TGAISLTHVGQDAKWPVH 236

Query: 221 IQL---FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
            +L           + + G +   ++   Y             L   +        G + 
Sbjct: 237 FELAFADHQQPAGHLTVDGTVADPDRARGYDLKLDGTLSRLVDLAPWV--------GGYD 288

Query: 278 ISDGNVRISRYKLQSILPNSSTDE 301
           + D        ++      + T+ 
Sbjct: 289 LPDARDVALSLRIVDGSTPADTNI 312


>gi|152994788|ref|YP_001339623.1| AsmA family protein [Marinomonas sp. MWYL1]
 gi|150835712|gb|ABR69688.1| AsmA family protein [Marinomonas sp. MWYL1]
          Length = 745

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/430 (12%), Positives = 134/430 (31%), Gaps = 79/430 (18%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R+ + L  L +++ +    + LF++  DF+++ +  A       + + G I     P+
Sbjct: 4   IKRLSLFLAGLVAILAILLAYIMLFVNPNDFKDELKSVALEKANVNLRLDGDISWSFFPW 63

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             +  +DI +    D     + +        LPLL  +I+V  + +     +   +++G 
Sbjct: 64  LGLGLEDIGVSIGSD-PEILQFDRAEFGLAILPLLKQKIQVDKVNLVNLKASLNKNAQGQ 122

Query: 122 SNWFQRKSTMDM---------------------------IHNVILEKIHVKGGRIKIIDQ 154
            NW                                    + ++ L+++ ++  +++  D+
Sbjct: 123 GNWQLDLPDSTPAASSSIPATTASTASSTSANDTVEKLKLPDIQLDELRIENAQVQYRDE 182

Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS------------ 202
           ++ Q+   + LN+Q++    +   P+ +D        +G      K +            
Sbjct: 183 QTKQLINAT-LNVQLNDVQWDKAWPMVMDIAVTQSDLQGKSPIKAKATLNANLAVFPERE 241

Query: 203 ---------------------AFKITANFPAKNKAIS----LKIQLFPLAYPIIIDLFGN 237
                                      +    +  +     L   L      + +D    
Sbjct: 242 ALSLDSLVLSADVESELLPTSPISAKLSAANVDVDLPQENVLAEGLALSVLGVNVDAKIQ 301

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR------ISRYKLQ 291
            +    +P +S V +V     + L   L+     +S +  ++           +     Q
Sbjct: 302 AYQVLSEPQFSAVLTVGEFNPRYLMTRLNLPLPEMSDDTAMTKARANVTLEGSLDSITAQ 361

Query: 292 SILPN-SSTDEDNKTKVSQDEENLLNFSENGAESMHDL-NETDFFEEEEKKNKNDDLKKD 349
            I      T+ +    V        + S  G     D    T   + ++ K +       
Sbjct: 362 PISITIDDTNIEANAVVDLSPL-RWDVSVAGKNLDLDRYLPTPVEKGKDGKVEAIT---- 416

Query: 350 DIQYSVNKKE 359
           D+  +   + 
Sbjct: 417 DVDIAAKTES 426


>gi|167584878|ref|ZP_02377266.1| hypothetical protein BuboB_06056 [Burkholderia ubonensis Bu]
          Length = 377

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 100/291 (34%), Gaps = 28/291 (9%)

Query: 3   RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           RR+ +G+     +  L+G F  P  I     R   E+Q +  +G+   ++   +I + P+
Sbjct: 26  RRIGVGVLIFLVLFGLLGFFAAPPLI-----RHIAEQQLSRQLGRPATIQ---RIALNPY 77

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             ++    I + ++        I  L +R  +  L  G   V ++ +D P  +       
Sbjct: 78  TLNLEAGGIHLGERGGQGDFIDIGKLVVRPSWTSLFRGAPIVNEVRVDAPRFHVVRYDAQ 137

Query: 121 VSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
             N+                  +  +  I +  GRI   D+  ++ + + +  L I    
Sbjct: 138 RFNFTDLIEKFSTPSKPESKPTHFSVSNIQINDGRIDFDDRLLNEKHVVDNWTLGIP--- 194

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
                          V  +     D    + +      A+++   + ++   L  P +I 
Sbjct: 195 ---YIATLPSKTDIFVQPKLRLRLDGSPISIEGRTKPFAQSRESEIALKFDKLDVPQLIS 251

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
               +       + SG+ S +      + +  +    R+SG   ++D  V 
Sbjct: 252 ---YVPAKLPVAVTSGLLS-SNLKLNFV-MSGATPALRVSGTVDLNDAKVT 297


>gi|323698039|ref|ZP_08109951.1| AsmA family protein [Desulfovibrio sp. ND132]
 gi|323457971|gb|EGB13836.1| AsmA family protein [Desulfovibrio desulfuricans ND132]
          Length = 1050

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/380 (12%), Positives = 109/380 (28%), Gaps = 54/380 (14%)

Query: 1   MLRRVLIGLGFLFSVVLVG----AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           MLRR+   L      +++           +ID  +FR  F      ++G+ + +KG + I
Sbjct: 1   MLRRLPRILVECLVALVLVCTGLLLWASYYIDTGEFRARFTETMETVLGRSVTLKGDLDI 60

Query: 57  HILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            I P  ++  +D+ I +         +    + +    LPLLS  + V  + +       
Sbjct: 61  AIWPRLALTVEDLGIGEAPGFGDGPAAHFNDIEISVRILPLLSHHVEVEFLELKGLKGVV 120

Query: 115 YLSSKGVSNWFQR--------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
             + +GV NW           +          +  + +    +   D+ +   Y LS ++
Sbjct: 121 VRNGQGVFNWQSLVERGGQGGEGATMDGWTFAVNSVEITDAELLFRDEMAATEYKLSGID 180

Query: 167 LQISARFLNIISPLSID--------SIKGSVIAEGTGNF--------------------- 197
           +      L    P S+          IK  ++ +G                         
Sbjct: 181 IHTGNVTLGEDVPFSLSSGFSWADQGIKADLVLKGMIRVMDDGTPPVFSRTTVQAKVYGD 240

Query: 198 ----DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253
                     F    +     + ++ +  +    + +  +        +K   + G  +V
Sbjct: 241 FLPKKAAPGEFIAAVDLDWDKRIVTFE-DIRASLFGLRAEGDVTSGDLDKGLDFRGHITV 299

Query: 254 AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS------STDEDNKTKV 307
                + L    +        +   S           +    ++            +   
Sbjct: 300 HPFVPRDLIALYAPDMPVKDVDGLRSSAVASFVHVTEEGARFDNLILTLDDITVRGRCAF 359

Query: 308 SQDEENLLNFSENGAESMHD 327
           +     +L+F   G     D
Sbjct: 360 TGWTRPVLDFDLRGNTLDLD 379


>gi|90409140|ref|ZP_01217259.1| asmA protein [Psychromonas sp. CNPT3]
 gi|90309748|gb|EAS37914.1| asmA protein [Psychromonas sp. CNPT3]
          Length = 642

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/348 (14%), Positives = 121/348 (34%), Gaps = 39/348 (11%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +L        ++L+    + + ++  D++E  + QA   + +++ + G +   + P 
Sbjct: 1   MKLLLKIFISFIVLILLAMLALVMLVNPNDYKEQIQTQAKQSLNRELLINGDLSWTLFPQ 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +   +I +   +        KIE  S+  + LPLL G++++ ++ ++   LN   +  
Sbjct: 61  LGLSSGEIEVRNLDGFNRENFLKIESASLGIKILPLLKGQLKIAELNLEGFRLNIITNKY 120

Query: 120 GVSNWF--------------------------QRKSTMDMIHNVILEKIHVKGGRIKIID 153
           G SN                              K     I  ++L+ I++    ++I D
Sbjct: 121 GQSNLDNLGPQNSIEEQPESNTKQSTEVVTNNDNKEAFFDISQLVLDGININNTVLEIQD 180

Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213
            +++  + +      I  +        S DS     +       +  ++  K+T+     
Sbjct: 181 LKANSYHKV------IINKMHLGQFEFSKDSD---FVLISELLVNGTKANIKLTSVINVS 231

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS 273
                + +    L          N   N      + V+ V      L   + +     L+
Sbjct: 232 ADLTQINLNNLVLESQFSGKDIPNGAVNSTLKT-NVVYQVKSKKLTLEQFQFAVDDITLN 290

Query: 274 GNFKISDGNVRISRYKLQSILPN-SSTDEDNKTKVSQDEENLLNFSEN 320
           G   +  G++   RY L     + +     N T   ++ +N    ++ 
Sbjct: 291 GKISLQSGDITKVRYSLVGNQWDLNPYLPKNSTTTDKNIKNDSKVTKK 338


>gi|319637767|ref|ZP_07992533.1| AsmA family protein [Neisseria mucosa C102]
 gi|317400922|gb|EFV81577.1| AsmA family protein [Neisseria mucosa C102]
          Length = 697

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/385 (13%), Positives = 126/385 (32%), Gaps = 31/385 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+ ++ G+  L  +  V +  +    +  +     ++  +   G +I     I    LP 
Sbjct: 9   LKTLVFGITALLCLAAVLSALMFRIFNTENIDAFIQKNFSAH-GCQIKYNATIGRKWLPR 67

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P++  KD+ +   E  +    I    M   +  L S    +    +  P L         
Sbjct: 68  PTLILKDLSLSSSEPDTPTLNIAESKMGFGWSSLWSDAPIIEKWILLNPTLTLD---SKH 124

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII-SPL 180
                 +       +  L +I +  G I+   +E +        +LQ +           
Sbjct: 125 HLPACLQQDPSSKESFQLNRIIINNGSIRYHTKEQNIALNNLQFSLQQADSDGRPFDISG 184

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
           ++ +I   +  +G G      + + + A        + L +Q   L   +   + G+L W
Sbjct: 185 TLQNIGNPISWQGAGYLVPNNAGWSVPA--------LKLNLQTVLLKNKLDAQIAGSLNW 236

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300
             +  +    F++    S   NL ++A+   L    +  +G + ++         + +  
Sbjct: 237 QNQTALLR-DFNLQ-AESDFQNLHINARSPLL----QFKNGYLHLNTLNGALTAGSENNQ 290

Query: 301 EDNKTKVSQDEENLLNFSE-----------NGAESMHDLNETDFFEEEEKKNKNDDLKKD 349
            D   K+ +        +            +  ++    +    +++ +  +    L   
Sbjct: 291 WDGSFKLDKANLYATVLTAANFELKGSHKNDRLQTNFTFSSPLVWQKGKGIDA-PKLHLS 349

Query: 350 DIQYSVNKKEEKDNSHDKENQENFS 374
            +Q ++N+          E Q NFS
Sbjct: 350 TLQDTINRLPRPRFISTLEGQANFS 374


>gi|238783924|ref|ZP_04627941.1| hypothetical protein yberc0001_3200 [Yersinia bercovieri ATCC
           43970]
 gi|238715163|gb|EEQ07158.1| hypothetical protein yberc0001_3200 [Yersinia bercovieri ATCC
           43970]
          Length = 702

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/362 (11%), Positives = 102/362 (28%), Gaps = 62/362 (17%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRI 71
            +  DW   +     + +  + +  A++G + +              +P+P++  +D+ +
Sbjct: 26  IMTFDWNRLKPTINEKVSAELQRPFAIRGNLGVDWSRKSDEPGWRGWVPWPNIHAEDLVL 85

Query: 72  DQKE-----------------DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
                                       ++ +      L LL+ E+ +  +++ QP  N 
Sbjct: 86  GNPPELVSDKTADDKIAATAFPAGEMVTLKRVDASIAPLALLAKEVWIPRIWLTQPDANL 145

Query: 115 YLSSKGVSNW------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDL- 165
              + G +NW        ++       +V ++ I    G I + D   ++D    +  L 
Sbjct: 146 LRLANGKNNWTFNLANSPKEGEQPSSWSVNIDDIVFDRGAISLNDAMLKADLHAVIDPLG 205

Query: 166 ----NLQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITANFPA--KN 214
                 +++            DS + +        +  G +  +               +
Sbjct: 206 KPLPFAEVTGSSTEKKGQPPADSAQSNTADYVFGWKIDGKYQGQSLTGSGKMGGMLSMSD 265

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270
            +    +Q    +    + + G L               +G     L   +         
Sbjct: 266 ASRPFPLQADLRSGSTRVAVAGTLTDPGNLAGLDLQLKFSGASLDNLYPLIGVLLPATPP 325

Query: 271 -----RLSGNFKISDGNV-RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
                RL  + K +DG V R   +  +    +   +              L  + +  + 
Sbjct: 326 YNTDGRLVASLKQADGAVYRYENFNGKIGDSDIHGNLTYTAS---QPRPKLTGNMSSEKL 382

Query: 325 MH 326
             
Sbjct: 383 RF 384


>gi|146299476|ref|YP_001194067.1| AsmA family protein [Flavobacterium johnsoniae UW101]
 gi|146153894|gb|ABQ04748.1| AsmA family protein [Flavobacterium johnsoniae UW101]
          Length = 867

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/386 (13%), Positives = 115/386 (29%), Gaps = 33/386 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58
           ML+++L     +  V +   F +P        +          V  K++      + +  
Sbjct: 1   MLKKILKVTAIVLVVFVAALFAIPFLF-KDQIKAKIADAINESVDAKVSFA-DADLSLFK 58

Query: 59  -LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE---IRVFDMYIDQPHL 112
             P  +V  + + I  K    G     +  L+++     L  G+   + +  +  +   +
Sbjct: 59  NFPNAAVGIEKLVIINKAPFEGDTLVSLGELNLKMSIKELFKGKDEPLNIQGITSENGLI 118

Query: 113 NFYLSSKGVSNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
           N   +  GV N+           +K       ++ ++   ++    + IDQ S     + 
Sbjct: 119 NIIFNKDGVGNFDIALKDKKEDDKKDDKSSPLSLKIQNYKIENFTFRYIDQGSKIKMVID 178

Query: 164 DLNLQISARFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
            LN + +  F N    L   +    S+  +      N +                + K +
Sbjct: 179 SLNHEGTGDFTNSKLDLDTKTTANVSLDMDKVNYMKNIKLTLDAILGIDLDQSKYTFK-E 237

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSG---NFKI 278
              L   + ++  G +   ++  IY   F      F+  L L  SA  S L G     + 
Sbjct: 238 NKALINQLPLEFDGFIQMVKEGQIYDLKFKTPTSSFTNFLGLIPSAYASSLDGVKTTGEF 297

Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD---LNETDFFE 335
           +       +    ++   +     N                +    + D   +NET    
Sbjct: 298 TVVGFAKGKLTDTTVPAFNIAIASNNASFQYPNLPK-----SVQNIVIDTKIINETGILN 352

Query: 336 EEEKKNKNDDLKKDDIQYSVNKKEEK 361
           +          K D   +S       
Sbjct: 353 DTYVNLDKLSFKIDQDVFSAKANVRN 378


>gi|152981940|ref|YP_001353591.1| hypothetical protein mma_1901 [Janthinobacterium sp. Marseille]
 gi|151282017|gb|ABR90427.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 639

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 59/374 (15%), Positives = 121/374 (32%), Gaps = 49/374 (13%)

Query: 40  ATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLS 97
                 + + + G + + +LP+P +  +D+RI   +        + + +  R   LPLL 
Sbjct: 43  LKQNWNRDLTIGG-LSLDLLPYPRLRARDVRISNPDWAQDKYLLQADDIRARLSLLPLLR 101

Query: 98  GEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD 157
           G + V  + +    LN   +  G  +W    +         L+ +   G  I      ++
Sbjct: 102 GNVAVEGLLVKGLQLNLEEADDGRRSWEMPATRSLRTSQFDLQALRADGSTINYRTPGNE 161

Query: 158 -QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN----------FDNKRSAFKI 206
            + + +  L  +  +   N+     +   K ++  +G  +                  K 
Sbjct: 162 IKSWQVESLQARGDSGLRNMAVSGRVLRDKYALQFDGKLDDLSALGTPHAVSQGTLTLKS 221

Query: 207 TANFPAKNKAISLKIQLFPLAYPIIID------LFGNLFWNEKQP---IYSGVFSVAGDF 257
                +    + L   L    + +++D      L+G L  +   P     S       + 
Sbjct: 222 GEAQASVTGLLPLDSVLQDYDFALVVDAASMKELYGFLQIDRASPAALKASVTLQAKNNQ 281

Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRIS-------------RYKLQSILPNSSTDEDNK 304
           S   +L+L   K  LSG+ K +  N R++             +  L       S  ++ +
Sbjct: 282 SLFKDLQLQLGKLNLSGDGKWARKNDRLNFDARLQADYIDMVQTFLDLGQAPLSPKKEGE 341

Query: 305 TKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364
               +     L  + +G +   D                  LK        N K     +
Sbjct: 342 LFRDKPLAWPLLLAMDGVDGKLD-------------ATIATLKLRSGVEVANAKGTMSFT 388

Query: 365 HDKENQENFSGDKM 378
            DK N ++FSG  +
Sbjct: 389 DDKLNVQHFSGSLL 402


>gi|222055406|ref|YP_002537768.1| AsmA family protein [Geobacter sp. FRC-32]
 gi|221564695|gb|ACM20667.1| AsmA family protein [Geobacter sp. FRC-32]
          Length = 1073

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/316 (16%), Positives = 112/316 (35%), Gaps = 23/316 (7%)

Query: 3   RRVLIGLGFLFSVVLVGA---FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           + ++I   FL ++VL G    F +   +    ++E    +   ++ +++  + G+     
Sbjct: 6   KYIIIVFSFLLAIVLAGGGLSFLLDKLLHLDTYKEQILAETQRMLKRQVTYEKGL-FAFK 64

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             PS  F ++ + +K+  +     E ++ + + LPLL   + + ++ +  P +N     K
Sbjct: 65  FGPSFTFTNVIVKEKDGSNDFVSAEKITFKVDLLPLLEKRVSLHEIILSHPKINLSRDDK 124

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE---SDQVYFLSDLNLQISARFLNI 176
           GV N+       D   +V L++I V  G I   D+    S     L DL+L +       
Sbjct: 125 GVFNFDDLLEKTDSSVSVHLKEIKVDKGTINFDDRSVVPSGLTTRLKDLDLHLGNMTRGK 184

Query: 177 ISPLSIDSIKG-----SVIAEGTGNFDNKRSAFK-------ITANFPAKNKAISLKIQLF 224
              + + +  G      +   GT     +    K       I  +    ++     +   
Sbjct: 185 KCRIKLAASIGGAAPNKLSVSGTVRIARRDRPLKESIADLHIKTDNFDVSQFWPYYMAHV 244

Query: 225 PLAYPI-IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---LSGNFKISD 280
           P    +   D   N+    +     G   V+        +  +    R        +++D
Sbjct: 245 PFKKVMGRFDTDLNVKGKFEAFTSKGEVRVSSLRFDYPQVFHAVLTPRNTHFRYAMELTD 304

Query: 281 GNVRISRYKLQSILPN 296
            ++ +    L     N
Sbjct: 305 RDIAVKSINLTVDKLN 320


>gi|295676495|ref|YP_003605019.1| AsmA family protein [Burkholderia sp. CCGE1002]
 gi|295436338|gb|ADG15508.1| AsmA family protein [Burkholderia sp. CCGE1002]
          Length = 836

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 58/156 (37%), Gaps = 16/156 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIR 70
             L  DW   R   + + +  +G+  A+ G +K+              +P+P     +I 
Sbjct: 32  FVLTFDWNRARPYIDDKVSQAIGRPFAINGDLKVGWRHAVGETGWRGWVPWPRFSAANIT 91

Query: 71  IDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ-- 126
           I   +       + ++ +    E LPLL+ +I +  + +  P ++      G +NW    
Sbjct: 92  IGNPDWAKQPQFATLDEIDFEVEVLPLLTHDIVIPAINLVNPSVDLERLVDGRNNWTFKL 151

Query: 127 RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
             S+      + L  I    G I + DQ+      +
Sbjct: 152 PSSSGPSEWKLDLHDIAFAKGNITLSDQQKKVEVQM 187


>gi|329912192|ref|ZP_08275710.1| AsmA [Oxalobacteraceae bacterium IMCC9480]
 gi|327545673|gb|EGF30823.1| AsmA [Oxalobacteraceae bacterium IMCC9480]
          Length = 650

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 95/334 (28%), Gaps = 30/334 (8%)

Query: 4   RVLIGLGFLFSVVLV-GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R       L  +++   A    L  D   +    E++AT   G+ + + G + +H+LP P
Sbjct: 12  RFACISAVLVVLLVAGAALASRLLFDQPRWINWLEQRATADAGRPVHI-GALSVHLLPRP 70

Query: 63  SVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            +    ++I    D       +   +S R    PLL G++R+  +     HL    +S G
Sbjct: 71  GIDIYRLQIADPADAQAVPLVQAAQVSARLALWPLLVGQVRIAGLVAKGVHLELERNSDG 130

Query: 121 VSN--WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
           V N  W         +    L  + +    ++    + D                   I+
Sbjct: 131 VPNWRWPAAGQGAAPLDLGALTSVRISQSSVRYRSPQFDSGIT--------------QIT 176

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
            LSI S  G    E        R     +A     +   S +I L   +  +  +    L
Sbjct: 177 QLSILSEPGWRDIEVEALLRRDRRELVASARLDQLSVLPSGRITLQTGSARLSAEGRLPL 236

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAK-----KSRLSGNFKISDGNVRISRYKLQSI 293
                                L  + L A         L      S G +  S    +  
Sbjct: 237 QAVLTNAAVKLQVDAHRPNDLLAFMNLDAGLRTIAPISLHAELHESGGTLTASAIDARLG 296

Query: 294 LPNSSTDEDNKTKVSQDEE-NLLNFSENGAESMH 326
                       ++ +       +   +      
Sbjct: 297 ----DLQVTGNARLDRGGSRPTFDAQLSTPLLDW 326


>gi|110678964|ref|YP_681971.1| AsmA family protein [Roseobacter denitrificans OCh 114]
 gi|109455080|gb|ABG31285.1| AsmA family protein [Roseobacter denitrificans OCh 114]
          Length = 650

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/330 (12%), Positives = 88/330 (26%), Gaps = 40/330 (12%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIEGLS 87
                    Q +   G+ +A+ G + +   P   V   D+ +            +    +
Sbjct: 28  DRLARIATEQLSATTGRDVAINGDVALTFWPVLGVSANDLEVGNAAWAEQGPMLQAANAA 87

Query: 88  MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------------------FQRK 128
           +  + + LL G+IR+ ++    P +       G ++W                       
Sbjct: 88  IGVDVMALLRGDIRITNVEAHSPTIRLEQRLDGRASWEFTNAEDTAQITTSTDASTDAPA 147

Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188
           +  D    + +E++ V    +   D E   +  L+ ++L +                 G 
Sbjct: 148 AMADESRTISIERLSVTNATLVY-DAEGSDLVTLAGVDLALDWPDPG-----------GP 195

Query: 189 VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP-IIIDLFGNLFWNEKQPIY 247
                T    +                A   +     +A P   + L G           
Sbjct: 196 AEISATVRPADVPVRIAAQIEGFGDFIAGETRGVNATVAVPSGELSLDGRAS-TAGAVAG 254

Query: 248 SGVFSVAG--DFSKLLNLELSAKKSRLSGNFKISDGNVRIS--RYKLQSILPN-SSTDED 302
           +  FS      F   L L   A   +L     +          +  L+ ++ +       
Sbjct: 255 AVSFSAGNTEAFLAALGLPGIALPPKLGAQIDMRTDLTLTPDRQLALRDLVLDLHGNRLT 314

Query: 303 NKTKVSQDEENLLNFSENGAESMHDLNETD 332
               VS +    +N      +      +T 
Sbjct: 315 GAADVSLNGTPNVNVQLAAGDLDLRPVQTA 344


>gi|83593989|ref|YP_427741.1| AsmA [Rhodospirillum rubrum ATCC 11170]
 gi|83576903|gb|ABC23454.1| AsmA [Rhodospirillum rubrum ATCC 11170]
          Length = 737

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/361 (10%), Positives = 93/361 (25%), Gaps = 48/361 (13%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
            +L  +  L  V++V    +    D   ++     +   + G+++ + G I + +   P+
Sbjct: 6   TILKVVFGLAVVLVVAVVVLVATFDLNAYKGRLAAELGRLTGREVTIAGDIGLALSLTPT 65

Query: 64  VFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           +  + + +             ++ L  +   +PLLSG + +  + +D P +    ++ G 
Sbjct: 66  IAVEGVTLGNAAWAGSEPMVAVDRLEAKIAVVPLLSGIVSIDSLELDAPRILLATNAAGQ 125

Query: 122 SNWFQRKSTMD-----------------------------MIHNVILEKIHVKGGRIKII 152
            NW    +                                   +  +  + +    +   
Sbjct: 126 GNWALTPAAKPAAQTPPAASKSEPTPEPTPDPAAAQSTAAAPVSFDIRSVTITDALLTYK 185

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN-FP 211
           D ++                       L  +     +  +  G    +            
Sbjct: 186 DGKAG----------GPPTTLTLKSLTLLSEGAGQPLDVDLQGALGARLLGLSGKLGAID 235

Query: 212 AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS- 270
                  + + L      +   + G++    K                 L     A    
Sbjct: 236 TILAGQPMAVDLAFETDGLSGTVKGSVAEPLKGKGLDLAVVARAADLSDLAGNSVAALPL 295

Query: 271 RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330
            LS          R+    L+              ++    +  L  +   A  + DL E
Sbjct: 296 DLSTRITQDGAAYRLGDLALRLGAS----SVSGALRIDPAAKP-LAVTGVLAAPLLDLAE 350

Query: 331 T 331
            
Sbjct: 351 L 351


>gi|317405492|gb|EFV85801.1| secreted protein [Achromobacter xylosoxidans C54]
          Length = 832

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/326 (11%), Positives = 90/326 (27%), Gaps = 41/326 (12%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82
             L  D   ++   E        + + + G I++ + P   +  + + + +       + 
Sbjct: 26  FLLTFDPNAYKYKLEELVQERYHRTLTIDGEIELSLFPRIGLSVQGVSLSEANSTETFAS 85

Query: 83  IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--------------- 127
           IE   +     PLLS    V  + I            G  N+                  
Sbjct: 86  IESTRLAVAVWPLLSNSFVVDHVAISGFKARVVRDKDGQFNFSNLVGGTAPVVATPSNPA 145

Query: 128 ------------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
                                      + +  + +K G +++ DQ S     ++ +N   
Sbjct: 146 EALAGAAQTAAQALTSGTLPPSRNNMQIDIAGLDLKDGEVQLQDQMSGMAVAVTKINANT 205

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-PLAY 228
                N    + + +           N + +       +      + + L++    P A 
Sbjct: 206 GRVTFNQPFDVRLTARVEGGNPRMDANLNGQALLTLDPSAKRYAAQKLDLRMDGKLPGAQ 265

Query: 229 PIIIDLFGNLFWNEKQPIYS-------GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281
              + + GNL +N ++               V    +   N+E S    +LS +   S  
Sbjct: 266 AKSLAVRGNLAFNGQKSALDVAGLEVVFQGDVTDPAAPATNVEASVAMPKLSIDPHKSQL 325

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKV 307
            +     + +  + +   +       
Sbjct: 326 QIEKLAVRAKGGVADGPFEFAVDAPA 351


>gi|258591922|emb|CBE68227.1| conserved exported protein of unknown function [NC10 bacterium
           'Dutch sediment']
          Length = 999

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 116/359 (32%), Gaps = 36/359 (10%)

Query: 3   RRVLIGLGFLFS-VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R++LI  G +F+ ++L   F +P        R    R  +  + +++ ++   +I I PF
Sbjct: 19  RKLLIWFGAVFAAMILFAFFGLPPL-----ARSFLIRTLSETLHREVTIQ---QIKINPF 70

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             S+  + + +  +E     +  + L +  +        + + ++ +D+P++       G
Sbjct: 71  ALSLTIRGVTVKDRETPETFASFDQLFINLQSFSAFRLALILKEVRLDRPYIRIVHHQDG 130

Query: 121 VSNWFQR-------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
             N+          +          L  I + GG + +IDQ     + + D N+ I    
Sbjct: 131 SYNFSDLLGAGSSDQGGNAAPPKFSLNNIQIVGGSVDLIDQPKQTSHTVRDANIAIPFLS 190

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
                      ++ SV    +   +  + A +      A ++  +  I +  L  P  + 
Sbjct: 191 NFPHY------LETSVEPRLSATINGSQYALEGKTKPFASSRQTTFDIDIADLDIPHYLA 244

Query: 234 ---LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
              +  N      +       S      + L +E      ++S +       +      L
Sbjct: 245 YVPIEANFKIRSGKLTVKAQLSFVQHQRQTLTVEGRFALRQVSVSDAQGQPLLTFPLLDL 304

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349
                 S+        V+       + +    E     +       +    +N D   D
Sbjct: 305 ---SLASTEPLAGLFHVA-------SVTLESPELFIRRDPNGITNIQSLFPRNPDSSTD 353


>gi|323526070|ref|YP_004228223.1| AsmA family protein [Burkholderia sp. CCGE1001]
 gi|323383072|gb|ADX55163.1| AsmA family protein [Burkholderia sp. CCGE1001]
          Length = 840

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 83/265 (31%), Gaps = 24/265 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDI 69
              L  DW   R     + T  +G++  + G +K+              +P+P     +I
Sbjct: 31  VFILTFDWNRARPYVNDKVTQAIGRQFTINGDLKVGFRHAVGETGWKSWVPWPRFSAANI 90

Query: 70  RIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ- 126
            I   +       + ++ +  + + LPLL+ +I +  + +  P ++    + G + W   
Sbjct: 91  TIANPDWAKRPQFATLDEIDFQVKVLPLLAHDIVIPAINLVNPSVDLERMADGRNTWTFQ 150

Query: 127 -RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
             KS       + L  I    G I + D++         ++ QI    L    P+  +++
Sbjct: 151 LPKSKKPSEWKLQLHDIVFAKGNIALSDEQKK-------VDAQIVVDTLGKPIPIG-EAM 202

Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
           K    A    + +          +  A+ +A S        A         +        
Sbjct: 203 KQQEDASRKASAEAVGKEGAKKLSAQAEAQAASAASAASAAAASGASATDIHASGTTAAT 262

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKS 270
             SG     G           A   
Sbjct: 263 GASGGLVAGGSKGASAAERAGASTP 287


>gi|260432907|ref|ZP_05786878.1| AsmA family protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416735|gb|EEX09994.1| AsmA family protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 653

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/361 (11%), Positives = 98/361 (27%), Gaps = 19/361 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +   L  L +V  +    + L +           Q     G+ + + G +++   P 
Sbjct: 1   MKWLTRILLILIAVAGLVIGAL-LLMPGDKLARILSEQVKAQTGRDLTLSGDVRLSFWPV 59

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    +     +          + L++  +   LLSG+IRV  +  + P L    +  
Sbjct: 60  LGMETGPVAFGNAKWAGPEPMLSAKSLAIGVDARALLSGDIRVKRVLAEDPVLRLERNG- 118

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           G  NW       +            +   + +          +   N      F  +   
Sbjct: 119 GRGNWELASLDANPSPAASARTSTARPSSVILEQLGLVNARLIYIENGVTQMDFSAVDLS 178

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKI---TANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
            S   +   +  +             +        +  K   + + +      +  D   
Sbjct: 179 ASWPEVTAPMRLKAAMPVPGGTVEVSLDIPDLPTFSVGKVTPMSMAMTAPGGEVRFDGRV 238

Query: 237 NLFWNEKQPIY----SGVFSVAGDFSKLLNLELSAKKSR-LSGNFKISDGNVRISRYKLQ 291
           NL    +        S    +A      +N+     +   +SG    +    RIS   +Q
Sbjct: 239 NLAGEMEGKTLVRTKSTETFLAAFGQGGVNVPTGLGRVADISGQMAYTRDG-RISLRDMQ 297

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
            IL ++      +  ++      +    +  +       T  F        +        
Sbjct: 298 VILDHN--RFSGEADIAIGNPPQVTARLSAGDLDL----TQAFGGTSTTTPDASSTGSTP 351

Query: 352 Q 352
           +
Sbjct: 352 R 352


>gi|225075798|ref|ZP_03718997.1| hypothetical protein NEIFLAOT_00814 [Neisseria flavescens
           NRL30031/H210]
 gi|224952880|gb|EEG34089.1| hypothetical protein NEIFLAOT_00814 [Neisseria flavescens
           NRL30031/H210]
          Length = 697

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 53/389 (13%), Positives = 127/389 (32%), Gaps = 39/389 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+ ++  +  L  +  V +  +    +  +     ++  +   G ++     I    LP 
Sbjct: 9   LKTLVFSIAVLLCLAAVLSALMFRIFNTENIDAFIQKNFSAH-GCQVKYNANISRKWLPR 67

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P++  KD+ +   E  +    I    M   +  L S    +    +  P L     +   
Sbjct: 68  PTLILKDLNLSSSEPDTPTLNIAESKMGFGWSSLWSDAPILEKWILSNPSLTLGPKN--- 124

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                 +       +  L +I +  G I+  ++E  Q   L+DL   +            
Sbjct: 125 HLPACLQQNQASKESFQLNRIIINSGSIRYHNKE--QDIALNDLQFSLR----------R 172

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK-----AISLKIQLFPLAYPIIIDLFG 236
            +S        GT        +++   +    +      A+ L +Q   L   +   + G
Sbjct: 173 ANSDGRPFNISGTLQNIGSPISWQGAGHLVQDDAGWSVPALKLNLQTVLLKNKLDAQIAG 232

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
           +L W  +  ++   F++    S   NL ++A+   L    +  +G + ++         +
Sbjct: 233 SLNWQNQTALFR-DFNLQ-AESDYQNLHINARSPLL----QFKNGYLHLNTLNGALTAGS 286

Query: 297 SSTDEDNKTKVSQDEENLLNFSE-----------NGAESMHDLNETDFFEEEEKKNKNDD 345
            +   D   K+ +        +            +  ++    +    +++ +  +    
Sbjct: 287 ENNQWDGSFKLDKTNLYATVLTAANFELKGSHKNDRLQTNFTFSSPLVWQKGKGIDA-PK 345

Query: 346 LKKDDIQYSVNKKEEKDNSHDKENQENFS 374
           L    +Q ++N+          E Q NFS
Sbjct: 346 LHLSTLQDTINRLPRPRFISTLEGQANFS 374


>gi|307729613|ref|YP_003906837.1| AsmA family protein [Burkholderia sp. CCGE1003]
 gi|307584148|gb|ADN57546.1| AsmA family protein [Burkholderia sp. CCGE1003]
          Length = 857

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 16/189 (8%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDI 69
              L  DW   R     + T  +G++  + G +++              +P+P     +I
Sbjct: 31  VFILTFDWNRARPYVNDKVTQAIGRQFTINGDLRVGLRHPVGETGWKSWVPWPRFSAANI 90

Query: 70  RIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ- 126
            I   +       + ++ +  + + LPLL+ +I +  + +  P ++      G +NW   
Sbjct: 91  TIANPDWAKRPQFATLDEIDFQVKVLPLLAHDIVIPAINLVNPSVDLERMMDGRNNWTFE 150

Query: 127 -RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
             KS       + L  I    G I + D++      +    L         +      S 
Sbjct: 151 LPKSKTPSQWKLQLHDIVFTKGNIALSDEQKKVDAQMVVDTLGQPIPIGEALKQQEQASR 210

Query: 186 KGSVIAEGT 194
           K S  A G 
Sbjct: 211 KASAEAVGK 219


>gi|95929507|ref|ZP_01312250.1| AsmA [Desulfuromonas acetoxidans DSM 684]
 gi|95134623|gb|EAT16279.1| AsmA [Desulfuromonas acetoxidans DSM 684]
          Length = 798

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/349 (12%), Positives = 100/349 (28%), Gaps = 36/349 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTV-PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           + L     L   VL G   V    +     R+         + +K+ + G +++ +    
Sbjct: 7   KYLSVFALLSIFVLGGLVIVAHFLVTPERIRDAVVPVLEQKLQRKVHLAG-VEVSLFS-- 63

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            V    + +    D +     + + MR +  PLL   + + ++ I++P LN    + G  
Sbjct: 64  GVTLNHLAVVDSNDDTLLVSADKVVMRYQLWPLLLQRVVIDEVRIERPKLNVERRAGGQW 123

Query: 123 NWFQRKSTMDMIH---------------NVILEKIHVKGGRIKIIDQESDQVYFLS---- 163
           N                           ++++  +++  G +   D        +     
Sbjct: 124 NLTFLPQPAPTPKVQTASLIPSAGETGIDLLVSDLYISQGEVIFKDYTFGTPAHIYKLSQ 183

Query: 164 -DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS---- 218
            DL L   +        L        V  EG      +    ++  +             
Sbjct: 184 FDLRLGNVSFDRESSIVLWGKFNGSPVDIEGKFALGAQTFDLELVTDGLDLIPLQPYYRH 243

Query: 219 -LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL---ELSAKKSRLSG 274
            L  +L  L     + + G L    +    SG          L NL    L  ++     
Sbjct: 244 YLNGRLDGLVLDAELRVRGGLTAPVQ---VSGQLVTRDLDLVLNNLKSWPLQGRRIDFDV 300

Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
           +  +   + R+    L   +               D++ +++      +
Sbjct: 301 DLGLDAAHQRLDVAALNVDVNGIELQAQG-AVTGLDQQPVVDLKVTTPQ 348


>gi|319426191|gb|ADV54265.1| AsmA family protein [Shewanella putrefaciens 200]
          Length = 608

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/345 (13%), Positives = 117/345 (33%), Gaps = 24/345 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +   L  L ++ L+    + +F D  DF+ +         G+++ +   +     P 
Sbjct: 1   MKLIKWFLAILVTLALLVTLYLTVFFDPNDFKPEIVNAVKKQTGRELVIADDLSWTFFPA 60

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    I +   E  +      +         +PL   EI+V  + +D  ++N      
Sbjct: 61  LGINLGGISLSNPEGFTPKSMLDVNKAVAEVALIPLFRKEIQVAQLSLDGANINLVTRKN 120

Query: 120 GVSNWFQRKSTMDM---------------IHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
           G S+      T                  + +V +  + +   +I +ID+   +    + 
Sbjct: 121 GSSSLDGLTGTDPSVKSSSTAAPASSPTQLASVEVGGVSITNTQINMIDETKGETQTFTL 180

Query: 165 LNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            +L +    L+  +P++ +         + ++G G     R   ++       +  +   
Sbjct: 181 DSLTLGTFSLDKFAPIAYEFTATLSDMKITSKGEGELKLSRDFNQLVIEKLKIDTVVEGN 240

Query: 221 -IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
            I    L   + ++    L   +     + + +   + S  L +    K  ++  +F++ 
Sbjct: 241 SIPNQKLTTALSVNTEIALDKKQLLADITQLNAADINASGKLTVNYGTKVPQIKADFQVG 300

Query: 280 DGNVR--ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA 322
           D +V   + + +  +     S   +  T+        L+ S   A
Sbjct: 301 DIDVDSLLPKSEATANGAPVSAGAEQATEPDLSALKSLDLSVKLA 345


>gi|163744052|ref|ZP_02151419.1| AsmA family protein [Phaeobacter gallaeciensis 2.10]
 gi|161382668|gb|EDQ07070.1| AsmA family protein [Phaeobacter gallaeciensis 2.10]
          Length = 650

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 84/312 (26%), Gaps = 24/312 (7%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIEGLS 87
               +    Q     G+ +   G +   + P   V    + +              E L+
Sbjct: 28  EKLAQLAAAQIEKQTGRTVTFGGRVGYTLWPTLGVKADRVALSNAPWAGPEPMLTAERLT 87

Query: 88  MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMD------------MIH 135
           +      L+ G++RV ++    P LN    + G  NW    ++                 
Sbjct: 88  IGVAAADLIGGKVRVTELSAVLPQLNLSTRADGTGNWVLDPASDSETKAVPATPGSMDSL 147

Query: 136 NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195
            V +E +++ G  ++      +    +  ++L +            I         +   
Sbjct: 148 PVSIEALNLTGATLRYA-PHGETPIEMKQIDLALQWPDPTGTVVADITLRPAGDPVQIEA 206

Query: 196 NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255
                   F+        +   ++      L +    +  G               S+A 
Sbjct: 207 EIG----TFEAFLAGQVSSVGATVTAADTFLRFDGRANTAGAATGRMTGKSTDLARSLAV 262

Query: 256 DFSKLLNLELSAKKSRLSGNFKI-SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314
             +       + K   L  +    +DG + +    L++     +        V+  +   
Sbjct: 263 LGAAQGIEVPAVKTWLLGSDLTYTTDGRLALRDLTLEA----DANKLRGAADVTLGDVPK 318

Query: 315 LNFSENGAESMH 326
           +    +G +   
Sbjct: 319 VTARLSGDQLDL 330


>gi|146292873|ref|YP_001183297.1| AsmA family protein [Shewanella putrefaciens CN-32]
 gi|145564563|gb|ABP75498.1| AsmA family protein [Shewanella putrefaciens CN-32]
          Length = 608

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/345 (13%), Positives = 117/345 (33%), Gaps = 24/345 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +   L  L ++ L+    + +F D  DF+ +         G+++ +   +     P 
Sbjct: 1   MKLIKWFLAILVTLALLVTLYLTVFFDPNDFKPEIVNAVKKQTGRELVIADDLSWTFFPA 60

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    I +   E  +      +         +PL   EI+V  + +D  ++N      
Sbjct: 61  LGINLGGISLSNPEGFTPKSMLDVNKAVAEVALIPLFRKEIQVAQLSLDGANINLVTRKN 120

Query: 120 GVSNWFQRKSTMDM---------------IHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
           G S+      T                  + +V +  + +   +I +ID+   +    + 
Sbjct: 121 GSSSLDGLTGTDPSVKSSSTAAPASSPAQLASVEVGGVSITNTQINMIDETKGETQTFTL 180

Query: 165 LNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            +L +    L+  +P++ +         + ++G G     R   ++       +  +   
Sbjct: 181 DSLTLGTFSLDKFAPIAYEFTATLSDMKITSQGEGELKLSRDFNQLVIEKLKIDTVVEGN 240

Query: 221 -IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
            I    L   + ++    L   +     + + +   + S  L +    K  ++  +F++ 
Sbjct: 241 SIPNQKLTTALSVNTEIALDKKQLLADITQLNAADINASGKLTVNYGTKVPQIKADFQVG 300

Query: 280 DGNVR--ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA 322
           D +V   + + +  +     S   +  T+        L+ S   A
Sbjct: 301 DIDVDSLLPKSEATANGAPVSAGAEQATEPDLSALKSLDLSVKLA 345


>gi|313677214|ref|YP_004055210.1| asma family protein [Marivirga tractuosa DSM 4126]
 gi|312943912|gb|ADR23102.1| AsmA family protein [Marivirga tractuosa DSM 4126]
          Length = 880

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 57/388 (14%), Positives = 124/388 (31%), Gaps = 31/388 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK-GGIKIHI-- 58
           ++++LI LG + ++ ++    VP+           + +    +  K+  +   I I +  
Sbjct: 1   MKKLLIVLGSIIALFVLTIILVPVLF-KDRIVSTVQTEIDKSINAKVNFEPAKISISLLS 59

Query: 59  -LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIR-VFDMYIDQPHLNF 114
             P  ++  +D  I  KE   G      +  S+  + + +L GE   +  + +D+P +N 
Sbjct: 60  NFPNLTLGVRDFSITGKETFEGDTLFAAKDFSVEMDIVAILKGEPLNIKGIMLDEPLINI 119

Query: 115 YLSSKGVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
            +   G +N+              ++ +      ++   +K GRI   DQ  D    L  
Sbjct: 120 LVLKDGSANYDITYPSDEQEPVEDTSSEDEFKFGIDHWEIKNGRINYYDQMYDMAISLLG 179

Query: 165 LNLQISARFLNIISPLSIDSIKGSVIA--EGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
           ++   +  F   +  +   +         +G     +K     +       N   + K  
Sbjct: 180 VDHTGNGDFTLSVFDMQTKTTAEDFSFAYDGDVYVAHKTLKADLFLGMDMDNMKFTFK-D 238

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG------DFSKLLNLELSAKKSRLSGNF 276
                    ++  G              F+                          SG F
Sbjct: 239 AKATLNDFHLNFDGYFAMPTDDYDMDINFATTDTEFKNVLSLVPGMYADGFDDLETSGEF 298

Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEE 336
             S     I      + +P  + D   +    +  +  L   + G E MH  +E+   ++
Sbjct: 299 DFSG---YIKGIYSDTKMPGFAVDLVVRDGFVKAPDVPLPIEKIGLE-MHAKSESGDLKD 354

Query: 337 EEKKNKNDDLKKDDIQYSVNKKEEKDNS 364
              + KN  L  D  +++        +S
Sbjct: 355 GLLELKNFGLTIDQDRFTAQAVVNNFDS 382


>gi|91793379|ref|YP_563030.1| AsmA [Shewanella denitrificans OS217]
 gi|91715381|gb|ABE55307.1| AsmA [Shewanella denitrificans OS217]
          Length = 614

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 32/308 (10%), Positives = 93/308 (30%), Gaps = 26/308 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +   L    ++ +     + L  D   F+ +         G+++ +K  +     P 
Sbjct: 1   MKLIKWLLAIALTLCVSLVLYITLLFDVNAFKPELIELVKKQTGRELQIKQDLSWSFFPK 60

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    I +   +        K++G+       PL S ++++  + +D   +N   +  
Sbjct: 61  LGIDLGGIILSNPQGFKTDEMIKVKGVVASVALKPLFSNKVQIEQLLLDGVEINLVTTQD 120

Query: 120 GVSNWF-------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           G S+                      + S    +  + +  + V   ++ II+   D + 
Sbjct: 121 GRSSLDGLVAENAPNRAPEVTQESLSKGSGQFTMDELSIGGVRVTNAKVNIINLAQDSLT 180

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            L+     +    L   S L  +  + +     +       +     +        I   
Sbjct: 181 TLNLKEFTLGKFSLGQASQLQYEF-EMAANINVSSQGKGLLTVSSDLSKLSIDGLDIKTT 239

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF----SKLLNLELSAKKSRLSGNF 276
           +    L   I   + G L  +  +                 S  + +  +    +++ + 
Sbjct: 240 MSGDALPETINTAMIGALSLDINRQALQLTLDKLSAQDFSGSADIGVNYANPIPKINLSL 299

Query: 277 KISDGNVR 284
            + + ++ 
Sbjct: 300 VLDEMDLD 307


>gi|85859654|ref|YP_461856.1| ATPase involved in pili bigenesis [Syntrophus aciditrophicus SB]
 gi|85722745|gb|ABC77688.1| ATPase involved in pili bigenesis [Syntrophus aciditrophicus SB]
          Length = 1185

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 99/307 (32%), Gaps = 32/307 (10%)

Query: 2   LRRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +R+    L   F +  L+  F  P        +       +  +G+K++V     +H+ P
Sbjct: 21  IRKAAYSLIGFFVLFSLILFFAGPPL-----LKSYLTDSLSRTLGRKVSVG---AVHVNP 72

Query: 61  -FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
              S+   D  + +++  +     +   M A+   +L     + ++ + QP++N   ++ 
Sbjct: 73  LKLSMAVDDFSLAERDGKTPFISFKQAYMNAQLASILFAGPVLSEIRLTQPYVNLVRTAN 132

Query: 120 GVSNWFQ-----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
              N+              +          L  I +  GRI+  D+   + + + DL+L 
Sbjct: 133 NTYNFQDIVDRLSTPPTESQQKPSKPMRFSLNNIRITQGRIEFDDRPKYRRHEIHDLSLA 192

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
           I               +   +  E +   +         +     ++  SL ++L  L  
Sbjct: 193 IP------FLSNLFYRVDKYIEPEFSAVVNGAPFHLTGKSKPFDADREASLNLKLNRLGL 246

Query: 229 PIII-----DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
              +      L  +L            F    D +  L L  +A  + L          V
Sbjct: 247 SEYLTYVPKKLHFSLPGGTLDADIKVAFVQPEDKAPSLQLSGAASLNNLKLEEAKDTPTV 306

Query: 284 RISRYKL 290
           R+    +
Sbjct: 307 RLKSLNV 313


>gi|120599056|ref|YP_963630.1| AsmA family protein [Shewanella sp. W3-18-1]
 gi|120559149|gb|ABM25076.1| AsmA family protein [Shewanella sp. W3-18-1]
          Length = 608

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/345 (12%), Positives = 116/345 (33%), Gaps = 24/345 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +   L  L ++ L+    + +F D  DF+ +         G+++ +   +     P 
Sbjct: 1   MKLIKWFLAILVTLALLVTLYLTVFFDPNDFKPEIVNAVKKQTGRELVIADDLSWTFFPA 60

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    I +   E  +      +         +PL   EI+V  + +D  ++N      
Sbjct: 61  LGINLGGISLSNPEGFTPKSMLDVNKAVAEVALIPLFRKEIQVAQLSLDGANINLVTRKN 120

Query: 120 GVSNWFQRKSTMDM---------------IHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
           G S+      T                  + +V +  + +   +I +ID+   +    + 
Sbjct: 121 GSSSLDGLTGTDPSVKSSSTAAPASSPAQLASVEVGGVSITNTQINMIDETKGETQTFTL 180

Query: 165 LNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            +  +    L+  +P++ +         + ++G G     R   ++       +  +   
Sbjct: 181 DSFTLGTFSLDKFAPIAYEFTATLSDMKITSKGEGELKLSRDFNQLVIEKLKIDTVVEGN 240

Query: 221 -IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
            I    L   + ++    L   +     + + +   + S  L +    K  ++  +F++ 
Sbjct: 241 SIPNQKLTTALSVNTEIALDKKQLLADITQLNAADINASGKLTVNYGTKVPQIKADFQVG 300

Query: 280 DGNVR--ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA 322
           D +V   + + +  +     S   +  T+        L+ S   A
Sbjct: 301 DIDVDSLLPKSEATANGAPVSAGAEQATEPDLSALKSLDLSVKLA 345


>gi|237747637|ref|ZP_04578117.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
 gi|229378999|gb|EEO29090.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
          Length = 1093

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 42/367 (11%), Positives = 99/367 (26%), Gaps = 39/367 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-P 62
           R       +F V+LV       FI      +  +        +K++     K+   PF  
Sbjct: 15  RFAKWFQIIFIVLLVAYGLTGFFIVPDLINKKAQEFVAEKFQRKLSFT---KVSFNPFTL 71

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +  F+ +++ +    +  +  + L +             V  + +  P +          
Sbjct: 72  TADFEGMQLSEHGSENGFASFDHLLVDFSAESYFRLAPVVEKLTLTNPKIRLERQEDNRY 131

Query: 123 N------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
           N      +       D      +  I +K G ++  D+  ++ +F+ +LNL I       
Sbjct: 132 NIDDFVAFAMEPKEDDSSAKFAVNNIQIKNGLVEFDDKPKNKRHFVDELNLTIP------ 185

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
                   +   V    +   +N++           + +  ++ ++L  +     I    
Sbjct: 186 FISSLPSQVNIFVDLALSAKVNNEKIEISGKTRPFFRERDGTVNLKLDSIDLVSYIS--- 242

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR---------ISR 287
            L +     +  G  S        +  E       + G   +    +          I  
Sbjct: 243 YLPFKPGFKLKDGKLSTD-LEIGFVKPEEGKMGLFVEGRIDLDAFQLADLNGADLLKIPE 301

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347
             ++    +          V+                  D N    +  E      +   
Sbjct: 302 LDVKIDKSD---VLSGNLAVNL-------VELKYPVVSLDRNRKGQWNFERMFATVNGKS 351

Query: 348 KDDIQYS 354
           K   + S
Sbjct: 352 KPQKETS 358


>gi|161519850|ref|YP_001583277.1| hypothetical protein Bmul_3301 [Burkholderia multivorans ATCC
           17616]
 gi|189353971|ref|YP_001949598.1| membrane protein [Burkholderia multivorans ATCC 17616]
 gi|160343900|gb|ABX16985.1| protein of unknown function DUF748 [Burkholderia multivorans ATCC
           17616]
 gi|189337993|dbj|BAG47062.1| membrane protein [Burkholderia multivorans ATCC 17616]
          Length = 1264

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 50/334 (14%), Positives = 100/334 (29%), Gaps = 42/334 (12%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65
           IGLG L  +VL G      F      R   E+Q +  +G+   ++   +I + P+  ++ 
Sbjct: 28  IGLGILIFLVLFGLLG--FFAAPPLIRHVAEQQLSEQLGRPATIR---RIALNPYTLNLE 82

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
             DI + ++        I  L +R  +  L  G   V ++ +D P            N+ 
Sbjct: 83  ADDIHVGERGGQGDFVDIGKLVVRPSWSSLFRGAPIVNEVRLDSPRFRIVRYDAQRFNFT 142

Query: 126 Q-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                               +  I V  GRI   D+  ++ + + +  L +         
Sbjct: 143 DLIEKFSTPPKPDSKPTLFSVSNIQVNNGRIDFDDRLLNEKHVVDEWTLGVP------YI 196

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID----- 233
                     V  +    FD    A        A+++   + ++   L  P +I      
Sbjct: 197 ATLPSKTDIFVEPKLRMRFDGSPIAIDGKTKPFAQSRESEIALKFDKLDVPKLISYVPAK 256

Query: 234 LFGNLFWNEKQPIYSGVFSVAG----------DFSKLLNLELSAKKSRLSGN-------- 275
           L   +         S  F ++G                 +   A +   +          
Sbjct: 257 LPVAVTSGLLSSDLSVNFVMSGDTPALRVSGTVDLADAKVTGPASEPLFAARGVHVAAAG 316

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
            +     +     +L   + + S D+     V +
Sbjct: 317 LEPLRNAMHFDEIRLDRPVIDLSRDKQGVLNVEK 350



 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/356 (12%), Positives = 99/356 (27%), Gaps = 59/356 (16%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +V   D ++             G+ + A  L  L   +   ++ +D+P ++     +GV 
Sbjct: 288 TVDLADAKVTGPA-SEPLFAARGVHVAAAGLEPLRNAMHFDEIRLDRPVIDLSRDKQGVL 346

Query: 123 NWF------------------------------------QRKSTMDMIHNVILEKIHVKG 146
           N                                      Q   T     ++ +  + + G
Sbjct: 347 NVEKLAGSPAAAPKPASAAGNGASRAAVAAASAPAASGAQAADTKTPPLDLTIRHVAIDG 406

Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA-FK 205
           G + + D+       LS            + + L   +++    A+ T +    R    K
Sbjct: 407 GTVNLDDRVPATPTALS---------LTKLAATLDGFALQRKTPAKYTLSTSLSRGGDLK 457

Query: 206 ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA-GDFSKLLNLE 264
                    K +  K+ +  LA    + L   L    +  +  G         +      
Sbjct: 458 AEGAVDVAAKQVDTKLVVDALAL---VPLQPYLGEATRARVLDGALGATINAKADWGKTP 514

Query: 265 LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
           L A+ +       +    +     K  +I+   +  +  K  V+     + +   +G   
Sbjct: 515 LDAQVA--DSELSLKSLKLATPDAKSPAIVLPDARAKIAKVDVAARTAEIASVDAHGLAL 572

Query: 325 MHD------LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374
                    ++   F    +       + +     + +     D  + KE   NF+
Sbjct: 573 DVKRLKNGNIDLAAFASPAQPAVPQRTVARKAQAAAPSWHYRIDALNVKEASANFT 628


>gi|149915898|ref|ZP_01904422.1| AsmA family protein [Roseobacter sp. AzwK-3b]
 gi|149810221|gb|EDM70067.1| AsmA family protein [Roseobacter sp. AzwK-3b]
          Length = 660

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 36/322 (11%), Positives = 81/322 (25%), Gaps = 29/322 (9%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESK 82
           L +      +    Q +   G+ +   G   I   P   V   ++ +            +
Sbjct: 23  LLLPGDRIAKIAAEQISTATGRDVIFSGRTTISFYPVLGVSTGEVLVANAGWSDAGPMLE 82

Query: 83  IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW--------------FQRK 128
            + L +  E + L  GEIR+  +    P +    ++ G  NW                + 
Sbjct: 83  ADSLKIGVEPVALFGGEIRITGLEAVNPRVLLERAADGRVNWEIGVEGVAPSGQSSPGQP 142

Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188
           +       + L++  +   ++   D  + +   L ++NL +     +  +     +    
Sbjct: 143 AARSERLALTLDRALITDAQVTYSDHGTGETLTLQNINLDLRWPDYDGAATFEASARPAG 202

Query: 189 VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248
            +   +G  D                    L   +      +  D    +   +     S
Sbjct: 203 SVVTISGELDQ--------VGTFIAGGVTDLLATISTSGGTVDFDGRAGV-LPQLGGRLS 253

Query: 249 GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL---QSILPNSSTDEDNKT 305
              S    F     +        +     ++         +L    S L           
Sbjct: 254 AELSDTAAFLAAFGVSGVDIPQGMGRAISVATDMTLSENMRLSLRDSALALDDNRLTGAA 313

Query: 306 KVSQDEE-NLLNFSENGAESMH 326
            +    E   LN          
Sbjct: 314 DIFLGGERPRLNAQLTARSLDF 335


>gi|260463550|ref|ZP_05811749.1| AsmA family protein [Mesorhizobium opportunistum WSM2075]
 gi|259030641|gb|EEW31918.1| AsmA family protein [Mesorhizobium opportunistum WSM2075]
          Length = 617

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 40/339 (11%), Positives = 102/339 (30%), Gaps = 35/339 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR +  +G    V+ +    +PL       R+    + +   G ++A+ G  +I + P 
Sbjct: 6   IRRGVWAIGAAVIVIALVVAALPLIASTRIVRDRIAWEMSAWSGFRVAIDGSPRIEVWPN 65

Query: 62  PSVFFKDIRID--QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                 D+ +      D     + E + +    +  L G++      + +P +    S+ 
Sbjct: 66  FRAILTDVTLSKWTDTDAPPVVEAERVEVDLSAMAALRGDVEFSTARLVRPTIRVQRSAD 125

Query: 120 GVSNWFQRKST-------------MDMIHNVILEKI-HVKGGRIKIIDQESDQVYFLSDL 165
           G+                              L+K+     G ++  D        ++ +
Sbjct: 126 GLFLPTAPTGGRIARSIDAARGVVSANPAKPDLDKLPTDTFGTVEFRDGR-----MVASV 180

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL-KIQLF 224
           N +      ++    +  ++  +     TG +  +       +  P    A  +  + L 
Sbjct: 181 NGKDVEILSSLSGQATWAAMNSNATLSATGIWRGESVTVDAASAKPLVLFAGGMAPLALS 240

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK--------LLNLELSAKKSRLSGNF 276
             A P      G    +E    + G    A    +         +    +     +S   
Sbjct: 241 LKAAPATFSFDGTASMSE-NAYFDGQVKFAAPSLRRVLEWTQAGIAPSAAIGSVSISSKV 299

Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315
             S G ++       ++  +++        +S  +   +
Sbjct: 300 TASAGRIKFEN---TALALDNNPGM-GALDLSLGDAQPV 334


>gi|261378884|ref|ZP_05983457.1| AsmA family protein [Neisseria cinerea ATCC 14685]
 gi|269144700|gb|EEZ71118.1| AsmA family protein [Neisseria cinerea ATCC 14685]
          Length = 706

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 48/380 (12%), Positives = 116/380 (30%), Gaps = 26/380 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFT---VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           R+   +  L  ++L        V       + R   ++       +KI+    I+  +LP
Sbjct: 11  RLKYAVAVLTILLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLP 69

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            P+V  K++ I +         I+   +   +  L S +I+V    +    L      KG
Sbjct: 70  RPTVILKNLTITEPGGDRTAVSIKETKIGLSWKNLWSDQIQVEKWVVSGAELALTRDGKG 129

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
           V N               + +I ++   +++      + + L ++ L + +   +     
Sbjct: 130 VWNIQDLIDNPKRKA--SVNRIIIENSTVRLD--FLQERFTLKEVRLNLQSPVSSGQQFE 185

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
           S  ++ G      + ++ +K        N P  +     + +     + I +   GN   
Sbjct: 186 SSGTLTGE---NLSASWKSKGLFISDGINPPEIS-PFHFEAETALNGHGITVSTTGNPTI 241

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300
                            +   NL L+A+   L+   + ++  +        +   + ++ 
Sbjct: 242 RFNASGPDATNLSLRADTAFHNLHLTAQIPTLA--LRNNNIKIETVNGTFTATANDGNSQ 299

Query: 301 EDNKTKVS-------QDEENLLNFSENGA----ESMHDLNETDFFEEEEKKNKNDDLKKD 349
                K+                 S N      ++   L     +       +   L   
Sbjct: 300 WGGSFKLDKAKLHPGIGNIGNAEISGNVKTPRLQTNFSLGSPLVWSRNNG-LEAPRLHVS 358

Query: 350 DIQYSVNKKEEKDNSHDKEN 369
            +Q +VN+  +       + 
Sbjct: 359 TLQDTVNRLPQPRFISQLDG 378


>gi|170076676|ref|YP_001733314.1| hypothetical protein SYNPCC7002_A0041 [Synechococcus sp. PCC 7002]
 gi|169884345|gb|ACA98058.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
          Length = 1931

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 45/389 (11%), Positives = 113/389 (29%), Gaps = 18/389 (4%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           +R++ G      + +        +  +       E+Q    + + I +       +    
Sbjct: 22  QRLITGAAVGLVLAVGAGLGYGRYYIYQRLSPQIEQQLNKQIDRPINLGSVQGFSLG--- 78

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            + F    +    D + +  +E +++      LL+      ++ +  P +    +     
Sbjct: 79  GLRFGPSELPPTADSNDQLLVEAIAVDFNLWTLLTQRRLDLNLTLINPQVTVEQNQARRW 138

Query: 123 --NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                           V +  I ++ G++ +I ++         + L I++    + +  
Sbjct: 139 LDLNIAPDDPDTEGLEVNINNIRLRRGQLTLIARQRSGTLS-PPVQLAIASGKGRLTNQN 197

Query: 181 SI--------DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
            +         +  G +  EG  +F+ + S  +I A         +L +     +  ++ 
Sbjct: 198 KVINFDVQGKLASGGDLNIEGILDFEQETSNLRIRAQKLDPVAISNLVVPPVTFSGGVVD 257

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                         ++G     G    +  L    +    SG     +  ++  +   + 
Sbjct: 258 GAIELFLEEGDLSDWNGELMAEGSTLIVPALTKPVE--DFSGKIGFQNQELQFQQTTGRL 315

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD--D 350
                S D +   +     +     +E          E+  F  E +             
Sbjct: 316 GTLPFSGDLNINFETGFTGQIETAPAEIAQILDTFELESPAFPVEGQLATTVTFGGPLEQ 375

Query: 351 IQYSVNKKEEKDNSHDKENQENFSGDKMI 379
           IQ +V          D+   E F GD  I
Sbjct: 376 IQLAVAATNASQLKVDRLTLERFQGDLTI 404


>gi|319795405|ref|YP_004157045.1| asma family protein [Variovorax paradoxus EPS]
 gi|315597868|gb|ADU38934.1| AsmA family protein [Variovorax paradoxus EPS]
          Length = 670

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 42/367 (11%), Positives = 84/367 (22%), Gaps = 36/367 (9%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSF--ESKIE 84
            W   RE   R  +   G+K  +   + + +     +V F  I              K +
Sbjct: 34  PWDVLREPVNRYVSEKTGRKFEITRRLDVDLGWRAATVKFDGIEFANPSWARDPYLVKAD 93

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV 144
                    PL++ +I +  + +  P L   +   G   W   K T D      +  + +
Sbjct: 94  RAEFDIRIWPLVTSKIVIPRLALFSPTLGLQMEQDGRRTWAFGKDTSDGGTVPSIGLMQI 153

Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204
             G I  + +                                  +     G +  +    
Sbjct: 154 DSGAIDFLAKHLGVDLHAD--------------VKYDTSLGAMPLSYRIKGRYKGQPLTA 199

Query: 205 KITANFPA---KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261
                         A    +++   A    +   G +            F + G     L
Sbjct: 200 DGRTGNVLQINAAGAPPFPLEINAAAGQTKLKASGTVAELASLDGVDAKFQLKGQTLGAL 259

Query: 262 NLELSAKKSR-----LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD-EENLL 315
              L     +     LSG+        +++  K +  L +         +  Q  +   L
Sbjct: 260 FPLLGIALPQTSPYALSGDLSKRGTLWQVAGLKGKLGLSD----IAGDMRFDQATQVPYL 315

Query: 316 NFSENGAESMHDL------NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369
                      D                  +          ++     K       D E 
Sbjct: 316 AGDLRSKVMDMDDLGPLIGLPPTARSAGAVEGVAPPPSITQVRRPAGAKVLPTAPLDFER 375

Query: 370 QENFSGD 376
               + D
Sbjct: 376 LRAMNAD 382


>gi|226940160|ref|YP_002795233.1| hypothetical protein LHK_01233 [Laribacter hongkongensis HLHK9]
 gi|226715086|gb|ACO74224.1| Putative exported protein [Laribacter hongkongensis HLHK9]
          Length = 719

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 87/304 (28%), Gaps = 11/304 (3%)

Query: 6   LIGLGFLFSVVLVGAFT--VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
               G     V + AF   +    D    R+  E   +   G+ + V GGI     P P 
Sbjct: 12  FAVFGMASVAVFIAAFLSLLYWQFDSHSARQKLEAAFSAH-GRILHVNGGISPVFWPKPG 70

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
           +   D+ + + +  S  +++  + +R  + PLL     +  + +            G  N
Sbjct: 71  IAANDVTLTEADGSSPFARMRRIELRFAWFPLLQKHYTIERLRLTGLDATITRQVDGSLN 130

Query: 124 WFQ-RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                +   D   +V L+++ +  G + + D        LS L +  +    +     S 
Sbjct: 131 IADLLQPQPDQEVDVRLDRLELYDGTLALRDIAQQARIGLSALRIDATDLQSDGDIEFSA 190

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242
            +  G       G    + +  +I            L     P        L  N   N 
Sbjct: 191 TTEWGKYRFPVEGETPIRIADDQIELAGLRLQTTGKL-----PPVQSFQAQLTANTRINL 245

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
            + + +      G   K  + E     +  S         +   +Y    I         
Sbjct: 246 AKSLIAA--DKVGFTLKTSSPEAGLTLNAPSLEISQDGLRIPSLQYAGNLIGSEGKHSLH 303

Query: 303 NKTK 306
               
Sbjct: 304 GTAS 307


>gi|190890426|ref|YP_001976968.1| hypothetical protein [Rhizobium etli CIAT 652]
 gi|190695705|gb|ACE89790.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652]
          Length = 629

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 44/348 (12%), Positives = 93/348 (26%), Gaps = 38/348 (10%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66
           + L     + +      P  I     R   E   +   G +  +KG   +   P P +  
Sbjct: 29  VLLLIALGLFVALRVAAPYLITTGFVRSGIEDALSKWTGYQAEIKGDPVLEFWPTPRITL 88

Query: 67  KDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124
            ++ I Q          +IE LS     +  L G     + ++ +P+L      KG+ +W
Sbjct: 89  NEVTIRQPRESGDKLLGRIESLSADFSLIDALRGRTSFHEFHLLRPNLALTRDEKGLIDW 148

Query: 125 F---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
                                +D   +  +  + V+ G   + D  S + Y    +   I
Sbjct: 149 SYAGLLARAISGVRYENGAEVLDPALDAEIGAVTVEDGTFAVTDIASAKTYHFDSVTADI 208

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
           +   L+      + +       +          AF   +     +   +L          
Sbjct: 209 AWPRLSGAISAVVIARNNGEDLKVDFASRQPLLAFAGKSAETRTSLTSNL---------- 258

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDG 281
           + +   G           SG  +V+      L                  L  +   S  
Sbjct: 259 LTVRFQGIASIASLSA-LSGNIAVSIADVPALLTWSGRSIPGIGTLKSASLESDIMSSGN 317

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
            +R +   L     +++   D        +   +  +    +      
Sbjct: 318 GLRFNDLSLSLNEASATGVMD--LSTEPGKRPKIGGTLAFDQMNLKPF 363


>gi|149912137|ref|ZP_01900723.1| AsmA protein [Moritella sp. PE36]
 gi|149804785|gb|EDM64827.1| AsmA protein [Moritella sp. PE36]
          Length = 642

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 115/335 (34%), Gaps = 31/335 (9%)

Query: 2   LRRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +++VL+G+G L +++ +VG   +   ++    +++   QA  +  + + ++G + +   P
Sbjct: 1   MKKVLLGIGGLIAIIFIVGVIAMKFLVNEELIKDNLIEQAKQLTKQDVTIEGDLHLTFYP 60

Query: 61  FPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
                   + +  K     S + +++ +    E + LL+  I V ++ +D   +N    S
Sbjct: 61  QIGFELGKLTLFNKHEYSDSTQIEVKSVHAAVELMSLLTKTIVVTNVKVDGLTVNVETLS 120

Query: 119 KGVSNWFQRKSTMDMIH------------------------NVILEKIHVKGGRIKIIDQ 154
            G +N  +  + +                              ++E +++   ++ + ++
Sbjct: 121 DGRNNMDELLARLAPPEKPLSNEDIQAIKVTSEGEIAKSEYQFVVEGVNITNAQLSLNNR 180

Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214
           +    + LSD +L I          +++ +   +       N     +  +         
Sbjct: 181 QDGTYHKLSDSSLNIGEFAFGKPVAITLAANYRTNELTAKLNTSMVLTVDEQFNEIKLAQ 240

Query: 215 KAISLKIQLFPLAYP-IIIDLFGNLFWNEKQPIYS---GVFSVAGDFSKLLNLELSAKKS 270
               L +    L  P + I L G+L ++             +V               K 
Sbjct: 241 LDNKLALTGKLLPRPEMNISLQGDLTYDNAYKTVKFVGLKLAVDELTVTGDLSVDVFSKP 300

Query: 271 RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
            +  N  ++   V     K++    N+ +      
Sbjct: 301 SIEYNLAMNTLVVDDWLPKVKPASTNNESAAKGAA 335


>gi|212635546|ref|YP_002312071.1| AsmA protein [Shewanella piezotolerans WP3]
 gi|212557030|gb|ACJ29484.1| AsmA [Shewanella piezotolerans WP3]
          Length = 605

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 48/349 (13%), Positives = 107/349 (30%), Gaps = 30/349 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +      L  +V      + L  D  DF+           G+ +A+   +     P 
Sbjct: 1   MKLLKWFFVALLGLVAALVLYITLIFDPNDFKPQIVEVVKEKTGRDLAINSDLSWTFFPS 60

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    I +   +         +  +      +PLL+ E+ +  + +D   L+      
Sbjct: 61  LGIKLGGITLSNPDGFENAAMVSVNEVVAEVALMPLLTKEVEISQLNLDGLTLSLETQKD 120

Query: 120 GVSNW---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
           G S++                  +++   +  + +  I +   +I  +D++S+    LS 
Sbjct: 121 GRSSFDGLTGGGNSSEASKRPANEASSVSLSKLDIGGISITNTQISNLDRQSNTKQLLSL 180

Query: 165 LNLQISARFLNIISPLSIDSIKGSVIA----EGTGNFDNKRSAFKITANFPAKNKAISLK 220
            +L +    L+  +PL  +             G G     ++   I  N  A    +  K
Sbjct: 181 KSLTLGRFQLDQFAPLKYELSASLADLNVTSSGEGQIKVSQNLQLIVINDFAVTNQLKGK 240

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF--KI 278
                    +  DL  +L     +   S V +         + +L         N   ++
Sbjct: 241 ---GVPNGELKADLTTSLEMALDKQTMSLVLASFNAADIDASGKLDIAYGNKVPNIMAEL 297

Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
             G+V + R+  +         + +  K +   E  L           D
Sbjct: 298 EVGDVDLDRFLPKESTKTDDIKKTDTAKAA-AVEPDLTVM---KSVNLD 342


>gi|256421015|ref|YP_003121668.1| AsmA family protein [Chitinophaga pinensis DSM 2588]
 gi|256035923|gb|ACU59467.1| AsmA family protein [Chitinophaga pinensis DSM 2588]
          Length = 892

 Score =  106 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 46/350 (13%), Positives = 117/350 (33%), Gaps = 36/350 (10%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK----- 55
           ML+++L  +G    V+++ A  +P F     F+          + K++      K     
Sbjct: 1   MLKKILKIVGIFLLVLVIAAIAIPYF-----FKGKIMSIVKTELNKQLVADVDFKDVDIS 55

Query: 56  -IHILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPH 111
            I   P  +V  +D+ +  +    G     ++ + +    + ++ G+ + ++++ I  P 
Sbjct: 56  LIRHFPRLAVALEDLSVVNRAPFAGDTLFAVKKIDLALNLMSVIKGDKMDIYNVDIVAPR 115

Query: 112 LNFYLSSKGVSNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           ++  ++ +G+ NW              T      + L++  ++   I+  D++ D    +
Sbjct: 116 IHAIINKQGLVNWDITKPDTAQTTPADTATTKFALNLQQYSIEDATIRYDDEQGDMGMLI 175

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
             LN Q    F   +  L   +    V    T  +       +      A      +++ 
Sbjct: 176 EGLNHQGKGDFTQDLFTLQTTTQAEGV----TFRYGLIPYLLRTKTTMDAD-----IQVD 226

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                Y       G    N  +  + G F +  D +  ++L + A  ++      +    
Sbjct: 227 NKTSTYTFQ---KGKATLNNLELAFQGFFKLIDDSTYGMDLTMKAPSTQFKDILSLVPA- 282

Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETD 332
           + +  +        ++ D   K   S  +      +    +      +  
Sbjct: 283 IFMQDFDKIKTSGTAAFDGYVKGTYSATQMPAFGLNLAVKDGFFQYPDLP 332


>gi|167587976|ref|ZP_02380364.1| Putative transmembrane protein, AsmA-like [Burkholderia ubonensis
           Bu]
          Length = 248

 Score =  106 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 75/229 (32%), Gaps = 19/229 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLF---IDWTDFREDFERQATLIVGKKIAVKGGIKI- 56
           + R     +  L   V V    + +F    DW   R   + + +  +G++ ++ G +++ 
Sbjct: 3   IARPFGKIVAALIVTVAVVVGGLAVFVQTFDWNRARPWIDDKVSEAIGRQFSINGDLRVD 62

Query: 57  -----------HILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVF 103
                        +P+P    ++I I   +       + ++ +      LPLL   I + 
Sbjct: 63  WHRPPFEHGWRAWVPWPRFTARNIVIANPDWARAKAFATLDAIGFDVAALPLLDRRIVIP 122

Query: 104 DMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI--HNVILEKIHVKGGRIKIIDQESDQVYF 161
            + +  P ++      G  NW  +  +        + L  I    GR    D+       
Sbjct: 123 SIELVNPSVDLERLKDGRENWTFKLKSAARPRTWTLDLHDIAFMKGRAAYYDEVKHADLK 182

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF 210
            +   L     F +++      S + S    G+ +     +  +     
Sbjct: 183 AAIDTLGQPIPFGDVLRQQEKSSRQESAGVVGSTSASKLNAQVRAKTAP 231


>gi|120556085|ref|YP_960436.1| AsmA family protein [Marinobacter aquaeolei VT8]
 gi|120325934|gb|ABM20249.1| AsmA family protein [Marinobacter aquaeolei VT8]
          Length = 741

 Score =  106 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 59/390 (15%), Positives = 120/390 (30%), Gaps = 50/390 (12%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLS 87
           +  D++   E          + ++G I    +P   +   ++      DG     +E L 
Sbjct: 30  NPNDYKPQIEAAVEKQTNLDLMLEGDIGWSFIP-LGLELNEVE--ANLDGERFVALEQLI 86

Query: 88  MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------------------- 124
            + +F  L++   +V    ++    +  ++ +G  NW                       
Sbjct: 87  AQIDFWSLIAMSPQVNTFLLNGLDAHLEVNEQGEGNWTRIMREQNATAEAGTDAAEQQPA 146

Query: 125 -----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
                 + +S      N  +E + +    +   D  + Q   L D  +  S   L    P
Sbjct: 147 QETAEPEPQSASGEALNFNVENVEISNASVHYNDLSTGQSVTLEDFTVTASDITLGSEFP 206

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKIQLFPLAYPI-----IID 233
           L I     +   +   + +      +I AN      A+S L         P        +
Sbjct: 207 LDIRFRVETSQPQFAVDGN---IKARIQANQALNEFAVSGLNAVFDMSGEPFGGESVTAE 263

Query: 234 LFGNLFW---NEKQPIYSGVFSVAGDFSKL-LNLELSAKKSRLSGNFKISDGNVR--ISR 287
           L G+L     NE   +     S+A       LN++    K  L G  +IS+ +++  ++ 
Sbjct: 264 LAGSLAANLENETASLSDFSASLANLSLNTNLNVKGFGDKPALDGRIEISEFSLKELLNN 323

Query: 288 YKLQSILPNSSTDEDNKT-KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346
               +I               +   E  +  + +      D  +T F            L
Sbjct: 324 LGQPAIETTDPEVLKAIALSTNLGGEPGV-VALSDLVITLD--DTRFNGGGSYNLATGGL 380

Query: 347 KKDDIQYSVNKKEEKDNSHDKENQENFSGD 376
             D     +N       S + ++Q   +G+
Sbjct: 381 VFDLEGDKLNADRYLPPSAEGDSQGAGNGE 410


>gi|300311615|ref|YP_003775707.1| outer membrane biogenesis protein [Herbaspirillum seropedicae SmR1]
 gi|300074400|gb|ADJ63799.1| outer membrane biogenesis protein [Herbaspirillum seropedicae SmR1]
          Length = 654

 Score =  106 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 93/332 (28%), Gaps = 45/332 (13%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHIL---------------PFPSVFFKDIRID 72
           DW   +    RQ +  +G+ I V G + +                  P   +  + + I 
Sbjct: 41  DWNSAKPWLGRQLSAALGRDIRVDGNLDLSWSLAQADDEAGALARLAPQLRLRAERLFIG 100

Query: 73  QKEDG---SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKS 129
             +         +   L +R   LPLL     V D+ ++   L    +     NW     
Sbjct: 101 NPDWAHSSDHLVRAAALDVRFSPLPLLHWHWHVTDLRVEGLDLVMERADDQRKNWRFSS- 159

Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189
                 +  + +I      I+ ++          DL+L+  AR LN  +    DS    +
Sbjct: 160 QPRSRWSFDIHRIVFGHALIRYVELPL-------DLDLRFDARPLNATATNQKDSAALVL 212

Query: 190 IAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
            A  TG +       +I         N+     +Q       +   L GNL    +    
Sbjct: 213 QAAVTGRYGQAEVNGQIKGGALPDLLNEGSVFPLQAEGDIGGVQTQLSGNLINPHQLSRA 272

Query: 248 SGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDG-------NVRISRYKLQSILP 295
                +AGD    L                 G   I+         + R S +  +    
Sbjct: 273 DLRIGLAGDSLDRLYPATGVPLPATRAFHTEGALTITRLDPQTKAWDWRYSGFSGKVGES 332

Query: 296 NSSTDEDNKTKVSQD-EENLLNFSENGAESMH 326
           +         +  +   +N L           
Sbjct: 333 D----FAGDAQYVRGPPKNHLKVKAEAGLLRL 360


>gi|39995980|ref|NP_951931.1| hypothetical protein GSU0874 [Geobacter sulfurreducens PCA]
 gi|39982745|gb|AAR34204.1| hypothetical protein GSU0874 [Geobacter sulfurreducens PCA]
 gi|298504995|gb|ADI83718.1| conserved hypothetical protein [Geobacter sulfurreducens KN400]
          Length = 1080

 Score =  106 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 47/319 (14%), Positives = 111/319 (34%), Gaps = 27/319 (8%)

Query: 3   RRVLIGLGFLFSVV--LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAV-KGGIKIHIL 59
           +++L+ +    +++  LV    V    +   +++    +    + + +    G + +   
Sbjct: 7   KKILLYVAVPLALLCGLVFTVLVARLHELDTYKDQLLAEIRKELNRPVTYRTGEVSLRFG 66

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           P  +  F D++I +++  +  + +  +  R   LPLL  ++ +  + +++P +    +  
Sbjct: 67  P--AFTFTDVKILERDGSTPFATVATIRFRLAILPLLEKKVILRRVELEKPVVQLVRNKD 124

Query: 120 GVSNWFQ--RKSTMDMIHNVILEKIHVKGGRIKIIDQES---DQVYFLSDLNLQISARFL 174
           G+ N     R+        + +  + VK G +   D  +     V  L + +L I     
Sbjct: 125 GILNIDDLLRERETKSTMELRVRGVRVKQGNLIFTDHAAVGGPLVTALREADLFIGRLVR 184

Query: 175 NIISPLSIDS------IKGSVIAEGTGNFDNKRSAF-------KITANFPAKNKAISLKI 221
              SP+SI+        +  V  EG      K +         +++ +    +       
Sbjct: 185 GKESPISIEGRLVDGKNESPVAIEGKLKLPAKNAPLTTAHLDARVSLHNINASHYWPYYS 244

Query: 222 QLFPLA-YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL---ELSAKKSRLSGNFK 277
            L P        +L   +     +    G   VAG       +    L+    RL+ +  
Sbjct: 245 NLVPFQRMSGRFNLDCTVDGTPLEFTSKGSLQVAGLRFVYPEVFRQPLTPADVRLAYSLT 304

Query: 278 ISDGNVRISRYKLQSILPN 296
            +   V IS    +     
Sbjct: 305 RTPKEVNISSVDFRMDGLT 323


>gi|238027216|ref|YP_002911447.1| AsmA family protein [Burkholderia glumae BGR1]
 gi|237876410|gb|ACR28743.1| AsmA family protein [Burkholderia glumae BGR1]
          Length = 755

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 16/156 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIR 70
             +  DW   R    ++ +  +G+  A++G +K+              +P+PSV   DI 
Sbjct: 28  FIVTFDWNRARPWINQRVSTEIGRPFAIRGDLKVGWQRPRDETGWRAWVPWPSVTANDIA 87

Query: 71  IDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128
           I   +       + ++        LPLL+  + +  + I  P L+    + G +NW  + 
Sbjct: 88  IGNPDWTRSPQFATLDAARFELAVLPLLAHRVVIPSIDIVNPALDVERLADGRNNWTFQF 147

Query: 129 STMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFL 162
                     V L       G +   D  +     +
Sbjct: 148 KQSGEPSTWKVELHDFGFAKGTVTYRDAITKADLKI 183


>gi|145588896|ref|YP_001155493.1| AsmA family protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047302|gb|ABP33929.1| AsmA family protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 609

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 88/278 (31%), Gaps = 20/278 (7%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +++ +L+GL    SVV  GA+     I+     +          G+ + + G + + + P
Sbjct: 4   LVKIILLGLAIFLSVVGAGAWYASSLINPAHLSQLIISSVKDATGRNLTISGPVSLKVFP 63

Query: 61  FPSVFFKDIRIDQKEDG----SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
             +V    + +               ++ L    + LPL   ++ +  + I   +L    
Sbjct: 64  SVAVTADQVSLSNATWASNTDPNMLVVKHLEFEIKLLPLFKKQVEISTINIAGLNLYLQT 123

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
           +  G  NW     T+            +            DQ+  +   + +++ +    
Sbjct: 124 NKAGQENWDL---TLPAAPFTAAANSAINPSASSSEQSLPDQISSIHVTDARVTYKAWGA 180

Query: 177 IS------PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
            +       L  +  +G    +   ++   + A K               +       P+
Sbjct: 181 PTKSISIPKLIYEGREGKSEFDAQADYSGYQFALKGKTGNLR-------SMFNAWDDKPV 233

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268
             DL   L  N K  +  G            +++LS+K
Sbjct: 234 KADLDFTLTLNGKTMLIQGSVDKKPKALAKFDVQLSSK 271


>gi|167587092|ref|ZP_02379480.1| AsmA family protein [Burkholderia ubonensis Bu]
          Length = 754

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 61/186 (32%), Gaps = 16/186 (8%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRID 72
              DW   +     Q +  +G+  A+ G +K+              +P+PS+    I I 
Sbjct: 30  FTFDWNHVKPWVNEQVSAALGRPFAINGDLKVDWRRPDGETGWRAWVPWPSLSATRIEIG 89

Query: 73  QKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--K 128
             +         ++        LPLL+ EI +  + +  P ++    + G + W  +  +
Sbjct: 90  NPDWAKAPKFVTLDAAHFDLAILPLLAHEIVIPSIDVVNPAVDLERLADGRNTWTFQFKQ 149

Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188
           S+      V L+      G +   D        ++   L       +++      S   S
Sbjct: 150 SSQPSPWKVRLDSFGFAKGMVTYRDAIMKADLTIAIDTLGQPIPLGDVMKEQEETSRAAS 209

Query: 189 VIAEGT 194
               G 
Sbjct: 210 AQRVGK 215


>gi|221213104|ref|ZP_03586080.1| AsmA family protein [Burkholderia multivorans CGD1]
 gi|221167317|gb|EED99787.1| AsmA family protein [Burkholderia multivorans CGD1]
          Length = 787

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 62/154 (40%), Gaps = 16/154 (10%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQ 73
             DW   R   + + +  +G+   + G + +              + +P+   ++I I  
Sbjct: 39  TFDWNRARPLIDDKVSAAIGRPFTINGDLTVRWHRAAGETGWRAWVLWPTFAARNITIAN 98

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM 131
            +     + + +E +  + + LPLL+ +I +  + +  P ++    + G +NW  +  + 
Sbjct: 99  PDWAKQRYFATLEQIDFQVKMLPLLTHDIVIPIINLVGPSVDLERLADGRNNWTFKFKSS 158

Query: 132 DMI--HNVILEKIHVKGGRIKIIDQESDQVYFLS 163
                  + L  I +  G I + DQ+   V  ++
Sbjct: 159 AHPLAWKLDLHDIRLDKGNIALSDQQQGLVMQVT 192


>gi|254672273|emb|CBA05317.1| hypothetical protein NMW_0491 [Neisseria meningitidis alpha275]
          Length = 704

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/381 (12%), Positives = 118/381 (30%), Gaps = 23/381 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  +  L  L    +    +V       + R   ++       +KI+    I+  +LP 
Sbjct: 12  LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I +         ++   +   +  L S +I++    +    L       G 
Sbjct: 71  PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             W  +           + +I V+   +++      +   L ++NL + +   +      
Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S    V  + +  + ++          P  +     +       + I I   G     
Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGTPAIR 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297
                           +   NL L+A+   L+   + +   +        +       + 
Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPALA--LRNNSIKIETVNGAFTAGGEYAQWDG 300

Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
           S   D K  +     N+ N   +G+      ++   LN    + E +  +    L    +
Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358

Query: 352 QYSVNKKEEKDNSHDKENQEN 372
           Q +VN+  +       +   +
Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379


>gi|221197814|ref|ZP_03570860.1| AsmA family protein [Burkholderia multivorans CGD2M]
 gi|221204628|ref|ZP_03577645.1| AsmA family protein [Burkholderia multivorans CGD2]
 gi|221175485|gb|EEE07915.1| AsmA family protein [Burkholderia multivorans CGD2]
 gi|221181746|gb|EEE14147.1| AsmA family protein [Burkholderia multivorans CGD2M]
          Length = 784

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 62/154 (40%), Gaps = 16/154 (10%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQ 73
             DW   R   + + +  +G+   + G + +              + +P+   ++I I  
Sbjct: 39  TFDWNRARPLIDDKVSAAIGRPFTINGDLTVRWHRAAGETGWRAWVLWPTFAARNITIAN 98

Query: 74  KEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM 131
            +     + + +E +  + + LPLL+ +I +  + +  P ++    + G +NW  +  + 
Sbjct: 99  PDWAKQRYFATLEQIDFQVKMLPLLTHDIVIPIINLVGPSVDLERLADGRNNWTFKFKSS 158

Query: 132 DMI--HNVILEKIHVKGGRIKIIDQESDQVYFLS 163
                  + L  I +  G I + DQ+   V  ++
Sbjct: 159 AHPLAWKLDLHDIRLDKGNIALSDQQQGLVMQVT 192


>gi|121635333|ref|YP_975578.1| hypothetical protein NMC1610 [Neisseria meningitidis FAM18]
 gi|218768712|ref|YP_002343224.1| hypothetical protein NMA1951 [Neisseria meningitidis Z2491]
 gi|120867039|emb|CAM10802.1| hypothetical protein NMC1610 [Neisseria meningitidis FAM18]
 gi|121052720|emb|CAM09063.1| hypothetical protein NMA1951 [Neisseria meningitidis Z2491]
          Length = 740

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/382 (12%), Positives = 119/382 (31%), Gaps = 26/382 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFT---VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           R+   +  L  ++L        V       + R   ++       +KI+    I+  +LP
Sbjct: 47  RLKYAVAVLTILLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLP 105

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            P+V  K++ I +         ++   +   +  L S +I++    +    L       G
Sbjct: 106 RPTVILKNLTITEPGGDRTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DG 163

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
              W  +           + +I V+   +++      +   L ++NL + +   +     
Sbjct: 164 KGVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ--- 218

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
             +S    V  + +  + ++          P  +     +       + I I   G+   
Sbjct: 219 PFESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGSPSV 277

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPN 296
                            +   NL L+A+   L+   + +   +        +       +
Sbjct: 278 RFNAGGADAAGLGLRADTSFRNLHLTAQIPTLA--LRNNSIKIETVNGAFTAGGEYAQWD 335

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDD 350
            S   D K  +     N+ N   +G+      ++   LN    + E +  +    L    
Sbjct: 336 GSFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVST 393

Query: 351 IQYSVNKKEEKDNSHDKENQEN 372
           +Q +VN+  +       +   +
Sbjct: 394 LQDTVNRLPQPRFISRLDGSLS 415


>gi|325136658|gb|EGC59258.1| asmA family protein [Neisseria meningitidis M0579]
          Length = 704

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/382 (12%), Positives = 118/382 (30%), Gaps = 26/382 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFT---VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           R+   +  L  ++L        V       + R   ++       +KI+    I+  +LP
Sbjct: 11  RLKYAVAVLTILLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLP 69

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            P+V  K++ I +         ++   +   +  L S +I++    +    L       G
Sbjct: 70  RPTVILKNLTITEPGGDRTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DG 127

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
              W  +           + +I V+   +++      +   L ++NL + +   +     
Sbjct: 128 KGVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ--- 182

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
             +S    V  + +  + ++          P  +     +       + I I   G    
Sbjct: 183 PFESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGTPAI 241

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPN 296
                            +   NL L+A+   L+   + +   +        +       +
Sbjct: 242 RFNAGGADAAGLGLRADTSFRNLHLTAQIPALA--LRNNSIKIETVNGAFTAGGEYAQWD 299

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDD 350
            S   D K  +     N+ N   +G+      ++   LN    + E +  +    L    
Sbjct: 300 GSFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVST 357

Query: 351 IQYSVNKKEEKDNSHDKENQEN 372
           +Q +VN+  +       +   +
Sbjct: 358 LQDTVNRLPQPRFISRLDGSLS 379


>gi|311108740|ref|YP_003981593.1| AsmA family protein 2 [Achromobacter xylosoxidans A8]
 gi|310763429|gb|ADP18878.1| AsmA family protein 2 [Achromobacter xylosoxidans A8]
          Length = 839

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/326 (10%), Positives = 91/326 (27%), Gaps = 41/326 (12%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82
             L  D   ++   E        + + + G I++ + P   +  + + + +       + 
Sbjct: 26  FLLTFDPNAYKYKLEELVQQRYQRTLTIDGEIELSLFPRIGLSVQGVSLSEPNSPETFAS 85

Query: 83  IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--------------- 127
           I+   +     PLLS    V  + I           +G  N+                  
Sbjct: 86  IDSTRLAVAVWPLLSNSFVVDHVAITGFKARVMRDKQGQFNFSNLVGGTAPITAAPANPA 145

Query: 128 ------------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
                                      + +  + +K G++++ D  +     ++ +N   
Sbjct: 146 EALAGAAQSAVQAPANGNLPQPRNNMQIDIAGLDLKDGQVQLQDAITGMAVAVTKINANT 205

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-PLAY 228
                N    + + +           N   +       +      + + L++    P A 
Sbjct: 206 GRVTFNQPFDVRMTARVEGGNPRVDANLTGQALLTLDPSAKRYAAQKLDLRMDGKLPGAE 265

Query: 229 PIIIDLFGNLFWNEKQPIYSG-------VFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281
              + + GNL +N ++               V    ++  N++ S    +L+ +   S  
Sbjct: 266 AKSLAVRGNLAFNGQKSALDIAGLEVVFQGDVTDPAARATNVDASVAIPKLAIDPHKSQL 325

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKV 307
            +     + +  + +   +       
Sbjct: 326 QIEKLAIRAKGGVADGPFEFAVDAPA 351


>gi|148261665|ref|YP_001235792.1| AsmA family protein [Acidiphilium cryptum JF-5]
 gi|146403346|gb|ABQ31873.1| AsmA family protein [Acidiphilium cryptum JF-5]
          Length = 895

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/269 (10%), Positives = 74/269 (27%), Gaps = 25/269 (9%)

Query: 12  LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71
           L  + ++G F      D   ++      A   + + +++ G +++ +   P++    I I
Sbjct: 20  LAPLAVIGLFLAS--FDPNSYKPQVIAAAERALHRPVSIDGRLRMSLSLVPTISATGITI 77

Query: 72  DQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKS 129
                      + +  +  +   LPLL  ++ + D+ +  P +N      G  +W   + 
Sbjct: 78  ANPPGYQNTNLATLRRIEAKVALLPLLRHQLNILDLVLVDPVINLEYGPTGTPDWLIGQG 137

Query: 130 TMD-------------MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR---F 173
                               V L+ + ++ G I      +             + +    
Sbjct: 138 APAPAGTGSGTGSASGPAAGVALQSVSIENGTITYHPPMALVPLNAGQPAALATPQPTVL 197

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-----NKAISLKIQLFPLAY 228
                     S+   +       ++        T    ++            + L     
Sbjct: 198 HIARFTGRAASLDAPLQLAIDAQYNGTPFTVAGTTGPVSRLTGSVAGGAPWPVDLTVSGQ 257

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257
              + + G +    +   Y+         
Sbjct: 258 GANLRVTGQIAHPREASGYALHLHATAPD 286


>gi|257483730|ref|ZP_05637771.1| AsmA [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 253

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 68/212 (32%), Gaps = 29/212 (13%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++         +  L  +++   F +    D  D++++  + A      ++ + G I   
Sbjct: 1   MKAFGKILGLFILGLLLIIVALGFALTHLFDPNDYKDEIRQLARDKANVELTLNGDIGWS 60

Query: 58  ILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           + P+  +   D  +          + ++ L +    LPLL  ++++ D+ ++  +L  + 
Sbjct: 61  LFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLNLTLHR 120

Query: 117 SSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGGRIKII 152
              G  NW                          +         + ++ + V   R+   
Sbjct: 121 DENGHGNWEDIGKPAVASTETSGETTPAPAPDAPKADRPSQPIRLDIDSLTVNNARVDYS 180

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
           D    + +    + L           P+ + +
Sbjct: 181 DARKGRTFMAESIQLSTGPIREASDIPIKLTA 212


>gi|326405157|ref|YP_004285239.1| AsmA family protein [Acidiphilium multivorum AIU301]
 gi|325052019|dbj|BAJ82357.1| AsmA family protein [Acidiphilium multivorum AIU301]
          Length = 895

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/269 (10%), Positives = 74/269 (27%), Gaps = 25/269 (9%)

Query: 12  LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71
           L  + ++G F      D   ++      A   + + +++ G +++ +   P++    I I
Sbjct: 20  LAPLAVIGLFLAS--FDPNSYKPQVIAAAERALHRPVSIDGRLRMSLSLVPTISATGITI 77

Query: 72  DQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKS 129
                      + +  +  +   LPLL  ++ + D+ +  P +N      G  +W   + 
Sbjct: 78  ANPPGYQNTNLATLRRIEAKVALLPLLRHQLNILDLVLVDPVINLEYGPTGTPDWLIGQG 137

Query: 130 TMD-------------MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR---F 173
                               V L+ + ++ G I      +             + +    
Sbjct: 138 APAPAGTGAGTGSASGPAAGVALQSVSIENGTITYHPPMALVPLNAGQPAALATPQPTVL 197

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-----NKAISLKIQLFPLAY 228
                     S+   +       ++        T    ++            + L     
Sbjct: 198 HIARFTGRAASLDAPLQLAIDAQYNGTPFTVAGTTGPVSRLTGSVAGGAPWPVDLTVSGQ 257

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257
              + + G +    +   Y+         
Sbjct: 258 GANLRVTGQIAHPREASGYALHLHATAPD 286


>gi|296840769|ref|ZP_06863410.2| AsmA family protein [Neisseria polysaccharea ATCC 43768]
 gi|296839985|gb|EFH23923.1| AsmA family protein [Neisseria polysaccharea ATCC 43768]
          Length = 739

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/380 (12%), Positives = 114/380 (30%), Gaps = 26/380 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFT---VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           R+   +  L  ++L        V       + R   ++       +KI+    I+  +LP
Sbjct: 44  RLKYAVAVLTILLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLP 102

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            P+V  K++ I +         I+   +   +  L S +I+V    +    L      KG
Sbjct: 103 RPTVILKNLTITEPGGNRTAISIKETKIGLSWKNLWSDQIQVEKWVVSGAELALTRDEKG 162

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
           V N               + +I ++   I +      + + L ++ L + +   +     
Sbjct: 163 VWNIQDLIDNPKRKA--SVNRIIIENSTIHLD--FLQERFTLKEVRLNLQSPVSSGQQFE 218

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
           S   + G      + ++ +K        N P  +     + +     + I +   GN   
Sbjct: 219 SSGILTGE---NLSASWKSKGLFISDGINPPEIS-PFHFEAETALNGHGITVSTTGNPTI 274

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300
                            +   NL L+A+   L+   + ++  +        +   + +  
Sbjct: 275 RFNADGPDAANLSLRADTAFHNLHLTAQIPTLA--LRNNNIKIETVNGTFTATADDGNFQ 332

Query: 301 EDNKTKVSQDE-----------ENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349
                K+ +             E   N      ++   L     +       +   L   
Sbjct: 333 WGGSFKLDKANLHSGIGNIGNAEISGNVKTPRLQTNFSLGSPLVWSRNNG-LEAPRLHVS 391

Query: 350 DIQYSVNKKEEKDNSHDKEN 369
            +Q +VN+  +       + 
Sbjct: 392 TLQDTVNRLPQPRFISQLDG 411


>gi|13475460|ref|NP_107024.1| asmA protein, assembly of outermembrane proteins [Mesorhizobium
           loti MAFF303099]
 gi|14026212|dbj|BAB52810.1| AsmA protein, assembly of outermembrane proteins [Mesorhizobium
           loti MAFF303099]
          Length = 617

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/340 (11%), Positives = 103/340 (30%), Gaps = 35/340 (10%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           ++RR +  +G    V+ +   T+PL       R+    + +   G ++A++G  +I + P
Sbjct: 5   LIRRGVWAIGAAVIVIALVVATLPLIASTRIVRDRIAWEMSAWSGFRVAIEGSPRIEVWP 64

Query: 61  FPSVFFKDIRID--QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
                  D+ +      D     + E + +    +  L G++      + +P +    ++
Sbjct: 65  KFRAILTDVTLSKWTDTDAPPVVEAERVEIDLSAMAALQGDVVFSTARLVRPTIRVQRTA 124

Query: 119 KGVSNWFQRKST-------------MDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSD 164
            G+                              L+K+     G ++  D        ++ 
Sbjct: 125 DGLFLPTAPTGGRIARSIDTARGVVSADPAKPNLDKLPTDAFGTVEFRDGR-----MVAS 179

Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL-KIQL 223
           +N +      ++    +  ++  +     TG +  +       +  P    A  +  + L
Sbjct: 180 VNGKDVEILSSLSGQATWAAMNSNATLSATGIWRGESVTVDAASQKPLVLFAGGMAPLTL 239

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK--------LLNLELSAKKSRLSGN 275
              A P      G          + G    A    +         +    +     +S  
Sbjct: 240 SFKAAPGTFSFDGTASM-SDNAYFDGQVKFAAPSLRRVLEWSQAGIAPSAAIGSVSISSK 298

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315
              S G ++       ++  +++        +S  +   +
Sbjct: 299 VTASAGRIKFEN---TALALDNNPGM-GALDLSLGDAQPV 334


>gi|325130741|gb|EGC53478.1| asmA family protein [Neisseria meningitidis OX99.30304]
          Length = 704

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 50/381 (13%), Positives = 120/381 (31%), Gaps = 23/381 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+ V+  L  L    +    +V       + R   ++       +KI+    I+  +LP 
Sbjct: 12  LKYVVAVLTILLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I +         ++   +   +  L S +I++    +    L       G 
Sbjct: 71  PTVILKNLTITEPGGDRTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             W  +           + +I V+   +++      +   L ++NL + +   +      
Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S    V  + +  + ++          P  +     +       + I I   G+    
Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGSPSVR 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297
                           +   NL L+A+   L+   + +   +        +       + 
Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLA--LRNNSIKIETVNGAFTAGGEYAQWDG 300

Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
           S   D K  +     N+ N   +G+      ++   LN    + E +  +    L    +
Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358

Query: 352 QYSVNKKEEKDNSHDKENQEN 372
           Q +VN+  +       +   +
Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379


>gi|325198791|gb|ADY94247.1| asmA family protein [Neisseria meningitidis G2136]
          Length = 704

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/381 (12%), Positives = 119/381 (31%), Gaps = 23/381 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  +  L  L    +    +V       + R   ++       +KI+    I+  +LP 
Sbjct: 12  LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I +         ++   +   +  L S +I++    +    L       G 
Sbjct: 71  PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             W  +           + +I V+   +++      +   L ++NL + +   +      
Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S    V  + +  + ++          P  +     +       + I I   G+    
Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGSPSVR 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297
                           +   NL L+A+   L+   + +   +        +       + 
Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPALA--LRNNSIKIETVNGAFTAGGEYAQWDG 300

Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
           S   D K  +     N+ N   +G+      ++   LN    + E +  +    L    +
Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358

Query: 352 QYSVNKKEEKDNSHDKENQEN 372
           Q +VN+  +       +   +
Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379


>gi|313202270|ref|YP_004040928.1| asma family protein [Methylovorus sp. MP688]
 gi|312441586|gb|ADQ85692.1| AsmA family protein [Methylovorus sp. MP688]
          Length = 896

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 61/361 (16%), Positives = 119/361 (32%), Gaps = 18/361 (4%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEG 85
             +  D+++           + + + G IK+   P        I I +       + ++G
Sbjct: 29  TFNPNDYKQTVINLVKEKKQRTLHLDGDIKLAFWPSIGADLGRISISEHNSDKEFAAVDG 88

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH---NVILEKI 142
           L +    LPLL  ++ V  +Y+D    N      G +N+    S  +         ++ I
Sbjct: 89  LKVSLALLPLLKKQLVVDTVYVDGVRANIVRYKDGTTNFDDLMSKDEEESEQIKFDIDGI 148

Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID--------SIKGSVIAEGT 194
           +V    + + D+ +D+   L   NL+     L     L+ D        ++K SV  +G 
Sbjct: 149 NVTNAALNVRDEMTDKQLALRKFNLKTGHVALGTPFDLASDFELEANNPAVKASVSIKGN 208

Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254
              D ++  F +          I     L      +  D+   L   E       +   A
Sbjct: 209 VLADPEQQHFAVKGLDAGIKGDI---ATLKDADLTLSGDVDARLEHMELLVDSLKLALAA 265

Query: 255 GDFSKLLNLELSAKKSRLSGN-FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313
                 L + L A + R+  +       ++ +S+ K   IL       D K      + +
Sbjct: 266 TQDGAKLKVALDAPQIRVQQDTVSGKQASINLSQEKGSDILTAKLVLADLKGSPKAVQSS 325

Query: 314 LLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENF 373
            ++   N  +  H L  T F        +        +   +N          +E Q +F
Sbjct: 326 GISGEVNVKQGEHQLQST-FNSPFTGNLETQVFDLPKLVGKIN--VNDPALPKREMQGDF 382

Query: 374 S 374
           +
Sbjct: 383 A 383


>gi|116250539|ref|YP_766377.1| hypothetical protein RL0767 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255187|emb|CAK06261.1| conserved hypothetical exported protein [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 630

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/340 (13%), Positives = 94/340 (27%), Gaps = 22/340 (6%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66
           + L    ++ +      P  I     R   E   +   G    +KG   +   P P +  
Sbjct: 29  VFLLIALALFVALRVAAPYLISTGFVRSGIEDTLSKWTGYHAEIKGSPVLEFWPTPRITL 88

Query: 67  KDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124
             I I Q           IE LS     +  L G     + ++ +P+L      KG+ +W
Sbjct: 89  NQITIRQPRESGDKLLGSIESLSADFSLIDALRGRTSFHEFHLVRPNLALTRDEKGLIDW 148

Query: 125 F---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
                                +D   +  +  + V+ G + + D +S + Y    +   I
Sbjct: 149 SYAGLLARAISGVRYENGAEVLDPDLDAEIGAVTVEDGTLVVTDIKSARTYHFDSVTADI 208

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
           +   L+      + +       +          AF         +   +L    F     
Sbjct: 209 AWPRLSGAISAVVIARINGEDLKVDFASRQPLLAFAGRNAETRTSLTSNLLTAHFQGIAS 268

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
           I      +       P    + + +G     +    SA    L  +   S   +R +   
Sbjct: 269 IANLSTLSGNITASIPDVPALLTWSGKSIPGIATLKSA---SLESDIMSSGNGLRFNNLS 325

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
           L     +++   D        +   +  +    +      
Sbjct: 326 LSLNEASATGVMD--LFTQPGKRPKIGGTLAFDQMNLKPF 363


>gi|325204655|gb|ADZ00109.1| asmA family protein [Neisseria meningitidis M01-240355]
          Length = 704

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 52/384 (13%), Positives = 118/384 (30%), Gaps = 29/384 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  +  L  L    +    +V       + R   ++       +KI+    I+  +LP 
Sbjct: 12  LKYAVAVLTILLLAAVGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I +         ++   +   +  L S +I++    +    L       G 
Sbjct: 71  PTVILKNLTITEPGGDRTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             W  +           + +I V+   +++      +   L ++NL + +   +      
Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S    V  + +  + ++          P  +     +       + I I   G+    
Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSNGIGPPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-RY 288
                           +   NL L+A+   L            +G F I     R    +
Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLALRNNSIKIETVNGAFTIGGEYARWDGSF 302

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
           KL     +S        ++S       +F     ++   LN    + E +   +   L  
Sbjct: 303 KLDKANLHSGIANIGNAEISG------SFKTPRHQTNFSLNSPLVWTENKG-LEAPRLYV 355

Query: 349 DDIQYSVNKKEEKDNSHDKENQEN 372
             +Q +VN+  +       +   +
Sbjct: 356 STLQDTVNRLPQPRFISRLDGSLS 379


>gi|254671661|emb|CBA09399.1| hypothetical protein NME_2230 [Neisseria meningitidis alpha153]
          Length = 704

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/381 (12%), Positives = 118/381 (30%), Gaps = 23/381 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  +  L  L    +    +V       + R   ++       +KI+    I+  +LP 
Sbjct: 12  LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I +         ++   +   +  L S +I++    +    L       G 
Sbjct: 71  PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             W  +           + +I V+   +++      +   L ++NL + +   +      
Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S    V  + +  + ++          P  +     +       + I I   G     
Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGTPAIR 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297
                           +   NL L+A+   L+   + +   +        +       + 
Sbjct: 243 FNAGGADTAGLGLRADTSFRNLHLTAQIPALA--LRNNSIKIETVNGAFTAGGEYAQWDG 300

Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
           S   D K  +     N+ N   +G+      ++   LN    + E +  +    L    +
Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358

Query: 352 QYSVNKKEEKDNSHDKENQEN 372
           Q +VN+  +       +   +
Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379


>gi|82703792|ref|YP_413358.1| hypothetical protein Nmul_A2679 [Nitrosospira multiformis ATCC
           25196]
 gi|82411857|gb|ABB75966.1| Protein of unknown function DUF748 [Nitrosospira multiformis ATCC
           25196]
          Length = 1065

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/378 (12%), Positives = 115/378 (30%), Gaps = 38/378 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61
           RR LIGL  +F+ +++    +  F      +   E   + ++ + + V+    I I P+ 
Sbjct: 15  RRFLIGL-SVFAGIIILFGLLSYFWLPGYAKAKLEEALSEVLHRPVTVQ---SIDIQPYT 70

Query: 62  PSVFFKDIRIDQK----EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
             +  +  RI +K    +        + L +      +      +  + +  P +     
Sbjct: 71  LELTIRGFRIGEKETSVDADKNLFSFDELYLDLSIASIAHRAPVISSVSLKGPAMRLVRE 130

Query: 118 SKGVSNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
           ++   N            R+          +  I ++ GR + +D        +SD+ + 
Sbjct: 131 AQQQFNITDLIEDFMKRPREEEEGGKSMFSVRNIVIEDGRFEFVDHVKKSQQEISDIQIG 190

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
           +              + +  V    +   +               N+  +L+I+L  +  
Sbjct: 191 VP------FIANFESAEETWVEPRFSAKVNGAPFNLTGKLRPFTTNREATLEIRLSDVDL 244

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
                +           + SG    +        ++  +    L+G       N  + + 
Sbjct: 245 T---RIDEYSPIPVGIHLLSGYVD-SELLLTFTQVDGQSPALVLTG-------NAALKKL 293

Query: 289 KLQSILPNSSTDED-NKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347
           K+++    +       +  V   E NL     + A     L E     E   +      K
Sbjct: 294 KVENHSVEAPYAATLGEFNVQLTEINLNAVKSSRAAI--VLTEIAVTPEGSAEPTLSLPK 351

Query: 348 KDDIQYSVNKKEEKDNSH 365
               +  V+ +++  +  
Sbjct: 352 LALEEIVVDIRQKNVSLR 369


>gi|308389815|gb|ADO32135.1| hypothetical protein NMBB_1947 [Neisseria meningitidis alpha710]
          Length = 704

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 52/384 (13%), Positives = 118/384 (30%), Gaps = 29/384 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+ V+  L  L    +    +V       + R   ++       +KI+    I+  +LP 
Sbjct: 12  LKYVVAVLTILLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I +         ++   +   +  L S +I++    +    L       G 
Sbjct: 71  PTVILKNLTITEPGGDRTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             W  +           + +I V+   +++      +   L ++NL + +   +      
Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S    V  + +  + ++          P  +     +       + I I   G+    
Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSNGIGPPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-RY 288
                           +   NL L+A+   L            +G F       R    +
Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLALRNNSIKIETVNGAFTAGGEYARWDGSF 302

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
           KL     +S        ++S       +F     ++   LN    + E +  +    L  
Sbjct: 303 KLDKANLHSGIANIGNAEISG------SFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYV 355

Query: 349 DDIQYSVNKKEEKDNSHDKENQEN 372
             +Q +VN+  +       +   +
Sbjct: 356 STLQDTVNRLPQPRFISRLDGSLS 379


>gi|325128761|gb|EGC51624.1| asmA family protein [Neisseria meningitidis N1568]
          Length = 704

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 52/384 (13%), Positives = 118/384 (30%), Gaps = 29/384 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  +  L  L    +    +V       + R   ++       +KI+    I+  +LP 
Sbjct: 12  LKYAVAVLTILLLAAVGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I +         ++   +   +  L S +I++    +    L       G 
Sbjct: 71  PTVILKNLTITEPGGDRTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             W  +           + +I V+   +++      +   L ++NL + +   +      
Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S    V  + +  + ++          P  +     +       + I I   G+    
Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSNGIGPPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-RY 288
                           +   NL L+A+   L            +G F I     R    +
Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLALRNNSIKIETVNGAFTIGGEYARWDGSF 302

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
           KL     +S        ++S       +F     ++   LN    + E +   +   L  
Sbjct: 303 KLDKANLHSGIANIGNAEISG------SFKTPRHQTNFSLNSPLVWTENKG-LEAPRLYV 355

Query: 349 DDIQYSVNKKEEKDNSHDKENQEN 372
             +Q +VN+  +       +   +
Sbjct: 356 STLQDTVNRLPQPRFISRLDGSLS 379


>gi|254000313|ref|YP_003052376.1| AsmA family protein [Methylovorus sp. SIP3-4]
 gi|253986992|gb|ACT51849.1| AsmA family protein [Methylovorus sp. SIP3-4]
          Length = 896

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 37/370 (10%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEG 85
             +  D+++           + + + G IK+   P        I I +       + ++G
Sbjct: 29  TFNPNDYKQTVINLVKEKKQRTLHLDGDIKLAFWPSIGADLGRISISEHNSDKEFAAVDG 88

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH---NVILEKI 142
           L +    LPLL  ++ V  +Y+D    N      G +N+    S  +         ++ I
Sbjct: 89  LKVSLALLPLLKKQLVVDTVYVDGVRANIVRYKDGTTNFDDLMSKDEEESEQIKFDIDGI 148

Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID--------SIKGSVIAEGT 194
           +V    + + D+ +D+   L   NL+     L     L+ D        ++K SV  +G 
Sbjct: 149 NVTNAALNVRDEMTDKQLALRKFNLKTGHVALGTPFDLASDFELEANNPAVKASVSIKGN 208

Query: 195 GNFDNKRSAFKIT----------ANFPAKNKAISLKIQLFPLAYPIIID-LFGNLFWNEK 243
              D ++  F +           A     +  +S  +        +++D L   L   + 
Sbjct: 209 VLADPEQQHFAVKGLDAGIKGDIATLKDADLTLSGDVDARLEHMELLVDSLKLALAATQD 268

Query: 244 QPIYSGVFSV--------------AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
                                   A           +     +  + K S   V+ S   
Sbjct: 269 GAKLKVALDAPQIRVQQDTVSGKQASINLSQEKGSDTLSAKLVLADLKGSPKAVQSSGIS 328

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLN-FSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
            +  +        +              F         ++N+    + E + +    L  
Sbjct: 329 GEVNVKQGEHQLQSTFNSPFTGNLETQVFDLPKLVGKINVNDPALPKREMQGDFAFKLHA 388

Query: 349 DDIQYSVNKK 358
           D  Q  VN  
Sbjct: 389 DAKQQLVNSD 398


>gi|241203165|ref|YP_002974261.1| AsmA family protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240857055|gb|ACS54722.1| AsmA family protein [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 630

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/340 (13%), Positives = 94/340 (27%), Gaps = 22/340 (6%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66
           + L    ++ +      P  I     R   E   +   G    +KG   +   P P +  
Sbjct: 29  VFLLIALALFVALRVAAPYLISTGFVRSGIEDALSKWTGYHAEIKGSPVLEFWPTPRITL 88

Query: 67  KDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124
             I I Q           IE LS     +  L G     + ++ +P+L      KG+ +W
Sbjct: 89  NQITIRQPRESGDKLLGSIESLSADFSLIDALRGRTSFHEFHLVRPNLALTRDEKGLIDW 148

Query: 125 F---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
                                +D   +  +  + V+ G + + D +S + Y    +   I
Sbjct: 149 SYAGLLARAISGVRYENGAEVLDPDLDAEIGAVTVEDGTLVVTDIKSAKTYHFDSVTADI 208

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
           +   L+      + +       +          AF         +   +L    F     
Sbjct: 209 AWPRLSGAISSVVIARINGQDLKVDFASRQPLLAFAGRNAETRTSLTSNLLTAHFQGIAS 268

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
           I      +       P    + + +G     +    SA    L  +   S   +R +   
Sbjct: 269 IANLSALSGNVTATIPDVPALLTWSGKSIPGIATLKSA---SLESDIMSSGNGLRFNNLS 325

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
           L     +++   D        +   +  +    +      
Sbjct: 326 LSLNEASATGVMD--LFTQPGKRPKIGGTLAFDQMNLKPF 363


>gi|221210311|ref|ZP_03583291.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
 gi|221169267|gb|EEE01734.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
          Length = 1254

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/334 (15%), Positives = 100/334 (29%), Gaps = 42/334 (12%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65
           IGLG L  +VL G      F      R   E+Q    +G+   ++   +I + P+  ++ 
Sbjct: 28  IGLGILIFLVLFGLLG--FFAAPPLIRHVAEQQLGEQLGRPATIR---RIALNPYTLNLE 82

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
             DI + ++        I  L +R  +  L  G   V ++ +D P            N+ 
Sbjct: 83  ADDIHVGERGGQGDFVDIGKLVVRPSWSSLFRGAPIVNEVRLDSPRFRIVRYDAQRFNFT 142

Query: 126 Q-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                               +  I + GGRI   D+  ++ + + D  L +         
Sbjct: 143 DLIEKFSTPSKPDSKPTPFSVSNIQINGGRIDFDDRLLNEKHVVDDWTLGVP------YI 196

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID----- 233
                     V  +    FD    A        A+++   + ++   L  P +I      
Sbjct: 197 ATLPSKTDIFVEPKLRMRFDGSPIAIDGKTKPFAQSRESEIALKFDRLDVPKLISYVPAK 256

Query: 234 LFGNLFWNEKQPIYSGVFSVAG----------DFSKLLNLELSAKKSRLSGN-------- 275
           L   +         S  F ++G                 +   A +   +          
Sbjct: 257 LPVAVTSGLLSSDLSVNFVMSGDTPALRVSGTVDLTDAKVTGPASEPLFAARGVHVAAAG 316

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
            +     +     +L   + + S D+     V +
Sbjct: 317 LEPLRNAMHFDEIRLDRPVIDLSRDKQGVLNVEK 350



 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/346 (12%), Positives = 100/346 (28%), Gaps = 49/346 (14%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +V   D ++             G+ + A  L  L   +   ++ +D+P ++     +GV 
Sbjct: 288 TVDLTDAKVTGPA-SEPLFAARGVHVAAAGLEPLRNAMHFDEIRLDRPVIDLSRDKQGVL 346

Query: 123 NWF--------------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQES 156
           N                            Q   T     ++ +  + + GG + + D+  
Sbjct: 347 NVEKLAGSPAAAPKPASAAAASAPAASGAQAADTKTPPLDLTIRHVAIDGGTVNLDDRVP 406

Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA-FKITANFPAKNK 215
                LS            + + L   +++    A+ T +    R    K   +     K
Sbjct: 407 ATPTALS---------LTKLAATLDGFALQRKTPAKYTLSTSLSRGGDLKAEGSVDVAAK 457

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA-GDFSKLLNLELSAKKSRLSG 274
            +  K+ +  LA    + L   L    +  +  G         +      L A+ +    
Sbjct: 458 QVDTKLVVDALAL---VPLQPYLGEATRARVLDGALGATINAKADWGKTPLDAQVA--DS 512

Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD------L 328
              +    +     K  +I+   +  +  K  V+     + +   +G            +
Sbjct: 513 ELSLKSLKLATPDAKAPAIVLPDARAKIAKVDVAARTAEIASVDAHGLALDVKRLKNGNI 572

Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374
           +   F    +       + +     + +     D  + KE   NF+
Sbjct: 573 DLAAFASPAQPAVPQRTVARKAQAAAPSWHYRIDALNVKEASANFT 618


>gi|126739933|ref|ZP_01755624.1| AsmA family protein [Roseobacter sp. SK209-2-6]
 gi|126719165|gb|EBA15876.1| AsmA family protein [Roseobacter sp. SK209-2-6]
          Length = 648

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/340 (12%), Positives = 95/340 (27%), Gaps = 26/340 (7%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           R L+ L  +  +V+     +   +           Q     G+K++  G +K  I P   
Sbjct: 2   RFLLRLLSVVVIVISLMLGLLFVLPGEKVAALAAAQIEAQTGRKLSFGGKVKFTIWPVLG 61

Query: 64  VFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           +    + +   +          + LS+      LL G++RV ++    P LN      G+
Sbjct: 62  IKSDGVSLSNADWAGPEPMLTAQRLSIGISASDLLRGKLRVTEVSALLPRLNLSEREDGL 121

Query: 122 SNW-------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
            NW                +   D +  V +EK+ + G  ++           +  +++ 
Sbjct: 122 GNWVLTTEGESGGNPEAVPEENKDAVLPVAIEKLTLTGAALRY-QPREGAAIEMRSIDMS 180

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
           +     +    + +             N   +   F         +   S+      + +
Sbjct: 181 LKWPDPSGTVNMDLVLRPAGEP----VNIAAEIGTFSRFLAGDVVSMGASVDATGGFMRF 236

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK-SRLSGNFKI-SDGNVRIS 286
               DL G                ++      + L     +   L  +    +DG + + 
Sbjct: 237 DGRADLNGAATGRMTAKTSDTARFLSILGLSDVALPAGLGQSITLGADMTYTTDGRLALR 296

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
              L           +    ++  E        N  +   
Sbjct: 297 DMALDL----DGNQLEGALDLATTEPLQFTVQLNADDLDF 332


>gi|126725178|ref|ZP_01741021.1| hypothetical protein RB2150_15121 [Rhodobacterales bacterium
           HTCC2150]
 gi|126706342|gb|EBA05432.1| hypothetical protein RB2150_15121 [Rhodobacterales bacterium
           HTCC2150]
          Length = 650

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/317 (13%), Positives = 93/317 (29%), Gaps = 26/317 (8%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIEG 85
                    E Q     G+ + + G I     P   V   DIRID  +          + 
Sbjct: 16  PSDRIARVVENQFQQATGRSMHIGGKISPTFFPSMGVNATDIRIDNADWAGTEPMVTAQN 75

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI----------- 134
           L++    L    G+I V  + +  P +   +++ G +NW     T               
Sbjct: 76  LAVNVSTLDFFRGKITVQGIDLKSPIIRLQVATDGRANWDFSNGTESSTNDNAVETGGGA 135

Query: 135 --HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE 192
                 ++K  +    +   D    Q Y +S LN  +     +  + + +D         
Sbjct: 136 TVPKFTIDKGEISNAHLIYDDAAGGQFYDISSLNALLQLPDFDGEAQIDVDGEMNDQSFA 195

Query: 193 GTGNFDNKRSAFKITANFPAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
             G      +         + N    A S+ ++      P+  D+  +    E   +++ 
Sbjct: 196 IKGTLAEFSTFLAGKLTPVSLNVGVGANSVSVEGNLGHAPLAADMKIDADVPELSAVFAL 255

Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
           +  VA             +K  + G+ K +       R   ++ +       +    +  
Sbjct: 256 INQVAP-----KLPLGFGQKIAVKGDLKYTPDGAVYLR---ETEIILDQNSLNADVDLFL 307

Query: 310 DEENLLNFSENGAESMH 326
            ++  L    +      
Sbjct: 308 TDKPKLRALVSADTLDF 324


>gi|15677541|ref|NP_274697.1| hypothetical protein NMB1693 [Neisseria meningitidis MC58]
 gi|7226948|gb|AAF42041.1| hypothetical protein NMB1693 [Neisseria meningitidis MC58]
 gi|316984841|gb|EFV63798.1| asmA family protein [Neisseria meningitidis H44/76]
 gi|325134773|gb|EGC57410.1| asmA family protein [Neisseria meningitidis M13399]
 gi|325138714|gb|EGC61266.1| asmA family protein [Neisseria meningitidis ES14902]
 gi|325140844|gb|EGC63354.1| asmA family protein [Neisseria meningitidis CU385]
 gi|325199713|gb|ADY95168.1| asmA family protein [Neisseria meningitidis H44/76]
          Length = 704

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/384 (13%), Positives = 117/384 (30%), Gaps = 29/384 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  +  L  L    +    +V       + R   ++       +KI+    I+  +LP 
Sbjct: 12  LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I +         ++   +   +  L S +I++    +    L       G 
Sbjct: 71  PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             W  +           + +I V+   +++      +   L ++NL + +   +      
Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S    V  + +  + ++          P  +     +       + I I   G+    
Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSNGIGPPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-RY 288
                           +   NL L+A+   L            +G F       R    +
Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPALALRNNSIKIETVNGAFTAGGEYARWDGSF 302

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
           KL     +S        ++S       +F     ++   LN    + E +  +    L  
Sbjct: 303 KLDKANLHSGIANIGNAEISG------SFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYV 355

Query: 349 DDIQYSVNKKEEKDNSHDKENQEN 372
             +Q +VN+  +       +   +
Sbjct: 356 STLQDTVNRLPQPRFISRLDGSLS 379


>gi|325145116|gb|EGC67399.1| asmA family protein [Neisseria meningitidis M01-240013]
          Length = 704

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/384 (13%), Positives = 117/384 (30%), Gaps = 29/384 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  +  L  L    +    +V       + R   ++       +KI+    I+  +LP 
Sbjct: 12  LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I +         ++   +   +  L S +I++    +    L       G 
Sbjct: 71  PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             W  +           + +I V+   +++      +   L ++NL + +   +      
Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S    V  + +  + ++          P  +     +       + I I   G+    
Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSNGIGPPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-RY 288
                           +   NL L+A+   L            +G F       R    +
Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPALALRNNSIKIETVNGAFTAGGEYARWDGSF 302

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
           KL     +S        ++S       +F     ++   LN    + E +  +    L  
Sbjct: 303 KLDKANLHSGIANIGNAEISG------SFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYV 355

Query: 349 DDIQYSVNKKEEKDNSHDKENQEN 372
             +Q +VN+  +       +   +
Sbjct: 356 STLQDTVNRLPQPRFISRLDGSLS 379


>gi|325201650|gb|ADY97104.1| asmA family protein [Neisseria meningitidis M01-240149]
 gi|325208615|gb|ADZ04067.1| asmA family protein [Neisseria meningitidis NZ-05/33]
          Length = 704

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/381 (12%), Positives = 119/381 (31%), Gaps = 23/381 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  +  L  L    +    +V       + R   ++       +KI+    I+  +LP 
Sbjct: 12  LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I +         ++   +   +  L S +I++    +    L       G 
Sbjct: 71  PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             W  +           + +I V+   +++      +   L ++NL + +   +      
Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S    V  + +  + ++          P  +     +       + I I   G+    
Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGSPSVR 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297
                           +   NL L+A+   L+   + +   +        +       + 
Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLA--LRNNSIKIETVNGAFTAGGEYAQWDG 300

Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
           S   D K  +     N+ N   +G+      ++   LN    + E +  +    L    +
Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358

Query: 352 QYSVNKKEEKDNSHDKENQEN 372
           Q +VN+  +       +   +
Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379


>gi|325132811|gb|EGC55491.1| asmA family protein [Neisseria meningitidis M6190]
          Length = 704

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/381 (12%), Positives = 119/381 (31%), Gaps = 23/381 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  +  L  L    +    +V       + R   ++       +KI+    I+  +LP 
Sbjct: 12  LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I +         ++   +   +  L S +I++    +    L       G 
Sbjct: 71  PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             W  +           + +I V+   +++      +   L ++NL + +   +      
Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S    V  + +  + ++          P  +     +       + I I   G+    
Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGSPSVR 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297
                           +   NL L+A+   L+   + +   +        +       + 
Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLA--LRNNSIKIETVNGAFTAGGEYAQWDG 300

Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
           S   D K  +     N+ N   +G+      ++   LN    + E +  +    L    +
Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358

Query: 352 QYSVNKKEEKDNSHDKENQEN 372
           Q +VN+  +       +   +
Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379


>gi|325205590|gb|ADZ01043.1| asmA family protein [Neisseria meningitidis M04-240196]
          Length = 704

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/381 (12%), Positives = 119/381 (31%), Gaps = 23/381 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  +  L  L    +    +V       + R   ++       +KI+    I+  +LP 
Sbjct: 12  LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I +         ++   +   +  L S +I++    +    L       G 
Sbjct: 71  PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             W  +           + +I V+   +++      +   L ++NL + +   +      
Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S    V  + +  + ++          P  +     +       + I I   G+    
Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGSPSVR 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297
                           +   NL L+A+   L+   + +   +        +       + 
Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLA--LRNNSIKIETVNGAFTAGGEYAQWDG 300

Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
           S   D K  +     N+ N   +G+      ++   LN    + E +  +    L    +
Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358

Query: 352 QYSVNKKEEKDNSHDKENQEN 372
           Q +VN+  +       +   +
Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379


>gi|330821927|ref|YP_004350789.1| hypothetical protein bgla_2g28610 [Burkholderia gladioli BSR3]
 gi|327373922|gb|AEA65277.1| hypothetical protein bgla_2g28610 [Burkholderia gladioli BSR3]
          Length = 1340

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/340 (13%), Positives = 97/340 (28%), Gaps = 47/340 (13%)

Query: 3   RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           RRV +G+     V  L+G F  P  I     R   E+Q +  + +   +    +I + P+
Sbjct: 30  RRVALGILIFLVVFGLLGFFAAPPLI-----RHIAEQQLSRQLDRPATIA---RIALNPY 81

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I ++        I  L++R  +  LL G   V ++ ID P  +       
Sbjct: 82  TLRLEADGVHIGERGGQGPFVDIGKLTVRPAWSSLLRGAPIVDEVRIDAPRFHIVRYDAQ 141

Query: 121 VSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
             N+           + +        +  I V  GRI   D+     + +    L +   
Sbjct: 142 RFNFTDLIEKFSKPSQPSSSGPTRFSVSNIQVTDGRIDFDDRLLGARHVVDQWTLGVPFV 201

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
                           V        D    A        ++ +   + ++   L  P ++
Sbjct: 202 ATLPSKTDIF------VQPTLKLRLDGSPIAITGKTKPFSQTRESEINLKFDGLDVPKLL 255

Query: 233 D--------------------LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
                                L  ++         SG   +A                 +
Sbjct: 256 SYAPARLPVQMSSGRLSSDLVLRFSIDGETPALRVSGTVDLADANLSDAANHPLFAARAV 315

Query: 273 ---SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
              +G+ +     +     ++ + +   + D      V +
Sbjct: 316 HVAAGSLEPLRQVLHFDEIRVDAPVLTLTRDAAGVLNVQK 355


>gi|319410946|emb|CBY91341.1| putative AsmA-like protein [Neisseria meningitidis WUE 2594]
          Length = 704

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/384 (13%), Positives = 117/384 (30%), Gaps = 29/384 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  +  L  L    +    +V       + R   ++       +KI+    I+  +LP 
Sbjct: 12  LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-ARTHRKISFDADIQRRLLPR 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I +         ++   +   +  L S +I++    +    L       G 
Sbjct: 71  PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             W  +           + +I V+   +++      +   L ++NL + +   +      
Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S    V  + +  + ++          P  +     +       + I I   G+    
Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSNGIGPPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-RY 288
                           +   NL L+A+   L            +G F       R    +
Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLALRNNSIKIETVNGAFTAGGEYARWDGSF 302

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
           KL     +S        ++S       +F     ++   LN    + E +  +    L  
Sbjct: 303 KLDKANLHSGIANIGNAEISG------SFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYV 355

Query: 349 DDIQYSVNKKEEKDNSHDKENQEN 372
             +Q +VN+  +       +   +
Sbjct: 356 STLQDTVNRLPQPRFISRLDGSLS 379


>gi|170692371|ref|ZP_02883534.1| AsmA family protein [Burkholderia graminis C4D1M]
 gi|170142801|gb|EDT10966.1| AsmA family protein [Burkholderia graminis C4D1M]
          Length = 884

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 98/324 (30%), Gaps = 32/324 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDI 69
              L  DW   R     + T  +G++  + G +K+              +P+P     +I
Sbjct: 31  VFILTFDWNRARPYVNDKVTQAIGRQFTINGDLKVGLRRPVGETGLKSWVPWPRFSAANI 90

Query: 70  RIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ- 126
            I   +       + ++ +  + + LPLL+ +I +  + +  P ++      G +NW   
Sbjct: 91  TIANPDWAKRPQFATLDEIDFQVKVLPLLAHDIVIPAINLVNPSVDLERMLDGRNNWTFE 150

Query: 127 -RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF---------LSDLNLQISARFLNI 176
             KS       + L  I    G I + DQ+               +            + 
Sbjct: 151 LPKSKTPSQWKLQLHDIVFAKGNIALSDQQKKVDAQMVVDTLGQPIPIGEAMKQQEEASR 210

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL-- 234
            +        G+       +     +A   +A       A  +       A      L  
Sbjct: 211 KASAEAVGKDGAKKLSAQADAQAASAASAASAAAARGASATDVHASGTTAATGASGGLVA 270

Query: 235 ---FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
               G       +   SG    +       +   ++  +  +G  + SD N     ++  
Sbjct: 271 GGSKGASATASARSGASGAVGTSAATPS--DARGASTANGANGANRASDANGTSGTHEAN 328

Query: 292 SILPNSSTDEDNKTKVSQDEENLL 315
                S+T+  +    +++ +  L
Sbjct: 329 GANEASNTNPASAANTARNGKPDL 352


>gi|296114596|ref|ZP_06833249.1| AsmA family protein [Gluconacetobacter hansenii ATCC 23769]
 gi|295978952|gb|EFG85677.1| AsmA family protein [Gluconacetobacter hansenii ATCC 23769]
          Length = 801

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 52/384 (13%), Positives = 98/384 (25%), Gaps = 65/384 (16%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDI 69
             L   + V    + +   W  F    ER+A   + +K+ +   + +H      V   D+
Sbjct: 48  AILAGSLCVAVLALVILWSWDWFIPLVERRAGAAIHRKVTIA-HLHVHPGRVIRVGADDV 106

Query: 70  RIDQKEDG---SFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
           RI+Q          +    L +   + PLL  G + +  + +D P +     + G +N+ 
Sbjct: 107 RIEQPAGFDDLPPFATARRLDVSIRWWPLLWGGGLDLPLIALDTPVVEIRERADGSTNYD 166

Query: 126 --------------------------------------------QRKSTMDMIHNVILEK 141
                                                        +   M          
Sbjct: 167 FSAPDIKPDPGTKGTKTPDAASAAVKATGTTGTSKADGATSTTTAQPDAMTGGGTPSKGA 226

Query: 142 IHVKGG------RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195
                G      RI  I   + Q++ +           +    P +    +  V A+GT 
Sbjct: 227 SATTDGDATTIPRIGAIRIANGQLHVVHAGLHTDMRGAVRTTDPANGQDARLLVDAQGTY 286

Query: 196 NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255
                   F        +N+     + L        + L G +             S+AG
Sbjct: 287 VRQAITGHFSGGTLVSLQNRTQPYPVDLDIRHGATRLTLRGTIDDPLTLAGARLRLSLAG 346

Query: 256 DFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD 310
               LL              R+ GN   S  ++R           +          +   
Sbjct: 347 PDMSLLYPLTGVVIPQTPPYRVVGNLDYSAAHIRFRDLDGHVGSSD----LGGNLSIDPH 402

Query: 311 EENLLNFSENGAESMHDLNETDFF 334
           +        +      DL +   F
Sbjct: 403 QAVPF-VDADLHSRRVDLADLGGF 425


>gi|304386827|ref|ZP_07369091.1| AsmA family protein [Neisseria meningitidis ATCC 13091]
 gi|304339081|gb|EFM05171.1| AsmA family protein [Neisseria meningitidis ATCC 13091]
          Length = 704

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/381 (12%), Positives = 119/381 (31%), Gaps = 23/381 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  +  L  L    +    +V       + R   ++       +KI+    I+  +LP 
Sbjct: 12  LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I +         ++   +   +  L S +I++    +    L       G 
Sbjct: 71  PTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             W  +           + +I V+   +++      +   L ++NL + +   +      
Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S    V  + +  + ++          P  +     +       + I I   G+    
Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSNGIGPPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297
                           +   NL L+A+   L+   + +   +        +       + 
Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLA--LRNNSIKIETVNGAFTAGGEYAQWDG 300

Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
           S   D K  +     N+ N   +G+      ++   LN    + E +  +    L    +
Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358

Query: 352 QYSVNKKEEKDNSHDKENQEN 372
           Q +VN+  +       +   +
Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379


>gi|206564518|ref|YP_002235281.1| hypothetical protein BCAM2680 [Burkholderia cenocepacia J2315]
 gi|198040558|emb|CAR56544.1| putative membrane protein [Burkholderia cenocepacia J2315]
          Length = 1274

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 50/340 (14%), Positives = 102/340 (30%), Gaps = 47/340 (13%)

Query: 3   RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           RR+ IG+     +  L+G F  P  I     R   E+Q +  + +   ++   +I + P+
Sbjct: 26  RRIGIGVLIFVVLFGLLGFFAAPPLI-----RHVAEQQLSKQLDRPATIQ---RIALNPY 77

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             ++    I + ++        I  L +R  +  L  G   V ++ +D P  +       
Sbjct: 78  TLNLEADGIHLGERGGQGDFIDIGKLVVRPSWSSLFRGAPIVNEVRLDSPRFHIVRYDAQ 137

Query: 121 VSNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
             N+                      +  I V  GRI   D+  ++ + + +  L I   
Sbjct: 138 RFNFTDLIEKFSSPTPKPDSKPTQFSVSNIQVNDGRIDFDDRLLNEKHVVDNWTLGIP-- 195

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
                           V  +    FD    +        A+++   + ++   L  P +I
Sbjct: 196 ----YIATLASKTDIFVEPKLRARFDGSPISIDGKTKPFAQSRESEIALKFDRLDVPKLI 251

Query: 233 D--------------LFGNLFWNEKQPIYSGVFSVAG-DFSKLLNLELSAKKSRLSGN-- 275
                          L  NL  N      +    V+G        +   A     +    
Sbjct: 252 SYVPAKLPVAVTSGLLSSNLTVNFVMSGETPALRVSGTVDLNDAKVTDRASAPLFAARGV 311

Query: 276 ------FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
                  +     +     +L   + + S D+     V +
Sbjct: 312 HVAAAGLEPLRNAMHFDEIRLDQPVIDLSRDKQGVLNVEK 351



 Score = 42.2 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 86/312 (27%), Gaps = 63/312 (20%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +V   D ++  +          G+ + A  L  L   +   ++ +DQP ++     +GV 
Sbjct: 289 TVDLNDAKVTDRASA-PLFAARGVHVAAAGLEPLRNAMHFDEIRLDQPVIDLSRDKQGVL 347

Query: 123 NWFQRKSTM--------------------------------------------DMIHNVI 138
           N  +  +                                                  ++ 
Sbjct: 348 NVEKLVAQPAAAPKVEAGAGKPAASAVAAASGASGAVAAASGAKAERSAAAKEAPPLDLT 407

Query: 139 LEKIHVKGGRIKIID--QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196
           +  + + GG I + D    +     L+ L   +    L   +P    ++  S+   G   
Sbjct: 408 IRHVAIDGGTINVDDRVPATPTAMSLTKLAATLDGFSLQGKTPAKY-TLSTSLSRGGDVT 466

Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF-SVAG 255
            +   +     A+      A++L              L   L    +  +  G   +   
Sbjct: 467 AEGAFNLAAKQADTKLTVAALALPA------------LQPYLGEATRARVLDGTLGATVN 514

Query: 256 DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315
             +      L+A+ +       +    +     K  +I+   ++ +  K  V+     + 
Sbjct: 515 AKTDWGKTPLAAEVA--DSTVSLKSLKIAAPDNKAPAIVLPDASAKIAKVDVAARTAEIA 572

Query: 316 NFSENGAESMHD 327
           +   +G      
Sbjct: 573 SVDASGLALDVK 584


>gi|317153118|ref|YP_004121166.1| AsmA family protein [Desulfovibrio aespoeensis Aspo-2]
 gi|316943369|gb|ADU62420.1| AsmA family protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 1051

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 53/386 (13%), Positives = 114/386 (29%), Gaps = 63/386 (16%)

Query: 1   MLRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           M+RR    +   L      V  G F    ++D   FR      A  +VG+ + + G + I
Sbjct: 1   MIRRVGVFLFEVLVACVLAVTAGLFWASHYVDSEGFRLRLTALAEEMVGRPVTLNGEVDI 60

Query: 57  HILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            + P PS+    + +        +  ++I+ L +    LPL SG + +  + +     + 
Sbjct: 61  ALYPMPSLEISGLAVADDPEFGSAPLAEIDTLYVSVRLLPLFSGRVEIPSLLVHGMRAHV 120

Query: 115 YLSSKGVSNWFQ-----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
             S  G  NW                +   I  V ++++ V    +   D++    + LS
Sbjct: 121 VRSKLGAINWAMLLDTERTRDFSSVDSAFGIETVFIDEVEVVEASVTYTDRKDGVQFALS 180

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVI--AEGTGNFDNKRSAFKITANFPAKNKAISLKI 221
            + L+          P  + S         +          A +  + F  K+ ++S  +
Sbjct: 181 GITLRTGGVHAGQRVPFVVSSSFSWDDGGIKSQLILKGMIQADEDWSGFTLKDASVSGTV 240

Query: 222 QLFPLAYPII---------IDLF-GNLFWNEKQPIYSGVFSVAGDFSKLLNLE------- 264
               L              +D+  G +  +  +  + G+ +     S  L          
Sbjct: 241 GGRFLPRGASPGEMVARLVVDMDKGTVGLDGLRIRFLGMLAEGSLQSGDLGSAPGVTGRI 300

Query: 265 -----------------------LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
                                     +++  + +  I    V ++               
Sbjct: 301 EVQPFVPATVISRYYPNIPVAKVDGLRRAAFAASLAIDGKGVSLTDMTATL----DDLTL 356

Query: 302 DNKTKVSQDEENLLNFSENGAESMHD 327
                +   + +   F  +G     D
Sbjct: 357 RGHAGLKGFDAHRYEFDLHGDTLDLD 382


>gi|157962230|ref|YP_001502264.1| AsmA family protein [Shewanella pealeana ATCC 700345]
 gi|157847230|gb|ABV87729.1| AsmA family protein [Shewanella pealeana ATCC 700345]
          Length = 612

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 112/357 (31%), Gaps = 36/357 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +      L  +VL     V +  D  DF+           G+++A+   +     P 
Sbjct: 1   MKFLKWFFITLLGLVLALVLYVTVIFDPNDFKPQIVELVKKQTGRELAIGSDLSWTFFPS 60

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    I +   E         +  +      +PLL  E+ +  + +D   L       
Sbjct: 61  LGIELGKITLSNPEGFKNASMVSVNQVVAEVALMPLLKKEVEISQLNLDGLTLMLETQKD 120

Query: 120 GVSNWFQRKSTMD-----------------MIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           G +++       D                  +  + +  I +   +I  ID  S      
Sbjct: 121 GRNSFDGLAGNADKKSVSKGATQNTASSHATLARLDIGGIAITNTQITNIDHLSQSEQVF 180

Query: 163 SDLNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218
           +   L +    L   +PL  +        +V ++G G     +    IT N    N  ++
Sbjct: 181 ALKELTLGRFQLGEFAPLKYEFAATMPDMAVTSQGEGQIKVAQDLQTITINDFVVNNQVT 240

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA----KKSRLSG 274
            +         +  DL  +L     +   S V S     +   N +L      K  ++  
Sbjct: 241 GE---GIPNGSLKADLTTSLVVALDKQTLSLVLSSFSAANINANGKLDIAYGSKVPQVVA 297

Query: 275 NFKISDGNVR--ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
             ++ D ++   + +++ ++   +   D     K S+  E  L           D++
Sbjct: 298 KLEVGDVDLDALLPKHEGEAAKQDKPKD-KPTAKPSKAIEPDLTAM---KSVNLDVD 350


>gi|163734117|ref|ZP_02141558.1| AsmA family protein [Roseobacter litoralis Och 149]
 gi|161392653|gb|EDQ16981.1| AsmA family protein [Roseobacter litoralis Och 149]
          Length = 650

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/371 (9%), Positives = 102/371 (27%), Gaps = 42/371 (11%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIEGLS 87
                    Q ++  G+ +A+ G + +   P   V   D+ +            +    +
Sbjct: 28  DRLARIATEQLSVATGRDVAINGDVALTFWPVLGVSADDLEVSNAGWADQGPMLQAANAA 87

Query: 88  MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMD--------------- 132
           +  + + LL G+IR+ ++    P +       G ++W    +                  
Sbjct: 88  IGIDVMALLRGDIRITNVEAHSPTIRLEQRLDGRASWEFTNAEDSAQIKTTTEAKTDQSE 147

Query: 133 ----MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188
                  ++ +E++ V    +   D E   +  L+ ++L +        + +S      +
Sbjct: 148 TVAAESRSISIERLSVTDATLIY-DAEGSDLVTLAGVDLALDWPDPAGPAEISATVRPAN 206

Query: 189 VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248
           V        +                +   +K+ +   A  + ++   +         ++
Sbjct: 207 VPVSIDAEIEGF--------GDFITGETRGVKVTVAAPAGQMSLNGRAS-TAGAVAGAFA 257

Query: 249 GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS--RYKLQSILPN-SSTDEDNKT 305
                   F   L L   A   +L     ++         +  L+ +  +          
Sbjct: 258 FKTDNTEAFLAALGLPGVALPPKLGQQIDVAADITLTPDRQLALRGLALDLHGNRLSGAA 317

Query: 306 KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSH 365
            +S +    +N      +      ++          +               +    +  
Sbjct: 318 DISLNGIPTVNVQLAAGDLDLTPAQSA--------PRTSGSSGGQGGAETTSEGWSKSPI 369

Query: 366 DKENQENFSGD 376
           D     +F+GD
Sbjct: 370 DASALASFNGD 380


>gi|261392082|emb|CAX49579.1| putative AsmA-like protein [Neisseria meningitidis 8013]
          Length = 704

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 49/381 (12%), Positives = 118/381 (30%), Gaps = 23/381 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  +  L  L    +    +V       + R   ++       +KI+    I+  +LP 
Sbjct: 12  LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I +         ++   +   +  L S +I++    +    L       G 
Sbjct: 71  PTVILKNLTITEPGGDRTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             W  +           + +I V+   +++      +   L ++NL + +   +      
Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S    V  + +  + ++          P  +     +       + I I   G     
Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGTPAIR 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297
                           +   NL L+A+   L+   + +   +        +       + 
Sbjct: 243 FNAGGADTAGLGLRADTSFRNLHLTAQIPALA--LRNNSIKIETVNGAFTAGGEYAQWDG 300

Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
           S   D K  +     N+ N   +G+      ++   LN    + E +  +    L    +
Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358

Query: 352 QYSVNKKEEKDNSHDKENQEN 372
           Q +VN+  +       +   +
Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379


>gi|325142877|gb|EGC65244.1| asmA family protein [Neisseria meningitidis 961-5945]
          Length = 704

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/381 (12%), Positives = 118/381 (30%), Gaps = 23/381 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  +  L  L    +    +V       + R   ++       +KI+    I+  +LP 
Sbjct: 12  LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I +         ++   +   +  L S +I++    +    L       G 
Sbjct: 71  PTVILKNLTITEPGGDRTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             W  +           + +I V+   +++      +   L ++NL + +   +      
Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S    V  + +  + ++          P  +     +       + I I   G+    
Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEASTSLDGHGITISTTGSPSVR 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297
                           +   NL L+A+   L+   + +   +        +       + 
Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLA--LRNNSIKIETVNGAFTAGGEYAQWDG 300

Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
           S   D K  +     N+ N   +G+      ++    N    + E +  +    L    +
Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSFNSPLVWTENKGLDA-PRLYVSTL 358

Query: 352 QYSVNKKEEKDNSHDKENQEN 372
           Q +VN+  +       +   +
Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379


>gi|94265338|ref|ZP_01289093.1| Uncharacterized protein involved in outer membrane biogenesis-like
           [delta proteobacterium MLMS-1]
 gi|93454148|gb|EAT04475.1| Uncharacterized protein involved in outer membrane biogenesis-like
           [delta proteobacterium MLMS-1]
          Length = 481

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 101/291 (34%), Gaps = 13/291 (4%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           + R  L+    LF ++ +    +   +     +   ER A   +G ++ + G + +  LP
Sbjct: 6   IRRTWLVATVGLFIIIALILAALLAALQSDAAKARLERTAADALGMEVKIGGRLGLAFLP 65

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             +V   D+R+ + ++    +  E + +    LPLL  E+R+  + ++   +      +G
Sbjct: 66  DLAVTLHDVRLGEHDN--ELAWAERVRLGVGLLPLLRREVRIKQLTVENSRITIQRDPEG 123

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-------VYFLSDLNLQISARF 173
             N+       + +  + L  I +    ++ +DQ+S +          + +L L    + 
Sbjct: 124 RFNFQSPAPNGESLAALELPTIFLTAATLRYVDQQSGEQFAAEGCQLTVPELRLAEGEKS 183

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
             + +      +    I       D+ + +               L ++LF       + 
Sbjct: 184 ALLENLTVRAELNCQTIRRDELRLDDLQLSVVGREGRFEVE---PLGLELFGARGEGALL 240

Query: 234 LFGNLFWNEKQPIYSG-VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
                     +  Y    F VA  F  L   E++     L+    +    +
Sbjct: 241 ADFTGPAPNYEIRYFLPQFQVADFFQVLTQEEIATGTMDLTVELAMQGETM 291


>gi|309781032|ref|ZP_07675770.1| membrane protein [Ralstonia sp. 5_7_47FAA]
 gi|308920098|gb|EFP65757.1| membrane protein [Ralstonia sp. 5_7_47FAA]
          Length = 1266

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 104/333 (31%), Gaps = 35/333 (10%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65
           IG+G L  +V+ G      F      R   + Q + ++ + ++V    KI I P+   + 
Sbjct: 52  IGIGVLVFLVVFGLLGA--FGGPPLLRHVAQTQLSKLLERPVSVG---KISINPYTLRLD 106

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
                + +++  +    +  L M A +  +      + ++ ID PH+    +++   N+ 
Sbjct: 107 VDQFHVTERDGKTPFVDVGHLHMNASWSSIFRRAPVIEELSIDAPHVRIVRTAEQRFNFS 166

Query: 126 -----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                        K   +     +   + +  G I   DQ     + +  L + +     
Sbjct: 167 DIVDKLSQPETAPKPKSNEPARFVFANLQLTNGAIDFADQPLGAQHKVDGLQIGVPFL-- 224

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
               P  +D     ++A      D     F       A++   +L I++  L  P  +  
Sbjct: 225 -ASLPADVDIFVQPLLA---ARIDGAPLHFAGKTKPFAESLESNLNIKIDGLDLPRYL-- 278

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
            G +       +  G  +      +    +  A   R+ G   +    V           
Sbjct: 279 -GYVPGPLPVAVPQGKLTTD-LTIEFQKPKSGAPVLRVHGTTGLDHLEV--------VDA 328

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
             +      + + +  +   L+          D
Sbjct: 329 RKAPLVAAKQVRATLADVRPLDNVFRLDALTLD 361


>gi|241662450|ref|YP_002980810.1| hypothetical protein Rpic12D_0837 [Ralstonia pickettii 12D]
 gi|240864477|gb|ACS62138.1| protein of unknown function DUF748 [Ralstonia pickettii 12D]
          Length = 1266

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/333 (13%), Positives = 104/333 (31%), Gaps = 35/333 (10%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65
           IG+G L  +V+ G      F      R   + Q + ++ + ++V    KI I P+   + 
Sbjct: 52  IGIGVLVFLVVFGLLGA--FGGPPLLRHVAQTQLSKLLERPVSVG---KISINPYTLRLD 106

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
                + +++  +    +  L M A +  +      + ++ ID PH+    +++   N+ 
Sbjct: 107 VDQFHVTERDGKTPFVDVGHLHMNASWSSIFRRAPVIEELSIDAPHVRIVRTAEQRFNFS 166

Query: 126 -----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                        K   +     +   + +  G I  +DQ     + +  L + +     
Sbjct: 167 DIVDRLSQPENPPKPKSNEPARFVFANLQLANGAIDFVDQPLGTQHKVDGLQIGVPFL-- 224

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
               P  +D     ++A      D     F       A +   +L +++  L  P  +  
Sbjct: 225 -ASLPADVDIFVQPLLA---ARIDGAPLHFAGKTKPFADSLESNLNVKIDGLDLPRYL-- 278

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
            G +       +  G  +           +  A   R+ G   + +  V           
Sbjct: 279 -GYVPGPLPVGVPQGKLTTD-LTIDFQKPKSGAPILRVRGTTGLDNLEV--------VDA 328

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
             +      + + +  +   L+          D
Sbjct: 329 NKAPLVAAKQVRATLADVRPLDNVFRLDALTLD 361


>gi|213161356|ref|ZP_03347066.1| hypothetical protein Salmoneentericaenterica_15537 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
          Length = 649

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/331 (10%), Positives = 89/331 (26%), Gaps = 45/331 (13%)

Query: 36  FERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIRIDQKEDGS--FES 81
             ++ +  + +  A++G + +              +P+P V  +D+ +    D       
Sbjct: 1   INQKVSTELNRPFAIRGDLGVVWERQKQESGWRSWVPWPHVHAEDVILGNPPDIPEVTMV 60

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--------RKSTMDM 133
            +  +      L LL+  + +  + + +P       S+  +NW            +    
Sbjct: 61  HLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQDKNTDPNAKPS 120

Query: 134 IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS----- 188
             +  L+ I    GRI I D+ S     +  ++        + ++     + K +     
Sbjct: 121 AWSFRLDNILFDQGRIAIDDKVSKADITIL-VDPLGKPLPFSEVTGTKGKADKSTVGDYV 179

Query: 189 VIAEGTGNFDNKRSAFKITAN--FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
              +  G ++ +              ++++    +Q    +    +   G +    K   
Sbjct: 180 FGLKAQGRYNGEPLTGTGKIGGMLALRSESTPFPVQADFRSGNTRVAFSGVVNEPMKMGG 239

Query: 247 YSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNV-RISRYKLQSILPN 296
                  +GD    L                  RL         +V     +  +    +
Sbjct: 240 VDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSSVFNYRGFNGRIGDSD 299

Query: 297 SSTDEDNKTKVSQD-EENLLNFSENGAESMH 326
                      +       L       +   
Sbjct: 300 ----IHGTFTYTTGKPSPKLEGDVESRQLRL 326


>gi|78061018|ref|YP_370926.1| hypothetical protein Bcep18194_B0166 [Burkholderia sp. 383]
 gi|77968903|gb|ABB10282.1| protein of unknown function DUF748 [Burkholderia sp. 383]
          Length = 1264

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 50/340 (14%), Positives = 100/340 (29%), Gaps = 47/340 (13%)

Query: 3   RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           RR+ IGL     +  L+G F  P  I     R   E+Q +  + +   ++   +I + P+
Sbjct: 26  RRIGIGLLIFLVLFGLLGFFAAPPLI-----RHIAEQQLSQQLDRPATIQ---RIALNPY 77

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             ++    I +  K        I  L +R  +  L  G   V ++ +D P  +       
Sbjct: 78  TLNLEADGIHLGDKGGQGDFIDIAKLVVRPSWSSLFRGAPIVNEVRLDSPRFHIVRYDAQ 137

Query: 121 VSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
             N+                      +  I V  GRI   D+  ++ + + +  L I   
Sbjct: 138 RFNFTDLIEKFSKPSPKPESKPTQFSVSNIQVNNGRIDFDDRLLNEKHVVDNWTLGIPYV 197

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
                           V  +    FD    A        A+++   + ++   L  P +I
Sbjct: 198 ATLASKTDIF------VEPKLRARFDGSPIAIDGKTKPFAQSRESEIALKFDGLDVPKLI 251

Query: 233 D-----LFGNLFWNEKQPIYSGVFSVAG----------DFSKLLNLELSAKKSRLSGN-- 275
                 L   +            F ++G             K   +   A     +    
Sbjct: 252 SYVPAKLPVAVTSGLLSSDLKVNFVMSGETPALRVSGTVDLKDAKVTDHASAPLFAARGV 311

Query: 276 ------FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
                  +     +     ++   + + S D+     V +
Sbjct: 312 HVAAASLEPLRNAMHFDEIRIDQPVVDLSRDKQGVLNVEK 351



 Score = 47.6 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 45/360 (12%), Positives = 103/360 (28%), Gaps = 63/360 (17%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +V  KD ++             G+ + A  L  L   +   ++ IDQP ++     +GV 
Sbjct: 289 TVDLKDAKVTDHASA-PLFAARGVHVAAASLEPLRNAMHFDEIRIDQPVVDLSRDKQGVL 347

Query: 123 NWF----------------------------------------QRKSTMDMIHNVILEKI 142
           N                                             +      ++ +   
Sbjct: 348 NVEKLAAQPAAASKAAEGKPAASGIAAASAAAVATASGAKAEAAADAKEAPPLDLTIRHF 407

Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202
            + GG + + D+       LS            + + L   +++G   A+ T +    R 
Sbjct: 408 AIDGGTVNVDDRVPATPTALS---------LTKLAATLDGFTMQGKTPAKYTLSTSLSRG 458

Query: 203 A-FKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF-SVAGDFSKL 260
                   F    K +  K+ +  LA P    L   L    +  +  G   +     +  
Sbjct: 459 GDVNAEGTFNLAEKQVESKLTVAALALPA---LQPYLGEATRARVLDGTLGATVNAKADW 515

Query: 261 LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320
               L+A+ +       +    +     K  +I+   ++ +  K  V+     + +   +
Sbjct: 516 GKTPLAAQVA--DSTVSLKSLKIATPDAKAPAIVLPDASAKIAKVDVATRTAEIASVDVS 573

Query: 321 GAESMH------DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374
           G            ++     E  +       + +     + +     D  + K++  NF+
Sbjct: 574 GLALDVQRLKDGKIDLAALAEPAQASVPKRTVARKAEAAAPSWHYRIDALNVKDSSANFT 633


>gi|161870541|ref|YP_001599713.1| hypothetical protein NMCC_1606 [Neisseria meningitidis 053442]
 gi|161596094|gb|ABX73754.1| conserved hypothetical protein [Neisseria meningitidis 053442]
          Length = 704

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 49/381 (12%), Positives = 119/381 (31%), Gaps = 23/381 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  +  L  L    +    +V       + R   ++       +KI+    I+  +LP 
Sbjct: 12  LKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLPR 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I +         ++   +   +  L S +I++    +    L       G 
Sbjct: 71  PTVILKNLTITEPGGDRTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAELALTR--DGK 128

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             W  +           + +I V+   +++      +   L ++NL + +   +      
Sbjct: 129 GVWNIQDLIDSQKRQASVNRIIVENSTVRLN--FLQEQLILKEINLNLQSPDSSGQ---P 183

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S    V  + +  + ++          P  +     +       + I I   G+    
Sbjct: 184 FESSGILVWGKLSVPWKSRGLFLSNGIGPPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI----LPNS 297
                           +   NL L+A+   L+   + +   +        +       + 
Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPTLA--LRNNSIKIETVNGAFTAGGEYAQWDG 300

Query: 298 STDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
           S   D K  +     N+ N   +G+      ++   LN    + E +  +    L    +
Sbjct: 301 SFKLD-KANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDA-PRLYVSTL 358

Query: 352 QYSVNKKEEKDNSHDKENQEN 372
           Q +VN+  +       +   +
Sbjct: 359 QDTVNRLPQPRFISRLDGSLS 379


>gi|161524876|ref|YP_001579888.1| AsmA family protein [Burkholderia multivorans ATCC 17616]
 gi|189350374|ref|YP_001946002.1| hypothetical protein BMULJ_01539 [Burkholderia multivorans ATCC
           17616]
 gi|160342305|gb|ABX15391.1| AsmA family protein [Burkholderia multivorans ATCC 17616]
 gi|189334396|dbj|BAG43466.1| hypothetical protein BMULJ_01539 [Burkholderia multivorans ATCC
           17616]
          Length = 782

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 62/157 (39%), Gaps = 16/157 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIR 70
                DW   R   + + +  +G+  A+ G + +              + +P+   ++I 
Sbjct: 36  FIFTFDWNRARPLVDDKVSAAIGRPFAINGDLTVRWHRAAGETGWRAWVLWPTFVARNIT 95

Query: 71  IDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128
           I   +     + + ++ +  + + LPLL+ +I +  + +  P ++    + G +NW  + 
Sbjct: 96  IANPDWTKQRYFATLDQIDFQVKMLPLLAHDIVIPTINLISPSVDLERLADGRNNWTFKF 155

Query: 129 STMDMI--HNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            +        + L  I +  G I + DQ+      ++
Sbjct: 156 KSSAHPLAWKLDLHDIRLDKGNIALSDQQKGLAMQVT 192


>gi|296137127|ref|YP_003644369.1| AsmA family protein [Thiomonas intermedia K12]
 gi|295797249|gb|ADG32039.1| AsmA family protein [Thiomonas intermedia K12]
          Length = 753

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/275 (10%), Positives = 88/275 (32%), Gaps = 17/275 (6%)

Query: 16  VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE 75
           V+ G   + L  D   ++    +       + + + G I++ + P  ++      + +++
Sbjct: 18  VVGGMSILLLTFDPNQYKATLIQVVQEREHRTLTLPGTIELTLFPPLTLRTGPFSLSERD 77

Query: 76  DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-------QRK 128
             +  ++ + L +  +   LL  ++ V  + + +P ++    ++G  N+           
Sbjct: 78  SPAVFARADDLRLHLDLFALLRRKLVVDRVVMIKPQIHVARDAQGRFNFADLLPDSKPES 137

Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID----- 183
           ++      + + ++ V+ G +   D ++     L  L++ +S           ++     
Sbjct: 138 ASPRSPLGLSVHRLQVEQGVLFYDDDKAKLHGQLDGLDVGLSGLDGGNAGAFHLETTARF 197

Query: 184 ---SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
              ++   +   G    D  + +  +T    +    +     +        + L     W
Sbjct: 198 VQPALATRIALRGKLLADPAQHSVALTDLALSAQGDVPGLKAMQTQLNADQLGLRTGSLW 257

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
                 +       G      NL        L   
Sbjct: 258 ALTARQW--RIKTTGRTESGENLSAQISLPTLEAK 290


>gi|56479039|ref|YP_160628.1| hypothetical protein ebA6298 [Aromatoleum aromaticum EbN1]
 gi|56315082|emb|CAI09727.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 1227

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 94/292 (32%), Gaps = 28/292 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61
           R V    G +  + ++G   +P        R    R     +G+ + ++   K+ I PF 
Sbjct: 19  RPVKWIAGIVVVIAILGFLILPPV-----ARHFGARLLGDSIGRTVTIE---KVRINPFA 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+      I + +          L    E   LL G   + ++ +++P  +      G 
Sbjct: 71  LSMTVSGFNIAEADGQGNALSFGTLYANLEAESLLRGGPVLRELRLERPQAHLVRLDGGR 130

Query: 122 SNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
            NW           ++          L  I V  G++ + D+     + LS +N+ +   
Sbjct: 131 HNWSDVLERFAAKPQQEEKKGEARFSLNNIRVIDGKLLVEDRPVGLEHELSAINIGLPFL 190

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
                           V  E +   + +       +   A ++  +L I L    +   +
Sbjct: 191 SNLPSKVELF------VEPELSALVNGRPLQVTGQSRPFAPDRETALGIDLDGFDFTPYL 244

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                L ++    +  G  +             +  K  L+G+ +++D  + 
Sbjct: 245 ---AYLPFDAAFKVPEGRLT-TRLRLAFSQPPEATPKVALTGSVELADLRLE 292


>gi|167905219|ref|ZP_02492424.1| hypothetical protein BpseN_23449 [Burkholderia pseudomallei NCTC
           13177]
          Length = 365

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 87/287 (30%), Gaps = 27/287 (9%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66
           G+G L  +V  G      F      R   E+Q +  + +   +    +I   P+   +  
Sbjct: 28  GVGALIVLVAFGLLG--FFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEA 82

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125
             +R+ ++        I  L +RA +  L      + ++ +DQP            N+  
Sbjct: 83  DGVRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTD 142

Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                               +  I V  GRI+  D+  ++ + +    + I         
Sbjct: 143 LVDKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNEKHVVDQWTVGIPFIATLPSK 202

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237
                     V  +     D    A        A+++  S+ ++   L  P ++      
Sbjct: 203 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTK 256

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
           L  + +    S    V         +       R+SG   ++D  V 
Sbjct: 257 LPVDVRSGRLSSNLDV------NFAMTGDTPSLRVSGTLDLNDAQVT 297


>gi|207725382|ref|YP_002255778.1| hypothetical protein RSMK00260 [Ralstonia solanacearum MolK2]
 gi|206590618|emb|CAQ37580.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
          Length = 1262

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/333 (13%), Positives = 101/333 (30%), Gaps = 35/333 (10%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65
           IGLG L  + + G                 E Q +  + + + V    KI + P+   + 
Sbjct: 50  IGLGVLIFLAVFGLLGAVG--GPPLLHHLAETQLSKYLERPVTVG---KIRLNPYTLRLE 104

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
              + I +++  +    I  L + A +  +      + ++ +D P +    +++   N+ 
Sbjct: 105 IDQLHIAERDGKTPFVDIGHLHVNAAWSSIFRRAPVIEELTVDAPRVRIVRTAEQRFNFS 164

Query: 126 -----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                        K   +     +   + +  G I+ +DQ     + +  L + +     
Sbjct: 165 DIVDRLTRPEVPPKPKSNEPARFLFANLRLNNGAIQFVDQPLGAQHTVDGLQIGVPFL-- 222

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
               P  +D     ++A      D     F       A++   SL I+L  L  P  +  
Sbjct: 223 -ASLPADVDIFVQPLLA---ARIDGAPLHFAGKTKPFAQSLESSLNIKLDGLDLPRYL-- 276

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
            G +       I  G  +           +      R+ G   + +  V           
Sbjct: 277 -GYVPGPLPVAIPQGKLTTD-LTIDFQKPKTGNPVLRVHGTAGLDNLEVT--------DA 326

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
             +      + + +  +   L+   +      D
Sbjct: 327 GKAPLVATKQLRATLSDVRPLDNVYHLDALSLD 359



 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/278 (9%), Positives = 85/278 (30%), Gaps = 33/278 (11%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +    ++ +      +     + L      +  L     +  + +D   ++   ++ G  
Sbjct: 315 TAGLDNLEVTDA-GKAPLVATKQLRATLSDVRPLDNVYHLDALSLDGVRVDATRAADGSI 373

Query: 123 NWF---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV--YFLSDL 165
           N+                   +      +V + K+ +    I+  D  +       L DL
Sbjct: 374 NFARLGGKPAPVEAKPTPSTPAAQPKPLDVAVGKLQLANSSIRWRDATTQPAADLVLDDL 433

Query: 166 NLQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKI 221
           +  ++ R L   + L + +     G++  +G+ + D +    ++  +          L+ 
Sbjct: 434 HGDVAVRTLGGPTTLDVGAKLASGGTLNVKGSTSLDKRTGELELKLDAIKLAAVEPYLRQ 493

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSG----------VFSVAGDFSKLLNLELSAKKSR 271
              P      +   G +        ++             ++A        L     +  
Sbjct: 494 AGAPQLQNGALSADGKIALEFGADKFNVRAEPLVATLADLALAPATRNDTALRAKQLRVD 553

Query: 272 LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
           +  NF ++   + ++  +  ++  +    +D  T ++ 
Sbjct: 554 VK-NFDLASRTLALNEVRSDALQLDVLRKQDGSTVLTL 590


>gi|107027703|ref|YP_625214.1| hypothetical protein Bcen_5368 [Burkholderia cenocepacia AU 1054]
 gi|116693585|ref|YP_839118.1| hypothetical protein Bcen2424_5492 [Burkholderia cenocepacia
           HI2424]
 gi|105897077|gb|ABF80241.1| protein of unknown function DUF748 [Burkholderia cenocepacia AU
           1054]
 gi|116651585|gb|ABK12225.1| protein of unknown function DUF748 [Burkholderia cenocepacia
           HI2424]
          Length = 1275

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 98/292 (33%), Gaps = 29/292 (9%)

Query: 3   RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           RR+ IG+     +  L+G F  P  I     R   E+Q +  + +   ++   +I + P+
Sbjct: 26  RRIGIGVLIFLVLFGLLGFFAAPPLI-----RHVAEQQLSKQLDRPATIQ---RIALNPY 77

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             ++    IR+ ++        I  L +R  +  L  G   V ++ +D P  +       
Sbjct: 78  TLNLEADGIRLGERGGQGDFIDIGKLVVRPSWSSLFRGAPIVNEVRLDSPRFHVVRYDAQ 137

Query: 121 VSNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
             N+                      +  I V  GRI   D+  ++ + + +  L I   
Sbjct: 138 RFNFTDLIEKFSSPTPKPDSKPTQFSVSNIQVNDGRIDFDDRLLNEKHVVDNWTLGIP-- 195

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
                           V  +    FD    +        A+++   + ++   L  P +I
Sbjct: 196 ----YIATLASKTDIFVEPKLRARFDGSPISIDGKTKPFAQSRESEIALKFDRLDVPKLI 251

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                +       + SG+ S +      + +       R+SG   +SD  V 
Sbjct: 252 S---YVPAKLPVAVTSGLLS-SNLTVNFV-MSGETPALRVSGTVDLSDAKVT 298



 Score = 40.6 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 79/308 (25%), Gaps = 65/308 (21%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +V   D ++  +          G+ + A  L  L   +   ++ +DQP ++     +GV 
Sbjct: 289 TVDLSDAKVTDRASA-PLFAARGVHIAAAGLEPLRNAMHFDEIRLDQPVVDLSRDKQGVL 347

Query: 123 NWF---------------------------------------------QRKSTMDMIHNV 137
           N                                                  +      ++
Sbjct: 348 NVEKLVAQPAAAPKAAAGKPGASAVAVSGASAASGATVAAASGAKAEGSAAAKAAPPLDL 407

Query: 138 ILEKIHVKGGRIKIID--QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195
            +  + + GG I + D    +     L+ L   +    L   +P    ++  S+   G  
Sbjct: 408 TIRHVAIDGGTINVDDRVPATPTALSLTKLAATLDGFSLQGKTPAKY-TLSTSLSRGGDV 466

Query: 196 NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID-LFGNLFWNEKQPIYSGVFSVA 254
             +   +     A+      A++L      L        L G L          G   +A
Sbjct: 467 KAEGAFNLAAKQADTKLTVAALALPALQPYLGEATRARVLDGTLGATVNAKTDWGKTPLA 526

Query: 255 G---------DFSKLLNLELSAKKSRLS------GNFKISDGNVRISRYKLQSILPNSST 299
                        K+   +  A    L           ++     I+      +  +   
Sbjct: 527 AEVADSTVSLKSLKIAAPDNKAPAIVLPDASAKIAKIDVAARTAEIASVDTSGLALDVKR 586

Query: 300 DEDNKTKV 307
            +D K  +
Sbjct: 587 LKDGKIDL 594


>gi|326402256|ref|YP_004282337.1| hypothetical protein ACMV_01080 [Acidiphilium multivorum AIU301]
 gi|325049117|dbj|BAJ79455.1| hypothetical protein ACMV_01080 [Acidiphilium multivorum AIU301]
          Length = 999

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 89/314 (28%), Gaps = 31/314 (9%)

Query: 15  VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74
           ++   A   P  I     R   ER A+ +VG+ + ++G I + +LP P +  +++ I   
Sbjct: 2   LIGAAALYGPRLISGDYHRGAIERLASGVVGRPVYIEGPITLSLLPDPQLVAENVIIGGP 61

Query: 75  EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134
                      L +     PLL G +R   + +  P++                  +   
Sbjct: 62  HGAQ--VTTAVLKLDLAPGPLLLGRLRATRLALQHPYITLP------WPLPGGAEALAPP 113

Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
             +      +  G  +I                    R  +    +     +  + A GT
Sbjct: 114 PWLGSLHATLHDGTFRI-----------------GPLRLDHANLSIFTGGPQAVISASGT 156

Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI-IIDLFGNLFWNEKQ-PIYSGVFS 252
                  +A  +  +    +    +  +L      +  +   G L  + +   +      
Sbjct: 157 TMLGKTPAAIALRVDDTGSDGPAPMTAELKLGKDALTTLSFHGALGHDSRLEGVIDIAAD 216

Query: 253 VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312
                  L  L+ S+    ++G    +           Q          + +  ++    
Sbjct: 217 KKAVSELLPELQKSSAPLHVTGQLAATGHLAAFENVSAQFGSA----QVEGQGALALVPA 272

Query: 313 NLLNFSENGAESMH 326
            LL  +  G     
Sbjct: 273 PLLRITAKGDGLDL 286


>gi|192361323|ref|YP_001981048.1| AsmA family superfamily [Cellvibrio japonicus Ueda107]
 gi|190687488|gb|ACE85166.1| AsmA family superfamily [Cellvibrio japonicus Ueda107]
          Length = 718

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 55/367 (14%), Positives = 113/367 (30%), Gaps = 49/367 (13%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFESKIEGL 86
               F+   E  A    G  + + G +     P   V   DI +   E      ++++  
Sbjct: 27  SPNQFKPHIEAAAKEQ-GIALHM-GDLGWAFWPSIGVSLADITVAAVETPEKPIAELKNA 84

Query: 87  SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM------------- 133
           S+    +PL  GE +V  + +D   ++  +  +G  NW     +                
Sbjct: 85  SLMLALMPLFRGEFQVDHVAVDGAQIHLAVDKQGKGNWEALSQSSTPESSEKAQVQSQTQ 144

Query: 134 -------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS-- 184
                    N+ +EKI +    +   D+++ Q+  L DLN+ ++          +  S  
Sbjct: 145 SQASEAKPLNLEVEKISLTNSALDYHDEKTGQIINLRDLNIVLTGVNTQGNPFDAQLSWL 204

Query: 185 ----IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
                  +   +  G  +N+ +  K   N    +  + L +     A  I +D    +  
Sbjct: 205 LELVQANTDKLQVKGELNNRVTLDKEFNNLQLDDGQLRLTLTQKSSA-DIALDYQLAVKD 263

Query: 241 NEKQPIYSGVFSVAGDFSK----------LLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
            +K   Y G   +    ++                + K   L    K     V +   +L
Sbjct: 264 LQKDMSYQGKLQLLSLNARQVLAALGTRLDTANSDALKHVALGTAIKGDTKQVALDDLQL 323

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-----LNETDFFEEEEKKNKNDD 345
                   T       V+    + L     G     D      +ET    ++    ++  
Sbjct: 324 TL----DKTRFTGNLAVTDLATSALKLKLTGDSINVDDYLPPPSETPAAAQQAAATEDTP 379

Query: 346 LKKDDIQ 352
           L  + ++
Sbjct: 380 LPLEALR 386


>gi|148259105|ref|YP_001233232.1| hypothetical protein Acry_0084 [Acidiphilium cryptum JF-5]
 gi|146400786|gb|ABQ29313.1| hypothetical protein Acry_0084 [Acidiphilium cryptum JF-5]
          Length = 999

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 89/314 (28%), Gaps = 31/314 (9%)

Query: 15  VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74
           ++   A   P  I     R   ER A+ +VG+ + ++G I + +LP P +  +++ I   
Sbjct: 2   LIGAAALYGPRLISGDYHRGAIERLASGVVGRPVYIEGPITLSLLPDPQLVAENVIIGGP 61

Query: 75  EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134
                      L +     PLL G +R   + +  P++                  +   
Sbjct: 62  HGAQ--VTTAVLKLDLAPGPLLLGRLRATRLALQHPYITLP------WPLPGGAEALAPP 113

Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
             +      +  G  +I                    R  +    +     +  + A GT
Sbjct: 114 PWLGSLHATLHDGTFRI-----------------GPLRLDHANLSIFTGGPQAVISASGT 156

Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI-IIDLFGNLFWNEKQ-PIYSGVFS 252
                  +A  +  +    +    +  +L      +  +   G L  + +   +      
Sbjct: 157 TMLGKTPAAIALRVDDTGSDGPAPMTAELKLGKDALTTLSFHGALGHDSRLEGVIDIAAD 216

Query: 253 VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312
                  L  L+ S+    ++G    +           Q          + +  ++    
Sbjct: 217 KKAVSELLPELQKSSAPLHVTGQLAATGHLAAFENVSAQFGSA----QVEGQGALALVPA 272

Query: 313 NLLNFSENGAESMH 326
            LL  +  G     
Sbjct: 273 PLLRITAKGDGLDL 286


>gi|209547987|ref|YP_002279904.1| AsmA family protein [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209533743|gb|ACI53678.1| AsmA family protein [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 630

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/340 (12%), Positives = 93/340 (27%), Gaps = 22/340 (6%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66
           + L    ++ +      P  I     R   E   +   G    +KG   +   P P +  
Sbjct: 29  VFLLIALALFVALRVAAPYLITTGFVRSGIEDALSKWTGYHAEIKGSPVLEFWPTPRITL 88

Query: 67  KDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124
             I I Q           I+ LS     +  L G     + ++ +P+L       G+ +W
Sbjct: 89  NQITIRQPRESGDKLLGSIDSLSADFSLIDALRGRTSFHEFHLVRPNLALTRDENGLIDW 148

Query: 125 F---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
                                +D   +  +  + V+ G + + D ++ + Y    +   I
Sbjct: 149 SYAGLLARAISGVRTENGAEVLDPDLDAEIGAVTVEDGALAVTDIKTAKTYRFDSVTADI 208

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
           +   L+      + +       +           F         +   +L    F     
Sbjct: 209 AWPRLSGAISAVVIARINGEDLKVDFASRQPLLVFAGRNAETRTSLTSNLLTAHFQGIAN 268

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
           I   L  +       P    + + +G     +    SA    L  +   S   +R +   
Sbjct: 269 IASLLALSGNITASIPDMPALLTWSGKSIPGIATLKSA---SLESDIMSSGNGLRFNNLS 325

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
           L     +++   D        +   +  +    +      
Sbjct: 326 LSLNEASATGVMD--LLTQPGKRPKIGGTLAFDQMNLKPF 363


>gi|110636561|ref|YP_676768.1| outer membrane integrity protein [Cytophaga hutchinsonii ATCC
           33406]
 gi|110279242|gb|ABG57428.1| membrane spanning protein, required for outer membrane integrity
           [Cytophaga hutchinsonii ATCC 33406]
          Length = 1038

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 47/355 (13%), Positives = 101/355 (28%), Gaps = 29/355 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGG-IKIHI-- 58
           +++ L   G    V+L+    +P        +   + Q    +  ++        + +  
Sbjct: 17  MKKFLKISGISIGVLLLAMLILPFLF-KDKIKGIIDEQIKKNINGQVWYNAESFSLSLFS 75

Query: 59  -LPFPSVFFKDIRIDQK---EDGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLN 113
             P  +V   ++ +        G      +  S+  + + ++SG +I+V  +++DQP + 
Sbjct: 76  HFPNLTVSIDELGLVSNVTEFKGDTLFAAKQFSLTIDIMSVISGDQIKVKGVFLDQPKIV 135

Query: 114 FYLSSKGVSNW---------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
                 G  +W                    N+ +EK  +K G I   DQ       L  
Sbjct: 136 TIFDKSGKMSWDITYPDTTQAPAAPEEPSTLNLSIEKWEIKDGTIIYDDQTMPMYAELKH 195

Query: 165 LNLQISARFLNIISPLS--IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
           L+ + S   +  +  L     S    V  +GT   D +        N           + 
Sbjct: 196 LDHKGSGDIMADVYDLKTYTKSTNVLVEYDGTKYLDGQTVTADAAMNIDLAKSVYKF-LD 254

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA------KKSRLSGNF 276
                        G +            ++      K L   L A      +K +  G  
Sbjct: 255 NEFAINDFKFGFNGAIEMPTDDIKMDITYNAKETDFKNLLSLLPAVYNKDFEKVKTEGII 314

Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVS--QDEENLLNFSENGAESMHDLN 329
                   +           +   +D   +     D    +N   +  +    ++
Sbjct: 315 GFDGYVKGVYNETTMPGFGLNMLIKDGYFQYPDLPDAVKNINLDLHVDDKDGVID 369


>gi|322421307|ref|YP_004200530.1| hypothetical protein GM18_3828 [Geobacter sp. M18]
 gi|320127694|gb|ADW15254.1| protein of unknown function DUF748 [Geobacter sp. M18]
          Length = 1210

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 97/322 (30%), Gaps = 38/322 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-F 61
           + + IGLG + +++L     +P+ +     +           G+K  +     + I P  
Sbjct: 6   KYLFIGLGVIAALLLFTVAILPVIV-----KNKAVTALEEATGRKAQIG---SVSINPLT 57

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             V   D  I   E G        L        +    + + ++ +D P  N   ++   
Sbjct: 58  LHVKVDDFAIAG-EAGPPLVAFRELHASLAPASIFKRALILSEITLDAPTFNLVRTAPNR 116

Query: 122 SNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLNLQI-- 169
            N+          +KS         L  I +K G I+  D+     + + + +LN+ I  
Sbjct: 117 FNFSDIIDRQSKEKKSEKGTPLQFSLNNISIKNGSIEFDDRMVGGGRKHSVRELNIAIPF 176

Query: 170 ---SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT-------ANFPAKNKAISL 219
              S           I ++         G       + + +        N P       +
Sbjct: 177 ISNSPYLAERYIDPRITALVNGASFNFAGKLKPMSKSLETSVHVGLKQLNLPQLVAYYPV 236

Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQ---PIYSGVFSVAGDFSKLLNLELSAKKSRLS--- 273
           K      +  + +D+      +  +    +  G+  +      L   +  A+   L    
Sbjct: 237 KPPADLTSGKLTVDMDIGYRISADKEPELVLKGMSRLDDVAVDLPGGKPLARLPGLEVKA 296

Query: 274 GNFKISDGNVRISRYKLQSILP 295
              ++ + N++        +  
Sbjct: 297 AKLEVLNKNLQFDSIAATGLEL 318


>gi|218462504|ref|ZP_03502595.1| hypothetical conserved membrane protein [Rhizobium etli Kim 5]
          Length = 340

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 91/313 (29%), Gaps = 20/313 (6%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66
           + L     + +      P  I     R   E   +   G +  +KG   +   P P +  
Sbjct: 29  VLLLIALGLFVALRVAAPYLITTGFVRSGIEDALSKWTGYQAEIKGDPVLEFWPTPRIIL 88

Query: 67  KDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124
            ++ I Q           IE LS     +  L G     + ++ +P+L      KG+ +W
Sbjct: 89  NEVTIRQPRESGDKLLGSIESLSADFSLIDALRGRTSFHEFHLVRPNLALTRDEKGLIDW 148

Query: 125 F---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
                                +D   +  +  + V+ G + + D  S + Y    +   I
Sbjct: 149 SYAGLLARAINGVRYENGAEVLDPALDAEIGAVTVEDGTLAVTDIISAKTYRFDSITADI 208

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
           +   L+      + +       +          AF   +     +   +L    F     
Sbjct: 209 AWPRLSGAISAVVIARIDGEDLKVDFASRQPLLAFAGKSAEMRTSLTSNLLTARFQGIAS 268

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
           I      +       P    + + +G     +    SA    L  +   S   +R +   
Sbjct: 269 IASLSALSGNIAASIPDVPALLTWSGRSIPGIGTLKSA---SLESDIVSSGSGLRFNDLS 325

Query: 290 LQSILPNSSTDED 302
           L     +++   D
Sbjct: 326 LSLNEASATGVMD 338


>gi|86356369|ref|YP_468261.1| hypothetical protein RHE_CH00718 [Rhizobium etli CFN 42]
 gi|86280471|gb|ABC89534.1| hypothetical conserved membrane protein [Rhizobium etli CFN 42]
          Length = 630

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 46/328 (14%), Positives = 92/328 (28%), Gaps = 26/328 (7%)

Query: 21  FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK--EDGS 78
              P  I     R   E   +   G    +KG   +   P P +    + I Q       
Sbjct: 43  VAAPYLITTGFVRSGIEDALSKWTGYHAEIKGNPVLEFWPTPRITLNQVTIRQPRESGDK 102

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------------- 125
               IE LS     +  L G     + ++ +P+L       G+ +W              
Sbjct: 103 LLGSIESLSADFSLIDALRGRTSFHEFHLLRPNLALTRDENGLIDWSYTGLLAHAISGVR 162

Query: 126 --QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                  +D   +  +  + V+ G + + D  S + Y    +   I    L+      + 
Sbjct: 163 YENGAEVLDPALDAEIGAVTVEDGTLAVTDVRSAKTYNFDSVTADIGWPRLSGAISAVVI 222

Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKIQLFPLAYPIIID-LFGNLFWN 241
           +    V  +          AF   +     +   + L  +   +A    +  L GN+   
Sbjct: 223 ARINGVDLKVDFASRQPLLAFAGKSAETRTSLTSNLLTARFQGIASIASLSALSGNIAV- 281

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
              P      + +G     +    SA    L  +   S   +R +   L     +++   
Sbjct: 282 -SIPDVPAFLTWSGRSLPGVGTLKSA---SLESDIMSSGSGLRFNDLSLSLNEASATGVM 337

Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLN 329
           D     +      +  +    +      
Sbjct: 338 D--LSTTTGRRPKIGGTLAFDQMNLKPF 363


>gi|254475416|ref|ZP_05088802.1| AsmA [Ruegeria sp. R11]
 gi|214029659|gb|EEB70494.1| AsmA [Ruegeria sp. R11]
          Length = 650

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 81/312 (25%), Gaps = 24/312 (7%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIEGLS 87
               +    Q     G+ +   G +   + P   V    + +              E L+
Sbjct: 28  EKLAKLAADQIEAQTGRTVTFGGRVGYTLWPTLGVKADRVALSNASWAGPEPMLTAERLT 87

Query: 88  MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW------------FQRKSTMDMIH 135
           +      L++G++RV ++    P LN      G  NW                S      
Sbjct: 88  IGIAAADLIAGKVRVTELSAVLPQLNLSTREDGTGNWVLERPTAADVQTTASSSGAFDSL 147

Query: 136 NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195
            V +E +++ G  ++      +    +  +++ ++         + +        A    
Sbjct: 148 PVSIEALNLTGATLRYA-PFGEAPVEMRQVDVALAWPDPTGTVDMDVTLRP----AGAPV 202

Query: 196 NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255
               +   F         +   S+  +   L +    +L G               ++A 
Sbjct: 203 RVVGEIGTFAAFLAGEVSSIGASITAKDTELRFDGRAELTGAASGRLTGRSTDLGATLAA 262

Query: 256 DFSKLLNLELSAKKSRLSGNFKI-SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314
                        +  +  +    SDG + +    L +              ++   +  
Sbjct: 263 FGVAPGAELPKVGEWLIGADATYTSDGRLALRDLSLSA----DENRITGGADITLAGKPT 318

Query: 315 LNFSENGAESMH 326
           +    +      
Sbjct: 319 ITAQLSAGALDL 330


>gi|170737139|ref|YP_001778399.1| hypothetical protein Bcenmc03_4779 [Burkholderia cenocepacia MC0-3]
 gi|169819327|gb|ACA93909.1| protein of unknown function DUF748 [Burkholderia cenocepacia MC0-3]
          Length = 1277

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 50/340 (14%), Positives = 102/340 (30%), Gaps = 47/340 (13%)

Query: 3   RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           RR+ IG+     +  L+G F  P  I     R   E+Q +  + +   ++   +I + P+
Sbjct: 26  RRIGIGVLIFLVLFGLLGFFAAPPLI-----RHVAEQQLSKQLDRPATIQ---RIALNPY 77

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             ++    I + ++        I  L +R  +  L  G   V ++ +D P  +       
Sbjct: 78  TLNLEADGIHLGERGGQGDFIDIGKLVVRPSWSSLFRGAPIVNEVRLDSPRFHVVRYDAQ 137

Query: 121 VSNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
             N+                      +  I V  GRI   D+  ++ + + +  L I   
Sbjct: 138 RFNFTDLIEKFSSPTPKPDSKPTQFSVSNIQVNDGRIDFDDRLLNEKHVVDNWTLGIP-- 195

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
                           V  +    FD    +        A+++   + ++   L  P +I
Sbjct: 196 ----YIATLASKTDIFVEPKLRARFDGSPISIDGKTKPFAQSRESEIALKFDRLDVPKLI 251

Query: 233 D--------------LFGNLFWNEKQPIYSGVFSVAG-DFSKLLNLELSAKKSRLSGN-- 275
                          L  NL  N      +    V+G        +   A     +    
Sbjct: 252 SYVPAKLPVAVTSGLLSSNLTVNFVMSGETPALRVSGTVDLNDAKVTDRASAPLFAARGV 311

Query: 276 ------FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
                  +     +     +L   + + S D+     V +
Sbjct: 312 HVAAAGLEPLRNAMHFDEIRLDQPVIDLSRDKQGVLNVEK 351



 Score = 42.2 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 38/317 (11%), Positives = 82/317 (25%), Gaps = 67/317 (21%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +V   D ++  +          G+ + A  L  L   +   ++ +DQP ++     +GV 
Sbjct: 289 TVDLNDAKVTDRASA-PLFAARGVHVAAAGLEPLRNAMHFDEIRLDQPVIDLSRDKQGVL 347

Query: 123 NWFQRKSTM-----------------------------------------------DMIH 135
           N  +  +                                                     
Sbjct: 348 NVEKLVAQPAAAPKAEAGKPAASAAAVSAATASGASSGAVAAASGAKAEGSAAAREAPPL 407

Query: 136 NVILEKIHVKGGRIKIID--QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193
           ++ +  + + GG I + D    +     L+ L   +    L   +P    ++  S+   G
Sbjct: 408 DLTIRHVAIDGGTINVDDRVPATPTALSLTKLAATLDGFTLQGKTPAKY-TLSTSLSRGG 466

Query: 194 TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID-LFGNLFWNEKQPIYSGVFS 252
               +   +     A+      A++L      L        L G L          G   
Sbjct: 467 DVTAEGAFNLAAKQADTKLTVAALALPALQPYLGEATRARVLDGTLGATVNAKTDWGKTP 526

Query: 253 VAG---------DFSKLLNLELSAKKSRLS------GNFKISDGNVRISRYKLQSILPNS 297
           +A             K+   +  A    L           ++     I+      +  + 
Sbjct: 527 LAAEVADSTVSLKSLKIAAPDNKAPAIALPDASAKIAKIDVAARTAEIASVDATGLALDV 586

Query: 298 STDEDNKTKVSQDEENL 314
              +D K  ++   E  
Sbjct: 587 KRLKDGKIDLAALAEPA 603


>gi|258591568|emb|CBE67869.1| exported protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 669

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 45/337 (13%), Positives = 97/337 (28%), Gaps = 42/337 (12%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KEDGSFESKIEGL 86
           D   +R     + + ++ + +   G +++H+LP P V  +++ I             E L
Sbjct: 31  DQERYRGILIGRVSQLLNRNVTATG-LRVHLLPSPEVTIRNVVIADRAPWSEPFVDAEQL 89

Query: 87  SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ-------------------- 126
            +  + LPLL G+I++ ++ ID+P +       G  N                       
Sbjct: 90  HVSLKLLPLLKGDIQIGNIRIDRPRIRLAKGPDG-WNLDDLIRPAARGATVEPHHTEGTR 148

Query: 127 RKSTMDMIHNVILEKIHVKGGRIKIID---QESDQVYFLSDLNLQISARFLNIISPLSID 183
                  +  ++   + ++ G + + +             D+N+ I A           D
Sbjct: 149 AARGQPALPVLLAGTLAIRHGALVVDNPLHPYGPVTLEFQDINMDIPATRSPHPLRFQAD 208

Query: 184 SI-----KGSVIAEGTG-NFDNKRSAFKITA------NFPAKNKAISLKIQLFPLAYPII 231
                   GS    G+    +  R   ++             +            A  + 
Sbjct: 209 GQLPGETSGSFELTGSVQRAEGNRIPIEVELRVRGLDAAQLASAIGLSGGAAAAFAGTLD 268

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
           ++      W              G        +    K+RL    +   G + +S   L 
Sbjct: 269 VEGKAVGEWPRLDLDTDVDLQRLGVTLAKEMGKAPGDKARLHAKGRWEGGQLDLSDINL- 327

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328
                       +  ++  +   L F  N  E   + 
Sbjct: 328 ---LWKGQTIAGRLHLATQQSPRLQFWLNTPELSLEP 361


>gi|300704763|ref|YP_003746366.1| hypothetical protein RCFBP_20585 [Ralstonia solanacearum CFBP2957]
 gi|299072427|emb|CBJ43772.1| Conserved protein of unknown function [Ralstonia solanacearum
           CFBP2957]
          Length = 1262

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 44/333 (13%), Positives = 101/333 (30%), Gaps = 35/333 (10%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65
           IGLG L  + + G                 E Q +  + + + V    KI + P+   + 
Sbjct: 50  IGLGVLIFLAVFGLLGAVG--GPPLLHHLAETQLSKYLERPVTVG---KIRLNPYTLRLE 104

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
              + I +++  +    +  L + A +  +      + ++ +D P +    +++   N+ 
Sbjct: 105 IDQLHIAERDGKTPFVDVGHLHVNAAWSSIFRRAPVIEELTVDAPRVRIVRTAEQRFNFS 164

Query: 126 -----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                        K   +     +   + +  G I+ +DQ     + +  L + +     
Sbjct: 165 DIVDRLTQPEIPPKPKSNEPARFLFANLRLNDGAIQFVDQPLGAQHTVDGLQIGVPFL-- 222

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
               P  +D     ++A      D     F       A++   SL I+L  L  P  +  
Sbjct: 223 -ASLPADVDIFVQPLLA---ARIDGAPLRFAGKTKPFAQSLESSLNIKLDGLDLPRYL-- 276

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
            G +       I  G  +           +      R+ G   + +  V           
Sbjct: 277 -GYVPGPLPVAIPQGKLTTD-LTIDFQKPKTGNPVLRVHGTAGLDNLEVT--------DA 326

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
             +      + + +  +   L+   +      D
Sbjct: 327 GKAPLVATKQLRATLSDVRPLDNVYHLDTLSLD 359



 Score = 58.0 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/277 (11%), Positives = 84/277 (30%), Gaps = 31/277 (11%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +    ++ +      +     + L      +  L     +  + +D   ++   ++ G  
Sbjct: 315 TAGLDNLEVTDA-GKAPLVATKQLRATLSDVRPLDNVYHLDTLSLDGLRVDAARAADGSI 373

Query: 123 NWF---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV--YFLSDL 165
           N+                   +      +V + K+ +    I+  D  +       L DL
Sbjct: 374 NFARLGGKPAPAEAKPAPSTPAAQPKPLDVAVGKLQLANSSIRWRDATTQPAADLVLDDL 433

Query: 166 NLQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKI 221
           +  I+ R L   + L + +     G++  +G+ + D      ++  +          L+ 
Sbjct: 434 HGDIAVRTLGGPTTLDVGAKLASGGTLNVKGSTSLDKHTGELELKLDAIKLAAVEPYLRQ 493

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL--------ELSAKKSRLS 273
              P      +   G +        ++            L L         L AK+ R+ 
Sbjct: 494 AGAPQLQNGALSADGKIALEFGADKFNVRAEPLVATLTDLALAPTTRNDTALRAKQVRVD 553

Query: 274 GN-FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
              F ++   + ++     ++  +    +D  T ++ 
Sbjct: 554 VKSFDLAARTLALNEVHSDALQLDVLRKQDGSTVLTL 590


>gi|293607603|ref|ZP_06689937.1| hypothetical protein HMPREF0004_5513 [Achromobacter piechaudii ATCC
           43553]
 gi|292814036|gb|EFF73183.1| hypothetical protein HMPREF0004_5513 [Achromobacter piechaudii ATCC
           43553]
          Length = 832

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/326 (10%), Positives = 87/326 (26%), Gaps = 41/326 (12%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82
             L  D   ++   E        + + + G I++ + P   +  + + + +       + 
Sbjct: 26  FLLTFDPNAYKYKLEELVQERYHRTLTIDGEIELSLFPRIGLSVQGVSLSEPNSPETFAS 85

Query: 83  IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--------------- 127
           IE   +     PLLS    V  + I            G  N+                  
Sbjct: 86  IESTRLAVAVWPLLSNSFVVDHVAISGLKARVVRGKDGQFNFSNLVGGASTTTAAPASPA 145

Query: 128 ------------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
                                      + +  + +K G +++ D  S     ++ +N   
Sbjct: 146 EALVGAAQTAAQAITSGTLPASRNNMQIDIAGLDLKDGEVQLQDAISGMAVAVTKINANT 205

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-PLAY 228
                N    + + +           N   +       +      + + L++    P A 
Sbjct: 206 GRVTFNQPFDVRLTARVEGGNPRVDANLTGQALLTLDPSAKRYAAQKLDLRMDGKLPGAE 265

Query: 229 PIIIDLFGNLFWNEKQPIYS-------GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281
              + + GNL +N ++               +    ++   +E S    +LS +   S  
Sbjct: 266 AKSLAVRGNLAFNGQKSALDVAGLEVVFQGDITDPAARATGVEASVAMPKLSIDPHKSQL 325

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKV 307
            +     + +    +   +       
Sbjct: 326 QIEKLAVRAKGGSADGPFEFAVDAPA 351


>gi|296534439|ref|ZP_06896878.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
 gi|296265234|gb|EFH11420.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
          Length = 573

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/314 (13%), Positives = 86/314 (27%), Gaps = 33/314 (10%)

Query: 15  VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74
           +VL G +  P   DW + R+     A   +G+++ + G +++ +LP P +    + I   
Sbjct: 1   MVLAGLWYGPRLTDWNEHRDRLAILAAGRLGQRVTLAGPVQLTLLPQPMLEAGGVTIGGP 60

Query: 75  EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134
           ED     +   L +R +   LL   +   ++ +    +              R       
Sbjct: 61  EDDI-SIRARALRLRLDLPALLRLRLEPREVALVGAEIRLPWPPVPAGGQPFRPPPWLTG 119

Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
               ++   V  G++ +                        + + L+  S   ++  +G 
Sbjct: 120 LQGRIQDSRVTIGQLVL----------------------ERVEADLAAASASEALRIQGR 157

Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254
             +      F  T      +    L + +                    +  + G     
Sbjct: 158 FRWRQTDLDFDTTLGRAGWDGIAPLALTVSGARASAS-----ASGVLLPEGGFEGTLQGG 212

Query: 255 GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314
           G     L L   A   RL G    S   +      L      +         +       
Sbjct: 213 GSDLSAL-LPAPAGSFRLRGRLSASADLLTADELALDLGGSPA----RGVATLRLAPMPR 267

Query: 315 LNFSENGAESMHDL 328
           L+ +        D 
Sbjct: 268 LDLALVTGRVELDP 281


>gi|221208524|ref|ZP_03581526.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
 gi|221171712|gb|EEE04157.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
          Length = 337

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 94/332 (28%), Gaps = 38/332 (11%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65
           IGLG L  +VL G      F      R   E+Q +  + +   ++   +I + P+  ++ 
Sbjct: 28  IGLGILIFLVLFGLLG--FFAAPPLIRHIAEQQLSKQLDRPATIR---RIALNPYTLNLE 82

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
              I + +         I  L +R  +  L  G   V ++ +D P            N+ 
Sbjct: 83  ADSIHVGEHGGQGDFIDIAKLVVRPSWTSLFRGAPIVNEIRLDSPRFRIVRYDAQRFNFT 142

Query: 126 Q-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                               +  I +  GRI   D+  ++ + + +  L +         
Sbjct: 143 DLIEKFSTPSKPDSKPTLFSVSNIQINNGRIDFDDRLLNEKHVVDEWTLGVP------YI 196

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID---LF 235
                     V  +    FD    A        A+++   + ++   L  P +I      
Sbjct: 197 ATLPSKTDIFVEPKLRMRFDGSPIAIDGKTKPFAQSRESEIALKFDRLDVPKLISYVPAK 256

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
             +             +          +       R+SG   ++D  V            
Sbjct: 257 LPVAVTSGLLSSDLSVNFV--------MSGDTPALRVSGTVDLTDAKVT--------GPA 300

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
           +          V+      L  + +  E   D
Sbjct: 301 SEPLFAARGVHVAAAGLEPLRNAMHFDEIRLD 332


>gi|300115136|ref|YP_003761711.1| AsmA family protein [Nitrosococcus watsonii C-113]
 gi|299541073|gb|ADJ29390.1| AsmA family protein [Nitrosococcus watsonii C-113]
          Length = 667

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 61/366 (16%), Positives = 120/366 (32%), Gaps = 32/366 (8%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHIL-PFPSVFFKDIRIDQKEDG--SFESKIE 84
           D    ++          G+++ + G +K+ +L   PS+  K IR++  E       + I 
Sbjct: 28  DENRVKKWASSYVEQAYGRELVIAGDLKLDLLTLQPSITIKGIRLENAEWADKPNMATIS 87

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIH- 143
            +  + E LPL+ G+I + D  I    +         +                +EKI  
Sbjct: 88  KVFFQFELLPLILGKINLLDGEIRDGQVFLAEQKNKTNWNTFLPQEKKPPGYFAVEKIRS 147

Query: 144 --VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201
             +    +   ++   + + L   N+++   +                     G  D   
Sbjct: 148 FKLSNFTVAYHNKAKKETHTLRMENIRLRDFYSPQR------------KVSFHGRIDTIP 195

Query: 202 SAFKI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS 258
            +F+I    +N    +K + L   +  +A     D+ G+    + +    G        +
Sbjct: 196 VSFQIDQKASNEKKVDKLLVLTGHIDTIALYATGDISGHPKRVKGKVRVKGTGETLSRLA 255

Query: 259 KLLNLELS---AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315
           KL  LE     A     + +  I D  + +++  +             K K+  +E+  L
Sbjct: 256 KLAGLETRTFHAYDGSGTIDANIEDRWLNLTQLTINYGQS----QMRGKLKIDLNEKRTL 311

Query: 316 NFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV-NKKEEKDNSHDKENQENFS 374
                G      L   DF    +K       +  DI      K+ EK    D +  E F 
Sbjct: 312 ---VRGNLLFPVLASPDFRPVAKKGAAELKEEVTDIDVKAQEKQSEKKKLFDDDPIEPFI 368

Query: 375 GDKMIL 380
             ++ L
Sbjct: 369 PARLEL 374


>gi|167818381|ref|ZP_02450061.1| hypothetical protein Bpse9_24811 [Burkholderia pseudomallei 91]
          Length = 302

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 86/287 (29%), Gaps = 27/287 (9%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66
           G+G L  +V  G      F      R   E+Q +  + +   +    +I   P+   +  
Sbjct: 28  GVGALIVLVAFGLLG--FFAAPPLIRHIAEQQLSQQLERPATIA---RIAFNPYTLRLEA 82

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125
             +R+ ++        I  L +RA +  L      + ++ +DQP            N+  
Sbjct: 83  DGVRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTD 142

Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                               +  I V  GRI+  D+  +  + +    + I         
Sbjct: 143 LVDKFSRPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSK 202

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237
                     V  +     D    A        A+++  S+ ++   L  P ++      
Sbjct: 203 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTK 256

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
           L  + +    S    V         +       R+SG   ++D  V 
Sbjct: 257 LPVDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297


>gi|300692126|ref|YP_003753121.1| hypothetical protein RPSI07_2488 [Ralstonia solanacearum PSI07]
 gi|299079186|emb|CBJ51854.1| Conserved protein of unknown function [Ralstonia solanacearum
           PSI07]
          Length = 1264

 Score =  103 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 48/345 (13%), Positives = 106/345 (30%), Gaps = 38/345 (11%)

Query: 3   RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           RR+ +G+     V  L+GA   P            E Q +  + + + V    KI + P+
Sbjct: 48  RRIGLGVLIFLVVFGLLGAVGGPPL-----LHHLAETQLSKYLERPVTVG---KIRLNPY 99

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I +++  +    I  L + A +  +      + ++ +D P +    +++ 
Sbjct: 100 TLRLEIDQLHIAERDGKTPFVDIGHLHVNAAWSSIFRRAPVIEELTVDAPRVRIVRTAEQ 159

Query: 121 VSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
             N+              K   +     +   + +  G I+ +DQ     + +  L + +
Sbjct: 160 RFNFSDIVDKLTQPEIPPKPKSNEPARFVFANLQLNNGAIQFVDQPLGAQHTVDGLRIGV 219

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
                    P  +D     ++A      D     F       A++   SL I+L  L  P
Sbjct: 220 PFL---ASLPADVDIFVQPLLA---ARIDGAPLYFAGKTKPFAQSLESSLNIRLDGLDLP 273

Query: 230 IIID-----LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
             +      L   +   +     +  F      + +L +  +A    L          V 
Sbjct: 274 RYLGYVPGPLPVAVPQGKLTTDLTIDFQKPNIGNPVLRVHGTAGLDSLEVTDAKKAPLVA 333

Query: 285 ISRYKLQSI---LPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
             + +         ++    D    +S D   +            
Sbjct: 334 AKQLRATLSDVRPLDNVYHLD---TLSLDGVRVDAVRAPDGSINF 375



 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/277 (9%), Positives = 82/277 (29%), Gaps = 31/277 (11%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +     + +   +        + L      +  L     +  + +D   ++   +  G  
Sbjct: 315 TAGLDSLEVTDAKKA-PLVAAKQLRATLSDVRPLDNVYHLDTLSLDGVRVDAVRAPDGSI 373

Query: 123 NWFQ---------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV--YFLSDL 165
           N+ Q                        +V + K+ +    I   D  +       L DL
Sbjct: 374 NFAQLGGKPAQTEAKPAPSAPVAQPKPLDVAVGKLQLANSSIHWRDATTQPAADLVLDDL 433

Query: 166 NLQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKI 221
           +  ++ R L   + L + +     G++  +G+ + + +    ++  +          L+ 
Sbjct: 434 HGDVAVRTLGGPTTLDVGAKLASGGTLNIKGSTSLEKRTGELELKLDAIKLTGVEPYLRQ 493

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL------ELSAKKSRLSGN 275
              P      +   G +        ++            L L      + + +  +L  +
Sbjct: 494 AGAPQLQNGALSADGKIALEFGADKFNVRAEPLVATLADLALAPATRNDTALRAKQLRAD 553

Query: 276 ---FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
              F ++   + ++  +   +  +    +D  T ++ 
Sbjct: 554 IKSFDLAARTLALNEVRGDGLQLDVLRKQDGSTVLTL 590


>gi|17545615|ref|NP_519017.1| transmembrane protein [Ralstonia solanacearum GMI1000]
 gi|17427908|emb|CAD14598.1| putative transmembrane protein [Ralstonia solanacearum GMI1000]
          Length = 1261

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 95/295 (32%), Gaps = 31/295 (10%)

Query: 3   RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           RR+ +G+    +V  L+GA   P            E Q +  + + + V    KI + P+
Sbjct: 48  RRIGLGVLIFLAVFGLLGAVGGPPL-----LHHLAETQLSKYLERPVTVG---KIRLNPY 99

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I +++  +    I  L + A +  +      + ++ +D P +    +++ 
Sbjct: 100 TLRLEIDQLHIAERDGKTPFIDIGHLHVNAAWSSVFRRAPVIEELKVDAPRVRIVRTAEQ 159

Query: 121 VSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
             N+              K   +     +   + +  G I+ +DQ     + +  L + +
Sbjct: 160 RFNFSDIVDKLTQPEVPPKPKSNEPARFVFANLQLNNGAIQFVDQPLGAQHTVDGLQIGV 219

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
                    P  +D     ++A      D     F       A++   SL I+L  L  P
Sbjct: 220 PFL---ASLPADVDIFVQPLLA---ARIDGAPLHFAGKTKPFAQSLESSLNIKLDGLELP 273

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
             +   G +       +  G  +                  R+ G   +    V 
Sbjct: 274 RYL---GYVPGPLPVAVPQGKLTTD-LTIDFQKPRTGNPVLRVHGTAGLDGLEVT 324



 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/284 (9%), Positives = 81/284 (28%), Gaps = 34/284 (11%)

Query: 59  LPFPSVF----FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            P   V        + +   +        + L      +  L     +  + +D   ++ 
Sbjct: 307 NPVLRVHGTAGLDGLEVTDTKKA-PLVAAKQLRATLSDVRPLDNVYHLDMLSLDGVRVDA 365

Query: 115 YLSSKGVSNWFQR--------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
             +  G  N+ Q                +      +V + K+ +    +   D  +    
Sbjct: 366 VRAPDGSINFAQLGGKPAPEAKPAAPAPAAQPKPLDVAVGKLQLANSSVHWRDATTQPAA 425

Query: 161 FLSDLNLQISARFLNIISPLSID-----SIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215
            L   +L   A    +  P ++D     +  G++  +G+ + + +    ++         
Sbjct: 426 DLVLDDLHGDAAVRTLGGPTTLDVGAKLASGGTLNVKGSTSLEKRTGELELKLEALKLAG 485

Query: 216 AIS-LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL------ELSAK 268
               L+    P      +   G +        ++            L L      + + +
Sbjct: 486 IGPYLRQAGAPQLQNGALSADGKIALEFGADKFNVHAEPLVATLADLALAPATRNDTALR 545

Query: 269 KSRLSGN---FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
             +L  +   F ++   + ++  +   +  +    +D  T ++ 
Sbjct: 546 AKQLRADIKSFDLAARTLALNEVRADGLQLDVLRKQDGSTVLTL 589


>gi|303247854|ref|ZP_07334122.1| AsmA family protein [Desulfovibrio fructosovorans JJ]
 gi|302490755|gb|EFL50656.1| AsmA family protein [Desulfovibrio fructosovorans JJ]
          Length = 1257

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 33/281 (11%), Positives = 83/281 (29%), Gaps = 18/281 (6%)

Query: 18  VGAFTVPL----FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73
           +  F +PL     I     +   E+  +  +G+++ + G + I  +P+  +    + +  
Sbjct: 19  LAVFVLPLAARELIGAARLKAITEQTLSDALGRRVTITGDVSILFVPWFGLSMGPVAVAD 78

Query: 74  KEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM 131
                 +       + +    LPLL   +    + +    L     + G +NW    +  
Sbjct: 79  APGFGDAPMLTARRVELTIRVLPLLRRVVSPGSVRVRDLTLALRRDTSGRANWDDLTAPQ 138

Query: 132 DMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS---ARFLNIISPL 180
                             + ++   +   D  + +   ++  NL+         +I    
Sbjct: 139 QTAAAEAPGWEVAPEPRDVRLENATVTYDDAVTGRTLSVTKANLKTGRSQPFDFSISFLA 198

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
                 G +    +G      +  ++          +++   L P      + +   L  
Sbjct: 199 KGFMAGGQLECHASGQAGLNAATGELRLGKTLVETILTVDHPLVP-GGATPVRVASRLTA 257

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281
                  +   +          L  SA  S L G+ K++  
Sbjct: 258 TYAPETGTLAVTDLDARLPEAILTGSATLSALPGDAKLATR 298


>gi|222054354|ref|YP_002536716.1| protein of unknown function DUF748 [Geobacter sp. FRC-32]
 gi|221563643|gb|ACM19615.1| protein of unknown function DUF748 [Geobacter sp. FRC-32]
          Length = 1195

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 89/307 (28%), Gaps = 24/307 (7%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPS 63
           +   L    +           F+     R   E++   + G+ +A++    I I P    
Sbjct: 3   LWKKLAIAAAAFFTLLVLFVAFVLPGIVRSQAEKKVGALTGRTLAIR---HISINPLTMR 59

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
           V    +++ +             S R     +      V  +++  P++    +     N
Sbjct: 60  VKVDGLQMQEPGGKITFVSFSSASARLSPASIWRRAPIVTGIHVISPYVRIVRTGANRYN 119

Query: 124 WFQRKST-------MDMIHNVILEKIHVKGGRIKIIDQESD--QVYFLSDLNLQIS---- 170
           +                     L  I V GG I   D+ +   +++ +  +++ +     
Sbjct: 120 FSDIPERMPKSEKKSSSPTLFSLNNITVTGGSINFDDRAARTPKLHTVRRMHIAVPFISN 179

Query: 171 -ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
               ++        +       + TG     +   +   +    +  I       P+  P
Sbjct: 180 IPYLVDQYIQPRFAAEVNGASLDLTGRLKPFQKGMETLLDVNLTDLDIPYYAAYLPVRLP 239

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
           + I         +     +  + V  D   ++ +   A   RL+   K     +   R+ 
Sbjct: 240 MAI------KSGKFSSKIAISYRVTPDKKPVIAITGDAAVVRLAMAEKSEGELLSFDRFA 293

Query: 290 LQSILPN 296
           ++    +
Sbjct: 294 IKINQAD 300


>gi|163867834|ref|YP_001609038.1| hypothetical protein Btr_0603 [Bartonella tribocorum CIP 105476]
 gi|161017485|emb|CAK01043.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
          Length = 626

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 47/382 (12%), Positives = 115/382 (30%), Gaps = 60/382 (15%)

Query: 1   MLRRVLIGLGFLFSVVL----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           M  R++  L  +F  ++    VG F +P  +     R    ++ +   G  + ++   ++
Sbjct: 1   MRIRIIKFLSGIFITIIFLFGVGIFVLPYLVSTDMIRVRLAQELSAWTGYNVQLRDPPRL 60

Query: 57  HILPFPSVFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           ++ P+P      + +  K +D +   + E + +    + LL G +   +  I +P     
Sbjct: 61  NLFPYPKALLSGVTLSSKIDDVAPLMEAESIEVDLSVVDLLWGRVSFSETRIVRPQFVME 120

Query: 116 LSSKGVSNWFQRKSTMDMIHNVIL------------------------EKIHVKGGRIKI 151
              K ++++F R S       + +                         ++ ++ G +  
Sbjct: 121 KPVKTMADFFDRFSRSQGALGLAIRKAREILKHNPEHPEIEHLLKQPFGRVFIENGALVY 180

Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP 211
            D  S     ++ LN           + L        +       +  + +   I A+  
Sbjct: 181 HDSLSGVAEKITGLN-----------ATLDWSESTQEIRLRADARWRGEFTKLSIDASQA 229

Query: 212 ---AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268
                     +K  L  +   I       L    +  I+ G  S+           +   
Sbjct: 230 LLLLAGGKSQIKASLNSVRGGITFTGQARLS---EYYIFDGKVSMRSPGWNQTLSWVGGT 286

Query: 269 ---------KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE-ENLLNFS 318
                          +F     +++++         N+        K+   +    +  S
Sbjct: 287 HFWGHRLKIPIVWESHFLARPMHIQMNNVTFTMGKANA----RGALKLDFQDYVPNVMGS 342

Query: 319 ENGAESMHDLNETDFFEEEEKK 340
                   +L  + FF  ++K 
Sbjct: 343 LAFDNLDLNLLGSMFFSVKKKN 364


>gi|167722207|ref|ZP_02405443.1| hypothetical protein BpseD_24554 [Burkholderia pseudomallei DM98]
          Length = 366

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 86/287 (29%), Gaps = 27/287 (9%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66
           G+G L  +V  G      F      R   E+Q +  + +   +    +I   P+   +  
Sbjct: 28  GVGALIVLVAFGLLG--FFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEA 82

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125
             +R+ ++        I  L +RA +  L      + ++ +DQP            N+  
Sbjct: 83  DGVRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTD 142

Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                               +  I V  GRI+  D+  +  + +    + I         
Sbjct: 143 LVDKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNAKHVVDQWTVGIPFIATLPSK 202

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237
                     V  +     D    A        A+++  S+ ++   L  P ++      
Sbjct: 203 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTK 256

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
           L  + +    S    V         +       R+SG   ++D  V 
Sbjct: 257 LPVDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297


>gi|253998958|ref|YP_003051021.1| hypothetical protein Msip34_1248 [Methylovorus sp. SIP3-4]
 gi|253985637|gb|ACT50494.1| conserved hypothetical protein [Methylovorus sp. SIP3-4]
          Length = 1305

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 56/386 (14%), Positives = 114/386 (29%), Gaps = 34/386 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWT--DFREDFERQATLIVGKKIAVKGGIKIHI-L 59
           R  L+ L     V      ++   +      +R D E +AT  +G+K+++ G IK     
Sbjct: 11  RFTLLTLWLAIFVFAAAVLSMRYLVLPNIDKYRADIEARATAAMGQKVSI-GEIKASWDG 69

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             P +   ++ I   E       +  +     +L +   E R+  + I QP L+    ++
Sbjct: 70  LNPHLSLYNVDIHDAE-ERPALSLGHVEASLSWLSIPLLEPRLSSIEIYQPELSIRRDAQ 128

Query: 120 GV-----SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISARF 173
           G                     +   +I V    +   D+        L+ LNL++ +  
Sbjct: 129 GTLYVAGMAMGGPSRPQFANWALRQSRIDVLDASVIWEDELRKAPPLSLTQLNLRVVSPA 188

Query: 174 LNIIS--------PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
              +          L        +   G     +       +    AK +   +      
Sbjct: 189 WKGLIGHHMFGLRALPSAGSSAPIDIRGNLYGKDISQPEDWSGTVYAKLEGTDISAWRKW 248

Query: 226 LAYPIII-DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKIS 279
           ++YP  + + +G   +  +         V+      +   LSA   +     LSG     
Sbjct: 249 ISYPFDLYEGYGAARFWLQLDDGKPSNIVSDVILSDVKTRLSASSPQATLNHLSGRLSWD 308

Query: 280 DGNVRISRYKLQSILPNSSTDED---NKTKVS---QDEENLLNFSENGAESMHDLNETDF 333
                   +  ++I  N+    D       +      ++          E + D   T  
Sbjct: 309 KHK-DGQEFTAENIKLNTPDGLDMQNGSISLRERWIKDKQWFEGRVRLDEILLDTLNT-- 365

Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKKE 359
           F       KN      +I  +   + 
Sbjct: 366 FAGYIPLPKNIKQNLQEISPTGKLEN 391


>gi|299066863|emb|CBJ38058.1| Conserved protein of unknown function [Ralstonia solanacearum
           CMR15]
          Length = 1261

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 47/338 (13%), Positives = 105/338 (31%), Gaps = 39/338 (11%)

Query: 3   RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           RR+ +G+     V  L+GA   P  + +       E Q +  + + + V    KI + P+
Sbjct: 48  RRIGLGVLIFLVVFGLLGAVGGPPLLHY-----LAETQLSKYLERPVTVG---KIRLNPY 99

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I +++  +    I  L + A +  +      + ++ +D P +    +++ 
Sbjct: 100 TLRLEIDQLHIAERDGKTPFIDIGHLHVNAAWSSVFRRGPVIEELKVDAPRVRIVRTAEQ 159

Query: 121 VSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
             N+              K   +     +   + +  G I+ IDQ     + +  L + +
Sbjct: 160 RFNFSDIIDKLTQPEVPPKPKSNEPARFVFANLQLNNGAIQFIDQPLGAQHTVDGLQIGV 219

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
                    P  +D     ++A      D     F       A++   SL I+L  L  P
Sbjct: 220 PFL---ASLPADVDIFVQPLLA---ARIDGAPLHFAGKTKPFAQSLESSLNIKLDGLELP 273

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
             +   G +       +  G  +                  R+ G   +    V      
Sbjct: 274 RYL---GYVPGPLPVAVPQGKLTTD-LTIDFQKPRTGNPVLRVHGTAGLDGLEVT----- 324

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
                  +      + + +  +   L+   +      D
Sbjct: 325 ---DAKKAPLVAAKQLRATLSDVRPLDNVYHLDALSLD 359



 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/276 (9%), Positives = 82/276 (29%), Gaps = 30/276 (10%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +     + +   +        + L      +  L     +  + +D   ++   +  G  
Sbjct: 315 TAGLDGLEVTDAKKA-PLVAAKQLRATLSDVRPLDNVYHLDALSLDGVRVDAVRAPDGSI 373

Query: 123 NWFQR--------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQV--YFLSDLN 166
           N+ Q                +T     +V + K+ +    +   D  +       L DL+
Sbjct: 374 NFAQLGGKPAPEAKPAAPAPATQPKPLDVAVGKLQLANSSVHWRDATTQPAADLVLDDLH 433

Query: 167 LQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKIQ 222
             ++ R L   + L + +     G++  +G+ + +      ++             L+  
Sbjct: 434 GDVAVRTLGGPTTLDVGAKLASGGTLNVKGSTSLEKHTGELELKLEAVKLAGIEPYLRQA 493

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL------ELSAKKSRLSGN- 275
             P      +   G +        ++            L L      + + +  +L  + 
Sbjct: 494 DAPQLQNGALSADGKIALEFGADKFNVHAEPLVATLADLALAPATRNDTALRAKQLRADI 553

Query: 276 --FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
             F ++   + ++  +   +  +    +D  T ++ 
Sbjct: 554 KSFDLAARTLALNEVRADGLQLDVLRKQDGSTVLTL 589


>gi|330993254|ref|ZP_08317190.1| AsmA family protein [Gluconacetobacter sp. SXCC-1]
 gi|329759656|gb|EGG76164.1| AsmA family protein [Gluconacetobacter sp. SXCC-1]
          Length = 828

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 57/348 (16%), Positives = 103/348 (29%), Gaps = 41/348 (11%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIE 84
           +D    R           G+++ + G + IHILP PS+  +D+ +     G  S     E
Sbjct: 33  LDPDSLRTRVIAAIEKQTGRQVRL-GALDIHILPAPSLSVRDVGLSDMAGGAYSDMLTAE 91

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK-------------STM 131
            L      + LL  E+R+ D+ +  P L+   +  G +NW                 +  
Sbjct: 92  QLQASIGIMGLLHHELRLEDVRLTHPVLHLERTEAGEANWRLSPTGAQATARPDAAATQA 151

Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQV--YFLSDLNL--------QISARFLNIISPLS 181
                V +  + V    +   D+ S       L  +NL        Q+           +
Sbjct: 152 ASEWKVQVGSVRVSNADLDWDDRLSGSRGKVVLDHINLSGVDGAQPQLDVAGHGGGGSFT 211

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
           +    G++    T        A K    +   PA   A+   I          + L GN+
Sbjct: 212 LSGHTGAINLASTAR-SGWPVALKAAFQSGGQPAGQLAVDGTIADPDHMKGYNVTLDGNV 270

Query: 239 FWNEKQPIY-------SGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR----ISR 287
              +                          +   SA  + L     +  G V     +S 
Sbjct: 271 ASLKAVESLLPGRSLPDVRRLSFRANVVDGSAAGSAGSTPLLNMLHLDTGAVDAGPYLSG 330

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335
             LQ +  ++   +D  +  SQ +        +G        +     
Sbjct: 331 LTLQGLSIDAPGPKDAVSIRSQGQWQGQGLKLSGTLGSLQQVDAAVTS 378


>gi|94271231|ref|ZP_01291914.1| AsmA [delta proteobacterium MLMS-1]
 gi|93450519|gb|EAT01673.1| AsmA [delta proteobacterium MLMS-1]
          Length = 949

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/330 (13%), Positives = 102/330 (30%), Gaps = 53/330 (16%)

Query: 33  REDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRA 90
           +E          G+++ + G ++  + P   +    I +    D       +++  S+  
Sbjct: 1   KERIAAMVYEQTGRELRIDGELEWGLWPRLRLAGDSITLGNAPDFGPEPFLELDSFSLAV 60

Query: 91  EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW------------FQRKSTMDMIHNVI 138
              PL+  E+R+  + +   HLN   +++G+ NW                 +      + 
Sbjct: 61  ATWPLIRSEVRLDLVEVSGLHLNLARNAEGIGNWEDLAGEPEPTAKPAAPGSPLPFAALA 120

Query: 139 LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD 198
           L  + ++  R+   D+ S Q   + DLNLQI A  L     + +D               
Sbjct: 121 LGGVDIRDLRVDWHDESSGQRAAIYDLNLQIGALSLGEPIEMELD--------------- 165

Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS 258
                                +             L G L ++ +   Y+     A    
Sbjct: 166 --------------------FQAASNQPDLAASGQLQGTLVYDLRGRHYALQPLHASLDL 205

Query: 259 KLLNLELSAKKSRLSGNFKISDGN--VRISRYKLQSILP--NSSTDEDNKTKVSQDEENL 314
               +     +  L G F++ +     R+  ++L  +     ++ + D            
Sbjct: 206 SGPTVPGGQAELTLRGLFELDEKAGLARVDDFRLAGLGMLVGATMEMDGLHTDQPGCRGE 265

Query: 315 LNFSENGAESMHDLNETDFFEEEEKKNKND 344
           +    N    + ++ E+   ++     +  
Sbjct: 266 IQADINDLVRVLEIFESPLAQQLSGVRERT 295


>gi|15604215|ref|NP_220730.1| outer membrane assembly protein (asmA) [Rickettsia prowazekii str.
           Madrid E]
 gi|3860907|emb|CAA14807.1| OUTER MEMBRANE ASSEMBLY PROTEIN (asmA) [Rickettsia prowazekii]
          Length = 835

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/370 (12%), Positives = 136/370 (36%), Gaps = 23/370 (6%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFESKIEGLS 87
            +++     +      + + + G IK+ +LP P++   +I++             +E + 
Sbjct: 29  NNYKGVLIDKVKEATNRNLTINGDIKLSLLPTPTISLSEIKLSSINGAKVPHLVSVEAVK 88

Query: 88  MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH------------ 135
                 PL  G I V  + + +P ++  +   G  +W    S  +               
Sbjct: 89  ASLRLFPLFRGVIEVALIELQKPTISLEVLDNGQKSWQLYISNNNNTINNNNTVQSNYTQ 148

Query: 136 -----NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 +++  + +KGG++  I++ +++++   +L  ++ +    I   +++++++  + 
Sbjct: 149 TVLELPILISHLKIKGGKVIYIEKNNEKIFNDINLETKMKSIKGPIDFTIALNALQQQIH 208

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250
            +G      K        N       I  K      ++    ++ GN          +  
Sbjct: 209 IDGHVKEIGKIIPLSTNINLAGAKIKIDGKFDSKNNSFIGNANIKGNTKTLGMPYDLNND 268

Query: 251 FSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
           +++     +   N+ +   +        +++ N  + R  L+S +  +  +   K + + 
Sbjct: 269 YTLTMSISACSKNINIRDARLHYPNIELLANTNYDMERNNLESNIIVNPGNLITKIQSNL 328

Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369
           D+ N+L    +  + + D  +    E     N+   L  + I+     K +  N     +
Sbjct: 329 DKTNIL-LQADSLKPILDALKLKTDELPPIINQKLILTTNVIRDPQAIKLQNINLSATNS 387

Query: 370 QENFSGDKMI 379
             N +G+ ++
Sbjct: 388 --NITGEIVL 395


>gi|292571955|gb|ADE29870.1| Outer membrane assembly protein [Rickettsia prowazekii Rp22]
          Length = 829

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/370 (12%), Positives = 136/370 (36%), Gaps = 23/370 (6%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFESKIEGLS 87
            +++     +      + + + G IK+ +LP P++   +I++             +E + 
Sbjct: 29  NNYKGVLIDKVKEATNRNLTINGDIKLSLLPTPTISLSEIKLSSINGAKVPHLVSVEAVK 88

Query: 88  MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH------------ 135
                 PL  G I V  + + +P ++  +   G  +W    S  +               
Sbjct: 89  ASLRLFPLFRGVIEVALIELQKPTISLEVLDNGQKSWQLYISNNNNTINNNNTVQSNYTQ 148

Query: 136 -----NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 +++  + +KGG++  I++ +++++   +L  ++ +    I   +++++++  + 
Sbjct: 149 TVLELPILISHLKIKGGKVIYIEKNNEKIFNDINLETKMKSIKGPIDFTIALNALQQQIH 208

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250
            +G      K        N       I  K      ++    ++ GN          +  
Sbjct: 209 IDGHVKEIGKIIPLSTNINLAGAKIKIDGKFDSKNNSFIGNANIKGNTKTLGMPYDLNND 268

Query: 251 FSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
           +++     +   N+ +   +        +++ N  + R  L+S +  +  +   K + + 
Sbjct: 269 YTLTMSISACSKNINIRDARLHYPNIELLANTNYDMERNNLESNIIVNPGNLITKIQSNL 328

Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369
           D+ N+L    +  + + D  +    E     N+   L  + I+     K +  N     +
Sbjct: 329 DKTNIL-LQADSLKPILDALKLKTDELPPIINQKLILTTNVIRDPQAIKLQNINLSATNS 387

Query: 370 QENFSGDKMI 379
             N +G+ ++
Sbjct: 388 --NITGEIVL 395


>gi|294341420|emb|CAZ89837.1| conserved hypothetical protein [Thiomonas sp. 3As]
          Length = 774

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/273 (10%), Positives = 91/273 (33%), Gaps = 15/273 (5%)

Query: 18  VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG 77
            G   + L  D   ++    +       + + + G I+I + P  ++      + +++  
Sbjct: 39  GGMSILLLTFDPNQYKATLIQVVQEREHRTLTLPGTIEITLFPPLTLRTGPFSLSERDSP 98

Query: 78  SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-------QRKST 130
           +  ++ + L +  +   LL  ++ V  + + +P ++    ++G  N+           + 
Sbjct: 99  AVFARADDLRLHLDLFALLRRKLVVDRVVMIKPQIHVARDAQGRLNFADLLPDSKPESAP 158

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID------- 183
                 + + ++ V+ G +   D ++     L  L++ +S           ++       
Sbjct: 159 PRSPLGLSVHRLQVEQGVLFYDDDKAKLHGQLDGLDVGLSGLDGGNAGAFHLETTARFVQ 218

Query: 184 -SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242
            ++   +   G    D  + +  +T    +    +     +        + L     W  
Sbjct: 219 PALATRIALRGKLLADPAQHSVALTDLALSAQGDVPGLKAMQAQLSADQLGLRTGSLWAL 278

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
               +    +   +  + L+ ++S       G+
Sbjct: 279 TARQWRIKTTGRTESGENLSAQISLPTLEAKGD 311


>gi|171317999|ref|ZP_02907172.1| protein of unknown function DUF748 [Burkholderia ambifaria MEX-5]
 gi|171096842|gb|EDT41717.1| protein of unknown function DUF748 [Burkholderia ambifaria MEX-5]
          Length = 1267

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 96/293 (32%), Gaps = 31/293 (10%)

Query: 3   RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           RR+ +G+     +  L+G F  P  I     R   E+Q +  + +   ++   +I + P+
Sbjct: 26  RRIGLGVLIFIVLFGLLGFFAAPPLI-----RHIAEQQLSQQLERPSTIQ---RIALNPY 77

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             ++  + + + ++        I+ L +R  +  L  G   V ++ +D P  +       
Sbjct: 78  TLNLEAEGVHVGERGGQGGFIDIDKLVVRPSWSSLFRGAPIVNEVRVDSPRFHIVRYDAQ 137

Query: 121 VSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
             N+                      +  I V  GRI   D+  ++ + + +  L I   
Sbjct: 138 RFNFTDLIEKFSKPSPKPESKPTQFSVSNIQVNDGRIDFDDRLLNEKHVVDNWTLGIPFI 197

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
                           V  +    FD    A        A+++   + ++   L  P +I
Sbjct: 198 ATLPSKTDIF------VQPKLRARFDGSPIAIDGKTKPFAQSRESEVALKFDRLDVPKLI 251

Query: 233 D-LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                 L       + S   ++         +       R+SG   ++D  V 
Sbjct: 252 SYAPAKLPVIVTSGLLSSDLAL------NFVMSGDTPALRVSGTVDLNDAKVT 298



 Score = 43.7 bits (101), Expect = 0.054,   Method: Composition-based stats.
 Identities = 45/389 (11%), Positives = 102/389 (26%), Gaps = 75/389 (19%)

Query: 40  ATLIVGKKIAVKGGIKIHILPFPSVF----FKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95
            +  +     + G       P   V       D ++  +          G+ + A  L  
Sbjct: 267 LSSDLALNFVMSGDT-----PALRVSGTVDLNDAKVTGRA-SEPLFAARGVHVAAAGLEP 320

Query: 96  LSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH-------------------- 135
           L   +   ++ IDQP ++     +GV N  +                             
Sbjct: 321 LRNVLHFDEIRIDQPVVDLSRDKQGVLNVEKLAGQPAAAPKAAAGKPAASGAAASTAAAT 380

Query: 136 ---------------------NVILEKIHVKGGRIKIID--QESDQVYFLSDLNLQISAR 172
                                ++ +    + GG I + D    +     L+ L   +   
Sbjct: 381 AAASGASGAKAEAAAKEAPPLDLTIRHFAIDGGTINVDDRVPATPTAMSLTKLAATLDGF 440

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
            L   +P    ++  S+   G    +   S     A+      A++L             
Sbjct: 441 TLQGKTPAKY-TLSTSLSHGGDIKAEGAFSVAAKQADTKLTVDALALPA----------- 488

Query: 233 DLFGNLFWNEKQPIYSGVF-SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
            L   L    +  +  G   +     +      L A+ +       +    V     K  
Sbjct: 489 -LQPYLGEATRARVLDGTLGATVNAKADWGKTPLDAQVA--DSTVSLKSLKVATPDAKAP 545

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH------DLNETDFFEEEEKKNKNDD 345
           +I+   ++ +  K  V+     + +    G            ++     E  +       
Sbjct: 546 AIVLPDASAKIAKVDVAARTAEIASVDATGLALDVKRLKDGKIDLAALAEPAQAAVPKRT 605

Query: 346 LKKDDIQYSVNKKEEKDNSHDKENQENFS 374
           + +     + +     D  + K++  NF+
Sbjct: 606 VARKAEAAAPSWHYRIDALNVKDSAANFT 634


>gi|94266043|ref|ZP_01289763.1| Uncharacterized protein involved in outer membrane biogenesis-like
           [delta proteobacterium MLMS-1]
 gi|93453403|gb|EAT03828.1| Uncharacterized protein involved in outer membrane biogenesis-like
           [delta proteobacterium MLMS-1]
          Length = 415

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 103/288 (35%), Gaps = 7/288 (2%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           + R  L+    LF ++ +    +   +     +   ER A   +G ++ + G + I  LP
Sbjct: 6   IRRTWLVATVGLFIIIALILAALLAALQSDAAKARLERTAADALGMEVKIGGRLGIAFLP 65

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             +V   D+R+ + ++    +  E + +    LPLL  E+R+  + ++   +      +G
Sbjct: 66  DLAVTLHDVRLGEHDN--ELAWAERVRLGVGLLPLLQREVRINQLTVENSRITIQRDPEG 123

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA-RFLNIISP 179
             N+       + +  + L  I +    ++ +DQ+S + +      L +   R       
Sbjct: 124 RFNFQSPAPNGESLAALELPTIFLTAATLRYVDQQSGEQFAAEGCQLTVPELRLAEGEKS 183

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI---SLKIQLFPLAYPIIIDLFG 236
             ++++             ++     +  +   ++ +     L ++LF       +    
Sbjct: 184 ALLENLTVRAELNCQTIRRDELRLDDLRLSVVGRDGSFEVEPLSLELFGARGEGALLADF 243

Query: 237 NLFWNEKQPIYSG-VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
                  +  Y    F VA  F  L   E++     L+    +    +
Sbjct: 244 TGPAPNYEIRYFLPQFRVADFFQVLTQEEIATGTMDLTVELAMQGETM 291


>gi|308049193|ref|YP_003912759.1| AsmA family protein [Ferrimonas balearica DSM 9799]
 gi|307631383|gb|ADN75685.1| AsmA family protein [Ferrimonas balearica DSM 9799]
          Length = 610

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/347 (11%), Positives = 101/347 (29%), Gaps = 40/347 (11%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESK 82
            F D   F+     +     G+++ + G I   + P   +    +++             
Sbjct: 24  FFFDLNSFKGPIADKVKQATGRELVIGGDIGWSVYPTLGLELAQVQLGNLPGEQLPPLLS 83

Query: 83  IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKI 142
           +E  S+    LPLL  E++V ++ +   HL     + G S+                   
Sbjct: 84  VEQASVGVALLPLLKRELQVEELAVSGVHLELVTLADGRSSLTGLGGEGA---------- 133

Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202
                       +  +    +D +     R++     ++  +I     A G    D   +
Sbjct: 134 -----------AKPSEAAPATDSSAAAPKRWVLGHLAVNDLTIHNDNRAAGA---DQTLA 179

Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262
             ++        +A  L++Q+      + +                          +   
Sbjct: 180 IKQLELARIEPERAAPLRLQVEVGDGDLAVSTQAEAMLTVSADFSRFQIDDWRQQLEAKG 239

Query: 263 LELSAKKSRLS----GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE-ENLLNF 317
             + A+   LS     +  +++    ++  + +     +    + + + +          
Sbjct: 240 SAIGAQPLALSLAWDADLNLAEQQFVVTNLEFKL----ADFILNGEAQANLAGVRPAFQL 295

Query: 318 SENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364
           +  G     D      +   +  +K  D  +   + +   +EE D S
Sbjct: 296 TAKGNALNLDP-----WLPADIADKGTDKSEPAPESAPAPQEEPDLS 337


>gi|240850043|ref|YP_002971436.1| AsmA family protein [Bartonella grahamii as4aup]
 gi|240267166|gb|ACS50754.1| AsmA family protein [Bartonella grahamii as4aup]
          Length = 626

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 52/384 (13%), Positives = 116/384 (30%), Gaps = 64/384 (16%)

Query: 1   MLRRVLIGLGFLFSVVL----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           M  R++  L  +F  ++    VG   +P  I     R    +  +   G  + ++   ++
Sbjct: 1   MRIRIIKFLSGIFITIIFLFGVGILVLPYLISTDAIRIRLAQDLSAWTGYNVQLRDPPRL 60

Query: 57  HILPFPSVFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           H+ P+P  F   + +  K +D +   + E + +    + LL G +   +  I +P     
Sbjct: 61  HLFPYPKAFLSGVTLTSKMDDVAPLMEAESIEVDLSVVDLLWGHVSFSETRIMRPQFVME 120

Query: 116 LSSKGVSNWFQRKSTMDMIHNVIL------------------------EKIHVKGGRIKI 151
              K ++++F R S       + +                         +I +K G +  
Sbjct: 121 KPVKTIADFFDRFSRSQGALGLAIRNTREILKHNPEHPEIEHLLKQPFGRIVIKNGVLVY 180

Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP 211
            D  S     ++ LN           + L        V       +  + +   I A+  
Sbjct: 181 HDSFSGMAEKITGLN-----------ATLDWPESTQEVRLRADARWRGEFTKLSIDASQA 229

Query: 212 ---AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268
                     ++  L  +   I       L    +  I+ G  S+               
Sbjct: 230 LPLLAGGKSHIRASLNSVRGGITFTGKARLS---EYYIFDGKVSMR--SPGWNQTLSWVG 284

Query: 269 KSRLSG-----------NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE-ENLLN 316
            ++  G           +F     +++++         N+        K+   +    + 
Sbjct: 285 GNQFWGHKFKIPIVWESHFLAQPMHIQMNNVTFTMGKANA----RGALKLDFQDYVPNVM 340

Query: 317 FSENGAESMHDLNETDFFEEEEKK 340
            S    +    L  + FF  ++K 
Sbjct: 341 GSLAFDKLDLRLLGSMFFSGKKKN 364


>gi|269104991|ref|ZP_06157687.1| AsmA protein [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268161631|gb|EEZ40128.1| AsmA protein [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 1312

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 101/319 (31%), Gaps = 11/319 (3%)

Query: 14  SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73
             + +G  +  + +D T  ++   +  T  + ++  ++G I + +   P +    + I  
Sbjct: 40  VAIGIGVLSYGVTLDLTPHKQKISQWLTKNLARETKIEGDIALTLSFSPEIDINKLTIGN 99

Query: 74  KE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM 131
            E             S +   LPLL   + +  + +D  H+      +G  NW       
Sbjct: 100 TEAMKWQPMLSSGHASAKVSLLPLLRNTLEIDYLKLDNTHVELNRDYQGKPNWVF----N 155

Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA 191
                   +    K   +KI D  + +   +S L+ Q    F   +  LS+ +     + 
Sbjct: 156 SSPKVTTSDDKTSKPLTLKITDTITAKDVSVSYLDQQTGQYFSAAVEQLSL-TKPDQWLL 214

Query: 192 EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ---PIYS 248
           +  G    +   F +T +  +        +          +++  ++             
Sbjct: 215 KAQGFVQGQSYDFSLTGDLESIINHQQGHLVAAGEFIGARLNIDADIQPWRTGVTHANID 274

Query: 249 GVFSVAGDFSKLLNLELSAKKS-RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
             +         L+L++      +++     S   + +++ K+ S +  +S         
Sbjct: 275 LDWHDTAPIKSFLDLDIGPAAPLKITTKLSASHEGIGLTKLKIDSPVTQASGHLVFALAK 334

Query: 308 SQDEENLLNFSENGAESMH 326
                N ++   +      
Sbjct: 335 KGQPLNYIDGKLDIPLIDL 353


>gi|71908942|ref|YP_286529.1| hypothetical protein Daro_3330 [Dechloromonas aromatica RCB]
 gi|71848563|gb|AAZ48059.1| Conserved hypothetical protein 2099 [Dechloromonas aromatica RCB]
          Length = 1307

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 53/350 (15%), Positives = 114/350 (32%), Gaps = 26/350 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWT--DFREDFERQATLIVGKKIAVKGGIKIHI- 58
           LR +   +   + V  V    +   +     D+R   E+ A+  VG+ + + G I+ H  
Sbjct: 40  LRILGWSVLAAWLVFAVLVLALRYTVLPKIADYRVQIEQAASRAVGQPVTI-GRIEAHWQ 98

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
              P +   D+ +  ++       +  +     +  L      +  +  D P L+    +
Sbjct: 99  GLNPDLVLDDVVLADRQG-VPAFSLARVEGVLSWQTLWRLRPTLALLAFDGPVLHVRRET 157

Query: 119 KGV-----SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISAR 172
            G       +             +  ++I ++   I   D+        L DL   +   
Sbjct: 158 NGKLTVAGMDTEGESDPAFAEWVLEQKRIRIRDATIVWDDRLRKAPPLVLEDLQFALDNS 217

Query: 173 FLNIISPLSI---DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
                  LS    D++   +   G    D   +   ++     +     L      + YP
Sbjct: 218 GRRHRFGLSAAPPDALAARIDIRGEVKGDLGEALDNLSGKVFVELDYADLAGWQPWVDYP 277

Query: 230 III-DLFGNLFWNEKQPIYSGVFSVA--------GDFSKLLNLELSAKKSRLSGNFKISD 280
           + +    G L         +G  +              KL  L+L++ + RL G +K  +
Sbjct: 278 VHLPQGRGALRIWGDIADGAGKLTADVALEELRISLGRKLPELDLASMRGRLEGRYKADE 337

Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL-NFSENGAESMHDLN 329
               ++ +K++ +  +         KV   ++      S N + S  DL+
Sbjct: 338 --WALAGHKVELLTQDGIRIAPTDFKVEWRQDPKSAAISGNASASFLDLS 385


>gi|53716222|ref|YP_106394.1| hypothetical protein BMAA1845 [Burkholderia mallei ATCC 23344]
 gi|121597648|ref|YP_990450.1| hypothetical protein BMASAVP1_0850 [Burkholderia mallei SAVP1]
 gi|124381349|ref|YP_001024943.1| hypothetical protein BMA10229_1140 [Burkholderia mallei NCTC 10229]
 gi|126446211|ref|YP_001079285.1| hypothetical protein BMA10247_A2113 [Burkholderia mallei NCTC
           10247]
 gi|254176140|ref|ZP_04882798.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
 gi|254203383|ref|ZP_04909744.1| conserved hypothetical protein [Burkholderia mallei FMH]
 gi|254356070|ref|ZP_04972347.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
 gi|52422192|gb|AAU45762.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
 gi|121225446|gb|ABM48977.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
 gi|126239065|gb|ABO02177.1| conserved hypothetical protein [Burkholderia mallei NCTC 10247]
 gi|147745622|gb|EDK52701.1| conserved hypothetical protein [Burkholderia mallei FMH]
 gi|148025053|gb|EDK83222.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
 gi|160697182|gb|EDP87152.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
 gi|261826269|gb|ABN00164.2| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
          Length = 1307

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 86/287 (29%), Gaps = 27/287 (9%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66
           G+G L  +V  G      F      R   E+Q +  + +   +    +I   P+   +  
Sbjct: 28  GVGALIVLVAFGLLG--FFAAPPLIRHIAEQQLSQQLERPATIA---RIAFNPYTLRLEA 82

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125
             +R+ ++        I  L +RA +  L      + ++ +DQP            N+  
Sbjct: 83  DGVRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTD 142

Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                               +  I V  GRI+  D+  +  + +    + I         
Sbjct: 143 LVDKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSK 202

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237
                     V  +     D    A        A+++  S+ ++   L  P ++      
Sbjct: 203 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTK 256

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
           L  + +    S    V         +       R+SG   ++D  V 
Sbjct: 257 LPVDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297


>gi|126442637|ref|YP_001061416.1| hypothetical protein BURPS668_A0410 [Burkholderia pseudomallei 668]
 gi|126222128|gb|ABN85633.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
          Length = 1321

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 86/287 (29%), Gaps = 27/287 (9%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66
           G+G L  +V  G      F      R   E+Q +  + +   +    +I   P+   +  
Sbjct: 28  GVGALIVLVAFGLLG--FFAAPPLIRHIAEQQLSQQLERPATIA---RIAFNPYTLRLEA 82

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125
             +R+ ++        I  L +RA +  L      + ++ +DQP            N+  
Sbjct: 83  DGVRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTD 142

Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                               +  I V  GRI+  D+  +  + +    + I         
Sbjct: 143 LVDKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNAKHVVDQWTVGIPFIATLPSK 202

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237
                     V  +     D    A        A+++  S+ ++   L  P ++      
Sbjct: 203 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTK 256

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
           L  + +    S    V         +       R+SG   ++D  V 
Sbjct: 257 LPVDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297


>gi|167896831|ref|ZP_02484233.1| hypothetical protein Bpse7_24025 [Burkholderia pseudomallei 7894]
          Length = 368

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68
           G    + LV    +  F      R   E+Q +  + +   +    +I   P+   +    
Sbjct: 28  GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125
           +R+ ++        I  L +RA +  L      + ++ +DQP            N+    
Sbjct: 85  VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144

Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                             +  I V  GRI+  D+  +  + +    + I           
Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239
                   V  +     D    A        A+++  S+ ++   L  P ++      L 
Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
            + +    S    V         +       R+SG   ++D  V 
Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297


>gi|76817706|ref|YP_336915.1| hypothetical protein BURPS1710b_A1758 [Burkholderia pseudomallei
           1710b]
 gi|76582179|gb|ABA51653.1| putative membrane protein [Burkholderia pseudomallei 1710b]
          Length = 1348

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68
           G    + LV    +  F      R   E+Q +  + +   +    +I   P+   +    
Sbjct: 59  GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 115

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125
           +R+ ++        I  L +RA +  L      + ++ +DQP            N+    
Sbjct: 116 VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 175

Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                             +  I V  GRI+  D+  +  + +    + I           
Sbjct: 176 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 235

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239
                   V  +     D    A        A+++  S+ ++   L  P ++      L 
Sbjct: 236 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 289

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
            + +    S    V         +       R+SG   ++D  V 
Sbjct: 290 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 328


>gi|34496902|ref|NP_901117.1| hypothetical protein CV_1447 [Chromobacterium violaceum ATCC 12472]
 gi|34102758|gb|AAQ59122.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 1097

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/361 (12%), Positives = 117/361 (32%), Gaps = 28/361 (7%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDI 69
            +   +++  +           ++     A    G+++A+    ++ I+P+   +    +
Sbjct: 27  AIACALVLAFWAFLGLAAPHLLQKAAADWARKH-GRQLAIS---EVRIVPWSMELTLDGV 82

Query: 70  RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF---- 125
            + + +      +   + + A    +L G  +  +  +D P L       G+ NW     
Sbjct: 83  SLREGDG-KPLFQARRIYLNAALYAVLMGRWQASEFLLDTPQLWLERDKDGLWNWGRFVA 141

Query: 126 --------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
                   +  +  + +  + L  I ++ G+I+I D  +        + + +S   L+ +
Sbjct: 142 DISGPPKLEDGTAPEKLPRLKLNAIDLRNGQIRISDHLAGHHGNFRLMPINLSLNNLSTL 201

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-PLAYPIIIDLFG 236
                 ++   +   G  ++        + ++  A  + + L         +       G
Sbjct: 202 EENGRYTLHAEMEGGGRFDWQGSMRLQPLQSSGEASMQGLPLASAWDYVRPHFAAAKPDG 261

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
            L  N +       F ++G    L    LSA    L       DG + +   ++     +
Sbjct: 262 ELSVNARY-----QFDMSGASPDLTISSLSASLKGLKLRAPAGDGMLDLPELRVDGGALD 316

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESM----HDLNETDFFEEEEKKNKNDDLKKDDIQ 352
            S       KV  +   L    +   +          + +    +  K     +K D+++
Sbjct: 317 LSRSLLTVAKVELNHGKLAASRDAAGQLDWLRALPPTKPEAKPAQPAKPSPWIVKIDNLR 376

Query: 353 Y 353
           +
Sbjct: 377 F 377



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 80/291 (27%), Gaps = 34/291 (11%)

Query: 39  QATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG 98
             +  +       G  +  +     V    + + +  +         LS+       +  
Sbjct: 603 ALSADLKLNATSAG--RWSLGGQLKVA--KMALQEPGEPLPLLGWNTLSLSQLQAQGMPL 658

Query: 99  EIRVFDMYIDQPHLNFYLSSKGVSNWF---------QRKSTMDMIHNVILEKIHVKGGRI 149
           ++ + D+ +DQP     L  +   NW                  +  V +  IHV+ G +
Sbjct: 659 KVSINDVRLDQPRARLILDPQRNLNWQKIFARQPAKPASGNSAPLPQVDVHSIHVQNGAV 718

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK---RSAFKI 206
           +  D      +     +L+ S + L+  +       +G +  +G  +   +   R A   
Sbjct: 719 EFADHGMTPDFATRMHHLRGSIQNLSTRA-----GGRGRITLDGAVDQYGEVKVRGALSP 773

Query: 207 TANFPAKNKAISLKIQLFPLAYPIIIDLFGN----------LFWNEKQPIYSGVFSVAGD 256
            +   + +  +           P  ++  G           L +        G   +  D
Sbjct: 774 MSPTDSTDILLDFHNLALNNLNPYSMNFAGWQVKDGKLSLELRYLLDHRQLKGENRIVID 833

Query: 257 FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ---SILPNSSTDEDNK 304
             +L       K   L     ++       R  L    +   +       +
Sbjct: 834 SIQLGEELKGDKSPHLPLKLAVALLEDSDGRIDLDLPVAGSLDDPQFSYGQ 884


>gi|237745441|ref|ZP_04575921.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
 gi|229376792|gb|EEO26883.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
          Length = 1099

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/344 (11%), Positives = 96/344 (27%), Gaps = 27/344 (7%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68
             L   ++   F +P  +     +      A     +++ V+   KI + PF  +V  + 
Sbjct: 28  ASLIVAIVAAVFFLPGIV-----QSKAREFAAENFNRELTVQ---KIELDPFRLTVRLEG 79

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ-- 126
           +R+ +          + L +             +  + +  P ++      G  N     
Sbjct: 80  VRLSEPGQERAFVSFDHLFVEFSPRTFSEFNPVIRQIRLVNPTVHIVRRQSGKYNVDDMV 139

Query: 127 -----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                 +          +  I ++ G I++ D    +   + +LN+ I            
Sbjct: 140 TYLSKPREDDAGRTLFSINNIRIENGTIRVDDDVRKKRLLIEELNVGIPFIANMP----- 194

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
              ++  V        +  +      +      K  ++ I+L  L  P  +   G L ++
Sbjct: 195 -AEVEVFVPFSIRARINRDKIELVGKSRPVLNKKDGTIGIKLDKLDLPTYL---GYLPFD 250

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
               + SG  S           E   +   + G+       +  S      +        
Sbjct: 251 PGFKLKSGKLSAD-LDMTFAKREGDKRPIFVEGDVVFHSLRLTESD-NAHLLDIPELKIG 308

Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
             K+ +   +  L   S        + N+   +  E        
Sbjct: 309 IGKSDLVSGKIKLNRVSVENPRVFLERNKDGQWNFERLVKAGKK 352



 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/330 (13%), Positives = 100/330 (30%), Gaps = 52/330 (15%)

Query: 46  KKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDM 105
           + I V+G           V F  +R+ + ++      I  L +      L+SG+I++  +
Sbjct: 276 RPIFVEGD----------VVFHSLRLTESDNA-HLLDIPELKIGIGKSDLVSGKIKLNRV 324

Query: 106 YIDQPHLNFYLSSKGVSNW-----------------FQRKSTMDMIHNVILEKIHVKGGR 148
            ++ P +    +  G  N+                    K+       V L++  V GG+
Sbjct: 325 SVENPRVFLERNKDGQWNFERLVKAGKKPAEKTGTAENEKTASRRTLAVDLKQFVVNGGQ 384

Query: 149 IKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208
           +  +D+  ++   +S  N  ++   L++       ++   V           R     + 
Sbjct: 385 LHFLDRAYNRPVNISARNFGLNVVNLSLDVSGRNAAVDSVVS-------TGTRITLVHSM 437

Query: 209 NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268
                      K ++   A     D  G  F   +  I               N +++  
Sbjct: 438 PELLDRLREKDKAKVAQEAMGTAADSTGFHFRIRRAAIKD-------WSLSFENRQVAQP 490

Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328
                   + S  N+        S+  N       K           N + +  ++  D+
Sbjct: 491 IITRVSRLEASAENLS------DSLEKNVPLFMQAKVNDRGAIVVKGNIAVSPLKADLDM 544

Query: 329 N----ETDFFEEEEKKNKNDDLKKDDIQYS 354
           +    +  F +       N  LK+ D+   
Sbjct: 545 DVREVDIRFIQPYIDSYVNLSLKRADMSVK 574


>gi|115359570|ref|YP_776708.1| hypothetical protein Bamb_4825 [Burkholderia ambifaria AMMD]
 gi|115284858|gb|ABI90374.1| protein of unknown function DUF748 [Burkholderia ambifaria AMMD]
          Length = 1268

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 95/293 (32%), Gaps = 31/293 (10%)

Query: 3   RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           RR+ +G+     +  L+G F  P  I     R   E+Q +  + +   ++   +I + P+
Sbjct: 26  RRIGLGVLIFIVLFGLLGFFAAPPLI-----RHIAEQQLSQQLDRPSTIQ---RIALNPY 77

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             ++    + + ++        I+ L +R  +  L  G   V ++ +D P  +       
Sbjct: 78  TLNLEADGVHVGERGGQGGFIDIDKLVVRPSWSSLFRGAPIVNEVRVDSPRFHIVRYDAQ 137

Query: 121 VSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
             N+                      +  I V  GRI   D+  ++ + + +  L I   
Sbjct: 138 RFNFTDLIEKFSKPSPKPESKPTQFSVSNIQVNDGRIDFDDRLLNEKHVVDNWTLGIP-- 195

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
                           V  +    FD    A        A+++   + ++   L  P +I
Sbjct: 196 ----FIATLASKTDIFVQPKLRARFDGSPIAIDGKTKPFAQSRESEVALKFDRLDVPKLI 251

Query: 233 D-LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                 L       + S   ++         +       R+SG   ++D  V 
Sbjct: 252 SYAPAKLPVIVTSGLLSSDLTL------NFVMSGDTPTLRVSGTVDLNDAKVT 298



 Score = 46.8 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 44/361 (12%), Positives = 101/361 (27%), Gaps = 64/361 (17%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +V   D ++  +          G+ + A  L  L   +   ++ +DQP ++     +GV 
Sbjct: 289 TVDLNDAKVTGRA-SEPLFAARGVHVAAAGLEPLRNVLHFDEIRLDQPVVDLARDKQGVL 347

Query: 123 NWF-----------------------------------------QRKSTMDMIHNVILEK 141
           N                                           +  +      ++ +  
Sbjct: 348 NVEKLAGQPAAAPKAAAGKPAASGAAASTATATAAASGASGAKAETAAKEAPPLDLTIRH 407

Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201
             + GG I + D+       +S            + + L   +++G   A+ T +    R
Sbjct: 408 FAIDGGTINVDDRVPATPTAMS---------LTKLAATLDGFTLQGKTPAKYTLSTSLSR 458

Query: 202 SA-FKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF-SVAGDFSK 259
               K    F    K    K+ +  LA P    L   L    +  +  G   +     + 
Sbjct: 459 GGDVKAEGAFSVAAKQADTKLTVDALALPA---LQPYLGEATRARVLDGTLGATVNATAD 515

Query: 260 LLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319
                L A+ +       +    +     K  +I+   ++ +  K  V+     + +   
Sbjct: 516 WGKTPLDAQIA--DSTVSLKSLKLATPDAKAPAIVLPDASAKIAKVDVATRTAEIASVDA 573

Query: 320 NGAESMH------DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENF 373
            G            ++     E  +       + +     +       D  + K++  NF
Sbjct: 574 TGLALDVKRLKDGKIDLAALAEPAQAAVPKRTVARKAEAAAPTWHYRIDALNVKDSAANF 633

Query: 374 S 374
           +
Sbjct: 634 T 634


>gi|167741199|ref|ZP_02413973.1| hypothetical protein Bpse14_24241 [Burkholderia pseudomallei 14]
          Length = 370

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68
           G    + LV    +  F      R   E+Q +  + +   +    +I   P+   +    
Sbjct: 28  GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125
           +R+ ++        I  L +RA +  L      + ++ +DQP            N+    
Sbjct: 85  VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144

Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                             +  I V  GRI+  D+  +  + +    + I           
Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239
                   V  +     D    A        A+++  S+ ++   L  P ++      L 
Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
            + +    S    V         +       R+SG   ++D  V 
Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297


>gi|291614553|ref|YP_003524710.1| hypothetical protein Slit_2095 [Sideroxydans lithotrophicus ES-1]
 gi|291584665|gb|ADE12323.1| conserved hypothetical protein [Sideroxydans lithotrophicus ES-1]
          Length = 1273

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 102/321 (31%), Gaps = 20/321 (6%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPS 63
           +L+ +     ++ +    +P   D   + E     A++ +G+ + + G I+       P 
Sbjct: 25  LLLAIAGALVLLTLRYRILP---DIERYHEQITAAASVAIGQPLHI-GRIEADWDGLRPR 80

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
           +   +++I  K+       +  L     +  L + E+R   + ID P L+    ++G   
Sbjct: 81  LLLSEVQILDKQGHV-ALSLPRLENTVAWTSLFTAELRFQRLEIDSPDLSVRRDAQGHWF 139

Query: 124 WFQRK-------STMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLN 175
                               +    + ++ GRI   D      +  L  ++L I  RF  
Sbjct: 140 VAGIPLEGQSAEGPDSADWLLHQSNVVIRDGRITWQDDLRGAPLLALEHVDLSIDNRFGR 199

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
               +   +           +          T     + +  +       LA+   + L 
Sbjct: 200 HRFAVLASA---PERLASRLDVRGNFYGDSFTDMSDWRGQLYTQLDYADVLAWKPWVSLP 256

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS---GNFKISDGNVRISRYKLQS 292
                 +        F      S   ++ L+  ++RLS       + +   RI  ++L+ 
Sbjct: 257 NAFKHGKGALRMWLGFEQGQLSSVDADVALAGVRARLSEELPQLDLKEMRGRIGWHQLER 316

Query: 293 ILPNSSTDEDNKTKVSQDEEN 313
               ++     K +   + + 
Sbjct: 317 GFEVNTQRLALKMRDGFELKP 337


>gi|167913521|ref|ZP_02500612.1| hypothetical protein Bpse112_23740 [Burkholderia pseudomallei 112]
          Length = 374

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68
           G    + LV    +  F      R   E+Q +  + +   +    +I   P+   +    
Sbjct: 28  GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125
           +R+ ++        I  L +RA +  L      + ++ +DQP            N+    
Sbjct: 85  VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144

Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                             +  I V  GRI+  D+  +  + +    + I           
Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239
                   V  +     D    A        A+++  S+ ++   L  P ++      L 
Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
            + +    S    V         +       R+SG   ++D  V 
Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297


>gi|167826764|ref|ZP_02458235.1| hypothetical protein Bpseu9_24020 [Burkholderia pseudomallei 9]
          Length = 373

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68
           G    + LV    +  F      R   E+Q +  + +   +    +I   P+   +    
Sbjct: 28  GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125
           +R+ ++        I  L +RA +  L      + ++ +DQP            N+    
Sbjct: 85  VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144

Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                             +  I V  GRI+  D+  +  + +    + I           
Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239
                   V  +     D    A        A+++  S+ ++   L  P ++      L 
Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
            + +    S    V         +       R+SG   ++D  V 
Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297


>gi|167848280|ref|ZP_02473788.1| hypothetical protein BpseB_23631 [Burkholderia pseudomallei B7210]
          Length = 366

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68
           G    + LV    +  F      R   E+Q +  + +   +    +I   P+   +    
Sbjct: 28  GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125
           +R+ ++        I  L +RA +  L      + ++ +DQP            N+    
Sbjct: 85  VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144

Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                             +  I V  GRI+  D+  +  + +    + I           
Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239
                   V  +     D    A        A+++  S+ ++   L  P ++      L 
Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
            + +    S    V         +       R+SG   ++D  V 
Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297


>gi|254254715|ref|ZP_04948032.1| hypothetical protein BDAG_04028 [Burkholderia dolosa AUO158]
 gi|124899360|gb|EAY71203.1| hypothetical protein BDAG_04028 [Burkholderia dolosa AUO158]
          Length = 1278

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/291 (17%), Positives = 99/291 (34%), Gaps = 28/291 (9%)

Query: 3   RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           RR+ IG+     +  L+G F  P  I     R   E+Q +  + +  +++   +I + P+
Sbjct: 26  RRIGIGILIFIVLFGLLGFFAAPPLI-----RHVAEQQLSRQLDRPASIQ---RIALNPY 77

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             ++    I + ++        I  L +R  +  L  G   V ++ +D P          
Sbjct: 78  TLNLEADGIHVGERGGQGDFIDIGKLVVRPSWSSLFRGAPIVDEVRVDAPRFRIVRYDAQ 137

Query: 121 VSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
             N+              D   +  +  I +  GRI   D+  ++ + + +  L I    
Sbjct: 138 RFNFTDLIEKFSTPSKPDDKPAHFSVSNIQINDGRIDFDDRLLNEKHVVDNWMLGIPYVA 197

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
                          V  +    FD    A        A+++   + +Q   L  P +I 
Sbjct: 198 TLPSKTDIF------VEPKLRARFDGSPIAIDGKTKPFAQSRESEIALQFDRLDVPKLIS 251

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                       + SG+ S +    K + +       R+SG   ++D  V 
Sbjct: 252 ---YAPAKLPVVVTSGLLS-SNLTLKFV-MSGDTPTLRVSGTVDLNDAKVT 297



 Score = 42.2 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 43/340 (12%), Positives = 88/340 (25%), Gaps = 78/340 (22%)

Query: 40  ATLIVGKKIAVKGGIKIHILPFPSVF----FKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95
            +  +  K  + G       P   V       D ++             G+ + A  L  
Sbjct: 266 LSSNLTLKFVMSGDT-----PTLRVSGTVDLNDAKVTGLA-SEPLFAARGVHVAAAGLEP 319

Query: 96  LSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM---------------------- 133
           L   +   ++ +D+P ++     +GV N  +  +                          
Sbjct: 320 LRNVLHFDEIRLDRPVVDLSRDKQGVLNVEKLAAAPTDASGKRAASAAAAASGASTASTA 379

Query: 134 -----------------------------IHNVILEKIHVKGGRIKIID--QESDQVYFL 162
                                          ++ +    + GG I I D          L
Sbjct: 380 STASTASTASASAADAASGAKAAAAAKTPPLDLTIRHFAIDGGTINIDDRMPAPPTAMSL 439

Query: 163 SDLNLQISARFLNIISPLSID-----SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217
           + L   +    L   +P         S  G V AEGT +   KR+  K+  +  A     
Sbjct: 440 TKLAATLDGFTLQGNAPAKYTLSTSLSRGGDVKAEGTFSVAAKRADTKLNVDALALPALQ 499

Query: 218 SL---KIQLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLLNLELSAKKSRLS 273
                  +   L   +   +   + W +          +++    KL   +  A    L+
Sbjct: 500 PYLGDATRARVLDGTLGATVDAKVDWGKTPLDAQVADSTISVKSLKLAAPDAKAPAIALA 559

Query: 274 ------GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                     ++     I+      +  +    +D +  V
Sbjct: 560 DATAKIAKVDVAARVAEIASVDANGLALDVKRLKDGRIDV 599


>gi|172064380|ref|YP_001812031.1| hypothetical protein BamMC406_5371 [Burkholderia ambifaria MC40-6]
 gi|171996897|gb|ACB67815.1| protein of unknown function DUF748 [Burkholderia ambifaria MC40-6]
          Length = 1271

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 95/293 (32%), Gaps = 31/293 (10%)

Query: 3   RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           RR+ +G+     +  L+G F  P  I     R   E+Q +  + +   ++   +I + P+
Sbjct: 26  RRIGLGVLIFIVLFGLLGFFAAPPLI-----RHIAEQQLSQQLDRPSTIQ---RIALNPY 77

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             ++    + + ++        I+ L +R  +  L  G   V ++ +D P  +       
Sbjct: 78  TLNLEADGVHVGERGGQGGFIDIDKLVVRPSWSSLFRGAPIVNEVRVDSPRFHIVRYDAQ 137

Query: 121 VSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
             N+                      +  I V  GRI   D+  ++ + + +  L I   
Sbjct: 138 RFNFTDLIEKFSKPSPKPESKPTQFSVSNIQVNDGRIDFDDRLLNEKHVVDNWTLGIP-- 195

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
                           V  +    FD    A        A+++   + ++   L  P +I
Sbjct: 196 ----FIATLASKTDIFVQPKLRARFDGSPIAIDGKTKPFAQSRESEVALKFDRLDVPKLI 251

Query: 233 D-LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                 L       + S   ++         +       R++G   ++D  V 
Sbjct: 252 SYAPAKLPVIVTSGLLSSDLTL------NFVMSGDTPTLRVAGTIDLNDAKVT 298



 Score = 41.4 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 45/361 (12%), Positives = 101/361 (27%), Gaps = 64/361 (17%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           ++   D ++  +          G+ + A  L  L   +   ++  DQP ++      GV 
Sbjct: 289 TIDLNDAKVTGRA-SEPLFAARGVHVAAARLEPLRNVLHFDEIRFDQPVVDLARDKHGVL 347

Query: 123 NWF-----------------------------------------QRKSTMDMIHNVILEK 141
           N                                           +  +      ++ +  
Sbjct: 348 NVEKLAGQPAAAPKAAAGQPAASGAAASTAGATAAASGASSAKAETAAKAAPPLDLTIRH 407

Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201
             + GG I + D+       +S + L          + L   +++G   A+ T +    R
Sbjct: 408 FAIDGGTINVDDRVPATPTAMSLIKL---------AATLDGFTLQGKTPAKYTLSTSLSR 458

Query: 202 SA-FKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF-SVAGDFSK 259
               K    F    K    K+ +  LA P    L   L    +  +  G   +     + 
Sbjct: 459 GGDVKAEGAFSVAAKQADTKLTVDTLALPA---LQPYLGEATRARVLDGTLGATVNAKAD 515

Query: 260 LLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319
                L A+ +       +    V     K  +I+   ++ +  K  V+     + +   
Sbjct: 516 WGKTPLDAQIA--DSTVSLKSLKVATPDAKAPAIVLPDASAKIAKVDVAARTAEIASVDA 573

Query: 320 NGAESMH------DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENF 373
            G            ++     E  +       + +     + +     D  + K++  NF
Sbjct: 574 TGLALDVKRLKDGKIDLAALAEPAQAAVPQRTVARKAEAAAPSWHYRIDALNVKDSAANF 633

Query: 374 S 374
           +
Sbjct: 634 T 634


>gi|186475753|ref|YP_001857223.1| AsmA family protein [Burkholderia phymatum STM815]
 gi|184192212|gb|ACC70177.1| AsmA family protein [Burkholderia phymatum STM815]
          Length = 810

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 59/151 (39%), Gaps = 16/151 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------------HILPFPSVFFKDIR 70
             L  DW   R     + +  +G+  A++G +K+              + +P    ++I 
Sbjct: 28  FILTFDWNRARPYVNEKVSEAIGRPFAIEGDLKVGWRHPVGETGWRAWVLWPRFSAQNIT 87

Query: 71  IDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128
           I   +       + ++ +  + + LPLL+ +I +  + +  P ++      G +NW  + 
Sbjct: 88  IANPDWTRQKHFATLDEIDFQVKVLPLLAHDIVIPAINLVNPSVDLERLLDGRNNWTFKL 147

Query: 129 STMDMI--HNVILEKIHVKGGRIKIIDQESD 157
            +        + L  I +  G I + DQ+  
Sbjct: 148 KSSAQPSEWKLDLHDIQLNKGMIALSDQQKK 178


>gi|237509772|ref|ZP_04522487.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
 gi|235001977|gb|EEP51401.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
          Length = 1321

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 86/287 (29%), Gaps = 27/287 (9%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66
           G+G L  +V  G      F      R   E+Q +  + +   +    +I   P+   +  
Sbjct: 28  GVGALIVLVAFGLLG--FFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEA 82

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125
             +R+ ++        I  L +RA +  L      + ++ +DQP            N+  
Sbjct: 83  DGVRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTD 142

Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                               +  I V  GRI+  D+  +  + +    + I         
Sbjct: 143 LVDKFSRPLPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSK 202

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237
                     V  +     D    A        A+++  S+ ++   L  P ++      
Sbjct: 203 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTK 256

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
           L  + +    S    V         +       R+SG   ++D  V 
Sbjct: 257 LPVDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297


>gi|167921459|ref|ZP_02508550.1| hypothetical protein BpseBC_23113 [Burkholderia pseudomallei
           BCC215]
          Length = 369

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68
           G    + LV    +  F      R   E+Q +  + +   +    +I   P+   +    
Sbjct: 28  GVGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125
           +R+ ++        I  L +RA +  L      + ++ +DQP            N+    
Sbjct: 85  VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144

Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                             +  I V  GRI+  D+  +  + +    + I           
Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNAKHVVDQWTVGIPFVATLPSKTD 204

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239
                   V  +     D    A        A+++  S+ ++   L  P ++      L 
Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPHLLSYAPTKLP 258

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
            + +    S    V         +       R+SG   ++D  V 
Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297


>gi|134280804|ref|ZP_01767514.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
 gi|134247826|gb|EBA47910.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
          Length = 1321

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 86/287 (29%), Gaps = 27/287 (9%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66
           G+G L  +V  G      F      R   E+Q +  + +   +    +I   P+   +  
Sbjct: 28  GVGALIVLVAFGLLG--FFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEA 82

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125
             +R+ ++        I  L +RA +  L      + ++ +DQP            N+  
Sbjct: 83  DGVRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTD 142

Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                               +  I V  GRI+  D+  +  + +    + I         
Sbjct: 143 LVDKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNAKHVVDQWTVGIPFIATLPSK 202

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237
                     V  +     D    A        A+++  S+ ++   L  P ++      
Sbjct: 203 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTK 256

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
           L  + +    S    V         +       R+SG   ++D  V 
Sbjct: 257 LPVDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297


>gi|73537463|ref|YP_297830.1| hypothetical protein Reut_B3628 [Ralstonia eutropha JMP134]
 gi|72120800|gb|AAZ62986.1| Protein of unknown function DUF748 [Ralstonia eutropha JMP134]
          Length = 1304

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/344 (10%), Positives = 93/344 (27%), Gaps = 42/344 (12%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R++ + +       L        F      +   E+ AT  +G+K+ + G   +      
Sbjct: 16  RKLALRVAGGVVAALAMFGLAGYFGGPPLIKSLIEKNATEALGRKVTL-GEAHVRPF-EL 73

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +    D  I +++  +    +  L        +      V  ++ID+  ++    + G  
Sbjct: 74  AATLTDFTIYERDGKTPAVTLGELEADTSLASVWHLAPVVDSLHIDRLAVHVVREADGRL 133

Query: 123 NWFQRKST---------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
           ++   +                   +  I V G  +   D+ +     + +L L +    
Sbjct: 134 SFADIQDKLAAQPPKPPDAKPARFSVNNIAVTGSSVAYEDKVAGSNVRVDNLTLTLPFLS 193

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP---- 229
                   +           + + +    A   T    A ++   L +    L       
Sbjct: 194 NLPHDVEIVT------RPTLSAHVNGTPLALDGTVLPFADSRETHLNVNFDGLDVARFMP 247

Query: 230 ------------IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GNF 276
                        ++D    L + +++       S      + L++   A    +S G  
Sbjct: 248 FAPKLKDADVKHGLLDTRLTLGFRQQKDKQDIFVS-GTAALRELDVRTLAGAPLISNGKL 306

Query: 277 KISDGNV-------RISRYKLQSILPNSSTDEDNKTKVSQDEEN 313
                 V        +    +  +   +    D    ++     
Sbjct: 307 AFDIDRVEPLARQAHLRSVDIDGLNVAAVRRADGSLNLATAFVP 350


>gi|167564866|ref|ZP_02357782.1| hypothetical protein BoklE_20090 [Burkholderia oklahomensis EO147]
          Length = 393

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 90/294 (30%), Gaps = 29/294 (9%)

Query: 3   RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R  IG+    +V  L+G F  P  I     R   E+Q +  + +   +    +I   P+
Sbjct: 25  KRTGIGVLIFLAVFGLLGFFAAPPLI-----RHVAEQQLSQQLDRPATIS---RIAFNPY 76

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + + ++        I  L +RA +  L      V ++ +DQP  +       
Sbjct: 77  TLRLEADGVHVGERGGQGDFVDIGKLVVRASWTSLARFAPIVDEVRLDQPRFHIVRYDAQ 136

Query: 121 VSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
             N+                      +  I V  GRI+  D+  +  + +   ++ I   
Sbjct: 137 RFNFTDLVDKFSKPSPQPSTKPARFSVSNIQVNDGRIEFDDRLLNAKHVVDQWSIGIPFI 196

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
                           V  +     D    A        A+++  S+ ++   L  P ++
Sbjct: 197 ATLPSKSDIF------VTPKLRARLDGSPIALDGKTKPFAQSRESSIDLKFDGLDVPRLL 250

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
                     +         +    +    +       R+SG   ++D  V   
Sbjct: 251 SYAPT-KLPVEVRSGKLSSDL----NVNFAMSGDTPALRVSGTVDLNDAQVTSP 299


>gi|311695905|gb|ADP98778.1| AsmA family protein [marine bacterium HP15]
          Length = 721

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/355 (12%), Positives = 104/355 (29%), Gaps = 44/355 (12%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLS 87
           +  D++   E+         + ++G I    +P   +    +    +  G     +E L 
Sbjct: 30  NPNDYKPQIEQAVEDATNLDLVLEGDIGWSFIP-LGLELNSVEATLE--GDRFVALEQLV 86

Query: 88  MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------------------- 124
            + +F  L++   RV    +D       +  +G  NW                       
Sbjct: 87  AQIDFWSLIAMSPRVNTFVLDGLDARLEVDEQGNGNWTRIMPEKAAGAATEETAGTQDEQ 146

Query: 125 -FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
             + +       N  +E + +   ++   D+ + Q   L +  +  S   L    PL I 
Sbjct: 147 AQESEGGGGEPLNFNVENVQISNAQVHYTDKSTGQSVTLENFTVNASNITLGSEFPLEIG 206

Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKIQLFPLAYPI-----IIDLFGN 237
               +       + +    + ++ AN      A+S L         P        +L G+
Sbjct: 207 FRVATTQPTFEVDGN---ISARLAANEALNEFAVSGLNAVFDMTGEPFGGKEVTAELAGS 263

Query: 238 LFWNEKQPIYSGV-FSVAGDFSK---LLNLELSAKKSRLSGNFKISDGNVR--ISRYKLQ 291
              N +    +   F+ +         L++     K  LSG   I++ +++  ++     
Sbjct: 264 ARANLENETANLSGFTASLANLNLSTDLDVTGFGDKPTLSGEISIAEFSLKDLLNNLGQP 323

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346
            +  +     +     +                  D  +T F         +  +
Sbjct: 324 PVETSDPDVLEAIAFSTGIGGPAGKVELTDLTIKLD--DTTFTGSGSYNLADTGV 376


>gi|298207556|ref|YP_003715735.1| outer membrane assembly protein [Croceibacter atlanticus HTCC2559]
 gi|83850192|gb|EAP88060.1| outer membrane assembly protein [Croceibacter atlanticus HTCC2559]
          Length = 884

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 54/383 (14%), Positives = 117/383 (30%), Gaps = 40/383 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKG---GIKIHI 58
           ++++L   G    ++++G    P       F+   E+     +   +  +     + + +
Sbjct: 1   MKKILKIFGIFVLILVIGLIAAPFL-----FKGTIEKLIKKTINNNVNAQVEWRDLDLTL 55

Query: 59  ---LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE---IRVFDMYIDQP 110
               P  +V  KD  +   +   G   +  E L ++     LL  E   I+V ++ +++ 
Sbjct: 56  FSSFPDATVVIKDFSVVNNDPFKGDTLASGERLELQMGIKQLLKKENEQIKVDELNLEKA 115

Query: 111 HLNFYLSSKGVSNWFQRKSTM----------DMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           ++N  + S G +N+   K                    L    +K  RI  +D+ +   +
Sbjct: 116 YINIKVDSLGNANYDIAKEQPQTIETPTDTTSSGFTFDLSHYEIKDSRINYLDESTKTFF 175

Query: 161 FLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
            L D+N   +       S L   +    S+  +G    ++               +  + 
Sbjct: 176 KLKDVNHVGNGDLSVSKSTLETQTNALVSLDLDGVNYLEDHTITLDANFELDLDKQKYTF 235

Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS------AKKSRLS 273
            ++       + +   G +  NE        F       K     +             +
Sbjct: 236 -LENEAKINELPLTFNGFVQVNEDNNDIDITFKTPSSDFKNFLAIIPKTYSKNLDGVDTT 294

Query: 274 GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL-NETD 332
           G+F +  G ++           +      N       E        N      D+ NET 
Sbjct: 295 GDFIVD-GKIKGIVDDTHIPTLDIKIRSSN-ASFKYAELPK---RVNNITINADIKNETG 349

Query: 333 FFEEEEKKNKNDDLKKDDIQYSV 355
             E+      N   K D   ++ 
Sbjct: 350 IVEDTYINIGNLTFKIDQDVFAA 372


>gi|242279977|ref|YP_002992106.1| AsmA family protein [Desulfovibrio salexigens DSM 2638]
 gi|242122871|gb|ACS80567.1| AsmA family protein [Desulfovibrio salexigens DSM 2638]
          Length = 1081

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 95/290 (32%), Gaps = 20/290 (6%)

Query: 3   RRVLIGLGFLFSV-VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++   L  LF + +L        +++  + R   E   +  + +++     + +   P+
Sbjct: 9   KKLFWILFILFDLCILAAVVGGVFYLESDEPRIALENILSEKLEREVRFDENLDLIFYPW 68

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V    + +    D     +  ++G+  +   +PLLSG++ V  + +D P L+      
Sbjct: 69  LGVETGPLTVSAPVDSAYPHQLTVQGIDFKVRLIPLLSGDLEVDTIIVDSPSLHVDRLKD 128

Query: 120 GVSNWFQRKSTMDM---------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
           G  N     S               ++ +  + V        D+ S   + +S +N++  
Sbjct: 129 GSLNLPLLGSDDGAENDDVGIKYFDSISVRGLSVLNATCSYSDKGSGNSFTVSGVNVRTG 188

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                      + ++  + +       + K                 SL +++       
Sbjct: 189 LLRKGTPLAFDLSAMLDAALFNLKAQANLKGLLDFSVQEKQVSLSETSLSVKVESD---- 244

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280
             +L G     E                K L L+ +    RLSG+   +D
Sbjct: 245 --ELLGKGEVVEGIASLDFNLVEGMIDVKGLVLQGAG--VRLSGSANCTD 290


>gi|313201061|ref|YP_004039719.1| hypothetical protein MPQ_1320 [Methylovorus sp. MP688]
 gi|312440377|gb|ADQ84483.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 1305

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 57/380 (15%), Positives = 117/380 (30%), Gaps = 31/380 (8%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPS 63
            L    F  +V+ +    +P   +   +R D E +AT  +G+K+++ G IK       P 
Sbjct: 18  WLAIFAFAAAVLSMRYLVLP---NIDKYRADIEARATAAMGQKVSI-GEIKASWDGLNPH 73

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV-- 121
           +   ++ I   E       +  +     +L +   E R+  + I QP L     ++G   
Sbjct: 74  LSLYNVDIHDAE-ERPALSLGHVEASLSWLSIPLLEPRLSSIEIYQPELTIRRDAQGTLY 132

Query: 122 ---SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNII 177
                             +   +I V    +   D+        L+ LNL++ +     +
Sbjct: 133 VAGMAMGGPSRPQFANWALRQSRIDVLDASVIWEDELRKAPPLSLTQLNLRVVSPAWKGL 192

Query: 178 S--------PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
                     L        +   G     +       +    AK +   +      ++YP
Sbjct: 193 IGHHMFGLRALPSAGSSAPIDIRGNLYGKDISQPEDWSGTVYAKLEGTDISAWRKWISYP 252

Query: 230 III-DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNV 283
             + + +G   +  +         V+      +   LSA   +     LSG         
Sbjct: 253 FDLYEGYGAARFWLQLDDGKPSNIVSDVILSDVKTRLSASSPQATLNHLSGRLSWDKHK- 311

Query: 284 RISRYKLQSILPNSSTDEDNK-TKVSQDEENLLNFSENGAESMHD---LNETDFFEEEEK 339
               +  ++I  N+    D +   +S  E  + +          D   L+  + F     
Sbjct: 312 DGQEFTAENIKLNTPDGLDMQNGSISLRERWIKDKQWIEGRVRLDEILLDTLNTFAGYIP 371

Query: 340 KNKNDDLKKDDIQYSVNKKE 359
             KN      +I  +   + 
Sbjct: 372 LPKNLKQNLQEISPTGKLEN 391


>gi|167572069|ref|ZP_02364943.1| hypothetical protein BoklC_19674 [Burkholderia oklahomensis C6786]
          Length = 377

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 90/294 (30%), Gaps = 29/294 (9%)

Query: 3   RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R  IG+    +V  L+G F  P  I     R   E+Q +  + +   +    +I   P+
Sbjct: 25  KRTGIGVLIFLAVFGLLGFFAAPPLI-----RHVAEQQLSQQLDRPATIS---RIAFNPY 76

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + + ++        I  L +RA +  L      V ++ +DQP  +       
Sbjct: 77  TLRLEADGVHVGERGGQGDFVDIGKLVVRASWTSLARFAPIVDEVRLDQPRFHIVRYDAQ 136

Query: 121 VSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
             N+                      +  I V  GRI+  D+  +  + +   ++ I   
Sbjct: 137 RFNFTDLVDKFSKPSPQPSTKPARFSVSNIQVNDGRIEFDDRLLNAKHVVDQWSIGIPFI 196

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
                           V  +     D    A        A+++  S+ ++   L  P ++
Sbjct: 197 ATLPSKSDIF------VTPKLRARLDGSPIALDGKTKPFAQSRESSIDLKFDGLDVPRLL 250

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
                     +         +    +    +       R+SG   ++D  V   
Sbjct: 251 SYAPT-KLPVEVRSGKLSSDL----NVNFAMSGDTPALRVSGTVDLNDAQVTSP 299


>gi|226194713|ref|ZP_03790307.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
           9]
 gi|225933279|gb|EEH29272.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
           9]
          Length = 1323

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68
           G    + LV    +  F      R   E+Q +  + +   +    +I   P+   +    
Sbjct: 28  GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125
           +R+ ++        I  L +RA +  L      + ++ +DQP            N+    
Sbjct: 85  VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144

Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                             +  I V  GRI+  D+  +  + +    + I           
Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239
                   V  +     D    A        A+++  S+ ++   L  P ++      L 
Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
            + +    S    V         +       R+SG   ++D  V 
Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297


>gi|217423051|ref|ZP_03454553.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
 gi|217393959|gb|EEC33979.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
          Length = 1323

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68
           G    + LV    +  F      R   E+Q +  + +   +    +I   P+   +    
Sbjct: 28  GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125
           +R+ ++        I  L +RA +  L      + ++ +DQP            N+    
Sbjct: 85  VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144

Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                             +  I V  GRI+  D+  +  + +    + I           
Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239
                   V  +     D    A        A+++  S+ ++   L  P ++      L 
Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
            + +    S    V         +       R+SG   ++D  V 
Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297


>gi|126663144|ref|ZP_01734142.1| putative outer membrane protein [Flavobacteria bacterium BAL38]
 gi|126624802|gb|EAZ95492.1| putative outer membrane protein [Flavobacteria bacterium BAL38]
          Length = 869

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 54/390 (13%), Positives = 106/390 (27%), Gaps = 43/390 (11%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58
           ML++VL G G    V L+     P        +E   +     V   IA +  + + +  
Sbjct: 1   MLKKVLKGTGIFLLVTLIALAAAPFLF-KDKIKEMIAKTLNESVNANIAFE-DVDLSLFK 58

Query: 59  -LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE---IRVFDMYIDQPHL 112
             P  +V  + + I  K              ++      L  G+   + +    +    +
Sbjct: 59  SFPKANVTIEKLSIITKAPFENDTLLYAGETNVTMSIKELFKGDDEAMNLESFSVVDGIV 118

Query: 113 NFYLSSKGVSNW-------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
           N   +  G+ N+         +KS+      + ++   V+  +   +D+ S+    L  +
Sbjct: 119 NIIFNKDGIGNFDIAIKEEADKKSSESKPFALSIQNYEVENLKFSYVDESSNMKMVLDSI 178

Query: 166 NLQISARFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
                  F      L   +    S   E T    N   +         +      K    
Sbjct: 179 YHDGKGNFAAQKLDLETKTTAKLSFEMEKTNYMKNVGISLDAVLGIDLEKSKYEFK-DNK 237

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL------LNLELSAKKSRLSGNFKI 278
            L   + ++  G +   E    Y   F       K               K + +G F +
Sbjct: 238 ALINQLPLEFNGFIQMVEAGQTYDLTFKTPTSDFKNFLGLIPEAYSGDINKVKTTGQFTV 297

Query: 279 SDG------NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM-HDLNET 331
                       I  + ++    N+S                L  S        H +NET
Sbjct: 298 DGKVKGNLTETTIPAFDIKIASKNASFQ-----------YPNLPKSVKNIVIDTHIINET 346

Query: 332 DFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361
               +            D   ++     + 
Sbjct: 347 GVMNDTYVNLNQLSFSIDQDVFNAKATVKN 376


>gi|319943368|ref|ZP_08017650.1| AsmA family protein [Lautropia mirabilis ATCC 51599]
 gi|319743183|gb|EFV95588.1| AsmA family protein [Lautropia mirabilis ATCC 51599]
          Length = 779

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 51/360 (14%), Positives = 108/360 (30%), Gaps = 39/360 (10%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-DGSFESKIE 84
           F+D   F+            + ++ +G +K+ I P   V   ++R+ +        + + 
Sbjct: 25  FVDVNYFKPQIANFVATRYNRTLSFEGDLKLSIFPHVGVTLPEVRLSEPNQPEQEAASLT 84

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW--------------FQRKST 130
              +    LPLL G+++   + ID         + G  +                     
Sbjct: 85  SAQVSVALLPLLKGDVQADTVTIDGLKAKVVRQADGSMSIDDLLGAQDAPAQEQPAEPEA 144

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
              I    +  + +   R+   D+++ Q Y L  LN++       I +P+S+    G+  
Sbjct: 145 AAKIPAFHVNGVTLANARVVFDDRQAGQTYTLERLNVETGPLANVIETPVSLSLGFGATS 204

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250
            E  G+F                +    LKI L    Y +     G     +   +    
Sbjct: 205 PEARGDF----------------SMKGQLKIDLEQGRYGLRDFSAGLKGAIDTLQVQQFA 248

Query: 251 FSVAGDFSKLLNLELSAKKSRLS--GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308
             + G         +      L   G          ++  KL +I  + ++ +  + KVS
Sbjct: 249 LKLKGFSFDPQGPIIDLNDLALDAQGRMGADSFRGTVAAPKL-AIASDKASGDTVQAKVS 307

Query: 309 QDEENLLNFSEN-----GAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDN 363
             ++  L+         G      +N      +  +  +    K      +         
Sbjct: 308 LGDKEWLSAVLTLAGVGGTADDLKVNSLGLDAKLTQDGRTVAAKLATPVQASLAAGRYQL 367


>gi|221200695|ref|ZP_03573736.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
 gi|221179267|gb|EEE11673.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
          Length = 1264

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 97/334 (29%), Gaps = 42/334 (12%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65
           IGLG L  +VL G      F      R   E+Q +  + +   ++   +I + P+  ++ 
Sbjct: 28  IGLGILIFLVLFGLLG--FFAAPPLIRHIAEQQLSKQLDRPATIR---RIALNPYTLNLE 82

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
              I + +         I  L +R  +  L  G   V ++ +D P            N+ 
Sbjct: 83  ADSIHVGEHGGQGDFIDIAKLVVRPSWTSLFRGAPIVNEIRLDSPRFRIVRYDAQRFNFT 142

Query: 126 Q-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                               +  I +  GRI   D+  ++ + + +  L +         
Sbjct: 143 DLIEKFSTPSKPDSKPTLFSVSNIQINNGRIDFDDRLLNEKHVVDEWTLGVP------YI 196

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID----- 233
                     V  +    FD    A        A+++   + ++   L  P +I      
Sbjct: 197 ATLPSKTDIFVEPKLRMRFDGSPIAIDGKTKPFAQSRESEIALKFDRLDVPKLISYVPAK 256

Query: 234 LFGNLFWNEKQPIYSGVFSVAG----------DFSKLLNLELSAKKSRLSGN-------- 275
           L   +         S  F ++G                 +   A +   +          
Sbjct: 257 LPVAVTSGLLSSDLSVNFVMSGDTPALRVSGTVDLTDAKVTGPASEPLFAARGVHVAAAG 316

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
            +     +     +L   + + S D+     V +
Sbjct: 317 LEPLRNAMHFDEIRLDRPVIDLSRDKQGVLNVEK 350



 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/357 (12%), Positives = 97/357 (27%), Gaps = 61/357 (17%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +V   D ++             G+ + A  L  L   +   ++ +D+P ++     +GV 
Sbjct: 288 TVDLTDAKVTGPA-SEPLFAARGVHVAAAGLEPLRNAMHFDEIRLDRPVIDLSRDKQGVL 346

Query: 123 NWF------------------------------------QRKSTMDMIHNVILEKIHVKG 146
           N                                      Q   T     ++ +  + + G
Sbjct: 347 NVEKLAGSPAAAPKAASAAANGASRAAVAAASAPAASGAQAADTKTPPLDLTIRHVAIDG 406

Query: 147 GRIKIID--QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204
           G + + D    +     L+ L   +    L   +P    ++  S+   G           
Sbjct: 407 GTVNLDDRVPATPTALALTKLAATLDGFALQRKTPAKY-TLSTSLSRGGD---------L 456

Query: 205 KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA-GDFSKLLNL 263
           K         K +  K+ +  LA      L   L    +  +  G         +     
Sbjct: 457 KAEGTVDVAAKQVDTKLVVDALALAP---LQPYLGEATRARVLDGALGATINAKADWGKT 513

Query: 264 ELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
            L A+ +       +    +     K  +I+   +  +  K  V+     + +   +G  
Sbjct: 514 PLDAQVA--DSELSLKSLKLATPDAKAPAIVLPDARAKIAKVDVAARTAEIASVDAHGLA 571

Query: 324 SMHD------LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374
                     ++   F    +       + +     + +     D  + KE   NF+
Sbjct: 572 LDVKRLKNGNIDLAAFASPAQPAVPQRTVARKAQAAAPSWHYRIDALNVKEASANFT 628


>gi|189500157|ref|YP_001959627.1| hypothetical protein Cphamn1_1214 [Chlorobium phaeobacteroides BS1]
 gi|189495598|gb|ACE04146.1| hypothetical protein Cphamn1_1214 [Chlorobium phaeobacteroides BS1]
          Length = 928

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 63/402 (15%), Positives = 125/402 (31%), Gaps = 37/402 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI 58
           + + L     +  +V+   F V         +          +   +      G   I I
Sbjct: 1   MSKFLKYFLLILVLVMTSGFIVL-----QVLKPRLNGFIKQALNSAVDANVDYGDADISI 55

Query: 59  L---PFPSVFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113
               P  S+  KD+++           +  E  S+  +   + SGE+++  + +D+P ++
Sbjct: 56  FQAFPAVSLSCKDLQVLDKNVSGMDILATAEKFSVAFDPFSVFSGELKIASLRVDRPMIH 115

Query: 114 FYLSSKGVSNWFQRKSTMDMIH-------NVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
             + S G +NW                  N++     +K G I   D + +  + +   N
Sbjct: 116 IRIDSAGRNNWDVFPPADPSKSSQELSGLNLLFRDFKIKDGYIVFYDSKKNNSFLVQGFN 175

Query: 167 LQISARFLNIISPLSIDSIKGSV--IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
            ++  R     S L   S+  S+     G    D  R++F        +N+   LK    
Sbjct: 176 YEMKGRLGGRSSTLRTSSVMDSLSVTIGGMSLLDKTRASFTAEIAADLENRKFQLK-DNR 234

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA------------KKSRL 272
                + I L G +   +        F       K L   L                 R 
Sbjct: 235 LALNEMGIVLDGTVSLLDDAVNTDLDFRADNIELKELLSLLPVLYENNYKKLDARGGVRF 294

Query: 273 SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETD 332
           +G+ K      ++  ++L   + + S   +      + EE   + S        D     
Sbjct: 295 AGHVKGLYRKEQLPAFELALDVSDGSFGYEGVP--VRAEEISFSSSVTNPGGDADKTLLS 352

Query: 333 FFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374
             E   + N    + K D++  V+        +   N  +F 
Sbjct: 353 VPELTLRINGKPVVMKLDVKTPVSDPYIDAAINGSLNLSDFQ 394


>gi|254263750|ref|ZP_04954615.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
 gi|254214752|gb|EET04137.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
          Length = 1317

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68
           G    + LV    +  F      R   E+Q +  + +   +    +I   P+   +    
Sbjct: 28  GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125
           +R+ ++        I  L +RA +  L      + ++ +DQP            N+    
Sbjct: 85  VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144

Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                             +  I V  GRI+  D+  +  + +    + I           
Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239
                   V  +     D    A        A+++  S+ ++   L  P ++      L 
Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
            + +    S    V         +       R+SG   ++D  V 
Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297


>gi|53721262|ref|YP_110247.1| hypothetical protein BPSS0227 [Burkholderia pseudomallei K96243]
 gi|52211676|emb|CAH37672.1| putative membrane protein [Burkholderia pseudomallei K96243]
          Length = 1319

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68
           G    + LV    +  F      R   E+Q +  + +   +    +I   P+   +    
Sbjct: 28  GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125
           +R+ ++        I  L +RA +  L      + ++ +DQP            N+    
Sbjct: 85  VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144

Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                             +  I V  GRI+  D+  +  + +    + I           
Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239
                   V  +     D    A        A+++  S+ ++   L  P ++      L 
Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
            + +    S    V         +       R+SG   ++D  V 
Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297


>gi|126458398|ref|YP_001074364.1| hypothetical protein BURPS1106A_A0321 [Burkholderia pseudomallei
           1106a]
 gi|242311828|ref|ZP_04810845.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
 gi|126232166|gb|ABN95579.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
 gi|242135067|gb|EES21470.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
          Length = 1318

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 25/285 (8%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68
           G    + LV    +  F      R   E+Q +  + +   +    +I   P+   +    
Sbjct: 28  GIGALIFLVAFGLLGFFAAPPLIRHVAEQQLSQQLERPATIA---RIAFNPYTLRLEADG 84

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--- 125
           +R+ ++        I  L +RA +  L      + ++ +DQP            N+    
Sbjct: 85  VRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTDLV 144

Query: 126 -----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                             +  I V  GRI+  D+  +  + +    + I           
Sbjct: 145 DKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSKTD 204

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LF 239
                   V  +     D    A        A+++  S+ ++   L  P ++      L 
Sbjct: 205 IF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTKLP 258

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
            + +    S    V         +       R+SG   ++D  V 
Sbjct: 259 VDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297


>gi|187927862|ref|YP_001898349.1| hypothetical protein Rpic_0766 [Ralstonia pickettii 12J]
 gi|187724752|gb|ACD25917.1| protein of unknown function DUF748 [Ralstonia pickettii 12J]
          Length = 1260

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/338 (12%), Positives = 106/338 (31%), Gaps = 39/338 (11%)

Query: 3   RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R+ IG+     +  L+GAF  P            + Q + ++ + ++V    KI I P+
Sbjct: 44  KRIGIGVLIFLVMFGLLGAFGGPPL-----LHHLAQTQLSQLLERPVSVG---KISINPY 95

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I +++  +    +  L + A +  +      + ++ ID PH+    +++ 
Sbjct: 96  TLRLDVDQLHIAERDGKTPFVDVGHLHVNASWSSIFRRAPVIEELSIDAPHVRIVRTAEQ 155

Query: 121 VSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
             N+              K   +     +   + +  G I  +DQ     + +  L + +
Sbjct: 156 RFNFSDIVDKLSQPETAPKPKSNEPARFVFANLQLTNGAIDFVDQPLGGQHKVEGLQIGV 215

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
                    P  +D     ++       D     F       A +   +L +++  L  P
Sbjct: 216 PFV---ASLPADVDIFVQPLLV---ARIDGAPLHFAGKTKPFADSLESNLNVKIDGLDLP 269

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
             +   G +       +  G  +           +      R+ G   + +  V      
Sbjct: 270 RYL---GYVPGPLPVAVPQGKLTTD-LTIDFQKPKSGTPVLRVHGTTGLDNLEV------ 319

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
                  +      + + +  +   L+   +      D
Sbjct: 320 --VDARKAPLVAAKQVRATLADVRPLDNVFHLDALTLD 355


>gi|197116923|ref|YP_002137350.1| hypothetical protein Gbem_0525 [Geobacter bemidjiensis Bem]
 gi|197086283|gb|ACH37554.1| DUF748 repeat protein [Geobacter bemidjiensis Bem]
          Length = 1210

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 99/306 (32%), Gaps = 31/306 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61
           + +LI    + S+++     +P+ +     R           G+++ +     + I PF 
Sbjct: 6   KYILISAAIVTSIIVFVTALLPIIV-----RNKTVSTLKEATGREVHLS---SVSINPFT 57

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            +V   D  I +K                    +    + + ++ +D P ++   ++   
Sbjct: 58  LTVTVNDFAIAEKTG-PPLVAFRKAKASLALASVYKRALILSEIVLDTPSVSLVRTAPNR 116

Query: 122 SNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLNLQIS- 170
            N+          +           L  I VK G I+  D+     + + + DL + I  
Sbjct: 117 FNFSDIIDRQPKGKAPEQGKPFLFSLNNISVKNGSIEFDDRMTAGGRKHTVRDLQITIPF 176

Query: 171 ----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
                   +      + ++        TG       + + + +   K   +   +   P+
Sbjct: 177 ISNIPYLADRYVDPRLAAVVNGAPFNFTGKLKPLSKSLETSVHIGLKGLNLPQYLAYAPV 236

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
             P+ +   G L  +         + V+ D    L L+  A  + +  N       +R+ 
Sbjct: 237 PPPVDLT-SGRLTLD-----MDLAYRVSADKKPELILKGGAGLAEVRVNLLDGKPLLRLP 290

Query: 287 RYKLQS 292
             +L++
Sbjct: 291 SLELKA 296


>gi|330961858|gb|EGH62118.1| AsmA family protein [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 691

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/274 (12%), Positives = 82/274 (29%), Gaps = 39/274 (14%)

Query: 47  KIAVKGGIKIHILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDM 105
           ++ + G I   + P+  +   D  +          + ++ L +    LPLL  ++++ D+
Sbjct: 1   ELTLNGDIGWSLFPWLGLELHDTHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDI 60

Query: 106 YIDQPHLNFYLSSKGVSNWFQ-----------------------RKSTMDMIHNVILEKI 142
            ++  +L  +    G  NW                         +         + ++ +
Sbjct: 61  RVEGLNLTLHRDENGHGNWEDIGKPAVSSTGTPETTPPPSPEAPKPDRPSQPLRLDIDSL 120

Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGT 194
            V   R+   D    + +    + L           P+ + +        ++      G 
Sbjct: 121 TVNNARVDYSDARKGRTFMAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGQ 180

Query: 195 GNFDNKRSAFKI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
              D     ++      +     + +  K   F     +++DL  N+         +   
Sbjct: 181 LRMDRVLKRYQFEDMRLSGEIAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKFSANQL 240

Query: 252 SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
              G     L      K  ++SG   I+  ++R 
Sbjct: 241 RALG----ELRARDLDKTPQISGGLSIAQLDLRT 270


>gi|187251749|ref|YP_001876231.1| hypothetical protein Emin_1344 [Elusimicrobium minutum Pei191]
 gi|186971909|gb|ACC98894.1| Uncharacterized protein involved in outer membrane biogenesis
           [Elusimicrobium minutum Pei191]
          Length = 776

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 57/404 (14%), Positives = 133/404 (32%), Gaps = 46/404 (11%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +   + F+  +  +G      + +  D  +    Q    + + + + G +++     
Sbjct: 38  IKTLTFFMLFMVFLAALGWAMFIKYFNAQDVSQLIADQMQSALARPVVI-GSLELQFFNS 96

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             +    I   +  +     + E +S+R     +L  EI + ++ +  P +    +  G 
Sbjct: 97  AKIKKMLILDTEIPNAPPLLEAEEVSLRYNIWDILKKEIHIEEVTLKNPKIIISKNEDGS 156

Query: 122 SNWF-------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
            N                  +  +    V ++   +  G   + D   + V+ L D++++
Sbjct: 157 LNMPVIDISSARQIVSKTPGTNKEESFKVRIDDWKIVNGTFMLRDDFKNTVHALYDVDME 216

Query: 169 ISARFLNIISPLSIDSI----------KGSVIAEGTGNFDN---KRSAFK-ITANFPAKN 214
                 N  S      +          + +V A G+ NF N    R   +         +
Sbjct: 217 FRNLNFNAPSNFKTGFLMRNVWQDKMIEVAVKAGGSVNFSNFDWSRFNLRNTNVELAFFD 276

Query: 215 KAISLKIQLFPL---------AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF-SKLLNLE 264
           K I +++ +  +           P + D   +LF N+   I      ++ +   K     
Sbjct: 277 KPIKIRLDVDNVYTPFLSFTADIPPLTDADLSLFLNKPLNINFPQMKISANTVLKRSYHH 336

Query: 265 LSAKKSRL-SGNFKIS-DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA 322
            S  K +L SG+ K    GN+ + R +    +       + K  +        N   NGA
Sbjct: 337 FSVNKLQLTSGDIKADASGNLYLDRLEGDFNVKTDFFKMEGKETI-YAGIKKFNLKGNGA 395

Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHD 366
                +N    F++++      ++   +    +       N  D
Sbjct: 396 -----VNLKGVFKDKKVTFPEVEVSVKNAAAKIGNYNGGWNISD 434


>gi|4185552|gb|AAD09124.1| AsmA [Rhodobacter sphaeroides]
          Length = 150

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 47/131 (35%), Gaps = 3/131 (2%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R ++     LF +         + +      E   R+     G+ + + G ++  I P 
Sbjct: 1   MRWLVRLAAVLFGLA-ALFLVALVLMPRERVAELAAREFEAATGRDLTISGDVRPSIWPR 59

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V    + +            +   L +  + L L+SG  R+  + +++P +     ++
Sbjct: 60  LGVRTGPVTVANAPWTDEGPMLEARSLEIGLDTLALMSGAWRISRIALEEPVIRLERDAE 119

Query: 120 GVSNWFQRKST 130
           G +NW      
Sbjct: 120 GRANWDLSSPP 130


>gi|187477068|ref|YP_785092.1| hypothetical protein BAV0559 [Bordetella avium 197N]
 gi|115421654|emb|CAJ48164.1| putative exported protein [Bordetella avium 197N]
          Length = 826

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 46/411 (11%), Positives = 112/411 (27%), Gaps = 54/411 (13%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81
              L  D   ++   E        + + ++G I++ + P   +  + + + +       +
Sbjct: 25  IFLLTFDPNAYKYKLEELVQERYHRTLTIEGEIELSLFPRIGLAVQGVSLSEANSPEVFA 84

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------------- 124
            I+ + +     PLLS  + V  + I+           G  N+                 
Sbjct: 85  SIDSMRLAVAVWPLLSNNLVVDHVTINGFKARIAREKSGQFNFENLVGGVEPSTAVPANA 144

Query: 125 ---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
                               +      + +  + +K G +++ D  S     ++ LN   
Sbjct: 145 AEATVGAIAGAAQALSSGTVSAPRSMQIDIAGLDLKDGELQLQDALSGMAVSVTHLNANT 204

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-PLAY 228
                N    +S ++               +       +      + + L+++   P A 
Sbjct: 205 GRVTFNQPFDVSFNARVEGGDPRFDAGLTGQALLRLDPSAKRYSAQRLDLRMEGKLPSAQ 264

Query: 229 PIIIDLFGNLFWNEKQPIYS-------GVFSVAGDFSKLLNLELSAKKSRLS-----GNF 276
              + + GNL +N                  V    ++L  +E S    +LS        
Sbjct: 265 AKSLAVRGNLAFNGASSSLDVAGLEVVFQGDVTHPAARLTGVEASVAMPKLSVDPHKAQL 324

Query: 277 KISDGNVRIS--------RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328
           +I     R           + L +   + S                 +   + + +    
Sbjct: 325 QIDKLAARAKGNSPEGPFEFALDTPSLHISPTSAG-GDALTGRIRNPSLDASFSLTGISG 383

Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
           N  +   +E K +      +  ++         + +    +     GD  I
Sbjct: 384 NAAELDIKEAKIDAAVKQGERVVKTVFASPVSLNLTQRAGSLAALKGDVNI 434


>gi|146343725|ref|YP_001208773.1| putative AsmA-like protein [Bradyrhizobium sp. ORS278]
 gi|146196531|emb|CAL80558.1| putative AsmA-like protein [Bradyrhizobium sp. ORS278]
          Length = 699

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 97/281 (34%), Gaps = 12/281 (4%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ + I  G L +V++V A  +   +  +      + +     G ++++ GG  + + P 
Sbjct: 1   MKALKIAGGLLGAVIVVLALALAFGLPASFLTVAIQDRVERDTGYRLSIAGGATVSLWPS 60

Query: 62  PSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V   DI +   +  DG+    +  L        L SG   + ++ I++P L   L  +
Sbjct: 61  LQVTLTDITLQDPKDRDGNNRLTVSRLQADMALSSLWSGRPDISEISIEKPTLYLPLLRE 120

Query: 120 GVSNWFQRKS---TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
            + +   R       + +  V +  + V  G + + +        L  L+   S     I
Sbjct: 121 RLRDNAPRSRSSAKPESVPAVRIASVTVTDGAVILSNPRDRVENRLEGLSATGSLSGDKI 180

Query: 177 ISPLSIDSIKGSVIAEGTGN-----FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
               S  +    V  E          D +           +  + + L  +        +
Sbjct: 181 KIKGSARAGDRPVTFEINAAAPAMPIDRQTLPVDFRIGMESAFRGV-LAGRADVRLNGAL 239

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
           I + G L        ++G  SV      L+ ++L  ++  L
Sbjct: 240 IMING-LSGTLGDGDFNGWASVDLASKPLVKIDLDVRRLDL 279


>gi|83716151|ref|YP_440353.1| hypothetical protein BTH_II2165 [Burkholderia thailandensis E264]
 gi|83649976|gb|ABC34040.1| Domain of Unknown Function (DUF748) family [Burkholderia
           thailandensis E264]
          Length = 1382

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 45/286 (15%), Positives = 85/286 (29%), Gaps = 25/286 (8%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66
           G+G L  +V+ G      F      R   E+Q +  + +   +    +I   P+   +  
Sbjct: 100 GIGVLIFLVVFGLLG--FFAAPPLIRHVAEQQLSRQLERPATIA---RIAFNPYTLRLEA 154

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125
             + + ++        I  L +RA +  L      V ++ +DQP            N+  
Sbjct: 155 DGVHVGERGGQGDFVDIGKLVVRASWTSLARFAPIVDEVRLDQPRFRIVRYDAQRLNFTD 214

Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                               +  I V  GRI   D+  +  + +    L I         
Sbjct: 215 LVDKFSKPSPQPSAKPVRFSVSNIQVNDGRIDFDDRLLNAKHVVDQWTLGIPFIATLPSK 274

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
                     V  +     D    A        A+++  S+ ++L  L  P ++      
Sbjct: 275 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKLGGLDVPRLLS---YA 325

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                  + SG  S +                R+SG   ++D  V 
Sbjct: 326 PTRLPVDVRSGKLS-SNLDVNFAMA-GDTPSLRVSGTVDLNDAQVT 369


>gi|254461642|ref|ZP_05075058.1| AsmA [Rhodobacterales bacterium HTCC2083]
 gi|206678231|gb|EDZ42718.1| AsmA [Rhodobacteraceae bacterium HTCC2083]
          Length = 926

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/339 (11%), Positives = 92/339 (27%), Gaps = 23/339 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           R LI L  +  V +  A    L +           Q +   G+ + +     I++ P   
Sbjct: 2   RFLIRLIVIVLVAVAIAIVGLLMLPGEKIARIAADQLSKQTGRAVDISSETSINLYPTLG 61

Query: 64  VFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           V      I   +          + L++  +   L+ G IR+  +    P +    ++ G+
Sbjct: 62  VTTGPASIASADWAKNGPLMTADSLAIGIDVPALIGGTIRITKLEAKSPRIVLERAADGL 121

Query: 122 SNWFQRKST-------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
           +NW    S               D  +++ LE+  +    ++ ID  +     L ++++ 
Sbjct: 122 TNWDLLPSREPVETTEPVNETTEDQSYDLSLERALITDAGLRYIDHGTGTDQDLKNVDID 181

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
           +    L   + L +     +          +      I  +      A++          
Sbjct: 182 LRWPSLGGPAELILGITPFTERLNLNTTVGDVMGL--IGGSQTTVIGALNAAGADLSFEG 239

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFS-KLLNLELSAKKSRLSGNFKISDGNVRISR 287
              I     +      P    +    G               + ++         + +  
Sbjct: 240 IASIKPEAAMQLTGSIPNVGALMRALGQDPATFGLAPNFNPSADINSQVNFDGTRLALRE 299

Query: 288 YKLQSILPNSSTDEDNKTKVSQD-EENLLNFSENGAESM 325
             L      +++       V        +    N     
Sbjct: 300 MAL----ALNTSTVSGDADVVLALGSPQVTAKLNADIKN 334


>gi|126665719|ref|ZP_01736700.1| hypothetical protein MELB17_04102 [Marinobacter sp. ELB17]
 gi|126629653|gb|EBA00270.1| hypothetical protein MELB17_04102 [Marinobacter sp. ELB17]
          Length = 724

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 94/289 (32%), Gaps = 36/289 (12%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGL 86
           ID   ++   E+         + + G I    +P   +   ++    K DG     +E L
Sbjct: 29  IDPNTYKPQIEQAVEKQTNLDLILDGDISWSFIP-IGLELNNVE--AKLDGERFIALERL 85

Query: 87  SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------------------- 125
               +F  LL+   +V +  +D    +  ++ KG +NW                      
Sbjct: 86  VAEIDFWSLLAMSPQVNNFVLDGLDAHLSVNKKGEANWTRIMPEKDAQQAASSEPAPDAT 145

Query: 126 ---QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                  +     N  +  + +   R+   D  + Q   L D  L  S   L    PL I
Sbjct: 146 ASETASESSSEPLNFNVSNVEIANARVHYTDATTGQEITLEDFTLGASNITLGSEFPLDI 205

Query: 183 DSIKGSVIAEGT------GNFDNKRSAFKITANFPAKNKAISLKI-QLFPLAYPIIIDLF 235
                +   + +            ++    +A+    +  I         +   I   L 
Sbjct: 206 SFRVDTAEPKMSVTGSIAARLSANQALDAFSASGLDASFDIGGDAFAGKTVTAKISGSLA 265

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKL-LNLELSAKKSRLSGNFKISDGNV 283
            NL  N+   +    FS A   +   LN+E    K +L+GN  I++ ++
Sbjct: 266 ANLA-NKTAKLKDIGFSFANLSANTNLNVEGFGDKPKLAGNIAINEFSL 313


>gi|289672234|ref|ZP_06493124.1| AsmA family protein [Pseudomonas syringae pv. syringae FF5]
          Length = 688

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 40/381 (10%), Positives = 100/381 (26%), Gaps = 73/381 (19%)

Query: 51  KGGIKIHILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
            G I   + P+  +   D  +          + ++ L +    LPLL  ++++ D+ ++ 
Sbjct: 1   NGDIGWSLFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEG 60

Query: 110 PHLNFYLSSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVK 145
            +L  +    G  NW                          +         + ++ + V 
Sbjct: 61  LNLTLHRDENGHGNWEDIGKPVVASTEAPGETTPAPAPDAPKADRPSQPIRLDIDSLTVN 120

Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNF 197
             R+   D    + +    + L           P+ + +        ++      G    
Sbjct: 121 NARVDYSDARKGRTFMAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGALRM 180

Query: 198 DNKRSAFKI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ---------- 244
           D     ++      +     + +  K   F     +++DL  N+                
Sbjct: 181 DRVLKRYQFEDMRLSGEVAGEPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRAL 240

Query: 245 -----------PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNV 283
                      P  SG  S+A    +     +      +S               +  ++
Sbjct: 241 GELRARDLDKTPQISGGLSIAQLDLRAFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSL 300

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKN 341
            +    L+       +    +  V    +  L     G     D       EE +  K  
Sbjct: 301 ALENLNLKV----DDSTFTGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAA 356

Query: 342 KNDDLKKDDIQYSVNKKEEKD 362
           +  +++  +   +       +
Sbjct: 357 RKSEVQSGEAAAAAGDSPLPE 377


>gi|89076130|ref|ZP_01162488.1| hypothetical protein SKA34_09148 [Photobacterium sp. SKA34]
 gi|89048140|gb|EAR53724.1| hypothetical protein SKA34_09148 [Photobacterium sp. SKA34]
          Length = 1322

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 46/387 (11%), Positives = 118/387 (30%), Gaps = 19/387 (4%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLF---IDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58
           L++V           ++ A  V  +   ID  D R D  +  +  + ++  + G + + +
Sbjct: 33  LKQVAKWTSIAILTPIIAATGVLAYGVKIDLADHRHDINQWLSSTLDRETTIGGDMSLTL 92

Query: 59  LPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
              P +   D+ +   E        K   +  +   LPLLS  +++  + +    L+   
Sbjct: 93  SFSPEIELSDVTVANTEAMKWEPMLKSGYIGAKISVLPLLSHTLKIDYLDLKDISLHLSK 152

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
            ++G +NW   +   +       E       ++ + +    +   +  L+   + ++ N+
Sbjct: 153 DNQGKANWVFAEQASEKPK----ETTQSTPFKLALSNNIRAEKVSVDYLDQH-TGQYANV 207

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
                  +     + +  GN         +  +  +       K+          +++  
Sbjct: 208 YLDQLALTKPDKWLLQAKGNAMGNEYDVSLAGDLESLINEQQGKLDATGSFAGAKLNIDA 267

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELS-----AKKSRLSGNFKISDGNVRISRYKLQ 291
           ++              +    +  L   L      A    L+     S   + ++   L 
Sbjct: 268 DIHPFHSSTPSKANVKLDWVDTAQLESLLDIDLRHAAPMSLTTQITASSKGISLADIALT 327

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
           S + ++    D     +  + N +N   N            + + +              
Sbjct: 328 SPITSAKGFLDISLAQNAKDLNHINGKLNIPLIDL----RPWLQPQPPVMYGVGYAAAAP 383

Query: 352 QYSVNKKEEKDNSHDKENQENFSGDKM 378
           Q S  +K         E   + S D++
Sbjct: 384 QQSPLQKALDQWLVKTETHLDLSVDEI 410


>gi|297568041|ref|YP_003689385.1| AsmA family protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296923956|gb|ADH84766.1| AsmA family protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 992

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 60/206 (29%), Gaps = 19/206 (9%)

Query: 18  VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG 77
           VG       ID     +   +      G+ ++++G  +  + P   +    + +      
Sbjct: 20  VGLVAAVHLIDINRHHDRIAQVVYDQTGRTLSIEGDFEWGLWPELYLKGGPLSLGNAPGF 79

Query: 78  S--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-------- 127
                  +E         PL   E+ +  + +    LN   + +G+ NW           
Sbjct: 80  DREPFFHLESFHFSVTTWPLRRSEVHLQTLQVAGLQLNLERNQEGIGNWEDLAAEPDPAP 139

Query: 128 ---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                             + L  I +    +   DQ S Q   +SDL L + A       
Sbjct: 140 AARPHKKKDPGAGLPFAALALGGIQIDRVNVNWYDQASGQQAHISDLRLTVGALQFGEPM 199

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAF 204
            L ++    S   E     + + +  
Sbjct: 200 QLELEFTAASNQPELEVAANAQATLL 225


>gi|90578314|ref|ZP_01234125.1| hypothetical protein VAS14_14724 [Vibrio angustum S14]
 gi|90441400|gb|EAS66580.1| hypothetical protein VAS14_14724 [Vibrio angustum S14]
          Length = 1318

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 48/381 (12%), Positives = 117/381 (30%), Gaps = 21/381 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLF---IDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58
           L++V           ++ A  V  +   ID  D R D  +  +  + ++  + G + + +
Sbjct: 29  LKQVAKWTSIAILTPIIAATGVLAYGVKIDLADHRHDINQWLSSTLDRETTIGGDMSLTL 88

Query: 59  LPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
              P +   D+ +   E        K   +  +   LPLLS  +++  + +    L+   
Sbjct: 89  SFSPEIELSDVTVANTEEMKWEPMLKSGYIGAKISVLPLLSHTLKIDYLDLKDISLHLSK 148

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
            ++G +NW   +   +       E       ++ + +    +   +  L+   + ++ N+
Sbjct: 149 DNQGKANWVFAEQASEKPK----EATQSTPFKLALSNNIRAEKVSVDYLDQH-TGQYANV 203

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
                  +     + +  GN         +  +  +       K+          +++  
Sbjct: 204 YLDQLALTKPDKWLLQAKGNAMGNEYDVSLAGDLESLINEQQGKLDATGSFAGAKLNIDA 263

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELS-----AKKSRLSGNFKISDGNVRISRYKLQ 291
           ++              +    +  L   L      A    L+     S   + ++   L 
Sbjct: 264 DIHPFHSNTPSKANVKLDWVDTAQLESLLDIDLRHAAPMSLTTQITASSKGISLADIALT 323

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD--LNETD----FFEEEEKKNKNDD 345
           S + ++    D     +  + N +N   N         L                 +   
Sbjct: 324 SPITSAKGFLDISLAQNAKDLNHINGKLNIPLIDLRPWLQPQPPVMLGVGYAAAAPQKSP 383

Query: 346 LKKDDIQYSVNKKEEKDNSHD 366
           L+K   Q+ V  +   D S D
Sbjct: 384 LQKALDQWLVKTETHLDLSVD 404


>gi|33598218|ref|NP_885861.1| hypothetical protein BPP3706 [Bordetella parapertussis 12822]
 gi|33566776|emb|CAE38989.1| exported protein, conserved [Bordetella parapertussis]
          Length = 736

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 51/153 (33%), Gaps = 16/153 (10%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIH------------ILPFPSVFFKDIRIDQ 73
            +DW   +     QA+  +G+  A++G + +              +P+P     D+ I  
Sbjct: 28  TLDWNRLKPTINEQASAALGRPFAIQGDLSVQWAREPGQGGWRGWVPWPHFVVHDVAIVN 87

Query: 74  KEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--RKS 129
                      +     R   LPLL   + +  + +     +    + GV+NW      +
Sbjct: 88  TVWARDPNLLTLRRGEFRLAPLPLLRQRVVIRRIQLSGLRADLQRRADGVANWEFTMPDT 147

Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
                  V ++ I    G I+  D  +     +
Sbjct: 148 GEPSPWKVDIDAIGFDQGAIRYADAIAQADLDV 180


>gi|118579201|ref|YP_900451.1| AsmA family protein [Pelobacter propionicus DSM 2379]
 gi|118501911|gb|ABK98393.1| AsmA family protein [Pelobacter propionicus DSM 2379]
          Length = 1070

 Score =   99 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 51/347 (14%), Positives = 102/347 (29%), Gaps = 28/347 (8%)

Query: 1   MLRRVLI-----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55
           ML+R+ I      L FL S ++  A  +P  ID   +R+D        + + ++  G   
Sbjct: 1   MLKRLHIRLPALLLLFLVSGLIGLALFLPRLIDVNAYRDDIITSLRQELNRDVSF-GRGT 59

Query: 56  IHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
             +   P+  F D+ + +K  G    +   +S+    LPLL   I +  + ++   L   
Sbjct: 60  FSMKFGPTFTFDDLSVREKGGGD-FLRATRVSVHLALLPLLEKRIVLRTVVVEGADLRLE 118

Query: 116 LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ----------VYFLSDL 165
             + G  N           + + L K+ V GG ++  D+   +             LS +
Sbjct: 119 RDAAGRLNIDDLLVPRPGAYKLQLRKVQVNGGVLRWRDRSVAKDGFQAEARISTLLLSGI 178

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK-------ITANFPAKNKAIS 218
                       S L++    G +   G+    +                      +   
Sbjct: 179 RPGKRGTVKLECSLLALSGAPGQISLSGSVRLPDSGRPLSTLELDMDAHIRRFDAGRFWP 238

Query: 219 LKIQLFP-LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL-SGNF 276
                 P       +D+  +     +Q    G   +AG       +       RL    +
Sbjct: 239 YYGSHIPFGPTGGRLDISTSFKGTPRQFSARGTLRLAGVSVNWPTVFHHPVNPRLAQLQY 298

Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
           ++      I    L               ++          +   + 
Sbjct: 299 ELKREKNVIDMPLLHF--SADGFTVRGSCRIQDVNGPDPRITARASS 343


>gi|67639111|ref|ZP_00438013.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
 gi|238519656|gb|EEP83125.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
          Length = 539

 Score =   99 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 86/287 (29%), Gaps = 27/287 (9%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66
           G+G L  +V  G      F      R   E+Q +  + +   +    +I   P+   +  
Sbjct: 28  GVGALIVLVAFGLLG--FFAAPPLIRHIAEQQLSQQLERPATIA---RIAFNPYTLRLEA 82

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125
             +R+ ++        I  L +RA +  L      + ++ +DQP            N+  
Sbjct: 83  DGVRVGERGGQGAFVDIGKLVVRASWTSLARFAPIIDEVRLDQPRFRIVRYDAQRFNFTD 142

Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                               +  I V  GRI+  D+  +  + +    + I         
Sbjct: 143 LVDKFSKPSPQPSAKPARFSVSNIQVNDGRIEFDDRLLNARHVVDQWTVGIPFIATLPSK 202

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237
                     V  +     D    A        A+++  S+ ++   L  P ++      
Sbjct: 203 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDVPRLLSYAPTK 256

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
           L  + +    S    V         +       R+SG   ++D  V 
Sbjct: 257 LPVDVRSGRLSSNLDV------NFAMAGDTPSLRVSGTLDLNDAQVT 297


>gi|118592445|ref|ZP_01549837.1| AsmA [Stappia aggregata IAM 12614]
 gi|118435103|gb|EAV41752.1| AsmA [Stappia aggregata IAM 12614]
          Length = 958

 Score =   99 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 45/328 (13%), Positives = 111/328 (33%), Gaps = 45/328 (13%)

Query: 15  VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74
           ++      VPLF+   + +     Q     G ++ + G + + + P  S+  +DI +  +
Sbjct: 3   LLATIILVVPLFLPKDEIKRQVVEQVDKRFGWRVRLDGPVSLSLFPGFSLVAEDIGLAGE 62

Query: 75  EDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMD 132
                   ++ E +     +  L+SG I+V  + +D+P +   +   G ++W  R+   D
Sbjct: 63  AGADGIEFARAERVEFGLAWGGLVSGNIQVTGIALDKPDIYLEIGPNGTTSWEPRRDISD 122

Query: 133 ---------------------------------------MIHNVILEKIHVKGGRIKIID 153
                                                   + ++ ++ + + GG +    
Sbjct: 123 IGDLIEAETGAAETDAVAEAAPAPASEAEPDETAAAPDGYLKSIGVDSLQITGGTVTYKA 182

Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213
            ++ +   +S+L+L + A  L+    L+       +    TG+  +           P  
Sbjct: 183 PDAAEPIRISNLDLSLQAPSLSGEVDLTSSFTFREMPVAVTGSLTD-PLGLMGGEQVPVD 241

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL--LNLELSAKKSR 271
            K  S +  +       +  +   L      P    + ++AG           +SAK + 
Sbjct: 242 LKISSGENSVSVTGQSGLDPVRAELALTAAGPSLKALAALAGQDLAADPGAFAVSAKVAG 301

Query: 272 LSGNFKISDGNVRISRYKLQSILPNSST 299
                 ++D ++ + +  L     ++  
Sbjct: 302 TEAMLSLADLDITLGQLSL-GGAADADL 328


>gi|134292377|ref|YP_001116113.1| hypothetical protein Bcep1808_3663 [Burkholderia vietnamiensis G4]
 gi|134135534|gb|ABO56648.1| protein of unknown function DUF748 [Burkholderia vietnamiensis G4]
          Length = 1292

 Score =   99 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 50/291 (17%), Positives = 97/291 (33%), Gaps = 28/291 (9%)

Query: 3   RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           RR+ IG+     V  L+G F  P  I     R   E+Q +  + +   ++   +I + P+
Sbjct: 26  RRIGIGVLIFVIVFGLLGFFAAPPLI-----RHLAEQQLSKQLDRPSTIR---RIALNPY 77

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             ++    + I ++        I  L +R  +  LL G   V ++ +D P  +       
Sbjct: 78  TLNLEADGVHIGERGGRGDFIDIGKLVVRPSWTSLLRGAPIVNELRVDSPRFHIVRYDAQ 137

Query: 121 VSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
             N+                     +  I V  GRI   D+  ++ + + +  L I    
Sbjct: 138 RLNFTDLIEKFSTPSQPASKPTLFSVSNIQVNDGRIDFDDRLLNERHVVDNWTLGIPFIA 197

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
                          V  +    FD    A        A+++   + +    L  P +I 
Sbjct: 198 TLPSKTDIF------VQPKLRARFDGSPIAIDGRTKPFAQSRESEVTLTFDRLDVPKLIS 251

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                       + SG+ S +    K + +       R++G   ++D  V 
Sbjct: 252 ---YAPTKLPVVVTSGLLS-SNLTLKFV-MSGDTPSLRVAGTVDLNDAKVT 297


>gi|218515007|ref|ZP_03511847.1| hypothetical protein Retl8_15599 [Rhizobium etli 8C-3]
          Length = 380

 Score =   99 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 60/142 (42%), Gaps = 1/142 (0%)

Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
            G    EG    D +   F I+++ P +   + ++ +L P  +P+ IDL G L   +++P
Sbjct: 1   AGPWRIEGDAALDGEHGKFSISSSQPDEKGVLHMRTKLSPDKHPVNIDLDGELKLVDRKP 60

Query: 246 IYSGVFSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
            Y G  S A    +   +   + +  R+ G F++++  +RI  Y+++    +       +
Sbjct: 61  NYQGQLSAAIEHRNSAKSANKNEQPPRVKGRFELTNERIRIPEYRMEIGPTDDPYVITGE 120

Query: 305 TKVSQDEENLLNFSENGAESMH 326
             +          + +G +   
Sbjct: 121 ATLDTGNAPEFLLTADGQQIDV 142


>gi|163758102|ref|ZP_02165190.1| hypothetical protein HPDFL43_00715 [Hoeflea phototrophica DFL-43]
 gi|162284391|gb|EDQ34674.1| hypothetical protein HPDFL43_00715 [Hoeflea phototrophica DFL-43]
          Length = 600

 Score =   99 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 90/296 (30%), Gaps = 25/296 (8%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK-- 74
           L  A +VPL +     R+  ER      G  +++     +   P P++   ++ I     
Sbjct: 2   LAIAVSVPLAVSSGVVRDRLERDIGGWAGHAVSLGDAPSLDFWPTPTIKLDNVVISPATF 61

Query: 75  EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134
            DG    + + +         ++G     +  + +P  N  L   G SNW   +  +   
Sbjct: 62  ADGDPILRADSIVANFNLFSAIAGAPSFTEFRLIRPTFNLELYPDGTSNWSSSQGQLAQG 121

Query: 135 HNVILEKIHVKG------GRIKIIDQESDQVYFLSDLNLQI-------SARFLNIISPLS 181
               L +   +           I D  +     + D  L+        + R   I   L+
Sbjct: 122 IESALARHQAEQAGEPIPASAIIPDSAALGTVTIEDGTLRWIRDPGAEAERLTAINGSLA 181

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFP-AKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
             +      A+ T  F  ++   K + + P       +  ++L   + P+ ++  G+   
Sbjct: 182 WTAPSAPARADITAIFRGEQMTLKGSTSAPLLFFGKNTAPVELQLSSPPLTLEFNGSASL 241

Query: 241 NEKQPIYSGVFSVAGDFSK--------LLNLELSAKKSRLSGNFKISDGNVRISRY 288
                  SG   +     +         +    +     L+          ++   
Sbjct: 242 -GPDLYGSGALRLFSPSVRRALEWSGADIKPGEALGALELTAQLSAEPTRAKLDDL 296


>gi|319794167|ref|YP_004155807.1| hypothetical protein Varpa_3512 [Variovorax paradoxus EPS]
 gi|315596630|gb|ADU37696.1| protein of unknown function DUF748 [Variovorax paradoxus EPS]
          Length = 1253

 Score = 99.6 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 45/368 (12%), Positives = 103/368 (27%), Gaps = 29/368 (7%)

Query: 15  VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74
           +VL+  + +         +   ++ A+  +G+++ V G I         +   D+RI   
Sbjct: 2   LVLLALWVIAWLAVPPVAKSQLQKIASEKLGRQVTV-GKIDFKPW-TLELALHDLRIATA 59

Query: 75  EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------- 125
           +    +  I+ +   AE   L      +  + I+ P +     + G  +           
Sbjct: 60  DGKQPQLAIKRIYADAELQSLFRLAPVIDAVSIESPAILLTHQADGKYDIDDILAKLASG 119

Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
                        +  I +K G +   DQ   + + L +  L +                
Sbjct: 120 PPPDPKAEPARFAIYNISIKDGAVDFDDQTVKRKHELRNFVLNVP------FLSNLASQR 173

Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PIIIDLFGNLFWNEKQ 244
           +     +     +             + ++     +Q   L   P +  + G L    + 
Sbjct: 174 EVKTEPKLAFVLNGSNFDSAAFTTPFSASRKTDAHVQFKGLDLVPYLGYIPGGLPVKLQA 233

Query: 245 PIYSGVFSVAGDFSKLLNLEL-------SAKKSRLSGN--FKISDGNVRISRYK-LQSIL 294
                   +    +    L++        AK S   G          + ++  + L+S+ 
Sbjct: 234 GSLDADLKIDFQQATTTGLKIYGTVEAHGAKLSDARGRDLLSFDSLKLALADVRPLESVF 293

Query: 295 PNSSTDEDN-KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353
             S     N +  V++D    LN       +                      +K  +  
Sbjct: 294 HLSEVALANPQLVVARDASGQLNLMATDPATDAAEKVAPLPVAPASAPAGQTAEKPKLNV 353

Query: 354 SVNKKEEK 361
            V+K    
Sbjct: 354 QVDKVALS 361



 Score = 56.8 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 79/280 (28%), Gaps = 29/280 (10%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +V     ++            + L +    +  L     + ++ +  P L     + G  
Sbjct: 257 TVEAHGAKLSDARGRD-LLSFDSLKLALADVRPLESVFHLSEVALANPQLVVARDASGQL 315

Query: 123 NWFQRKSTMDMIH-----------------------NVILEKIHVKGGRIKIIDQESDQV 159
           N        D                          NV ++K+ + GGRI   D+     
Sbjct: 316 NLMATDPATDAAEKVAPLPVAPASAPAGQTAEKPKLNVQVDKVALSGGRIGWRDETVKPA 375

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
             +   +L +    +            G+ IA  +  F    +              +SL
Sbjct: 376 AAVDLTDLGLDVTAITWPMEKPAQFNGGTAIAGASLKFKGSATDKVADVQTEVDALPLSL 435

Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
                  +    +D   +   +      +  F      +  L L  +       G F++ 
Sbjct: 436 AAPYLAQSLEPTLDGKLSGQIDIAWNQPNLKFKARRLAADGLALTQTKTALASVGRFELV 495

Query: 280 DGNVRISRYKLQSILPNSSTDEDN-KTKVSQDEENLLNFS 318
           D  V ++++ L      +S    N K +V +D E    F 
Sbjct: 496 DAEVDMTQHTLNI----ASFTATNPKVRVERDSEKRWMFE 531



 Score = 41.8 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/289 (9%), Positives = 70/289 (24%), Gaps = 50/289 (17%)

Query: 49  AVKGGIKIHIL-PFPSVFFKDIR---IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFD 104
            + G I I    P      + +    +   +  +  + +    +    + +    + +  
Sbjct: 451 KLSGQIDIAWNQPNLKFKARRLAADGLALTQTKTALASVGRFELVDAEVDMTQHTLNIAS 510

Query: 105 MYIDQPHLNFYLSSKGVSNW---------------------------FQRKSTMDMIHNV 137
                P +     S+    +                             +         +
Sbjct: 511 FTATNPKVRVERDSEKRWMFERWLRTPAGNGGAAEAKVAAPKPAGAGSAKADANTKPWAL 570

Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLS----DLNLQISARFLNIISPLSIDSIKGSVIAE- 192
            +  + V  G +   D+       +      LN Q  A   N +SPL +    GS  +E 
Sbjct: 571 TIATMAVDNGSLSYSDKAGALPVTVEVTAFKLNAQKIAPETNTVSPLQVSGRIGSGRSEP 630

Query: 193 GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS 252
           G  ++        + A    +  +          A  + +D+            Y+    
Sbjct: 631 GKFDYKGNVVLKPLAAEGRLEVISFPAHAFKAYYADALNVDIRRAFASYRGTVHYT---- 686

Query: 253 VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
                        +    +L+G+  + D                ++   
Sbjct: 687 ----------TTPAGMTVKLAGDTALDDFRANSVSLTQSPGFDRNTNQL 725


>gi|59801694|ref|YP_208406.1| hypothetical protein NGO1344 [Neisseria gonorrhoeae FA 1090]
 gi|240014592|ref|ZP_04721505.1| hypothetical protein NgonD_08084 [Neisseria gonorrhoeae DGI18]
 gi|240017037|ref|ZP_04723577.1| hypothetical protein NgonFA_07687 [Neisseria gonorrhoeae FA6140]
 gi|240081327|ref|ZP_04725870.1| hypothetical protein NgonF_08470 [Neisseria gonorrhoeae FA19]
 gi|240113536|ref|ZP_04728026.1| hypothetical protein NgonM_08211 [Neisseria gonorrhoeae MS11]
 gi|240118398|ref|ZP_04732460.1| hypothetical protein NgonPID_08033 [Neisseria gonorrhoeae PID1]
 gi|240121114|ref|ZP_04734076.1| hypothetical protein NgonPI_04954 [Neisseria gonorrhoeae PID24-1]
 gi|240123943|ref|ZP_04736899.1| hypothetical protein NgonP_08379 [Neisseria gonorrhoeae PID332]
 gi|240126143|ref|ZP_04739029.1| hypothetical protein NgonSK_07994 [Neisseria gonorrhoeae SK-92-679]
 gi|240128620|ref|ZP_04741281.1| hypothetical protein NgonS_08323 [Neisseria gonorrhoeae SK-93-1035]
 gi|254494134|ref|ZP_05107305.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|260440076|ref|ZP_05793892.1| hypothetical protein NgonDG_03140 [Neisseria gonorrhoeae DGI2]
 gi|268597429|ref|ZP_06131596.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268599601|ref|ZP_06133768.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268604110|ref|ZP_06138277.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268682568|ref|ZP_06149430.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268684729|ref|ZP_06151591.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268687008|ref|ZP_06153870.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291043364|ref|ZP_06569087.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|293398668|ref|ZP_06642846.1| hypothetical protein NGNG_01333 [Neisseria gonorrhoeae F62]
 gi|59718589|gb|AAW89994.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|226513174|gb|EEH62519.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268551217|gb|EEZ46236.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268583732|gb|EEZ48408.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268588241|gb|EEZ52917.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268622852|gb|EEZ55252.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268625013|gb|EEZ57413.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268627292|gb|EEZ59692.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291012970|gb|EFE04953.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|291611139|gb|EFF40236.1| hypothetical protein NGNG_01333 [Neisseria gonorrhoeae F62]
 gi|317164664|gb|ADV08205.1| hypothetical protein NGTW08_1237 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 700

 Score = 99.6 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 50/385 (12%), Positives = 115/385 (29%), Gaps = 29/385 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  +  L  L    +    +V       + R   ++       +KI+    I+  +LP 
Sbjct: 12  LKYAVAVLTMLLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIRRRLLPR 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I + + G     ++   +   +  L S  I+V    +    L       G 
Sbjct: 71  PTVILKNLTITEPDGGRVAVSVKETKIGLSWKNLWSDRIQVEKWVVSGADLALTRDRNGA 130

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            N               + +I V+   +++      Q   L +++L + +   +      
Sbjct: 131 WNIQDLFDGAKHSA--SVNRIIVENSTVRLN--FLQQQLILKEISLNLQSPDSSGQ---Q 183

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S    V  + +  + ++          P  +     +       + I I   G+    
Sbjct: 184 FESSGILVWRKLSVPWKSRGLFLSDGIGTPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-RY 288
                           +   NL L+A+   L            +G F       R    +
Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPALALKNNSIKTGTVNGTFTAGGEYARWDGSF 302

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
           KL     +S        ++S       +F     ++   L     +  +   +    L  
Sbjct: 303 KLDKANLHSGIANIGNAEISG------SFKTPRLQTNFSLGSPLVWSRDNGLDA-PRLHI 355

Query: 349 DDIQYSVNKKEEKDNSHDKENQENF 373
             +Q +V++  +       +   + 
Sbjct: 356 STLQDTVDRLPQPRFISRLDGSLSI 380


>gi|260575309|ref|ZP_05843309.1| AsmA family protein [Rhodobacter sp. SW2]
 gi|259022569|gb|EEW25865.1| AsmA family protein [Rhodobacter sp. SW2]
          Length = 658

 Score = 99.6 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 84/289 (29%), Gaps = 32/289 (11%)

Query: 36  FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFL 93
             R+     G+ +A +GG+   I P   V    + I   E        + E L++R +  
Sbjct: 34  AAREFGRATGRVLAFEGGVTPSIWPVLGVETGPVSISNAEWSDAGPMLRAEALAIRLDMG 93

Query: 94  PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----RKSTMDMIHNVILEKIHVKGGRI 149
            LL GE+R+  +    P L       G  NW        +         L+   V GG +
Sbjct: 94  ALLGGEVRITGISAVGPVLLLERDKDGRGNWQFGGKGGGAGAASGAPFTLDLGTVTGGAV 153

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209
              D+ + +   L+ +            +  +  S  G +        + +         
Sbjct: 154 HYTDRSTGRSLNLTGI-----------EAEAAFPSFTGPLDLTLKAAMNGQPLDVTAQIE 202

Query: 210 FPAKNKAISL-KIQLFPLAYPIIIDLFGNLF---------WNEKQPIYSGVFSVAGDFSK 259
                 A  L  + L   +        G +                  + V ++AG    
Sbjct: 203 SFGPFMAGQLVPMTLNATSGVARASFKGQMAASPLVAEGTLQADLADLAAVSALAGAGRP 262

Query: 260 LLNLELSAKKSRLSGNFKIS-----DGNVRISRYKLQSILPNSSTDEDN 303
            L   L A+ + +SG   ++                  +  ++    D 
Sbjct: 263 NLPEGLGARNAAVSGALTLTAEGSLHLRAGTVTLDGNVLQGDADLTTDG 311


>gi|254805448|ref|YP_003083669.1| hypothetical protein NMO_1511 [Neisseria meningitidis alpha14]
 gi|254668990|emb|CBA07338.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
          Length = 731

 Score = 99.6 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 53/385 (13%), Positives = 114/385 (29%), Gaps = 32/385 (8%)

Query: 4   RVLIGLGFLFSVVLVGAFT---VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           R+   +  L  ++L        V       + R   ++       +KI+    I+  +LP
Sbjct: 38  RLKYAVAVLTILLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLP 96

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            P+V  K++ I +         ++   +   +  L S  I+V    +    L      KG
Sbjct: 97  RPTVILKNLTITEPGGNRTAVSVKETKIGLGWKNLWSDRIQVEKWVVSGAELALTRDRKG 156

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
           V N               + +I ++   +++   +         LNLQ            
Sbjct: 157 VWNIQDLIDNPKRKA--SVNRIIIENSTVRLDLPQDRLTLKEVRLNLQSPDSSGQQ---- 210

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
             +S    V  + +  + ++          P  +     + +     + I +   G+   
Sbjct: 211 -FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEAETALNGHRIAVSTTGSPTI 268

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-R 287
                            +   NL L+A+   L            +G F       R    
Sbjct: 269 RFNAGGADAADLALRADTAFHNLHLTAQIPALALRNNGIKIETVNGAFTAGGEYARWDGS 328

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347
           +KL     +S        ++S       +F     ++   LN    + E +  +    L 
Sbjct: 329 FKLDKANLHSGIANIGNAEISG------SFKTPRHQTNFSLNSPLVWTENKGLDA-PRLY 381

Query: 348 KDDIQYSVNKKEEKDNSHDKENQEN 372
              +Q +VN+  +       +   +
Sbjct: 382 VSTLQDTVNRLPQPRFISRLDGSLS 406


>gi|58426029|gb|AAW75066.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 311

 Score = 99.6 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 70/209 (33%), Gaps = 14/209 (6%)

Query: 67  KDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124
           + + +           +++    +  E  PLL G++R+ ++ ++ P L     +      
Sbjct: 4   ERLSLGNASWSKRGAMAELNAAEIDVELWPLLRGKLRLPEIRLEHPTLLLEAGNDSHPGN 63

Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
           +    +        L ++ V  GR++ ID  S     +           +N ++P S D 
Sbjct: 64  WVFDQSHSDSSMPRLGRLLVNNGRLQYIDDASRSDVDV----------AINSLAPPSSDQ 113

Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAISLKIQLFPLAYPIIIDLFGNLFWNE 242
               +  +G G +     A K     P +        +I L   A      + G L    
Sbjct: 114 RAAPISIDGKGRWKGYPFALKGNTASPLELSQSEHPFRIDLRGSAGATRTHVRGTLTNPF 173

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSR 271
           +  ++    +++G     L L  S     
Sbjct: 174 QLRVFDLQMALSGQDMADLYLLASQYHPH 202


>gi|94970883|ref|YP_592931.1| AsmA [Candidatus Koribacter versatilis Ellin345]
 gi|94552933|gb|ABF42857.1| AsmA [Candidatus Koribacter versatilis Ellin345]
          Length = 862

 Score = 99.6 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 37/275 (13%), Positives = 79/275 (28%), Gaps = 32/275 (11%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66
             + ++   +L+G F +P FI+   +R       +  VG+   V G +++ +LP P    
Sbjct: 23  KIMFWIVVAILLGIF-LPPFINVNRYRARIASSISNAVGRPATVGG-VELRLLPQPGFDL 80

Query: 67  KDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124
            ++ I      S     + E ++       L  G + V  + +  P LN   S  G  N 
Sbjct: 81  HNVEIADDPSISPEYLLRAEEVTAYLRLSSLWRGRLEVARLNLTDPSLNVVRSDDGRWNL 140

Query: 125 ------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI--- 169
                                        I   G RI        + +  ++ +L +   
Sbjct: 141 ETLLSRTTQIPSAPTAQAHPESARRRFPYIEATGARINFKFGLEKKAFTFTEADLALWLA 200

Query: 170 ------------SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217
                        +R    ++      ++GS        +   + +         +   +
Sbjct: 201 AENSWHMRLEAKPSRVDTKVTDTGSIKMEGSFERNSQLRYTPVKFSINWRDAQLGQVTKL 260

Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS 252
            L            + + G+    +   I      
Sbjct: 261 -LSGADHGWRGGTTLSITGSGTPADLAVIADVRVD 294


>gi|240116114|ref|ZP_04730176.1| hypothetical protein NgonPID1_07696 [Neisseria gonorrhoeae PID18]
 gi|268601780|ref|ZP_06135947.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268585911|gb|EEZ50587.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
          Length = 700

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 50/386 (12%), Positives = 115/386 (29%), Gaps = 32/386 (8%)

Query: 4   RVLIGLGFLFSVVLVGAFT---VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           R+   +  L  ++L        V       + R   ++       +KI+    I+  +LP
Sbjct: 11  RLKYAVAVLTMLLLAAIGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIRRRLLP 69

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            P+V  K++ I + + G     ++   +   +  L S  I+V    +    L       G
Sbjct: 70  RPTVILKNLTITEPDGGRVAVSVKETKIGLSWKNLWSDRIQVEKWVVSGADLALTRDRNG 129

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             N               + +I V+   +++      Q   L +++L + +   +     
Sbjct: 130 AWNIQDLFDGAKHSA--SVNRIIVENSTVRLN--FLQQQLILKEISLNLQSPDSSGQ--- 182

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
             +S    V  + +  + ++          P  +     +       + I I   G+   
Sbjct: 183 QFESSGILVWRKLSVPWKSRGLFLSDGIGTPEIS-PFHFEASTSLDGHGITISTTGSPSV 241

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-R 287
                            +   NL L+A+   L            +G F       R    
Sbjct: 242 RFNAGGADAAGLGLRADTSFRNLHLTAQIPALALKNNSIKTGTVNGTFTAGGEYARWDGS 301

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347
           +KL     +S        ++S       +F     ++   L     +  +   +    L 
Sbjct: 302 FKLDKANLHSGIANIGNAEISG------SFKTPRLQTNFSLGSPLVWSRDNGLDA-PRLH 354

Query: 348 KDDIQYSVNKKEEKDNSHDKENQENF 373
              +Q +V++  +       +   + 
Sbjct: 355 ISTLQDTVDRLPQPRFISRLDGSLSI 380


>gi|116696007|ref|YP_841583.1| hypothetical protein H16_B2071 [Ralstonia eutropha H16]
 gi|113530506|emb|CAJ96853.1| conserved hypothetical membrane protein [Ralstonia eutropha H16]
          Length = 1329

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/342 (8%), Positives = 92/342 (26%), Gaps = 40/342 (11%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           R+   +       L        F      +   E+ AT  +G+K+ + G   +      +
Sbjct: 26  RLTTRVAGGVVAALAVFGLAGYFGGPPLLKYLIEKNATDALGRKVTL-GRAHVRPF-ELA 83

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
               D+ I +++  +    +           +      V ++++D+  ++    + G  +
Sbjct: 84  ATLTDLTIYERDGKTPALTLGEAEANTSLASVWHLAPVVDNLHVDRLAVHVVRDADGRMS 143

Query: 124 WFQRKST---------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
           +   +                   +  I V G      D++      + +L L +     
Sbjct: 144 FADVQEKLAALPPKPPDAKPARFSVNNIAVTGSSFGYDDKQLGSSLRVDNLTLTLPFLSN 203

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                  +           +   +    A        A ++   L + L  L    ++  
Sbjct: 204 LPHDVEIVT------RPTLSARVNGTPLALDGEVLPFADSRQTRLNVNLDGLEVARLMAF 257

Query: 235 -----FGNLFWNEKQPIYSGVFS----------VAGDFSKLLNLELSAKKSRL-SGNFKI 278
                   +   +     +  F           +     +   +     +  + SG   +
Sbjct: 258 APPLRDAEVKSGKLDTRLTVAFRQQKDTQEMLVMGTAALRDAEVVTRVGQPLVKSGRLAV 317

Query: 279 SDGNV-------RISRYKLQSILPNSSTDEDNKTKVSQDEEN 313
             G +       ++   +++ +   ++   D    ++     
Sbjct: 318 DIGKLEPLAHRAQLRSVEIEGLGVEAARRADGSLNLATAFLP 359


>gi|239999415|ref|ZP_04719339.1| hypothetical protein Ngon3_08012 [Neisseria gonorrhoeae 35/02]
 gi|268595235|ref|ZP_06129402.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268548624|gb|EEZ44042.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
          Length = 700

 Score = 99.2 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 51/385 (13%), Positives = 115/385 (29%), Gaps = 29/385 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+  +  L  L    +    +V       + R   ++       +KI+    I+  +LP 
Sbjct: 12  LKYAVAVLTMLLLAAVGLHASVYRTFTPENIRSRLQQSI-AHTHRKISFDADIRRRLLPR 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V  K++ I Q + G     ++   +   +  L S  I+V    +    L       G 
Sbjct: 71  PTVILKNLTITQPDGGRVAVSVKETKIGLSWKNLWSDRIQVEKWVVSGADLALTRDRNGA 130

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            N               + +I V+   +++      Q   L +++L + +   +      
Sbjct: 131 WNIQDLFDGAKHSA--SVNRIIVENSTVRLN--FLQQQLILKEISLNLQSPDSSGQ---Q 183

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +S    V  + +  + ++          P  +     +       + I I   G+    
Sbjct: 184 FESSGILVWRKLSVPWKSRGLFLSDGIGTPEIS-PFHFEASTSLDGHGITISTTGSPSVR 242

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVRIS-RY 288
                           +   NL L+A+   L            +G F       R    +
Sbjct: 243 FNAGGADAAGLGLRADTSFRNLHLTAQIPALALKNNSIKTGTVNGTFTAGGEYARWDGSF 302

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
           KL     +S        ++S       +F     ++   L     +  +   +    L  
Sbjct: 303 KLDKANLHSGIANIGNAEISG------SFKTPRLQTNFSLGSPLVWSRDNGLDA-PRLHI 355

Query: 349 DDIQYSVNKKEEKDNSHDKENQENF 373
             +Q +V++  +       +   + 
Sbjct: 356 STLQDTVDRLPQPRFISRLDGSLSI 380


>gi|150395541|ref|YP_001326008.1| AsmA family protein [Sinorhizobium medicae WSM419]
 gi|150027056|gb|ABR59173.1| AsmA family protein [Sinorhizobium medicae WSM419]
          Length = 608

 Score = 99.2 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 42/325 (12%), Positives = 95/325 (29%), Gaps = 27/325 (8%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI-DQKEDGSFESKIEG 85
           +  T+ R   ER      G K  + G  ++   P P +      I     +    ++I  
Sbjct: 45  VSTTEARAAMERMLDDWSGGKSTISGEPEVRFWPEPLLTLPMATIVTSGPEQRPLAEIGR 104

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-----QRKSTMDMIHNVILE 140
           ++     L  L GE  + ++ + +P +     + G  NW          T        + 
Sbjct: 105 ITASFSVLSALRGEQALEEVTLVEPVITLERGADGTVNWQKPRWLVPPDTTIPQDEAPVG 164

Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200
            I ++ GR++IID+ +                   I   L   S  G +  + +     +
Sbjct: 165 DITIENGRVRIIDRMAAN---------GGGIDIAGISGTLKWPSFGGRLSTQFSATIGGE 215

Query: 201 RSAFKITANFPAKNKAIS-LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259
           +  +      P    A     ++    + P+     G      +    SG   ++     
Sbjct: 216 QIGWAFVCEEPLALFAGRNAALKTSLTSAPLTFSFEGTGNLPPQLFA-SGHLQMSAPSLA 274

Query: 260 LLNLE--------LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE 311
            L           L A    +      S+  +++   +L      ++   D   ++   +
Sbjct: 275 RLAAWYRNVPDAGLPAGGFSIDTKVDTSETALKLEDLQLAIGGAAATGVLD--VQLGSGK 332

Query: 312 ENLLNFSENGAESMHDLNETDFFEE 336
              +  +        +       + 
Sbjct: 333 RPRVEGTLAFDRIDLNGLPLAALKP 357


>gi|268680364|ref|YP_003304795.1| hypothetical protein Sdel_1745 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268618395|gb|ACZ12760.1| Uncharacterized protein involved in outer membrane biogenesis
           [Sulfurospirillum deleyianum DSM 6946]
          Length = 482

 Score = 99.2 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 51/408 (12%), Positives = 124/408 (30%), Gaps = 39/408 (9%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M ++V++ +   F+  +V  F +   ID+ +++   ++      G ++ +KG I + + P
Sbjct: 1   MFQKVVLSIVLFFAFSIVAFFLLIKVIDFNEYKPRLQKMIKDATGYELIIKGDITLSLSP 60

Query: 61  FPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
              +   DI +    +      + ++   +  E  PLL+ EI++  + +D   L    + 
Sbjct: 61  -VGISVLDIEVFNPHEKEKGAFATLKSFDVALEVAPLLTKEIKIHYLSLDSLALTLEKNE 119

Query: 119 KGVSNWFQRKSTMDM-----------------IHNVILEKIHVKGGRIKIIDQESDQVYF 161
           +   N+     +                    +  V +++I      +   D    +   
Sbjct: 120 QEQFNFELPTVSKKEEAKPSTEQNTTLEKAPLLPLVNVKEIKFSNAHVSYHDVRQKETLQ 179

Query: 162 LSDLNLQISARFLN------IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215
           +  +N  I     +             D+  GS+   G           ++       ++
Sbjct: 180 IKGINFDIDNIHYDPSKHKFQGLSFIADASIGSLNY-GEYGIKEIYMPLEMK-ESVLSSE 237

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
            +   +   P    + IDL G       +        +A    ++L  E+   K+     
Sbjct: 238 NVQFTLFETPSQGTLKIDLSGKQPKLSLKSKLE-QLKLAQVSKEILKKEILEGKANADLK 296

Query: 276 FKIS-DGNVRISR-YKLQSILPNSSTDEDN----KTKVSQDEENLLNFSENGAESMHDLN 329
                +  +           +   +         K   S D    L+            +
Sbjct: 297 LSFFLNDTLTFKNTVNGFIHVSGENVTFKGYDIDKIVTSVDASKGLSMML----LNVIKS 352

Query: 330 ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
             +     ++ N   D+   ++  S        N    +   N   +K
Sbjct: 353 TQEAKTLLKEVNAKVDIGYSEVHLSDVAASTAKNRLAIKGSVNIVEEK 400


>gi|49475194|ref|YP_033235.1| hypothetical protein BH03950 [Bartonella henselae str. Houston-1]
 gi|49237999|emb|CAF27204.1| hypothetical protein BH03950 [Bartonella henselae str. Houston-1]
          Length = 624

 Score = 99.2 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 56/419 (13%), Positives = 124/419 (29%), Gaps = 71/419 (16%)

Query: 1   MLRRVLIGLGFLFSVVLV----GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           M  R++  L  +F  ++V    G   +P  +     R    +  ++  G  + ++   ++
Sbjct: 1   MRARIIKFLSGIFITIVVLFEVGILILPYLVSTDTIRIRLAQDLSVWTGYNVELRDPPRL 60

Query: 57  HILPFPSVFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +I P+P  +   I +  K  + +   + E + +    + LLSG I   +  I +P     
Sbjct: 61  NIFPYPKAYLSGITLISKMNNAAPLMEAESIEVDLSLVDLLSGHISFSETRIVRPQFVME 120

Query: 116 LSSKGVSNWFQRKSTMDMIHNVIL------------------------EKIHVKGGRIKI 151
              K V+++F R S       + +                         +I ++ G +  
Sbjct: 121 KPVKTVADFFARFSRSRGALGLAIRNAREILKHNPDKPDTKRLLKQPFGRIVIENGILVY 180

Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP 211
            D  S     ++ LN  +        +                  +  + +   I A+  
Sbjct: 181 HDSISGIAEKITGLNAVLDWPESTQEA-----------RFHADARWRGELTKLSINADQA 229

Query: 212 ---AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268
                     +K  L  +     I   G   ++E   ++ G  S+               
Sbjct: 230 LLLLAGGKSQVKASLNSVRGG--ITFIGQARFSE-YYVFDGKVSMR--SPGWNQTLAWIG 284

Query: 269 KSRLSG-----------NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE-ENLLN 316
            ++  G            F     ++++          N+        +V   +   ++ 
Sbjct: 285 DNQFWGHQLKEPIVWESRFVAQPMHIQMDNVAFTMGTANA----RGALEVDFQDYVPIII 340

Query: 317 FSENGAESMHDLNETDFFEEEEKKNK-------NDDLKKDDIQYSVNKKEEKDNSHDKE 368
            S        DL  + F   +EK            D++    Q  V      D +   +
Sbjct: 341 GSLAFDNLDFDLLRSVFSSVKEKNQFLDMADRIGVDVRLSAPQAKVGNVVLTDLAAAIQ 399


>gi|149376060|ref|ZP_01893826.1| hypothetical protein MDG893_03740 [Marinobacter algicola DG893]
 gi|149359697|gb|EDM48155.1| hypothetical protein MDG893_03740 [Marinobacter algicola DG893]
          Length = 733

 Score = 99.2 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 49/365 (13%), Positives = 107/365 (29%), Gaps = 39/365 (10%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLS 87
           D   ++   E+         + + G I    +P   +   D+    ++      K+E L 
Sbjct: 30  DPNTYKPQIEKVVENKTNLDLILAGDIGWSFIP-LGLELNDVEATLED--ERLVKLEQLV 86

Query: 88  MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------------------- 124
            +  F  L++   RV    +     N  +   G  NW                       
Sbjct: 87  AQVSFWSLVTMSPRVDTFLLSGLDANLSVDKNGNGNWTRIMPEGEEQPQQEDPAAPAETA 146

Query: 125 --FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
               ++S      N  +E + +   R+   D+ + Q + L D  +  S   L    PL +
Sbjct: 147 EEQPKESGTSKPLNFNVENVEISNARVHYEDKGTGQAFTLEDFTVNASEITLGSSFPLGV 206

Query: 183 DSI--KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PIIIDLFGNLF 239
                      E  G+   + +A +    F   +      +   P     +  ++ G+L 
Sbjct: 207 SFRFATNQPQFEVQGDISARLAANEALNEFGVSDLEAIFDMNGEPFGGESVRAEIAGSLE 266

Query: 240 WNEKQPIYSGV-FSVAGDFS---KLLNLELSAKKSRLSGNFKISDGNVR--ISRYKLQSI 293
            N +    +   F+ +         L +     K +L G+  I + +++  ++     +I
Sbjct: 267 ANLENETATLNGFTASLADLKLNTDLTVNGFGDKPQLEGSLSIDEFSLKALLAALGQPAI 326

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353
                         +           +      D  +T F         N  +  +    
Sbjct: 327 ETEDPDVMKAVAFSTNIGGPAGTVELSDLTISLD--DTTFQGSASYALANSAIGLNLQGD 384

Query: 354 SVNKK 358
           ++N  
Sbjct: 385 AINAD 389


>gi|213962601|ref|ZP_03390862.1| AsmA family protein [Capnocytophaga sputigena Capno]
 gi|213954596|gb|EEB65917.1| AsmA family protein [Capnocytophaga sputigena Capno]
          Length = 892

 Score = 99.2 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 49/385 (12%), Positives = 114/385 (29%), Gaps = 28/385 (7%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58
           + +++    G    ++++    +P F      +E     A   +   +A++  + I +  
Sbjct: 3   IAKKIFKWGGITLLLLIIAMIAIPFFF-KDTIKEKVIEMANKNLKANLALQ-DVDISLFK 60

Query: 59  -LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
             P   V   D  +  KE   G      + + +      LL+G   +    +    +  +
Sbjct: 61  NFPKAQVTLNDFVLVNKEPFVGDTLFAAKHIDVTLSIKDLLAGNYNLLGANVKDASVYIH 120

Query: 116 LSSKGVSNWF-----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
           L+ +GV N+       +         + +++ +V+  +      + +    ++D+     
Sbjct: 121 LNKEGVGNFDIAIPSDKPEEESAPIKLDIQQYNVENLKFTFKMDDGNLFMEVADIYHSGK 180

Query: 171 ARFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
             F   +  L   +    +   + +          +       KN+  + K Q       
Sbjct: 181 GNFAEEVLDLDTQTKANVTFAMDKSTFMKQVPITLQAILGIDLKNQKYTFK-QNKATVNR 239

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNL-----ELSAKKSRLSGNFKISDGNV 283
           + +   G +   E+   Y   FS     F   L L       S +  + +GN  +     
Sbjct: 240 LDLVFDGFIQLLEEGQRYDLTFSTPTNSFQNFLALIPEEYSKSIENVKTTGNLTL--KGF 297

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343
                    I        +     +  +   L  +         +N T     + K N N
Sbjct: 298 AKGDMVGDKIPT---FGLEMYADNASFKYPNLPKTVRDITIDLKVNNTTGITNDTKVNLN 354

Query: 344 D---DLKKDDIQYSVNKKEEKDNSH 365
                + +D      N      N  
Sbjct: 355 KFTMSIDQDHFSARANVSNIVVNPF 379


>gi|163858293|ref|YP_001632591.1| putative secreted protein [Bordetella petrii DSM 12804]
 gi|163262021|emb|CAP44323.1| putative secreted protein [Bordetella petrii]
          Length = 840

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/344 (10%), Positives = 93/344 (27%), Gaps = 42/344 (12%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82
             L  D   ++   E        + +A+ G +++ + P   +  + + + + +     + 
Sbjct: 26  FLLTFDPNAYKYKLEELVQERYHRTLAIDGELELSLFPRIGLSVQGVSLSEVDSPDTFAS 85

Query: 83  IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF----------------- 125
           IE + +     PLLS  + V  + I+           G  N+                  
Sbjct: 86  IESMRLAVAVWPLLSSNLVVDHVAINGFKARVVRDKNGHLNFENLVGGGAANTLEPAGPA 145

Query: 126 ---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
                             +       + +  + ++ G +++ D+ S     +++LN    
Sbjct: 146 TAAVGAMAGAAQAIATGGAAAPATMQIDIAGLDLQAGELQLQDEISGMAVAVTNLNANTG 205

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL-AYP 229
               N    +S+ +           N   +              + + +++    L A  
Sbjct: 206 RVTYNQPFDVSLSARVEGGNPRIDANLTGQGLLTLDPLAKRFAAQKLDVRMDGNVLGAEA 265

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
             +   GNL +N +         VAG                      ++   + I  +K
Sbjct: 266 KSLAARGNLAFNGRTSSLD----VAGLEIVFQGDVPDPATPMKGVEASVAIPKLAIDPHK 321

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
           LQ  +   +                   + +        +    
Sbjct: 322 LQLQIEKLAVRAKGSLT-----GGPFELAADAPALNISPSSATG 360


>gi|152982071|ref|YP_001354952.1| hypothetical protein mma_3262 [Janthinobacterium sp. Marseille]
 gi|151282148|gb|ABR90558.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 1110

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/338 (12%), Positives = 110/338 (32%), Gaps = 34/338 (10%)

Query: 3   RRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           RR LIGL  +  ++ L G F +P  I     +   E+  T  + ++ ++    K+ + P+
Sbjct: 23  RRTLIGLLAVIVLIGLFGYFALPGII-----KSQAEQIITEKLHRQTSIG---KVEVNPY 74

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +   D+++ + E     +  E L +   +  LL     +  + +  P+++       
Sbjct: 75  TMRLTIHDMKLMEPEGDLTFASFEKLMVNVSYKSLLRFAPVIEQVQLSTPYVHLVRKDAA 134

Query: 121 VSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
            +N          +             I +  G I++ D+ +   + ++DL L +     
Sbjct: 135 RTNIDDIIELINSQPPSPEPARFSAFNIEIDKGHIELDDKTAQTKHEITDLKLGVPFISS 194

Query: 175 NIISP-------LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA-----ISLKIQ 222
                       LS +     ++ +G  +         +  N    +       +     
Sbjct: 195 LPSQVEVFVEPLLSANVNGSPMLIKGKAHPFADPVNAVVDLNLDDVDLTDYLKYVPGTPH 254

Query: 223 LFPLAYPIIIDLFGNLFWNEKQP---IYSGVFSVAGDFSKLLNLELSAKKSRLSGNF--- 276
               +  + + L  +    +++    + SG   +        N +   K   L+      
Sbjct: 255 FKVPSAKLDVHLTADFRQEKEKAPALLLSGNIKLKALQLNDQNDKSIVKLPELAITLNEA 314

Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314
           K+      I++  +  +  + S + + +          
Sbjct: 315 KVLSERFEIAKIAINGVEADISRNANGQLNFENLLTPP 352


>gi|33595528|ref|NP_883171.1| hypothetical protein BPP0843 [Bordetella parapertussis 12822]
 gi|33565606|emb|CAE40252.1| putative exported protein [Bordetella parapertussis]
          Length = 839

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/373 (11%), Positives = 109/373 (29%), Gaps = 41/373 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82
             L  D   ++   E        + + ++G I++ + P   +  + + + +       + 
Sbjct: 26  FLLTFDPNAYKYKLEEAVQARYERTLNIEGEIELSLFPRIGLAVQGVSLSEPNSPDVFAS 85

Query: 83  IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--------------- 127
           I+ + +     PLLS  + V  + I+           G  N+                  
Sbjct: 86  IDSMRLAVAVWPLLSNSLVVDHVTINGFKARVIRGKDGHFNFENLVGGSVQSTDVPGNAA 145

Query: 128 -----------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
                              +      + +  + +K G I++ D  S     ++ LN    
Sbjct: 146 EATAGAITGTAQAIVNGTVSTPKSMQIDIAGLDLKDGEIQLQDAMSGMAVAITKLNAATG 205

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-PLAYP 229
               N    +S+ +               +              + + L+++   P A  
Sbjct: 206 RVTYNQPFDVSLSARVEGGNPRVDAGLTGQAQLTLDPLAKRYAAQRLDLRMEGRLPGAQA 265

Query: 230 IIIDLFGNLFWNEKQPIYS-------GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
             +   GN+ +N                  +    +KL N+E S    +L+ +   ++  
Sbjct: 266 KSLAARGNVAFNGMTSSLDVAGLEILFQGDIVDTATKLTNVEASVAMPKLAVDPHKTELQ 325

Query: 283 VRISRYKLQSILPNSSTDEDNKT-KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341
           +     + +  +P    +       ++    N    + +G     +L+ +          
Sbjct: 326 IDKLAVRAKGAMPGGPFELAVDAPALNISPTNASGDALSGRVRTQELDASFGLNGISGNA 385

Query: 342 KNDDLKKDDIQYS 354
              D+K+  +  +
Sbjct: 386 GELDIKEAKLDST 398


>gi|33599926|ref|NP_887486.1| hypothetical protein BB0937 [Bordetella bronchiseptica RB50]
 gi|33567523|emb|CAE31436.1| putative exported protein [Bordetella bronchiseptica RB50]
          Length = 839

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/373 (11%), Positives = 109/373 (29%), Gaps = 41/373 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82
             L  D   ++   E        + + ++G I++ + P   +  + + + +       + 
Sbjct: 26  FLLTFDPNAYKYKLEEAVQARYERTLNIEGEIELSLFPRIGLAVQGVSLSEPNSPDVFAS 85

Query: 83  IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--------------- 127
           I+ + +     PLLS  + V  + I+           G  N+                  
Sbjct: 86  IDSMRLAVAVWPLLSNSLVVDHVTINGFKARVIRGKDGHFNFENLVGGSVQSTDVPGNAA 145

Query: 128 -----------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
                              +      + +  + +K G I++ D  S     ++ LN    
Sbjct: 146 EATAGAITGTAQAIVNGTVSTPKSMQIDIAGLDLKDGEIQLQDAMSGMAVAITKLNAATG 205

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-PLAYP 229
               N    +S+ +               +              + + L+++   P A  
Sbjct: 206 RVTYNQPFDVSLSARVEGGNPRLDAGLTGQAQLTLDPLAKRYAAQRLDLRMEGRLPGAQA 265

Query: 230 IIIDLFGNLFWNEKQPIYS-------GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
             +   GN+ +N                  +    +KL N+E S    +L+ +   ++  
Sbjct: 266 KSLAARGNVAFNGMTSSLDVAGLEILFQGDIVDTATKLTNVEASVAMPKLAVDPHKTELQ 325

Query: 283 VRISRYKLQSILPNSSTDEDNKT-KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341
           +     + +  +P    +       ++    N    + +G     +L+ +          
Sbjct: 326 IDKLAVRAKGAMPGGPFELAVDAPALNISPTNASGDALSGRVRTQELDASFGLNGISGNA 385

Query: 342 KNDDLKKDDIQYS 354
              D+K+  +  +
Sbjct: 386 GELDIKEAKLDST 398


>gi|194292519|ref|YP_002008426.1| hypothetical protein RALTA_B1786 [Cupriavidus taiwanensis LMG
           19424]
 gi|193226423|emb|CAQ72372.1| conserved hypothetical protein, DUF748 [Cupriavidus taiwanensis LMG
           19424]
          Length = 1321

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/329 (12%), Positives = 98/329 (29%), Gaps = 45/329 (13%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED 76
           L G F  P  I     +   E+QAT  +G+K+ + G  ++      +    D+ I +++ 
Sbjct: 38  LAGYFGGPPLI-----KHLVEKQATEALGRKVTL-GQAQVRPF-ELAATLTDLTIYERDG 90

Query: 77  GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF---------QR 127
            +    +  +        +      V ++++D+  ++    + G  ++            
Sbjct: 91  KTPALTLGEVQADTSLASVWHLAPVVDNLHVDRLAVHVVRGADGRMSFADVQEKFAALPP 150

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187
           K          +  I V G  ++  D+  D    + +L L +            +     
Sbjct: 151 KPADAEPARFSVNNIAVTGSSVRYDDKLLDTTLRVDNLTLTLPFLSNLPHDVEIVT---- 206

Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE-KQPI 246
                 +   +    A        A ++   L I L  L    ++     L   E K   
Sbjct: 207 --RPTLSAQVNGTPLALDGEVLPFADSRQTRLNINLDGLEVARMMAFAPTLRDAEVKSGK 264

Query: 247 YSGVFSVA--------------GDFSKLLNLELSAKKSRL-SGNFKISDGNV-------R 284
                +VA                  +   +   A +  + SG   +    +       +
Sbjct: 265 LDTRLTVAFRQQQDTQEMVVTGSAALRDAEVRTRAGQPLIRSGKLAVDIARLEPLAHRAQ 324

Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEEN 313
           +   +++ +   ++   D    ++     
Sbjct: 325 LRSVEIEGLAVEAARRADGSLNLATAFLP 353


>gi|257140987|ref|ZP_05589249.1| hypothetical protein BthaA_17559 [Burkholderia thailandensis E264]
          Length = 1299

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 86/287 (29%), Gaps = 27/287 (9%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66
           G+G L  +V+ G      F      R   E+Q +  + +   +    +I   P+   +  
Sbjct: 17  GIGVLIFLVVFGLLG--FFAAPPLIRHVAEQQLSRQLERPATIA---RIAFNPYTLRLEA 71

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125
             + + ++        I  L +RA +  L      V ++ +DQP            N+  
Sbjct: 72  DGVHVGERGGQGDFVDIGKLVVRASWTSLARFAPIVDEVRLDQPRFRIVRYDAQRLNFTD 131

Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                               +  I V  GRI   D+  +  + +    L I         
Sbjct: 132 LVDKFSKPSPQPSAKPVRFSVSNIQVNDGRIDFDDRLLNAKHVVDQWTLGIPFIATLPSK 191

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237
                     V  +     D    A        A+++  S+ ++L  L  P ++      
Sbjct: 192 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKLGGLDVPRLLSYAPTR 245

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
           L  + +    S    V         +       R+SG   ++D  V 
Sbjct: 246 LPVDVRSGKLSSNLDV------NFAMAGDTPSLRVSGTVDLNDAQVT 286


>gi|238025466|ref|YP_002909698.1| hypothetical protein bglu_2g21580 [Burkholderia glumae BGR1]
 gi|237880131|gb|ACR32463.1| Hypothetical protein bglu_2g21580 [Burkholderia glumae BGR1]
          Length = 1298

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 78/251 (31%), Gaps = 25/251 (9%)

Query: 36  FERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLP 94
            E+Q +  +G+   +    +I + P+   +    IR+ +   G     I  L +R  +  
Sbjct: 59  AEQQLSRQLGRPARIA---RIALNPYTLRLEADGIRLGEPAGGGPFLDIAKLVVRPAWTS 115

Query: 95  LLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKG 146
           LL G   V ++ ID P L+         N                       +  I +  
Sbjct: 116 LLRGAPIVDEVRIDSPRLHLVRYDAQRFNVSDLIETFSKPSPQPSSGPARFSVSNIQINQ 175

Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKI 206
           GRI   D+     + +  L L +                   V        D    A   
Sbjct: 176 GRIDFDDRLLGVRHTVDQLTLGVPFIATLASKADLF------VQPTLRLRLDGSPIAIDG 229

Query: 207 TANFPAKNKAISLKIQLFPLAYPIIID-LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
                A+++   + ++   L  P ++  +   L    K    S   +V+        ++ 
Sbjct: 230 RTKPFARSRESRINLKFDGLDVPKLLSYVPARLPVEVKSGRLSSDLAVS------FAMDG 283

Query: 266 SAKKSRLSGNF 276
            A+  R+SG  
Sbjct: 284 DARTLRVSGRV 294



 Score = 53.0 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/301 (9%), Positives = 80/301 (26%), Gaps = 40/301 (13%)

Query: 53  GIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112
            +  +I P  ++    + +           +    +    + L +    V  + +D    
Sbjct: 526 PLAANIGPS-TLTLSALELGAPYAKGPVIALSKARVGLTRIDLGARRAEVASIDLDGLSA 584

Query: 113 NFYLSSKGVSNWF----------------------QRKSTMDMIHNVILEKIHVKGGRIK 150
                  G  +                         R +      +  +  +++  G+  
Sbjct: 585 EVARLKDGQIDLASLAGPATAREPAPGARGGRAHLDRGAEAAAPWHYRIGALNLTDGQAS 644

Query: 151 IIDQESDQVYFL--SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK--RSAFKI 206
             D  + +   L  S L L++     ++  PL + S+  ++  +G+     +        
Sbjct: 645 FTDFSTPRPVRLAFSPLTLKLGPIGDDLSKPLPL-SLHATLNRKGSVEVAGELRAVPLDA 703

Query: 207 TANFPAKNKAIS-----LKIQLFPLAYPIIIDLFGNLFWNEKQ----PIYSGVFSVAGDF 257
                 K    +         L        +D  G+L  ++        Y G  ++    
Sbjct: 704 RLRIDGKRLDAAAFEPYFGSALNATIASARLDASGDLAVSQGGAATRASYRGDLALLDVR 763

Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317
                        R   +  +S+        +   +     +  +   +V  D +  LN 
Sbjct: 764 LLDKASSDPFAGWR---SLALSNLKADYDSARGTDLDVARVSFANFYGRVLLDAQGRLNL 820

Query: 318 S 318
           +
Sbjct: 821 N 821


>gi|78222389|ref|YP_384136.1| AsmA [Geobacter metallireducens GS-15]
 gi|78193644|gb|ABB31411.1| AsmA [Geobacter metallireducens GS-15]
          Length = 1079

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 93/299 (31%), Gaps = 23/299 (7%)

Query: 18  VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK-GGIKIHILPFPSVFFKDIRIDQKED 76
           V  F +  F +   +++    +    + +++  + G +       P+  F  + I +++ 
Sbjct: 24  VAIFFLAHFHELDTYKDQILAEVQKSLNRQVTYEKGEVTFRF--TPAFSFTKVVIKERDG 81

Query: 77  GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN 136
            +  +  + +S R   LPLL G++ V  +  ++P +    +  G  N             
Sbjct: 82  LTTFATADRVSFRLALLPLLEGKVVVGKLMAERPTIQIIRNRDGTFNISDLLEEKKGAPP 141

Query: 137 VILEKIHVKGGRIKIIDQ---ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193
           + +  I +  G+I   DQ    +  V  L    L++        +  +I +        G
Sbjct: 142 LRMRGISIHDGKITFTDQAATANGVVTRLEKTALELDRIVRGKETEFTIATTLAQGATTG 201

Query: 194 TGNFDN-------------KRSAFKITANFPAKNKAISLKIQLFP-LAYPIIIDLFGNLF 239
           T                   R   K+ A   +         +  P      + D+  ++ 
Sbjct: 202 TLFARGLADLPREGHPMTETRIDAKVEARNLSAAHYWPYYGRFVPFDPLAGLFDVKASIH 261

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---LSGNFKISDGNVRISRYKLQSILP 295
                    G   VAG       +  +    R   L+   K     V +S    +    
Sbjct: 262 GTAADFTSKGTVHVAGLRFSYPKVFHAVLTPRDLQLNYKLKRDRYQVDVSAVDFRMDGL 320


>gi|254463646|ref|ZP_05077057.1| AsmA [Rhodobacterales bacterium Y4I]
 gi|206684554|gb|EDZ45036.1| AsmA [Rhodobacterales bacterium Y4I]
          Length = 635

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 89/311 (28%), Gaps = 39/311 (12%)

Query: 36  FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFL 93
              Q     G+++ + G +     P   V    + +   +        + E +++     
Sbjct: 34  AADQLEAQTGRQLGLGGKVSFTFWPVLGVKADAVTLSNADWAGPEPMLRAERVTIGVAAA 93

Query: 94  PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---------RKSTMDMIHNVILEKIHV 144
            LL G +RV ++    PHLN   +++G+ NW             +       + +E + +
Sbjct: 94  DLLRGNVRVTEVSAILPHLNLATNAEGIGNWVFGGGGAAAGSTGAGEGTGQPLRIEAVEL 153

Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204
            G  ++      +    + + +L +     +           G+V A  T     +    
Sbjct: 154 TGATLRYA-AHGEAPVEMKNADLSLLWPEPD-----------GTVNARVTLRPAGEPVEI 201

Query: 205 KITANFPAKNKAISLKIQLFPLAYP-IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL 263
                  A   A  +      +A P       G+   N +    SG  +   + +     
Sbjct: 202 DAEIGTFAAFLAGEVSSVGATVAAPGGRGRFDGHADINGEA---SGRLTFGAEDAARTGA 258

Query: 264 ELSAKKSRLSGNFKI--------SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315
            L A    +     +        +DG + +    L+               V   +   +
Sbjct: 259 ALGAVLPEVLAQKAVFGADVTYTADGRLSMRDLALELG----KNKLSGAADVEFAKRPRI 314

Query: 316 NFSENGAESMH 326
                G     
Sbjct: 315 TARLQGGALDF 325


>gi|224369836|ref|YP_002604000.1| hypothetical protein HRM2_27440 [Desulfobacterium autotrophicum
           HRM2]
 gi|223692553|gb|ACN15836.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 1200

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/397 (12%), Positives = 127/397 (31%), Gaps = 45/397 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61
           +R+LI +  +    LVG F VP+       +    +     + +++ ++   +I + P+ 
Sbjct: 10  KRILIPVIIMVLYTLVGFFLVPVL-----GKNILCKSLGKALNRQVTIE---RIAVNPYA 61

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            +   ++  + + ++       + +        L +  + V +  ++ P ++   +    
Sbjct: 62  LTATIEEFSVAE-QNKDALFFAKRIFANLSLSSLFTLGLNVSEFSLENPRVSIVRNRDAT 120

Query: 122 SNW--------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
            N+               ++           L+ IH+  G  K  DQ ++  + ++D +L
Sbjct: 121 FNFSDLLALGQDNKTDAPEKDEENKGPIRFTLKNIHITQGEFKFEDQFTNVSHAVTDFSL 180

Query: 168 QISARFLNIISPLSIDSIKGSVIA-EGTGNFDNKRSAFKITANFPAKNKA---------- 216
            +        S      +  + +  + T +   + + F        + K           
Sbjct: 181 MLPLLTSREKSRHEAAGMDINFVVNQATVDVHVESTPFAADMATQVEIKISDVDVVHYLS 240

Query: 217 -ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY--SGVFSVAGDFSKLLNLELSAKKSRLS 273
            + +   +   +  + +DL         +P     G  +      K    E   K   L+
Sbjct: 241 YLPIPETIQLKSLGMNLDLDAAYRSTTPKPSLQIQGKVTAVNAEIKGAAEEEIIKFPSLT 300

Query: 274 GNFKISD---GNVRISRYKLQSILPNSSTDEDNKTK----VSQDEENLLNFSENGAESMH 326
            +   SD   G + I++  +Q+   N S D+         + Q +          A++  
Sbjct: 301 VDISPSDILAGKLNITKILMQTPQLNLSRDKTGTVNLLTYIPQKQAPPQQAENKVADNKA 360

Query: 327 DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDN 363
           D   +D F       +  D        S  +      
Sbjct: 361 DKTHSDPFSLNLDNFEIKDATVGFQDLSNEQAFNTTL 397



 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/341 (11%), Positives = 93/341 (27%), Gaps = 45/341 (13%)

Query: 42  LIVGKKIAVKGGIKIHILPFPSVFFKD-IRIDQKE----DGSFESKIEGLSMRAEFLPLL 96
             +G  + +    +    P PS+  +  +     E          K   L++      +L
Sbjct: 251 KSLGMNLDLDAAYR-STTPKPSLQIQGKVTAVNAEIKGAAEEEIIKFPSLTVDISPSDIL 309

Query: 97  SGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--------------------RKSTMDMIHN 136
           +G++ +  + +  P LN      G  N                          T     +
Sbjct: 310 AGKLNITKILMQTPQLNLSRDKTGTVNLLTYIPQKQAPPQQAENKVADNKADKTHSDPFS 369

Query: 137 VILEKIHVKGGRIKIIDQESDQVY--FLSDLNLQISARFLNIISPLS-----IDSIKGSV 189
           + L+   +K   +   D  ++Q +   L  +N+ I                    IK   
Sbjct: 370 LNLDNFEIKDATVGFQDLSNEQAFNTTLFPINVLIKNVKAGSTISGEYRLTLASEIKEDF 429

Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
              G       ++   +  +    NK +     L        I+   N         +  
Sbjct: 430 ETSGRFQTHPVQAQGSMNLSNLVLNKYLPYYAGL--------INFDVNDGRATLSANFDI 481

Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
                   + +  ++   +   +S +    +  V I  + ++    + S  + N   ++ 
Sbjct: 482 SEKPDKLETTINTVDFMVQSLVIS-DHDAKEQMVEIPEFNIKGASIDLSGKQINTGVITL 540

Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350
            + N     +   E            ++E K  N  +    
Sbjct: 541 RDANFFIQRDKAGELNLVK---GLLPDKETKKPNTPVLAPQ 578


>gi|209965141|ref|YP_002298056.1| hypothetical protein RC1_1847 [Rhodospirillum centenum SW]
 gi|209958607|gb|ACI99243.1| conserved hypothetical protein [Rhodospirillum centenum SW]
          Length = 1041

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 77/235 (32%), Gaps = 17/235 (7%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK---EDGSFE 80
           P  +DW  FR +        +G+ + + G + + +LP P++   D+ + +          
Sbjct: 22  PALVDWNRFRPELADLLATAMGRDVTIAGDVDLTLLPSPTLLAADVALSEPGAAPGRPPL 81

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILE 140
           + +  + ++   LPLL+G +++  + +    +       G            +   V L+
Sbjct: 82  ASVGTVEVKVRLLPLLAGRVQIEKLALVDSRMRIEFRPDGSR--IGPIDLSALGGTVQLD 139

Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200
           ++ +  G + +   +  +   L  +              +     +G     G+ + D  
Sbjct: 140 RMTIHRGTLTLEADDGRRRLDLVSI-----------RGSVDAGGPQGPFNVAGSFSLDGV 188

Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255
                +T    A    + ++  L        +   G +  +       G     G
Sbjct: 189 PLTLDVTTGRIAPGATVPVRATLGVPDGKGQVRFAGVVP-DGDPSRLQGDLRAEG 242


>gi|119898485|ref|YP_933698.1| hypothetical protein azo2194 [Azoarcus sp. BH72]
 gi|119670898|emb|CAL94811.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
          Length = 1199

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/353 (12%), Positives = 100/353 (28%), Gaps = 23/353 (6%)

Query: 29  WTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLS 87
               R    +     +G+++AV+G       PF  +   + +RI + +  +     + + 
Sbjct: 40  PPVLRHYTVQILHDKLGREVAVEG---ARFNPFTLTAELRGVRIMEADGSAEALAADLVR 96

Query: 88  MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------QRKSTMDMIHNVILEK 141
              E   ++     + ++ +  P + F   + G SNW         +   +      L  
Sbjct: 97  ANLELESVVRRAPVLHELAVVAPRVQFVRRADGGSNWSDVVERLAAEPPSEEPARFSLGN 156

Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201
           I +  GRI + D      + +++L L +         P+ +D     V    +G  +   
Sbjct: 157 ISLSDGRIVVEDAAHGLRHDITELRLGVPFVS---NLPVKVDVF---VEPTLSGRVNGDP 210

Query: 202 SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261
            A        + ++    ++ L        +     L +  K  + SG  S +       
Sbjct: 211 LALSGRTKPFSDDRETVAELTLKNFELSPWL---AYLPFKPKFTVPSGTLSTS-IQLSFS 266

Query: 262 NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL-NFSEN 320
             E       L G   I+   + +     Q +        +         +         
Sbjct: 267 QPEGQQPLIALQGQIDIAG--LAVQEVGGQPVFAVEELGLELGDVQPLAGKWHFSRLRVI 324

Query: 321 GAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENF 373
             E       T          ++      D       +          ++ +F
Sbjct: 325 KPEVDLVRLTTGGLNVTALLPESAASAPADKTAKKGARPAAAEGSTAGSEVDF 377


>gi|329114605|ref|ZP_08243364.1| Hypothetical protein APO_1401 [Acetobacter pomorum DM001]
 gi|326696085|gb|EGE47767.1| Hypothetical protein APO_1401 [Acetobacter pomorum DM001]
          Length = 717

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 79/248 (31%), Gaps = 8/248 (3%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KEDGSFE 80
            V    D    +           G+ + + G + + ILPFP V  K +++    EDG   
Sbjct: 23  IVSATQDADWLKTRLADAVESSTGRHLTI-GQLHVWILPFPWVEAKGVKLSSVAEDGVNM 81

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILE 140
             I  +  R   LPL S  I   D+ +  P +     + G ++W                
Sbjct: 82  LDIGQVRARLALLPLFSHRIAFEDVSLISPQVQLRRLADGRADWHFTPQERQSSGGGASS 141

Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV-IAEGTGNFDN 199
                   + + D    Q   ++ L+          ++   +  + G+    +       
Sbjct: 142 SSGKMHWNLTVSDLSLTQA-QVAWLDAVHHRSGAFQVAEGKVKGLSGNAPDFDVKLRKGA 200

Query: 200 KRSAFKITANFPA---KNKAISLKIQLFPLAYPI-IIDLFGNLFWNEKQPIYSGVFSVAG 255
            + A                + L+I L    +P  +  + G++     Q +Y+     + 
Sbjct: 201 GQLALTGQTGPLLPMSAQLPMQLRISLTVNGHPAGLAHIDGSITDPRGQKVYALQIGGSV 260

Query: 256 DFSKLLNL 263
              + LN+
Sbjct: 261 AQLRDLNV 268


>gi|332878647|ref|ZP_08446366.1| hypothetical protein HMPREF9074_02109 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332683422|gb|EGJ56300.1| hypothetical protein HMPREF9074_02109 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 895

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/359 (10%), Positives = 100/359 (27%), Gaps = 21/359 (5%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58
           +++++    G    V+L     +P F      +E         +   +++   + I +  
Sbjct: 3   IVKKIFKWGGITLVVLLGAMVAIPYFF-KDTIKEKVIEMVNKNLKANLSLA-DVDISLFK 60

Query: 59  -LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
             P   +   D  +  KE   G      + + +      L++G   +    +       +
Sbjct: 61  SFPKAQITLSDFALVNKEPFVGDTLFAAKHIDVTLSVKDLMAGNYNLLGANVKDASAYIH 120

Query: 116 LSSKGVSNWF-----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
            + +G  N+                 + ++  +V+  +      + +    ++D+     
Sbjct: 121 FNKEGAGNFDIAIPSDTPEEESAPIKLDIQSYNVENLKFTFKMDDGNIFMEIADIYHSGK 180

Query: 171 ARFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
             F   +  L   +    +   + +   +      +       KN+  + K +       
Sbjct: 181 GNFAEEVLDLDTQTKANFTFAMDKSTFMNRVPITLQALLGIDLKNQKYTFK-ENKATVNR 239

Query: 230 IIIDLFGNLFWNEKQPIYSGVFS----VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
           + +   G +   E+   Y   FS       +F  L+  E S     +     ++      
Sbjct: 240 LDLVFNGFIQLLEEGQRYDLTFSTPTNTFQNFLALIPEEYSKSIENVKTTGNLTLKGFAK 299

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344
                  I         +   V   +      +         +N       + K N N 
Sbjct: 300 GDMVGDKIPTFGLEMFADNATVKYPDLPK---TIKDISIDLKVNNATGITNDTKVNLNK 355


>gi|162148057|ref|YP_001602518.1| hypothetical protein GDI_2273 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161786634|emb|CAP56216.1| conserved protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 827

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 78/260 (30%), Gaps = 22/260 (8%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG- 77
                   ID    R+          G+ + V G + + ILP+PSV  +D+ +     G 
Sbjct: 38  ATMAARAMIDPASLRQQAVAAVWRQTGRVLRV-GTLDVRILPYPSVSVRDLALSDMAGGA 96

Query: 78  -SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI-- 134
                   GL  R   LPLL  EIR+ D+ +  P L     + G +NW            
Sbjct: 97  RPDMLTATGLDARLAILPLLHHEIRLEDVRLTHPDLLVERMADGRANWQMHPQPDTAPAA 156

Query: 135 -----------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                        V +  + V+   +   D+++     ++   + +    L   +P    
Sbjct: 157 SNPGGSSHSARWAVRIGSVRVRDAVVTWDDRQAHGTGTVALDRVALDG--LTGSAPSFDV 214

Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP-IIIDLFGNLFWNE 242
                  A        +       ++ P K   + ++        P   + L G L    
Sbjct: 215 QGHRPADAGAGFTMQGQVGPLVTPSSDPWK---VRVQAAFLLDGQPGGSLGLDGALSDPA 271

Query: 243 KQPIYSGVFSVAGDFSKLLN 262
               Y             LN
Sbjct: 272 HLRGYDVTLHATAGQVSGLN 291


>gi|325983439|ref|YP_004295841.1| hypothetical protein NAL212_2894 [Nitrosomonas sp. AL212]
 gi|325532958|gb|ADZ27679.1| protein of unknown function DUF748 [Nitrosomonas sp. AL212]
          Length = 1088

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/355 (11%), Positives = 105/355 (29%), Gaps = 35/355 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-F 61
           +R+ I LG +  V+++ A  +  F      +   E + +  + + + V     I I P  
Sbjct: 13  KRLGISLGVIAIVIILLA-AISYFWLPGYAKSQLEIRLSEFLQRPVTVA---SIEIKPHT 68

Query: 62  PSVFFKDIRID----QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
             +     ++       E G        L +      L      +  + +  P       
Sbjct: 69  LELLVHGFQVGVKADSNEPGESLFSFNRLYIDLSIKSLKQRAPVITAIALTHPKFRLIRE 128

Query: 118 SKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
           +K   N                D      +  I ++ G  + ID+     + ++++NL I
Sbjct: 129 TKDQLNISDLLEKFSQPSDEKDDDGAQFSISNITIQEGHFEFIDRHMQTDHQITEINLGI 188

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
                  +      +++  +    +   +    A +         +  +L ++   +   
Sbjct: 189 P------VIANFDSALEHWIEPHFSARINGSPFALEGKLRPFTVPQEATLALKFNKIDLS 242

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
              +        +   + SG    +         +  A    L+G       N  + +  
Sbjct: 243 ---EFDRYAPLPQGIRLLSGFLD-SDLLVTFTQEQEQAPNIMLTG-------NTILHQLA 291

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344
           ++     +     N  +++     +    E  ++    +N+ +   E E +    
Sbjct: 292 IKDTTVAAPYR-TNVKELNIALTQVDLMREKPSQIKLKMNQVELTRESESEPALS 345


>gi|90411511|ref|ZP_01219522.1| hypothetical protein P3TCK_12801 [Photobacterium profundum 3TCK]
 gi|90327724|gb|EAS44067.1| hypothetical protein P3TCK_12801 [Photobacterium profundum 3TCK]
          Length = 1317

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/327 (12%), Positives = 107/327 (32%), Gaps = 14/327 (4%)

Query: 2   LRRVLIGLGFLF---SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58
           L+++            +++ G  +  + +D    R    +  T  + +   + G I++ I
Sbjct: 19  LKKIAKWASIGLLSPVILITGVLSYGVNLDLAPHRTYINQWLTNNLHRDAEIAGDIELEI 78

Query: 59  LPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
              P++  + + I   E            L  +   LPLL+  + +  +  +   LN   
Sbjct: 79  SFSPAIRLEGVMIGNIEAIPWQPMLTSGYLEAKISVLPLLNNTLEIDHLEFENIALNLAK 138

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
           ++ G++NW   +  + +  N   E        +    + SD      ++ L    +  N 
Sbjct: 139 TADGLTNWAFNEQPLPVNLNTNDENQDPSNSGLPFSLRLSD-SISAKNITLAYEDQTQNQ 197

Query: 177 ISPLSIDSIK----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
              L ++++      +   +  G+   +     +  +           ++         +
Sbjct: 198 YIGLFLENLNLTKPDTWQLDVKGHTMGQNYDLTLEGDLETLINEQQGLLKAKGEFAGAQL 257

Query: 233 DLFGN---LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-RLSGNFKISDGNVRISRY 288
           ++  N   L   E        +        LL L++       ++ +   S  +  I+  
Sbjct: 258 NIDANIVPLQQGESHATVQLDWQDTRPIEDLLGLDVKPIAPLSVNADVTASMNHFAITDL 317

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLL 315
            L S +  +  + D K  V   + +  
Sbjct: 318 TLTSPITQAKGNLDVKLDVPYTDGHNF 344


>gi|167578991|ref|ZP_02371865.1| hypothetical protein BthaT_12675 [Burkholderia thailandensis TXDOH]
          Length = 862

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 45/286 (15%), Positives = 85/286 (29%), Gaps = 25/286 (8%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66
           G+G L  +V+ G      F      R   E+Q +  + +   +    +I   P+   +  
Sbjct: 17  GIGVLIFLVVFGLLG--FFAAPPLIRHVAEQQLSRQLERPATIA---RIAFNPYTLRLEA 71

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125
             + + ++        I  L +RA +  L      V ++ +DQP            N+  
Sbjct: 72  DGVHVGERGGQGDFVDIGKLVVRASWTSLARFAPIVDEVRLDQPRFRIVRYDAQRFNFTD 131

Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                               +  I V  GRI   D+  +  + +    L I         
Sbjct: 132 LVDKFSKPSPQPSAKPVRFSVSNIQVNDGRIDFDDRLLNAKHVVDQWTLGIPFIATLPSK 191

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
                     V  +     D    A        A+++  S+ ++L  L  P ++      
Sbjct: 192 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKLDGLDVPRLLS---YA 242

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                  + SG  S +                R+SG   ++D  V 
Sbjct: 243 PTKLPVDVRSGKLS-SNLDVNFAMA-GDTPSLRVSGTVDLNDAQVT 286



 Score = 37.2 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 39/331 (11%), Positives = 92/331 (27%), Gaps = 59/331 (17%)

Query: 39  QATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG 98
           + +  +    A+ G     +    +V   D ++  +E+         + + A  L  L  
Sbjct: 254 KLSSNLDVNFAMAGD-TPSLRVSGTVDLNDAQVTSREN-EPLFAAHAVHVAAAQLEPLRN 311

Query: 99  EIRVFDMYIDQPHLNFYLSSKGVSNWF--------------------------------- 125
            +   D+ IDQP ++      GV N                                   
Sbjct: 312 VLHFDDIRIDQPVVSLARDKAGVLNVTKLAGGANGAPAATKAAAAKAAGASAGGLAGAAS 371

Query: 126 --------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
                             ++ +++  +  G + + D        +S           ++ 
Sbjct: 372 GASSAAAANADKEKAQPLDLTIKRFAINDGTLNLNDASLATPAAIS---------LTHVA 422

Query: 178 SPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + L+  ++ G   A  T   D     + K    F    +    K+ +  LA P+   +  
Sbjct: 423 TTLADFTLAGKTPARYTLATDVASGGSLKAEGAFSLAARQADTKLVVDALALPV---VQP 479

Query: 237 NLFWNEKQPIYSGVFSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
            L       +  G  S +    +      L A+ S       +    + +   K  +++ 
Sbjct: 480 YLAGATSARVLDGALSTSVNAKADWSKTPLDAQVS--DSELGLKSLKIALPNAKTPAVVL 537

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
             +  +  K  ++     + +    G     
Sbjct: 538 PDARVKVTKIDLAARTAEIASVDATGLALDV 568


>gi|332188398|ref|ZP_08390122.1| asmA family protein [Sphingomonas sp. S17]
 gi|332011544|gb|EGI53625.1| asmA family protein [Sphingomonas sp. S17]
          Length = 705

 Score = 97.3 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/336 (13%), Positives = 95/336 (28%), Gaps = 29/336 (8%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDF-REDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68
            +  ++++ A  + LF+    F R  FE     +  + + V G  +++  P+      + 
Sbjct: 28  GVGLLLVIAAIWLVLFVTKGRFLRHPFESVVGKLTHRTVTVGGDFQLYFAPWRIKFVAER 87

Query: 69  IRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126
           I I   +          + +  R   L LL G+ R   + +    ++   +    +N + 
Sbjct: 88  IAISNPDWASRPNLFTADRIDSRIAPLSLLFGKRRFTWLELTNGAVDLEWTPDHRTNSWT 147

Query: 127 RKSTMD--MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
                    +    ++  +V G  I+  D             ++++A             
Sbjct: 148 FSQKKGGKPLEFPRIDTANVTGTTIRYRDPR-----------MRVTADLALDDIRSQDAR 196

Query: 185 IKGSVIAEGTGNFDNKRSAFKIT-ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243
           I  +V   G G   +          +  A       ++     A   +ID+ G L     
Sbjct: 197 IGQAVGVRGKGVIRSTPFKLTAQLLSPDATANRGKNELIARMRAAGNVIDVAGTLPSIAD 256

Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYKLQSILPNSS 298
                      G     L   +     R     L           R +R        +  
Sbjct: 257 IENVPLRTRARGKDMSTLLDIIGVVIPRTRTYDLRAQMVKDGEAYRFTRMAGTFGDSD-- 314

Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334
                +  V+  +   L+          D+ +   F
Sbjct: 315 --LAGRLTVTNGQ--RLHLDSALTTKKLDIIDAAPF 346


>gi|209542673|ref|YP_002274902.1| AsmA family protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530350|gb|ACI50287.1| AsmA family protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 818

 Score = 97.3 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 78/260 (30%), Gaps = 22/260 (8%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG- 77
                   ID    R+          G+ + V G + + ILP+PSV  +D+ +     G 
Sbjct: 29  ATMAARAMIDPASLRQQAVAAVWRQTGRVLRV-GALDVRILPYPSVSVRDLALSDMAGGA 87

Query: 78  -SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI-- 134
                   GL  R   LPLL  EIR+ D+ +  P L     + G +NW            
Sbjct: 88  RPDMLTATGLDARLAILPLLHHEIRLEDVRLTHPDLLVERMADGRANWQMHPQPDTAPAA 147

Query: 135 -----------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                        V +  + V+   +   D+++     ++   + +    L   +P    
Sbjct: 148 SNPGGSSHSARWAVRIGSVRVRDAVVTWDDRQAHGTGTVALDRVALDG--LTGSAPSFDV 205

Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP-IIIDLFGNLFWNE 242
                  A        +       ++ P K   + ++        P   + L G L    
Sbjct: 206 QGHRPADAGAGFTMQGQVGPLVTPSSDPWK---VRVQAAFLLDGQPGGSLGLDGALSDPA 262

Query: 243 KQPIYSGVFSVAGDFSKLLN 262
               Y             LN
Sbjct: 263 HLRGYDVTLHATAGQVSGLN 282


>gi|149369724|ref|ZP_01889576.1| outer membrane assembly protein [unidentified eubacterium SCB49]
 gi|149357151|gb|EDM45706.1| outer membrane assembly protein [unidentified eubacterium SCB49]
          Length = 875

 Score = 97.3 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 49/383 (12%), Positives = 115/383 (30%), Gaps = 37/383 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI 58
           +++ L  LG    V+++     P       F++  E+     +   +        + + +
Sbjct: 1   MKKFLKILGIFLIVLVIALIAAPFL-----FKDSIEKIVKQTINDNVNATVAWESLDLSL 55

Query: 59  ---LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE---IRVFDMYIDQP 110
               P  ++   +  +       G   +  + + +      L   +   I++ ++Y++  
Sbjct: 56  IKSFPDAALTINNFSVINNAPFKGDTLASGKQVKLDMGITQLFKTQEEAIKINELYLEDS 115

Query: 111 HLNFYLSSKGVSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159
            +N  + +   +N+            +     +      L+   +K  RI  +D+ ++  
Sbjct: 116 FINIKVDANNNANYDIAIQDETNTAPETSQETEGGFTFDLQGYELKNARINYLDESTETY 175

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218
             LSD N      F      L  ++    +         +N +           +N+  +
Sbjct: 176 LMLSDFNHSGKGDFSASTLELDTNTDALVTYKMGDVAYLNNTKLTLDAVILMDLENQKYT 235

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFK 277
            K +       + + L G +  NE         +  + DF   L +   A  + L G   
Sbjct: 236 FK-ENEAKINQLPLALDGFIKINENNTELDITLNTPSSDFKNFLAVIPEAYVNNLDGVTT 294

Query: 278 ISDGNVR---ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD-LNETDF 333
             +  V            I         N       +      +        D LN+T  
Sbjct: 295 TGNFTVNGAIKGIVDDTYIPKFDIKIRSNNASFKYADLPK---TVENITINTDLLNQTGL 351

Query: 334 FEEEEKKNKNDDLKKDDIQYSVN 356
            ++          K DD  ++ N
Sbjct: 352 VKDTYVMLNGVSFKIDDELFTAN 374


>gi|254281724|ref|ZP_04956692.1| AsmA family protein [gamma proteobacterium NOR51-B]
 gi|219677927|gb|EED34276.1| AsmA family protein [gamma proteobacterium NOR51-B]
          Length = 664

 Score = 97.3 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 53/360 (14%), Positives = 106/360 (29%), Gaps = 22/360 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +  +L  +G L ++V+V  F +P+FID  +     +       G ++ V G     + P 
Sbjct: 1   MLVILWIVGALIALVVVALFLLPVFIDTNELVALADEMVGEATGGELRVLGEADFSVFPR 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIE----GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
            S+   +  +        ES+IE     L      LPLL+G   V  M +   ++     
Sbjct: 61  LSLNLGEATLTIPPADDTESRIEAKITQLDFGLAILPLLTGRTEVDAMNLSGVNVTIT-- 118

Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
                                L     +     +  +   +   ++   +  S   + + 
Sbjct: 119 -----EAVATPEIPVPDDLEDLSDREWEQLGRALRKEREAKRKEMTGATVVSSGLVVAVD 173

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKIT-ANFPAKNKAISLKIQLF-PLAYPIIIDLF 235
           + +  D     + + G    +     FK++  N   +   I  + +L  P A PI + + 
Sbjct: 174 AVVLEDVSLTLLDSSGKETLNVAIPLFKVSDVNTEERPITIDGRARLQSPDATPINLSID 233

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
           G++              V    ++L  +      S LSG   +   +             
Sbjct: 234 GDVRVASNLTDIK----VIAVNTRLTGVLSGPIDSTLSGAVTLLPLHADFDLTTALPGGS 289

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV 355
                       +  E   +  S        D           K     + + D    S 
Sbjct: 290 -----VSGDLTFAALESPQILVSFESESLNLDQLTPPASSASGKATPVTETEADSSSESA 344


>gi|71280785|ref|YP_268604.1| hypothetical protein CPS_1874 [Colwellia psychrerythraea 34H]
 gi|71146525|gb|AAZ26998.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
          Length = 1011

 Score = 97.3 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 65/400 (16%), Positives = 138/400 (34%), Gaps = 44/400 (11%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ ++     +F   + G F +PL +     +       T  + ++  +     I   PF
Sbjct: 14  IKAIIYSGIVVFLYAISGFFILPLIV-----KPLIIDTVTEKLERQAQLD---VIEFNPF 65

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             S+  K   I  K         + L++  +  PLL   I   ++ I++P ++  + + G
Sbjct: 66  TLSITLKGFSISGKH-TDKLLDFDLLTVNLQAFPLLQKTISFDEIIINKPEVSVIILANG 124

Query: 121 VSNWF-------------QRKSTMDMIHNVILEKIHVKGGRIKIID--QESDQVYFLSDL 165
             N+                ++T +    + ++K     G I   D  +E+   + + ++
Sbjct: 125 EFNFQDIILKNTALDSEVDSENTNEAAWILSIDKFRHNEGIINFSDQNRETAYHHTIKEI 184

Query: 166 -----NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK--NKAIS 218
                N    A   N+    +  S    +   G  +    +S+  I+   P K  +  + 
Sbjct: 185 NVALDNFSTKAGDNNMHLVKAKTSQGTELNWHGKFSLSPLKSSGDISFVSPLKIVSDYLQ 244

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278
            +I        + ++   +  +  +QP +     +A   +  +      KK   S    +
Sbjct: 245 QRILFNITEGSLKVNSHYDFNFAGEQPQFIINNLMASISALEIRSRDDNKKIITSDELSV 304

Query: 279 SDGNVRIS--RYKLQSILPNSSTDEDNKTKVS-QDEENLLNFSENGAESMHDLNET---- 331
               +  S  +  + SI    S    N+ K+S  D E L    +       D  E     
Sbjct: 305 DLEQLSSSDKKIVINSISNTGSFIAVNRNKLSQFDIEKLFILQQLNQSVSTDETEVSTES 364

Query: 332 -----DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHD 366
                +  + ++ K +N DL+   I  S N     D+S  
Sbjct: 365 STEKDEAVKHKDNKRENWDLEIKAISTSNNNIVINDSSVS 404


>gi|58040099|ref|YP_192063.1| hypothetical protein GOX1666 [Gluconobacter oxydans 621H]
 gi|58002513|gb|AAW61407.1| Hypothetical protein GOX1666 [Gluconobacter oxydans 621H]
          Length = 839

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/335 (13%), Positives = 99/335 (29%), Gaps = 42/335 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++   L  +   ++  +    + ID    RE          G  + V+    + +LP+
Sbjct: 1   MKKLTGVLIAVIVAIVGVSVATHVLIDQDALRERVAVALKHQTGLMMQVR-HSSVQLLPW 59

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+    D+ +  ++  +   K   +        LL  E+R  D  ++   +N      G 
Sbjct: 60  PAFEASDVVLT-RDGQTPVLKAHTIHAGIAVFALLHREVRFQDFVVEGATVNLVRGLDGQ 118

Query: 122 SNWFQRKSTMDMI----------------HNVILEKIHVKGGRIKIIDQESDQV------ 159
           +NW       +                   ++ L+ +HV    +   D+ +         
Sbjct: 119 ANWSLTPDRENEDASLPVHGQSGQRIQAHWDLSLDGLHVAQAAVIWNDRLTRTSGSFGLD 178

Query: 160 -------------YFLSDLNLQISARFLNIISPLSIDSIKGSVIAE-GTGNFDNKR---S 202
                          L   +          +  LS            GT   D ++    
Sbjct: 179 TLDLAGLRSSSPWISLQGHHAGTPFTLKGHVGNLSQIRGTQPWAFSIGTTLGDGEKRDWL 238

Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262
                   P++ + + L  Q           LF +       P   G  +V G    L +
Sbjct: 239 NLDGRIGNPSQMQNVVLTAQGEWPNLQDAHRLFPHANLPN-VPALGGDIAVQGSPGPLTD 297

Query: 263 LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297
           L+  A   ++ G+      ++      L+  +  +
Sbjct: 298 LDGDALLHQVLGSMNPMRVHLHAGYVALRQGVLRN 332


>gi|163857981|ref|YP_001632279.1| hypothetical protein Bpet3668 [Bordetella petrii DSM 12804]
 gi|163261709|emb|CAP44011.1| conserved hypothetical protein [Bordetella petrii]
          Length = 1181

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 90/298 (30%), Gaps = 30/298 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR    L    +V+L+        +     R         ++G+ + V G I  +     
Sbjct: 12  RRFGKILLATVAVILILFGVAAWQV-PKVLRSALTDDVAGLLGRPVRV-GDISFNPF-TL 68

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +V   D+ I+Q    S    I  L + A ++ L      V  + +++P +          
Sbjct: 69  TVRAHDLAIEQPGADSPLVDIGQLDVSASWMSLFWFAPVVDSVRVERPRIALVREDVTRF 128

Query: 123 NWF---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
           N+                  +     +    L  + ++ G I + D+ + +   + ++ L
Sbjct: 129 NFSDIQQKLADMAAAQPEPAQPDDGGLPRFSLNNLVLEDGAITLDDRVTGRKQQVDEIAL 188

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
            +        +          V        +         A    +  A +L ++   LA
Sbjct: 189 GVPFISTFGYAT------DIDVQPSVHMRINGSPFDLDGVARPFDEVPASTLNVKFTGLA 242

Query: 228 YPIIIDLFGN-LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                D +   L    ++ +      V            +A   R+ G+  +   ++R
Sbjct: 243 LENWADAWPMPLPIKVERALLDSDLRVV-----FEQPRDAAPTIRVVGDLGLRQLDLR 295


>gi|329119470|ref|ZP_08248155.1| hypothetical protein HMPREF9123_1584 [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327464403|gb|EGF10703.1| hypothetical protein HMPREF9123_1584 [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 728

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/380 (11%), Positives = 110/380 (28%), Gaps = 32/380 (8%)

Query: 2   LRRV------LIGLGFLFSVVLVGA----FTVPLFIDWTDFREDFERQATLIVGKKIAVK 51
           ++R+      L  L     +   G       +         R+  +       G+K+   
Sbjct: 1   MKRLQSGKFWLKSLTAAVLLFAAGFAAQHLLLAWLFSPEKLRQAADAAV-AGTGRKVRFV 59

Query: 52  GGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111
              +  + P P+V  K + I +    + E + E + +   +   L GE R+    + +P 
Sbjct: 60  DEGRTTVFPRPTVTLKQVEITRAHGEAAEIRAEEMRLGIGWGS-LWGEPRIEKWVLLRPE 118

Query: 112 LNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
           L+    + G  N     +         +++I V+ GR+ +   E  + + L +++L ++ 
Sbjct: 119 LSLSRDAAGKWNVADLLAKESR---FAVDRIIVEDGRLLLDTPE--RRHTLENVSLNVNN 173

Query: 172 RFLNIISPLSIDSIKGSV-----IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
                    +   +K  +       +  G  +     +++          ++++      
Sbjct: 174 ADDAQTQIKAAGRLKTPLWENDAEWKLQGTLNRNAQGWRMP--------ELAIEGGSKWR 225

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
                     +  W           +          + L+A+   L  +          +
Sbjct: 226 GAAFSFRFAADAAWRRDSGKARFSKAALKLDIPDYEMHLNAESPALEADGDSLTAAAANA 285

Query: 287 RYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
               +          D K   V  D  +       G+    D   T F  +     +   
Sbjct: 286 VLTAKYGGAAWDGTLDAKNIGVWPDRASAEQIGLKGSRKT-DATHTAFTLDTPLAWRKGG 344

Query: 346 LKKDDIQYSVNKKEEKDNSH 365
            +    + +   +    N  
Sbjct: 345 WEMPAAKLTTRMENAAGNPR 364


>gi|258542796|ref|YP_003188229.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256633874|dbj|BAH99849.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636933|dbj|BAI02902.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639986|dbj|BAI05948.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256643042|dbj|BAI08997.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256646097|dbj|BAI12045.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256649150|dbj|BAI15091.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256652137|dbj|BAI18071.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256655194|dbj|BAI21121.1| lipopolysaccharide biogenesis periplasmic protein AsmA [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 718

 Score = 96.9 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 79/257 (30%), Gaps = 25/257 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ-KEDGSFE 80
            +    D    +           G+ +++ G + + ILPFP V  KD+++    EDG   
Sbjct: 23  IISATQDADWLKTRLADAVESSTGRHLSI-GQLHVWILPFPWVEAKDVKLSSVAEDGVNM 81

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI------ 134
             I  +  R   LPL S  I   D+ +  P +     + G ++W                
Sbjct: 82  LDIGQVRARLALLPLFSHRIAFEDVSLISPQVQLRRLADGRADWHFTPQERQSSIGGSSS 141

Query: 135 -------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI-ISPLSIDSIK 186
                   N+ +  + +   ++   D    +         ++     N     + +    
Sbjct: 142 ASSGKMHWNLTVSDLSLTQAQVAWDDAVHHRSGAFQVAEGKVKGLSGNAPDFDVKLRKGA 201

Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
           G +   G                       + + + +      +   + G++   + Q +
Sbjct: 202 GQLALTGQT---GPLLPMSAQLP-----MQLRISLTVNGHPAGL-AHIDGSITDPQGQKV 252

Query: 247 YSGVFSVAGDFSKLLNL 263
           Y+     +    + LN+
Sbjct: 253 YALQIGGSVAQLRDLNV 269


>gi|332883872|gb|EGK04152.1| hypothetical protein HMPREF9456_01180 [Dysgonomonas mossii DSM
           22836]
          Length = 884

 Score = 96.9 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 46/366 (12%), Positives = 112/366 (30%), Gaps = 30/366 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-- 59
           +++ L   G +  V++V    +P        +      A   +   + +K    +++   
Sbjct: 1   MKKALTIAGVVIVVLIVAMIAIPFLF-KDKIKTAVLNAANEKLNATVDIK-DFGLNLFSN 58

Query: 60  -PFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
            P  ++   D  +    D         +  S+  + + L   E  +  + +D+  +   +
Sbjct: 59  FPNATLSLNDASVVGVGDFQKDTLLSAKSASVTIDLMSLFGSEYNISKINLDKASVYTKV 118

Query: 117 SSKGVSNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
              G +NW            +  +    + L+KI V        +  +     L+  N  
Sbjct: 119 LEDGRANWDIMKADSTASASTESESAFKLNLKKITVNDCSFVYQNDSTKMKVTLNKWNGD 178

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
           +   F    + L+ +S  G V    T   D          N        ++   L  + +
Sbjct: 179 LHGDFSAGETTLNTNSTIGEV----TFVMDGIPY-----LNKIQGVADATINANLDKMEF 229

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL--NLELSAKKSRLSGNFKISDGNVRIS 286
                   NL  N+ +    G F++ G   + +  +L+L+A  ++      +    +  +
Sbjct: 230 AFK---ESNLQLNDLKASIDGTFAMVGKDYEDMEFDLKLNAPDTQFKDILSLVPA-MYTA 285

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346
            +K       +  +   K  +  D     +      ++M                   + 
Sbjct: 286 DFKDVKTSGTAKLEAYIKGLMHGDSYPAFDVKIIVNDAMFQYPSLPKAVNNINVAMAINS 345

Query: 347 KKDDIQ 352
           K   + 
Sbjct: 346 KGGSLD 351


>gi|322420237|ref|YP_004199460.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
 gi|320126624|gb|ADW14184.1| OmpA/MotB domain protein [Geobacter sp. M18]
          Length = 1153

 Score = 96.9 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/311 (9%), Positives = 88/311 (28%), Gaps = 18/311 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R  + +  +F   ++       F+     +    ++      +++ + G + I+   +
Sbjct: 1   MKR-WMWVSLIFVGSVLCLAGFVAFLLPEILKSQVMQRVEAATSRRLEI-GELSINPFTW 58

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            +   +D+R  +              +    + +      V   ++  P L    +    
Sbjct: 59  -TFEIRDLRFSELRSRETFLTFSSARIAMSPMSVFRRAPIVASAHLASPRLRIVRTGANS 117

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLNLQIS-----ARFL 174
            N+      +     + +  + +  G +  ID+    ++ + L  + L +          
Sbjct: 118 YNFSDLLKWLPKHPRLSVNNLTIGNGSLDFIDRGLAVEKHHELRKIELAVPFVTTIPYLA 177

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID- 233
                  + ++         G       A + T     K  A+   +   P   P+    
Sbjct: 178 KRYVAPRLSALVNGSPVYLEGKLRPFPRAVEATVTLDLKEVALPYYLAYLPRELPVRAAS 237

Query: 234 -------LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
                      L   ++ P  +   +      KL +   +           I        
Sbjct: 238 GRLSARVALSYLAAQKRNPELALSGNATLADLKLADRTGAPFLEARRLGAVIDRARPLTG 297

Query: 287 RYKLQSILPNS 297
            + L S+  ++
Sbjct: 298 EFDLSSLSADA 308


>gi|54301946|ref|YP_131939.1| hypothetical protein PBPRB0266 [Photobacterium profundum SS9]
 gi|46915366|emb|CAG22139.1| hypothetical protein PBPRB0266 [Photobacterium profundum SS9]
          Length = 999

 Score = 96.9 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 44/342 (12%), Positives = 106/342 (30%), Gaps = 18/342 (5%)

Query: 2   LRRVLIGLGFLF---SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58
           L+++       F    +++ G     + +D    R    +  T  + +   + G I++ I
Sbjct: 19  LKKIAKWASIGFLSPVILITGVLRYGVNLDLAPHRAYINQWLTDNLHRDAEITGDIELEI 78

Query: 59  LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
              P++  + + I   ED           L  +   LPLL+  + +  +  D   LN   
Sbjct: 79  SFSPAIRLEGVMIGNIEDIPWQPMLTSGYLEAQISVLPLLNNTLEIDHLEFDNIALNLAK 138

Query: 117 SSKGVSNWFQ---RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
           ++ G++NW        +     NV  +        +    + SD      ++      + 
Sbjct: 139 TADGLTNWEFNKQPSPSSTSSLNVNDKSQAPSNSGLPFSLRLSD-SISAKNITFAYEDQS 197

Query: 174 LNIISPLSIDSIK----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
            N    L ++++      +   +  G+   +     +  +           ++       
Sbjct: 198 QNQYIGLFLENLNLTKPDTWQLDVKGHTMGQDYDLTLNGDLENLINEQQGSLKAKGEFAG 257

Query: 230 IIIDLFGN---LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-RLSGNFKISDGNVRI 285
             +++  N   L   E        +        LL L++       ++ +   S  +  I
Sbjct: 258 AQLNIDANIVPLQQGESHATVQLDWQDTRPIEDLLGLDVKPIAPLSVNADITASMNHFSI 317

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLL-NFSENGAESMH 326
           +   L S +  +    D K  V   + +       +      
Sbjct: 318 TDLALTSPITQAKGYLDVKLDVPYTDGHNFIEGQLDVPLIDL 359


>gi|330891674|gb|EGH24335.1| AsmA family protein [Pseudomonas syringae pv. mori str. 301020]
          Length = 686

 Score = 96.5 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/379 (10%), Positives = 98/379 (25%), Gaps = 73/379 (19%)

Query: 53  GIKIHILPFPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111
            I   + P+  +   D  +          + ++ L +    LPLL  ++++ D+ ++  +
Sbjct: 1   DIGWSLFPWLGLELHDAHVATLTAPDQPFADVQMLGLSVRVLPLLRRQVQMSDIRVEGLN 60

Query: 112 LNFYLSSKGVSNWFQ------------------------RKSTMDMIHNVILEKIHVKGG 147
           L  +    G  NW                          +         + ++ + V   
Sbjct: 61  LTLHRYENGHGNWEDIGKPAVASTETSGETTPAPAPDAPKADRPSQPIRLDIDSLTVNNA 120

Query: 148 RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS--------IKGSVIAEGTGNFDN 199
           R+   D    + +    + L           P+ + +        ++      G    D 
Sbjct: 121 RVDYSDARKGRTFMAESIQLSTGPIREASDIPIKLTAFLSTNQPVVRAKTELVGELRMDR 180

Query: 200 KRSAFKI---TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ------------ 244
               ++      +       +  K   F     +++DL  N+                  
Sbjct: 181 VLKRYQFEDMRLSGEVAGGPLQGKTVTFSAQGQLLVDLAANIAEWNSLKVSANQLRALGE 240

Query: 245 ---------PIYSGVFSVAGDFSKLLNLELSAKKSRLS----------GNFKISDGNVRI 285
                    P  SG  S+A    +     +      +S               +  ++ +
Sbjct: 241 LRARDLDKTPQISGGLSIAQLDLRTFFENIGQPLPAMSEGALSKVEMVTRLAGTPTSLAL 300

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE--KKNKN 343
               L+       +    +  V    +  L     G     D       EE +  K  + 
Sbjct: 301 ENLNLKV----DDSTFAGRIAVDDFAKQALRVQLKGDTFDADRYRPAESEESKGAKAARK 356

Query: 344 DDLKKDDIQYSVNKKEEKD 362
            +++  +   +       +
Sbjct: 357 SEVQSGEAAAAAGDSPLPE 375


>gi|109899851|ref|YP_663106.1| hypothetical protein Patl_3550 [Pseudoalteromonas atlantica T6c]
 gi|109702132|gb|ABG42052.1| protein of unknown function DUF748 [Pseudoalteromonas atlantica
           T6c]
          Length = 1074

 Score = 96.5 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 49/403 (12%), Positives = 121/403 (30%), Gaps = 47/403 (11%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFK 67
           +     +  +    +   I     +       +   G+ + ++   KI I PF   V   
Sbjct: 19  IATYLVIAYLLYALILGVITPLVLQSQLPSVLSEKTGRDVNIE---KIRINPFLLRVRVT 75

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNFYLSSKG---VSN 123
           +I+I+++       ++  L + A F   L      V  ++I++P+ +   ++ G     N
Sbjct: 76  NIQINEQASNEPFVRVALLELDAGFWQSLLHLTPAVEHVFIEKPYAHVARTAGGDNTRFN 135

Query: 124 W--------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
           +               Q       I ++ L    +  G + + D+ +       +L  ++
Sbjct: 136 FTGMIEALSQNGDKQPQEDEATSEIPHIRLGLFRLSNGHVMLSDKVTGTQINYPELGFEL 195

Query: 170 SARFLNIISPLS-----------------IDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212
           +         +                  +    G+V  +G           KI     A
Sbjct: 196 TDLDTLASITVPATKRDALLPENHYAFTLLTDEGGAVHLDGQFQLSPVDVKGKIELESIA 255

Query: 213 KNKAISL-KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR 271
                 L    +       ++DL  N    +         + A      L +  +  + +
Sbjct: 256 LPPLWPLSNALMAAKLTSGLLDLNLNYAVTQGDSDMHLQVNRAQLRVSDLTMSDATSQPK 315

Query: 272 LS-GNFKISDGNVR--ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328
           ++     I+D  +     +  + SI  +       +  + ++  +L+             
Sbjct: 316 INIAGIHINDFELDTATQQIDINSIRIDEPWF---EASLDKNGVDLVAL-LTPKSETSSA 371

Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371
           +  +F  E   + K     + + +    +  E  N    E+Q 
Sbjct: 372 SNAEFNTESIAEPKTKPQSEPEPEAKTAQGTEPQNESRTESQA 414



 Score = 41.0 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 37/323 (11%), Positives = 76/323 (23%), Gaps = 19/323 (5%)

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
              + +          K + + +             +  +  D+P     +     +N  
Sbjct: 562 VSALVVTDGPKQEPLLKWQDMQVAGIQYDSQKRAFSLQKIAFDKPFAKLVIDKDKNTNIS 621

Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
                      +                  SDQ   L              +   S    
Sbjct: 622 DLVVQQAANDGITEHAPATDDSSDTAHQ--SDQQTSLETAPAMAINIGEIRLLGGSAYFE 679

Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
             S+      + +    +    ++       + +  ++   A    + L G +    +  
Sbjct: 680 DNSLRPRFASSIEALNGSIAGLSSSADNPAEVDIAGKIDGYA---PVALNGAINPLLEDM 736

Query: 246 IYSGVFSVAGDFSKLLNLELSA--------KKSRLSGNFKISDGNVRISR-YKLQSILPN 296
                FSV+G     +N                 L   + + D  +R      +  +   
Sbjct: 737 FLDLNFSVSGAELTSVNPYSGTYMGHFIDRGLLSLDVKYSLQDNQLRGDNHVVIDQLTLG 796

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGA-----ESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
             TD D    +       L    +G      E   DLN   F           +L    +
Sbjct: 797 RKTDSDQALSLPLGLAIALLQDSDGVIDLGMEVSGDLNNPSFGFGSIILKALGNLITKAV 856

Query: 352 QYSVNKKEEKDNSHDKENQENFS 374
               +       S D+ N+  FS
Sbjct: 857 TAPFSLLANLVGSDDELNEVAFS 879


>gi|330448706|ref|ZP_08312354.1| asmA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328492897|dbj|GAA06851.1| asmA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 1324

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 44/372 (11%), Positives = 109/372 (29%), Gaps = 16/372 (4%)

Query: 14  SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73
            +   G     + ID T+ R D  +  +  + ++  + G + + +   P +   D+ I  
Sbjct: 47  IIAATGVLAYGVKIDLTEHRHDINQWLSSTLDRETTIGGDMSLTLSFSPEIELSDVTIAN 106

Query: 74  --KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM 131
                     K   +  +   LPLLS  +++  + +    L+    ++G  NW   K   
Sbjct: 107 TKAMKWEPMLKSGYIGAKISVLPLLSHTLKIDYLDLKDTSLHLVKDNQGNPNWMFGKDPQ 166

Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA 191
                   +       ++ + +        +  L+ Q + ++ N+       +     + 
Sbjct: 167 AKPK----QSTSSTPFKLALSNNIQADKVAVDYLD-QQTGQYTNVYLEQLALTKPDKWLL 221

Query: 192 EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
           +  GN         +  +  +       K+          +++  ++             
Sbjct: 222 QAKGNAMGNDYDVSLAGDLESLINEQQGKLDATGSFAGAKLNINADIHPFRSNTPSKANV 281

Query: 252 SVAGDFSKLLNLELS-----AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
            +    +  L   L      A    L+     S   + ++   L S + ++    D    
Sbjct: 282 KLDWVDTAQLESLLDIDLRHAAPMSLTTQITASSKGISLADIALTSPITSAKGFLDISLA 341

Query: 307 VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHD 366
            +    N +N   N            + + +              Q S  +K        
Sbjct: 342 QNAKALNHINGKLNIPLIDL----RPWLQPQPPVMYGVGYAAAAPQQSPLQKALDQWLVK 397

Query: 367 KENQENFSGDKM 378
            E   + S D++
Sbjct: 398 TETHLDLSIDEI 409


>gi|78224025|ref|YP_385772.1| hypothetical protein Gmet_2829 [Geobacter metallireducens GS-15]
 gi|78195280|gb|ABB33047.1| protein of unknown function DUF748 [Geobacter metallireducens
           GS-15]
          Length = 1200

 Score = 96.1 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 106/335 (31%), Gaps = 30/335 (8%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP- 62
           ++LIG   +F ++L        F+     +    R      G+K+++     + I PF  
Sbjct: 6   KILIG-CGIFLLILAAFTA---FVLPGMVKGRAIRAVEEATGRKLSIG---AVSINPFTW 58

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +   + +R+ +++  +  +      +      +  G   V +  +  P+++   +     
Sbjct: 59  NAEVRGMRLTERDGTTTFASFSSARVAVSPASIFRGAPIVSEARLRSPYVHLVRTGANAY 118

Query: 123 NW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLNLQISAR 172
           N+         +            +  I V  G I  IDQ    ++ + +S L L +   
Sbjct: 119 NFSDILEKKGPENPQPKKERARFSVSNIAVTNGSIDFIDQGLAVEKRHRVSGLELGVPFV 178

Query: 173 FL-----NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
                  +I       ++         G      SA + + +   K+  I   +   P  
Sbjct: 179 STIPHYADIYIAPRFRAVVNGSPLVLDGKLRPFTSAAEYSLDVNLKDLDIPYYLAYVPAK 238

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
            P+ ++  G           +  + +  + +  L +      + L            + R
Sbjct: 239 LPVRVE-RGTAA-----TKLALTYRIDANKNPELVMTGELSLANLKAAGADGAPLAALDR 292

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA 322
             +            + T V+ D   + + + +G 
Sbjct: 293 LGVMIGKSELLAPAISLTSVTLDG-PVFHLARDGK 326


>gi|207743948|ref|YP_002260340.1| hypothetical protein RSIPO_02131 [Ralstonia solanacearum IPO1609]
 gi|206595350|emb|CAQ62277.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
          Length = 1262

 Score = 96.1 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 41/331 (12%), Positives = 98/331 (29%), Gaps = 33/331 (9%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFK 67
           +G    + L     +             E Q +  + + + V    KI + P+   +   
Sbjct: 50  IGLGVLIFLAVFGLLGGVGGPPLLHHLAETQLSKYLERPVTVG---KIRLNPYTLRLEID 106

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-- 125
            + I +++  +    I  L + A +  +      + ++ +D P +    +++   N+   
Sbjct: 107 QLHIAERDGTTPFVDIGHLHVNAAWSSIFRRAPVIEELTVDAPRVRIVRTAEQRFNFSDI 166

Query: 126 ---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
                      K   +     +   + +  G I+ +DQ     + +  L + +       
Sbjct: 167 VDRLTRPEIPPKPKSNEPARFLFANLRLNNGAIQFVDQPLGAQHTVDGLQIGVPFL---A 223

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
             P  +D     ++A      D     F       A++   SL I+L  L  P  +   G
Sbjct: 224 SLPADVDIFVQPLLA---ARIDGAPLHFAGKTKPFAQSLESSLNIKLDGLDLPRYL---G 277

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
            +       I  G  +           +      R+ G   + +  V             
Sbjct: 278 YVPGPLPVAIPQGKLTTD-LTIDFQKPKTGNPVLRVHGTAGLDNLEVT--------DAGK 328

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
           +      + + +  +   L+   +      D
Sbjct: 329 APLVATKQLRATLSDVRPLDNVYHLDALSLD 359



 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/278 (9%), Positives = 85/278 (30%), Gaps = 33/278 (11%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +    ++ +      +     + L      +  L     +  + +D   ++   ++ G  
Sbjct: 315 TAGLDNLEVTDA-GKAPLVATKQLRATLSDVRPLDNVYHLDALSLDGVRVDATRAADGSI 373

Query: 123 NWF---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV--YFLSDL 165
           N+                   +      +V + K+ +    I+  D  +       L DL
Sbjct: 374 NFARLGGKPAPVEAKPAPSTPAAQPKPLDVAVGKLQLANSSIRWRDATTQPAADLVLDDL 433

Query: 166 NLQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKI 221
           +  ++ R L   + L + +     G++  +G+ + D +    ++  +          L+ 
Sbjct: 434 HGDVAVRTLGGPTTLDVGAKLASGGTLNVKGSTSLDKRTGELELKLDAIKLAAVEPYLRQ 493

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSG----------VFSVAGDFSKLLNLELSAKKSR 271
              P      +   G +        ++             ++A        L     +  
Sbjct: 494 AGAPQLQNGALSADGKIALEFGADTFNVRAEPLVATLADLALAPATRNDTALRAKQLRVD 553

Query: 272 LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
           +  NF ++   + ++  +  ++  +    +D  T ++ 
Sbjct: 554 VK-NFDLASRTLALNEVRSDALQLDVLRKQDGSTVLTL 590


>gi|83749101|ref|ZP_00946106.1| probable transmembrane [Ralstonia solanacearum UW551]
 gi|83724222|gb|EAP71395.1| probable transmembrane [Ralstonia solanacearum UW551]
          Length = 1262

 Score = 96.1 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 41/331 (12%), Positives = 98/331 (29%), Gaps = 33/331 (9%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFK 67
           +G    + L     +             E Q +  + + + V    KI + P+   +   
Sbjct: 50  IGLGVLIFLAVFGLLGGVGGPPLLHHLAETQLSKYLERPVTVG---KIRLNPYTLRLEID 106

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-- 125
            + I +++  +    I  L + A +  +      + ++ +D P +    +++   N+   
Sbjct: 107 QLHIAERDGTTPFVDIGHLHVNAAWSSIFRRAPVIEELTVDAPRVRIVRTAEQRFNFSDI 166

Query: 126 ---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
                      K   +     +   + +  G I+ +DQ     + +  L + +       
Sbjct: 167 VDRLTRPEIPPKPKSNEPARFLFANLRLNNGAIQFVDQPLGAQHTVDGLQIGVPFL---A 223

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
             P  +D     ++A      D     F       A++   SL I+L  L  P  +   G
Sbjct: 224 SLPADVDIFVQPLLA---ARIDGAPLHFAGKTKPFAQSLESSLNIKLDGLDLPRYL---G 277

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
            +       I  G  +           +      R+ G   + +  V             
Sbjct: 278 YVPGPLPVAIPQGKLTTD-LTIDFQKPKTGNPVLRVHGTAGLDNLEVT--------DAGK 328

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
           +      + + +  +   L+   +      D
Sbjct: 329 APLVATKQLRATLSDVRPLDNVYHLDALSLD 359



 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/278 (9%), Positives = 85/278 (30%), Gaps = 33/278 (11%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +    ++ +      +     + L      +  L     +  + +D   ++   ++ G  
Sbjct: 315 TAGLDNLEVTDA-GKAPLVATKQLRATLSDVRPLDNVYHLDALSLDGVRVDATRAADGSI 373

Query: 123 NWF---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV--YFLSDL 165
           N+                   +      +V + K+ +    I+  D  +       L DL
Sbjct: 374 NFARLGGKPAPVEAKPAPSTPAAQPKPLDVAVGKLQLANSSIRWRDATTQPAADLVLDDL 433

Query: 166 NLQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKI 221
           +  ++ R L   + L + +     G++  +G+ + D +    ++  +          L+ 
Sbjct: 434 HGDVAVRTLGGPTTLDVGAKLASGGTLNVKGSTSLDKRTGELELKLDAIKLAAVEPYLRQ 493

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSG----------VFSVAGDFSKLLNLELSAKKSR 271
              P      +   G +        ++             ++A        L     +  
Sbjct: 494 AGAPQLQNGALSADGKIALEFGADTFNVRAEPLVATLADLALAPATRNDTALRAKQLRVD 553

Query: 272 LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
           +  NF ++   + ++  +  ++  +    +D  T ++ 
Sbjct: 554 VK-NFDLASRTLALNEVRSDALQLDVLRKQDGSTVLTL 590


>gi|332286872|ref|YP_004418783.1| putative secreted protein [Pusillimonas sp. T7-7]
 gi|330430825|gb|AEC22159.1| putative secreted protein [Pusillimonas sp. T7-7]
          Length = 861

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/341 (13%), Positives = 104/341 (30%), Gaps = 17/341 (4%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++RVLI L  +F V LVG     L  D   ++   E        + + +KG I++ + P 
Sbjct: 1   MKRVLISLVVVFLVALVGIAIFLLTFDPNAYKNKLEEVVYNRYQRSLIIKGDIELSLFPR 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             +  +D+ +  +      + I+         PL+   + V  + +           +G 
Sbjct: 61  IGLSVEDVALSNRNSTDTFASIDSARFAVAIWPLMFNRLVVDHVAVTGFKAWVTRDEQGQ 120

Query: 122 SNW---FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
            N+     R      +    L    +                 +S      S++  ++  
Sbjct: 121 FNFRDLVDRPGAALGMMAPALAAKSLLPSARAETVPADRPPTVVSSAYAADSSQGTDLQI 180

Query: 179 P---LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
               L + + +       +G    +    ++       N+A  + ++   +      D  
Sbjct: 181 DIAGLDLKNGEIHFYDNVSGAV-GRIEKLEVNTGRMTANQAFDVALKGKLVGEYPEADAN 239

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELS--AKKSRLSGNFKISDGNVRISRYKLQSI 293
                          +S          L     AK + L GN   S  +  +S   L+ +
Sbjct: 240 IEGQALVLFNPEQKSYSAQKINVVANGLLGPLVAKSATLRGNLAYSAYSQMLSASNLELL 299

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334
           +     D + +T            S +  +   D ++ +  
Sbjct: 300 V---QGDIEGET-----PIKGFETSLSVPQLKVDRSQAELK 332


>gi|167617094|ref|ZP_02385725.1| hypothetical protein BthaB_12383 [Burkholderia thailandensis Bt4]
          Length = 885

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 86/287 (29%), Gaps = 27/287 (9%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66
           G+G L  +V+ G      F      R   E+Q +  + +   +    +I   P+   +  
Sbjct: 17  GIGVLIFLVVFGLLG--FFAAPPLIRHVAEQQLSRQLERPATIA---RIAFNPYTLRLEA 71

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125
             + + ++        I  L +RA +  L      V ++ +DQP            N+  
Sbjct: 72  DGVHVGERGGQGDFVDIGKLVVRASWTSLARFAPIVDEVRLDQPRFRIVRYDAQRLNFTD 131

Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                               +  I V  GRI   D+  +  + +    L I         
Sbjct: 132 LVDKFSKPSPQPSAKPVRFSVSNIQVNDGRIDFDDRLLNAKHVVDQWTLGIPFIATLPSK 191

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN- 237
                     V  +     D    A        A+++  S+ ++L  L  P ++      
Sbjct: 192 TDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKLGGLDVPRLLSYAPTR 245

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
           L  + +    S    V         +       R+SG   ++D  V 
Sbjct: 246 LPVDVRSGKLSSNLDV------NFAMAGDTPSLRVSGTVDLNDAQVT 286


>gi|94497865|ref|ZP_01304431.1| hypothetical protein SKA58_17393 [Sphingomonas sp. SKA58]
 gi|94422754|gb|EAT07789.1| hypothetical protein SKA58_17393 [Sphingomonas sp. SKA58]
          Length = 720

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 51/382 (13%), Positives = 102/382 (26%), Gaps = 30/382 (7%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFK 67
           +   F  +L   + +         +  FE      + +++ V G  +++  P       +
Sbjct: 40  IAIAFVGILFAIWLILFVTKGRFLKRPFEHVVGNSLNRQVRVDGDFQLYFAPITVKFLAE 99

Query: 68  DIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYLSSKGVSNW 124
            IR+            + + +  R   L L+ G+ +RV  + +    ++   S     N 
Sbjct: 100 GIRVSNTSWASRPDIFRADRIDSRIAPLSLIFGDKVRVRWLELRNGAVDLEWSRDHQHNT 159

Query: 125 FQRKSTMDMIHNVIL---EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           +           + L    +  + G  ++  D             +Q+            
Sbjct: 160 WTFGDPGKKGKPLNLPLVSRALLTGTTLRFRDPR-----------MQLGVDIGFDTVKAR 208

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKIT-ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
                  V   G G       A K    +          ++     A    +D+ G L  
Sbjct: 209 DTQFTSEVRFAGDGTMRALPFALKGGLLSPDQTVTGGRNQLAARMEAGATRVDVSGTLPG 268

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRISRYKLQSILP 295
             +           G     L   L          R + +        R +  K +    
Sbjct: 269 ATQLEGSDLQMVAQGRNLARLFDFLGIVIPPTRTYRFTSDLTKVGEEWRFTHLKGRFGDS 328

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNET-DFFEEEEKKNKNDDLKKDDIQYS 354
           +       +  VSQ  E  L    + A    D+ +   F   + +K  +          S
Sbjct: 329 D----LAGRFTVSQPGERTL-IKGDLATQKLDIIDVGPFIGYDPEKLASQGAGGAIETVS 383

Query: 355 VNKKEEKDNSHDKENQENFSGD 376
              +   D     E   NF  D
Sbjct: 384 GTPRVLPDTPLRVEAIRNFDAD 405


>gi|238021969|ref|ZP_04602395.1| hypothetical protein GCWU000324_01874 [Kingella oralis ATCC 51147]
 gi|237866583|gb|EEP67625.1| hypothetical protein GCWU000324_01874 [Kingella oralis ATCC 51147]
          Length = 809

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/380 (13%), Positives = 127/380 (33%), Gaps = 27/380 (7%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65
           L+    +  V L G+  +    +    ++   R+A     + +     I+  + P P++ 
Sbjct: 3   LVACLIVAGVYLGGSAALYRVSEHEALQQR-AREALAGTKRTVQFDAQIERSLFPRPTII 61

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
             ++ + + +  +   + + + +   +  L+S E  +  + ++  H     +++G  N  
Sbjct: 62  LHNVVLSEADGKAPALRAQEVKIGIGWSSLIS-EPTIEKLVLNDVHALLIRNNQGRWNIA 120

Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
               T +    V   ++ +  G + + D E  + +  S ++L + AR  +      +++ 
Sbjct: 121 DLWQTRNQRPAV-FNRVQINRGTLIVRDAEQGE-FAFSQISLAL-ARQNDTTIGYQLEAQ 177

Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
             S   E   N     +   I++    +   +++K       Y     L  N  W E+  
Sbjct: 178 AQSPYWE---NLQLAAAGDTISSPNSQQFPKLAVKFNGKENGYTFSGSLKTNATWREQ-- 232

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
            +    S     S   N   +   ++L+  +        I+        PN  T      
Sbjct: 233 DFIAENSKLEIASYRHNSTFNISITKLASRY-GDTKLTGINAVFTAPGHPNQPTGTLAAA 291

Query: 306 KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL-----------KKDDIQYS 354
           +    +        +  E   DLN  +  ++    N   +L           K   I   
Sbjct: 292 QAQWQDN-----ELHSDEINLDLNTRNAQQDNLDINAKSELIWRNGSGIQLGKLKFISTQ 346

Query: 355 VNKKEEKDNSHDKENQENFS 374
              +     + + E   NF+
Sbjct: 347 TTPQGTPRFASEMEGSLNFA 366


>gi|34498780|ref|NP_902995.1| hypothetical protein CV_3325 [Chromobacterium violaceum ATCC 12472]
 gi|34104631|gb|AAQ60989.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 716

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/326 (12%), Positives = 97/326 (29%), Gaps = 18/326 (5%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE 84
              D    R           G+ + + G I   + P P +  + + I         +++E
Sbjct: 33  WQFDEAAVRSSLTHALQD-TGRSVRIDGRITPQVFPSPGIEIEKLSISDPGKPDAFARVE 91

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-KSTMDMIHNVILEKIH 143
            L +   ++PLL G   V  + +  P         G  N     +      + + L+++ 
Sbjct: 92  MLRVSLAWMPLLFGNREVKALDLYGPSAGVSRGLDGQLNIADLFQRRHQDSYTLKLDRLT 151

Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203
           V+ G + + DQ +     L+ ++L               D+++G+         D+ R  
Sbjct: 152 VREGTLLLSDQLTHTDKRLASISL-------------DADNLRGTADVSFGAILDDDRRP 198

Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL 263
            ++    P   +   + +          I   G          Y   F+        + +
Sbjct: 199 VRLALTTPLTIQDDQVSLPELEAVAISNIQGLGETKLTI-AGQYKLNFASLQATGSEVTV 257

Query: 264 ELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
             ++++        +   N  +    + S   ++      +++         N   +   
Sbjct: 258 SFTSERPSSEVKLTLPQINASLRELTMPSGSLSAKLSY-ARSQYQLQAALD-NLKLSEGG 315

Query: 324 SMHDLNETDFFEEEEKKNKNDDLKKD 349
              D  + +F         N  L   
Sbjct: 316 LYADKLDGEFNWLAGSSKVNVKLNAP 341


>gi|325523558|gb|EGD01861.1| hypothetical protein B1M_24440 [Burkholderia sp. TJI49]
          Length = 295

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 84/284 (29%), Gaps = 30/284 (10%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68
           G L  +VL G      F      R   E+Q +  + +   ++   +I + P+  ++    
Sbjct: 31  GVLIFLVLFGLLG--FFAAPPLIRHIAEQQLSKQLDRPATIQ---RIALNPYTLNLEADS 85

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ-- 126
           I + ++        I  L +R  +  L  G   V ++ +D P  +         N+    
Sbjct: 86  IHLGERGGQGDFIDIAKLVVRPSWTSLFRGAPIVNEIRLDSPRFHIVRYDAQRFNFTDLI 145

Query: 127 -----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                            +  I V  GRI   D+  ++ + + +  L I            
Sbjct: 146 EKFSTPSKPDSKPTLFSVSNIQVNNGRIDFDDRLLNEKHVVDNWTLGIP------YIATL 199

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN---L 238
                  V       FD    A        A+++   + ++   L  P +I        +
Sbjct: 200 PSKTDIFVQPTLRLRFDGSPIAIDGKTKPFAQSRESEIALKFDKLDVPKLISYAPTKLPV 259

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                        S A        +       R+SG   ++D  
Sbjct: 260 AVTSGLLSSDLALSFA--------MNGETPALRVSGTVDLADAK 295


>gi|313667930|ref|YP_004048214.1| AsmA family protein [Neisseria lactamica ST-640]
 gi|313005392|emb|CBN86826.1| putative AsmA family protein [Neisseria lactamica 020-06]
          Length = 700

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/380 (12%), Positives = 111/380 (29%), Gaps = 28/380 (7%)

Query: 4   RVLIGLGFLFSVVLVGAFT---VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           R+   +  L  ++L        V       + R   ++       +KI+    I+  +LP
Sbjct: 11  RLKYAVAVLTILLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIQRRLLP 69

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            P+V  K++ I +         I+   +   +  L S +I+V    +    L      KG
Sbjct: 70  RPTVILKNLTITEPGGDRTAVSIKETKIGLSWKNLWSDQIQVEKWVVSGAELALTRDGKG 129

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
           V N               + +I ++   +++      + + L ++ L + +         
Sbjct: 130 VWNIQDLIDNPKRKA--SVNRIIIENSTVRLD--FLQERFTLKEVRLNLQSPDSAGQ--- 182

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
             +S    V  + +  + ++          P  +     + +     + I +   G+   
Sbjct: 183 QFESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEAETALNGHRIAVSTTGSPTI 241

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300
                            +   NL L+A+   L     + +  ++I            ++ 
Sbjct: 242 RFNAGGADAADLALRADTAFHNLHLTAQIPAL----ALRNNGIKIETANGTFTAAGENSQ 297

Query: 301 EDNKTKVS-------QDEENLLNFSENGA----ESMHDLNETDFFEEEEKKNKNDDLKKD 349
                K+                 S N      ++   L     +       +   L   
Sbjct: 298 WGGSFKLDRADLHPGIGNIGNAEISGNVKTPRLQTNFSLGSPLVWSRNNG-LEAPRLHVS 356

Query: 350 DIQYSVNKKEEKDNSHDKEN 369
            +Q +VN+  +       + 
Sbjct: 357 TLQDTVNRLPQPRFISRLDG 376


>gi|33594346|ref|NP_881990.1| hypothetical protein BP3467 [Bordetella pertussis Tohama I]
 gi|33564421|emb|CAE43730.1| putative exported protein [Bordetella pertussis Tohama I]
 gi|332383757|gb|AEE68604.1| hypothetical protein BPTD_3419 [Bordetella pertussis CS]
          Length = 839

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/373 (10%), Positives = 108/373 (28%), Gaps = 41/373 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82
             L  D   ++   E        + + ++G I++ + P   +  + + + +       + 
Sbjct: 26  FLLTFDPNAYKYKLEEAVQARYERTLNIEGEIELSLFPRIGLAVQGVSLSEPNSPDVFAS 85

Query: 83  IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--------------- 127
           I+ + +     PLLS  + V  + I+              N+                  
Sbjct: 86  IDSMRLAVAVWPLLSNSLVVDHVTINGFKARVIRGKDSHFNFENLVGGSVQSTDVPGNAA 145

Query: 128 -----------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
                              +      + +  + +K G I++ D  S     ++ LN    
Sbjct: 146 EATAGAITGTAQAIVNGTVSTPKSMQIDIAGLDLKDGEIQLQDAMSGMAVAITKLNAATG 205

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-PLAYP 229
               N    +S+ +               +              + + L+++   P A  
Sbjct: 206 RVTYNQPFDVSLSARVEGGNPRLDAGLTGQAQLTLDPLAKRYAAQRLDLRMEGRLPGAQA 265

Query: 230 IIIDLFGNLFWNEKQPIYS-------GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
             +   GN+ +N                  +    +KL N+E S    +L+ +   ++  
Sbjct: 266 KSLAARGNVAFNGMTSSLDVAGLEILFQGDIVDTATKLTNVEASVAMPKLAVDPHKTELQ 325

Query: 283 VRISRYKLQSILPNSSTDEDNKT-KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341
           +     + +  +P    +       ++    N    + +G     +L+ +          
Sbjct: 326 IDKLAVRAKGAMPGGPFELAVDAPALNISPTNASGDALSGRVRTQELDASFGLNGISGNA 385

Query: 342 KNDDLKKDDIQYS 354
              D+K+  +  +
Sbjct: 386 GELDIKEAKLDST 398


>gi|85716795|ref|ZP_01047762.1| hypothetical protein NB311A_10433 [Nitrobacter sp. Nb-311A]
 gi|85696402|gb|EAQ34293.1| hypothetical protein NB311A_10433 [Nitrobacter sp. Nb-311A]
          Length = 640

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 97/303 (32%), Gaps = 29/303 (9%)

Query: 2   LRRVLIGLGFLFS-VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           + R L   G + + +V +    +   I         + +     G ++ +KG   I + P
Sbjct: 1   MARALKIAGLVAASLVTIVIVLLVTGIPSGFVASLVQDRIERDTGYRLTIKGTTGIDLWP 60

Query: 61  FPSVFFKDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF---- 114
            P      + +DQ     G  +  +  +    E   LLSG +++ ++ ID P L      
Sbjct: 61  SPGFALHLVTLDQPGSAAGDAQIVVGEIRAAFELASLLSGTLKISELAIDHPTLRMPLLR 120

Query: 115 YLSSKGVSNWFQRKSTMDMIHN-VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
             +S GV +   R            ++++ V  G I   D ++     ++D+N  ++ R 
Sbjct: 121 ERTSSGVPSRPDRSEEASEGDTLFPVDRVTVSNGAIVFFDPQTGWENRVNDVNASLTLRA 180

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
                          +   G     ++   F I A  PA      L  +  P    + + 
Sbjct: 181 DR------------QIKITGDARSGDRSLTFAIAATPPAG----PLGRRNVPTELTLEVS 224

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
                    +         +      +  L  S    + +G   +   +  + +  L   
Sbjct: 225 GAPAHQLAARA-----EVRINRQTLLINGLSGSLDDGKFNGWASVDLASKPLVKIDLDFH 279

Query: 294 LPN 296
             +
Sbjct: 280 RLD 282


>gi|94312879|ref|YP_586088.1| hypothetical protein Rmet_3951 [Cupriavidus metallidurans CH34]
 gi|93356731|gb|ABF10819.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
          Length = 1337

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/325 (13%), Positives = 93/325 (28%), Gaps = 35/325 (10%)

Query: 12  LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71
           L    L G F  P  I     +   E+ AT  +G+K+ + G   +      S    ++ I
Sbjct: 48  LAVFGLAGYFGGPPLI-----KYLVEKNATEALGRKVTL-GEAHVRPF-SLSATINNLTI 100

Query: 72  DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------ 125
            + +  +    +     +     +      +  +++D   ++    + G  N+       
Sbjct: 101 YEPDGKTPTVTLGEAEAKTSAASVWHLAPVIDSLHVDALSVHVLRDANGRMNFADVQERF 160

Query: 126 ---QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                K          +  I V        D+  + V  + +  L +     N+   +++
Sbjct: 161 AALPPKPADAKPARFSVSNIAVTNTSFVYEDKLLNTVQRVENFTLTLP-FLSNLPHDVTL 219

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242
           ++             +    A   T    A ++  +L I L  L     +     L   E
Sbjct: 220 NTAPSLF-----AKINGSPLALAGTMQPFADSREANLNINLDGLEVAKYMAFAPKLKDAE 274

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
            +        V    +     E   +   +SG   + D +V             +   + 
Sbjct: 275 VKSGL-----VDTRLNVGFRQEKDKQDLYVSGTIALRDADV--------VTHAGAPLVKA 321

Query: 303 NKTKVSQDEENLLNFSENGAESMHD 327
            +  V  D    L    +      D
Sbjct: 322 GRLAVDLDRVEPLAHKAHVKSIELD 346



 Score = 39.9 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 34/337 (10%), Positives = 88/337 (26%), Gaps = 55/337 (16%)

Query: 77  GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---------- 126
           G+   K   L++  + +  L+ +  V  + +D   L     + G  +             
Sbjct: 315 GAPLVKAGRLAVDLDRVEPLAHKAHVKSIELDGFGLLATRGADGALDLATAFLPEGMKSA 374

Query: 127 ---------------------------RKSTMDMIHNVILEKIHVKGGRIKIID---QES 156
                                           ++  +  +++I +K  ++  +D      
Sbjct: 375 PAKAPAAAPVTATPAPASVVAASGVQVPPKAEEVPWSYAVDRIAIKDAKLGFVDAMAPSG 434

Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANFPA- 212
                +  +N+ I+        P  +D+   I      + +G  D K+     T      
Sbjct: 435 PGKLDIGPVNVDIANLASTGDKPAKLDATVTIADGQTIKQSGELDLKKGTLNGTLETAGV 494

Query: 213 --KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL--ELSAK 268
             +  A     +L        I+   N      QP++      +      L +       
Sbjct: 495 RPQGFAAWWPHELRSQFGDTGINAELNYKMAWSQPVFQFTLEKSRLELSPLYVATREPVN 554

Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328
               +GN   +         K ++           +   ++     L       + + D 
Sbjct: 555 LPASAGNDDRATKAAS-PAPKGRAGRAQRGNRASQRVADTEGANLPL---LRADKLVLDD 610

Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSH 365
            + D  ++  +  +   +     Q +  +        
Sbjct: 611 IQLDLAKQTFEAGQ---VSLAKPQIAATRDHSGQLLE 644


>gi|167838651|ref|ZP_02465510.1| hypothetical protein Bpse38_19232 [Burkholderia thailandensis
           MSMB43]
          Length = 1243

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 86/288 (29%), Gaps = 27/288 (9%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVF 65
            G+G L  +V+ G      F      R   E+Q +  + +   +    +I   P+   + 
Sbjct: 27  TGIGVLIFLVVFGLLG--FFAAPPLIRHVAEQQLSEQLDRPATIA---RIAFNPYTLRLE 81

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
              + + ++        I  L +RA +  L      V ++ +DQP            N+ 
Sbjct: 82  ADGVHVGERGGQGGFVDIGKLVVRASWTSLARFAPIVDEVRLDQPRFRIVRYDAQRLNFT 141

Query: 126 QRKSTMDMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
                                +  I +  GRI+  D+  +  + +    + I        
Sbjct: 142 DLVDKFSKPSPQPSPKPVRFSVSNIQINDGRIEFDDRLLNAKHVVDQWTVGIPFIATLPS 201

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
                      V  +     D    A        A+++  S+ ++   L  P ++     
Sbjct: 202 KTDIF------VEPKLRARLDGSPIAIDGKTKPFAQSRESSINLKFDGLDMPRLLSYAPT 255

Query: 238 -LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
            L  + +    S    V         +       R+SG   ++D  V 
Sbjct: 256 KLPVDVRAGRLSSDLDVK------FAMAGDTPSLRVSGTVDLNDAQVT 297



 Score = 43.0 bits (99), Expect = 0.077,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 91/305 (29%), Gaps = 41/305 (13%)

Query: 40  ATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE 99
            +  +  K A+ G     +    +V   D ++  + +         + + A  L  L   
Sbjct: 266 LSSDLDVKFAMAGD-TPSLRVSGTVDLNDAQVTSRAN-EPLFAAHAVHVAAAQLEPLRNV 323

Query: 100 IRVFDMYIDQPHLNFYLSSKGVSNW------------------FQRKSTMDMIHNVILEK 141
           +   D+ IDQP ++      GV N                       +      ++ +++
Sbjct: 324 LHFDDIRIDQPVVSLARDKAGVLNVMKLAGGANGAPAASRAAAASAAAGKAQPLDLTIKR 383

Query: 142 IHVKGGRIKIIDQESDQVYFLS-------DLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
             +  G + + D        +S         +  ++ +     +  +  +  GS+ AEG 
Sbjct: 384 FAINDGTLNLNDASLATPAAISLRHVATTLADFTLAGKTPARYTLATDVASGGSLKAEGA 443

Query: 195 GNFDNKRS-------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
            +   +++       A  +    P    A S ++    L+  +               + 
Sbjct: 444 FSLAARQADTLLVVDALALPVVQPYLAGATSARVLDGALSTSVKAKAD-WSKTPLDAQVS 502

Query: 248 SGVFSVAGDFSKLLNLELSA-----KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
                +      L N +  A      + +++     +     I+      +  + +  ++
Sbjct: 503 DSELGLKSLRIALPNAKTPAVALPDARVKVT-KIDFAARTAEIASVDATGLALDVARLQN 561

Query: 303 NKTKV 307
            +  +
Sbjct: 562 GQIDL 566


>gi|237747638|ref|ZP_04578118.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
 gi|229379000|gb|EEO29091.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
          Length = 1120

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/371 (12%), Positives = 113/371 (30%), Gaps = 24/371 (6%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED 76
             G + +P  ++        +        +++ ++  + I +L   +     + +     
Sbjct: 38  AAGIYFLPRIVESGA-----KEFVAEKFNRELTIQ-KLDIDLL-NLTAKLDGVVLTDPGS 90

Query: 77  GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN------WFQRKST 130
               +  + L +             V ++ +  P ++     K   N      +  +   
Sbjct: 91  KDPFASFDHLFVELSPETFSERAPVVKEVRLVNPKIHIVRYGKKQYNINDLVAYATQPKE 150

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
            +   N  +  I +  G I++ D +  +   + +LN+ I              ++     
Sbjct: 151 DESKSNFSINNIQIDNGTIRVDDLQRKKTLLIDELNIDIPVIANMPSQVEIFTALA---- 206

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250
                N D      K         K+  + ++L  L  P  +   G L ++    + SG 
Sbjct: 207 ISAKVNNDRIELVGKSRTKPAYDKKSGKISVKLDKLDLPTYL---GYLPFDPGFKLKSGK 263

Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN-KTKVSQ 309
           FS       ++      +K R+     ++  +V ++     ++L  S    D  K+ +  
Sbjct: 264 FS---ADLDIIFPRKKEEKRRILVRGDVTLNSVSLAESNGAAVLKFSELKVDIDKSDILS 320

Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369
            +  +        E   D N    +  E   N               K  EK +      
Sbjct: 321 GKIGIGRIGLKNPEVFLDRNNNGQWNVELLLNTGKKTDTGTQTAKNEKPAEKQSFAIDLG 380

Query: 370 QENFSGDKMIL 380
           Q   SG ++ +
Sbjct: 381 QLAVSGGQVFI 391


>gi|293607174|ref|ZP_06689516.1| hypothetical protein HMPREF0004_5092 [Achromobacter piechaudii ATCC
           43553]
 gi|292814508|gb|EFF73647.1| hypothetical protein HMPREF0004_5092 [Achromobacter piechaudii ATCC
           43553]
          Length = 1228

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 91/316 (28%), Gaps = 32/316 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61
           RR    L  + +V L+        +               ++G+ ++V    KI   PF 
Sbjct: 12  RRAGKILLGIVAVALILCGIAAWQV-PRVLHNALTDDVAKLIGRDVSVG---KISFNPFT 67

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            ++  +D+ + Q    +    +  L + A +  L      V  + + QP +         
Sbjct: 68  LTIRARDLAVAQPGSQTPLLTLAELDVSAAWSSLFWFAPVVDRLTLRQPTIAIVREDVTR 127

Query: 122 SNW---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
            N+                +       +    L  + ++GG I + D+ + +   + +L 
Sbjct: 128 FNFSDIQQRVAQLTADQPAEPPKPDAGLPRFSLNNMVIEGGAITLDDKVTGRKQVVDELG 187

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
           L +        +          V        +         A    K  + +L++    L
Sbjct: 188 LGVPFISTFGYAT------DIDVQPRLHLRINGSPFDLTGVARPFDKVPSSTLRVAFNGL 241

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
                 D+           + S +   +         + +  K R+ G+  +      + 
Sbjct: 242 QLEKWADV---WPMPLPFKLNSALLD-SNLQVVFEQPKDAPPKIRVVGDLGL--RRFDLK 295

Query: 287 RYKLQSILPNSSTDED 302
                ++   S+    
Sbjct: 296 DSAGDTLAAWSALTVT 311


>gi|194333760|ref|YP_002015620.1| hypothetical protein Paes_0930 [Prosthecochloris aestuarii DSM 271]
 gi|194311578|gb|ACF45973.1| hypothetical protein Paes_0930 [Prosthecochloris aestuarii DSM 271]
          Length = 911

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/332 (13%), Positives = 94/332 (28%), Gaps = 30/332 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-- 59
           + +++        ++  G       I      +  +      +  +I       I +   
Sbjct: 1   MNKLIKFFLLTVVLLFAGLMVFLQIIKP-RISDTIKSVLNERLNAQIDYS-DAGISLFQS 58

Query: 60  -PFPSVFFKDIRI----DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            P  +V   D+ +                E  S+      L  G   V+ +  D+P +  
Sbjct: 59  FPRITVTLHDLLVESQPADSAVADTLGSFERFSVSFNPFSLFQGRFDVYALRFDKPQIVI 118

Query: 115 YLSSKGVSNWFQRKSTMDM--------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
                G  NW    ST             ++ L    V    +   D++      L   N
Sbjct: 119 ENDETGHLNWDIFPSTDADEEASSASRPFSLNLHDFRVVDATVIYRDRKGSAALELGGWN 178

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
            Q+  RF    S + + +    +     G      +A  + A+  A        ++   L
Sbjct: 179 NQLKGRFSGESSVIHMVNTVNELTLAAGGVTSIDHAAVSLNADIDADFINKKFTLRKNRL 238

Query: 227 AYP-IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA------------KKSRLS 273
               + + L G +   +        F       K L   + A             +  +S
Sbjct: 239 TLNELGVVLDGTVSLMDDGLNTDLDFKADDITLKNLLSLVPALYTHNFNRLDAEGRVAMS 298

Query: 274 GNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
           G+ K    + ++  +KL   + + S   D   
Sbjct: 299 GHVKGLMRDGQVPAFKLAVDVSDGSFGYDGVA 330


>gi|121594033|ref|YP_985929.1| hypothetical protein Ajs_1662 [Acidovorax sp. JS42]
 gi|120606113|gb|ABM41853.1| protein of unknown function DUF748 [Acidovorax sp. JS42]
          Length = 1235

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 90/279 (32%), Gaps = 26/279 (9%)

Query: 13  FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71
             +   GA+ +   +     +   ER A+  +G+K+ V+   ++  LP+        + +
Sbjct: 17  LVLCWGGAWLLGWLVVPPLAQSQIERHASEALGRKLTVE---RVEFLPWTLEATLHGVAL 73

Query: 72  DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR---- 127
             K+  S + ++  + + AE   L  G   +  + +D P +     + GV +        
Sbjct: 74  ASKDGSSEQVRVGRIYIDAELQSLWRGAPVIDALQVDDPVVRVTQLAPGVYDVDDLLALM 133

Query: 128 ------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                 + +     +  L  I +KGG ++  D+    V+ L  + L +            
Sbjct: 134 AAKPQDEKSATEPAHFALFNIALKGGVVEFDDRTVGVVHTLRRVELDVP------FLSSF 187

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
               +  V        +         A      +   +++ +         DL     + 
Sbjct: 188 SADREVKVTPRLAFELNGSTFDTSAMATPFMDARQAEVRLHIEN------FDLAPFGRYL 241

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280
                        G   +L   +    +  +SG+ ++S 
Sbjct: 242 PPSVPVRLKAGRLGADIQLGFEQRETPRLLISGDVQLSG 280


>gi|144899543|emb|CAM76407.1| protein involved in outer membrane biogenesis [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 745

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 79/281 (28%), Gaps = 21/281 (7%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIE 84
           ID+  ++           G+K+   G +K+ +   PS+   +I +     G+     +I+
Sbjct: 28  IDFERYKGYIADLVETETGRKLTFGGPVKLRLGLVPSLIADNITLSNPAGGAPGPMIRIQ 87

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV 144
            +        LL  EI +  + +  P +     +  + N    K          L ++ +
Sbjct: 88  RVEAEVALPALLRKEILIQRLIVSSPEIVLENENWKLDNGRADKQASGTPTRFDLRELKI 147

Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204
           K  ++     +  Q        + +  +       +++         E TG   N  +A 
Sbjct: 148 KNAKVSWRGTDGRQTLVAVHKLVLLPEQGAGTGLGVNVVGDSQGRTFEFTGKVGNLGAAL 207

Query: 205 KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL---- 260
                           + L       I+ + G +             S   D        
Sbjct: 208 AGK----------PWPVSLKGAGTGTIVSVDGTIGTLNSFTGLDFKVSFQTDELSDFLYM 257

Query: 261 -----LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
                          RL+     + G + +    + +   +
Sbjct: 258 AGYGNGRGNGLLGPMRLAARLHDTGGVLALDDMDVSAGKRD 298


>gi|304311597|ref|YP_003811195.1| Uncharacterized protein involved in outer membrane biogenesis, AsmA
           family [gamma proteobacterium HdN1]
 gi|301797330|emb|CBL45550.1| Uncharacterized protein involved in outer membrane biogenesis, AsmA
           family [gamma proteobacterium HdN1]
          Length = 774

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/371 (13%), Positives = 116/371 (31%), Gaps = 48/371 (12%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLS 87
           D  D+R +   +     G  + + G +     P       ++ +  KE     +++  L 
Sbjct: 31  DPNDYRAEISERVQAQTGVVLTM-GKLGWSFYPLLGFQAGNVHVAMKEGAPQVAELTSLV 89

Query: 88  MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-------------- 133
           +    LPLL  +I V  + I     +      G +NW     +                 
Sbjct: 90  VGVRVLPLLQKQIEVDGVEISGLKAHLQTDKNGRNNWALDAGSAGDAASSEGNTKPGAAA 149

Query: 134 -----------------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
                            +  + + +I ++   ++  DQ +D  Y +   +L++    L+ 
Sbjct: 150 AETKSTGTSETAGEASALPPLQIGRIVLRDSSVRYEDQSADADYQVDLQSLELRNVQLDT 209

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA-YPIIIDLF 235
             PLS       +      +     +A  +  +   +  A  L+I           + L 
Sbjct: 210 PFPLSAKLR---LRDGKGLDVQLALAAKLLAGSSLKQFSAQDLQITTDVSGVLGKTLHLA 266

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
            +   N      +    +A    +  NL    + + L+ + +  +G + ++ +  + +L 
Sbjct: 267 LSGGLNADLDKDTASLQLAKVEVENANLSGDFRVTGLTKSLQW-EGTLALASFDPKKLLA 325

Query: 296 N----SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF---EEEEKKNKNDDLKK 348
           N    +    D+K           NF+  G +    +              +    D  K
Sbjct: 326 NLGMKAPVTADSKALTRVGA----NFTLKGTDHNVVIEPLQVSLDESHLRGRVAVSDFSK 381

Query: 349 DDIQYSVNKKE 359
             +++ ++   
Sbjct: 382 QALEFKLHLDA 392


>gi|237747044|ref|ZP_04577524.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
 gi|229378395|gb|EEO28486.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
          Length = 1379

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/343 (10%), Positives = 104/343 (30%), Gaps = 35/343 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           LR  L G    + +V      V   +    + ++ + E  A+  +G+ +     +     
Sbjct: 53  LRTALTGFFIFYLLVASVFLGVRYLVLPHVSAYKSELETLASESIGRPVTFS-RVSASWY 111

Query: 60  -PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
              P +  +++R+      +   ++E +S    +  L   ++R+  + ID+P +      
Sbjct: 112 GLQPKIDLENVRVADSNG-NEVVRLENVSAIVSWWSLPLMDVRLASLQIDRPDITVMRDK 170

Query: 119 KGVS-------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQIS 170
           +G         +   +         +   +I +  G +   D+  +     L  ++  + 
Sbjct: 171 QGRFHVAGVLVDPAAQNENSIADWILKQHEIVLSDGVLHWKDEFRNGAELNLEQVDFAMK 230

Query: 171 ARFLNIIS---PLSIDSIKGSVIAEGTG---NFDNKRSAFKITANFPAKNKAISLKIQLF 224
            R          +    + GS+   G      F +K S           + +      + 
Sbjct: 231 NRGRRHKFRMTAVPDSQLTGSLDIRGNLLHPRFADKISDISRWKGELYVDMS-----GVD 285

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
              +  + D    +     +       ++       L  ++  +  RL            
Sbjct: 286 MAEWKRLADFP--IGLISGRGAVQAWLTLDEFQLTGLTADIDGEDIRLK-------MEAT 336

Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQD--EENLLNFSENGAESM 325
           + +  L       S  +  +  + +    + + ++S +     
Sbjct: 337 LPQLDLLKASGRLSIQKTGRPPLVKGAEAKPVYSYSASHLSLE 379


>gi|307151842|ref|YP_003887226.1| hypothetical protein Cyan7822_1969 [Cyanothece sp. PCC 7822]
 gi|306982070|gb|ADN13951.1| protein of unknown function DUF490 [Cyanothece sp. PCC 7822]
          Length = 1982

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/379 (11%), Positives = 111/379 (29%), Gaps = 17/379 (4%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67
             G +  ++ +G +    +  +         Q +  + +K+ +       +     + F 
Sbjct: 33  IGGGVLILLGIGGYLGVRYFVYEKLSPLVSTQLSNYINRKVNIGKVESFSL---THIRFG 89

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127
              I           ++ + ++ ++LP L G     D+ I  P+L       G     + 
Sbjct: 90  TSSIPATPTDLDTLSLKAVDIKFDWLPFLLGRPLPLDVTIVDPNLYLDQDKNGKWTNIEL 149

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL-NL-QISARFLNIISPLSIDSI 185
                 +      K+ ++   + +      ++  +    NL     +  ++   L +  +
Sbjct: 150 PKNQRELPIDFDLKVRLEDADLDLKPYALKKIIPIQAAGNLRYTKTKVQDLQYNLDVALL 209

Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL--KIQLFPLAYPIIIDLFGNLFWNEK 243
           +  V  +G    ++ ++   +T N  A  + ++L     L   +     +L  N+   E 
Sbjct: 210 QSQVNVKGQSVIESGKTRLNLTVNRLALTELVTLIPNAPLKLNSGVFNANLNLNVPSFEN 269

Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
                G   V+          L A  +  +   +     V +  +        ++     
Sbjct: 270 IEGTQGQGQVSLSQLAGRIPSLQAPLNA-NIQIRFQGQKVLVDAFDANV----NNIVAQA 324

Query: 304 KTKVSQDEENLLNFSEN----GAESMHDLNETDFFEEEEKKNK-NDDLKKDDIQYSVNKK 358
           K  +   +   LN           +           + + + K              N  
Sbjct: 325 KGSIDWQQGYNLNVEIKPFKFSNLARLVSLSLPLKVDGQLQLKFKITGAVTQPLIIGNIN 384

Query: 359 EEKDNSHDKENQENFSGDK 377
            +     DK +  N + + 
Sbjct: 385 NKNPVLLDKLSLRNINANF 403


>gi|92114830|ref|YP_574758.1| hypothetical protein Csal_2712 [Chromohalobacter salexigens DSM
           3043]
 gi|91797920|gb|ABE60059.1| protein of unknown function DUF748 [Chromohalobacter salexigens DSM
           3043]
          Length = 595

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 55/346 (15%), Positives = 108/346 (31%), Gaps = 39/346 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFT----VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58
           RR+  GL  L  V ++        +P +ID         +  T   G+++ +     + +
Sbjct: 15  RRLGWGLSVLAGVAVLLLVAWWWALPAYID-----HRLSQMLTERSGRQVTID---DVTL 66

Query: 59  LPFPS-VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
            P+   V    +RI  + D    +    +    ++  L     R   + +  P L     
Sbjct: 67  TPWRHQVTLDGLRIAGQADTPVFAS-RRVVATLDWHSLFDAGWRFERVDLTSPRLQLIWR 125

Query: 118 SKGVSNWF--QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
           + G  N               + ++++ V  GR+  I++  D    LS  NL + AR  +
Sbjct: 126 AGGEWNLARLFGGGGGGGSAPLRIDRLTVSDGRLDWINRRPDAPLTLSLKNLDLEARHYD 185

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
                  +S       +G  ++            F       +L I L     P+   L 
Sbjct: 186 -------NSDDRPFALQGQADWRGGTLKGTGEMGF----SPWTLDIDLDADQVPLTA-LS 233

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF--------KISDGNVRISR 287
           G L    +    SG    A    +      +  +    G                 R+ R
Sbjct: 234 GYLAHVVRAEPSSGALD-ARIRLRSGRASDAGTQVNGQGGIEGLEMHDPDTDQPVARVER 292

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN-GAESMHDLNETD 332
             ++  L  +S       +    E   L+ + +   ++  DL +  
Sbjct: 293 LAVE-GLTFASARPALTAERVSLEAPWLDVTIDERLDTNLDLWQPP 337


>gi|294506901|ref|YP_003570959.1| hypothetical protein SRM_01086 [Salinibacter ruber M8]
 gi|294343229|emb|CBH24007.1| conserved hypothetical protein [Salinibacter ruber M8]
          Length = 1019

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/273 (17%), Positives = 91/273 (33%), Gaps = 19/273 (6%)

Query: 3   RRVLIG----LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58
           RR+L      LG L  +VL  A  +P        +           G+++ +   I + +
Sbjct: 38  RRLLKWGGGLLGGLLVLVLAAALLLPRLFTSEQLKGYVVPPLEEATGRQVHID-AIGLRV 96

Query: 59  LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           LP P+V     R+   E    +   +   L++     PL   +IR   + ++ P + + +
Sbjct: 97  LPAPAVRVSGFRLANAEGYGPAPAVEARALTVDVALWPLFLLDIRPTAVALEAPVVRYEV 156

Query: 117 SSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
              G +N+                 +  + +    V G R+   D+ + Q   L DL+ Q
Sbjct: 157 GKDGATNFDDLGASDTTAAAGDESPLAGIPVSSFRVSGARMNYADRSTGQALRL-DLDAQ 215

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ---LFP 225
           +SAR               SV A       +     +  A +  +      +++   L  
Sbjct: 216 LSARPDGAAITSEGTVDLRSVRALLPSVGPDTLVVQEAAATYDVRVAPSEGEVEVRTLQL 275

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS 258
              P+ I   G +     QP     F       
Sbjct: 276 DTAPVTITADGTIAGLNAQPALDLAFETGRTDL 308


>gi|222111234|ref|YP_002553498.1| hypothetical protein Dtpsy_2042 [Acidovorax ebreus TPSY]
 gi|221730678|gb|ACM33498.1| protein of unknown function DUF748 [Acidovorax ebreus TPSY]
          Length = 1235

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 93/292 (31%), Gaps = 25/292 (8%)

Query: 13  FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71
             +   GA+ +   +     +   ER A+  +G+K+ V+   ++  LP+        + +
Sbjct: 17  LVLCWGGAWLLGWLVVPPLAQSQIERHASEALGRKLTVE---RVEFLPWTLEATLHGVAL 73

Query: 72  DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR---- 127
             K+  S + ++  + + AE   L  G   +  + +D P +     + GV +        
Sbjct: 74  ASKDGSSEQVRVGRIYIDAELQSLWRGAPVIDALQVDDPVVRVTQLAPGVYDVDDLLALM 133

Query: 128 ------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                 + +     +  L  I +KGG ++  D+  + V+ L  + L +            
Sbjct: 134 AAKPQGEKSATEPAHFALFNIALKGGVVEFDDRTVEVVHTLRRVELDVP------FLSSF 187

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PIIIDLFGNLFW 240
               +  V        +         A      +   +++ +      P    L  ++  
Sbjct: 188 SADREVKVTPRLAFELNGSTFDTSAMATPFMDARQAEVRLHIENFDLAPFGRYLPPSVPV 247

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN---VRISRYK 289
             K         + G   +     L +   +LSG           ++    +
Sbjct: 248 RLKAGRLDADVQL-GFEQRETPRLLISGDVQLSGVHATDAQEQPLLQFEEMR 298


>gi|148263439|ref|YP_001230145.1| AsmA family protein [Geobacter uraniireducens Rf4]
 gi|146396939|gb|ABQ25572.1| AsmA family protein [Geobacter uraniireducens Rf4]
          Length = 1104

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 96/299 (32%), Gaps = 27/299 (9%)

Query: 21  FTVPLFIDWTDFREDFERQATLIVGKKIAVK-GGIKIHILPFPSVFFKDIRIDQKEDGSF 79
             +        ++     +    + +++  + G   +   P  S  F ++ + +K+  + 
Sbjct: 56  VLLDKLFHLESYKTQILAEIEKSLNRRVFYEKGEFSLQFGP--SFTFSNVVVKEKDGLTN 113

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVIL 139
               + L+ +   LPLL  ++ + +M  D+P +     ++G+SN             + L
Sbjct: 114 FVTAKRLTFKIALLPLLEKKVSLKEMVFDRPDIALSRDNQGISNISDLLEAKKTAVTLHL 173

Query: 140 EKIHVKGGRIKIIDQE---SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196
           + I +K G I+  D     +     L + +L IS    +    + + +           +
Sbjct: 174 KGIRLKKGTIRFQDMAITPAGITTVLENTDLNISQFARSKSCDVKLTASIAGFSKGNRFS 233

Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYP----------------IIIDLFGNLFW 240
                       + P    + ++K+    L                      D+  N   
Sbjct: 234 LAGTAKLSD--KDKPLSETSFNMKLDAKNLDVAHFWPYYSKYVPFRKILGRFDIDTNFIG 291

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---LSGNFKISDGNVRISRYKLQSILPN 296
           +      +G   ++G       +  +    R      + ++++ ++ +    L     N
Sbjct: 292 SFFAFTSNGEMKISGLRFDYPQVFHAVLAPRDLHFRYDMELTNRDISVKSLNLTVDGLN 350


>gi|88706128|ref|ZP_01103835.1| AsmA [Congregibacter litoralis KT71]
 gi|88699522|gb|EAQ96634.1| AsmA [Congregibacter litoralis KT71]
          Length = 620

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 50/368 (13%), Positives = 113/368 (30%), Gaps = 33/368 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R +L  LG    ++++ A  VPLF+D     E    +     G ++ + G   + + P 
Sbjct: 1   MRVLLWVLGVPLVLIILAAILVPLFLDEEALVEIAAERIKEQSGAELRIDGDASLSLFPK 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            ++    + +    D       +  S     +PL    + +  + +D   L+     +  
Sbjct: 61  VALSASAVSL-NVPDSKTRIVADSFSAGVALMPLFRKSVEIDSIRVDGLTLSAEAVDEEA 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           +      +T      +  E   V+         E+        L L++    L  I  ++
Sbjct: 120 AKAEAMDTTTLSNSELD-EFYAVRAQARAKAQAEAAASVLAVPLALEVGELSLADIHVIT 178

Query: 182 IDSIKGSVI-------AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
           +DS    +             N D +          P+ +              P+ I L
Sbjct: 179 VDSDGQPISELQLRQLTAKDLNIDGRPVPLTAEVIIPSGD-----------DKDPMSITL 227

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
            G    N          ++     ++           LSG F +      + + +LQ+  
Sbjct: 228 AGEFRTNLNAE----TLNLDSLNLRVTGATPDPITLGLSGEFALDTQVADL-KLELQTGD 282

Query: 295 PNSSTDE--------DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346
              S                ++  E N       G ++  ++ +++   + +     + L
Sbjct: 283 LKGSGTLRYASFESPQIDADLALTELNPALLVLAGPDAGAEVADSEASADGDTSLPLNAL 342

Query: 347 KKDDIQYS 354
           +  D +  
Sbjct: 343 RMIDTRAK 350


>gi|320353630|ref|YP_004194969.1| AsmA family protein [Desulfobulbus propionicus DSM 2032]
 gi|320122132|gb|ADW17678.1| AsmA family protein [Desulfobulbus propionicus DSM 2032]
          Length = 902

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 81/298 (27%), Gaps = 28/298 (9%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG- 77
           G       +     ++    Q     G+ + + G ++I +   PSV    I +       
Sbjct: 23  GMVIAVKSVSPDRIKKMLTAQVQSATGRALTIAGPLEIRLGLEPSVVASGITLSNPPGST 82

Query: 78  -SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH- 135
                K+E         PLL+ +I +  + ++ P +     +KG  N             
Sbjct: 83  RPEMVKMERFEFEMALRPLLNRQIVINRLLLNAPDIVIETEAKGPGNLDFSPPDQQGRPA 142

Query: 136 ---------------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                          +V L ++ +  G I + D+ +     +    L +     +   P 
Sbjct: 143 PPAATEQQEGAGASFSVTLREVKISNGVIALHDRTAKTTETVRIHELTLKPDTAD---PA 199

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
            +     +   E   +            +       +    +   L     ID    L  
Sbjct: 200 LLALQLLTTAREQKIDLAGTMGDINAILSGAPWPLKLKAAAKAIALNVEGRIDKLAALQG 259

Query: 241 NEKQPIYSGV-----FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
              +    G         AG       L  +     ++     + G   +S   LQ+ 
Sbjct: 260 LNFKLTAQGEELGEVLRAAGVSLPE--LPQTLGPFTVTARVDNAGGRFNLSDLDLQAG 315


>gi|150024503|ref|YP_001295329.1| hypothetical protein FP0400 [Flavobacterium psychrophilum JIP02/86]
 gi|149771044|emb|CAL42511.1| Putative outer membrane protein [Flavobacterium psychrophilum
           JIP02/86]
          Length = 860

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 49/381 (12%), Positives = 113/381 (29%), Gaps = 34/381 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58
           M +++ IG+G    +++     +P+F      +   E+     V  K+       + +  
Sbjct: 1   MKKKIFIGIGVFLLIIIASLAAIPIFF-KDQIKAKIEKSINENVDAKVTFA-DASLSLFK 58

Query: 59  -LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE---IRVFDMYIDQPHL 112
             P  +V  + + I  K    G      E L+++     L +GE   + +  + +     
Sbjct: 59  NFPQANVGIQKLIIINKAPFAGDTLVAFEELNLQMSVKELFNGENQPMTLKAISVKNGKA 118

Query: 113 NFYLSSKGVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
           N   +  G+ N+        ++ +      + ++   ++    K  D+ S     +++LN
Sbjct: 119 NILFNKDGIGNFDIAIKDNNKEESKSKPFAMNIQNYALENFNFKYYDERSKIKMVINELN 178

Query: 167 LQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
              +  F   I  L   S    S+  +      N   +         +    + K     
Sbjct: 179 HTGTGNFAAQILDLDTKSTAKISLDMDKMNYMKNVAISLDAVLGIDLEKSKYTFK-DNTA 237

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL------LNLELSAKKSRLSGNFKIS 279
               + +   G +   E    Y   F       K                 + +G+F ++
Sbjct: 238 KINELPLQFNGFIQLLEDGQDYDLTFKTPTSSFKNFLGLVPAAYAGDLNTVKTTGDFTVA 297

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD---LNETDFFEE 336
                  +    +I   +     N       +        +    + D   +NET    +
Sbjct: 298 G--FAKGKLTNATIPKFNIAIASNNASFQYPDLPK-----SVQNIIIDTKIINETGLMND 350

Query: 337 EEKKNKNDDLKKDDIQYSVNK 357
                     K D   ++   
Sbjct: 351 TYVNLDKLSFKIDQDVFTAKA 371


>gi|466662|gb|AAB18501.1| unnamed protein product [Escherichia coli str. K-12 substr. MG1655]
          Length = 183

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 11  KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 70

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 71  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 130

Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII 152
           P       S+  +NW    +  D          + + GR   I
Sbjct: 131 PDARLIRLSEKNNNWTFNLANDDNKD----ANANRRHGRFGWI 169


>gi|115373227|ref|ZP_01460528.1| AsmA family [Stigmatella aurantiaca DW4/3-1]
 gi|310817519|ref|YP_003949877.1| AsmA family protein [Stigmatella aurantiaca DW4/3-1]
 gi|115369828|gb|EAU68762.1| AsmA family [Stigmatella aurantiaca DW4/3-1]
 gi|309390591|gb|ADO68050.1| AsmA family protein [Stigmatella aurantiaca DW4/3-1]
          Length = 900

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 50/346 (14%), Positives = 111/346 (32%), Gaps = 45/346 (13%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQA--TLIVGKKIAVKGGIKIHILP 60
           RR    LG +F+V+++G   V   +D    ++   + A  +  +G+ I + G I   + P
Sbjct: 7   RRWPYVLGGIFAVLVLGVAIVLWRLDAILLQQARAQAATFSQQLGRPIQI-GDISTKLFP 65

Query: 61  FPSVFFKDIRIDQKEDGS-FESKIEGLSMRAEFLPLLS---GEIRVFDMYIDQPHLNFYL 116
              V  +++ +   E      ++++ L +R   +PLL     +I+V +  +    +N   
Sbjct: 66  HIGVDVENVSVGAAEGEDLPLAEVKALDVRVAAMPLLRSSGKDIQVLNAEVTGLTVNVIR 125

Query: 117 SSKGVSNW-----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159
              G +N                      +    +  V +++  +  G I+ +D+   + 
Sbjct: 126 LPDGTTNVQRLQERLASQQKPEEEAPPENTPPTDLSGVRVDRAALTDGTIRFVDRSGAKA 185

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-------------DNKRSAFKI 206
             L+  +L I  + L +  PL +      +  +                    +R + K 
Sbjct: 186 QELAVSDLDIEVKDLRVGQPLEVKLAAAVLAQKQNLFVTLSASPLPPTLVPTPERLSLKA 245

Query: 207 TANFPAKNKA-ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
            A   A     +   +                      +       ++     K    E 
Sbjct: 246 EAIDLAPLGPFLPPSVGFQAGTLTADWKAELGAAIPGGKGPTRLEGAIRALGLKFAGAEG 305

Query: 266 SAKK---SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308
                          ++ G++ + R+KL           D K +V 
Sbjct: 306 GKALDVVLDTDVKADLAAGDLALDRFKLDFGPAG----IDGKGRVK 347


>gi|326793901|ref|YP_004311721.1| AsmA family protein [Marinomonas mediterranea MMB-1]
 gi|326544665|gb|ADZ89885.1| AsmA family protein [Marinomonas mediterranea MMB-1]
          Length = 788

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 58/383 (15%), Positives = 116/383 (30%), Gaps = 51/383 (13%)

Query: 18  VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG 77
            G   V +F+D  DF+++    A       + + G I     P+  V   DI +   +  
Sbjct: 20  GGIGYVLIFVDPNDFKKELISLADKHANIDLKIDGDISWSFFPWLGVELNDIGVA-AKGE 78

Query: 78  SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM---- 133
           S  +K E    R   LPLL  +I V  + +     +  +  +G  NW     T       
Sbjct: 79  STLAKFEEAEFRLAVLPLLQQKIEVDTVRLIGLKADLVMDEEGNGNWQLGSKTDSQKQAS 138

Query: 134 ----------------------------------IHNVILEKIHVKGGRIKIIDQESDQV 159
                                             I ++ +EKI +   +++ +D++    
Sbjct: 139 NQSSIASSTASMPSETDAVTPNAAKAAQTSSAYTIPDINIEKIELVDAQVRFVDKQRGMD 198

Query: 160 YFLSDLNLQISARFLNIISPLSID-SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218
             L+  N  +S        PL  D  ++G +  E  G   +      + A+     +   
Sbjct: 199 L-LAMFNTNLSNVRWGEAWPLEFDIKLEGILPKEANGEQQSIGHTMSLGADLTVFPEHQR 257

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278
           L +    +       +           I      +  +   +  L L +         K+
Sbjct: 258 LALSDLIVKTRTEAAMLPISPLLANAQIRQLELDLPQENLIIDGLSLDSLGVSFESQIKV 317

Query: 279 SDGNVRISRYKLQSILPN-SSTDEDNKTKVSQDE--------ENLLNFSENGAESMHDLN 329
            +  +   ++ L + +   S  +  NK  +   E           L  S  G  +   + 
Sbjct: 318 FEL-LSKPQFSLAANVTEFSPRELLNKLALPLPEMADETTLSALQLTLSLEGDANAVKVQ 376

Query: 330 ETDFFEEEEKKNKNDDLKKDDIQ 352
                 +E +   N  +K   + 
Sbjct: 377 PISIRLDETQLEANASVKFTPLS 399


>gi|49473944|ref|YP_031986.1| hypothetical protein BQ02970 [Bartonella quintana str. Toulouse]
 gi|49239447|emb|CAF25797.1| hypothetical protein BQ02970 [Bartonella quintana str. Toulouse]
          Length = 626

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/383 (12%), Positives = 110/383 (28%), Gaps = 60/383 (15%)

Query: 1   MLRRVLIGLGFLFSVVL----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           M  R++  L  +F  ++         +P  +     R    +  +   G  + ++   ++
Sbjct: 1   MRARIIKFLSGIFITIVFLFGASILILPSLVSTDAIRIRLAQDLSAWTGYNVQLRDPPRL 60

Query: 57  HILPFPSVFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           ++ P+P  F   + +  K  +     + E + +    + LL G +   +  I +P     
Sbjct: 61  NLFPYPRAFLFGVTLTSKMNNAVPLMEAESIEVDLSLVDLLWGHVSFSETRIVRPQFVME 120

Query: 116 LSSKGVSNWFQRKSTMDMIHNVIL------------------------EKIHVKGGRIKI 151
              K V+++F R S       + +                         +I +K G +  
Sbjct: 121 KPVKTVADFFTRFSQSQGALGLAIRNAREIIKHNPDQPDIKRLLNQPFGRIVIKNGVLVY 180

Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP 211
            D  S     ++ LN  +        +                  +  + +   I A+  
Sbjct: 181 HDSLSSVAEKITGLNAALDWPEATQEA-----------RFRADARWRGELTKLSIDADQA 229

Query: 212 ---AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268
                     +K  +  +   I       L    +  I+ G  S+           +   
Sbjct: 230 LLLLAGGKSQIKASINSVRGGITFTGQAQLS---EYYIFDGKVSMRSPEWNQTLAWIGGS 286

Query: 269 K---------SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE-ENLLNFS 318
           +              +F     +++++                   ++   +   ++  S
Sbjct: 287 QFWGHGLKIPIVWESHFLAQPMHIKMNNVTFTMGTS----RARGALELDFQDYVPIVIGS 342

Query: 319 ENGAESMHDLNETDFFEEEEKKN 341
                   +L+E  F   EEKK 
Sbjct: 343 LAFDNLDFNLSELVFSLVEEKKA 365


>gi|319782143|ref|YP_004141619.1| AsmA family protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168031|gb|ADV11569.1| AsmA family protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 617

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 43/340 (12%), Positives = 102/340 (30%), Gaps = 35/340 (10%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M+RR +  +G    VV +    +PL       R+    + +   G ++A+ G  +I + P
Sbjct: 5   MIRRGIWAIGAAVIVVALVVAALPLIASTRIVRDRIAWEMSAWSGFRVAIDGSPRIEVWP 64

Query: 61  FPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
                  D+ + Q  D       + E + +    +  L G++      + +P +    + 
Sbjct: 65  TFRAILTDVTLSQWTDTEAPPVVEAERVEVDLSAMAALRGDVAFSTARLVRPTIRVQRTP 124

Query: 119 KGVSNWFQRKST-------------MDMIHNVILEKI-HVKGGRIKIIDQESDQVYFLSD 164
            G+                              L+K+     G ++  D          D
Sbjct: 125 AGLFLPAVPTGGRITRSIDTARGLVNADPAKPDLDKLPTDTFGTVEFRDGRMVASIGGKD 184

Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQL 223
           + +       ++    +  ++  +     TG +  +  A  + +  P       +  + L
Sbjct: 185 VEI-----LSSLNGQANWAAMNSNATLSATGIWRGESVALDVASAKPLVLFAGGTAPLTL 239

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK--------LLNLELSAKKSRLSGN 275
              A P      G    +E    + G    +    +         +    +     +S  
Sbjct: 240 SFKAAPATFSFDGTASMSENT-YFDGQAKFSAPSLRRVLEWSQAGIAPGAAIGSVSISSK 298

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315
              + G V+       +I  +++        +S  E   +
Sbjct: 299 ITATGGRVKFDN---TAIALDNNPGM-GALDLSLGEAQPV 334


>gi|256820936|ref|YP_003142215.1| hypothetical protein Coch_2110 [Capnocytophaga ochracea DSM 7271]
 gi|256582519|gb|ACU93654.1| conserved hypothetical protein [Capnocytophaga ochracea DSM 7271]
          Length = 892

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 48/385 (12%), Positives = 111/385 (28%), Gaps = 28/385 (7%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58
           + +++L   G    ++++    +P F      +E     A   +   I ++  + I +  
Sbjct: 3   IAKKILKWGGITLLLLIIAMIAIPFFF-KDTIKEKVIEMANENLKANIGLQ-DVDISLFK 60

Query: 59  -LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
             P   V   D  +  KE   G      + + +      LL+G   +    +    +  +
Sbjct: 61  NFPKARVTLNDFVLVNKEPFVGDTLFAAKHIDVTLSIKDLLAGNYNLLGANVKDASVYIH 120

Query: 116 LSSKGVSNWF-----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
           L+ +G  N+       +         + +++ +V+  +      + +    ++D+     
Sbjct: 121 LNKEGEGNYDIAIPSDKPEEESAPIKLDIQRYNVENLKFTFKMDDGNLFMEVADIYHSGK 180

Query: 171 ARFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
             F   +  L   +    +     +          +       KN+  + K Q       
Sbjct: 181 GNFAEEVLDLDTQTKANLTFAMGKSTFMKRVPITLQAILGIDLKNQKYTFK-QNKATVNR 239

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNL-----ELSAKKSRLSGNFKISDGNV 283
           + +   G +   E+   Y   FS     F   L L       S +  + +GN  +     
Sbjct: 240 LDLVFDGFIQLLEEGQHYDLTFSTPTNSFQNFLALIPEEYSKSIENVKTTGNLTL--KGF 297

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343
                    I        +     +  +   L  +         +N       + K N N
Sbjct: 298 AKGDMVGDKIPT---FGLEMYADNASFKYPNLPKTVRDITIDLKVNNATGITNDTKVNLN 354

Query: 344 D---DLKKDDIQYSVNKKEEKDNSH 365
                + +D      N      N  
Sbjct: 355 KFTMSIDQDHFSARANVSNVVVNPF 379


>gi|315224136|ref|ZP_07865976.1| AsmA family protein [Capnocytophaga ochracea F0287]
 gi|314945869|gb|EFS97878.1| AsmA family protein [Capnocytophaga ochracea F0287]
          Length = 892

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 48/385 (12%), Positives = 111/385 (28%), Gaps = 28/385 (7%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58
           + +++L   G    ++++    +P F      +E     A   +   I ++  + I +  
Sbjct: 3   IAKKILKWGGITLLLLIIAMIAIPFFF-KDTIKEKVIEMANENLKANIGLQ-DVDISLFK 60

Query: 59  -LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
             P   V   D  +  KE   G      + + +      LL+G   +    +    +  +
Sbjct: 61  NFPKARVTLNDFVLVNKEPFVGDTLFAAKHIDVTLSIKDLLAGNYNLLGANVKDASVYIH 120

Query: 116 LSSKGVSNWF-----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
           L+ +G  N+       +         + +++ +V+  +      + +    ++D+     
Sbjct: 121 LNKEGEGNYDIAIPSDKPEEESAPIKLDIQRYNVENLKFTFKMDDGNLFMEVADIYHSGK 180

Query: 171 ARFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
             F   +  L   +    +     +          +       KN+  + K Q       
Sbjct: 181 GNFAEEVLDLDTQTKANLTFAMGKSTFMKRVPITLQAILGIDLKNQKYTFK-QNKATVNR 239

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNL-----ELSAKKSRLSGNFKISDGNV 283
           + +   G +   E+   Y   FS     F   L L       S +  + +GN  +     
Sbjct: 240 LDLVFDGFIQLLEEGQHYDLTFSTPTNSFQNFLALIPEEYSKSIENVKTTGNLTL--KGF 297

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343
                    I        +     +  +   L  +         +N       + K N N
Sbjct: 298 AKGDMVGDKIPT---FGLEMYADNASFKYPNLPKTVRDITIDLKVNNATGITNDTKVNLN 354

Query: 344 D---DLKKDDIQYSVNKKEEKDNSH 365
                + +D      N      N  
Sbjct: 355 KFTMSIDQDHFSARANVSNVVVNPF 379


>gi|309378224|emb|CBX23138.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 700

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 49/382 (12%), Positives = 112/382 (29%), Gaps = 32/382 (8%)

Query: 4   RVLIGLGFLFSVVLVGAFT---VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           R+   +  L  ++L        V       + R   ++       +KI+    I   +LP
Sbjct: 11  RLKYAVAVLTMLLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIGRRLLP 69

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            P+V  K++ I +         ++   +   +  L S +I++    +    L      KG
Sbjct: 70  RPTVILKNLTITEPGSNRTAVSVKETKIGLGWKNLWSDQIQIEKWVVSGAELALTRDGKG 129

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
           V N               + +I ++   +++   +        +LNLQ            
Sbjct: 130 VWNIQDLIDNPKRKA--SVNRIIIENSTVRLDLPQDRLTLKEVNLNLQSPDSAGQQ---- 183

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
             +S    V  + +  + ++          P  +     + +     + I +   G+   
Sbjct: 184 -FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEAETALNGHRIAVSTTGSPTI 241

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL------------SGNFKISDGNVR-ISR 287
                            +   NL L+A+   L            +G F  +  N +    
Sbjct: 242 RFNAGGADAADLALRADTAFHNLHLTAQIPALALRNNGIKIETANGTFTAAGENSQWGGS 301

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347
           +KL     +         ++S       N      ++   L     +  +    +   L 
Sbjct: 302 FKLDRADLHPGISNIGNAEISG------NVKTPRLQTNFSLGSPLVWSRDNG-LEVPRLH 354

Query: 348 KDDIQYSVNKKEEKDNSHDKEN 369
              +Q +VN+  +       + 
Sbjct: 355 ISTLQDTVNRLPQPRFISRLDG 376


>gi|317152641|ref|YP_004120689.1| hypothetical protein Daes_0926 [Desulfovibrio aespoeensis Aspo-2]
 gi|316942892|gb|ADU61943.1| hypothetical protein Daes_0926 [Desulfovibrio aespoeensis Aspo-2]
          Length = 1231

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 80/295 (27%), Gaps = 17/295 (5%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFK 67
           + F   + L     V   +     R     Q+   + + + +     +   P    +   
Sbjct: 18  VAFWLIIALAAYVLVGFLLVPPALRSIIVSQSQSALKRTVHLG---SVSFNPLTLRLALH 74

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ- 126
           D R D  E          LS+R     +      V  + +    ++      G  +    
Sbjct: 75  DFRADALEGEVPLMSFGELSLRPGVASVWRMAPVVSSLALRDLTVDIVFFGDGRYSISDL 134

Query: 127 -------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
                              L +  +    I   D+   + + +S++NL I          
Sbjct: 135 LDSDGEQADQPPGQFLPFALSEFEMSNATIVFDDRSKAKRHVVSEINLSIPFTSSFEGLR 194

Query: 180 LSIDSIKGSVIAEGT-GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG-N 237
                 + S +  G       +   F  T        A+++ +      +P + DL    
Sbjct: 195 KEFTQPEFSAVVNGDPVKLKGRTLPFDDTLLTEFSLGAVNVDLD---QYWPYLSDLIPLT 251

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
           L   +     S  F  + D    L L      + L        G + ++R   Q 
Sbjct: 252 LVKGQLSSEISINFERSDDQRLKLFLSGGGALNGLELTSPQDGGVLSVNRIAFQM 306



 Score = 56.8 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/288 (10%), Positives = 78/288 (27%), Gaps = 15/288 (5%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEG 85
            I  T  +     + ++   +        ++ +          + +   +DG     +  
Sbjct: 247 LIPLTLVKGQLSSEISINFER----SDDQRLKLFLSGGGALNGLELTSPQDGG-VLSVNR 301

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVK 145
           ++ + E   L    + +  + +DQP +       G  NW    ++               
Sbjct: 302 IAFQMERFSLGDSLLHLRQVTVDQPRVKLIRRPGGEFNWAGYFTSTQDGAGPDEAGQAGA 361

Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK 205
                           L  + +   +                 V A  TG     R+   
Sbjct: 362 EQS-----ASPSLRVDLGSVEVTSGSVEWIDQDVPGGFERTYPVTARATGLSTGSRTPGT 416

Query: 206 ITANFPAKNKAISLKIQLFPLAYPIIIDL-----FGNLFWNEKQPIYSGVFSVAGDFSKL 260
            +A+  + N    ++I       P ++          L         +   ++A   + +
Sbjct: 417 FSASLGSANGGGVIEISGQCRLDPALVTATLTASDLTLAEYSPYFATALPLTLASGSAGI 476

Query: 261 LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308
                  + +  S    + DG++ +S  +L        +    +  VS
Sbjct: 477 SATLAVEQTTNKSMAVSVKDGSLTLSDLRLHKPAAGEPSVLAGQLAVS 524



 Score = 44.1 bits (102), Expect = 0.040,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 68/258 (26%), Gaps = 4/258 (1%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68
           L     + L G    P+      F +    Q        +   G   +H +        +
Sbjct: 669 LVGTAQIALRGLGLAPVNTYLARFADLELAQGAASADLTLTFDGNDTLHFVLEGDSALAN 728

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128
            R+     G   + I+ L +    L      +RV  + +D P         G +N  +  
Sbjct: 729 ARLMDTLAGDELAGIDALRLSKIRLENEPYRLRVDTVRLDDPRAVLRFEQDGRTNIQRTL 788

Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188
                         +   G     D  +          +Q    F   +    + +  G 
Sbjct: 789 RVPPPEPTDRAAG-NRSPGPGAATDAANATPPLADTPLVQDEPPFFESLEIGRVTTENGQ 847

Query: 189 VIA---EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
           +       T  +  + +  ++T    ++       + +     P  + + G L       
Sbjct: 848 IRFHDASVTPPYSTEMADIRLTLTNISQAPDAQPGLDMQASIGPTPLSVTGTLNPLAVPI 907

Query: 246 IYSGVFSVAGDFSKLLNL 263
                 ++ G     L+ 
Sbjct: 908 GSDLAVTLTGLDLASLSP 925


>gi|261399952|ref|ZP_05986077.1| AsmA family protein [Neisseria lactamica ATCC 23970]
 gi|269210405|gb|EEZ76860.1| AsmA family protein [Neisseria lactamica ATCC 23970]
          Length = 700

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 46/379 (12%), Positives = 105/379 (27%), Gaps = 26/379 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFT---VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           R+   +  L  ++L        V       + R   ++       +KI+    I   +LP
Sbjct: 11  RLKYAVAVLTMLLLAAIGLHASVYRIFTPENIRSRLQQSI-AHTHRKISFDADIGRRLLP 69

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            P+V  K++ I +         ++   +   +  L S  I++    +    L      KG
Sbjct: 70  RPTVILKNLTITEPGSNRTAVSVKETKIGLGWKNLWSDRIQIEKWVVSGAELALTRDGKG 129

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
           V N               + +I ++   +++   +         LNLQ            
Sbjct: 130 VWNIQDLIDNPKRKA--SVNRIIIENSTVRLDLPQDRLTLKEVSLNLQSPDSAGQQ---- 183

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
             +S    V  + +  + ++          P  +     + +     + I +   G+   
Sbjct: 184 -FESSGILVWGKLSVPWKSRGLFLSDGIGTPKIS-PFHFEAETALNGHRIAVSTTGSPTI 241

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300
                            +   NL L+A+   L     + +  ++I            ++ 
Sbjct: 242 RFNAGGADAADLALRADTAFHNLHLTAQIPAL----ALRNNGIKIETANGTFTAAGENSQ 297

Query: 301 EDNKTKVS-------QDEENLLNFSENGAESMHDLN---ETDFFEEEEKKNKNDDLKKDD 350
                K+                 S N        N    +      +   +   L    
Sbjct: 298 WGGSFKLDRADLHPGIGNIGNAEISGNVKTPRLQTNFSLGSPLVWSRDNGLEAPRLHIST 357

Query: 351 IQYSVNKKEEKDNSHDKEN 369
           +Q +VN+  +       + 
Sbjct: 358 LQDTVNRLPQPRFISRLDG 376


>gi|307308414|ref|ZP_07588118.1| AsmA family protein [Sinorhizobium meliloti BL225C]
 gi|306901017|gb|EFN31625.1| AsmA family protein [Sinorhizobium meliloti BL225C]
          Length = 608

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/333 (12%), Positives = 95/333 (28%), Gaps = 27/333 (8%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS-FESKIEG 85
           +  T+ R   ER      G K  + G  ++   P P V      I          ++I  
Sbjct: 45  VSTTEARATMERMLDDWSGGKSTISGEPEVRFWPEPLVTLPATTIVSTGPEPLRLAEIGR 104

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-----QRKSTMDMIHNVILE 140
           ++     L  L GE  + ++ +  P +     + G  NW                     
Sbjct: 105 ITASFSLLSALRGEQALEEITLVDPVITLERGADGAVNWQKPDWLVPPGNAMPRDEAPFG 164

Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200
            I ++ GR +++D+ +                   I   L   S  G + A+       +
Sbjct: 165 DITIENGRFRVVDRLAAT---------GEGVDVAGISGTLKWPSFGGRLSAQFAAVIGGE 215

Query: 201 RSAFKITANFPAKNKAIS-LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259
              +      P    A     ++    + P+     G   ++ + P  SG   ++     
Sbjct: 216 AVGWAFVCEEPLALFARRNAALKTSLTSAPLTFSFEGTGNFSSQ-PFASGHLQMSAPSLA 274

Query: 260 LL--------NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE 311
            L        + EL      +       +  +++   +L      ++   D   ++   +
Sbjct: 275 ALAAWYRGAPDAELPPGGFSIDTRVTTGETALKLEELQLAIGEATATGVLD--VQLPSGK 332

Query: 312 ENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344
              +  +        +       +  +  ++  
Sbjct: 333 GPRVEGTLAFDRIDLNGLPLATLKPAQGDDRGW 365


>gi|294668240|ref|ZP_06733347.1| AsmA family protein [Neisseria elongata subsp. glycolytica ATCC
           29315]
 gi|291309948|gb|EFE51191.1| AsmA family protein [Neisseria elongata subsp. glycolytica ATCC
           29315]
          Length = 689

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 49/365 (13%), Positives = 112/365 (30%), Gaps = 19/365 (5%)

Query: 4   RVLIGLGFLFSVVLVG-AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           + L+G   L ++        +       + R      A    G+KI  +  I   ++P P
Sbjct: 12  KCLVGGAVLSALAFGAQYALLSWLFSSENVR-RAADGAVAGTGRKIRYRPEINTSVIPRP 70

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +V  K + I      S E  IE + +   +  L  G   V      +P L    S  G  
Sbjct: 71  TVTLKQVEITHPGGASAEISIEEMRVGLSWASLF-GTPSVEKWVFVRPELMLNRSQDGGW 129

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
           N          +    ++++ V+ G + +     D  + L ++NL+I+    +  +  + 
Sbjct: 130 NIRDLLQKEGSLP---VDRLIVEDGHLLLD--TGDSSHTLENINLKINGADESQTTVKAE 184

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG---NLF 239
             +K  + AE    +  + +A ++   +   + A+S +          +I   G      
Sbjct: 185 GRLKTPLWAE-EAEWKFEGTAARLADGWLMPDLALSGRSNYKGDETNFLIGGNGSWRTGG 243

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
                                 + ++ A ++++S     +    +    +    +     
Sbjct: 244 IQLNNARLKIDIPARNLHLNAESPQIKAGETQISAAAANAVLTAQYGGAQWDGTIAAKRL 303

Query: 300 DED----NKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV 355
                     K+S +       ++        LN      +   +     L       + 
Sbjct: 304 TLHPTVAAVEKLSINGSRKTALTQTAFTLDTPLNWQ---RQGGWEMPAAKLTTRLDNITG 360

Query: 356 NKKEE 360
           N +  
Sbjct: 361 NPRPR 365


>gi|332996914|gb|EGK16533.1| hypothetical protein SFK272_4793 [Shigella flexneri K-272]
 gi|333013400|gb|EGK32772.1| hypothetical protein SFK227_4729 [Shigella flexneri K-227]
          Length = 178

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 58/166 (34%), Gaps = 22/166 (13%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           ++   +   F +++V A  +    DW   +    ++ +  + +  A++G + +       
Sbjct: 6   KITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQ 65

Query: 57  -----HILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                  +P+P V  +DI +    D        +  +      L LL+  + +  + +++
Sbjct: 66  ETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEK 125

Query: 110 PHLNFYLSSKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGG 147
           P       S+  +NW            +      +  L+ I    G
Sbjct: 126 PDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQG 171


>gi|15964471|ref|NP_384824.1| hypothetical protein SMc00838 [Sinorhizobium meliloti 1021]
 gi|15073648|emb|CAC45290.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
          Length = 604

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/333 (12%), Positives = 95/333 (28%), Gaps = 27/333 (8%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS-FESKIEG 85
           +  T+ R   ER      G K  + G  ++   P P V      I          ++I  
Sbjct: 41  VSTTEARATMERMLDDWSGGKSTISGEPEVRFWPEPLVTLPATTIVSTGPEPLRLAEIGR 100

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-----QRKSTMDMIHNVILE 140
           ++     L  L GE  + ++ +  P +     + G  NW                     
Sbjct: 101 ITASFSLLSALRGEQALEEITLVDPVITLERGADGAVNWQKPDWLVPPGNAMPRDEAPFG 160

Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200
            I ++ GR +++D+ +                   I   L   S  G + A+       +
Sbjct: 161 DITIENGRFRVVDRLAAT---------GEGVDVAGISGTLKWPSFGGRLSAQFAAVIGGE 211

Query: 201 RSAFKITANFPAKNKAIS-LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259
              +      P    A     ++    + P+     G   ++ + P  SG   ++     
Sbjct: 212 AVGWAFVCEEPLALFARRNAALKTSLTSAPLTFSFEGTGNFSSQ-PFASGHLQMSAPSLA 270

Query: 260 LL--------NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE 311
            L        + EL      +       +  +++   +L      ++   D   ++   +
Sbjct: 271 ALAAWYRGAPDAELPPGGFSIDTRVTTGETALKLEELQLAIGEATATGVLD--VQLPSGK 328

Query: 312 ENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344
              +  +        +       +  +  ++  
Sbjct: 329 GPRVEGTLAFDRIDLNGLPLATLKPAQGDDRGW 361


>gi|237749197|ref|ZP_04579677.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
 gi|229380559|gb|EEO30650.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
          Length = 1359

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 47/368 (12%), Positives = 109/368 (29%), Gaps = 31/368 (8%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-PFPSVFFKDIRIDQKEDGS 78
              +P      +++ + E+ A+  +GK +     I        P V  +++ +   + G 
Sbjct: 60  YVVLPHV---NEYKTEIEKLASESIGKNVRFS-KITASWYGLQPKVDLENVTLSD-DRGK 114

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS-------NWFQRKSTM 131
              +++ +S    +  +   ++R+  + +D+P +N      G         +  ++  + 
Sbjct: 115 EYVRLKNVSAVVSWWSVPLMDLRLASLVVDKPDINISRDRDGRFYVAGILVDPEKQTESG 174

Query: 132 DMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNIISPL-SIDSIKGSV 189
                +   +I V+ G I   D         L   N  +  R       L ++     + 
Sbjct: 175 VADWILKQHEIIVRDGAIHWKDDFRHAAELNLDQFNFAMKNRGRKHRFRLTAVPDAHIAD 234

Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
             +  GN  + R   K++     K         L    +   +DL   L           
Sbjct: 235 SIDIRGNLSHPRFEKKVSDVSKWKGDLYVALPNLNADQWKKYVDLPVELDGGTGSIQVWA 294

Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
               +        L+L   K RL  +  + D      R+ ++ +        +   +   
Sbjct: 295 GVDKSRLTEISAELDLKNLKLRLRKDLPVLDLAFATGRFDMKRL-------VNAGAEDDL 347

Query: 310 DEENLLNFSENGAESMH----DLNETDFF-----EEEEKKNKNDDLKKDDIQYSVNKKEE 360
                 ++  +           LN+  F       E + +     +    +         
Sbjct: 348 QAHPFYSYGVDKLSLKTVLGKVLNDASFTASYLSPEGDNQLAKTKVDVKRLNLGELGNFL 407

Query: 361 KDNSHDKE 368
                DKE
Sbjct: 408 PYLPLDKE 415


>gi|297184459|gb|ADI20574.1| hypothetical protein [uncultured alpha proteobacterium
           EB080_L84F03]
          Length = 183

 Score = 93.4 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 63/182 (34%), Gaps = 15/182 (8%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           R LI L  +  V +  A    L +           Q +   G+ + +     I++ P   
Sbjct: 2   RFLIRLIVIVLVAVAIAIVGLLMLPGEKIARIAADQLSKQTGRAVDISSETSINLYPTLG 61

Query: 64  VFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           V      I   +          + L++  +   L+ G IR+  +    P +    ++ G 
Sbjct: 62  VTTGPASIASADWAKNGPLMTADSLAIGIDVPALIGGTIRITKLEAKSPRIVLERAADGR 121

Query: 122 SNWFQRKST-------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
           +NW    S               D  +++ LE+  +    ++ ID  +     L ++++ 
Sbjct: 122 TNWDLLPSREPVETTEPVNETTEDQSYDLSLERALITDAGLRYIDHGTGTDQDLKNVDID 181

Query: 169 IS 170
           + 
Sbjct: 182 LR 183


>gi|86748018|ref|YP_484514.1| AsmA [Rhodopseudomonas palustris HaA2]
 gi|86571046|gb|ABD05603.1| AsmA [Rhodopseudomonas palustris HaA2]
          Length = 655

 Score = 93.4 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 51/313 (16%), Positives = 103/313 (32%), Gaps = 33/313 (10%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ESKIE 84
           I         + +     G ++A+ G  KI + P  SV   D+ +    D +      I 
Sbjct: 26  IPSGAVTSAIQSRIERDTGYRLAIGGASKISLFPGFSVTLNDVTLQDPNDRNPDSRFTIG 85

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN---VILEK 141
            +        ++SG+ RV ++ + +P L   L  +         S           ++++
Sbjct: 86  RVRAELPLGSVISGKPRVTELTLTKPELRVPLIRERAPTASSPPSPAIRNGRQIDTVIDR 145

Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201
           + V+ G + + +        +  +N +I+      +S +            G      K 
Sbjct: 146 VIVEDGVVVMANAADRVEDRIERINAEITIDAERRVSAV------------GGAQLGGKP 193

Query: 202 SAFKITANFPAKNKA---ISLKIQL-----FPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253
           + F I A+ PA +     + LK++       PLA    + L G L          G    
Sbjct: 194 ATFDIKASPPAADAQPVPVELKLEAPDLLRAPLAAKAEVRLRGALLQINGLSGTLGD--- 250

Query: 254 AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313
            G F+   + +L A K RL     +    + +   +  +  P +    D +  +S     
Sbjct: 251 -GAFNGWASADL-AGKPRL--KLDLDFQRLDLGHPRTPAQPPGAPWS-DARIDLSGLNYV 305

Query: 314 LLNFSENGAESMH 326
                 +      
Sbjct: 306 DAELRLSANALNL 318


>gi|95930610|ref|ZP_01313344.1| protein of unknown function DUF748 [Desulfuromonas acetoxidans DSM
           684]
 gi|95133262|gb|EAT14927.1| protein of unknown function DUF748 [Desulfuromonas acetoxidans DSM
           684]
          Length = 1191

 Score = 93.4 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 40/329 (12%), Positives = 96/329 (29%), Gaps = 42/329 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R LI +  +  ++L+    VP        ++           + + ++   K +  PF
Sbjct: 5   MKRSLITVAVIVGLLLLSMLVVPW-----QVKKQGTAWIAENTERTLTIE---KAYFNPF 56

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + + +          + L +      ++   + +  + ID P++   L  + 
Sbjct: 57  TLKLELSGVTLTEPASDQPFVSWDRLMVAVSLRSIIDQALILRRIEIDHPYVKIDLLGEQ 116

Query: 121 VSNWFQRKSTMDM--------------IHNVILEKIHVKGGRIKIIDQESDQV--YFLSD 164
             N+       D                       I +  G I   DQ S Q   + +  
Sbjct: 117 QFNFSDFMHLGDDAPPPVEPVPEEESGPFLFSFNNIVISDGEIDFNDQASPQSSHHEIRQ 176

Query: 165 LNLQIS-----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
           L L +          +      +  +         G      ++ +   +    N  ++ 
Sbjct: 177 LALSVPVIGNVEYLADEYVTPELAMLLNGADIHAEGQSKPFDNSLETNLSLAFFNTDLAF 236

Query: 220 KIQLFPLAYPII-----IDLFGNL-----FWNEKQPIYSGVFSVAGDFSKLLNLELSAKK 269
             Q  P+A P+      +D   NL          + + +G F+++       + +     
Sbjct: 237 YAQNAPVALPVDVQSGILDCEINLTYLVTKDELPKLLVNGDFALSELVVNEPDGKPLFAM 296

Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSS 298
             L     +   +V    + L  I     
Sbjct: 297 PTLL--LDVEQADVFKQDFTLSLIALFEP 323


>gi|307318977|ref|ZP_07598408.1| AsmA family protein [Sinorhizobium meliloti AK83]
 gi|306895391|gb|EFN26146.1| AsmA family protein [Sinorhizobium meliloti AK83]
          Length = 608

 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 41/333 (12%), Positives = 95/333 (28%), Gaps = 27/333 (8%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS-FESKIEG 85
           +  T+ R   ER      G K  + G  ++   P P V      I          ++I  
Sbjct: 45  VSTTEARATMERMLDDWSGGKSTISGEPEVRFWPEPLVTLPATTIVSTGPEPRRLAEIGR 104

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-----QRKSTMDMIHNVILE 140
           ++     L  L GE  + ++ +  P +     + G  NW                     
Sbjct: 105 ITASFSLLSALRGEQALEEITLVDPVITLERGANGAVNWQKPDWLVPPGNAMPRDEAPFG 164

Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200
            I ++ GR +++D+ +                   I   L   S  G + A+       +
Sbjct: 165 DITIENGRFRVVDRLAAT---------GEGVDVAGISGTLKWPSFGGRLSAQFAAVIGGE 215

Query: 201 RSAFKITANFPAKNKAIS-LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259
              +      P    A     ++    + P+     G   ++ + P  SG   ++     
Sbjct: 216 AVGWAFVCEEPLALFARRNAALKTSLTSAPLTFSFEGTGNFSSQ-PFASGHLQMSAPSLA 274

Query: 260 LL--------NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE 311
            L        + EL      +       +  +++   +L      ++   D   ++   +
Sbjct: 275 ALAAWYRGSPDAELPPGGFSIDTRVTTGETALKLEELQLAIGEATATGVLD--VQLPSGK 332

Query: 312 ENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344
              +  +        +       +  +  ++  
Sbjct: 333 GPRVEGTLAFDRIDLNGLPLATLKPAQGDDRGW 365


>gi|158520972|ref|YP_001528842.1| hypothetical protein Dole_0955 [Desulfococcus oleovorans Hxd3]
 gi|158509798|gb|ABW66765.1| protein of unknown function DUF748 [Desulfococcus oleovorans Hxd3]
          Length = 1040

 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 46/326 (14%), Positives = 98/326 (30%), Gaps = 33/326 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-F 61
           +R+L+  G  F+V     F    F+           +    +G+ +AV+   KI   P  
Sbjct: 6   KRILVIAGICFAV----YFIAIFFVASAVLTRMAPEKLAEFLGRPVAVE---KIRANPLT 58

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            SV    + I  K       + E L + AE   L+   + +  + +++P ++    S   
Sbjct: 59  LSVTVYGLEIKDKNKTDPFVRFEKLYVNAEAWSLIRRGLVLKRVLLEKPEIHVARLSGAT 118

Query: 122 SNWFQR------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
            N+               + +        +  I V  G +   D    + + +S +N Q+
Sbjct: 119 FNFSDLLAGEKEEENPAEEKSPAEPFGFAVANISVVDGTVVYRDLPFGKTHTISPINWQV 178

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
                       I      +    T + D    +  +       +    + + L  ++ P
Sbjct: 179 P------FISNFIRHRNRKLEPALTLSVDGATLSVDVQTKPFKNSMETVVDMALSGVSIP 232

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN-----LELSAKKSRLSGNFKISDGNVR 284
                        +        +    F K  +     ++  A    L    +  DG   
Sbjct: 233 RYTAYMPKDRIGFQVEQGDVDITTQISFYKENDRSVVTVQGQAAIVDLDVKDREGDGLFT 292

Query: 285 ISRYKLQSILP--NSSTDEDNKTKVS 308
           + R  +  +      S     + +V 
Sbjct: 293 LPRLAVTVLPSVVTESRLHVGEVQVQ 318


>gi|260219866|emb|CBA26826.1| hypothetical protein Csp_G38580 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 625

 Score = 92.6 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 38/323 (11%), Positives = 99/323 (30%), Gaps = 30/323 (9%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGL 86
            D    + +  R       + + + G  ++ + P   +    + + ++   +  + ++  
Sbjct: 2   FDGDKIKAEISRTVLEQKQRTLVIAGKPQLSVWPDVGIQLDGVTLSERGSSTEFAALKSA 61

Query: 87  SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-------------KSTMDM 133
            M    +PLLS +++V  + +            G  N                  +    
Sbjct: 62  RMSVAVMPLLSKQVQVRALDVTGLKATLIKRKDGSLNIADLLGDPSAQPAPANVPAQPAE 121

Query: 134 IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193
              + +  I +   ++   D++      +++L+L       +  +  + +  K S+  +G
Sbjct: 122 PLKIDVAAIRIADAQLTWRDEQVGSTTNINNLSLSTGHVQADTGAKTA-NIEKLSLAIKG 180

Query: 194 TGNFDNKRSAFKIT--ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI----- 246
               D    A      A  PA++   ++ +            L   L   E         
Sbjct: 181 QAGADGFSLALDAPKLALSPARSSGEAVTLSAGVQGSGRSALLKLVLSGVEGNVDAIRIS 240

Query: 247 -YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
             +G   +A     +  L L      L+G+ +++      +            ++   K 
Sbjct: 241 KLTGSLDLAHPDMPMKQLSLP-----LNGSLQVNLAQQSAALALATKF---DESNIATKL 292

Query: 306 KVSQDEENLLNFSENGAESMHDL 328
            V++     L F  +  +   D 
Sbjct: 293 NVARFAPLSLGFDLDIDQLNVDK 315


>gi|134096170|ref|YP_001101245.1| hypothetical protein HEAR3014 [Herminiimonas arsenicoxydans]
 gi|133740073|emb|CAL63124.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 1112

 Score = 92.6 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 40/343 (11%), Positives = 101/343 (29%), Gaps = 45/343 (13%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61
           R  +    F+  + L G F +P  I     +   E+  T  + ++  +    K+ + P+ 
Sbjct: 23  RSAIGVFAFVVLLGLFGYFALPGII-----KSQAEQLITEKLHRQTTIG---KVEVNPYA 74

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             V   D+++ + E  +  +  E L +   +  L      V  + +  P+++        
Sbjct: 75  MQVTIHDMKLLEPEGDAVFASFEKLMVNVSYQSLFRLAPVVQQVQLSAPYIHLVRKDATH 134

Query: 122 SNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
            N          +          +  I +  GRI+  D+ +  V+ ++DL + +      
Sbjct: 135 YNIDDIIELINSQPPSPEPARFSVFNIELDKGRIEFDDRPAQTVHKIADLKIGVPFVSSL 194

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY------- 228
                    +   V    + + +      K   +  A      + + L  +         
Sbjct: 195 P------SQVDVYVEPLLSASINGSPLLIKGKTHPFADTVDAVVDLNLDNMDLTSYLKYI 248

Query: 229 ---------PIIIDLFGNLFWNEKQPI-----YSGVFSVAGDFSKLLNLELSAKKSRLSG 274
                       +DL     +++ +        +G   +        +     K   LS 
Sbjct: 249 PGTPHFKIPSARLDLHMTATFSQPKKQAPSLLLNGDIKLKSLQVNDESGNSIVKLPELSI 308

Query: 275 NFKIS---DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314
               +        I++  +  I  + +   + +          
Sbjct: 309 TLNEARVLSERFEIAKLSISGIAADITRKANGRFNFDNLLTPP 351


>gi|237714229|ref|ZP_04544710.1| outer membrane assembly protein [Bacteroides sp. D1]
 gi|262408395|ref|ZP_06084942.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294647540|ref|ZP_06725119.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
 gi|294808577|ref|ZP_06767321.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
 gi|229445721|gb|EEO51512.1| outer membrane assembly protein [Bacteroides sp. D1]
 gi|262353947|gb|EEZ03040.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292637108|gb|EFF55547.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
 gi|294444220|gb|EFG12943.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 841

 Score = 92.6 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/385 (10%), Positives = 100/385 (25%), Gaps = 55/385 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------ 55
           +++ L        V+++  F +P       F+            K +  +   K      
Sbjct: 1   MKKGLKIAAITVGVIIILMFLLPF-----AFQGKIADIVKTEGNKMLNAQFDFKNLNISL 55

Query: 56  IHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112
               P  SV  +D  +    +       +   ++       L       +  ++I+   L
Sbjct: 56  FRNFPQASVTLEDFWLKGTGEFANDTLVQAGEVTAAVNLFSLFGDSGYDISKIFIEDTKL 115

Query: 113 NFYLSSKGVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           +  +   G +NW               +        V L++  +K   +   DQ+     
Sbjct: 116 HAIILPDGRTNWDIMKPDTIATVETPAEEEASSPFKVKLQRFVIKNMNLIYDDQQGKMYA 175

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            + D N   +    +  + L +++   S+  +  G      +      +  A        
Sbjct: 176 DIRDFNAICAGDLGSERTTLKLEAETKSLTYKMNGIPFLANANISAKMDVDADLANNKYT 235

Query: 221 IQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
           ++   +    I   + G +   +         +      K +   + A            
Sbjct: 236 LKDNTIRLNAIQAGIDGWVALKDPAIDMDLKLNTNDIGFKEILSLIPA------------ 283

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339
              +  + +        ++     K  +  D     N      ++M              
Sbjct: 284 ---IYATEFSSLKTDGTATLTATAKGILQGDTVPAFNIDMQVKDAMF------------- 327

Query: 340 KNKNDDLKKDDIQYSVNKKEEKDNS 364
           +        D I  S N +    N 
Sbjct: 328 RYPALPAGVDQINISANVQNPGGNI 352


>gi|186477256|ref|YP_001858726.1| hypothetical protein Bphy_2507 [Burkholderia phymatum STM815]
 gi|184193715|gb|ACC71680.1| conserved hypothetical protein [Burkholderia phymatum STM815]
          Length = 1419

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 92/322 (28%), Gaps = 30/322 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI- 58
           LR +L    FL+ VV++    +   +      FR   E   +  +  ++ + G I  H  
Sbjct: 31  LRVLLGIALFLYFVVVLAVLGLRYVVLPRVDSFRPQIESAVSEKIHAQLRI-GKIAPHWT 89

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
              P +   D+ I  +E       I   S    +  +      +  + +D+P L      
Sbjct: 90  GFQPGIEVTDVTITNREGKV-ALTIPHASATVSWSSIWKLAPILSSVIVDKPDLLIERER 148

Query: 119 KGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQIS 170
            G               +       +  + + ++GG ++  D   D     L D+ L I 
Sbjct: 149 DGSLTVAGVMVPTTHSGNDTFSTWLLRQQAMILRGGTLRWHDARRDAPEIALQDIRLAIL 208

Query: 171 ARFLNI----ISPLSIDSIKGSVIAEGT---GNFDNKRSAFKITANFPAKNKAISLKIQL 223
           +   +      +P     + G +    +               T        ++ L +  
Sbjct: 209 SDGYDHRLALQAPPDGKVLFGPLDFRASFRHARLAAMGKPVNWTGEAYISTGSVDLPMLA 268

Query: 224 FPLAYPI-IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS---GNFKI- 278
             + +PI             +        +        + L +   + +L      F   
Sbjct: 269 RYIDFPIETYAGRVANKIWLQFAQGHVRSASGEASGNNIALRVKPTQPKLDVPVAQFSWA 328

Query: 279 -----SDGNVRISRYKLQSILP 295
                 +  + +   + +   P
Sbjct: 329 VAHDGDEWTLDLDDLRAEFGQP 350


>gi|187477332|ref|YP_785356.1| hypothetical protein BAV0827 [Bordetella avium 197N]
 gi|115421918|emb|CAJ48438.1| putative exported protein [Bordetella avium 197N]
          Length = 1153

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 101/307 (32%), Gaps = 19/307 (6%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR     G +  VVL  A      +     R         ++G++++V G I  +     
Sbjct: 12  RRCAKIFGTVVLVVLGLAGLAAWQL-PKVLRSALTHDVAAMLGREVSV-GDIAFNPF-TL 68

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           ++  +D+ I Q +  +   K+  + + A +  L      +  + +  P L          
Sbjct: 69  TLRAQDLAIAQPQSQTALLKVGLVEVSAAWRSLFWFAPVLDRVRVVAPQLALTREDLLRF 128

Query: 123 NW-------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
           N+              +  +    +    L +  ++GGRI++ D+ S +   + D++L +
Sbjct: 129 NFSDIQQKLAASETSAEPDTPPAGLPRFALHRFSLEGGRIELDDKVSGRKQRIDDMSLSL 188

Query: 170 SARFLNIISPLSIDSIKGSVIAEGT-GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
                              +   G+  +       F    +     +   L +Q +   +
Sbjct: 189 PFLSTFGHDRDVDLRPAVHMRINGSPLDIGGVARPFDALPSAKLDLRVEGLGLQQWADIW 248

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
           P  +DL   L           V+  A D      L   A   +L+         +R S  
Sbjct: 249 P--LDLPLILDRALLDSRLQLVYQQAADGPPAFKLTGEAGLRQLNVRETSGAELLRWSAL 306

Query: 289 KLQSILP 295
            L++IL 
Sbjct: 307 NLRNILS 313


>gi|298482088|ref|ZP_07000276.1| outer membrane assembly protein [Bacteroides sp. D22]
 gi|298271645|gb|EFI13218.1| outer membrane assembly protein [Bacteroides sp. D22]
          Length = 841

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/385 (10%), Positives = 100/385 (25%), Gaps = 55/385 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------ 55
           +++ L        V+++  F +P       F+            K +  +   K      
Sbjct: 1   MKKGLKIAAITVGVIIILMFLLPF-----AFQGKIADIVKTEGNKMLNAQFDFKNLNISL 55

Query: 56  IHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112
               P  SV  +D  +    +       +   ++       L       +  ++I+   L
Sbjct: 56  FRNFPQASVTLEDFWLKGTGEFANDTLVQAGEVTAAVNLFSLFGDSGYDISKIFIEDTKL 115

Query: 113 NFYLSSKGVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           +  +   G +NW               +        V L++  +K   +   DQ+     
Sbjct: 116 HAIILPDGRANWDIMKPDTIATVETPAEEEASSPFKVKLQRFVIKNMNLIYDDQQGKMYA 175

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            + D N   +    +  + L +++   S+  +  G      +      +  A        
Sbjct: 176 DIRDFNAICAGDLGSERTTLKLEAETKSLTYKMNGIPFLANANISAKMDVDADLANNKYT 235

Query: 221 IQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
           ++   +    I   + G +   +         +      K +   + A            
Sbjct: 236 LKDNTIRLNAIQAGIDGWVALKDPAIDMDLKLNTNDIGFKEILSLIPA------------ 283

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339
              +  + +        ++     K  +  D     N      ++M              
Sbjct: 284 ---IYATEFSSLKTDGTATLTATAKGILQGDTVPAFNIDMQVKDAMF------------- 327

Query: 340 KNKNDDLKKDDIQYSVNKKEEKDNS 364
           +        D I  S N +    N 
Sbjct: 328 RYPALPAGVDQINISANVQNPGGNI 352


>gi|220926151|ref|YP_002501453.1| AsmA family protein [Methylobacterium nodulans ORS 2060]
 gi|219950758|gb|ACL61150.1| AsmA family protein [Methylobacterium nodulans ORS 2060]
          Length = 611

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 57/336 (16%), Positives = 103/336 (30%), Gaps = 30/336 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R +L+  G   ++VL  A      +     R    R      G     +G   + +LP P
Sbjct: 31  RSILVLCGGASALVLAAAACQSWTVATPAARAFVGRHLARAYGLTFEAQGPTTLALLPAP 90

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            + F+ +R+     G   ++   L ++     LL+G+     + +    L         +
Sbjct: 91  RLRFQHVRVLN--GGRLLAESRSLEVQLGLGALLTGQAEAAALTLAGTRLVLPEDDDRWA 148

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
               R +         L ++ V  GRI   +  SD+   L DL L +S            
Sbjct: 149 GPLARLTARLADGARPLRRLSVTEGRITAGESGSDR---LGDLTLSVSWPRAGAG----- 200

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP-IIIDLFGNLFWN 241
                 +   G  ++    +     A  P      +       +A+P   +DL G   W 
Sbjct: 201 ------LDLSGRFSWRGVPTHVVFAAARPLDLAMGTPSPVRATIAWPSGSLDLDGTGSWQ 254

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRISRYKLQSI 293
              P  +G               + A+           L G F+     + +   +L   
Sbjct: 255 -GGPALAGEGRFTTRALSETLAWVGARAPLAPALGRVTLEGRFEARPDTLAMPSLRLVL- 312

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
              + T  D     +   +  L  S   A    DL+
Sbjct: 313 ---ADTVLDGAGAATLGPDGRLALSGTLAAERLDLS 345


>gi|325106519|ref|YP_004276173.1| AsmA family protein [Pedobacter saltans DSM 12145]
 gi|324975367|gb|ADY54351.1| AsmA family protein [Pedobacter saltans DSM 12145]
          Length = 885

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 95/277 (34%), Gaps = 19/277 (6%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58
           M ++++I +  +F V+L+   ++PLF          +      +  K+  K  I + I  
Sbjct: 1   MSKKIIITISLIFVVILLAVASIPLFF-KDTIVSKVKNTINENLNAKVNFK-DIDLTIIS 58

Query: 59  -LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNF 114
             P   +   D  I   +       +KI+ L +    + ++ G+  ++ ++ +D+P +  
Sbjct: 59  SFPQLGLKLNDFEIVGVDSFSTDTLAKIKNLQLNLNLMSVIKGDKYQINEVKLDEPKIYA 118

Query: 115 YLSSKGVSNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
            +   G +NW            + T        L+K  +K G I   D   +    L+++
Sbjct: 119 RVLKSGKANWDIVKSDSTKTSPQDTTASSFKAALKKYEIKNGNIIYDDASLNFYMALNNI 178

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
           N      F   +  L  +S    +  +  G         +           +   ++   
Sbjct: 179 NHSGKGDFTQDLFVLDTESNIEKLTVKYGGIPYLNGVHLEAGLPLDIDLAKMKFTLKENT 238

Query: 226 LAYP-IIIDLFGNLFWNEKQP-IYSGVFSVAGDFSKL 260
           +    +++ L G+L        +    F       K 
Sbjct: 239 IKLNELVLSLVGSLAMPNDTDMVIDVKFDAEKSDLKN 275


>gi|319408120|emb|CBI81773.1| AsmA family [Bartonella schoenbuchensis R1]
          Length = 618

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/332 (10%), Positives = 88/332 (26%), Gaps = 51/332 (15%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67
               +  ++      +P  +     R    +  +   G  + ++   ++ + P+P  F  
Sbjct: 4   VFVAVVFLLGTSVIVLPYLVSTDAIRVRMAQDLSAWTGYNVQLREPPRLKLFPYPKAFLS 63

Query: 68  DIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS--------- 117
            I +  K +D +   + E + +    + LL G +   +  I  P                
Sbjct: 64  GITLTSKIDDVAPLMEAESIEVDLSLIDLLRGCVSFSETRIVHPQFVMEKPFKTVSDFFN 123

Query: 118 -------------SKGVSNWFQRKSTMDMIHNVI--LEKIHVKGGRIKIIDQESDQVYFL 162
                                      D+   +     +I ++ G +   D  SD    +
Sbjct: 124 TLSRSQGTLGLAVRNAREIVKLNPDQPDIESLLNQPFGRIVIENGVLIYRDSVSDVTEKI 183

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP---AKNKAISL 219
           + LN           + +       +        +  + +   I A+           SL
Sbjct: 184 TGLN-----------ATIDWSESTQAARFRANARWHGELTELLINADQALLLLAGGQSSL 232

Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS-----AKKSRL-- 272
           ++    L   I       L    +  I+ G  S+           +        + +L  
Sbjct: 233 RVSFNSLRGGITFTGKARLS---EYYIFDGKVSMRSPGWNQTLAWIGGNQFWGGRLKLPI 289

Query: 273 --SGNFKISDGNVRISRYKLQSILPNSSTDED 302
               +F      + ++         N+    +
Sbjct: 290 VWESHFLAQPKRIEMNNITFNMGAANARGALE 321


>gi|78355272|ref|YP_386721.1| hypothetical protein Dde_0225 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78217677|gb|ABB37026.1| hypothetical protein Dde_0225 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 1261

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 78/306 (25%), Gaps = 28/306 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61
           +  ++ L  L +V   G F    F+     R+  E   +  +G+  +V G   +   PF 
Sbjct: 15  KLAILWLAGLLAVWTAGGF----FLVPHIARDAVESNLSQALGRNCSVGG---MSFNPFT 67

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            SV  +D  + +K+          +    +   +      +  + ID+  ++     KG 
Sbjct: 68  LSVELRDTAVLRKDGSGPFISFRSVRAAPDITTIFYRAPVIRYISIDRLAVSLEFMGKGQ 127

Query: 122 SNWFQRKSTMDMIHN-----------VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
            N+                         +    +    I   D      + ++DLNLQ+ 
Sbjct: 128 YNFSDLMPPSAEARPEDSGQDDAVFPFAVRNFMLTNSSIVFRDTPHGITHTVTDLNLQVP 187

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL---A 227
                  +          V        +     F+                    +    
Sbjct: 188 ------FTSSLAGDRDAPVEPRMNATVNGNAVDFEGRIVPFGNKLRTDFIFAADNIELKD 241

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
           Y   I     L     +   +  FS A   S  L              +      +    
Sbjct: 242 YWQYIPAGIPLELASGRLSTAVNFSFAEQASGSLLHISGNGTLADVALYDGKKKVLGFDA 301

Query: 288 YKLQSI 293
           +     
Sbjct: 302 FSYDIG 307



 Score = 36.0 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 22/232 (9%), Positives = 63/232 (27%), Gaps = 10/232 (4%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           SV  +D+ +         + +  L++        +  +    + +++P L+      G+ 
Sbjct: 726 SVAVRDVLVRDAMHKDGIASLGSLAVNGIAFDGAAETLSAETVRLEKPKLDILREQDGML 785

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL-----SDLNLQISARFLNII 177
           N       +     V +    V    +        +   +     +D ++Q+       +
Sbjct: 786 NL----QRVLRAGPVQVNATAVADATVTADVTGIPEEESVLPQTGADGDVQMRVAVNATM 841

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
                     +  A    +F + R      ++     + +S+          +   L   
Sbjct: 842 PGAPASDKDSASPAGLEKHFSDVRLGGAFISDGTVHFRDVSVSPPFELTLAGLNATLSSV 901

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
                 +P       + G    L            S +  +   N+ +  + 
Sbjct: 902 SLSAASRPDLRVDGRLNGVPLTLQGALNPLVSPPYS-DLALRIANLDLVAFS 952


>gi|295086692|emb|CBK68215.1| AsmA family. [Bacteroides xylanisolvens XB1A]
          Length = 841

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/385 (10%), Positives = 100/385 (25%), Gaps = 55/385 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------ 55
           +++ L        V+++  F +P       F+            K +  +   K      
Sbjct: 1   MKKGLKIAAITVGVIIILMFLLPF-----AFQGKIADIVKTEGNKMLNAQFDFKNLNISL 55

Query: 56  IHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112
               P  SV  +D  +    +       +   ++       L       +  ++I+   L
Sbjct: 56  FRNFPQASVTLEDFWLKGTGEFANDTLVQAGEVTAAVNLFSLFGDSGYDISKIFIEDTKL 115

Query: 113 NFYLSSKGVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           +  +   G +NW               +        V L++  +K   +   DQ+     
Sbjct: 116 HAIILPDGRANWDIMKPDTIATVETPAEEEASSPFKVKLQRFVIKNMNLIYDDQQGKMYA 175

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            + D N   +    +  + L +++   S+  +  G      +      +  A        
Sbjct: 176 DIRDFNAICAGDLGSERTTLKLEAETKSLTYKMNGIPFLANANISAKMDVDADLANNKYT 235

Query: 221 IQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
           ++   +    I   + G +   +         +      K +   + A            
Sbjct: 236 LKDNTIRLNAIQAGIDGWVALKDPAIDMDLKLNTNDIGFKEILSLIPA------------ 283

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339
              +  + +        ++     K  +  D     N      ++M              
Sbjct: 284 ---IYATEFSSLKTDGTATLTATAKGILQGDTVPAFNIDMQVKDAMF------------- 327

Query: 340 KNKNDDLKKDDIQYSVNKKEEKDNS 364
           +        D I  S N +    N 
Sbjct: 328 RYPALPAGVDQINISANVQNPGGNI 352


>gi|150377127|ref|YP_001313723.1| AsmA family protein [Sinorhizobium medicae WSM419]
 gi|150031674|gb|ABR63790.1| AsmA family protein [Sinorhizobium medicae WSM419]
          Length = 1013

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/346 (13%), Positives = 115/346 (33%), Gaps = 22/346 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RRV++ +    ++ +     +P  I     R +  RQ +   G  IA  G +K    P 
Sbjct: 1   MRRVILCVLGAAALAVTAIAILPSLISSDWMRAELGRQLSSATGSSIAFNGPVKFSAFPS 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF-YLSSKG 120
            +V  KD+ +  +  G   ++   ++    F  L +  +R+ ++ +D+P +     ++  
Sbjct: 61  LAVVAKDVTLSAEAQGVT-AEFAEVTGSVAFSSLWADRLRIEEISVDRPVIILDEKAADE 119

Query: 121 VSNWFQRKSTMDMIHNV----------ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
            +   +          +           ++ + +  G   I    + +   +SD+ L +S
Sbjct: 120 TTPVQEGSGEARSSDPLPDLAALLERSAIDSVSITSGTF-IRRSAARREEVVSDVELTLS 178

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
              ++    LS  +  G +  E +          +        +  ++++    P     
Sbjct: 179 IPDIDDTFSLSASARMGELTYEASFTIS----TLRSLLGRQPADLDLTVEADPAPAPGLT 234

Query: 231 IIDLFGNLFWNEKQ--PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
            +   G +  N      I  G          L  L +  K++R   +       + ++ +
Sbjct: 235 SLSASGQVTLNANGSYQIRGGKVETGEQAFGLNALFVPGKRARFLADLDAD--RLDLTPF 292

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334
              +   + S      TK        L F     ++   +N     
Sbjct: 293 VDTTPAASPSKVLSTGTKTDAGNRVGLQF-LASFDADVSINAAAIT 337


>gi|293370411|ref|ZP_06616965.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
 gi|292634559|gb|EFF53094.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
          Length = 842

 Score = 91.9 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/386 (11%), Positives = 100/386 (25%), Gaps = 56/386 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------ 55
           +++ L        V+++  F +P       F+            K +  +   K      
Sbjct: 1   MKKGLKIAAITVGVIIILMFLLPF-----AFQGKIADIVKTEGNKMLNAQFDFKNLNISL 55

Query: 56  IHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112
               P  SV  +D  +    +       +   ++       L       +  ++I+   L
Sbjct: 56  FRNFPQASVTLEDFWLKGTGEFANDTLVQAGEVTAAVNLFSLFGDSGYDISKIFIEDTRL 115

Query: 113 NFYLSSKGVSNWFQRKST-------------MDMIHNVILEKIHVKGGRIKIIDQESDQV 159
           +  +   G +NW   K                     V L++  +K   +   DQ+    
Sbjct: 116 HAIVLPDGRANWDIMKPDTTATAEAPVSEEEASSPFKVKLQRFVIKNMNLIYDDQQGKMY 175

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
             + D N   +    +  + L +++   S+  +  G      +    T +  A       
Sbjct: 176 ADIRDFNAVCAGDLGSDRTTLKLEAETKSLTYKMNGIPFLANANISATMDVDADLANNKY 235

Query: 220 KIQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278
            ++   +    I   + G +   +         +      K +   + A           
Sbjct: 236 TLKDNTIRLNAIQAGIDGWVALKDPAIDIDLKLNTNDIGFKEILSLIPA----------- 284

Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE 338
               +  + +        ++     K  +  D     N       +M             
Sbjct: 285 ----IYATEFSSLKTDGTATLTATAKGILQGDTVPAFNIDMQVKNAMF------------ 328

Query: 339 KKNKNDDLKKDDIQYSVNKKEEKDNS 364
            +        D I  S N +    N 
Sbjct: 329 -RYPALPAGVDQINISANVQNPGGNI 353


>gi|260171738|ref|ZP_05758150.1| outer membrane assembly protein [Bacteroides sp. D2]
 gi|315920050|ref|ZP_07916290.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313693925|gb|EFS30760.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 842

 Score = 91.9 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/386 (11%), Positives = 100/386 (25%), Gaps = 56/386 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------ 55
           +++ L        V+++  F +P       F+            K +  +   K      
Sbjct: 1   MKKGLKIAAITVGVIIILMFLLPF-----AFQGKIADIVKTEGNKMLNAQFDFKNLNISL 55

Query: 56  IHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112
               P  SV  +D  +    +       +   ++       L       +  ++I+   L
Sbjct: 56  FRNFPQASVTLEDFWLKGTGEFANDTLVQAGEVTAAVNLFSLFGDSGYDISKIFIEDTRL 115

Query: 113 NFYLSSKGVSNWFQRKST-------------MDMIHNVILEKIHVKGGRIKIIDQESDQV 159
           +  +   G +NW   K                     V L++  +K   +   DQ+    
Sbjct: 116 HAIVLPDGRANWDIMKPDTTATAEAPVSEEEASSPFKVKLQRFVIKNMNLIYDDQQGKMY 175

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
             + D N   +    +  + L +++   S+  +  G      +    T +  A       
Sbjct: 176 ADIRDFNAVCAGDLGSDRTTLKLEAETKSLTYKMNGIPFLANANISATMDVDADLANNKY 235

Query: 220 KIQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278
            ++   +    I   + G +   +         +      K +   + A           
Sbjct: 236 TLKDNTIRLNAIQAGIDGWVALKDPAIDMDLKLNTNDIGFKEILSLIPA----------- 284

Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE 338
               +  + +        ++     K  +  D     N       +M             
Sbjct: 285 ----IYATEFSSLKTDGTATLTATAKGILQGDTVPAFNIDMQVKNAMF------------ 328

Query: 339 KKNKNDDLKKDDIQYSVNKKEEKDNS 364
            +        D I  S N +    N 
Sbjct: 329 -RYPALPAGVDQINISANVQNPGGNI 353


>gi|218508183|ref|ZP_03506061.1| hypothetical conserved membrane protein [Rhizobium etli Brasil 5]
          Length = 149

 Score = 91.9 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 42/121 (34%), Gaps = 2/121 (1%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66
           + L     + +      P  I     R   E   +   G +  ++G   +   P P +  
Sbjct: 29  VLLLIALGLFVALRVAAPYLITTGFVRSGIEDALSKWTGYQAEIQGDPVLEFWPTPRITL 88

Query: 67  KDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124
            ++ I Q          +IE LS     +  L G     + ++ +P+L      KG+ +W
Sbjct: 89  NEVTIRQPRESGDKLLGRIESLSADFSLIDALRGRTSFHEFHLLRPNLALTRDEKGLIDW 148

Query: 125 F 125
            
Sbjct: 149 S 149


>gi|319405182|emb|CBI78787.1| AsmA family [Bartonella sp. AR 15-3]
          Length = 626

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 56/402 (13%), Positives = 124/402 (30%), Gaps = 61/402 (15%)

Query: 1   MLRRVLIGLGFLFSVVL----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           M  +++  L  +F  ++         +P  +     R    +  ++  G  + ++   ++
Sbjct: 1   MCIKIIKFLSGIFIAIVFLGGAAVIILPYIVSTDAIRIRLAQDLSVWTGYNVQLRDPPRL 60

Query: 57  HILPFPSVFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
            I P+P  F   + +  K E+ +   ++E + +    + LL G I   +  I  P     
Sbjct: 61  KIFPYPKAFLSGVTLTPKIENIAPLMEVESIEVDLSLVSLLWGHISFSETRIMYPKFVMD 120

Query: 116 LSSKGVSNWFQR-------------------KSTMDMIHNVIL-----EKIHVKGGRIKI 151
              K VS++F                     K   D      L      +I ++ G +  
Sbjct: 121 KPVKTVSDFFDTLLRSQGALGLAIQNAREVIKHNPDNPDVASLLNQPFGRIIIENGTLMY 180

Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP 211
            D  S  +  +++LN           + +    +  ++       +  + +   I A+  
Sbjct: 181 RDGVSSVMEQITELN-----------ASIDWPGLTQALQFHAKARWHGELTELLINADQA 229

Query: 212 ---AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS-- 266
                     LKI    +   I  +    L    +  I+ G  S+           +   
Sbjct: 230 LFLLAGGKSLLKISFNSVRGGITFEGQARLS---EYYIFDGKVSLRSPGWDQTVAWIGGN 286

Query: 267 ------AKKSRL-SGNFKISDGNVRISRYKLQSILPNS----STDEDNKTKVSQDEE--N 313
                  K   +   +F      +R++   L     N+      D  N+  +       +
Sbjct: 287 QFWGHELKIPIVWESHFLAQPARIRMNNVILMMGTANARGALEFDFKNRVPILIGSLGFD 346

Query: 314 LLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV 355
            L+F+   +       E +FF          D++    Q  +
Sbjct: 347 KLDFNIMKSLFFCSKQENEFFNLAFLNQIGLDIRLSASQAKI 388


>gi|77918917|ref|YP_356732.1| hypothetical protein Pcar_1313 [Pelobacter carbinolicus DSM 2380]
 gi|77545000|gb|ABA88562.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
          Length = 809

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/328 (10%), Positives = 107/328 (32%), Gaps = 30/328 (9%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE 84
             I     RE     A   + + + + G I I +     +   D+ +  KE  +   +  
Sbjct: 28  FLISSEQVREAVLPLAKNALQRDVVL-GDIDISLFS--GIVLHDLTVMDKEGRTPFVEAG 84

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------------FQRK 128
            + +R  F PLL  ++ V ++ ++QP L    ++ G  N+                   +
Sbjct: 85  TVRLRYRFWPLLKLKVVVDEIGLEQPRLRVVRNADGSFNFSDLLQRKQTAGSQIQTSASE 144

Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQ----VYFLSDLNLQISARFLNIISPLSIDS 184
           +      ++++ ++ +  G+++ +D + +        L++  ++        + P+  + 
Sbjct: 145 TGEGRSFDLLVSEVLLSDGKVQFVDYQPNPDNPFTLELTEFKVRAENISATHVFPIEAEV 204

Query: 185 IKGSVIAEGTGNFDNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                    +G  D      ++     +  A + +   + Q       + I+   ++   
Sbjct: 205 AINQARLAASGQVDPSAKGGQLKIHLTDLNAPDFSAYYQKQKAVGLKALKINADLDVEGT 264

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKK---SRLSGNFKISDGNVRISRYKLQSILPNSS 298
             Q   +G   + G   +         +     L  + ++      +   +   ++    
Sbjct: 265 VGQLHTAGRIVLDGLHLEPAATSGRTIRDLDISLDYDLELDRSAGVVDLKRGHLLVGGLP 324

Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMH 326
            D   + +        ++ + + +    
Sbjct: 325 VDVQGRAE-PFGGTPSVDGTLSLSRLDL 351


>gi|119116611|dbj|BAF40877.1| hypothetical protein [Photobacterium phosphoreum]
          Length = 1305

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/335 (11%), Positives = 109/335 (32%), Gaps = 16/335 (4%)

Query: 2   LRRVLIGLGFLF---SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58
           L++V +          V + G     + +D +  R +  +  T  + +K  +KG + + +
Sbjct: 18  LKKVAVWTIVALLTPIVTISGVLAYGVKLDLSTHRSEINQWLTKTLDRKTDIKGSMALTL 77

Query: 59  LPFPSVFFKDIRIDQ--KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
              P +   D+ I                ++ +   LPLL   +++  + +    LN   
Sbjct: 78  SFSPEIELSDVTIANLKSMPWQPMLSSGYIAAKISVLPLLQNTLKIDYLNLKDISLNLLR 137

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
             +G  NW  +K                   ++ + +  + +   ++  + Q    + + 
Sbjct: 138 DQQGHENWVFKKQPTPSKQPSSSTAF-----KLVLSNNINAEKVRVNYED-QAKNTYYDG 191

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
                  +     +    G+         +T +          ++          +D+  
Sbjct: 192 YLDHLALTKPDKWLLVAQGDAMGSEYNLSLTGDLQKLINNQHGQLFAKGSFAGAELDVDA 251

Query: 237 NL----FWNEKQPIYSGVFSVAGDFSKLLNLELS-AKKSRLSGNFKISDGNVRISRYKLQ 291
           N+      ++     S  +      + LL+L+L       ++     S+        +++
Sbjct: 252 NITPFSSGDDSTANISLNWKDTNQIASLLDLDLQHVAPLSITTELSASNKGFAFKDIQVR 311

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
           S + +++   + +   +  + N++N   +  E   
Sbjct: 312 SPITSANGHINVRFAQNAQQLNIINGKLDIPEIDL 346


>gi|253570091|ref|ZP_04847500.1| outer membrane assembly protein [Bacteroides sp. 1_1_6]
 gi|251840472|gb|EES68554.1| outer membrane assembly protein [Bacteroides sp. 1_1_6]
          Length = 838

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/377 (9%), Positives = 102/377 (27%), Gaps = 36/377 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-- 59
           +++ L     +  V+++    +P            + +   ++  +   K  + I +   
Sbjct: 1   MKKGLKIAAIVVGVIIILMLLLPFAFQ-GKIAGIVKTEGNKMLNAQFDFK-KLNISLFRN 58

Query: 60  -PFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFY 115
            P  SV  +D  +    +       +   ++       L       +  ++I+   L+  
Sbjct: 59  FPQASVTLEDFWLKGAGEFANDTLVQAGEVTATINLFSLFGDSGYDISKVFIEDTRLHAI 118

Query: 116 LSSKGVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
           +   G +NW                        V L++  +K   +   DQ+      + 
Sbjct: 119 VLPDGRANWDIMKPDTTDTQETPAAEEDSSPFKVKLQRFVIKNMNLIYDDQQGKMYADIR 178

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
           D N   +    +  + L +++   S+  +  G      +      +  A        ++ 
Sbjct: 179 DFNALCAGDLGSDRTTLKLEAETKSLTYKMNGIPFLANANISAKMDVDADLANNKYTLKD 238

Query: 224 FPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
             +    I   + G +   +         +      K +   + A               
Sbjct: 239 NTIRLNAIQAGIDGWVELKDPAIDMDLKLNTNDVGFKEILSLIPA--------------- 283

Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342
           +  + +        ++     K  +  D     N       +M          ++   N 
Sbjct: 284 IYATEFSSLKTDGTATLAASAKGTLQGDTVPAFNIDMQVKNAMFRYPALPAGVDQININA 343

Query: 343 NDDLKKDDIQYSVNKKE 359
           N      +I  +  +  
Sbjct: 344 NVRNPGGNIDLTTIQIN 360


>gi|241767683|ref|ZP_04765315.1| protein of unknown function DUF748 [Acidovorax delafieldii 2AN]
 gi|241361363|gb|EER57882.1| protein of unknown function DUF748 [Acidovorax delafieldii 2AN]
          Length = 344

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 79/248 (31%), Gaps = 17/248 (6%)

Query: 29  WTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSM 88
               +   ER A+  +G+ + V G I         +  +DI +        + +I  +  
Sbjct: 41  PALAKGPLERMASEALGRPVTV-GAIDFKPW-TLEITLRDIAVGGTAGAPPQLEIARIYA 98

Query: 89  RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILE 140
            AE   LL     V  + ID PHL     + G  +                     + L 
Sbjct: 99  DAEMQSLLRLAPVVDALEIDAPHLRLTHLADGHYDVDDILARLSTPSGKPDTGPARLALY 158

Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200
            + + GG +   D+  D+ + +  L L++                +  V    +    + 
Sbjct: 159 NLALTGGAVDFTDRTVDRTHAVRQLALKVP------FISTLPSQREVKVEPHLSFAIGDS 212

Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259
           R    +     A+       ++   L   P +  L  +L    K  I      VA + + 
Sbjct: 213 RFDSSVQGTPFAQTGKGDATVKWQGLDLAPYLAYLPASLPVRVKGAILDMDVKVAFEQAP 272

Query: 260 LLNLELSA 267
            L ++L+ 
Sbjct: 273 HLAVKLTG 280


>gi|283851605|ref|ZP_06368884.1| AsmA family protein [Desulfovibrio sp. FW1012B]
 gi|283572935|gb|EFC20916.1| AsmA family protein [Desulfovibrio sp. FW1012B]
          Length = 1296

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/335 (11%), Positives = 90/335 (26%), Gaps = 52/335 (15%)

Query: 21  FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--S 78
           F     I     +   E+  T  +G+++ V G + I   P+  +    + + ++      
Sbjct: 46  FAARQMIGPERLKTITEQALTDALGRRVTVSGDVSILFAPWFGLAMGPVAVAERPGAGDG 105

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI 138
                  L M    LPLL+  +    + +    L+    + G +NW    +         
Sbjct: 106 PMLTAGRLEMTIRVLPLLARVVSPGSVRVRDLGLHLRRDASGRTNWDDLTAPHSAAAASA 165

Query: 139 LE--------KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
            +         I ++   +   D  + +V  ++D  L+                +     
Sbjct: 166 PDWEVAPEPRDILIENASVDYRDAVTGRVLAVTDARLK--------------TGLGQPFD 211

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250
                            A     + ++    +      P    L  +    E      G 
Sbjct: 212 FS-----------LAFRAAGLLPDTSLECHARGKATFDPGSGRLAFSKTVVESALTILGP 260

Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS-Q 309
            +  G     L   L+A     +G   ++  +VR+                    + +  
Sbjct: 261 LAPGGATPARLVSRLTADYDPAAGTLSLAGLDVRLP-----------GGRITGSAEATGL 309

Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344
            +   +      A    DL+    + E    +   
Sbjct: 310 GQSPKVR-----AALALDLDMAGKWRELLGLSPAA 339


>gi|182412097|ref|YP_001817163.1| hypothetical protein Oter_0273 [Opitutus terrae PB90-1]
 gi|177839311|gb|ACB73563.1| protein of unknown function DUF748 [Opitutus terrae PB90-1]
          Length = 1098

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/336 (12%), Positives = 102/336 (30%), Gaps = 36/336 (10%)

Query: 12  LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71
           +  V++     +  F+     R + +++    +G+ +++ G +KI    F S+  + ++I
Sbjct: 11  ILLVLVGVYAVLGYFVLPPIARTELQKRMAAQLGRTVSI-GAVKIDPFAF-SIALERVQI 68

Query: 72  DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----- 126
                    +    LS+  + L  L GE  + ++ ++       +   G  ++       
Sbjct: 69  MNASGAEPFAGWRRLSVNFDPLASLRGEWVLGEITLEDFRGGVEIDEHGTPSFSDLLDRF 128

Query: 127 ----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLNLQISAR 172
                                 + ++ V G ++  +D+   +V+       +  L     
Sbjct: 129 GKTREPDAARPAEPRQRSRPWRISRLTVAGAQVDFVDRSRSEVFRTLLGPVNFTLVEFRT 188

Query: 173 FLNIISPLSIDSIKGS---VIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKIQLFPLAY 228
                +P   ++   S   +   G+ +     S  +        +K    L  Q+  L  
Sbjct: 189 AGGHGAPYRFEARSESGEKLTWTGSLSARPLTSTGEWRLENVLLSKYAPYLDEQMNLLLT 248

Query: 229 PIIIDLFG-----NLFWNEKQPIYSGVFSVAGDFS---KLLNLELSAKKSRLSGNFKISD 280
              + L G      L  + +  +  G   +              L    + L G F +  
Sbjct: 249 AGKLTLSGRYDVSFLPDDRRLQVTEGAAQLTNLKLVERATGQPLLELPTAELRG-FSVDG 307

Query: 281 --GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314
               V +   +L         D D    ++      
Sbjct: 308 LQRRVALGTLRLSGGRLAVRRDADGALNLASVLAPR 343



 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/240 (11%), Positives = 69/240 (28%), Gaps = 32/240 (13%)

Query: 47  KIAVKGGIKIHILP---FPSVF-----FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG 98
           K+ + G   +  LP      V        ++++ ++  G    ++    +R   +  L  
Sbjct: 251 KLTLSGRYDVSFLPDDRRLQVTEGAAQLTNLKLVERATGQPLLELPTAELRGFSVDGLQR 310

Query: 99  EIRVFDMYIDQPHLNFYLSSKGVSNWF--------------QRKSTMDMIHNVILEKIHV 144
            + +  + +    L     + G  N                  +   D    V   +  V
Sbjct: 311 RVALGTLRLSGGRLAVRRDADGALNLASVLAPRSAGSSAGDATEPAHDQPIEVTATEFGV 370

Query: 145 KGGRIKIIDQESDQV--YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202
           +   ++  D  + +     L+ +N  +        + L +++  G +  +GT       +
Sbjct: 371 RDFVVQWHDGTTPRPVDIELTGVNATVKDVTSTRGATLPVEATFG-LNPQGTARASGNVA 429

Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIII-------DLFGNLFWNEKQPIYSGVFSVAG 255
                 N   +   + L      +   + +        L G +            F+  G
Sbjct: 430 LAPFRLNLDLELAWMPLPPFSGYMERALPVRLARGTASLKGRVAVAPGPAGPDVSFTGGG 489


>gi|171463804|ref|YP_001797917.1| AsmA family protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193342|gb|ACB44303.1| AsmA family protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 265

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 80/247 (32%), Gaps = 20/247 (8%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKI 83
           F++ +   +        I G+++ + G + ++  P  SV  + + +             +
Sbjct: 17  FVNTSQLTKLLSSSVQEITGRELKITGPVSLNFFPSISVKTEQVSLSNVPWASNPEMLTV 76

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------------FQR 127
           + L +     PLL G++ +  + +     N   +  GV NW                   
Sbjct: 77  KQLELDISIWPLLKGDVEISRIALVGVDANLQTNKAGVGNWNLTPPVLNQNISSGQSVAT 136

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187
             +      V L+ + V   +I   D        L    L + +    ++  +     K 
Sbjct: 137 PDSASDSSFVTLKTLDVIDAQINYQDDNQAPKIILIP-KLSLGSSEGRVMILMDAQYAKH 195

Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
           S+  +G  +   + + F    +    +  + L +    LA    ID    +       + 
Sbjct: 196 SLNLKGKTS-SLRNAYFAWNQSPLKMDLDLVLTLNGKSLAITGDIDKTPQVLPQFNVSLI 254

Query: 248 SGVFSVA 254
           S  F +A
Sbjct: 255 SKSFDLA 261


>gi|257095597|ref|YP_003169238.1| hypothetical protein CAP2UW1_4067 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257048121|gb|ACV37309.1| conserved hypothetical protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 1307

 Score = 91.1 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 87/285 (30%), Gaps = 22/285 (7%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFK 67
            GF+  V+ +    +P   +   +R + ERQ ++ +G  + + G I+       P +   
Sbjct: 42  FGFVLLVLALRYLVLP---NIESYRPEIERQLSVGLGLSVVI-GKIEASWAGLNPDLILS 97

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127
           D+RI   +          +     +  +   ++R+  + I +P L+      G       
Sbjct: 98  DVRIADAQG-QPALAFTRVEGVLSWSSIPHWQLRLGLLQIAEPTLHLRRDVDGRFYVAGI 156

Query: 128 KSTMDMI------HNVILEKIHVKGGRIKIIDQES-DQVYFLSDLNLQISARFLNIISPL 180
             + D          +   +I V+G  +   D +       L D++  +          L
Sbjct: 157 AVSQDGGDGSVADWILAQRRIRVEGATVVWEDAKREAPPLILEDVDFALDNNGRQHRFGL 216

Query: 181 SI---DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII-DLFG 236
           +          +   G     +   A         +     L +    L YP+ +    G
Sbjct: 217 TAMPPAEFASRIDLRGDFRGRSIEQAQSWQGQAFVQIDYADLAVWRAWLDYPLALPHGRG 276

Query: 237 NLFWNEKQP-----IYSGVFSVAGDFSKLLNLELSAKKSRLSGNF 276
            +              +  FS+     +L          R+SG  
Sbjct: 277 AVRAWAGFADGGLRDLTADFSLHDVNLRLAKDLPELDLERMSGRL 321


>gi|255691111|ref|ZP_05414786.1| outer membrane assembly protein [Bacteroides finegoldii DSM 17565]
 gi|260623464|gb|EEX46335.1| outer membrane assembly protein [Bacteroides finegoldii DSM 17565]
          Length = 841

 Score = 91.1 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/386 (10%), Positives = 100/386 (25%), Gaps = 57/386 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQAT----LIVGKKIAVKGGIKIH 57
           +++ L        V+++    +P       F+             ++  +   +  + I 
Sbjct: 1   MKKGLKIAAITVGVIIILMLLLPF-----AFKGKIADIVKTEGNKMLNAQFDFE-RLNIS 54

Query: 58  IL---PFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPH 111
           +    P  SV  +D  +    +       +   ++       L       +  ++I+   
Sbjct: 55  LFRNFPQASVTLEDFWLKGAGEFANDTLVQAGEVTAAINLFSLFGDSGYDISKIFIEDTR 114

Query: 112 LNFYLSSKGVSNWFQRKSTM------------DMIHNVILEKIHVKGGRIKIIDQESDQV 159
           L+  +   G  NW   K                    V L++  +K   +   DQ+    
Sbjct: 115 LHAIVLPDGQVNWDIMKPDTTATEETPTAEEESSPFKVKLQQFVIKNMNLVYDDQQGKMY 174

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
             + D N   S    +  + L +++   S+  +  G      +      +  A       
Sbjct: 175 ADIRDFNAVCSGDLGSDRTTLQLEAETQSLTYKMNGIPFLADANISAKMDIDADLANNKY 234

Query: 220 KIQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278
            ++   +    I   + G +   +         +      K +   + A           
Sbjct: 235 TLKDNTIRLNAIQAGIDGWVALQDPAIDMDLKLNTNDIGFKEILSLIPA----------- 283

Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE 338
               +  + +        ++     K  +  D     N       +M             
Sbjct: 284 ----IYATEFSSLKTDGTATLTAAAKGVLQGDTVPAFNIDMQIKNAMF------------ 327

Query: 339 KKNKNDDLKKDDIQYSVNKKEEKDNS 364
            +        D I  S N +    N 
Sbjct: 328 -RYPALPAGVDQINISANVQNPGGNI 352


>gi|29349537|ref|NP_813040.1| outer membrane assembly protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29341446|gb|AAO79234.1| outer membrane assembly protein [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 838

 Score = 91.1 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/377 (9%), Positives = 102/377 (27%), Gaps = 36/377 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-- 59
           +++ L     +  V+++    +P            + +   ++  +   K  + I +   
Sbjct: 1   MKKGLKIAAIVVGVIIILMLLLPFAFQ-GKIAGIVKTEGNKMLNAQFDFK-KLNISLFRN 58

Query: 60  -PFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFY 115
            P  SV  +D  +    +       +   ++       L       +  ++I+   L+  
Sbjct: 59  FPQASVTLEDFWLKGAGEFANDTLVQAGEVTATINLFSLFGDSGYDISKVFIEDTRLHAI 118

Query: 116 LSSKGVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
           +   G +NW                        V L++  +K   +   DQ+      + 
Sbjct: 119 VLPDGRANWDIMKPDTTDTQETPAAEEDSSPFKVKLQRFVIKNMNLIYDDQQGKMYADIR 178

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
           D N   +    +  + L +++   S+  +  G      +      +  A        ++ 
Sbjct: 179 DFNALCAGDLGSDRTTLKLEAETKSLTYKMNGIPFLANANISAKMDVDADLANNKYTLKD 238

Query: 224 FPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
             +    I   + G +   +         +      K +   + A               
Sbjct: 239 NTIRLNAIQAGIDGWVELKDPAIDMDLKLNTNDVGFKEILSLIPA--------------- 283

Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342
           +  + +        ++     K  +  D     N       +M          ++   N 
Sbjct: 284 IYATEFSSLKTDGTATLAASAKGTLQGDTVPAFNIDMQVKNAMFRYPALPAGVDQININA 343

Query: 343 NDDLKKDDIQYSVNKKE 359
           N      +I  +  +  
Sbjct: 344 NVRNPGGNIDLTTIQIN 360


>gi|56475951|ref|YP_157540.1| hypothetical protein ebA972 [Aromatoleum aromaticum EbN1]
 gi|56311994|emb|CAI06639.1| probable transmembrane protein [Aromatoleum aromaticum EbN1]
          Length = 1294

 Score = 91.1 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 85/312 (27%), Gaps = 19/312 (6%)

Query: 3   RRVLIGLGFLFSVVLVGAFTV--PLFIDWTDFREDFERQATLIVGKKIAVKG-GIKIHIL 59
           R V IGL   F V  +    V   L      +R          VG  +++      +   
Sbjct: 25  RPVAIGLAVAFFVAALSFLLVRDVLLPRADQYRGHLAALIGDAVGLPVSIDALSADVS-G 83

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             P +    + +  +E      +++ +     +  LL G+     + +  P L     + 
Sbjct: 84  LRPRLHLSGVELRDREG-RPALRLDTVDATLAWWSLLRGQPHFHRLVLHAPQLALRRDAG 142

Query: 120 GVSNWFQRKSTMDMI------HNVILEKIHVKGGRIKIID-QESDQVYFLSDLNLQISAR 172
           G                          +I ++   +   D + +     L  +N +++  
Sbjct: 143 GQLFVAGIPVASGGPSGGLSDWLFGQREIVIRDAAVSWHDARRAAPELRLEQVNFRLAHA 202

Query: 173 FLNIIS---PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
                         ++  ++   G             +           L      + YP
Sbjct: 203 GGRYRFGLQAAPPAALASTLDLRGDITSAQPAEPGTWSGELYLALAQADLGGWRAWIDYP 262

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
           I +   G +    +          A   +  +   L+A         +++    R+S  +
Sbjct: 263 IELAGNGGMRAWLELTHGQPEAFTANFAADEIATRLAADLP----ELQLASARGRLSGRR 318

Query: 290 LQSILPNSSTDE 301
             + L  S+   
Sbjct: 319 SPAGLSLSARAL 330


>gi|170751383|ref|YP_001757643.1| AsmA family protein [Methylobacterium radiotolerans JCM 2831]
 gi|170657905|gb|ACB26960.1| AsmA family protein [Methylobacterium radiotolerans JCM 2831]
          Length = 610

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 96/334 (28%), Gaps = 33/334 (9%)

Query: 12  LFSVVLVGAFTVPL-FIDW---TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67
           +F + L       L   DW         F R+A    G  + ++G  ++ +LP+P + F 
Sbjct: 7   IFVLALGSLIAAGLGLRDWPVEDGRVTAFARRAFDAYGLGLTLEGPARLAVLPWPRLTFD 66

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127
            +R+     G   ++   L++  + L LL G   V  + ++           G      R
Sbjct: 67  RVRLAAGSAGPVLAEEGRLTIDLDPLSLLGGRAAVSGLRLEGA--RLSDDPAGWDAALAR 124

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187
            +               +  RI + D          D++L I+       +         
Sbjct: 125 LAEQARSGE------TARPRRIVLRDARLAAGDAARDIDLDIAWPLWGRAA--------- 169

Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP-IIIDLFGNLFWNE---K 243
                 +  +    +   +T   PA             + +P   +   G +        
Sbjct: 170 --EGRASLIWRGVPTRIALTHLRPAALAQRRGSPFTAEITWPNGSLAADGTVAPPAEGGA 227

Query: 244 QPIYSGVFSVAGDFSKL------LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297
            P+ SG                  ++ L+      S + +       +S   L+  L  +
Sbjct: 228 LPVMSGQVRFETRSLPESLAWIGRDVPLAPLAGAFSVDGRFETAERSVSWPSLRIGLGQN 287

Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331
             +      +   +   L+     A    DL   
Sbjct: 288 VLEGAGAVALGPGKAPRLSVQATLAAETLDLTPL 321


>gi|145300962|ref|YP_001143803.1| hypothetical protein ASA_4114 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142853734|gb|ABO92055.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 689

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/374 (10%), Positives = 113/374 (30%), Gaps = 34/374 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR +L    FL   V V         D    R       +   G  + + G +  + L  
Sbjct: 5   LRALLYTFAFLLLFVWVALG----LFDAERARGPIASWISQQTGVPVTI-GRLVFNPLHP 59

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            ++  + +             ++ L +  E +  L+ ++R+  + + +P +   L     
Sbjct: 60  YTLLAEQVSYGDA------ITLDKLYLEIESIDWLNRDVRIAHLDLIRPVIKLPLP---- 109

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           +           I +  ++++ +    + +    S     L+D  L    R       L+
Sbjct: 110 NTLPTLPVHSLTISDSTIDRLSLHSDELTL----SGLNATLNDWQLLNPVRPPQANLSLN 165

Query: 182 IDSIKGSV----IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII-DLFG 236
           I+ ++            G  + +  +          +  +   + L   A  + + +L  
Sbjct: 166 INELETPAFALSRLNLKGRLEGQVLSTD-KLTANLFDGLLETGMTLDWPARSLRLHNLKA 224

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
                E   +      +         +      + ++    +++ N +++ +  Q+    
Sbjct: 225 QGMRVEWGAMGQPELPLRHISLDTGQVR-DVSITAITQEISLNNFNGQLTAFSWQAGSTP 283

Query: 297 SSTDEDNKTKVSQD----EENLLNFSENGAESMHDLN----ETDFFEEEEKKNKNDDLKK 348
           +     +   + +     E+     S +  +   ++     E +F  +     +   L  
Sbjct: 284 TGYFTGSLGDLGRGLFQLEDLKGRVSFSPQQIDAEVQGKAYEGEFNLDLALDTQQQKLTL 343

Query: 349 DDIQYSVNKKEEKD 362
            D+  S       +
Sbjct: 344 KDMTLSGMDISLPE 357


>gi|319953648|ref|YP_004164915.1| outer membrane protein [Cellulophaga algicola DSM 14237]
 gi|319422308|gb|ADV49417.1| putative outer membrane protein [Cellulophaga algicola DSM 14237]
          Length = 908

 Score = 90.7 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/332 (12%), Positives = 92/332 (27%), Gaps = 39/332 (11%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK----- 55
           M +++L  +G +  + ++     P F      +          V   I      +     
Sbjct: 1   MKKKILKIVGIILLLFVITLIAAPFF-----LKGKIADIIKNKVNNSITATFDFEDADLT 55

Query: 56  -IHILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE---IRVFDMYIDQ 109
                P   +    I +  K    G        +++      L  G    I +  + ID 
Sbjct: 56  LFSSFPNAKLTMNAISLVNKAPFVGDTLFSSNEVALEMSIKELFKGADEPIAISSLTIDN 115

Query: 110 PHLNFYLSSKGVSNW---------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
             +N   +  G +N+            ++       + ++   +   RIK +D+ +   +
Sbjct: 116 ALINIIANEDGAANYDIAVPSTETAAEETDASSNFTLSMKSYAITNTRIKYLDKATGMRF 175

Query: 161 FLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
            L D+N   +       S L   +    S   + T   +                   S 
Sbjct: 176 ELIDMNHSGTGDLSLEKSELDTKTSGLVSFEMDSTNYLNKNPIKLDALIGVDLATSTYSF 235

Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS------------A 267
            ++   +   + +   G +  N+        F       K     +              
Sbjct: 236 -LKNEAMVNQLPLVFDGFIKLNDDSQEIDISFKTPSSDFKNFLAVIPEEYSKNIENVTTT 294

Query: 268 KKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
               ++G F     +  I ++K+     N+S 
Sbjct: 295 GNFSIAGRFNGIVDDTHIPKFKIDINSDNASF 326


>gi|124265783|ref|YP_001019787.1| outer membrane biogenesis protein [Methylibium petroleiphilum PM1]
 gi|124258558|gb|ABM93552.1| uncharacterized protein involved in outer membrane biogenesis
           [Methylibium petroleiphilum PM1]
          Length = 826

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/324 (10%), Positives = 84/324 (25%), Gaps = 38/324 (11%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGL 86
            D   ++            + +A+ G I + + P   V  +D+++ +       + ++  
Sbjct: 30  FDPNRYKGLLIDWMREHKARTLAIDGPIGLSVFPRLEVTLRDVKLSEHRRPDEFAALQEA 89

Query: 87  SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW------------FQRKSTMDMI 134
           ++  + +PLL   + V  +      +N+   + G  N                 +     
Sbjct: 90  TLAVQVMPLLKQRLAVDRVSARGVRVNYRRDADGRRNIDDLLSPATDAKDAPAANASSQA 149

Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
               +  I  K  +  + D             L+         SP+           +  
Sbjct: 150 LAFDISAIEFKDLQATVKDVPLGLDGRFVVKELRTGRLADGAESPIRFVGQAALAQPKLN 209

Query: 195 GNFDNK-RSAFKITANFPAKNKAISLKIQLFPLAY---PIIIDLFGNLFWNEKQPIYSGV 250
            + +   +    + A  PA      L + L    +    +   L G L ++         
Sbjct: 210 ADVELTGQLKLSLPAGAPASVALRDLALSLRGDGFDVKQLDARLAGTLAYDGPSGALQAD 269

Query: 251 ---------------------FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
                                            L L A   +L+G         +++  K
Sbjct: 270 KLRLTLSGERLGVALKDSTVALDALRLDPPKRALRLDALDVKLTGQRGEDSVAAQLAWPK 329

Query: 290 LQS-ILPNSSTDEDNKTKVSQDEE 312
           L+      + +       +     
Sbjct: 330 LEVTGDTLNGSALKGSASLQGGPA 353


>gi|311745060|ref|ZP_07718845.1| putative membrane spanning protein, required for outer membrane
           integrity [Algoriphagus sp. PR1]
 gi|126577572|gb|EAZ81792.1| putative membrane spanning protein, required for outer membrane
           integrity [Algoriphagus sp. PR1]
          Length = 1001

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 48/384 (12%), Positives = 120/384 (31%), Gaps = 33/384 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGG-IKIHI-- 58
           +++ LI    +F V++  A   P+           +++    V  K+      + + I  
Sbjct: 1   MKKFLIITAGVFIVLIGAAIAFPILF-KDKIAARIDQEIAQSVNAKVLYDLDNVSLSIFR 59

Query: 59  -LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNF 114
             P  S   ++  I             ++ L +      +L  +   +  ++++  +L  
Sbjct: 60  SFPNISANIQEFGIVGNAPFETDTLVTLDELQIDFNLKSVLFDDYPTLTGVHLNGGNLYI 119

Query: 115 YLSSKGVSNWFQRKSTMDMIH-------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
            +   G +N+     + D           + +++I +    +   D++ D    L ++N 
Sbjct: 120 KVLQDGTANYDIMYPSTDTTAVAEESNMRIGIDQIEINHLNLVYDDRQLDYFMALGEINA 179

Query: 168 QISARFLNI--ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
           Q +  F +     P+ ++++   V  EGT    NK  + +       +    +L      
Sbjct: 180 QGNGEFTSDVYELPIELEALIAEVNYEGTSYLSNKNFSGETALTVDMEQMKFTL------ 233

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                     GN   N+     +G  S+  +    L+L    K +       +  G +  
Sbjct: 234 --------GEGNFQLNDFIFGLTGFLSMPDEDIN-LDLAFEGKDNEFKSILSLVPG-IYS 283

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
             +             + K   ++ +    + S   A+ M    +     +    +    
Sbjct: 284 DSFSSLETSGTMDFQGNVKGVYNEQKFPSFDVSLKIADGMFKYQDLPKPVKNVNLDMQVL 343

Query: 346 LKKDDIQYSVNKKEEKDNSHDKEN 369
            + D I  +       +       
Sbjct: 344 NETDQIDNTSISIPNFNLDFGSNP 367


>gi|121602232|ref|YP_988620.1| AsmA family protein [Bartonella bacilliformis KC583]
 gi|120614409|gb|ABM45010.1| AsmA family [Bartonella bacilliformis KC583]
          Length = 626

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 83/271 (30%), Gaps = 43/271 (15%)

Query: 1   MLRRVLIGLGFLFSVVL----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           M  +++  L  +F  V+         +P  +     R    +  +   G  + ++   ++
Sbjct: 1   MRAKIVKFLSGIFFAVVFLFGAAVIILPYIVSTDAIRIRLAQDLSAWTGYNVQLRDPPRL 60

Query: 57  HILPFPSVFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
            + P+P  F   + + QK +D +   + E + +    + LL   +   +  I +P     
Sbjct: 61  DLFPYPKAFLSGVTLTQKIDDNAPLMEAESIEVDLSLIDLLWKRVSFSETRIIRPQFVIE 120

Query: 116 LSSKGVSNWFQRKSTMDMIHNVIL------------------------EKIHVKGGRIKI 151
              K ++++F   S       + +                         ++ +K G +  
Sbjct: 121 KPVKTIADFFDTLSQSQGALGLTIRSAREVVMHNPDQPDVEHLLRQPFGRVVIKNGVLVY 180

Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP 211
            D  SD    ++ LN  +        +                 ++  + +   I A+  
Sbjct: 181 RDSVSDVAEKITGLNATMDWPESTRAA-----------RFRANAHWRGELTELIINADQA 229

Query: 212 ---AKNKAISLKIQLFPLAYPIIIDLFGNLF 239
                     LKI +  L   I       L 
Sbjct: 230 LLLLAGGKSPLKISMNSLRGGITFVGQAQLS 260


>gi|237815995|ref|ZP_04594992.1| AsmA family protein [Brucella abortus str. 2308 A]
 gi|237789293|gb|EEP63504.1| AsmA family protein [Brucella abortus str. 2308 A]
          Length = 646

 Score = 89.9 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 35/338 (10%), Positives = 95/338 (28%), Gaps = 37/338 (10%)

Query: 1   MLRR-VLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGI 54
           M+R  +   L   F ++   A       VP  +     R    ++ +   G  + ++   
Sbjct: 1   MMRWPIFTRLIIAFVILCAAAAATLLAVVPFIVSTDAIRIRVAQEISAWTGYSVELRQAP 60

Query: 55  KIHILPFPSVFFKDIRID--QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112
           ++ + P        + +     +        + + +    L  + G I   +  I +PH+
Sbjct: 61  RLSVFPVLRASLSGVTLSKLTDQGQKPLMSADRIDVELSPLDAIMGHISFSETQIVRPHV 120

Query: 113 NFY-------------LSSKGVSNWFQRKSTMDMIHNVILEKIHVKG-----GRIKIIDQ 154
           N                +S G      R     +        +         GR+ + D 
Sbjct: 121 NLEAPVSNISQLLDAIANSNGRLGTAIRAQRALLQSGAKKNALAAGQASQPFGRVVVRDG 180

Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK- 213
                   S+ N+    +  ++ + L       +   +G+  +  + + F +T       
Sbjct: 181 TIAFNRAGSEPNVPHDKQITDVNATLEWPRTSSAATLKGSAKWRGEATQFSLTVAQALPL 240

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
               +  +     A P+ +   G    +  +  + G  +            L+       
Sbjct: 241 LAGGTSDLTASLTANPLSLTFQGKANISRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGS 299

Query: 271 ------RLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
                  L+     +   ++ +  ++ +         +
Sbjct: 300 SEIGAFSLASTITATPKRLKFADVEMTANGSPVKGVIE 337


>gi|53712279|ref|YP_098271.1| outer membrane assembly protein [Bacteroides fragilis YCH46]
 gi|52215144|dbj|BAD47737.1| outer membrane assembly protein [Bacteroides fragilis YCH46]
          Length = 837

 Score = 89.9 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/347 (10%), Positives = 96/347 (27%), Gaps = 43/347 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQAT----LIVGKKIAVKGGIKIH 57
           +++       +  V+L+  F +P       FR   E         ++         + I 
Sbjct: 1   MKKGFKITAIVIGVILILMFLLPF-----AFRGKIEGIVKSEGNKMLNGHFDFS-SLDIS 54

Query: 58  I---LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPH 111
           +    P  SV   D  +            K   ++       L   +   V  + ++   
Sbjct: 55  LFRNFPKASVTLNDFWLKGTGKFENDTLVKAGEVTAAINLFSLFGDDGYDVSKVSVENTR 114

Query: 112 LNFYLSSKGVSNWFQRKSTMDMIH-----------NVILEKIHVKGGRIKIIDQESDQVY 160
           L+  +   G +NW   K                   + L++  +K   +   D++S    
Sbjct: 115 LHAIVLPDGKTNWDIMKPDSSTASETQESGESSTFRIKLQRFVIKNMNVVYDDRQSAMYA 174

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            + + N   S    +  + LS+++   ++  +  G     ++      +  A        
Sbjct: 175 DIHNFNALCSGDLGSDQTLLSLEAETEALTYKMNGIPFLSQANVYAKMDVDADLAHNKFT 234

Query: 221 IQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
           ++        I   + G +   +         + +    K +   + A            
Sbjct: 235 LKKNEFRLNAIKAGIDGWIELKDPAIDMDLKLNTSEIGFKEILSLIPA------------ 282

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
              +    +K       ++ +   K  +  D     +       +M 
Sbjct: 283 ---IYSKEFKNLKTDGTATLEATAKGILQGDTIPQFDVRLAVKNAMF 326


>gi|120434613|ref|YP_860303.1| hypothetical protein GFO_0244 [Gramella forsetii KT0803]
 gi|117576763|emb|CAL65232.1| conserved hypothetical protein [Gramella forsetii KT0803]
          Length = 902

 Score = 89.9 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 49/381 (12%), Positives = 124/381 (32%), Gaps = 36/381 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-- 59
           +++ L  LGF+   +++     P   + +  ++  ++     +  ++  K  I + +   
Sbjct: 1   MKKALKILGFVILTIIILLIVAPFIFE-SQLKDLVKKTMNDNLNAQVDFK-DIDLSMFRS 58

Query: 60  -PFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSG---EIRVFDMYIDQPHLN 113
            P  ++  +D+ I   E   G   +  E +++      L        ++  + +++ ++N
Sbjct: 59  FPEATLVIEDLSIINNEPFKGDTLALGEEVTLEMSIKELFKSSEEPKKIDRLTLNKAYVN 118

Query: 114 FYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             + S G +N+            ++     ++ L+   +   R+K  D+ S     + +L
Sbjct: 119 IKVDSLGNANYDIAVEDTTTVSSNSESTPFSLDLKHYEINNSRVKYDDKSSKTSLDIENL 178

Query: 166 NLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
           N + +  F    S L   S    S+  +G    +              +N   +  ++  
Sbjct: 179 NHEGTGDFSLDQSELDTYSEALVSLNYDGVNYLNQNSLILDAVIQMDLENMKYTF-LENE 237

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS------AKKSRLSGNFKI 278
                + +   G +  NE        F       K     +        +    +G+F +
Sbjct: 238 AKVNQLPLTFDGYVQVNENDTEMDVSFKTPSSDFKNFLAVIPEIYAKNIENVDTNGDFVL 297

Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD---LNETDFFE 335
           +       +     I         +       +        +  +   D   LN+T   E
Sbjct: 298 NGR--IFGKTDDTFIPKMDIKITSSNASFKYPDLPK-----SVQDINLDMEILNDTGLAE 350

Query: 336 EEEKKNKNDDLKKDDIQYSVN 356
           E      N   + D  +++ N
Sbjct: 351 ETYININNATFRIDQDRFTAN 371


>gi|91200055|emb|CAJ73097.1| hypothetical protein kuste2352 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 868

 Score = 89.9 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 44/376 (11%), Positives = 118/376 (31%), Gaps = 52/376 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R+++I L  +F  +L+     P  ID   +++     A   + ++      +K+ ++  
Sbjct: 1   MRKIIIILSSVFVFLLIAVIAAPFVIDLNKYKDRIITLAKPYLNREFDFA-DVKLTLISG 59

Query: 62  PSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V    +RI             ++ L ++    PLL  +I++  + +D+P +    +S 
Sbjct: 60  LGVEINGLRIADNPEFGSEDFLSLQSLRIKVALFPLLKKKIQIKKLIMDEPVVRLVRNSN 119

Query: 120 GVSNWF-----------------------------QRKSTMDMIHNVILEKIHVKGGRIK 150
           GV N+                                      +  +++ +  +  G+I 
Sbjct: 120 GVFNFSDMASDAEEDEKPQAKDEKRKEKKSGSEKKPDSEHNIFLAGLMVSQFTLHSGQIH 179

Query: 151 IID---QESDQVYFLSDLNLQISARFLNIISPLSIDS-----IKGSVIAEG-------TG 195
            +D    ++        LN+++    L     +   +      + +++ +G         
Sbjct: 180 FLDNFVPDAPVTMVFDSLNIELKNVSLYKPIRIYASAGLQGTTEQNLLIKGMVGPVGDNM 239

Query: 196 NFDNKRSAFKITANFPAKNKAISL---KIQLFPLAYPIIIDLFGNLFWNEKQPIYS-GVF 251
           +         ++      +K +      + L PL   + +        +    + S    
Sbjct: 240 DLVGLAMDIHVSVQNVFLHKFVPYIPDGLMLSPLEGILYMTANIKGSVHSGLDLESVIQG 299

Query: 252 SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE 311
                  K  + ++      L    K  D    I   +L   L +++       + +   
Sbjct: 300 EKLVMSIKDSDEKIQNVNITLKEKIKYDDRKGDIGFQQLDLALNDNNVSLTGTIE-NIKT 358

Query: 312 ENLLNFSENGAESMHD 327
           +   + +     +  D
Sbjct: 359 DPQWDVTLMAKMNALD 374


>gi|224826295|ref|ZP_03699397.1| AsmA family protein [Lutiella nitroferrum 2002]
 gi|224601396|gb|EEG07577.1| AsmA family protein [Lutiella nitroferrum 2002]
          Length = 717

 Score = 89.9 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 95/306 (31%), Gaps = 16/306 (5%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81
            +    D    RE   R       + + V+G IK H+LPFP +    I I Q  + +   
Sbjct: 30  LILWKFDEHAVRETLGRVLQEQ-HRNVTVRGAIKPHVLPFPGLDIDRIDISQPGNATPAI 88

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR-KSTMDMIHNVILE 140
            ++ L  R  +LPLL GE+ V  + +D   +          +     +        V L+
Sbjct: 89  TVDHLEARLAWLPLLFGELEVSKLRVDGLKVQVVRHPDSSLSIADLFQRRDTGRFRVKLD 148

Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200
            + ++   +  +D+ +     L+ L+L               D ++G             
Sbjct: 149 TLRLRESELDYLDESTQHHQTLNTLSL-------------DADGLRGDAHLSVGALLSGG 195

Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL 260
           R   ++    P   +   + +          ++  G    N    +    F+      + 
Sbjct: 196 RRPLRLALETPLTIQDDQVTLSQLQAVVMSEVEGLGESKLNANG-LLRLNFAALQATGEQ 254

Query: 261 LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320
           L L LS+   +     ++   +             +           +    + +   E 
Sbjct: 255 LALTLSSDNPKSGFTLRVPAFSASFKEITTPLATLDGQLTYGQTHYEAVARFDNVKLDEA 314

Query: 321 GAESMH 326
           G  + H
Sbjct: 315 GLNADH 320


>gi|160886925|ref|ZP_02067928.1| hypothetical protein BACOVA_04939 [Bacteroides ovatus ATCC 8483]
 gi|156107336|gb|EDO09081.1| hypothetical protein BACOVA_04939 [Bacteroides ovatus ATCC 8483]
          Length = 842

 Score = 89.9 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/348 (10%), Positives = 93/348 (26%), Gaps = 43/348 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------ 55
           +++ L        V+++  F +P       F+            K +  +   K      
Sbjct: 1   MKKGLKIAAITVGVIIILMFLLPF-----AFQGKIADIVKTEGNKMLNAQFDFKNLNISL 55

Query: 56  IHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112
               P  SV  +D  +    +       +   ++       L       +  ++I+   L
Sbjct: 56  FRNFPQASVTLEDFWLKGTGEFANDTLVQAGEVTAAVNLFSLFGDSGYDISKIFIEDTRL 115

Query: 113 NFYLSSKGVSNWFQRKST-------------MDMIHNVILEKIHVKGGRIKIIDQESDQV 159
           +  +   G +NW   K                     V L++  +K   +   DQ+    
Sbjct: 116 HAIVLPDGRANWDIMKPDTTATAEAPVSEEEASSPFKVKLQRFVIKNMNLIYDDQQGKMY 175

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
             + D N   +    +  + L +++   S+  +  G      +    T +  A       
Sbjct: 176 ADIRDFNAVCAGDLGSDRTTLKLEAETKSLTYKMNGIPFLANANISATMDVDADLANNKY 235

Query: 220 KIQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278
            ++   +    I   + G +   +         +      K +   + A           
Sbjct: 236 TLKDNTIRLNAIQAGIDGWVALKDPAIDMDLKLNTNDIGFKEILSLIPA----------- 284

Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
               +  + +        ++     K  +  D     N       +M 
Sbjct: 285 ----IYATEFSSLKTDGTATLTATAKGILQGDTVPAFNIDMQVKNAMF 328


>gi|298290613|ref|YP_003692552.1| AsmA family protein [Starkeya novella DSM 506]
 gi|296927124|gb|ADH87933.1| AsmA family protein [Starkeya novella DSM 506]
          Length = 614

 Score = 89.9 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 44/372 (11%), Positives = 111/372 (29%), Gaps = 33/372 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++++  L       L               R + E      +G++ A+ G +   + P+
Sbjct: 1   MKKLVPILLLPIVAALAAGVVASRLATQERLRHEVETMVQAAIGRQPAITGDVSFSVFPW 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P++    + ID         ++    +  + LPLL+G      + +    L         
Sbjct: 61  PAIEVDGLAIDDP---RARLEVGEARIVLDLLPLLTGRASPDYIELTDADLTLADPGDST 117

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                  + +          ++V  G +KI      +   +   +++I  R         
Sbjct: 118 KALGALITGLGTAE--SDADLYVTDGSVKIARGNGGE-MLIPQADMRIGWRGGRD----- 169

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL-KIQLFPLAYPIIIDLFGNLFW 240
                  V A+G   +  +     +  +  +   +  +  ++L     P  +   G    
Sbjct: 170 -------VTAKGRATWRGEPLDIDLNLSGLSALASGGIGSLKLAVSGTPAELSFQGGARL 222

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRISRYKLQS 292
               P+ +G  +VA    +     L              L+G+ ++S   V +   +++ 
Sbjct: 223 -AGGPVVTGTLAVASRQLRDALEWLDFDAPTERGFGAFALNGSAQLSAQGVVLGEARVEL 281

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
                         +  D    +    + A    DL+          +  + + +  D+ 
Sbjct: 282 ----DGNAGVGGFNLRFDGGRAI-VQGSLASEQLDLSPYGQLALSGGQGGSWNSEDIDLH 336

Query: 353 YSVNKKEEKDNS 364
            +     +   S
Sbjct: 337 RTRALDVDLRLS 348


>gi|239816072|ref|YP_002944982.1| hypothetical protein Vapar_3097 [Variovorax paradoxus S110]
 gi|239802649|gb|ACS19716.1| protein of unknown function DUF748 [Variovorax paradoxus S110]
          Length = 1275

 Score = 89.6 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 28/270 (10%), Positives = 76/270 (28%), Gaps = 23/270 (8%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED 76
           ++    VP        +   ++ A+  +G+++ V G I         +   D+RI   + 
Sbjct: 27  VIAWLAVPPI-----AKSQLQKIASEKLGRQVTV-GKIDFKPW-TLELALNDLRIATADG 79

Query: 77  GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF---------QR 127
              +  ++ +   AE   +L     +  + ++ P +     + G  +             
Sbjct: 80  SRPQVAVKRIYADAELQSILRLAPVIDAVTVEAPAILLTHQADGKYDIDDILAKLAAGPP 139

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187
                      +  I ++ G +   DQ   + + L    L +                  
Sbjct: 140 PDPKAEPARFAIYNISIRDGAVDFDDQTVKRRHELRGFVLNVP------FLSNLASKRDI 193

Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PIIIDLFGNLFWNEKQPI 246
           +   +     +  +          A ++     +Q   L   P +  + G L    +   
Sbjct: 194 NTEPKLAFALNGSKFDSAALTTPFAASRKTDAHVQFKGLDLAPYLGYIPGGLPVQLQAGS 253

Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNF 276
                 +  + +    L+++          
Sbjct: 254 LDADLKIDFEQAATAGLKITGTVEAHKAKL 283



 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 72/280 (25%), Gaps = 29/280 (10%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +V     ++            + L +    +  L     + ++ +  P L     +KG  
Sbjct: 275 TVEAHKAKLGDARGRD-LLGFDSLKLALADVRPLEAVFHLSEVALANPQLAVARDAKGQL 333

Query: 123 NWFQRKS-----------------------TMDMIHNVILEKIHVKGGRIKIIDQESDQV 159
           N                                    V ++K+ + GGRI   D+     
Sbjct: 334 NLLATDPATGAAEKVAKAPAAAASAPNGKAPEKPKLKVRVDKVALSGGRIGWRDETVQPA 393

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
             +    L +    L             + IA  T  F    +              +SL
Sbjct: 394 AAIETTALGLDLTELTWPMEKPARFSGSTAIAGATLKFQGSATDKVAEVQTEVDALPLSL 453

Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
                  +    +D   +             F         L L  +       G F++ 
Sbjct: 454 AAPYLAQSLEPTLDGKLSGQVEVAWAQPDLRFKARRVAVDGLALTQAKTALASVGRFELI 513

Query: 280 DGNVRISRYKLQSILPNSSTDEDN-KTKVSQDEENLLNFS 318
           D    ++++ L      +S    N K +V +D E    F 
Sbjct: 514 DAEADMTKHTLDV----ASFTATNPKVQVERDSEKRWMFE 549



 Score = 46.8 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/290 (8%), Positives = 69/290 (23%), Gaps = 50/290 (17%)

Query: 49  AVKGGIKIHIL-PFPSVFFKDIRIDQ---KEDGSFESKIEGLSMRAEFLPLLSGEIRVFD 104
            + G +++    P      + + +D     +  +  + +    +      +    + V  
Sbjct: 469 KLSGQVEVAWAQPDLRFKARRVAVDGLALTQAKTALASVGRFELIDAEADMTKHTLDVAS 528

Query: 105 MYIDQPHLNFYLSSKGVSNW-----------------------------FQRKSTMDMIH 135
                P +     S+    +                                        
Sbjct: 529 FTATNPKVQVERDSEKRWMFERWLKTPAGNGGTAQAKAAAPKPAGAGPEAAPPGANTKPW 588

Query: 136 NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT- 194
            + +  + V  G +   D+ S     +      I+A  L         +    +   G  
Sbjct: 589 ALTIGTLAVDNGTLSYADKASATPVAVE-----ITAFSLKAQKVAPETATVSPLQVSGRI 643

Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLF---PLAYPIIIDLFGNLFWNEKQPIYSGVF 251
           G+  ++   F    N   K  +   ++++      A+        N+        Y G  
Sbjct: 644 GSRRSEPGRFDYKGNVVLKPLSAEGRLEVASFPAHAFKAYYADALNVDIRRAFASYKGTV 703

Query: 252 SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
             A           +    +L+G+  + D                ++   
Sbjct: 704 RYASA--------PAGMTIKLAGDTALDDFRANSISLTQSPGFDRNTNQL 745


>gi|228471627|ref|ZP_04056401.1| AsmA family protein [Capnocytophaga gingivalis ATCC 33624]
 gi|228277046|gb|EEK15732.1| AsmA family protein [Capnocytophaga gingivalis ATCC 33624]
          Length = 896

 Score = 89.6 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 54/377 (14%), Positives = 116/377 (30%), Gaps = 27/377 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI--- 58
           +++     G +  V+++    +P        +E    +    V  +I+      + +   
Sbjct: 1   MKKFFKIFGIIVLVLILLLVCIPFLF-KNTIKEKIMEKVNESVNAQISFT-DFSLSVFKN 58

Query: 59  LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLL----SGEIRVFDMYIDQPHL 112
            P  +V  + +++       G   + +   S +     +L        ++    +    +
Sbjct: 59  FPNATVELEGLKVINNAPFAGDTLAYVGNFSAKVNLKDILFKGDKDPYKLLGFSLSNAVV 118

Query: 113 NFYLSSKGVSNWFQRKSTMDMIHN------VILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
           N +++ +G  N+   KST D          + L++  ++  R    D  S     L  L 
Sbjct: 119 NVHMNEEGKGNFDIAKSTSDTTDEEPNNFSLDLKEYSIENLRFTFRDDTSKMSVILDSLY 178

Query: 167 LQISARFLNIISPLS-IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
            +    F N +  L    + K S  ++GT    N               +  +LK     
Sbjct: 179 HKGKGNFANQVLDLETTTATKVSFASDGTAFLRNNVVTLDAVLGIDLNQQKYTLK-DNTL 237

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
               + ++  G +   E   +Y+  F      F   L+L  +A    + G     +  + 
Sbjct: 238 KLNALELNFDGFVQLLEDGQLYNLSFKTPKTTFKNFLDLIPAAYTKSIEGVQTTGEFTIN 297

Query: 285 I---SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL-NETDFFEEEEKK 340
                +Y   +I         N              S    +    + NET+  E+    
Sbjct: 298 GKVDGKYTPTTIPKLDIRMLSNNASFKYPSLPK---SVKNIDIDVKIGNETEKLEDTYVN 354

Query: 341 NKNDDLKKDDIQYSVNK 357
                   D   +SV  
Sbjct: 355 INRFAFTIDQDAFSVKA 371


>gi|298385033|ref|ZP_06994592.1| outer membrane assembly protein [Bacteroides sp. 1_1_14]
 gi|298262177|gb|EFI05042.1| outer membrane assembly protein [Bacteroides sp. 1_1_14]
          Length = 838

 Score = 89.6 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 38/377 (10%), Positives = 102/377 (27%), Gaps = 36/377 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-- 59
           +++ L     +  V+++    +P            + +   ++  +   K  + I +   
Sbjct: 1   MKKGLKIAAIVVGVIIILMLLLPFAFQ-GKIAGIVKTEGNKMLNAQFDFK-KLNISLFRN 58

Query: 60  -PFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFY 115
            P  SV  +D  +    +       +   ++       L       +  ++I+   L+  
Sbjct: 59  FPQASVTLEDFWLKGAGEFANDTLVQAGEVTATINLFSLFGDSGYDISKVFIEDTRLHAI 118

Query: 116 LSSKGVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
           +   G  NW                        V L++  +K   +   DQ+S     + 
Sbjct: 119 VLPDGHVNWDIMKPDTTDTQETPATEEESSPFKVKLQRFVIKNMNLIYDDQQSKMYADIR 178

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
           D N   +    +  + L +++   S+  +  G      +      +  A        ++ 
Sbjct: 179 DFNALCAGDLGSDRTTLKLEAETKSLTYKMNGIPFLANANISAKMDVDADLANNKYTLKD 238

Query: 224 FPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
             +    I   + G +   +         +      K +   + A               
Sbjct: 239 NTIRLNAIQAGIDGWVELKDPAIDMDLKLNTNDVGFKEILSLIPA--------------- 283

Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342
           +  + +        ++     K  +  D     N       +M          ++   N 
Sbjct: 284 IYATEFSSLKTDGTATLAASAKGTLQGDTVPAFNIDMQVKNAMFRYPALPAGVDQININA 343

Query: 343 NDDLKKDDIQYSVNKKE 359
           N      +I  +  +  
Sbjct: 344 NVRNPGGNIDLTSIQIN 360


>gi|254482278|ref|ZP_05095519.1| AsmA family protein [marine gamma proteobacterium HTCC2148]
 gi|214037603|gb|EEB78269.1| AsmA family protein [marine gamma proteobacterium HTCC2148]
          Length = 623

 Score = 89.6 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 47/381 (12%), Positives = 121/381 (31%), Gaps = 30/381 (7%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M R +L  +     +V+V A  +P+ +D     +    +     G +++V GG  + I P
Sbjct: 1   MPRILLYIILAPLILVIVAALLIPVMVDEEKMLQLAADEVRKQTGAELSVLGGADLRIFP 60

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +   D+ +D   D     +   L++  E +PLLS E+ +  + +D   +      + 
Sbjct: 61  TLGLALADVSLDMPSDQQPSLQARSLNIGVELIPLLSKEVAIETIELDGVVIKMTTEPEA 120

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQES-DQVYFLSDLNLQISARFLNIISP 179
                 + +   +       +  +   R     + +      L   +L I+   + +   
Sbjct: 121 APIDTSKLNDKQLGEFYAKRQADIDEARQAASTEAAVAVPLALEVASLSITDSRIEMTEV 180

Query: 180 LSIDSIKGSVIAEGTG-NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
               SI      + +G N + +    + +                     P+++   G++
Sbjct: 181 GGDTSIIEIDNLKVSGLNLEGRSIPLEGSVILAGDE--------------PLVVMFNGSV 226

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
             +++  +      +      L            SG   ++          L+ +     
Sbjct: 227 VVSQETQM----LGIEEMDLTLKGALAETVALNTSGEVDMNRQVA-----DLKLVATIGD 277

Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358
           T  D + + +  E   ++      +   +            +  +    +   + + +  
Sbjct: 278 TRADGQLRYAAFESPQID-----TQLRLNQFTPALLALAGPEAADTKPVQPSPEEAEDTP 332

Query: 359 EEKDNSHDKENQENFSGDKMI 379
              D     + + + S DK+I
Sbjct: 333 LPLDALRVIDTRADLSIDKVI 353


>gi|239909045|ref|YP_002955787.1| hypothetical protein DMR_44100 [Desulfovibrio magneticus RS-1]
 gi|239798912|dbj|BAH77901.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 1244

 Score = 89.2 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 80/266 (30%), Gaps = 21/266 (7%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKI 83
            I     RE  ++  T  +G+   + G + I + P+  +    + + Q            
Sbjct: 38  IIGPQRLREMAQKALTDALGRDTVLSGDVSITLTPWLGLSMGPVAVAQAPGFGDDPMFAA 97

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH------NV 137
             + M     PLL+  I    +      ++   ++ G +NW    +  D           
Sbjct: 98  RKVEMTIRMAPLLAKVISPGSVRARDVTVHLARAADGRTNWDDLAAPQDAQAGSGWTVVP 157

Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197
               +H+    ++  D  + +V  ++   L+     L      +       ++  G    
Sbjct: 158 QPRAVHLDNVAVRYDDAATGKVLSVTGARLRTG---LGQPFDFAASFEAMGLVPNGQLQC 214

Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL---FGNLFWNEKQPIYSGVFSVA 254
                   +         +  L +    +   ++ID     G              +  +
Sbjct: 215 -------HLQGRASFDPGSGRLGLHGVRVESGLVIDAPLVPGGAVPTRVVSRLILDYDAS 267

Query: 255 GDFSKLLNLELSAKKSRLSGNFKISD 280
                L +++  A   RL+G   +SD
Sbjct: 268 AAALTLSDIDARADGLRLTGTAGVSD 293


>gi|319898417|ref|YP_004158510.1| AsmA family [Bartonella clarridgeiae 73]
 gi|319402381|emb|CBI75920.1| AsmA family [Bartonella clarridgeiae 73]
          Length = 626

 Score = 89.2 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 59/417 (14%), Positives = 125/417 (29%), Gaps = 65/417 (15%)

Query: 1   MLRRVLIGLGFLFSVVL----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           M  +++  L  +F  ++          P  +     R    +  ++  G  + ++   ++
Sbjct: 1   MCIKIIKFLSGIFIAIVSLGGAAVIIFPYIVSTDAIRIRLAQDLSVWTGYNVQLRDPPRL 60

Query: 57  HILPFPSVFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
            I P+P  F   + +  K E  +   ++E + +    + LL G I   +  +  P     
Sbjct: 61  KIFPYPKAFLSGVTLTPKIESIAPLMEVESIEVDLSLVSLLGGHISFSETRVMYPKFVMD 120

Query: 116 LSSKGVSNWFQR-------------------KSTMDMIHNVIL-----EKIHVKGGRIKI 151
              K +S++F                     K   D      L      +I ++ G +  
Sbjct: 121 KPVKTISDFFDTLLRSQGALGLAIQSAREIIKHNPDNPDVASLLNQPFGRIVIENGTLIY 180

Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP 211
            D  SD +  ++ LN           + +    +  +V       +  + +   I A+  
Sbjct: 181 RDGISDVMEKITGLN-----------ASIDWPGLTQAVQFRAKARWHGELTELLINADQA 229

Query: 212 ---AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268
                    SLK+    +   I       L    +  I+ G  S+   F           
Sbjct: 230 LFLLAGGKSSLKVSFNSVRGGITFKGQAQLS---EYYIFDGKLSLR--FPGWDQTVAWIG 284

Query: 269 KSRLSGN-----------FKISDGNVRISRYKLQSILPNS----STDEDNKTKVSQDEE- 312
            ++  GN           F      +R++         N+      D  N   V      
Sbjct: 285 GNQFWGNGLKIPIVWESHFLAQPARIRMNNIIFTIGTANARGALEFDFKNHVPVLIGSLG 344

Query: 313 -NLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
            + L+F+   +       E +FF+         D++    Q  +      D +   +
Sbjct: 345 FDKLDFNILKSLFFCSEKENEFFDVAFLNRIGLDIRLSAPQAKIGDIGLTDLAAAIQ 401


>gi|92119068|ref|YP_578797.1| AsmA [Nitrobacter hamburgensis X14]
 gi|91801962|gb|ABE64337.1| AsmA [Nitrobacter hamburgensis X14]
          Length = 640

 Score = 89.2 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 91/297 (30%), Gaps = 28/297 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +  + I       ++ +    +   I         + +     G +IA+ G   I + P 
Sbjct: 1   MGALKIAGVAATCLIAIAIVLLVTGIPSGFVTSLVQDRIERETGYRIAINGKTGIGLWPS 60

Query: 62  PSVFFKDIRIDQKEDGSFES--KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            S+   ++ ++  +  + +    +  +     F  LLSG  +V D+ ID   L   L  +
Sbjct: 61  FSLALHNVTLENPKTTATDVHIAVGEVRAALPFASLLSGAPKVSDLTIDHATLRLPLLRE 120

Query: 120 G-VSNWFQRKSTMDMIH----NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
               +                   ++++ +  G I   D ++     + D+N  ++    
Sbjct: 121 RTRIDIPPGPDHSGDTSEDDTPFPIDRVTISNGTIVFFDPQTSSEGRVGDVNASVTLSTD 180

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                         +   G     N    F I A  PA        +    +   + +D+
Sbjct: 181 R------------QINVTGNARPGNHSLKFGIKATPPA------GPLGRQNIPTELTLDV 222

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
            G      ++        + G    +  L  S    + +G   +   +  + +  L 
Sbjct: 223 PG---LPTRELTAKAEVRINGRMLLINGLSGSLNDGKFNGWASVDLASKPLVKLDLD 276


>gi|254702324|ref|ZP_05164152.1| AsmA family protein [Brucella suis bv. 5 str. 513]
          Length = 645

 Score = 89.2 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/311 (9%), Positives = 87/311 (27%), Gaps = 31/311 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79
            VP  +     R    ++ +   G  + ++   ++ + P        + +     +    
Sbjct: 27  VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126
               + + +    L  + G I   +  I +PH+N                +S G      
Sbjct: 87  LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146

Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           R     +        +         GR+ + D         S+ N+    +  ++ + L 
Sbjct: 147 RAQRALLQSGANKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240
                 +   +G+  +  + + F +T           +  +     A P+ +   G    
Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291
           +  +  + G  +            L+              L+     +   ++ +  ++ 
Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325

Query: 292 SILPNSSTDED 302
           +    +    +
Sbjct: 326 ANGSPAKGVIE 336


>gi|306843024|ref|ZP_07475651.1| AsmA family protein [Brucella sp. BO2]
 gi|306286816|gb|EFM58357.1| AsmA family protein [Brucella sp. BO2]
          Length = 646

 Score = 89.2 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/338 (10%), Positives = 94/338 (27%), Gaps = 37/338 (10%)

Query: 1   MLRR-VLIGLGFLFSVVLVGAFTV-----PLFIDWTDFREDFERQATLIVGKKIAVKGGI 54
           M+R  +   L   F ++   A        P  +     R    ++ +   G  + ++   
Sbjct: 1   MMRWPIFTRLIIAFVILCAAAVATLLAVVPFIVSTDAIRIRVAQEISAWTGYSVELRQAP 60

Query: 55  KIHILPFPSVFFKDIRID--QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112
           ++ + P        + +     +        + + +    L  + G I   +  I +PH+
Sbjct: 61  RLSVFPVLRASLSGVTLSKLTDQGQKPLMSADRIDVELSPLDAIMGHISFSETQIVRPHV 120

Query: 113 NFY-------------LSSKGVSNWFQRKSTMDMIHNVILEKIHVKG-----GRIKIIDQ 154
           N                +S G      R     +  +     +         GR+ + D 
Sbjct: 121 NLEAPVSNISQLLDAIANSNGRLGTAIRAQRALLQSSAKKNALAAGQASQPFGRVVVRDG 180

Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK- 213
                   S+ N+    +  ++ + L       +   +G+  +  + + F +T       
Sbjct: 181 TIAFNRAGSEPNVPHDKQITDVNATLEWPRTSSAATLKGSAKWRGEATQFSLTVAQALPL 240

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--- 270
               +  +     A P+ +   G          + G  +            L+       
Sbjct: 241 LAGGTSDLTASLTANPLSLTFQGKANI-SGDRFFEGRLTAKTPSLSGAVHWLNLPPIAGS 299

Query: 271 ------RLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
                  L+     +   ++ +  ++ +    +    +
Sbjct: 300 SEIGAFSLASTITATPKRLKFADVEMTANGSPAKGVIE 337


>gi|255531390|ref|YP_003091762.1| hypothetical protein Phep_1486 [Pedobacter heparinus DSM 2366]
 gi|255344374|gb|ACU03700.1| hypothetical protein Phep_1486 [Pedobacter heparinus DSM 2366]
          Length = 1027

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/379 (11%), Positives = 103/379 (27%), Gaps = 33/379 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-- 59
           +++V    G     +L+     P          + +R     +  ++  KG + +     
Sbjct: 1   MKKVFKITGISLCTLLLLLLVTPYLFQ-DTISREVQRSINKSIKGEVKFKG-VGLSFFRH 58

Query: 60  -PFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
            P  ++      +              + LS R     + S +I++   ++D+  +N  +
Sbjct: 59  FPSLTLNLDQFMLKGAAPFEKDTLLYSKALSFRVNLATVFSEQIKIDQFFLDEAVINVEV 118

Query: 117 SSKGVSNWF-------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
             KG +N+        +  +T      + +E I +   ++   D+    +   +DLN   
Sbjct: 119 DEKGRANYDVYESKAKEGGATDTTATAIKIEGIFINKSKLTYNDRSVPMLISAADLNYAG 178

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-LFPLAY 228
                  I  LS  +  GS+                          ++ L          
Sbjct: 179 KGDLSKAIFDLSSKAEIGSLDVYYNNEPYLLNKKINARLVTKINTNSLDLMFDENDLKIN 238

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
            + I   G   + E                   +   +A    ++   + ++        
Sbjct: 239 SLPIHFVGRFSFIEGGYDIKFRTKAKETDL---HNIFTALPPAIAERMEKTNIK------ 289

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
                          K    ++    L+F+    E    ++     E   K   N   K 
Sbjct: 290 ----GYAEIKASLIGKYLAGKNIMPTLSFNLKIREGE--ISNPKAPEPISKLYINLQTKL 343

Query: 349 DDI---QYSVNKKEEKDNS 364
             +      +N      N 
Sbjct: 344 PSLNPDSLYINMDSLYFNI 362


>gi|153807485|ref|ZP_01960153.1| hypothetical protein BACCAC_01765 [Bacteroides caccae ATCC 43185]
 gi|149129847|gb|EDM21059.1| hypothetical protein BACCAC_01765 [Bacteroides caccae ATCC 43185]
          Length = 840

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/376 (10%), Positives = 98/376 (26%), Gaps = 42/376 (11%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------ 55
           +++ L        V+++    +P       F+            K +  +   K      
Sbjct: 1   MKKGLKIAAITVGVIIILMLLLPF-----AFQGKIADIVKTEGNKMLNAQFDFKKLNISL 55

Query: 56  IHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112
               P  SV  +D  +    +       +   ++       L       +  ++I+   L
Sbjct: 56  FRNFPQASVTLEDFWLKGTGEFANDTLVQAGEVTAAINLFSLFGDSGYDISKIFIEDTKL 115

Query: 113 NFYLSSKGVSNW------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           +  +   G +NW                        V L++  +K   +   DQ+     
Sbjct: 116 HAIVLPDGRANWNIMEPDTTASAETPAAEEESSPFKVKLQRFVIKNMNLIYDDQQGKMYA 175

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            + D N   +    +  + L +++   S+  +  G      +      +  A        
Sbjct: 176 DIQDFNATCAGDLGSERTTLKLEAETKSLTYKMNGIPFLANANISAEMDVDADLANNKYT 235

Query: 221 IQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
           ++   +    I   + G +   +         +      K +   + A            
Sbjct: 236 LKDNTIRLNAIQAGIDGWVALKDPAIDMDLKLNTNDIGFKEILSLIPA------------ 283

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339
              +  + +        ++ +   K  +  D     N       +M          ++  
Sbjct: 284 ---IYATEFSSLKTDGTATLNATAKGTLLGDTVPAFNVDMQVKNAMFRYPALPAGVDQIN 340

Query: 340 KNKNDDLKKDDIQYSV 355
            N N      +I  + 
Sbjct: 341 INANVQNPGGNIDLTT 356


>gi|306844609|ref|ZP_07477196.1| AsmA family protein [Brucella sp. BO1]
 gi|306275053|gb|EFM56816.1| AsmA family protein [Brucella sp. BO1]
          Length = 645

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/337 (10%), Positives = 93/337 (27%), Gaps = 37/337 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAF------TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55
           +R  L     +  V+L  A        VP  +     R    ++ +   G  + ++   +
Sbjct: 1   MRWPLFTRLIIAFVILCAAAAATLLAVVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPR 60

Query: 56  IHILPFPSVFFKDIRID--QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113
           + + P        + +     +        + + +    L  + G I   +  I +PH+N
Sbjct: 61  LSVFPILRASLSGVTLSKLTDQGQKPLMSADRIDVELSPLDAIMGHISFSETQIVRPHVN 120

Query: 114 FY-------------LSSKGVSNWFQRKSTMDMIHNVILEKIHVKG-----GRIKIIDQE 155
                           +S G      R     +        +         GR+ + D  
Sbjct: 121 LEAPVSNISQLLDAIANSNGRLGTAIRAQRALLQSGAKKNALAAGQASQPFGRVVVRDGT 180

Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-N 214
                  S+ N+    +  ++ + L       +   +G+  +  + + F +T        
Sbjct: 181 IAFNRAGSEPNVPHDKQITDVNATLEWPRTSSAATLKGSAKWRGEATQFSLTVAQALPLL 240

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---- 270
              +  +     A P+ +   G          + G  +            L+        
Sbjct: 241 AGGTSDLTASLTANPLSLTFQGKANI-SGDRFFEGRLTAKTPSLSGAVRWLNLPPIAGSS 299

Query: 271 -----RLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
                 L+     +   ++ +  ++ +    +    +
Sbjct: 300 EIGAFSLASTITATPKRLKFADVEMTANGSPAKGVIE 336


>gi|265762470|ref|ZP_06091038.1| outer membrane assembly protein [Bacteroides sp. 2_1_16]
 gi|263255078|gb|EEZ26424.1| outer membrane assembly protein [Bacteroides sp. 2_1_16]
          Length = 837

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/347 (10%), Positives = 97/347 (27%), Gaps = 43/347 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQAT----LIVGKKIAVKGGIKIH 57
           +++       +  V+L+  F +P       FR   E         ++         + I 
Sbjct: 1   MKKGFKITAIVIGVILILMFLLPF-----AFRGKIEGIVKSEGNKMLNGHFDFS-SLDIS 54

Query: 58  I---LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPH 111
           +    P  SV   D  +    +       K   ++       L   +   V  + ++   
Sbjct: 55  LFRNFPKASVTLNDFWLKGTGEFENDTLVKAGEVTAAINLFSLFGDDGYDVSKVSVENTR 114

Query: 112 LNFYLSSKGVSNWFQRKSTMDMIH-----------NVILEKIHVKGGRIKIIDQESDQVY 160
           L+  +   G +NW   K                   + L++  +K   +   D++S    
Sbjct: 115 LHAIVLPDGKTNWDIMKPDSSTASETQESGESSTFRIKLQRFVIKNMNVVYDDRQSAMYA 174

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            + + N   S    +  + LS+++   ++  +  G     ++      +  A        
Sbjct: 175 DIHNFNALCSGDLGSDQTLLSLEAETEALTYKMNGIPFLSQANVYAKMDVDADLAHNKFT 234

Query: 221 IQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
           ++        I   + G +   +         + +    K +   + A            
Sbjct: 235 LKKNEFRLNAIKAGIDGWIELKDPAIDMDLKLNTSEIGFKEILSLIPA------------ 282

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
              +    +K       ++ +   K  +  D     +       +M 
Sbjct: 283 ---IYSKEFKNLKTDGTATLEATAKGILQGDTVPQFDVRLAVKNAMF 326


>gi|115522929|ref|YP_779840.1| AsmA family protein [Rhodopseudomonas palustris BisA53]
 gi|115516876|gb|ABJ04860.1| AsmA family protein [Rhodopseudomonas palustris BisA53]
          Length = 617

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 96/280 (34%), Gaps = 12/280 (4%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE-- 84
           I         + Q     G +++V+G  +I + P P V  +D+ +D+ + G    ++   
Sbjct: 26  IPAGWMTSAMQSQLARDTGLRVSVQGTTRIALWPAPRVTLQDVVLDRPDAGERSVRLNVV 85

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-IHNVILEKIH 143
            +     F  L SG  ++ ++ + QP L   L  +  +       T          E++ 
Sbjct: 86  RIEAGVPFAALWSGTPQLTELTLTQPVLQVPLLRERRAAPAAPAPTPSNVFSMPSFERLR 145

Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQIS-ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202
           +  G + + + +      +  ++  ++ A    +    S       +  E T       +
Sbjct: 146 IVDGAVVLSNPQDKVERRIDGISADLAMAEDRRVTGTGSATFGAHPLGFEFTAT---APA 202

Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262
                 + P +    +  +    L     + L G +         SG F   G F+   +
Sbjct: 203 TLGGRESVPVEFSLTAPTLLTSALTSKAELKLNGTVLMING---LSGSFG-GGAFNGWGS 258

Query: 263 LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
            +L A K +L  +       +  ++   +   P S T  D
Sbjct: 259 ADL-AGKPQLKLDLDFQKLALPGTKADARPDAPWSETTFD 297


>gi|256114175|ref|ZP_05454929.1| AsmA family protein [Brucella melitensis bv. 3 str. Ether]
          Length = 645

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/311 (9%), Positives = 86/311 (27%), Gaps = 31/311 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79
            VP  +     R    ++ +   G  + ++   ++ + P        + +     +    
Sbjct: 27  VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126
               + + +    L  + G I   +  I +PH+N                +S G      
Sbjct: 87  LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146

Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           R     +        +         GR+ + D         S+ N+    +  ++ + L 
Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAVNRAGSEPNVPHDKQITDVNATLE 206

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240
                 +   +G+  +  + + F +T           +  +       P+ +   G    
Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTTNPLSLTFQGKANI 266

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291
           +  +  + G  +            L+              L+     +   ++ +  ++ 
Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325

Query: 292 SILPNSSTDED 302
           +    +    +
Sbjct: 326 ANGSPAKGVIE 336


>gi|294852918|ref|ZP_06793591.1| AsmA protein [Brucella sp. NVSL 07-0026]
 gi|294821507|gb|EFG38506.1| AsmA protein [Brucella sp. NVSL 07-0026]
          Length = 645

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/338 (10%), Positives = 97/338 (28%), Gaps = 36/338 (10%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79
            VP  +     R    ++ +   G  + ++   ++ + P        + +     +    
Sbjct: 27  VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126
               + + +    L  + G I   +  I +PH+N                +S G      
Sbjct: 87  LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146

Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           R     +        +         GR+ + D         S+ N+    +  ++ + L 
Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240
                 +   +G+  +  + + F +T           +  +     A P+ +   G    
Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291
           +  +  + G  +            L+              L+     +   ++ +  ++ 
Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
           +    + +      ++  ++E     +   A    DLN
Sbjct: 326 A----NGSPAKGVIEIGLEQEQP-AVTGTLAFEKLDLN 358


>gi|163843856|ref|YP_001628260.1| AsmA family protein [Brucella suis ATCC 23445]
 gi|163674579|gb|ABY38690.1| AsmA family protein [Brucella suis ATCC 23445]
          Length = 645

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/311 (9%), Positives = 88/311 (28%), Gaps = 31/311 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79
            VP  +     R    ++ +   G  + ++   ++ + P        + +     +    
Sbjct: 27  VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126
               + + +    L  + G I   +  I +PH+N                +S G      
Sbjct: 87  LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146

Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           R     +        +         GR+ + D         S+ N+    +  ++ + L 
Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240
                 +   +G+  +  + + F +T           +  +     A P+ +   G +  
Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKVNI 266

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291
           +  +  + G  +            L+              L+     +   ++ +  ++ 
Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325

Query: 292 SILPNSSTDED 302
           +    +    +
Sbjct: 326 ANGSPAKGVIE 336


>gi|37522996|ref|NP_926373.1| hypothetical protein glr3427 [Gloeobacter violaceus PCC 7421]
 gi|35213999|dbj|BAC91368.1| glr3427 [Gloeobacter violaceus PCC 7421]
          Length = 1210

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 106/354 (29%), Gaps = 15/354 (4%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+R LIG   +      G   VPLF+D   FR+  +   +  +G+ + + G +++  L  
Sbjct: 24  LQRTLIGAAGVGLASFAGLALVPLFVDGESFRKPLQEALSRSLGRDV-LLGRVELRTLGG 82

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             +  + +R+  +E  S   +  G  +    LPLL  +I V ++ ID   +       G 
Sbjct: 83  IGLRTEQVRVVNREGTSE-LQARGAFVELALLPLLVRQIEVRNIEIDGAEIYLKRFRDGR 141

Query: 122 SNWFQR---KSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLNLQISARFLNI 176
            N       +   +   N+    + +    ++  D+  +  Q +  S L+L++  +F   
Sbjct: 142 WNVADLGDGQGAGEGPVNLAGTGLTLFDSTVRFDDEGVQPPQRFLASALSLKV-QKFDRA 200

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
             P+++     +             +A  +             K+               
Sbjct: 201 ELPINLQGRIVNA-----LRDKPVATALTLDGTLAWPEDGDWQKLTGNLRILAEKFRPRY 255

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
              +    P  +G+  V                 RL G                      
Sbjct: 256 LSAYTRDIPSLAGLTGVFDLDFVWKGALGGES--RLEGTCGTRLLRWDWPLLFGGRPWLA 313

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350
                D    VS           +G     D+  +      E  +   DL    
Sbjct: 314 RKVKVDTAMGVSSAGVRAERLRLSGEGFDADIQGSVRRPTGESPSPLLDLTVKT 367


>gi|148559550|ref|YP_001259474.1| AsmA family protein [Brucella ovis ATCC 25840]
 gi|148370807|gb|ABQ60786.1| AsmA family protein [Brucella ovis ATCC 25840]
          Length = 645

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/311 (9%), Positives = 87/311 (27%), Gaps = 31/311 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79
            VP  +     R    ++ +   G  + ++   ++ + P        + +     +    
Sbjct: 27  VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126
               + + +    L  + G I   +  I +PH+N                +S G      
Sbjct: 87  LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146

Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           R     +        +         GR+ + D         S+ N+    +  ++ + L 
Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240
                 +   +G+  +  + + F +T           +  +     A P+ +   G    
Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291
           +  +  + G  +            L+              L+     +   ++ +  ++ 
Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325

Query: 292 SILPNSSTDED 302
           +    +    +
Sbjct: 326 ANGSPAKGVIE 336


>gi|37519806|ref|NP_923183.1| hypothetical protein glr0237 [Gloeobacter violaceus PCC 7421]
 gi|35210797|dbj|BAC88178.1| glr0237 [Gloeobacter violaceus PCC 7421]
          Length = 1092

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/349 (12%), Positives = 96/349 (27%), Gaps = 25/349 (7%)

Query: 3   RRVLIGLGFLFSVV---LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           R  +I L     +V   +     VPLF+D    R+  E      + +++ + G +++  L
Sbjct: 14  RWAIISLAATVGLVGAGVTALALVPLFVDSDGLRKPLEEAIAQTLRRRVRL-GKLQVQTL 72

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
               +    + +        +     + +  +  PLLS ++ +  +  ++  L    +  
Sbjct: 73  GGIGLRADRVELFNLRGSEKQLDARSVFVEVDLWPLLSRQVVLKRLEFERLDLALQRNPA 132

Query: 120 GVSNWFQRKSTMDMIHNVILEK----IHVKGGRIKIIDQESDQVYFLS----DLNLQISA 171
           G  N     +                + +    +++ DQ  +    L       +L+   
Sbjct: 133 GQWNVADLLTAQGPDGPGQTGYSGPAVSLVDSTVRVTDQTQNPPRQLRLSNVAFDLRPQN 192

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNF----DNKRSAFKITANFPAKNKAISLKIQLFPLA 227
            +   I+       K  +   GT              ++            + +   P  
Sbjct: 193 PYDLDITFKGDLGEKTPLAVAGTIELPKGDPAAAWGGELRLQTQQLAADQVVGLLGQPAL 252

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL----SAKKSRLSGNFKISDGNV 283
             +      ++ W   Q    G             +       A+   L G+       V
Sbjct: 253 AGLKGLFDLDVRWELSQDQLEGKVKAQALAWLWPEVWGKTAWKARSVDLDGDLTFGPQQV 312

Query: 284 RISRYKLQSILPNSSTDEDNKTKV-SQDEENLLNFSENGAESMHDLNET 331
            + R +L+          D K  +     +       N      D    
Sbjct: 313 AVERLQLKLP----ELTADAKGTLPRFFNQPGQALDLNVKTGEFDPFTA 357


>gi|224826410|ref|ZP_03699512.1| protein of unknown function DUF748 [Lutiella nitroferrum 2002]
 gi|224601511|gb|EEG07692.1| protein of unknown function DUF748 [Lutiella nitroferrum 2002]
          Length = 1123

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/332 (15%), Positives = 109/332 (32%), Gaps = 33/332 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR    +G     ++  ++    +      R      A    G+K+++ G +KI      
Sbjct: 24  RRWPYWVGGGALALVAASWGALAWGVPDVARHAAADWAQGK-GQKLSI-GTMKIEPW-SM 80

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            V   D+R+ +            L + AE   L  G  R     +D+P      +++G  
Sbjct: 81  KVELGDVRLAEGNGA-PLFAARRLVLDAEPTALFIGRWRAALFQLDKPQWFVERNAQGEW 139

Query: 123 NWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV--YFLSDLNLQI 169
           NW                +   +  ++L+ + + GG ++++D    +   + L  +NL +
Sbjct: 140 NWARFVKAVSGPAKPATESKGELPKLVLDLLQLNGGEVRMVDHFGGETRAFDLKPVNLTL 199

Query: 170 S-----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
                        +  +       +  +G       +S+ +   +           +Q F
Sbjct: 200 KELSTLPVDGGSYTLTAELGDGAKLAWKGNVGLQPLQSSGEARLDKLTLASLWPY-VQPF 258

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK----KSRLS------G 274
               P   +L  +  +       +    VA   + L  L L+A        L       G
Sbjct: 259 FHTAPPQGELAASARYQFDLSGKTPQLKVAPFNATLNRLHLAAPGGGSALALKQLALEGG 318

Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
            F ++  +V I+R +L     ++  +   +  
Sbjct: 319 RFDLASSSVDITRLRLSDGELSAQRNGAGQLD 350


>gi|60680457|ref|YP_210601.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
 gi|60491891|emb|CAH06650.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
          Length = 837

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/347 (10%), Positives = 97/347 (27%), Gaps = 43/347 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQAT----LIVGKKIAVKGGIKIH 57
           +++       +  V+L+  F +P       FR   E         ++         + I 
Sbjct: 1   MKKGFKITAIVIGVILILMFLLPF-----AFRGKIEGIVKSEGNKMLNGHFDFS-SLDIS 54

Query: 58  I---LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPH 111
           +    P  SV   D  +    +       K   ++       L   +   V  + ++   
Sbjct: 55  LFRNFPKASVTLNDFWLKGTGEFENDTLVKAGEVTAAINLFSLFGDDGYDVSKVAVENTR 114

Query: 112 LNFYLSSKGVSNWFQRKSTM-----------DMIHNVILEKIHVKGGRIKIIDQESDQVY 160
           L+  +   G +NW   K                   + L++  +K   +   D++S    
Sbjct: 115 LHAIVLPDGKTNWDIMKPDSSTAGETQESGESSTFRIKLQRFVIKNMNVVYDDRQSAMYA 174

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            + + N   S    +  + LS+++   ++  +  G     ++      +  A        
Sbjct: 175 DIHNFNALCSGDLGSDQTLLSLEAETEALTYKMNGIPFLSQANVYAKMDVDADLAHNKFT 234

Query: 221 IQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
           ++        I   + G +   +         + +    K +   + A            
Sbjct: 235 LKKNEFRLNAIKAGIDGWIELKDPAIDMDLKLNTSEIGFKEILSLIPA------------ 282

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
              +    +K       ++ +   K  +  D     +       +M 
Sbjct: 283 ---IYSKEFKNLKTDGTATLEATAKGILQGDTVPQFDVRLAVKNAMF 326


>gi|119897585|ref|YP_932798.1| hypothetical protein azo1294 [Azoarcus sp. BH72]
 gi|119669998|emb|CAL93911.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
          Length = 1307

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 87/289 (30%), Gaps = 21/289 (7%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPS 63
           + + + F    +++  F +P   +   +R + E   T  +G  +A++  +        P 
Sbjct: 35  LCVWIAFAALFLVLREFVLP---NVDAYRAEVEAGLTEALGAPVAIE-HLSGDWSGMRPR 90

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
           +    + +   E      ++E +     +L L         + ID P +     + G   
Sbjct: 91  LHLTGLALRDAEG-RPALRLERVDATLGWLSLAQLRPFFHRLEIDGPDVAITRRADGRLE 149

Query: 124 WFQRKSTMDMI------HNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNI 176
                              +   +I V+   +   D+        LS +  ++   F   
Sbjct: 150 IAGMTMDDGPSDGSFLDWLLAQRQIVVRDAALTWTDELRGAPPLRLSQVQFRLERSFHRH 209

Query: 177 ISPLSI---DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
              L       +  ++   G       ++                L      + YP+ + 
Sbjct: 210 RFALQAQPPAQLASALDLRGELQQLVPQTPAASVGKLYVALDHADLGGWRQWVDYPVALS 269

Query: 234 LFGNLFWN-----EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
             G L        + +   +   S+AG  ++L +     + +RL G   
Sbjct: 270 GSGGLRAWIDLEADGRQAITTDVSLAGVETRLGDSLPVLQLARLGGRLT 318


>gi|256061653|ref|ZP_05451792.1| AsmA family protein [Brucella neotomae 5K33]
          Length = 645

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/311 (9%), Positives = 87/311 (27%), Gaps = 31/311 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79
            VP  +     R    ++ +   G  + ++   ++ + P        + +     +    
Sbjct: 27  VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126
               + + +    L  + G I   +  I +PH+N                +S G      
Sbjct: 87  LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146

Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           R     +        +         GR+ + D         S+ N+    +  ++ + L 
Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240
                 +   +G+  +  + + F +T           +  +     A P+ +   G    
Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291
           +  +  + G  +            L+              L+     +   ++ +  ++ 
Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325

Query: 292 SILPNSSTDED 302
           +    +    +
Sbjct: 326 ANGSPAKGVIE 336


>gi|222056862|ref|YP_002539224.1| protein of unknown function DUF748 [Geobacter sp. FRC-32]
 gi|221566151|gb|ACM22123.1| protein of unknown function DUF748 [Geobacter sp. FRC-32]
          Length = 992

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/383 (13%), Positives = 113/383 (29%), Gaps = 43/383 (11%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP-SVFFKDIRIDQKEDGSFE 80
               F+     +    ++     G+K+A+ G   I I PF  ++  +D+R   +  G   
Sbjct: 20  GFVAFVLPGIVKNQAVQRVEAATGRKLAIGG---ISINPFAWTIEVRDLRFSDR-GGETF 75

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---RKSTMDMIHNV 137
           +      +      L      +    I   HL        + N+     R+         
Sbjct: 76  ATFSSARIAVSPSSLYRRAPIIASARITSLHLRIVRVGANIYNFSDLFKRQPQHSQQSRF 135

Query: 138 ILEKIHVKGGRIKIIDQES--DQVYFLSDLNLQIS-----ARFLNIISPLSIDSIKGSVI 190
            L  + +  G +  IDQ    ++ + L  + L +      +          + +      
Sbjct: 136 SLNNLMITNGSVDFIDQGLPIEKRHELRKIELAVPFITTISYLAGRYITPRLSAEVNGSP 195

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250
               G       A + +A     N ++   +   P A P+ ++              SG 
Sbjct: 196 LHVEGKLRPFPKAVEASATVEFNNASLPHYLAYIPGALPVRVE--------------SGR 241

Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR----ISRYKLQSILPNSSTDEDNKT- 305
            S           +        + N  ++D  V     I    L+ +   ++ +      
Sbjct: 242 MSAKVA-MSYRAAQKENPGLTFNSNVTLADTKVADRKGIPLLALRQLDVAANLEIGGPGG 300

Query: 306 -KVSQDEENLLNFSE---NGAESMHDLNETDFFEEEEKKN----KNDDLKKDDIQYSVNK 357
            ++ +        S            L   +      K+N     +  L+  ++++  ++
Sbjct: 301 TRLEKGSVQARQLSAWVGKREGITLALLSLEGGTYSRKENLLKVADVTLRDGNLRFFRDR 360

Query: 358 KEEKDNSHDKENQENFSGDKMIL 380
           K        +E++   +G K  L
Sbjct: 361 KGVFLPLLHREDKGTVTGKKTPL 383


>gi|319762625|ref|YP_004126562.1| hypothetical protein Alide_1931 [Alicycliphilus denitrificans BC]
 gi|330824715|ref|YP_004388018.1| hypothetical protein Alide2_2130 [Alicycliphilus denitrificans
           K601]
 gi|317117186|gb|ADU99674.1| hypothetical protein Alide_1931 [Alicycliphilus denitrificans BC]
 gi|329310087|gb|AEB84502.1| protein of unknown function DUF748 [Alicycliphilus denitrificans
           K601]
          Length = 1252

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/374 (11%), Positives = 107/374 (28%), Gaps = 38/374 (10%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEG 85
           +     R   ER A+  +G+K+ V    K+  LP+        + I  ++  + + +I  
Sbjct: 39  VVPPVARSQIERHASEALGRKVTVS---KVEFLPWTLEATVHGLSIASEDGKASQVQIAR 95

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----------RKSTMDMIH 135
           + + AE   L      +  + +D+P ++   ++ G  ++             +       
Sbjct: 96  IYIDAELQSLWRLAPVIDAVQVDEPVIHVTQTAPGHYDFDDVLDRLAQQPKTRDGEARPL 155

Query: 136 NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195
              L  + ++GG +   D+   +V+ L  L + +                +  V      
Sbjct: 156 RFALYNLALRGGALDFDDRTVGKVHMLRGLRIDVP------FLSNFSADREVKVTPRLAF 209

Query: 196 NFDNKRSAFKITANFPAKNKAISLKIQLFPLA-YPIIIDLFGNLFWNEKQPIYSGVFSVA 254
             +             A+N+   + + +      P    +   +    K  +      + 
Sbjct: 210 ELNGSAFDTAAQTTPFAQNRQTEVNLHVDGFDLGPFSGYIPSRVPVRLKSGVLDADLKLG 269

Query: 255 GDFSKLLNLELSAKKSRLSGN----------FKISDGNVRISRYK-LQSILPNSSTDEDN 303
            +          +   RL G                  V +   + LQ I+   + D   
Sbjct: 270 FEQEDATPRLTISGGVRLHGVRTTDAAGEPLLDFDALQVALKDVRPLQRIVDVDAIDWHG 329

Query: 304 ------KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNK 357
                 +          L    +GA++             + +     L    + ++   
Sbjct: 330 VHVHLRRDVAGAVALPGLAQPADGADATAKPTPAPQDAAWQVRLGRVGLHDGVVDWTDAS 389

Query: 358 KEEKDNSHDKENQE 371
                 +   EN +
Sbjct: 390 LPGGKAAWKAENLQ 403



 Score = 48.7 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 74/261 (28%), Gaps = 20/261 (7%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            V    +R             + L +  + +  L   + V  +     H++      G  
Sbjct: 284 GVRLHGVRTTDAAG-EPLLDFDALQVALKDVRPLQRIVDVDAIDWHGVHVHLRRDVAGAV 342

Query: 123 NWF--------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLNL 167
                               +  D    V L ++ +  G +   D             NL
Sbjct: 343 ALPGLAQPADGADATAKPTPAPQDAAWQVRLGRVGLHDGVVDWTDASLPGGKAAWKAENL 402

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
           Q  A  + +     +     + ++ G    D  R A +  A       A+S++     +A
Sbjct: 403 QAEAWAVALPFQQPLQFRLSTQLSGGAAKGDAARLAVQGQATDVQAQAAVSVRGLSMAMA 462

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
            P +      +       +      +A +   +     +    +L+ +   ++   R  R
Sbjct: 463 APYL----AGVLKPSLAGMLDADLGLARNGDAMAAKVATLSLGKLALDCAAAEKKCRTLR 518

Query: 288 YKLQSILPNSSTDEDNKTKVS 308
               +    +S  E  + +VS
Sbjct: 519 TAGIADAAKTSLAEAGRLEVS 539


>gi|189425668|ref|YP_001952845.1| AsmA family protein [Geobacter lovleyi SZ]
 gi|189421927|gb|ACD96325.1| AsmA family protein [Geobacter lovleyi SZ]
          Length = 1094

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 51/354 (14%), Positives = 110/354 (31%), Gaps = 30/354 (8%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI 83
           P  +D   ++          + +++ + G  +   +  P   F D+ I ++         
Sbjct: 32  PRLLDLNSYKTQLTELLQQQLKRQVRL-GNSQFSWVLGPEFTFSDLYIQERNSSLEFLSA 90

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIH 143
             +S R   LPLL+ +I + ++ ID         ++GV N           +++    + 
Sbjct: 91  RRISFRLALLPLLNKKIELREIIIDDARATVSRDAQGVMNIDDLLQPAPDAYDLRARGLR 150

Query: 144 VKGGRIKIIDQESDQ---VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200
           ++ G +   DQ S +      +S +NL I        S   + +   ++     G+ +  
Sbjct: 151 IRNGTLFWRDQASAEICTRLTVSGINLSIDKLIRGRKSSYKLAA---TLEGSSPGSINTA 207

Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYP-IIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259
            +          +   I  K+ L  + Y      +   + +       S   +V G   +
Sbjct: 208 GTIRLPKTGNLLQQTDIDAKLDLTQVEYWRFWPYIDDYVPFPSPGGTASLNLAVKG---R 264

Query: 260 LLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319
             NL+ +      +            + +             D K   S  +   +  S 
Sbjct: 265 WQNLKANGTLLLRNPKVVWP------TVFHAVVAPKQLQLAVDLKWTPSLLDMPSVQLSL 318

Query: 320 NGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENF 373
           +G                +   +  DL+  D   SV    E  +    +N   F
Sbjct: 319 DGFAI-------------KGAVRLGDLQGKDPSISVKATSEPFDYLRVKNYIPF 359


>gi|254719632|ref|ZP_05181443.1| AsmA family protein [Brucella sp. 83/13]
 gi|306837733|ref|ZP_07470601.1| AsmA family protein [Brucella sp. NF 2653]
 gi|306407189|gb|EFM63400.1| AsmA family protein [Brucella sp. NF 2653]
          Length = 645

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/311 (9%), Positives = 85/311 (27%), Gaps = 31/311 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79
            VP  +     R    ++ +   G  + ++   ++ + P        + +     +    
Sbjct: 27  VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126
               + + +    L  + G I   +  I +PH+N                +S G      
Sbjct: 87  LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146

Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           R     +        +         GR+ + D         S+ N+    +  ++ + L 
Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240
                 +   +G+  +  + + F +T           +  +     A P+ +   G    
Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291
                 + G  +            L+              L+     +   ++ +  ++ 
Sbjct: 267 -SGDRFFEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325

Query: 292 SILPNSSTDED 302
           +    +    +
Sbjct: 326 ANGSPAKGVIE 336


>gi|225853080|ref|YP_002733313.1| AsmA family protein [Brucella melitensis ATCC 23457]
 gi|256045222|ref|ZP_05448120.1| AsmA family protein [Brucella melitensis bv. 1 str. Rev.1]
 gi|256263437|ref|ZP_05465969.1| AsmA [Brucella melitensis bv. 2 str. 63/9]
 gi|260565181|ref|ZP_05835665.1| AsmA protein [Brucella melitensis bv. 1 str. 16M]
 gi|225641445|gb|ACO01359.1| AsmA family protein [Brucella melitensis ATCC 23457]
 gi|260151249|gb|EEW86343.1| AsmA protein [Brucella melitensis bv. 1 str. 16M]
 gi|263093446|gb|EEZ17496.1| AsmA [Brucella melitensis bv. 2 str. 63/9]
 gi|326409622|gb|ADZ66687.1| AsmA family protein [Brucella melitensis M28]
          Length = 645

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/311 (9%), Positives = 87/311 (27%), Gaps = 31/311 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79
            VP  +     R    ++ +   G  + ++   ++ + P        + +     +    
Sbjct: 27  VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126
               + + +    L  + G I   +  I +PH+N                +S G      
Sbjct: 87  LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146

Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           R     +        +         GR+ + D         S+ N+    +  ++ + L 
Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240
                 +   +G+  +  + + F +T           +  +     A P+ +   G    
Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291
           +  +  + G  +            L+              L+     +   ++ +  ++ 
Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325

Query: 292 SILPNSSTDED 302
           +    +    +
Sbjct: 326 ANGSPAKGVIE 336


>gi|254710638|ref|ZP_05172449.1| AsmA family protein [Brucella pinnipedialis B2/94]
 gi|254714822|ref|ZP_05176633.1| AsmA family protein [Brucella ceti M644/93/1]
 gi|254717880|ref|ZP_05179691.1| AsmA family protein [Brucella ceti M13/05/1]
 gi|256032131|ref|ZP_05445745.1| AsmA family protein [Brucella pinnipedialis M292/94/1]
 gi|256160327|ref|ZP_05458021.1| AsmA family protein [Brucella ceti M490/95/1]
 gi|256255532|ref|ZP_05461068.1| AsmA family protein [Brucella ceti B1/94]
          Length = 645

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/311 (9%), Positives = 87/311 (27%), Gaps = 31/311 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79
            VP  +     R    ++ +   G  + ++   ++ + P        + +     +    
Sbjct: 27  VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126
               + + +    L  + G I   +  I +PH+N                +S G      
Sbjct: 87  LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146

Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           R     +        +         GR+ + D         S+ N+    +  ++ + L 
Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240
                 +   +G+  +  + + F +T           +  +     A P+ +   G    
Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291
           +  +  + G  +            L+              L+     +   ++ +  ++ 
Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325

Query: 292 SILPNSSTDED 302
           +    +    +
Sbjct: 326 ANGSPAKGVIE 336


>gi|326539325|gb|ADZ87540.1| AsmA family protein [Brucella melitensis M5-90]
          Length = 621

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/313 (9%), Positives = 87/313 (27%), Gaps = 31/313 (9%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDG 77
              VP  +     R    ++ +   G  + ++   ++ + P        + +     +  
Sbjct: 1   MAVVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQ 60

Query: 78  SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNW 124
                 + + +    L  + G I   +  I +PH+N                +S G    
Sbjct: 61  KPLMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGT 120

Query: 125 FQRKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
             R     +        +         GR+ + D         S+ N+    +  ++ + 
Sbjct: 121 AIRAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNAT 180

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNL 238
           L       +   +G+  +  + + F +T           +  +     A P+ +   G  
Sbjct: 181 LEWPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKA 240

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYK 289
             +  +  + G  +            L+              L+     +   ++ +  +
Sbjct: 241 NISRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVE 299

Query: 290 LQSILPNSSTDED 302
           + +    +    +
Sbjct: 300 MTANGSPAKGVIE 312


>gi|163753139|ref|ZP_02160263.1| outer membrane assembly protein [Kordia algicida OT-1]
 gi|161326871|gb|EDP98196.1| outer membrane assembly protein [Kordia algicida OT-1]
          Length = 903

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 53/388 (13%), Positives = 104/388 (26%), Gaps = 51/388 (13%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI- 58
           +++L   G    V+++     P       F+          + K +  +       +   
Sbjct: 4   KKILKITGITLLVLIIALAVTPYL-----FKGKIIAMVKDNINKNVNAQVDFTDADVSFF 58

Query: 59  --LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSG---EIRVFDMYIDQPH 111
              P  S+  +D+ +              + +++      L  G    I+V+   ID   
Sbjct: 59  RNFPKASIVLEDVEVINNAPFENDTLFYGKEVAITTAIGELFKGTDEAIQVYSFTIDNAK 118

Query: 112 LNFYLSSKGVSNWFQRKSTMDMIH---------NVILEKIHVKGGRIKIIDQESDQVYFL 162
           LN  +   G +N+   K                   ++  H+    I   D +S  +  L
Sbjct: 119 LNIQVDESGNANYDIAKPNTTETPENVSKTSDFKFKIDNYHILNTDINYFDAKSKTLLAL 178

Query: 163 SDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221
            D+  +    F    S L   +    S         D +            +N   +  +
Sbjct: 179 KDVQHEGFGDFSLATSELDTQTDALVSFAIGDMNYIDKQHIKLDALIGMDLENGKYTF-L 237

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS------------AKK 269
           +   L   + +   G +  N                 K     +             A  
Sbjct: 238 ENEALVNQLPLKFEGFVKVNPDSQEVDISLQTPSSDFKNFLAVIPEAYAKNISTVQTAGN 297

Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
             +SG  K      RI    ++ +  N+S            +   L  S         L 
Sbjct: 298 FEVSGEIKGLVTETRIPTIDIKVVSNNASF-----------KYPDLPKSVENININAQLK 346

Query: 330 ETDFFEEEEKKN-KNDDLKKDDIQYSVN 356
            T    E+   +  N   K D+  +  N
Sbjct: 347 NTTGKTEDTYVDINNLAFKIDEDAFRGN 374


>gi|71907231|ref|YP_284818.1| hypothetical protein Daro_1599 [Dechloromonas aromatica RCB]
 gi|71846852|gb|AAZ46348.1| Protein of unknown function DUF748 [Dechloromonas aromatica RCB]
          Length = 1124

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/333 (12%), Positives = 102/333 (30%), Gaps = 39/333 (11%)

Query: 4   RVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61
           ++   LG    V+ ++G F  P        +   ++Q +L + ++++++   +I I P+ 
Sbjct: 26  KLGKWLGIFLLVIGVLGFFAAPPL-----LKSILQKQLSLQLHREVSIE---QIAINPYA 77

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S     + I   + G   +  + L +      +      V ++ +    L     ++G 
Sbjct: 78  LSAKVNGLSIR-ADGGKEVAGFDELFVNLSSASIFKLAAVVDEVRLQGLRLAVSRVAEGR 136

Query: 122 SNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
            +           +           L  I +   +I   DQ   +V+ +SD+NL +    
Sbjct: 137 YDISDLLDEWMKPKDEPEKDTPRFSLNNIQLINAKIVFDDQPKGKVHTISDINLALPFVS 196

Query: 174 LNII----------------SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217
                               SPL++             +       F +    P   +++
Sbjct: 197 SLPYQAEVLVHPAFSAKINGSPLALTGESKPFTTTHESHLSLDLDRFDLAVLQPYLPESL 256

Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
             ++    L   +       +          G   V+G      + +      RL     
Sbjct: 257 PFRLNAGTLDTEMKAMFK-EVSDKVYSVTVIGAAHVSGLVLAESDGQALVGWKRLDVELD 315

Query: 278 I---SDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                +    + R  L  +  + + ++  +  V
Sbjct: 316 SIDPLNRKAAVKRVALDGLDVSLAVNKQGEFNV 348


>gi|209809078|ref|YP_002264616.1| hypothetical protein VSAL_II0269 [Aliivibrio salmonicida LFI1238]
 gi|208010640|emb|CAQ81023.1| putative membrane protein [Aliivibrio salmonicida LFI1238]
          Length = 1032

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/401 (11%), Positives = 122/401 (30%), Gaps = 48/401 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61
           R     L        +    VP        ++    Q + ++ + + +     I   PF 
Sbjct: 20  RWSTYFLTAYLFYAAMLGLLVPYI-----AKQQIPEQLSALIERPVTLT---DITFNPFT 71

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK- 119
             +  +   I   ED +    +E  S+R  F   + +  I V  + I++P ++    +  
Sbjct: 72  LQLDVQGFAIL--EDTTPFISLEHASVRLNFWQSIFNAAIFVEHITINKPFVDIERLNNP 129

Query: 120 --------------GVSNWFQRKSTMDMIHNVI---------LEKIHVKGGRIKIIDQES 156
                                          +          ++   +    ++ +D  S
Sbjct: 130 DELVFNFSDILTTIAKKTASDPIVEEPTDEVIDRHALLFPVLIKHTRITQANVQFLDGVS 189

Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216
                  ++NL++ A     +   ++ +    +      +        ++          
Sbjct: 190 GAKLEYPNINLEVGAFSTQGLLTDAVPTNHYQLHMT-DADSGTVDVQGQVQLTPLEVVGN 248

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF 276
           + +K    P  +   I           +   +  + V     +  N ++ A  +   G F
Sbjct: 249 LDIKQIQLPRLWGF-IAKDMVAKLTSGKVSLASNYHVVQTIGETENDDVMAITTD-RGMF 306

Query: 277 KISDGN--------VRISRYKLQSILPNSSTDEDNKTKVSQDEEN-LLNFSENGAESMHD 327
            ++D N        + +  + +  I  + +    +   ++ ++ N  +N ++ G + +H 
Sbjct: 307 SLNDLNFDADDKSILSLPVFSVNDIKTDVNQQTIDIASITSNDLNVAVNVNKKGVDLIHL 366

Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
                F +E  K  +  ++K       VN   +   +  KE
Sbjct: 367 FTPKSFSQESTKSPEKTEVKSPKESAVVNSDNDGVTAESKE 407


>gi|261752889|ref|ZP_05996598.1| AsmA family protein [Brucella suis bv. 5 str. 513]
 gi|261742642|gb|EEY30568.1| AsmA family protein [Brucella suis bv. 5 str. 513]
          Length = 619

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/310 (9%), Positives = 87/310 (28%), Gaps = 31/310 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80
           VP  +     R    ++ +   G  + ++   ++ + P        + +     +     
Sbjct: 2   VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127
              + + +    L  + G I   +  I +PH+N                +S G      R
Sbjct: 62  MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121

Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                +        +         GR+ + D         S+ N+    +  ++ + L  
Sbjct: 122 AQRALLQSGANKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                +   +G+  +  + + F +T           +  +     A P+ +   G    +
Sbjct: 182 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 241

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292
             +  + G  +            L+              L+     +   ++ +  ++ +
Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300

Query: 293 ILPNSSTDED 302
               +    +
Sbjct: 301 NGSPAKGVIE 310


>gi|301161991|emb|CBW21535.1| putative outer membrane protein [Bacteroides fragilis 638R]
          Length = 837

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/347 (10%), Positives = 97/347 (27%), Gaps = 43/347 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQAT----LIVGKKIAVKGGIKIH 57
           +++       +  V+L+  F +P       FR   E         ++         + I 
Sbjct: 1   MKKGFKITAIVIGVILILMFLLPF-----AFRGKIEGIVKSEGNKMLNGHFDFS-SLDIS 54

Query: 58  I---LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPH 111
           +    P  SV   D  +    +       K   ++       L   +   V  + ++   
Sbjct: 55  LFRNFPKASVTLNDFWLKGTGEFENDTLVKAGEVTAAINLFSLFGDDGYDVSKVSVENTR 114

Query: 112 LNFYLSSKGVSNWFQRKSTMDMIH-----------NVILEKIHVKGGRIKIIDQESDQVY 160
           L+  +   G +NW   K                   + L++  +K   +   D++S    
Sbjct: 115 LHAIVLPDGKTNWDIMKPDSSTASETQESGESSTFRIKLQRFVIKNMNVVYDDRQSAMYA 174

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            + + N   S    +  + LS+++   ++  +  G     ++      +  A        
Sbjct: 175 DIHNFNALCSGDLGSDQTLLSLEAETEALTYKMNGIPFLSQANVYAKMDVDADLAHNKFT 234

Query: 221 IQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
           ++        I   + G +   +         + +    K +   + A            
Sbjct: 235 LKKNEFRLNAIKAGIDGWIELKDPAIDMDLKLNTSEIGFKEILSLIPA------------ 282

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
              +    +K       ++ +   K  +  D     +       +M 
Sbjct: 283 ---IYSKEFKNLKTDGTATLEATAKGILQGDMVPQFDVRLAVKNAMF 326


>gi|253563682|ref|ZP_04841139.1| outer membrane assembly protein [Bacteroides sp. 3_2_5]
 gi|251947458|gb|EES87740.1| outer membrane assembly protein [Bacteroides sp. 3_2_5]
          Length = 837

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/347 (10%), Positives = 97/347 (27%), Gaps = 43/347 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQAT----LIVGKKIAVKGGIKIH 57
           +++       +  V+L+  F +P       FR   E         ++         + I 
Sbjct: 1   MKKGFKITAIVIGVILILMFLLPF-----AFRGKIEGIVKSEGNKMLNGHFDFS-SLDIS 54

Query: 58  I---LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPH 111
           +    P  SV   D  +    +       K   ++       L   +   V  + ++   
Sbjct: 55  LFRNFPKASVTLNDFWLKGTGEFENDTLVKAGEVTAAINLFSLFGDDGYDVSKVSVENTR 114

Query: 112 LNFYLSSKGVSNWFQRKSTMDMIH-----------NVILEKIHVKGGRIKIIDQESDQVY 160
           L+  +   G +NW   K                   + L++  +K   +   D++S    
Sbjct: 115 LHAIVLPDGKTNWDIMKPDSSTASETQESGESSTFRIKLQRFVIKNMNVVYDDRQSAMYA 174

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            + + N   S    +  + LS+++   ++  +  G     ++      +  A        
Sbjct: 175 DIHNFNALCSGDLGSDQTLLSLEAETEALTYKMNGIPFLSQANVYAKMDVDADLAHNKFT 234

Query: 221 IQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
           ++        I   + G +   +         + +    K +   + A            
Sbjct: 235 LKKNEFRLNAIKAGIDGWIELKDPAIDMDLKLNTSEIGFKEILSLIPA------------ 282

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
              +    +K       ++ +   K  +  D     +       +M 
Sbjct: 283 ---IYSKEFKNLKTDGTATLEATAKGILQGDMVPQFDVRLAVKNAMF 326


>gi|171056974|ref|YP_001789323.1| hypothetical protein Lcho_0283 [Leptothrix cholodnii SP-6]
 gi|170774419|gb|ACB32558.1| protein of unknown function DUF748 [Leptothrix cholodnii SP-6]
          Length = 1016

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 78/298 (26%), Gaps = 26/298 (8%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-P 62
           RV +      +V+ +    +         +   E   +  +G  + +    +I I P+  
Sbjct: 26  RVSLWTAGTLAVLALAWTLLIGSWLPGFIKPRIEAAGSDALGTPMVLD---RITIAPWKL 82

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            V    +R+ +    +    +     +     +      +  + + QP +N    S    
Sbjct: 83  VVQLDGLRVGEA--AAPLFTLGSAQTQLSLQSIRQRAPVLASLTLQQPRVNVERLSAERF 140

Query: 123 NWFQ-------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
           N+                           L  I ++GG +   D      + +  L + +
Sbjct: 141 NFSAVLDHVKARQAAQPPAPPSPEPARFALHNIRLEGGALHYRDAVLQTEHHVEALRIGL 200

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
                          ++  V        D         A   A  K   L + L  +   
Sbjct: 201 P------FISSLPSDVETEVQPLLEARIDGSALRLDGHARPFAAAKPAELALDLQGVKLA 254

Query: 230 IIID-LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
                L   L       +  G        S     E +    R+ G   IS  ++ + 
Sbjct: 255 DWASLLRAVLPAEFAPQVLQGQLDTKLAISFEARPEPAPPSLRVRGELAISGFDLAVP 312


>gi|311108342|ref|YP_003981195.1| hypothetical protein AXYL_05180 [Achromobacter xylosoxidans A8]
 gi|310763031|gb|ADP18480.1| hypothetical protein AXYL_05180 [Achromobacter xylosoxidans A8]
          Length = 1207

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/264 (10%), Positives = 82/264 (31%), Gaps = 27/264 (10%)

Query: 36  FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95
             +  + ++G+ ++V G I  +     +V  +D+ + Q +  +    +  L + A +  L
Sbjct: 6   LVQDVSKMIGRDVSV-GDISFNPF-TLTVRARDLAVAQPDSQTPLLTLAELDVSAAWTSL 63

Query: 96  LSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---------------RKSTMDMIHNVILE 140
                 V  M + +P++          N+                      + +    L 
Sbjct: 64  FWFAPVVDRMTLREPNIAIVREDVTRFNFSDIQQRVAELTAAQPEEPAKPDEGLPRFSLN 123

Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200
            + ++ G I + D+ + +   + ++ + +        +          V        +  
Sbjct: 124 NMVIENGSITLDDKVTGRKQVVDEVGVGVPFISTFGYAT------DIDVQPRVHLRINGS 177

Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL 260
                  A    K  + +L++    L      D+           + S +   +      
Sbjct: 178 PFDLNGVARPFDKVPSSTLRVAFNGLQLEKWADV---WPMPLPFKVESALLD-SNLQVVF 233

Query: 261 LNLELSAKKSRLSGNFKISDGNVR 284
              + +  K R+ G+  +   ++R
Sbjct: 234 EQPKDAPPKIRVVGDLGLRRLDLR 257


>gi|114327247|ref|YP_744404.1| asmA family protein [Granulibacter bethesdensis CGDNIH1]
 gi|114315421|gb|ABI61481.1| asmA family protein [Granulibacter bethesdensis CGDNIH1]
          Length = 937

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/346 (13%), Positives = 98/346 (28%), Gaps = 39/346 (11%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66
           I +  L  + +V A  V L +D    R   E     + G    ++G + +   P+P +F 
Sbjct: 31  IAVSGLVVLSIVAAGAVWLMLDQAVIRHRIEASLYKVSGHPAHIEGPLGLAFNPWPVLFV 90

Query: 67  KDIRIDQK----------EDGSF-ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +++ + Q           +       + + ++      PLL G I V  + + +  +   
Sbjct: 91  REVSLAQPEEPSGAALRHDWPDPWFLRAQDITAGIALWPLLHGHITVSSLSLARLDIRMT 150

Query: 116 LSSKGVSNWFQRKSTMDMI--------------------HNVILEKIHVKGGRIKIIDQE 155
            +  G  NW  ++                              +  + +    +   D  
Sbjct: 151 RNHAGEENWIIKRIKAPSASAAPPPVSAAGEAVAPRPKRAVPPVRVLRIGEASVVYHDLR 210

Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT-GNFDNKRSAFKITANFPAKN 214
           +  V+    L L  + +   I   LS       + A    G+ D      +  +     N
Sbjct: 211 NGSVWAAEKLRLHATDQQGTIALMLSGLVQGIPMRALVEGGSVDALLDPDEQHSWPLQIN 270

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274
             +   +          + + G +        +     V+        L L      L  
Sbjct: 271 AQLLPTLHGRLDRNNPHLSVSGVVDHPRHGRGFHL-MVVSRVLDGARLLPLRQAIPALD- 328

Query: 275 NFKISDGNVRISRYKLQSILPNS---STDEDNKTKVSQDEENLLNF 317
             ++   NV            +    +   D+   V Q    + + 
Sbjct: 329 --QLVGKNVPPPEIWSAIAALHDVSLTFRLDDDATVQQGLSPVFSV 372


>gi|303325922|ref|ZP_07356365.1| LigA [Desulfovibrio sp. 3_1_syn3]
 gi|302863838|gb|EFL86769.1| LigA [Desulfovibrio sp. 3_1_syn3]
          Length = 684

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 55/381 (14%), Positives = 107/381 (28%), Gaps = 62/381 (16%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++RVL+ +  +  V+ V    +   ID                GK +       + +LP 
Sbjct: 1   MKRVLLWILGIVIVLGVAGAILLGRIDTQFVVNQIADATAKATGKPLVFASAPSLSLLP- 59

Query: 62  PSVFFKDIRIDQKEDGSFES-KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS-- 118
           P V F      + +DG   +  ++   +  E  PLLSG + V ++ +D P L        
Sbjct: 60  PGVKFGQAGWGEIKDGQGLAVSVKSGMVELELAPLLSGNLVVREVRLDNPVLEVREGKAV 119

Query: 119 KGVSN------------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
            G                            V L ++ V+ G ++ +D        + DLN
Sbjct: 120 SGQDAPAAAPAAPPVSGAQTGAVAPSDELPVELMRLVVRQGEVRYVDAR-GVHLEIKDLN 178

Query: 167 LQISARFLNIISPLSIDS-----------IKGSVIAEGTGNFDNKRSAFK---------- 205
           L +        + +  D            + G++  +    +      F+          
Sbjct: 179 LSVENLRRREEAGMQCDFSFDLKEDQKAILAGNLALDAKLRYYAPHLTFRQISLTVTPLG 238

Query: 206 ----ITANFPAKNKAISLKIQLFPLAYPI--------IIDLFGNLFWNEKQPIYSGVFSV 253
                 A         +L +Q   L             + L G      +   + G  S+
Sbjct: 239 GLLPKEAGPAQLVCEGALNLQTQSLRLATARLSTPQARLTLGGEATLTPQA--FKGTVSL 296

Query: 254 AGDFSKLLNLELSAKKS------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
            G   KL  L     K             + +D  + + +  +Q               +
Sbjct: 297 EGSPRKLAALTGQTLKPSDNDVLSFKSVLEYADDTLHLRQIVMQL----DDIPVRGDLSL 352

Query: 308 SQDEENLLNFSENGAESMHDL 328
           +      ++          D 
Sbjct: 353 ALGTPLAISGGIQTGMINLDK 373


>gi|254704852|ref|ZP_05166680.1| AsmA family protein [Brucella suis bv. 3 str. 686]
          Length = 645

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/311 (9%), Positives = 87/311 (27%), Gaps = 31/311 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79
            VP  +     R    ++ +   G  + ++   ++ + P        + +     +    
Sbjct: 27  VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126
               + + +    L  + G I   +  I +PH+N                +S G      
Sbjct: 87  LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146

Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           R     +        +         GR+ + D         S+ N+    +  ++ + L 
Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240
                 +   +G+  +  K + F +T           +  +     A P+ +   G    
Sbjct: 207 WLRTSSAATLKGSAKWRGKATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291
           +  +  + G  +            L+              L+     +   ++ +  ++ 
Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325

Query: 292 SILPNSSTDED 302
           +    +    +
Sbjct: 326 ANGSPAKGVIE 336


>gi|218442203|ref|YP_002380532.1| hypothetical protein PCC7424_5316 [Cyanothece sp. PCC 7424]
 gi|218174931|gb|ACK73664.1| protein of unknown function DUF490 [Cyanothece sp. PCC 7424]
          Length = 1982

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/325 (14%), Positives = 111/325 (34%), Gaps = 15/325 (4%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65
           LIG G L ++ + G   V  F+ +       E Q +  +G+++ +       +     + 
Sbjct: 35  LIGGGVLIALGVGGYLGVRYFV-YERLSPLIEAQLSNFLGREVNLGEVESFSL---THIR 90

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
           F +  I      +  + ++ ++++   LPLL G     ++ +  P++       G     
Sbjct: 91  FGNTSIPATPTDADNASVDAVNIQFNILPLLLGRPLPLEVTLVDPNVYIDQDKTGKW-VD 149

Query: 126 QRKSTMDMIHNVILE-KIHVKGGRIKIIDQESDQVYFL--SDLNLQISARFLNIISPLSI 182
                 +    + L+ K++++   + +   +  Q   +        I+A    +   L +
Sbjct: 150 IELPEQEEELPIDLDVKVNLEDADLALKPNQLKQPVTIQADGTARYITADPQQLQYDLDV 209

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL--FPLAYPIIIDLFGNLFW 240
           + +K  V  EG    D  ++   +  N  A  +  +L         +  +  DL  N+  
Sbjct: 210 EVLKSDVNLEGKTVLDTGQTQLNLQVNRLALGEIAALLPANLINLNSGTLNADLNLNVPS 269

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300
            EK     G  +V+          L     + +         V I ++++      ++  
Sbjct: 270 LEKIEGTQGQGNVSLTQIAGRLPTLKVP-IKANVELGFEGQTVLIDQFRV----SLNNIV 324

Query: 301 EDNKTKVSQDEENLLNFSENGAESM 325
              K  +   +   +    N  +  
Sbjct: 325 AQAKGSIDWQKGYNIQAQINPFQVT 349


>gi|182680265|ref|YP_001834411.1| AsmA family protein [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182636148|gb|ACB96922.1| AsmA family protein [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 655

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/343 (14%), Positives = 103/343 (30%), Gaps = 38/343 (11%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           R  IGLG L ++ ++ +   P     +  R + E Q     G  +   G   + +LP P 
Sbjct: 27  RSAIGLGILMALGIIVSLVAPWLFSASALRGEIEAQIRATTGLAVQSHGRAVLVVLPEPH 86

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS- 122
           V  + +            +   L    + LPLL G + +    +     +  +   G   
Sbjct: 87  VNIEAVSFADPSGAL-RIETPMLKGYFQVLPLLLGRLEIASASL--FDAHMVIDLDGRPM 143

Query: 123 ----------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                     +     +       + L  +++  G+  +  + S + + +  +N+ +  R
Sbjct: 144 PSDSAIGRAADARPATAQAARTDAINLGVLNLINGQALLKSRTSPEEHLIKAINVTLDWR 203

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK-AISLKIQLFPLAYPII 231
            L   + L            G+  + ++          P +        I L   A  + 
Sbjct: 204 QLGAAAQLI-----------GSVEYHDQSIDLSAWIAKPVELLRGGPSDITLRLEAPSLS 252

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR--------LSGNFKISDGNV 283
           +   G L   E Q  ++G         + L                  +S N  I + N 
Sbjct: 253 LSTRGRLGS-EPQFHFNGQMEATTPALRDLLALGDRSLPLPGPFNDIVVSANTVIENDNA 311

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
             S   L+    + +  E          + +L+ +        
Sbjct: 312 AFSNLHLEI---DGNRFEGALAMQGLSGKPILSGTLATNLLSL 351


>gi|91785978|ref|YP_546930.1| hypothetical protein Bpro_0065 [Polaromonas sp. JS666]
 gi|91695203|gb|ABE42032.1| hypothetical protein Bpro_0065 [Polaromonas sp. JS666]
          Length = 461

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 53/406 (13%), Positives = 126/406 (31%), Gaps = 50/406 (12%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           +  +     L  ++   AFT+  ++   DFR+  E +A+  +G  + + G + + + P P
Sbjct: 6   KWAVYVSLGLAVLLAAVAFTLHRWVSTDDFRQRVEHEASAALGMPVTLAG-VAVDVWPLP 64

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-------NFY 115
           +V    I +           +E + +R ++ PLL G + +  + + +  L          
Sbjct: 65  AVALTGIVV----QSKPPLTLERVEVRPQWQPLLQGRLAISTLLVRRAVLPQQGIDAVLL 120

Query: 116 LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
              K       ++       +   E   ++G            +  ++ ++   +   + 
Sbjct: 121 ALQKKKQPASAKQGPKPKTPDPAPESAGLEGL------PRRTVLDEVTWISAAGARTTVA 174

Query: 176 IISPLSIDSIKGSVIAE-GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
             + L+ D +  SV  +   GN    R+  +     PA N + +    +    + + +++
Sbjct: 175 AEAALADDGLPDSVSFKLLKGNLQGLRATLQREEPKPADNASKAGDAVVGEDRWALRVEV 234

Query: 235 ---------------FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
                           G      +     G     G         L+A    LSG  + +
Sbjct: 235 GGGKIEGRLALRRAPAGAPVKPGEALALQGQLQTRGVEVSA----LTAPAGALSGQLEAT 290

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE--------NGAESMHDLNET 331
                ++     +     +        V     N L+ ++         G ++  D    
Sbjct: 291 T---SLNARAATTGGLVDALQSHTTFTVRNAVINGLDLAKAVQTVGLSRGGQTRLDTLAG 347

Query: 332 DFFEEE-EKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376
               +    +  N       +  + N       +       N +GD
Sbjct: 348 QVNTQGRAAQLSNLVASSGVLSATGNVAISPAKALSGRVIVNVAGD 393


>gi|265995493|ref|ZP_06108050.1| AsmA family protein [Brucella melitensis bv. 3 str. Ether]
 gi|262766606|gb|EEZ12395.1| AsmA family protein [Brucella melitensis bv. 3 str. Ether]
          Length = 619

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/310 (9%), Positives = 86/310 (27%), Gaps = 31/310 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80
           VP  +     R    ++ +   G  + ++   ++ + P        + +     +     
Sbjct: 2   VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127
              + + +    L  + G I   +  I +PH+N                +S G      R
Sbjct: 62  MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121

Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                +        +         GR+ + D         S+ N+    +  ++ + L  
Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAVNRAGSEPNVPHDKQITDVNATLEW 181

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                +   +G+  +  + + F +T           +  +       P+ +   G    +
Sbjct: 182 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTTNPLSLTFQGKANIS 241

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292
             +  + G  +            L+              L+     +   ++ +  ++ +
Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300

Query: 293 ILPNSSTDED 302
               +    +
Sbjct: 301 NGSPAKGVIE 310


>gi|161619548|ref|YP_001593435.1| AsmA family protein [Brucella canis ATCC 23365]
 gi|260565908|ref|ZP_05836378.1| AsmA protein [Brucella suis bv. 4 str. 40]
 gi|161336359|gb|ABX62664.1| AsmA family protein [Brucella canis ATCC 23365]
 gi|260155426|gb|EEW90506.1| AsmA protein [Brucella suis bv. 4 str. 40]
          Length = 645

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/311 (9%), Positives = 87/311 (27%), Gaps = 31/311 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79
            VP  +     R    ++ +   G  + ++   ++ + P        + +     +    
Sbjct: 27  VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126
               + + +    L  + G I   +  I +PH+N                +S G      
Sbjct: 87  LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146

Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           R     +        +         GR+ + D         S+ N+    +  ++ + L 
Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240
                 +   +G+  +  K + F +T           +  +     A P+ +   G    
Sbjct: 207 WLRTSSAATLKGSAKWRGKATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291
           +  +  + G  +            L+              L+     +   ++ +  ++ 
Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325

Query: 292 SILPNSSTDED 302
           +    +    +
Sbjct: 326 ANGSPAKGVIE 336


>gi|152982123|ref|YP_001352525.1| hypothetical protein mma_0835 [Janthinobacterium sp. Marseille]
 gi|151282200|gb|ABR90610.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 1349

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 106/310 (34%), Gaps = 19/310 (6%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDI 69
           F+F V+ +G   V      +++R D E  AT  +G+ + + G I        P +   ++
Sbjct: 4   FIFCVLFLGLRYVV-LPQISNYRVDVENVATKAIGRPVTI-GSIDASWHGLRPFLSLDNV 61

Query: 70  RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS------- 122
            I  K  G    ++  +S    +  ++  ++R+  + ID+P ++    + G         
Sbjct: 62  AIYDK-GGDVALRLPKVSATVSWWSVMVADLRLHSLEIDKPDMDVERDANGNFYVAGMLI 120

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLNLQISARFLNIISPLS 181
           +  +          +   +I +K G+++  D+        L+D+N+ +     +    L 
Sbjct: 121 DMQKDGDGKAANWILSQREIRIKDGQLRWQDKSRQAPELLLNDVNVVLHNEGRHHQFALK 180

Query: 182 -IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
                  +   +    FD+   + KI+          +        A+   ID    L  
Sbjct: 181 ATPPAAIAAPLDVRAAFDHPYFSKKISDATRWTGTIYTAVRDTELAAWKTYIDFPFELQQ 240

Query: 241 NEKQPIYSGVFSVAG-----DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
            +        F  A          L ++    +K  +      ++G + IS   L +   
Sbjct: 241 AKGSLRAWLSFDHARIADLTADLALSDVSAQLRKDLVPLELTSANGRIAISEP-LDTSPR 299

Query: 296 NSSTDEDNKT 305
           +       + 
Sbjct: 300 DGKPTFGAQG 309


>gi|323700431|ref|ZP_08112343.1| hypothetical protein DND132_3025 [Desulfovibrio sp. ND132]
 gi|323460363|gb|EGB16228.1| hypothetical protein DND132_3025 [Desulfovibrio desulfuricans
           ND132]
          Length = 1235

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/392 (12%), Positives = 108/392 (27%), Gaps = 31/392 (7%)

Query: 1   MLRRV-LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           +LRR+    L       L G F VP        +     Q    + ++ ++     I   
Sbjct: 14  LLRRIVFWLLTAFVVYTLFGFFAVPPI-----LKSVLVSQIKENLKREASLG---DIRFN 65

Query: 60  P-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
           P    +   D+ I   ++      +  L +      +      V  + +D  ++N     
Sbjct: 66  PLNFHLEASDLHIKNLKEEGDLLSLGHLEVAPGASSIWKLAPVVSYLKLDGLNVNVTFYG 125

Query: 119 KGVSNWF-------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
            G  +                +      I    L  + +    I   D+   + + ++D+
Sbjct: 126 NGKYSVSDLLGTPDSVNQEQPKPEEKGAIFPFALYGLELTNSMITFDDRPRGKKHVIADI 185

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGT-GNFDNKRSAFKITANFPAKNKAISLKIQLF 224
           +L++                  + +  G       +   F  T     +  A+ + +Q +
Sbjct: 186 HLRVPFTSSIAKDVKEFTQPVFTAVVNGDPVELKGRTLPFDKTLRTEFELGAVDVDLQQY 245

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
               PI   L   L         S  F         L L      + L            
Sbjct: 246 WKYMPIKTPLE--LKSGRFTSDISLFFERPEAQRINLYLGGGGTLTDLELTAPGDGPVFS 303

Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344
           + +   +    +   +     +VS  +            +  ++N T +F   E      
Sbjct: 304 MKKLAFEMERFSLGDNALVVKRVSMSQ-PFFKV---VRRADGEINWTGYFPGSEPGPTGP 359

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376
            +K +    +     +  N   K+   +FS  
Sbjct: 360 KVKTEADTNAAFV-FDLRNFEIKDGTVDFSDQ 390


>gi|221214439|ref|ZP_03587410.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
 gi|221165696|gb|EED98171.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
          Length = 1377

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/332 (13%), Positives = 97/332 (29%), Gaps = 37/332 (11%)

Query: 1   MLRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGI 54
           MLRRV      +      V       +   +     +FR   ER  +  +  ++++ G +
Sbjct: 1   MLRRVFKVTLAVAIGTYFVACGTFLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GKL 59

Query: 55  KIHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113
             H     P V    + I  ++       +   +    ++ LL     +  + +D+P L 
Sbjct: 60  SPHWSGMQPGVEVTHLTIRGRDG-QVALSVPHATAALSWMSLLRLSPALSSLIVDEPDLV 118

Query: 114 FYLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDL 165
              ++ G  +            +       +  E I ++GG ++  D + D     LS +
Sbjct: 119 VARAADGSLSIAGVGVASAHGGNDTFGTWLLKQEAIVLRGGTLRWRDAQHDAPELALSGI 178

Query: 166 NLQISARFLNIISPLSIDSIK----GSVIAEGTGN---FDNKRSAFKITANFPAKNKAIS 218
            L +        + L   +      G +                    T N       + 
Sbjct: 179 RLAVLNDGRLHKAALQAPANGTLLLGPLDFRARFTHKALAPIGKPSNWTGNAYLSTGPVD 238

Query: 219 LKIQLFPLAYPI-----IIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKK 269
           L+     +  P+      ID      ++  +   +G   + G    L        L    
Sbjct: 239 LQTLARYVDMPLTIHAGRIDNAIWATFSNGRLRSAGG-DLQGADVALRVRPTQPRLDVPT 297

Query: 270 SRLSGNFKISDGN---VRISRYKLQSILPNSS 298
                +  +  G    + ++ +  +   P   
Sbjct: 298 VGFRWDLALDPGRDYTLHLTHFNAELGQPPLP 329


>gi|23502471|ref|NP_698598.1| AsmA family protein [Brucella suis 1330]
 gi|23348463|gb|AAN30513.1| AsmA family protein [Brucella suis 1330]
          Length = 645

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/311 (9%), Positives = 87/311 (27%), Gaps = 31/311 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79
            VP  +     R    ++ +   G  + ++   ++ + P        + +     +    
Sbjct: 27  VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126
               + + +    L  + G I   +  I +PH+N                +S G      
Sbjct: 87  LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146

Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           R     +        +         GR+ + D         S+ N+    +  ++ + L 
Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240
                 +   +G+  +  K + F +T           +  +     A P+ +   G    
Sbjct: 207 WLRTSSAATLKGSAKWRGKATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291
           +  +  + G  +            L+              L+     +   ++ +  ++ 
Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325

Query: 292 SILPNSSTDED 302
           +    +    +
Sbjct: 326 ANGSPAKGVIE 336


>gi|108757458|ref|YP_628465.1| asmA family protein [Myxococcus xanthus DK 1622]
 gi|108461338|gb|ABF86523.1| asmA family protein [Myxococcus xanthus DK 1622]
          Length = 900

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/367 (12%), Positives = 127/367 (34%), Gaps = 49/367 (13%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQA--TLIVGKKIAVKGGIKIHILP 60
           RR    LG +F+++++        +D    +   ++ A  + ++G+ I + G I   + P
Sbjct: 10  RRWPYVLGGVFALLVIIVAVALWRLDAILLKTARDQAATYSQLLGRPIEI-GDISTKLFP 68

Query: 61  FPSVFFKDIRIDQKEDGS-FESKIEGLSMRAEFLPLLS---GEIRVFDMYIDQPHLNFYL 116
                 +++ +   E      +++  + +R    PLLS    +I+V +  +    +N   
Sbjct: 69  TIGAQVENVTVGPAEGEDLPLAQLALIDVRVAAGPLLSSSGKDIQVKNAEVSGLTVNLVR 128

Query: 117 SSKGVSNWF-----------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159
            + G +N                     +S    +  V +E+  +  G I+ +D+ + + 
Sbjct: 129 FADGTTNVQRLLQRLEEQQPKEEEAPAEESQPMDLSGVHVERAALTDGAIRFVDRGAGEQ 188

Query: 160 YF---LSDLNLQISARFLNIISPLSIDS--IKGSVIAEGTGNFDNKRSAF---------- 204
                + DL++++    +     +++ +  +  +   + + +     +            
Sbjct: 189 ARELGVKDLDIEVKDLRVGKPLVVNLAAAVLADTQNLQVSLHAAPLPATLVPTPERVTLK 248

Query: 205 --KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF---SK 259
             KI            + ++   L      DL G +   +      G+    G     S+
Sbjct: 249 AQKIDLAPLGPFLPPDIGLRAGTLDADWQADLGGAVPGGQGPTKLVGIIKALGLSFTGSE 308

Query: 260 LLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN-FS 318
                     + ++G+   + G++ +++ K+      +S       K    ++  +  F 
Sbjct: 309 GGKALDVVMDTDVAGDI--NTGDLALNKLKVDLGP--ASLTGKGSVKGLLTDKPAVEGFE 364

Query: 319 ENGAESM 325
             G    
Sbjct: 365 LTGRNLD 371


>gi|319403714|emb|CBI77299.1| AsmA family [Bartonella rochalimae ATCC BAA-1498]
          Length = 630

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 48/386 (12%), Positives = 111/386 (28%), Gaps = 64/386 (16%)

Query: 1   MLRRVLIGLGFLFSVVL----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           M  +++  L  +F  ++         VP  +     R    +  ++  G  + ++   K+
Sbjct: 1   MRIKIIKFLSGIFIAIVFLVGAAVIIVPYIVSTDAIRIRLAQDLSVWTGYSVQLRDLPKL 60

Query: 57  HILPFPSVFFKDIRI-----DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111
            I P+P  F   + +           +   ++E + +    + LL G I   +  I  P 
Sbjct: 61  KIFPYPKAFLSGVTLTPKMESAASLAAPLMEVESIEVDLSLISLLWGRISFSETRIMYPK 120

Query: 112 LNFYLSSKGVSNWFQRKSTMDMIHNVIL------------------------EKIHVKGG 147
                 +K +S++F           + +                         +I ++ G
Sbjct: 121 FIMDKPAKTISDFFDTLLRSQGAFGLAIQSAREIIKRNPDNPDVASLLNQPFGRIVIENG 180

Query: 148 RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207
            +   D  S  +  ++ LN           + +    +  ++       +  + +   I 
Sbjct: 181 TLMYRDDASVVMEQITGLN-----------ASIDWPGLTQAMQFRAKARWHGELTELFIN 229

Query: 208 ANFP---AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE 264
           A+           SL++    +   I       L    +  I+ G  S+           
Sbjct: 230 ADQALLLLAGGKSSLQVSFNSVRGGITFKGQARLS---EYYIFDGKVSLRSPGWDQTVAW 286

Query: 265 LSA---------KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE-ENL 314
           +                  +F     +VR+S         N+        +        +
Sbjct: 287 IGGNQLWGHGLKMPIVWESDFLAQPAHVRMSNVIFTMGTANA----RGALEFDFKNHVPV 342

Query: 315 LNFSENGAESMHDLNETDFFEEEEKK 340
           L  S    +   D+ +   F  E+K 
Sbjct: 343 LMGSLGFDKLDFDILKLLLFCSEQKN 368


>gi|265984642|ref|ZP_06097377.1| AsmA family protein [Brucella sp. 83/13]
 gi|264663234|gb|EEZ33495.1| AsmA family protein [Brucella sp. 83/13]
          Length = 619

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/310 (9%), Positives = 85/310 (27%), Gaps = 31/310 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80
           VP  +     R    ++ +   G  + ++   ++ + P        + +     +     
Sbjct: 2   VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127
              + + +    L  + G I   +  I +PH+N                +S G      R
Sbjct: 62  MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121

Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                +        +         GR+ + D         S+ N+    +  ++ + L  
Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                +   +G+  +  + + F +T           +  +     A P+ +   G     
Sbjct: 182 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI- 240

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292
                + G  +            L+              L+     +   ++ +  ++ +
Sbjct: 241 SGDRFFEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300

Query: 293 ILPNSSTDED 302
               +    +
Sbjct: 301 NGSPAKGVIE 310


>gi|256370021|ref|YP_003107532.1| AsmA family protein [Brucella microti CCM 4915]
 gi|256000184|gb|ACU48583.1| AsmA family protein [Brucella microti CCM 4915]
          Length = 645

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/311 (9%), Positives = 87/311 (27%), Gaps = 31/311 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79
            VP  +     R    ++ +   G  + ++   ++ + P        + +     +    
Sbjct: 27  VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126
               + + +    L  + G I   +  I +PH+N                +S G      
Sbjct: 87  LMSTDRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146

Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           R     +        +         GR+ + D         S+ N+    +  ++ + L 
Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240
                 +   +G+  +  + + F +T           +  +     A P+ +   G    
Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291
           +  +  + G  +            L+              L+     +   ++ +  ++ 
Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325

Query: 292 SILPNSSTDED 302
           +    +    +
Sbjct: 326 ANGSPAKGVIE 336


>gi|261325662|ref|ZP_05964859.1| AsmA family protein [Brucella neotomae 5K33]
 gi|261301642|gb|EEY05139.1| AsmA family protein [Brucella neotomae 5K33]
          Length = 619

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/310 (9%), Positives = 87/310 (28%), Gaps = 31/310 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80
           VP  +     R    ++ +   G  + ++   ++ + P        + +     +     
Sbjct: 2   VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127
              + + +    L  + G I   +  I +PH+N                +S G      R
Sbjct: 62  MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121

Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                +        +         GR+ + D         S+ N+    +  ++ + L  
Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                +   +G+  +  + + F +T           +  +     A P+ +   G    +
Sbjct: 182 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 241

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292
             +  + G  +            L+              L+     +   ++ +  ++ +
Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300

Query: 293 ILPNSSTDED 302
               +    +
Sbjct: 301 NGSPAKGVIE 310


>gi|217970306|ref|YP_002355540.1| hypothetical protein Tmz1t_1893 [Thauera sp. MZ1T]
 gi|217507633|gb|ACK54644.1| protein of unknown function DUF748 [Thauera sp. MZ1T]
          Length = 1266

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 100/298 (33%), Gaps = 32/298 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LRR L  +  L ++       VP        R   ++     +G+++ V+   ++ I PF
Sbjct: 18  LRRTLWTVAILLALSAAAYLAVPPV-----ARHYAQKLLGETLGREVVVE---RVLINPF 69

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             +     +RI + +  +     E L    E   LL   I + ++ +D+P ++  L ++G
Sbjct: 70  RLTAEVGGLRIMEADGSAEALGFESLRANLELESLLRKGIVLHELALDKPRVHVALEAEG 129

Query: 121 VSNWFQ-----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
             NW               +         +  I +  G +++ D+     + LS+L + +
Sbjct: 130 RHNWTDVLERIAALGGEEPAEDTPPTLFSIGNIRISDGLVRVDDRVRGITHELSELGVGV 189

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
                    P+ +D          +   +             A+++   L + L      
Sbjct: 190 PFVS---NLPVRVDVFVQP---SLSAKLNGDALLLNARTKPFAESQETILDVSLK----- 238

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
              DL   + +   +P +    ++     +L   +       LS    +    + +  
Sbjct: 239 -EFDLTPWIAYLPIEPRFRLPSALLTTNLELSFSQTVEGAPVLSLRGPLQVHKLVLQD 295



 Score = 39.5 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 6/82 (7%), Positives = 26/82 (31%), Gaps = 3/82 (3%)

Query: 44  VGKKIAVKGGIKIHILPFPS--VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIR 101
              +++    ++   +      +    + +  +E     +  + + +    +  + G   
Sbjct: 264 TNLELSFSQTVEGAPVLSLRGPLQVHKLVLQDREGA-PVATADEVELEFADVQPMIGRWH 322

Query: 102 VFDMYIDQPHLNFYLSSKGVSN 123
              + + +P L+      G  N
Sbjct: 323 FTRLRLARPELDLVRLKDGGLN 344


>gi|265991655|ref|ZP_06104212.1| AsmA family protein [Brucella melitensis bv. 1 str. Rev.1]
 gi|263002439|gb|EEZ15014.1| AsmA family protein [Brucella melitensis bv. 1 str. Rev.1]
          Length = 619

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/310 (9%), Positives = 87/310 (28%), Gaps = 31/310 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80
           VP  +     R    ++ +   G  + ++   ++ + P        + +     +     
Sbjct: 2   VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127
              + + +    L  + G I   +  I +PH+N                +S G      R
Sbjct: 62  MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121

Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                +        +         GR+ + D         S+ N+    +  ++ + L  
Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                +   +G+  +  + + F +T           +  +     A P+ +   G    +
Sbjct: 182 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 241

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292
             +  + G  +            L+              L+     +   ++ +  ++ +
Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300

Query: 293 ILPNSSTDED 302
               +    +
Sbjct: 301 NGSPAKGVIE 310


>gi|312112905|ref|YP_004010501.1| hypothetical protein Rvan_0112 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311218034|gb|ADP69402.1| hypothetical protein Rvan_0112 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 601

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 89/275 (32%), Gaps = 7/275 (2%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED 76
           +  A  VP F D    R+ F +  +   G K+ + G ++I      SV   D+R      
Sbjct: 45  VFFAVAVPRFFDGDVARKSFVKALSAWSGGKVTLAGQLRIASFATLSVEASDVRFHDAPG 104

Query: 77  GSFE--SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134
                    E ++       LL G++      +  P       + G +      + + + 
Sbjct: 105 LDPVQRGSAETVTAVVNLSSLLLGDLEYRKFVVSSPRFVLKRDAGGRAADELAAARLALT 164

Query: 135 --HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE 192
                 L  I ++     I D        ++   + +        +P ++   K      
Sbjct: 165 LVDRSSLPDIQLRDPVFYIADGALRPYRRVAFERITLKRPDSAAAAPFALSMRKPGFELA 224

Query: 193 GTGNFDNKRSAFKITANFPAKN-KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
             G  + ++ + ++       +  A  L   L P        L G+L W+ ++       
Sbjct: 225 FKGERNGQKVSGQLKLVAAGDHPLAAHLIAALAPWETATGFSLEGDLTWSRERFSLDNAS 284

Query: 252 SVAGDFSKL--LNLELSAKKSRLSGNFKISDGNVR 284
              GD +    L L++S   +RL G       +V 
Sbjct: 285 LSFGDRTATGVLALDVSDDPARLEGTLAYDTLDVT 319


>gi|261219727|ref|ZP_05934008.1| AsmA family protein [Brucella ceti M13/05/1]
 gi|261222741|ref|ZP_05937022.1| AsmA family protein [Brucella ceti B1/94]
 gi|261318210|ref|ZP_05957407.1| AsmA family protein [Brucella pinnipedialis B2/94]
 gi|261322617|ref|ZP_05961814.1| AsmA family protein [Brucella ceti M644/93/1]
 gi|265989242|ref|ZP_06101799.1| AsmA family protein [Brucella pinnipedialis M292/94/1]
 gi|265998703|ref|ZP_06111260.1| AsmA family protein [Brucella ceti M490/95/1]
 gi|260921325|gb|EEX87978.1| AsmA family protein [Brucella ceti B1/94]
 gi|260924816|gb|EEX91384.1| AsmA family protein [Brucella ceti M13/05/1]
 gi|261295307|gb|EEX98803.1| AsmA family protein [Brucella ceti M644/93/1]
 gi|261297433|gb|EEY00930.1| AsmA family protein [Brucella pinnipedialis B2/94]
 gi|262553327|gb|EEZ09161.1| AsmA family protein [Brucella ceti M490/95/1]
 gi|264661439|gb|EEZ31700.1| AsmA family protein [Brucella pinnipedialis M292/94/1]
          Length = 619

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/310 (9%), Positives = 87/310 (28%), Gaps = 31/310 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80
           VP  +     R    ++ +   G  + ++   ++ + P        + +     +     
Sbjct: 2   VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127
              + + +    L  + G I   +  I +PH+N                +S G      R
Sbjct: 62  MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121

Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                +        +         GR+ + D         S+ N+    +  ++ + L  
Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                +   +G+  +  + + F +T           +  +     A P+ +   G    +
Sbjct: 182 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 241

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292
             +  + G  +            L+              L+     +   ++ +  ++ +
Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300

Query: 293 ILPNSSTDED 302
               +    +
Sbjct: 301 NGSPAKGVIE 310


>gi|116623043|ref|YP_825199.1| hypothetical protein Acid_3947 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226205|gb|ABJ84914.1| protein of unknown function DUF490 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 1605

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 51/376 (13%), Positives = 114/376 (30%), Gaps = 31/376 (8%)

Query: 3   RRVLIGLGF-LFSVVLVGAFTVPLFIDWTDFREDFERQ----ATLIVGKKIAVKGGIKIH 57
           R++   +G  +  +VLV        +    FR+    +         G K+ +       
Sbjct: 5   RKIAAIVGGSILGLVLVVFLAGIAIVRTEWFRDMVRSKLVTVVENATGGKVEIG---SFA 61

Query: 58  I-LPFPSVFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
                     +D  I   +    +   + + L +  + L    G + + ++ +D P  N 
Sbjct: 62  FDWTHLRAQVRDFVIHGLEPAGAAPLLRADLLQVDLKLLSPFKGFVDIANLLVDTPQANV 121

Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKI-HVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
            + + G +N    K          +E I  +  G  ++ +         ++LN       
Sbjct: 122 IIFADGRTNVPNPKVQPKSSDKTAVETIVDLAIGHFELRNGSFTFAERKTELNANGEKLR 181

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
             +           +V    TG  D      K  AN PA +  + L + +      +   
Sbjct: 182 AMLYYS--------AVNPRYTGQIDIAPLHVKAGAN-PAVDINVKLPLTMEKDKISLSA- 231

Query: 234 LFGNLFWNEKQPIYSGVFSVAGD--FSKLLNLELSAKKSRLSGNFKISDGNVRISRY--K 289
               +   E + + +G          +  L  +++  + +      +    V   R    
Sbjct: 232 --AEITTPESRLVITGAMEHLTAPRTNVHLKAQIALDEVKRVAGLTLPLDTVHAPRMLDA 289

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349
             +   N S       ++S  + N       G  +    N +    E  +  K     + 
Sbjct: 290 EITGSMNESRIALQDARLSIGKTN---LEATGTLAALQFNTSIALGEVGRLFKVSARPEG 346

Query: 350 DIQYSVNKKEEKDNSH 365
            +Q   N   + +N++
Sbjct: 347 TLQAGGNLTLDANNNY 362


>gi|148252159|ref|YP_001236744.1| putative AsmA-like protein [Bradyrhizobium sp. BTAi1]
 gi|146404332|gb|ABQ32838.1| putative AsmA-like protein [Bradyrhizobium sp. BTAi1]
          Length = 705

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 97/288 (33%), Gaps = 25/288 (8%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAE 91
              + +     G ++++ G   I + P       DI +   +  DG+    +  L     
Sbjct: 33  AAIQDRVERDTGYRLSIAGSASISLWPSLHATLTDITLLDPKDRDGNNRLTVAKLQADMA 92

Query: 92  FLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR---KSTMDMIHNVILEKIHVKGGR 148
              L SG   + ++ +D+P L   L  + + +   R    +  D   ++ +E++ ++ G 
Sbjct: 93  LSGLWSGRPDIAEVIVDKPTLYLPLLRERLRDNAPRNRAPAKSDAAPSIRIERVTIRDGA 152

Query: 149 IKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208
           + + +        +  +               +     G +   GT    ++  +F++ +
Sbjct: 153 VILSNPRDRVENRIDGI------------GATASLGGDGRIKLTGTARASDRPVSFEVNS 200

Query: 209 ---NFPAKNKAISLKIQLFP-LAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLLNL 263
                P   + + ++ +L    A+  ++    +L  N    + +G   ++ G        
Sbjct: 201 TAPGMPIDRQTLPVEFKLEMADAFRGVLAGRADLRLNGPLVMINGLSGTLGGGDFNGWAS 260

Query: 264 ELSAKKSRLSGNFK---ISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308
              A K  +  +     +  G+    R    S    ++ D      V 
Sbjct: 261 VDVASKPLVKLDLDVRRLDLGSPAAPRNAGASGWSTAAIDLRGLNYVD 308


>gi|319406722|emb|CBI80355.1| AsmA family [Bartonella sp. 1-1C]
          Length = 630

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/377 (11%), Positives = 111/377 (29%), Gaps = 58/377 (15%)

Query: 1   MLRRVLIGLGFLFSVVL----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           M  +++  L  +F  ++         VP  +     R    +  ++  G  + ++   ++
Sbjct: 1   MRIKIIKFLSGIFIAIVFLVGAAVIIVPYIVSTDAIRIRLAQDLSVWTGYSVQLRDPPRL 60

Query: 57  HILPFPSVFFKDIRID-----QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111
            I P+P  F   + +           +   ++E + +    + LL G I   +  I  P 
Sbjct: 61  KIFPYPKAFLSGVTLTPKMEIAASLAAPLMEVESIEVDLSLVSLLWGRISFSETRIMYPK 120

Query: 112 LNFYLSSKGVSNWFQRKSTMDMIHNVIL------------------------EKIHVKGG 147
                  K +S++F   S       + +                         +I ++ G
Sbjct: 121 FIMDKPVKTISDFFDTLSRSQGAFGLAIQSAREIIKHNPDNPDVASLLNQPFGRIVIENG 180

Query: 148 RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207
            +   D  S  +  ++ LN           + +    +  ++      ++  + +   I 
Sbjct: 181 TLMYRDGSSVVMEQITGLN-----------ASIDWPRLTQAMQFRAKAHWHGELTELFIN 229

Query: 208 ANFPA-------KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL 260
           A+           +  +S       + +     L     ++ K  + S  +     +   
Sbjct: 230 ADQALLLLAGGKSSLQVSFNSVRGGITFKGHARLSEYYIFDGKISLCSPSWDQTVAWIGG 289

Query: 261 LNLELSAKKSRL--SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE-ENLLNF 317
                   K  +    +F     +VR+S         N+        +        +L  
Sbjct: 290 NQFWGHGLKIPIVWESDFLAQPAHVRMSNVIFTMGTANA----RGALEFDFKNHVPVLMG 345

Query: 318 SENGAESMHDLNETDFF 334
           S    +   D+ +  FF
Sbjct: 346 SLGFDKLDFDILKFLFF 362


>gi|86141820|ref|ZP_01060344.1| outer membrane assembly protein [Leeuwenhoekiella blandensis
           MED217]
 gi|85831383|gb|EAQ49839.1| outer membrane assembly protein [Leeuwenhoekiella blandensis
           MED217]
          Length = 891

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 94/299 (31%), Gaps = 32/299 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI 58
           ++++   +G +  V++VG    P       FR   E      + + I          + +
Sbjct: 1   MKKIFKIIGIVLLVLIVGLIAAPFL-----FRGPLEDLLKRSINENINATVAWEDFDLTL 55

Query: 59  ---LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLS----GEIRVFDMYIDQ 109
               P  +V   +  +       G   +    L +    + L        I +  + +D 
Sbjct: 56  FSSFPDAAVKVNNFTVVNNAPFAGDTLASGAVLQLDMGVMQLFKTSSGEPIAIDAIRLDD 115

Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIH------------NVILEKIHVKGGRIKIIDQESD 157
            ++N  + S G +N+   K   +                  ++   +   RI  +D+ + 
Sbjct: 116 AYVNIKVDSLGNANYDIAKENPNATATADTLADSSGGFRFAVQHYELNNSRINYLDESTQ 175

Query: 158 QVYFLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKA 216
               LS++N +    F   IS L+  +    S   +G    +N + +           + 
Sbjct: 176 TFLRLSEVNHEGDGDFSAAISNLNTKTEALASFDLDGVNYLNNNKLSLDAVIEMNLDEQR 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSG 274
            + K +   L   + +   G +  NE        F     DF   L +        L G
Sbjct: 236 YTFK-ENEALVNQLPLVFEGFVQINEANNELDLSFETPTSDFKNFLGVIPEVYAKNLDG 293


>gi|241765469|ref|ZP_04763436.1| AsmA family protein [Acidovorax delafieldii 2AN]
 gi|241364779|gb|EER59768.1| AsmA family protein [Acidovorax delafieldii 2AN]
          Length = 388

 Score = 86.9 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 63/238 (26%), Gaps = 26/238 (10%)

Query: 74  KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM 133
            +  +  + +   S     LPLLS  +    + +  P +       G +NW     T   
Sbjct: 143 TDQTAPMATVASASATLHLLPLLSRHLAFDTVVLSAPDVALERHMDGRNNWTFTPRTPRN 202

Query: 134 ----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189
                    +++  V+ GR+  +D        L  L L           P S    +  V
Sbjct: 203 DGRAPWQFTVDQFAVRQGRLAYVDP-------LRKLQLAARI----HTLPPSQADGRYGV 251

Query: 190 IAEGTGNFDNKRSAFKITANFP--AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
             E  G F   R      A      +++ ++  +Q    A  +   + G L         
Sbjct: 252 HFEVEGRFAKARIEGSGKAGPLLSLRDRIVNYPLQFEARAGSVATSVEGTLANPRALKGM 311

Query: 248 SGVFSVAGDFSKLLNLELSAKKSR---------LSGNFKISDGNVRISRYKLQSILPN 296
                +       L                   L G+ +        S +       +
Sbjct: 312 DLQVMLQASSMADLYELTGLVLPNTPPFRTRGHLRGSLEPGHAVWDYSDFAGTVGESD 369



 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 6/66 (9%), Positives = 17/66 (25%), Gaps = 13/66 (19%)

Query: 27 IDWTDFREDFERQATLIVGKKIAVKGGIKI-------------HILPFPSVFFKDIRIDQ 73
           DW   +     + +   G+   + G +                 +P  ++  + I +  
Sbjct: 25 FDWNRAKPWISERVSESAGRSFEIAGNLNATWHWPDPLAEGWRRWIPGITLQAERITLGN 84

Query: 74 KEDGSF 79
                
Sbjct: 85 PPGFGT 90


>gi|62290488|ref|YP_222281.1| AsmA family protein [Brucella abortus bv. 1 str. 9-941]
 gi|82700411|ref|YP_414985.1| AsmA [Brucella melitensis biovar Abortus 2308]
 gi|189024712|ref|YP_001935480.1| AsmA [Brucella abortus S19]
 gi|254697931|ref|ZP_05159759.1| AsmA [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730821|ref|ZP_05189399.1| AsmA [Brucella abortus bv. 4 str. 292]
 gi|260547016|ref|ZP_05822755.1| AsmA protein [Brucella abortus NCTC 8038]
 gi|62196620|gb|AAX74920.1| AsmA family protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616512|emb|CAJ11579.1| AsmA [Brucella melitensis biovar Abortus 2308]
 gi|189020284|gb|ACD73006.1| AsmA [Brucella abortus S19]
 gi|260096066|gb|EEW79943.1| AsmA protein [Brucella abortus NCTC 8038]
          Length = 645

 Score = 86.9 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/311 (9%), Positives = 86/311 (27%), Gaps = 31/311 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79
            VP  +     R    ++ +   G  + ++   ++ + P        + +     +    
Sbjct: 27  VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126
               + + +    L  + G I   +  I +PH+N                +S G      
Sbjct: 87  LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146

Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           R     +        +         GR+ + D         S+ N+    +  ++ + L 
Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240
                 +   +G+  +  + + F +T           +  +     A P+ +   G    
Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291
           +  +  + G  +            L+              L+     +   ++ +  ++ 
Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325

Query: 292 SILPNSSTDED 302
           +         +
Sbjct: 326 ANGSPVKGVIE 336


>gi|254708266|ref|ZP_05170094.1| AsmA [Brucella pinnipedialis M163/99/10]
          Length = 645

 Score = 86.9 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/311 (9%), Positives = 86/311 (27%), Gaps = 31/311 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79
            VP  +     R    ++ +   G  + ++   ++ + P        + +     +    
Sbjct: 27  VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126
               + + +    L  + G I   +  I +PH+N                +S G      
Sbjct: 87  LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146

Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           R     +        +         GR+ + D         S+ N+    +  ++ + L 
Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240
                 +   +G+  +  + + F +T           +  +     A P+ +   G    
Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291
           +  +  + G  +            L+              L+     +   ++ +  ++ 
Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325

Query: 292 SILPNSSTDED 302
           +         +
Sbjct: 326 ANGSPVKGVIE 336


>gi|261755548|ref|ZP_05999257.1| AsmA family protein [Brucella suis bv. 3 str. 686]
 gi|261745301|gb|EEY33227.1| AsmA family protein [Brucella suis bv. 3 str. 686]
          Length = 619

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 31/310 (10%), Positives = 87/310 (28%), Gaps = 31/310 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80
           VP  +     R    ++ +   G  + ++   ++ + P        + +     +     
Sbjct: 2   VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127
              + + +    L  + G I   +  I +PH+N                +S G      R
Sbjct: 62  MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121

Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                +        +         GR+ + D         S+ N+    +  ++ + L  
Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                +   +G+  +  K + F +T           +  +     A P+ +   G    +
Sbjct: 182 LRTSSAATLKGSAKWRGKATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 241

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292
             +  + G  +            L+              L+     +   ++ +  ++ +
Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300

Query: 293 ILPNSSTDED 302
               +    +
Sbjct: 301 NGSPAKGVIE 310


>gi|213027293|ref|ZP_03341740.1| putative assembly protein [Salmonella enterica subsp. enterica
          serovar Typhi str. 404ty]
          Length = 95

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 37/94 (39%)

Query: 2  LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
          +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1  MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62 PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95
           S+    + +  +       + + + +       
Sbjct: 61 LSILSGRMTLTARGASEPLVRADNMRLDVALGRF 94


>gi|253699185|ref|YP_003020374.1| hypothetical protein GM21_0539 [Geobacter sp. M21]
 gi|251774035|gb|ACT16616.1| protein of unknown function DUF748 [Geobacter sp. M21]
          Length = 1208

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 46/325 (14%), Positives = 95/325 (29%), Gaps = 33/325 (10%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKE 75
           +     +P+ +     R           G+++ +     + I PF  +V  +D+ I +K 
Sbjct: 20  VFVTAVLPIIV-----RNKTVSALKEATGREVRLS---SVSINPFTLTVTMRDLAIAEKT 71

Query: 76  DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--------R 127
                              +      + ++ +D P ++   S+    N+           
Sbjct: 72  G-PPLVAFREAKASLALASIYKRAFILSELALDTPSVSLVRSAPNRFNFSDIIDRQPKGE 130

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
           K          L  I VK G +   D+     + + + DL + I                
Sbjct: 131 KPEQGKPLLFSLNNIIVKNGSVDFDDRMTAGGRKHAVRDLQISIPFISNIPYLADRY--- 187

Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
              V        +    +F       +K+   S+ I L  L+ P  +             
Sbjct: 188 ---VDPRLAAVVNGAPFSFAGKLKPLSKSLETSVHIGLKGLSLPQYL---AYAPAPPPVD 241

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
           + SG  ++      L     + KK  L          VR+++   + +L   S +     
Sbjct: 242 LTSGRLTL---DMDLAYRVSAEKKPELILKGGAGLAMVRVNQLDGKPLLRLPSLELKADR 298

Query: 306 KVSQDEENLL-NFSENGAESMHDLN 329
                +     + + NG E   D +
Sbjct: 299 LEVLAKSFAFGSIALNGLELFVDRD 323


>gi|325266490|ref|ZP_08133167.1| AsmA family protein [Kingella denitrificans ATCC 33394]
 gi|324981933|gb|EGC17568.1| AsmA family protein [Kingella denitrificans ATCC 33394]
          Length = 715

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/334 (11%), Positives = 98/334 (29%), Gaps = 18/334 (5%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           ++  G+  L    L    ++  F +     +          G ++     I+  + P P+
Sbjct: 15  KLAYGILSLVLAYLGAYASLYRFANHDVLSQRANSAM-QKTGYRVTFDKNIQRSLFPRPT 73

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
           V  ++ R+   +  +    I  + +   +  +  G+  +  + ++      Y ++K   N
Sbjct: 74  VTIRNARLQTPQGETD-LTIGEVRVGMAWSSIF-GQPEIEKLVLNHAEGTVYRTAKNEWN 131

Query: 124 WF-QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                             +I +   R+ I        + L ++ LQ+          +  
Sbjct: 132 VASWLPQEEGGEPIPSFNRIMMNESRLNIT--YGAHHFSLQNIQLQVYPANNGHAYRIQA 189

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242
           D+           ++  + +AF    +    +  I L+       Y     L   + W  
Sbjct: 190 DTPHADWQ---NLHWQAQGTAFLQQGSLHLPD--IRLQFNGKAQDYTFTGSLQSAIQW-- 242

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
           +    S          +     LSA   +L+   K  +    +            +    
Sbjct: 243 QHEQLSAKNIRITADGEQYQTHLSATIDQLTHRHK--EQQTLLKNLTATVNTATDNRQIR 300

Query: 303 NKTKVSQDEENLLNFSENGAESMHD---LNETDF 333
              + +Q + +      +  +   +   LN T  
Sbjct: 301 GTLRTAQAQFDEQRAHSDEIQLNLNHSRLNNTPI 334


>gi|225628040|ref|ZP_03786076.1| AsmA family protein [Brucella ceti str. Cudo]
 gi|225617203|gb|EEH14249.1| AsmA family protein [Brucella ceti str. Cudo]
          Length = 646

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/309 (9%), Positives = 86/309 (27%), Gaps = 31/309 (10%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFES 81
           P  +     R    ++ +   G  + ++   ++ + P        + +     +      
Sbjct: 30  PFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPLM 89

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQRK 128
             + + +    L  + G I   +  I +PH+N                +S G      R 
Sbjct: 90  SADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIRA 149

Query: 129 STMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
               +        +         GR+ + D         S+ N+    +  ++ + L   
Sbjct: 150 QRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEWP 209

Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWNE 242
               +   +G+  +  + + F +T           +  +     A P+ +   G    + 
Sbjct: 210 RTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANISR 269

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSI 293
            +  + G  +            L+              L+     +   ++ +  ++ + 
Sbjct: 270 DRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTAN 328

Query: 294 LPNSSTDED 302
              +    +
Sbjct: 329 GSPAKGVIE 337


>gi|212703704|ref|ZP_03311832.1| hypothetical protein DESPIG_01751 [Desulfovibrio piger ATCC 29098]
 gi|212672856|gb|EEB33339.1| hypothetical protein DESPIG_01751 [Desulfovibrio piger ATCC 29098]
          Length = 666

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 50/301 (16%), Positives = 98/301 (32%), Gaps = 27/301 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++RVL  +G +  V+      V   +D                G  +      ++ +LP 
Sbjct: 1   MKRVLCWIGGIVLVLAAVLAIVISQLDTEFISGQISAAVEKATGTPVRFASPPELSLLP- 59

Query: 62  PSVFFKDIRIDQKEDGSFE-SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           P   F  +  D  +DG        G     E  PLL GE+ + ++ +D P L+  L  +G
Sbjct: 60  PGAKFASVSWDGVQDGQGMRFTARGGEAHLELEPLLHGELVIGEVRLDSPSLS-LLLPEG 118

Query: 121 VSNWFQR---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
            +              K   +++  + L ++ +  G + +  ++  + Y L D+NL +  
Sbjct: 119 KAAAPAGVASGKVAGNKPGSEVLLPLELGRLTLSKGSLHV--EKGGERYDLRDINLSVEN 176

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
                 + L           + T +          T    A+     +  ++  L+  I 
Sbjct: 177 LRNGQDAVLRC---------DFTYDLLTAGRTLAGTLALDAQAGLFGMAPRVQNLSLTIT 227

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDF----SKLLNLELSAKKSRLSGNFKISDGNVRISR 287
               G L          G  S+           L+L +   +  L+G   +       S 
Sbjct: 228 PSRRGLLPAGLGPVQLQGDASLDTAARQLHLSRLSLSVPHGRVGLTGTLGLDGPTFTGSA 287

Query: 288 Y 288
            
Sbjct: 288 L 288


>gi|300310753|ref|YP_003774845.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
 gi|300073538|gb|ADJ62937.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
          Length = 1439

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 93/307 (30%), Gaps = 30/307 (9%)

Query: 9   LGFLFSVVLVGAFTVPLFI---------DWTDFREDFERQATLIVGKKIAVKGGIKIHI- 58
           LGF   ++L G F               +   ++   ER  +  +G+ +++   I     
Sbjct: 37  LGFTVKLLLAGYFIFCALFLVLRYAVLPEIGHYKPQIERLVSAQIGRAVSID-VINASWR 95

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
              P +   +I +   + G     +  +S    +  ++   +R+ ++ I+   L     +
Sbjct: 96  GLRPQLSLTNITVHD-QQGEPALTLPQVSTTLSWSSVVVASLRLENLSIEGADLAIRRDA 154

Query: 119 KGVSNWFQRKSTMDM-----IHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISAR 172
            G                     +   +I ++  +++  D+        L D+NL +  R
Sbjct: 155 GGKLFVAGIPVPTGGDGSSLDWLLSQREIVIRHSKLRWDDELRQAPELVLEDVNLVLHNR 214

Query: 173 FLNIISPLSI---DSIKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAISLKIQLFPL 226
           +L     L      S    +      +   F       +      A  +   L +     
Sbjct: 215 WLRHRLSLRAIPPTSYAAPLDVRADFSHPAFARSSDILRWKGTLYADLQRTDLSVWRAYF 274

Query: 227 AYPIII-DLFGNLFWNEKQ-----PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280
            YPI I    G++             ++   ++    ++L          R++G    S+
Sbjct: 275 DYPIAIQSGTGSVRAWLALDHAKVANFTADLALNNFNAQLSRQLEPLSLKRVNGRISASE 334

Query: 281 GNVRISR 287
                  
Sbjct: 335 SLGATPE 341


>gi|17986698|ref|NP_539332.1| hypothetical protein BMEI0415 [Brucella melitensis bv. 1 str. 16M]
 gi|17982320|gb|AAL51596.1| hypothetical protein BMEI0415 [Brucella melitensis bv. 1 str. 16M]
          Length = 618

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/310 (9%), Positives = 87/310 (28%), Gaps = 31/310 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80
           +P  +     R    ++ +   G  + ++   ++ + P        + +     +     
Sbjct: 1   MPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 60

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127
              + + +    L  + G I   +  I +PH+N                +S G      R
Sbjct: 61  MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 120

Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                +        +         GR+ + D         S+ N+    +  ++ + L  
Sbjct: 121 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 180

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                +   +G+  +  + + F +T           +  +     A P+ +   G    +
Sbjct: 181 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 240

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292
             +  + G  +            L+              L+     +   ++ +  ++ +
Sbjct: 241 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 299

Query: 293 ILPNSSTDED 302
               +    +
Sbjct: 300 NGSPAKGVIE 309


>gi|313157485|gb|EFR56904.1| hypothetical protein HMPREF9720_1119 [Alistipes sp. HGB5]
          Length = 821

 Score = 86.5 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 44/326 (13%), Positives = 98/326 (30%), Gaps = 31/326 (9%)

Query: 13  FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID 72
             ++++ A  V         +   E+    ++G+ I ++  ++++I     +  + +RI 
Sbjct: 2   AVLIVIAAIAVSPV-----AKNYIEKHDRELIGRSIRME-RLRMNIFTG-RLRIEGLRIG 54

Query: 73  QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG------------ 120
             ED +   +++   MR    PLL   + V  +    P +  Y                 
Sbjct: 55  GSEDSTTFFRLDSFEMRMRLWPLLGNRVLVKKISFAGPDVKIYQRGNAFSFDDITARFAG 114

Query: 121 -VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII-- 177
             +              + +  I ++ GR+   D   D  + ++DLNL I   + +    
Sbjct: 115 DTTAVAATPEKTSKPWEIGIYDISIRNGRVFYKDLALDAEWGMNDLNLHIPGVYFSGEKT 174

Query: 178 --SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKIQLFPLAYPIIIDL 234
               +   +  GS+  +   N ++      I     A    +   +  L   A    +  
Sbjct: 175 DVGAVLNFAEGGSLSTDVGYNIESSEFDIGIRLQDFALAGTLPYFRQSLDVTAVDGRLSA 234

Query: 235 FGNLFWNEK---QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF---KISDGNVRISRY 288
              L  N +        G  S+AG   +       A    L        +        R 
Sbjct: 235 DSRLRGNTQHLLSLTTEGTASLAGFALRDRQQRPVAGVDTLGVKLAEGDLGKMRFVFDRI 294

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENL 314
            +  +        +     +  +   
Sbjct: 295 YVSGLSALFEMTPEGNNLAALMKSPA 320


>gi|168701238|ref|ZP_02733515.1| hypothetical protein GobsU_17066 [Gemmata obscuriglobus UQM 2246]
          Length = 1329

 Score = 86.5 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 52/379 (13%), Positives = 114/379 (30%), Gaps = 20/379 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-- 59
           LR  LIG+G L ++V+V    + +++     +    R+ +  +G  + V     + +   
Sbjct: 8   LRWALIGVGGLLAIVVVLRVGLGVYLATGAGKGLVARKISAQIGMPVEVT---SVRLGLV 64

Query: 60  -PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
                +   D         S    +E  S       L +  I    + +   +L  ++SS
Sbjct: 65  TSSIGLKLFDPA-APAGGKSEVFAVEDASADISLFGLATSRISPQQVTLRGVNLTLHVSS 123

Query: 119 KGVSNWFQRKSTMDMIH-NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
            G       K           L  I +  GR+ I        + L +LN  ++     ++
Sbjct: 124 DGKVVTTLPKMPESGGSGGGTLPNIVLADGRLTIRQD-GRPEFALHNLNATVTPAGDRVV 182

Query: 178 SPLSIDSIK-GSVIAEGTGNFDNKRSAFKITA--NFPAKNKAISLKIQLFPLAYPIIIDL 234
              ++D         +G    +      +          ++  S+      +   I  D 
Sbjct: 183 IDGTMDDPAWSQWTLKGEIAKNGSAGEVRFETPDGPLTMDRLESVPFVPASVWKSIRADG 242

Query: 235 FGNLF---WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
            G +    W +          +  + + L   + S   ++++G   ++   +++   K Q
Sbjct: 243 RGAVAVRLWTDSSADVHYAVDIKPNEASLTLPDASVTLAKVTGLINLTGAKIKLVGAKAQ 302

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
                 +   D         E  L  +     +  DL +     +  +          D+
Sbjct: 303 L--AGGTLAVDGVA--DFAPEPTL-VTLKATAANLDLKQLPPEWKLPRDMDGKLQGSADV 357

Query: 352 QYSVNKKEEKDNSHDKENQ 370
              V        S   E  
Sbjct: 358 SLQVFADGRLVPSGSGEGA 376


>gi|260169266|ref|ZP_05756077.1| AsmA family protein [Brucella sp. F5/99]
 gi|261758779|ref|ZP_06002488.1| AsmA family protein [Brucella sp. F5/99]
 gi|261738763|gb|EEY26759.1| AsmA family protein [Brucella sp. F5/99]
          Length = 645

 Score = 86.5 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/309 (9%), Positives = 86/309 (27%), Gaps = 31/309 (10%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFES 81
           P  +     R    ++ +   G  + ++   ++ + P        + +     +      
Sbjct: 29  PFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPLM 88

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQRK 128
             + + +    L  + G I   +  I +PH+N                +S G      R 
Sbjct: 89  SADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIRA 148

Query: 129 STMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
               +        +         GR+ + D         S+ N+    +  ++ + L   
Sbjct: 149 QRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEWP 208

Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWNE 242
               +   +G+  +  + + F +T           +  +     A P+ +   G    + 
Sbjct: 209 RTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANISR 268

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSI 293
            +  + G  +            L+              L+     +   ++ +  ++ + 
Sbjct: 269 DRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTAN 327

Query: 294 LPNSSTDED 302
              +    +
Sbjct: 328 GSPAKGVIE 336


>gi|126658898|ref|ZP_01730041.1| hypothetical protein CY0110_20293 [Cyanothece sp. CCY0110]
 gi|126619848|gb|EAZ90574.1| hypothetical protein CY0110_20293 [Cyanothece sp. CCY0110]
          Length = 1981

 Score = 86.5 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 49/337 (14%), Positives = 115/337 (34%), Gaps = 32/337 (9%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65
           LI  G L S+ +     V  F+ +        +Q +  + +++ V       +     + 
Sbjct: 33  LIAGGVLLSLGVAAYGGVNYFV-YNQLSPLLSQQLSKALEREVRVGEVESFSLN---RIR 88

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
                I   E+      ++GL+++   LPLL G+    D+ ID P+L    +  G    F
Sbjct: 89  IGQTSIPTTENDPDRVDLDGLTIQFNPLPLLIGQPLDLDITIDDPNLYVEQNPSGKWLGF 148

Query: 126 QRKSTMDMIH---NVILE-KIHVKGGRIKIIDQESDQVYFLS----DLNLQISARFLNII 177
           Q +  ++       V ++  I +    I ++     ++  +           S     I 
Sbjct: 149 QEREQIEDTELNLPVDIDADIQLNNANIALLPNGFKELIEVDAEGTAGYTYRSNEEQEIS 208

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
             L +  +  ++  +G  N  + ++  ++  +  A  +  +L   L       +++   N
Sbjct: 209 YNLDVSLLNSAIAVKGETNIKSFQTQAELMISQLALPELAALIPNLPVTLKSGLVESNLN 268

Query: 238 LFWNE----KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
           +        +    +G F ++   + L  L++     +L      ++  V+ +  +L   
Sbjct: 269 INVPSLEEIEGTEGNGNFQLSNVQAGLDALKVP---IKLDLGLNFNNKTVQFNETRLSL- 324

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330
                     K               +G +   D+N 
Sbjct: 325 ---------GKFVTDIKGSLNWQ---DGYDIDVDINP 349


>gi|254694276|ref|ZP_05156104.1| AsmA [Brucella abortus bv. 3 str. Tulya]
          Length = 645

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 29/311 (9%), Positives = 85/311 (27%), Gaps = 31/311 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79
            VP  +     R    ++ +   G  + ++   ++ + P        + +     +    
Sbjct: 27  VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126
               + + +    L  + G I   +  I +PH+N                +S G      
Sbjct: 87  LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146

Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           R     +        +         G + + D         S+ N+    +  ++ + L 
Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGHVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240
                 +   +G+  +  + + F +T           +  +     A P+ +   G    
Sbjct: 207 WPRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291
           +  +  + G  +            L+              L+     +   ++ +  ++ 
Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325

Query: 292 SILPNSSTDED 302
           +         +
Sbjct: 326 ANGSPVKGVIE 336


>gi|284103083|ref|ZP_06386063.1| AsmA family protein [Candidatus Poribacteria sp. WGA-A3]
 gi|283830285|gb|EFC34525.1| AsmA family protein [Candidatus Poribacteria sp. WGA-A3]
          Length = 1130

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 70/191 (36%), Gaps = 10/191 (5%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           +R++  L  +F + + G   V  F    D +          +G  + ++  +++  LP+P
Sbjct: 6   KRLISSLFLVFILCVAGVVYVATF-HVEDLQRMARDLIAGSLGDHVVIE-DMQVRFLPYP 63

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            V   D+ ++    G+   +   + +    L L+   +    + I+  +L+   +  G  
Sbjct: 64  QVDLTDVSVNDPRQGTPIFQASHIQLDLNVLSLMQQTLMPNALLIEDAYLDLERNENGQW 123

Query: 123 NWFQRKSTMDMIH-----NVILEKIHVKGGRIKIIDQESDQVYFL---SDLNLQISARFL 174
           N+                 +    + +  G +   D+   +   +    ++ LQ+    L
Sbjct: 124 NYRDIFQPDAAGQVGIGTWLSGRSLTLTNGSVHFEDRYRRESALVVHAEEVELQVEQLVL 183

Query: 175 NIISPLSIDSI 185
           +  + + + + 
Sbjct: 184 DGTTEMFLSAR 194


>gi|75677214|ref|YP_319635.1| hypothetical protein Nwi_3033 [Nitrobacter winogradskyi Nb-255]
 gi|74422084|gb|ABA06283.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
          Length = 649

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 91/298 (30%), Gaps = 35/298 (11%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAE 91
              + +     G +IA+ G   I + P P      +  D+        +  +  +    E
Sbjct: 34  SLVQDRIERDTGYRIAINGTTGIELWPSPGFALHHVTFDRPGSAATDAQLAVGEVRATLE 93

Query: 92  FLPLLSGEIRVFDMYIDQPHLN--FYLSSKGVSNWFQRKSTMDMIHN---VILEKIHVKG 146
              LLSG +++ ++ ID P L         G     +   + +   +     + ++ V  
Sbjct: 94  LAGLLSGTLKISELTIDHPTLRAPLLRERTGGGVPSRPDRSEETAGDDTAFPIGRVTVSN 153

Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKI 206
           G I   D ++     + D+N  +                   +   G      +   F I
Sbjct: 154 GAIVFFDPQTGWEDRIDDVNASVRLGADRR------------INITGDARPGGRSLTFAI 201

Query: 207 TANFPAKNK---AISLKIQLFPLAYPII-IDLFGNLFWNEKQPI------------YSGV 250
            A  PA       I  ++ L     P   +     +  N +  +            ++G 
Sbjct: 202 AATPPAGPLGRRNIPTELTLEVSGAPTRQLTARAEVRINRQTLLINGLSGSLDDGKFNGW 261

Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308
            SV      L+ ++L  +K  LS     +      ++   +    ++  D      V 
Sbjct: 262 ASVDLASKPLVKVDLDFQKLDLSAAPSEASAPRSGAQPSSEQSWSDAPIDVGGLNYVD 319


>gi|116625557|ref|YP_827713.1| hypothetical protein Acid_6504 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228719|gb|ABJ87428.1| conserved hypothetical protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 513

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 56/365 (15%), Positives = 116/365 (31%), Gaps = 30/365 (8%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE--DGSFESKIE 84
           ID   FR   E++ T ++G+++ + G +K+ IL   SV   D+ I            K +
Sbjct: 15  IDPNHFRPTLEQELTKVLGREVKL-GELKLSILSG-SVTANDLSIADDPAYSRDAFVKAK 72

Query: 85  GLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKGVSNWF------------QRKSTM 131
            L +  E  PLL S ++ V  + I+QP +       G  N+                   
Sbjct: 73  SLGVGVELWPLLTSRQLHVTGLTIEQPSIALIQFPNGEWNFSKLGGDKMPAKVAAAPPPA 132

Query: 132 DMIHNVILEKIHVKGGRIK-IIDQESDQVYFLSDLNLQISARFLNIISPLSID---SIKG 187
               ++ ++ + + GG    +      +   L D+NL+I         P +     +  G
Sbjct: 133 SSAMDLSVKLVRITGGHFSVLRVGGHARPLVLDDVNLEIRDFSAGSAFPFTFATKVAGGG 192

Query: 188 SVIAEGTG----NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243
           +V  +G        D   S    + N    + A +  I     A   ++ L   L  + K
Sbjct: 193 TVKLDGKAGPIDAVDVAASPLTASVNVDRLDLAGTG-ITQSAPAISGLVGLDSTLESDGK 251

Query: 244 QPIYSGVFSVAGDFSK-LLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
                G                    +   S +  +   + ++ + +++     ++    
Sbjct: 252 IARVKGKVKADNLKLAIHGKPAKRPVEFEFSLDQDLRKRSGQLRQGQIKIGSAVANLSGT 311

Query: 303 NKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKD 362
                 Q    +++   NG +      E               L+       ++     +
Sbjct: 312 ---YADQGASTVIHMVLNGPKMAVTELEALLPALGVVLPNGSSLQGGTASVRLDMDGALE 368

Query: 363 NSHDK 367
           +   K
Sbjct: 369 SLVTK 373


>gi|91775553|ref|YP_545309.1| AsmA [Methylobacillus flagellatus KT]
 gi|91709540|gb|ABE49468.1| AsmA [Methylobacillus flagellatus KT]
          Length = 700

 Score = 86.1 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 41/348 (11%), Positives = 102/348 (29%), Gaps = 27/348 (7%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPL--FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           RR++     L  + L       +     W+  RE  +   +  + + + +    ++ +L 
Sbjct: 11  RRLIKFGKILLWLFLGVILAFVICEVQGWSFLREPAQSLLSKQLERDVRLDKPFRLRLLS 70

Query: 61  FPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLL----SGEIRVFDMYIDQPHLNF 114
              +    + I   E          + + ++  +  L      GE+R+ ++ +D      
Sbjct: 71  GIQLDLGHLYISAPEKFNVPHLVDADNIRLKLRYRDLWHYRKQGELRIHEIIVDAIDGQL 130

Query: 115 YLSSKGVSNWFQRKSTMDMIHNV-ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
              + G ++W   K          I+E + V+ G   I D  S      +          
Sbjct: 131 VRHADGSASWDFPKDESQPASPFPIIETLIVRNGSGHIDDAISATKLKAT---------- 180

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA---KNKAISLKIQLFPLAYPI 230
                     +++  V  +G       ++  +     P       +  +K + +     +
Sbjct: 181 FKTDEGAKQAALRSEVSVDGQFKHRPLKAFLETPGFLPVATHDEDSPPIKSKGWLEYGKL 240

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISDGNVRI 285
            +D  G       +    G   V G    +L   + +        RLS +         +
Sbjct: 241 RVDFDGQAADLFGRLNIEGSAVVTGPSLSVLGELVGSVFPTTDPFRLSASLSKQKDVWEV 300

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
           +    +    + +       +       +L+   +G+          F
Sbjct: 301 NVDSAKIGRSSLAATFQYDPRSKTTGIPILSGHIDGSRFYLADLAPAF 348


>gi|260758541|ref|ZP_05870889.1| AsmA family protein [Brucella abortus bv. 4 str. 292]
 gi|260762364|ref|ZP_05874707.1| AsmA family protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260668859|gb|EEX55799.1| AsmA family protein [Brucella abortus bv. 4 str. 292]
 gi|260672796|gb|EEX59617.1| AsmA family protein [Brucella abortus bv. 2 str. 86/8/59]
          Length = 619

 Score = 86.1 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/310 (9%), Positives = 86/310 (27%), Gaps = 31/310 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80
           VP  +     R    ++ +   G  + ++   ++ + P        + +     +     
Sbjct: 2   VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127
              + + +    L  + G I   +  I +PH+N                +S G      R
Sbjct: 62  MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121

Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                +        +         GR+ + D         S+ N+    +  ++ + L  
Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                +   +G+  +  + + F +T           +  +     A P+ +   G    +
Sbjct: 182 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 241

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292
             +  + G  +            L+              L+     +   ++ +  ++ +
Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300

Query: 293 ILPNSSTDED 302
                    +
Sbjct: 301 NGSPVKGVIE 310


>gi|92114357|ref|YP_574285.1| hypothetical protein Csal_2235 [Chromohalobacter salexigens DSM
           3043]
 gi|91797447|gb|ABE59586.1| conserved hypothetical protein [Chromohalobacter salexigens DSM
           3043]
          Length = 1290

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/339 (12%), Positives = 102/339 (30%), Gaps = 28/339 (8%)

Query: 3   RRVLIGLGFLFS-VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  L  +  +   + L+      +      FR + E            V+  +      +
Sbjct: 9   RWALTIMAIVLGGIALILLAARGVTTQADAFRGELESLLASRFSANAEVQ-RLGAEWHGW 67

Query: 62  -PSVFFKDIRI-DQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSS 118
            P++    + +      G+    ++    R + L  L  G        +++  ++ Y   
Sbjct: 68  DPALNLSGVTLRAATRQGAPLLSLDSAQARLDTLASLRAGYPVFARADVERATVHLYQRE 127

Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
            G   W   +        V   +  +     + +     Q   + D  + +  +  ++  
Sbjct: 128 DGGWGWPSAEV----PEQVQSSRFRLADLD-RWVGALLRQRVTIDDARVVLHGQNDSVTL 182

Query: 179 P---LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
               L +         EG  +   +                    +  F  A  + ++  
Sbjct: 183 VAPRLLMAGGDSRAHLEGRMHVAGEP---SAALTAVLDVLPGQRGLGAFNAALQVDVNAD 239

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
           G L          G    A +   L  LE  A+      + ++ D  +R+S  +L++   
Sbjct: 240 GLLAL--------GRVLTANERYTLSALEGDARLWARWHDARLEDARLRLSLPRLEATQR 291

Query: 296 NSS----TDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330
           +      TD   + +  +D++   +   NG  +  D N+
Sbjct: 292 DGPPLSFTDIGLRAQALRDDDGGWDLWANGLSATRDDND 330


>gi|261315767|ref|ZP_05954964.1| AsmA family protein [Brucella pinnipedialis M163/99/10]
 gi|261304793|gb|EEY08290.1| AsmA family protein [Brucella pinnipedialis M163/99/10]
          Length = 619

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/310 (9%), Positives = 86/310 (27%), Gaps = 31/310 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80
           VP  +     R    ++ +   G  + ++   ++ + P        + +     +     
Sbjct: 2   VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127
              + + +    L  + G I   +  I +PH+N                +S G      R
Sbjct: 62  MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121

Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                +        +         GR+ + D         S+ N+    +  ++ + L  
Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                +   +G+  +  + + F +T           +  +     A P+ +   G    +
Sbjct: 182 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 241

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292
             +  + G  +            L+              L+     +   ++ +  ++ +
Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300

Query: 293 ILPNSSTDED 302
                    +
Sbjct: 301 NGSPVKGVIE 310


>gi|301064893|ref|ZP_07205256.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300441015|gb|EFK05417.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 1171

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/337 (14%), Positives = 111/337 (32%), Gaps = 42/337 (12%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61
           +  LI +  +    L G F +P        +   ++     + + + V+   ++ + P+ 
Sbjct: 25  KLFLIAVCSVLVYTLAGFFLLPYI-----LKSQLKKYVAEDLNRTLQVE---EVRLNPYA 76

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            ++    + +  + DG      +   +  E   L        D+ +D   L   ++    
Sbjct: 77  LTLNISGLAL-NEADGEGILAFKRFFVSFELKSLFRWAWTFADVSLDGLVLQVDVAPDKS 135

Query: 122 SNW---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQE--SDQVYFLSD 164
            N                    +T   +  +  E+I +  G I+I D+   +     +  
Sbjct: 136 VNLDRLVRDLSPERPHAAPPEPATDAPLPRLYFERIQLSNGYIRIRDRSLPTPAEIPIEP 195

Query: 165 LNLQIS--ARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS- 218
           +NL+I+  +       P  I +     G +   G  + D   S  +          A + 
Sbjct: 196 INLEITHLSTLPEEKGPHKITARLPDDGILEWSGEISLDPIWSEGQFKLKNLHTKLAWNF 255

Query: 219 LKIQLFPLAYPIIIDLFGNLFWN-----EKQPIYSGVFSVAGDFS---KLLNLELSAKKS 270
           LK  L   A   I+ L G+  ++      +  I      +             EL+    
Sbjct: 256 LKQTLKIDAPEGILGLEGHYLFDYTAKVPQIKISDLTMQLDKLNLKVMNTPKAELAINAI 315

Query: 271 RL-SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
           R+ +G F ++  ++ + R  L      ++ ++  +  
Sbjct: 316 RVDNGRFDLAKNDLAVGRLTLSGGSLQAAVEKGGRLS 352


>gi|77918246|ref|YP_356061.1| hypothetical protein Pcar_0632 [Pelobacter carbinolicus DSM 2380]
 gi|77544329|gb|ABA87891.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
          Length = 1197

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/349 (14%), Positives = 97/349 (27%), Gaps = 42/349 (12%)

Query: 2   LRRVLIGLGFLFSV-VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +RR+ +      ++  +V    +P  I     R   E Q +  +G   ++    K+   P
Sbjct: 16  IRRIALWTAGFIALWAVVAGLILPPII-----RHVAENQLSEKLGSACSLG---KVRFNP 67

Query: 61  F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           F   +    +R+   +       +E   +R     +      + D+ +  PHL   L   
Sbjct: 68  FTLRLTADKLRVPLPDG-EECFSLERFEIRVSPAGIYRFAPVLSDLKLTDPHLEMRLRPD 126

Query: 120 G--------------------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159
           G                                 +  V+L  + + GG I   D      
Sbjct: 127 GSLSLADLGQALQKASPDETSQPQTSDTTQKEWNLFGVMLTDLEITGGLIHFRDDIRVTE 186

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
           + ++DL   +                  ++        + +           A+      
Sbjct: 187 HTVADLGFYVPFTSTLKRHRER------AITPYLEAVINGRPLRVDGRLAPFAEQLHTEF 240

Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
            I+L  L     +     +       +  G FS    FS     E   +   LSG   ++
Sbjct: 241 DIRLDNLDL---VRFQPYVQPFTSAILNDGQFSTDLIFSMRQQPETGIRLG-LSGQLTLA 296

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328
              V     +    LP  + + D     S+           G ++   L
Sbjct: 297 GLEVLAPDGEEALRLPRLNVELDGALNTSEGMTLK-KVDVQGLQAHLTL 344



 Score = 44.5 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 35/277 (12%), Positives = 78/277 (28%), Gaps = 29/277 (10%)

Query: 70  RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF---- 125
            +   +     + +  L ++   +           + + +PH+N  +   GV+N      
Sbjct: 720 SLSVLDGKQEFAALRSLRIQDLDIQPGRQRYTTGPITLVRPHINLIVGDDGVNNLARLFG 779

Query: 126 ---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
                       S            + +  G ++I D             +      L +
Sbjct: 780 QTADNAAGTTTSSPPSQTKKEAQTDVTLGIGGLQISDANLVMRDERYQPAVINRLDKLAV 839

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
                 ++          G  D+     + + N    + A  L+ QL        +DL  
Sbjct: 840 TVEAVENTPDSLAKISFAGELDDAPIQGEGSINPLRADAATELQAQLK------TLDLTA 893

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
               +E+   Y             L+ ++S  + +L     I    + +     +   P+
Sbjct: 894 LSPMSERFIAYPLQ-----KGMFTLDSKISIAQGKLDSTHSIQLDGLELGD---KVEAPD 945

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
           +      K  VS  ++   N          DL++  F
Sbjct: 946 APNLPV-KLGVSLLQDPAGNIHLTLP-VRGDLDDPSF 980


>gi|161525812|ref|YP_001580824.1| hypothetical protein Bmul_2643 [Burkholderia multivorans ATCC
           17616]
 gi|189349467|ref|YP_001945095.1| hypothetical protein BMULJ_00595 [Burkholderia multivorans ATCC
           17616]
 gi|160343241|gb|ABX16327.1| conserved hypothetical protein [Burkholderia multivorans ATCC
           17616]
 gi|189333489|dbj|BAG42559.1| putative membrane protein [Burkholderia multivorans ATCC 17616]
          Length = 1399

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/331 (12%), Positives = 96/331 (29%), Gaps = 37/331 (11%)

Query: 2   LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55
           LRRV      +      V       +   +     +FR   ER  +  +  ++++ G + 
Sbjct: 24  LRRVFKVTLAVAIGTYFVACGTFLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GKLS 82

Query: 56  IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            H     P V    + I  ++       +   +    ++ LL     +  + +D+P L  
Sbjct: 83  PHWSGMQPGVEVTHLTIRGRDG-QVALSVPHATAALSWVSLLRLSPALSSLIVDEPDLVV 141

Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166
             ++ G  +            +       +  E I ++GG ++  D + D     LS + 
Sbjct: 142 ARAADGSLSIAGVGVASAHGGNDTFGTWLLKQEAIVLRGGTLRWRDAQHDAPELALSGIR 201

Query: 167 LQISARFLNIISPLSIDSIK----GSVIAEGTGN---FDNKRSAFKITANFPAKNKAISL 219
           L +        + L   +      G +                    T N       + L
Sbjct: 202 LAVLNDGRRHKAALQAPANGTLLLGPLDFRARFTHKALAPIGKPSNWTGNAYLSTGPVDL 261

Query: 220 KIQLFPLAYPI-----IIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270
           +     +  P+      ID      ++  +   +G   + G    L        L     
Sbjct: 262 QTLARYVDMPLTIHAGRIDNAIWATFSNGRLRSAGG-DLQGADVALRVRPTQPRLDVPTV 320

Query: 271 RLSGNFKISDGN---VRISRYKLQSILPNSS 298
               +  +  G    + ++ +  +   P   
Sbjct: 321 GFRWDLALDPGRDYTLHLTHFNAELGQPPLP 351


>gi|124267421|ref|YP_001021425.1| hypothetical protein Mpe_A2234 [Methylibium petroleiphilum PM1]
 gi|124260196|gb|ABM95190.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 1260

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 82/287 (28%), Gaps = 22/287 (7%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-P 62
           R L+      +   +    +         +   E  A+  +G  +A+    +I + P+  
Sbjct: 22  RALLWTAGGVATFALLWTLLIGAWLPGFLKPRIEAAASEALGAPLALD---RIELAPWRL 78

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
                 +++   E  +   ++  L        L      +  + + +P +     + G  
Sbjct: 79  EAVIAGLKLGPAE--APWLRVAELRADLSIESLWRLAPVLERVLVREPQIELERQAIGRY 136

Query: 123 NWFQ---------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
           N                        L  I ++GGRI I+D+ S   + +  L + +    
Sbjct: 137 NITPMLEALAKQPPAPPDAKPARFALNNIRLEGGRIHIVDRVSRSEHHVEGLQIGVP--- 193

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
                      +   V        +      +      A+ +   + +    L  P  ++
Sbjct: 194 ---FVSNLPSQVTIDVEPLLDARVNGSHLQVQGKTQPFAEGRRSHVDVSWQQLDVPRWVE 250

Query: 234 -LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
                L       +  G   +            +A   R++G+  +S
Sbjct: 251 AFAPLLPQALPIDVLRGQLDLRLAIGFEQRPAPAAPLLRIAGSATLS 297


>gi|254689787|ref|ZP_05153041.1| AsmA [Brucella abortus bv. 6 str. 870]
 gi|256258040|ref|ZP_05463576.1| AsmA [Brucella abortus bv. 9 str. C68]
 gi|297248870|ref|ZP_06932588.1| AsmA protein [Brucella abortus bv. 5 str. B3196]
 gi|297176039|gb|EFH35386.1| AsmA protein [Brucella abortus bv. 5 str. B3196]
          Length = 645

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/311 (9%), Positives = 85/311 (27%), Gaps = 31/311 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79
            VP  +     R    ++ +   G  + ++   ++ + P        + +     +    
Sbjct: 27  VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKP 86

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQ 126
               + + +    L  + G I   +  I +PH+N                +S G      
Sbjct: 87  LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAI 146

Query: 127 RKSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           R     +        +         GR+ + D         S+ N+    +  ++ + L 
Sbjct: 147 RAQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLE 206

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240
                 +   + +  +  + + F +T           +  +     A P+ +   G    
Sbjct: 207 WPRTSSAATLKSSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANI 266

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQ 291
           +  +  + G  +            L+              L+     +   ++ +  ++ 
Sbjct: 267 SRDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMT 325

Query: 292 SILPNSSTDED 302
           +         +
Sbjct: 326 ANGSPVKGVIE 336


>gi|261214585|ref|ZP_05928866.1| AsmA family protein [Brucella abortus bv. 3 str. Tulya]
 gi|260916192|gb|EEX83053.1| AsmA family protein [Brucella abortus bv. 3 str. Tulya]
          Length = 619

 Score = 85.3 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/310 (9%), Positives = 85/310 (27%), Gaps = 31/310 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80
           VP  +     R    ++ +   G  + ++   ++ + P        + +     +     
Sbjct: 2   VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127
              + + +    L  + G I   +  I +PH+N                +S G      R
Sbjct: 62  MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121

Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                +        +         G + + D         S+ N+    +  ++ + L  
Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGHVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                +   +G+  +  + + F +T           +  +     A P+ +   G    +
Sbjct: 182 PRTSSAATLKGSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 241

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292
             +  + G  +            L+              L+     +   ++ +  ++ +
Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300

Query: 293 ILPNSSTDED 302
                    +
Sbjct: 301 NGSPVKGVIE 310


>gi|326335493|ref|ZP_08201680.1| outer membrane protein [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325692259|gb|EGD34211.1| outer membrane protein [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 903

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 55/380 (14%), Positives = 119/380 (31%), Gaps = 32/380 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI--- 58
           ++++L  +G +F ++++   ++P        +E    +    V  +++      + I   
Sbjct: 1   MKKILKIVGIIFLILILTIVSIPFLF-KNTIKEKIMEKVNESVNAQVSFT-DFSLSIFKN 58

Query: 59  LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE----IRVFDMYIDQPHL 112
            P  +V    +++       G   + +     +     +L  +     R+    I    +
Sbjct: 59  FPNATVELGGLKVINNAPFEGDTLAYVGNFQAKVNLKDILFKKDNEPYRLLGFSIADAVV 118

Query: 113 NFYLSSKGVSNWFQRKSTMDMIHN-------VILEKIHVKGGRIKIIDQESDQVYFLSDL 165
           N  ++S+G  N+   K T +   N         L++  ++  R    D  S     L  L
Sbjct: 119 NIRMNSEGKGNFDIVKDTSETPDNEEPNNLSFDLKEYSIENLRFTFKDDTSKMSVVLDSL 178

Query: 166 NLQISARFLNIISPLSIDSI-KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
             +    F   I  L   ++ K S  ++GT    N   +           +  +LK    
Sbjct: 179 YHKGKGNFAEQILDLETTTVTKVSFASDGTAFLRNNVVSLDAILGIDLNQQKYTLK-NNT 237

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
                + ++  G +   +   +Y   F      F   L+L  +A    + G     +  +
Sbjct: 238 LKLNNLELNFNGFVQLLDDGQLYDLSFKTPKTTFKNFLDLIPTAYTKSIEGVQTTGEFTI 297

Query: 284 R---ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL---NETDFFEEE 337
                 +Y   SI         N                +      D+   N+T+  E+ 
Sbjct: 298 DGKIAGKYTSTSIPKLDIQMLSNNASFKYPSLPK-----SVRNIDIDIKIGNDTEKMEDT 352

Query: 338 EKKNKNDDLKKDDIQYSVNK 357
                      D   +SV  
Sbjct: 353 YMNINRFSFTIDQDAFSVKA 372


>gi|299148445|ref|ZP_07041507.1| outer membrane assembly protein [Bacteroides sp. 3_1_23]
 gi|298513206|gb|EFI37093.1| outer membrane assembly protein [Bacteroides sp. 3_1_23]
          Length = 838

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/381 (11%), Positives = 96/381 (25%), Gaps = 56/381 (14%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------IHILP 60
                   V+++  F +P       F+            K +  +   K          P
Sbjct: 2   KIAAITVGVIIILMFLLPF-----AFQGKIADIVKTEGNKMLNAQFDFKNLNISLFRNFP 56

Query: 61  FPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYLS 117
             SV  +D  +    +       +   ++       L       +  ++I+   L+  + 
Sbjct: 57  QASVTLEDFWLKGTGEFANDTLVQAGEVTAAVNLFSLFGDSGYDISKIFIEDTRLHAIVL 116

Query: 118 SKGVSNWFQRKST-------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
             G +NW   K                     V L++  +K   +   DQ+      + D
Sbjct: 117 PDGRANWDIMKPDTTATAEAPVSEEEASSPFKVKLQRFVIKNMNLIYDDQQGKMYADIRD 176

Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
            N   +    +  + L +++   S+  +  G      +    T +  A        ++  
Sbjct: 177 FNAVCAGDLGSDRTTLKLEAETKSLTYKMNGIPFLANANISATMDVDADLANNKYTLKDN 236

Query: 225 PLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
            +    I   + G +   +         +      K +   + A               +
Sbjct: 237 TIRLNAIQAGIDGWVALKDPAIDIDLKLNTNDIGFKEILSLIPA---------------I 281

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343
             + +        ++     K  +  D     N       +M              +   
Sbjct: 282 YATEFSSLKTDGTATLTATAKGILQGDTVPAFNIDMQVKNAMF-------------RYPA 328

Query: 344 DDLKKDDIQYSVNKKEEKDNS 364
                D I  S N +    N 
Sbjct: 329 LPAGVDQINISANVQNPGGNI 349


>gi|182414891|ref|YP_001819957.1| hypothetical protein Oter_3077 [Opitutus terrae PB90-1]
 gi|177842105|gb|ACB76357.1| protein of unknown function DUF748 [Opitutus terrae PB90-1]
          Length = 1041

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/350 (12%), Positives = 116/350 (33%), Gaps = 46/350 (13%)

Query: 13  FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71
               +VG F +P  I     R   E++ +  +G+++ ++   K+ + P+  SV  ++  I
Sbjct: 19  VLFTVVGFFVLPPLI-----RPQLEKRLSQELGRRVTIE---KLRLNPYTLSVTLENFAI 70

Query: 72  DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR---- 127
            + +  +     + L +  + L  L G   + D+ +D+      L + G  ++       
Sbjct: 71  MEPDGVTRFLGWQRLYVNFDALSSLWGSWVLGDIELDRFDARVVLQADGTFSFADLLKRF 130

Query: 128 ------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                  +  +    + + ++ V    +   D    Q +  +   L  +           
Sbjct: 131 TPTTPAPTPSEPARPIRIARLKVTETSVNFSDLSRAQPFTTTVGPLTFALTEFKT----- 185

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFK--ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
           +         E       ++ ++   + A        +SL+  + P   P   DL     
Sbjct: 186 VSQRGAPYRFEA-VTESGEKLSWAGTLQAEPMRSAGELSLEGIVLPKYAPYYADLT---- 240

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN----------VRISRYK 289
              +  + SG  SV G +   L       K    G  ++ +            + +  ++
Sbjct: 241 ---QADLTSGRLSVRGRYELDLTPGQHVMKLH-EGMLQLHEVKVVQRSDRSAVLDLPAFE 296

Query: 290 LQSILPNS-STDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE 338
           +  +  ++ S        V    +  +   ++GA ++  + +    +   
Sbjct: 297 ISGVDADALSQKATIAAIVLNGGKVSVRREKSGAINLLAMLQPAAPKGGS 346


>gi|91975484|ref|YP_568143.1| AsmA [Rhodopseudomonas palustris BisB5]
 gi|91681940|gb|ABE38242.1| AsmA [Rhodopseudomonas palustris BisB5]
          Length = 649

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 83/302 (27%), Gaps = 21/302 (6%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ESKIE 84
           I         + +     G +IA+ G  K+ + P  +V   D+ +    D +      I 
Sbjct: 26  IPSGAVTSAIQSRVERDTGYRIAIAGASKVSLFPGFAVTLNDVTVQNPNDRNPDSRFTIG 85

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI--LEKI 142
            +        +++G+  V ++ + +P L   L     +N     S+      +   +++I
Sbjct: 86  NVRAELALGSVIAGKPHVTELTLTKPELRVPLIRD-RNNAPAASSSAGSGKTIDAAIDRI 144

Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG---SVIAEGTGNFDN 199
            +K G + + +        +  +N +I+      I  +    + G       +      +
Sbjct: 145 TIKDGVVVMANAADRVEDRIDRINAEITIDPERRIHAIGGAQLAGKPAKFEIKAAPPAAD 204

Query: 200 KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG-------------NLFWNEKQPI 246
            +              +  L  +        ++ + G                    +P 
Sbjct: 205 AQPVPVDFKLDAPDLLSWPLAAKAEVRLRGALLQINGLSGTLGDGAFNGWASADLAGKPQ 264

Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
                              +         F +S  N   +  +L +   N          
Sbjct: 265 LKLDLDFQRLDLGNPRKPTAPGAPWSDARFDLSGLNYVDAEIRLSAAELNLGAAHFAPAS 324

Query: 307 VS 308
           + 
Sbjct: 325 ID 326


>gi|217979422|ref|YP_002363569.1| AsmA family protein [Methylocella silvestris BL2]
 gi|217504798|gb|ACK52207.1| AsmA family protein [Methylocella silvestris BL2]
          Length = 642

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/342 (14%), Positives = 102/342 (29%), Gaps = 34/342 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R +L  L  L  ++ + A  VP     +  R+    Q   I G     +G     +LP P
Sbjct: 28  RILLGSLCLLAILLGMTAAAVPWLFSTSALRDGITAQIRQITGLSTLSQGKAVFVVLPQP 87

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL------ 116
            +    I+               L        LL G++ +  + + +P +   L      
Sbjct: 88  HISIDAIQFADPSGAL-RIDAAYLKGYLRVSALLRGQLEIASVTLGEPQMVIDLAGRPMR 146

Query: 117 --SSKGV-SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
             S+ G  +N               L  + +  GR ++ +   D    +  +N+ +  R 
Sbjct: 147 SDSAIGRAANAKSATPQASSADETRLGVLTLVNGRARLTNSFGDSDAIVEAINVTVDWRK 206

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK-AISLKIQLFPLAYPIII 232
           L             S    GT  F ++ +        PA      +  + L   +  + +
Sbjct: 207 LG-----------ASANINGTARFRDQGADISAAIEHPADLMRGGASGLLLKIDSPALSL 255

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSK--------LLNLELSAKKSRLSGNFKISDGNVR 284
              G+L     Q  ++G  + +    +         + L    +   L  +   +  +  
Sbjct: 256 AAEGSLAS-GPQAQFAGRVTASAPSLRRLVETGGYFIALPAPFENFALEADVNATAPSAS 314

Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
            S  +LQ    +          +  +    L  +    E   
Sbjct: 315 FSNLRLQLDGNDYEGAL---AVLQGEGRPTLAGTLAANELSL 353


>gi|226525312|gb|ACO70911.1| hypothetical protein [uncultured Verrucomicrobia bacterium]
          Length = 516

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/385 (12%), Positives = 121/385 (31%), Gaps = 66/385 (17%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           + +LI  G + ++V+   F V L+I     +   + + +  +   + +       + P+ 
Sbjct: 6   KAILIVFGTVLALVVAIVFGVNLYIQSPAVQARIQEEISRSLRLPLKIT---NTSVTPWS 62

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            +    I I      S   +    + R   LP+ SG++ +++M +D P L +  +  G  
Sbjct: 63  DLRITGITI--PNGDSNLLEAASFNARYRLLPVFSGKLIIYNMSVDSPKLVWPQNEDGKW 120

Query: 123 NWF--------------------------------QRKSTMDMIHNVILEKIHVKGGRIK 150
                                              + K        VI+E   +K G ++
Sbjct: 121 ELPKPGQAVAKSAVVATATPEAAPPVIAPVEPKSQEPKPKKKSGFQVIVEGFEIKHGNVE 180

Query: 151 IIDQESDQVYFLSDLNLQISARFL---------------------NIISPLSIDSIKGSV 189
           ++D    +V   +D+++  +                         N+  P +  +    +
Sbjct: 181 LLDYAQHKVASFTDVHMLYTTLTPERIEGVAEISRIVWSEIFTFENVRFPFNYTADVVDL 240

Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
             + T  F     +        A     +   +   +     +    +        + +G
Sbjct: 241 -PQITATFGGGPVSSSFNLQSSAPKSPFTFAAKFDAVDVA-RVAKEASWGEGHASGVLAG 298

Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
                G+F + L  E +A  +  +G F+       +S +++           D + K S 
Sbjct: 299 SVDFHGNFPRFLRAEGTAHLTLANGRFQ------ELSYFEMIGNALQIKQLSDLRLKASS 352

Query: 310 DEENLLNFSENGAESMHDLNETDFF 334
            +  + +   N    + D ++    
Sbjct: 353 ADARIADEKINFDSLILDASDLQLT 377


>gi|298369438|ref|ZP_06980756.1| AsmA family protein [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283441|gb|EFI24928.1| AsmA family protein [Neisseria sp. oral taxon 014 str. F0314]
          Length = 705

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/321 (9%), Positives = 84/321 (26%), Gaps = 19/321 (5%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65
              L  + + +      +         R   E       G+ I     +   +LP P++ 
Sbjct: 17  FCILAAILATI-GLNVLLHHVFSTDQVRRHTEAFIRK-TGRTINFDRSVGRSLLPRPTLT 74

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
            K++ I   +       I    +   +  L S    +    +         +  G    +
Sbjct: 75  LKNVVISTPDGNHPAILIRETKIGFAWSALWSDNAPIEKWVVSGADTTLEQTPDG----W 130

Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII-SPLSIDS 184
             +            ++ ++  RI +   +         LN Q             ++  
Sbjct: 131 NLQDLWQQPAGSTPNRLIIESSRIDVRLPQGSYKIENFGLNTQRPEAGGRPFKINGTLQH 190

Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
               +  +G G +         T+    +  +  L+       + + +     L W  + 
Sbjct: 191 DTLPLRWQGNGIWR--------TSGGNWETPSFHLEAAGRLNDHTLTVSTDSALLWQPQS 242

Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
                        S   NL L+A+   ++   + +  ++        +    S    D  
Sbjct: 243 STLQARNFNLRADSSFHNLHLTAQSPLIT--LRNNHLSLNALSSAFTAGTSESRW--DGS 298

Query: 305 TKVSQDEENLLNFSENGAESM 325
            ++ +          +  +  
Sbjct: 299 LELDKVSLRPSIAVLDNFKFN 319


>gi|16264304|ref|NP_437096.1| hypothetical protein SM_b20816 [Sinorhizobium meliloti 1021]
 gi|15140441|emb|CAC48956.1| hypothetical protein SM_b20816 [Sinorhizobium meliloti 1021]
          Length = 429

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/344 (13%), Positives = 113/344 (32%), Gaps = 22/344 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR ++ L  + ++ +     +P  I     R +  RQ +   G  IA  G + +   P+
Sbjct: 1   MRRFILSLLGVAALAVAAIAVLPSLISSDWVRAELGRQLSAATGSSIAFNGPVNLSAFPY 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF-YLSSKG 120
            +V  +D+ +  + +G   ++   +S       L S  + +  + +D+P +     ++  
Sbjct: 61  LAVVAEDVTLSAEAEGIT-AEFAEVSGSVALSSLWSDRLHIKQIALDRPVIVLEEKAADE 119

Query: 121 VSNWFQRKSTMDMIHNV----------ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
            ++   R         +           +E + +  G   I     D    +SD+ L +S
Sbjct: 120 AASTADRGIETGSGDPLPALVAFLERSAIESVSITSGTF-IRRSAEDPEEVVSDVELTLS 178

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
           A  ++    LS  +  G    E +           + +    +   ++L  +  P   P 
Sbjct: 179 APDVDDAFSLSASARVGERSYETSFTIS------TLRSLLERQPADVTLTAEADPAPAPG 232

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
           + +   +          +G + + G   +      S     + G       ++   R  L
Sbjct: 233 LTNFEASGQVTLNA---NGSYQIRGGEVEAGEQAFSLNALFVPGERARFLVDLEADRLDL 289

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334
              +  +      +   +   +        G ++   +N     
Sbjct: 290 TPFMDVAPETSQTEAPAADTAKPANLQFLAGFDADMSINAAALT 333


>gi|237721209|ref|ZP_04551690.1| outer membrane assembly protein [Bacteroides sp. 2_2_4]
 gi|229449005|gb|EEO54796.1| outer membrane assembly protein [Bacteroides sp. 2_2_4]
          Length = 838

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/381 (11%), Positives = 96/381 (25%), Gaps = 56/381 (14%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------IHILP 60
                   V+++  F +P       F+            K +  +   K          P
Sbjct: 2   KIAAITVGVIIILMFLLPF-----AFQGKIADIVKTEGNKMLNAQFDFKNLNISLFRNFP 56

Query: 61  FPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYLS 117
             SV  +D  +    +       +   ++       L       +  ++I+   L+  + 
Sbjct: 57  QASVTLEDFWLKGTGEFANDTLVQAGEVTAAVNLFSLFGDSGYDISKIFIEDTRLHAIVL 116

Query: 118 SKGVSNWFQRKST-------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
             G +NW   K                     V L++  +K   +   DQ+      + D
Sbjct: 117 PDGRANWDIMKPDTTATAEAPVSEEEASSPFKVKLQRFVIKNMNLIYDDQQGKMYADIRD 176

Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
            N   +    +  + L +++   S+  +  G      +    T +  A        ++  
Sbjct: 177 FNAVCAGDLGSDRTTLKLEAETKSLTYKMNGIPFLANANISATMDVDADLANNKYTLKDN 236

Query: 225 PLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
            +    I   + G +   +         +      K +   + A               +
Sbjct: 237 TIRLNAIQAGIDGWVALKDPAINIDLKLNTNDIGFKEILSLIPA---------------I 281

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343
             + +        ++     K  +  D     N       +M              +   
Sbjct: 282 YATEFSSLKTDGTATLTATAKGILQGDTVPAFNIDMQVKNAMF-------------RYPA 328

Query: 344 DDLKKDDIQYSVNKKEEKDNS 364
                D I  S N +    N 
Sbjct: 329 LPAGVDQINISANVQNPGGNI 349


>gi|218886450|ref|YP_002435771.1| hypothetical protein DvMF_1354 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757404|gb|ACL08303.1| protein of unknown function DUF748 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 1428

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/381 (9%), Positives = 97/381 (25%), Gaps = 43/381 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R        + +  ++    +P        R   E Q +  +  +  V+   K+   P+ 
Sbjct: 32  RWTYTVAAIVAAWGVLAGLAMPPL-----LRGVLEDQLSDKLRVRCTVE---KVRFNPYS 83

Query: 63  -SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            ++  + +R+            + L         L     +  + +  P +       G 
Sbjct: 84  WALSIQGVRVPNPTGDGDMLTFDALEFSPGLSAALRLAPVLAYVRLVNPVVYVAHFGDGR 143

Query: 122 SNWFQ------------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            ++ +                   +     +         V  G +   D     ++ ++
Sbjct: 144 YSFSEFIPADGEGEGGKQDRADRSEGANKPLFPFAASNFEVVNGTVIFHDAPQKTIHTIT 203

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
           +L+  +            I      +        D +    +      A++      +  
Sbjct: 204 ELHFVVPFTSTMERDRERI------ITPSLNATVDGRALNVQGRLLPFAEHLRTEFDVVT 257

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
             +           L       + SG   V      +        +  L+G+  ++D  V
Sbjct: 258 DEVDLTQY---REYLAAFTPLRVESGRLGV-NLKLVVEQPAAHDVEFGLAGSVTLNDLRV 313

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA------ESMHDLNETDFFEEE 337
                K   +   S   E  +  +     ++   + +G        +   ++   F    
Sbjct: 314 NAPDGKEAVLGLTSGVVEVEEFSLLDRHVDVRRVALDGLLARVGRLADGSIDWVGFVAPA 373

Query: 338 EKKNKNDDLKKDDIQYSVNKK 358
             K +  D  K D       K
Sbjct: 374 GGKRQEPDQSKQDQSKQAQAK 394



 Score = 47.2 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/328 (10%), Positives = 83/328 (25%), Gaps = 18/328 (5%)

Query: 27  IDWTDFREDFERQ--ATLIVGK-----KIAVKGGI--KIHILPFPSVFFKDIRIDQKEDG 77
           +D T +RE         +  G+     K+ V+      +      SV   D+R++  +  
Sbjct: 260 VDLTQYREYLAAFTPLRVESGRLGVNLKLVVEQPAAHDVEFGLAGSVTLNDLRVNAPDGK 319

Query: 78  SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV 137
                +    +  E   LL   + V  + +D         + G  +W    +        
Sbjct: 320 EAVLGLTSGVVEVEEFSLLDRHVDVRRVALDGLLARVGRLADGSIDWVGFVAPAGGKRQE 379

Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197
             +    +  + +     + Q+    +             +     +      A G    
Sbjct: 380 PDQSKQDQSKQAQAKQDRAGQIDGARNDRQTGPRNGTMAATAAVASNGANGTGAGGATGK 439

Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257
           +             A+     + ++   L    ++     +         SG+ +   DF
Sbjct: 440 NPASPPASGKT--AAEQLPFVVNVRTLGLRDATVVWKDATVP-GGAVVRLSGLDATLTDF 496

Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317
           +     +        + + ++  G       K        +     K + +   E L   
Sbjct: 497 ATPGGKQQPKGGGAFTASLRMDGGGAAGEAAKPGPGGKPGAGAGTLKAEGTLTLEPL--- 553

Query: 318 SENGAESMHDLNETDFFEEEEKKNKNDD 345
              G     D  +           +   
Sbjct: 554 ---GVTLRLDARDLPLLPVRGYVAQAAP 578


>gi|33600317|ref|NP_887877.1| hypothetical protein BB1331 [Bordetella bronchiseptica RB50]
 gi|33567916|emb|CAE31829.1| putative exported protein [Bordetella bronchiseptica RB50]
          Length = 1149

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 79/234 (33%), Gaps = 21/234 (8%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
            R    +  + ++G+ ++V    KI   PF  ++   D+ + Q E  +   ++  L + A
Sbjct: 40  VRGALTQDVSAMLGRDVSVG---KIRFNPFTLTLRAHDLALAQPEGAAPLLQVAELDVSA 96

Query: 91  EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM--------------IHN 136
            ++ L      V  + + QP +          N+   +  +                   
Sbjct: 97  SWMSLFWFAPVVDSLVVRQPRIALVREDVTRFNFSDIQQKVADMTAQSPPEPEPEAGPPR 156

Query: 137 VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT-G 195
             L  + ++GG I + D+ S +   + ++ L +        +       +  +   G+  
Sbjct: 157 FSLNNMVLEGGEITLDDKVSGRQQRIDEIALGVPFISTFGYATDIDVQPRVHMRINGSPF 216

Query: 196 NFDNKRSAFK--ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
           +       F    ++        + L+        P+ + L   L  ++ Q ++
Sbjct: 217 DLTGVARPFDTVPSSTLDVSFAGLELEKWADAWPLPLPVKLERALLDSDLQVLF 270


>gi|297538915|ref|YP_003674684.1| AsmA family protein [Methylotenera sp. 301]
 gi|297258262|gb|ADI30107.1| AsmA family protein [Methylotenera sp. 301]
          Length = 675

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/319 (10%), Positives = 95/319 (29%), Gaps = 23/319 (7%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68
           +     + LV        I W   R   +R     + + + +    K+ ++    +    
Sbjct: 14  IFGAIVLALVLVVAFCEAIGWPFLRSPLQRFMQNKLERTVNIDAPFKLKLIGGLKLNAGG 73

Query: 69  IRIDQKEDG--SFESKIEGLSMRA---EFLPLLSGEI-RVFDMYIDQPHLNFYLSSKGVS 122
            RI    +    + +  +GL ++    +   + +G    +  +  +    +F     G S
Sbjct: 74  FRISAPPEFKVPYLASAKGLELQLRYSDLWGIETGSPYVIKSIKAEHIDAHFSRGLDGKS 133

Query: 123 NWFQRKSTMDMIHNVI-LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            W   K+  D I     ++ + ++ G+   +D    +   + + +     +  + +S ++
Sbjct: 134 TWQFNKNDTDPIRPFPLIQSLLIREGQ-AYVDDRLTKADLIIEFSTDEGQKNTSPVSKVA 192

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
           +         +G                      +  +  + +     +     G ++  
Sbjct: 193 VRGDFRERKLKGELTTQGFLPIAS------QDKNSAPVSSKGWLEYGKVYASFDGTVYDL 246

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYKLQSILPN 296
             +    G  ++ G     L   LS    R     +SG  + +     I     +    +
Sbjct: 247 FGEQNIKGQLAINGSSLGELGDLLSITLPRTTPFKISGGIERNHEVWLIDVASARIGQSD 306

Query: 297 SSTDEDNKTKVSQDEENLL 315
                  K +     +  +
Sbjct: 307 ----LSGKFEYDTRPDKSV 321


>gi|240136982|ref|YP_002961451.1| hypothetical protein MexAM1_META1p0212 [Methylobacterium extorquens
           AM1]
 gi|240006948|gb|ACS38174.1| conserved hypothetical protein; putative exported protein
           [Methylobacterium extorquens AM1]
          Length = 1175

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 51/322 (15%), Positives = 111/322 (34%), Gaps = 31/322 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R  L  L     +VLV A  VP FIDW+  R   +R  +  +G     +G I + +LP 
Sbjct: 1   MRDSLTALAGAVVLVLVAALAVPPFIDWSAHRALIDRTLSDSLGAGARSEGAIDLRLLPS 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P +    +R+  ++        + +       PLL GE+R     +++  L   +S + +
Sbjct: 61  PHLRLARLRLGAEDG--PALDAQAVDAEIALAPLLKGEVRFVQTSVERAGLTLPVSDEAL 118

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
               + ++       ++++ + ++   + I+          +  NL++ A          
Sbjct: 119 LLPREPQTLRRD---IVIDDLRIRRLTVAILRTGEAPQEQFAAENLRLRAP--------- 166

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
             ++ G  +AEGT         F +  +    + ++SLK+       P  ++L   +   
Sbjct: 167 --ALAGPWLAEGTAKGS----PFHLATSVAGSDGSLSLKLTGGGDTMP-RLELDARITLK 219

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS----------RLSGNFKISDGNVRISRYKLQ 291
            +    +                L+               L+  F      V+    +L+
Sbjct: 220 PEDASDADRVRRGLVPEAEGTARLTVGPPVQPAGAVLPLTLAAKFASRGPLVQAKTVELE 279

Query: 292 SILPNSSTDEDNKTKVSQDEEN 313
                 +       ++   E  
Sbjct: 280 LDPGGKAARLSGNGRLDLREAR 301


>gi|83312203|ref|YP_422467.1| hypothetical protein amb3104 [Magnetospirillum magneticum AMB-1]
 gi|82947044|dbj|BAE51908.1| Uncharacterized protein involved in outer membrane biogenesis
           [Magnetospirillum magneticum AMB-1]
          Length = 673

 Score = 84.6 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/266 (11%), Positives = 75/266 (28%), Gaps = 19/266 (7%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED-GSFESKIEGLSM 88
             +      +     G  ++  G  K+ + P P + F  + +      G     I+ +  
Sbjct: 31  EAYNRFLAERVKAATGLDLSFAGVTKLKLGPSPVLSFTGVTLSAAGGKGGPLLYIDRIEA 90

Query: 89  RAEFLPLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQRKSTMDMIH--NVILEKIHVK 145
           R   +PL   ++R+  + + +P L+     + G +                  L ++ ++
Sbjct: 91  RVALVPLALRQLRLDSITLIRPVLDLRQLGALGPTRPLDLTEAPAGAPITRPALSELRIE 150

Query: 146 GGRIKIID---------------QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
              ++  D                       L  +          +I PLS  +      
Sbjct: 151 DASVRWTDGHLQVAKASFHPETEAGGPLSLQLDGIWQNTPVSLSGVIGPLSSLAGGKPYP 210

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250
            +  G+        + +   P   K + L+++        ++ L       +    +   
Sbjct: 211 VQFKGSVGGANLTLRGSLAAPLAGKGLDLELRAQGEEMSDLLRLGPTTATPQALGPFKLA 270

Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNF 276
             V      +   +L A   R     
Sbjct: 271 TRVTDAAGSVALSDLDAVIGRRDAQL 296


>gi|213963631|ref|ZP_03391883.1| AsmA family protein [Capnocytophaga sputigena Capno]
 gi|213953759|gb|EEB65089.1| AsmA family protein [Capnocytophaga sputigena Capno]
          Length = 943

 Score = 84.6 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/333 (13%), Positives = 98/333 (29%), Gaps = 28/333 (8%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL---P 60
           + L  LG L  ++L      P+        E  ++ A   +  ++       +      P
Sbjct: 7   KALKYLGILVGLLLAFVIVFPMLY-PEYVTEKVKKLANDNLNGELNFS-KANLTFFTHFP 64

Query: 61  FPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLS 117
             ++   D+ +             ++ LS+  +   LL S +I + ++Y+    ++  + 
Sbjct: 65  SLTLNLDDVLLKGSAPFENDTLVSVKRLSLGIDVKELLFSKKIDIEEIYLKNAFVHIQVD 124

Query: 118 SKGVSNW------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
            +G +++       +     D    V L++I +K  R+   D+ +      +  N     
Sbjct: 125 KQGGASYNVYKSSEETTDEGDDDARVDLQRIELKDTRLIYDDKSTGIYIQANGFNYLGKG 184

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI-QLFPLAYPI 230
                I  L   +   S+     G    K               ++S    Q       +
Sbjct: 185 GLEESIFDLRTKAQIQSLDFIFGGETYLKDKHVNAELITQINTHSLSFIFQQNDLKINQL 244

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
            +D  G L +      Y   F +    S L +   +         F        +     
Sbjct: 245 PVDFKGKLDFLSNG--YDLNFEINSKDSNLNDFFTALPP-----QFTQWHKKATL----- 292

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
                +       K   SQ+    + F     +
Sbjct: 293 -KGKTDIFFSMKGKYIASQNLSPDIYFKMKVRD 324


>gi|134294814|ref|YP_001118549.1| hypothetical protein Bcep1808_0702 [Burkholderia vietnamiensis G4]
 gi|134137971|gb|ABO53714.1| conserved hypothetical protein [Burkholderia vietnamiensis G4]
          Length = 1403

 Score = 84.6 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 105/331 (31%), Gaps = 37/331 (11%)

Query: 2   LRRVL---IGLGFLFSVVLVGAFTVPLFI---DWTDFREDFERQATLIVGKKIAVKGGIK 55
           LRRV    + +G     V  GAF    ++      +FR   ER  +  +  ++++ G + 
Sbjct: 24  LRRVFRVTLAVGIGVYFVASGAFLGLRYVVLPRIDEFRPRIERAVSDKLHAQLSI-GRLS 82

Query: 56  IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            H     P V   ++ I  ++       +   +    ++ LL     +  + +D P L  
Sbjct: 83  PHWSGMQPGVEVTNLTIRGRDGRI-ALSVPHATAALSWISLLRLSPALSSLIVDHPDLVV 141

Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166
             ++ G  +            +       +  E I ++ G ++  D + D     LS + 
Sbjct: 142 ARAADGSLSVAGIGVATTHGGNDTFGTWLLKQEAIVLRNGTLRWRDAQHDAPELALSGIR 201

Query: 167 L----QISARFLNIISPLSIDSIKGSVIAEGTGNFD-----NKRSAFKITA---NFPAKN 214
           L          + + +P +   + G +               K + +   A     P   
Sbjct: 202 LAVLNHGREHKVALQAPANGTLLLGPLDFRARFTHKPLAPIGKPTNWTGNAYLSTGPVDL 261

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270
           + +   + L   A+   ID      + +     +G   + G    L        L     
Sbjct: 262 QTLGRYLDLPFTAHAGRIDNAIWATFQDGHLRSAGG-DLQGADVVLRVRPTQPRLEVPTV 320

Query: 271 RLSGNFKISDGN---VRISRYKLQSILPNSS 298
               +  +  G    + ++R+  +   P   
Sbjct: 321 GFGWDIALDAGRDYTLHLTRFNAELGQPPLP 351


>gi|329914122|ref|ZP_08276056.1| exported protein [Oxalobacteraceae bacterium IMCC9480]
 gi|327545205|gb|EGF30475.1| exported protein [Oxalobacteraceae bacterium IMCC9480]
          Length = 1391

 Score = 84.6 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/260 (11%), Positives = 87/260 (33%), Gaps = 12/260 (4%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGL 86
           +   ++ + E+ A+  +G+ +++ G I       +P +   D+ I  +        +  +
Sbjct: 70  NIDQYKPEVEQLASRALGQPVSI-GSIGATWRGLYPDLTLADVVIHDRRG-EAALTLPKV 127

Query: 87  SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-------QRKSTMDMIHNVIL 139
                +  L   ++R+  + +DQP ++     +G            +   +      +  
Sbjct: 128 EATLSWWSLAVADLRLRRLALDQPDIDIVRDPQGRFLVAGIAIDSGKPGDSAAADWILAQ 187

Query: 140 EKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSIKG-SVIAEGTGNF 197
            +I ++ G+I  IDQ+       L  ++  +   + N             +   +    F
Sbjct: 188 NEIVIRAGQIHWIDQQRGAPELILQQVDFTLRNSWRNHQVAFKAVPPATLAAPLDVRATF 247

Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257
            +      ++       +  +   +    A+   +D   ++               A   
Sbjct: 248 SHPHFGNAVSDARQWLGELYADLREADLAAWKTWLDFPVDVQSARGAVRAWLSIDRARIV 307

Query: 258 SKLLNLELSAKKSRLSGNFK 277
           +   +L+++   +RL  + +
Sbjct: 308 NLTADLDVAGISTRLRPDLQ 327


>gi|316936150|ref|YP_004111132.1| AsmA family protein [Rhodopseudomonas palustris DX-1]
 gi|315603864|gb|ADU46399.1| AsmA family protein [Rhodopseudomonas palustris DX-1]
          Length = 606

 Score = 84.6 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/305 (9%), Positives = 76/305 (24%), Gaps = 22/305 (7%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIE 84
           I         + +     G ++ + G   + + P  ++   D+  +  + G      KI 
Sbjct: 26  IPAGALTAAIQSRIERDTGYRVTIAGTGTVRLFPAVALTLHDVTAESPDGGPADPRLKIA 85

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIH 143
            +        L+S   R+ ++ +  P L+  L   +G +      +         +E+I 
Sbjct: 86  TVRAELPLTSLVSATPRITELTLISPELHLPLLRRRGDAVATPASARKADAGLAEIERIV 145

Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG-----NFD 198
           ++ G + +          +  +   +           S  +  G             + +
Sbjct: 146 IQDGAVVMTSAADRIERRIGGIQADVERDDARGPITASGSAALGRSPLSFELTATPPSDE 205

Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG-------------NLFWNEKQP 245
            +     +T + P       L+ +         + + G                    +P
Sbjct: 206 RQPILVDVTLDAPGL-LTSRLRARAEARLRDATLSINGISGKLGDAPFNGWAAVDVAGKP 264

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
                          +   + A              N   +  +L +   N         
Sbjct: 265 RVKLDLDFRRLDLVAITRSVPAGAPWSEAPLDFVGLNYVDAEIRLSAAELNIGPARIAPA 324

Query: 306 KVSQD 310
                
Sbjct: 325 SADAG 329


>gi|221202236|ref|ZP_03575270.1| conserved hypothetical protein TIGR02099 [Burkholderia multivorans
           CGD2M]
 gi|221209175|ref|ZP_03582168.1| conserved hypothetical protein TIGR02099 [Burkholderia multivorans
           CGD2]
 gi|221170993|gb|EEE03447.1| conserved hypothetical protein TIGR02099 [Burkholderia multivorans
           CGD2]
 gi|221177810|gb|EEE10223.1| conserved hypothetical protein TIGR02099 [Burkholderia multivorans
           CGD2M]
          Length = 1399

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/331 (12%), Positives = 96/331 (29%), Gaps = 37/331 (11%)

Query: 2   LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55
           LRRV      +      V       +   +     +FR   ER  +  +  ++++ G + 
Sbjct: 24  LRRVFKVTLAVAIGTYFVACGTFLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GKLS 82

Query: 56  IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            H     P V    + I  ++       +   +    ++ LL     +  + +D+P L  
Sbjct: 83  PHWSGMQPGVEVTRLTIRGRDG-QVALSVPHATAALSWMSLLRLSPALSSLIVDEPDLVV 141

Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166
             ++ G  +            +       +  E I ++GG ++  D + D     LS + 
Sbjct: 142 ARAADGSLSIAGVGVASAHGGNDTFGTWLLKQEAIVLRGGTLRWRDAQHDAPELALSGIR 201

Query: 167 LQISARFLNIISPLSIDSIK----GSVIAEGTGN---FDNKRSAFKITANFPAKNKAISL 219
           L +        + L   +      G +                    T N       + L
Sbjct: 202 LAVLNDGRLHKAALQAPANGTLLLGPLDFRARFTHKALAPIGKPSNWTGNAYLSTGPVDL 261

Query: 220 KIQLFPLAYPI-----IIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270
           +     +  P+      ID      ++  +   +G   + G    L        L     
Sbjct: 262 QTLARYVDMPLTIHAGRIDNAIWATFSNGRLRSAGG-DLQGADVALRVRPTQPRLDVPTV 320

Query: 271 RLSGNFKISDGN---VRISRYKLQSILPNSS 298
               +  +  G    + ++ +  +   P   
Sbjct: 321 GFRWDLALDPGRDYTLHLTHFNAELGQPPLP 351


>gi|33866022|ref|NP_897581.1| hypothetical protein SYNW1488 [Synechococcus sp. WH 8102]
 gi|33638997|emb|CAE08003.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
          Length = 1470

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 91/323 (28%), Gaps = 16/323 (4%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTD-----FREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + L    +V +     V       D     FR   ER     +G  I       +     
Sbjct: 11  LILISSAAVGVGSVLAVQTLDRTADEVLASFRGPLERSIGTALGHPITFGPYKGLRPW-- 68

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             V   +  I          K++GLS+  + L  L     V  + +    +       G 
Sbjct: 69  -GVALGETTIAPTRTDRSTIKVQGLSVHLDPLASLRQWQPVLRLKLQGLDVALDRQPDGR 127

Query: 122 SN-WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
              + +     +   ++ L     +  RI++     D++   S  ++QI+ +  + IS L
Sbjct: 128 YWRFGEVSQDGEAPPDLDLRFELAQPARIRLT-PSGDEIQLTSRGSVQIARQRFSAISRL 186

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
           S     GS+  E  G +D               +   ++                  + W
Sbjct: 187 SRLGRAGSLDLEAKGRWDRPELVLSSRLRSLDLSTLEAVLPGSDATGLAGQAGGDLAIQW 246

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300
              + +  G   V         L    + S +          V + R + +         
Sbjct: 247 TPSRFLCQGQLKVKDLELHNTTLPDPLRSSAV--GVSCRGDRVSLIRSRFRMG----DWR 300

Query: 301 EDNKTKVSQDEENLLNFSENGAE 323
            D +  V  D    L  +    +
Sbjct: 301 ADARGSVQLDGAVDLRINVASLK 323


>gi|33593676|ref|NP_881320.1| hypothetical protein BP2712 [Bordetella pertussis Tohama I]
 gi|33563749|emb|CAE42989.1| putative exported protein [Bordetella pertussis Tohama I]
 gi|332383080|gb|AEE67927.1| hypothetical protein BPTD_2670 [Bordetella pertussis CS]
          Length = 1153

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 79/234 (33%), Gaps = 21/234 (8%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
            R    +  + ++G+ ++V    KI   PF  ++   D+ + Q E  +   ++  L + A
Sbjct: 40  VRGALTQDVSAMLGRDVSVG---KIRFNPFTLTLRAHDLALAQPEGAAPLLQVAELDVSA 96

Query: 91  EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM--------------IHN 136
            ++ L      V  + + QP +          N+   +  +                   
Sbjct: 97  SWMSLFWFAPVVDSLVVRQPKVALVREDVTRFNFSDIQKKVADMAAQSPPEPEPESGPPR 156

Query: 137 VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT-G 195
             L  + ++GG I + D+ S +   + ++ L +        +       +  +   G+  
Sbjct: 157 FSLNNMVLEGGEITLDDKVSGRQQRIDEIALGVPFISTFGYATDIDVQPRVHMRINGSPF 216

Query: 196 NFDNKRSAFK--ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
           +       F    ++        + L+        P+ + L   L  ++ Q ++
Sbjct: 217 DLTGVARPFDTVPSSTLDVSFAGLELEKWADAWPLPLPVKLERALLDSDLQVLF 270


>gi|33595790|ref|NP_883433.1| hypothetical protein BPP1115 [Bordetella parapertussis 12822]
 gi|33565869|emb|CAE36416.1| putative exported protein [Bordetella parapertussis]
          Length = 1147

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 80/234 (34%), Gaps = 21/234 (8%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
            R    +  + ++G+ ++V    KI   PF  ++   D+ + Q E  +   ++  L + A
Sbjct: 40  VRGALTQDVSAMLGRDVSVG---KIRFNPFTLTLRAHDLALAQPEGAAPLLQVAELDVSA 96

Query: 91  EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM--------------IHN 136
            ++ L      V  + + QP +          N+   +  +                   
Sbjct: 97  SWMSLFWFAPVVDSLVVRQPRIALVREDVTRFNFSDIQQKVADMAAQSPPEPEPEAGPPR 156

Query: 137 VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT-G 195
             L  + ++GG I + D+ S +   + ++ L +        +       +  +   G+  
Sbjct: 157 FSLNNMVLEGGEITLDDKVSGRQQRIDEIALGVPFISTFGYATDIDVQPRVHMRINGSPF 216

Query: 196 NFDNKRSAFK--ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
           +      +F    ++        + L+        P+ + L   L  ++ Q ++
Sbjct: 217 DLTGVARSFDTVPSSTLDVSFAGLELEKWADAWPLPLPVKLERALLDSDLQVLF 270


>gi|325107364|ref|YP_004268432.1| hypothetical protein Plabr_0786 [Planctomyces brasiliensis DSM
           5305]
 gi|324967632|gb|ADY58410.1| hypothetical protein Plabr_0786 [Planctomyces brasiliensis DSM
           5305]
          Length = 854

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/348 (11%), Positives = 97/348 (27%), Gaps = 48/348 (13%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66
                LF   L     +P  +     R+             + + G   +     P+   
Sbjct: 78  WVFAGLFIAFLGVLAVLPQLLSTAAMRQQIASSLMQDFDGTVEIGG-ADLAWW-KPA-EL 134

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126
            ++ +   +     + I+   +      +        ++ +++P + + +   G +NW +
Sbjct: 135 SEMTMTDGQG-ETMATIQSAKVSTPLWRMFWPGSVPVELKVERPRIVYEIDRYGRTNWAK 193

Query: 127 ----RKSTMDMIHNVILE------KIHVKGGRIKIIDQESDQVYFLSDLNLQISAR---- 172
                ++          +       I V  G++ + D+ S +     +L+  +       
Sbjct: 194 VFGGLEAGQKSFRWPEFQHSGQPVHIRVSDGQVIVKDRVSGRTIEARNLDALLKKSPRFV 253

Query: 173 ------FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF----------KITANFPAKNKA 216
                    + S        G++ A+        + A            +    P   +A
Sbjct: 254 EGELTGQTRLTSEEEGSRPAGNISADFQLAMAGNKVAGGDVSGEISKTPLELIQPWLKQA 313

Query: 217 IS-LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
           +  L +              GNL     +    G  S     ++          + L+G 
Sbjct: 314 MPHLHLSAGNADGKFESKWTGNLR-TGLKLAVEGTLSADDVSAQSTKWNQQLTGTALTGK 372

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
           F I +             LPNS    D +  + + E +     E   +
Sbjct: 373 FSIDNT------------LPNSPGKFDIRWTLDEAELSDYRIEEEPQD 408


>gi|260755318|ref|ZP_05867666.1| AsmA family protein [Brucella abortus bv. 6 str. 870]
 gi|260884336|ref|ZP_05895950.1| AsmA family protein [Brucella abortus bv. 9 str. C68]
 gi|260675426|gb|EEX62247.1| AsmA family protein [Brucella abortus bv. 6 str. 870]
 gi|260873864|gb|EEX80933.1| AsmA family protein [Brucella abortus bv. 9 str. C68]
          Length = 619

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/310 (9%), Positives = 85/310 (27%), Gaps = 31/310 (10%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSFE 80
           VP  +     R    ++ +   G  + ++   ++ + P        + +     +     
Sbjct: 2   VPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLSVFPVLRASLSGVTLSKLTDQGQKPL 61

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-------------LSSKGVSNWFQR 127
              + + +    L  + G I   +  I +PH+N                +S G      R
Sbjct: 62  MSADRIDVELSPLDAIMGHISFSETQIVRPHVNLEAPVSNISQLLDAIANSNGRLGTAIR 121

Query: 128 KSTMDMIHNVILEKIHVKG-----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                +        +         GR+ + D         S+ N+    +  ++ + L  
Sbjct: 122 AQRALLQSGAKKNALAAGQASQPFGRVVVRDGTIAFNRAGSEPNVPHDKQITDVNATLEW 181

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                +   + +  +  + + F +T           +  +     A P+ +   G    +
Sbjct: 182 PRTSSAATLKSSAKWRGEATQFSLTVAQALPLLAGGTSDLTASLTANPLSLTFQGKANIS 241

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQS 292
             +  + G  +            L+              L+     +   ++ +  ++ +
Sbjct: 242 RDRF-FEGRLTAKTPSLSGAVRWLNLPPIAGSSEIGAFSLASTITATPKRLKFADVEMTA 300

Query: 293 ILPNSSTDED 302
                    +
Sbjct: 301 NGSPVKGVIE 310


>gi|149927492|ref|ZP_01915746.1| hypothetical protein LMED105_11915 [Limnobacter sp. MED105]
 gi|149823765|gb|EDM82991.1| hypothetical protein LMED105_11915 [Limnobacter sp. MED105]
          Length = 764

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/354 (12%), Positives = 109/354 (30%), Gaps = 25/354 (7%)

Query: 2   LRRVLIGLGFLFS----VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           +++ ++    +      V+   A  +   ID                 + +A  G +++ 
Sbjct: 1   MKKAIVWGMGIVVGVPLVLAATAAILVNTIDQQALLNKASAIVKEKQQRDLAFTGPVQLK 60

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
             P        + + + +      K + +S+    LPLLS E+ V  +      +N   +
Sbjct: 61  WFPSIGADLNGVTLSEFQSTDQFLKADKVSISLALLPLLSSEVVVDAIQASGVTVNVAKN 120

Query: 118 SKGVSNWF----------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           + G  N+                     T +   N  ++ I ++   +  ID+++     
Sbjct: 121 ADGKFNFDDLSKSDNQDEVQSESEPSPDTGEQALNFSVDSIALENLNVAYIDKQTGSEAS 180

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK 220
           L++  +Q       + + + +     +   +   N D N R  F +  N  A  + +   
Sbjct: 181 LNNFAMQSGRIEPGVPTDIELKGNVKANKPQADLNIDLNTRLEFGLGENLYANFENLKFA 240

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL-SGNFKIS 279
           +          +++  +   N                +K     + A    L S + ++S
Sbjct: 241 VLGQLDQQQADVNVQAS-TLNVNPNTLEIKAQSLDAKAKGQLPNVGAFDVSLISPSLELS 299

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
           +   R      ++ L  ++   +    +              A     +N  + 
Sbjct: 300 ETVARGEALNFKADLKQATRSIN--ATLDLAGLQGNLKQAVSAALKTTVNLVEG 351


>gi|307322552|ref|ZP_07601896.1| AsmA family protein [Sinorhizobium meliloti AK83]
 gi|306891796|gb|EFN22638.1| AsmA family protein [Sinorhizobium meliloti AK83]
          Length = 1004

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 103/297 (34%), Gaps = 20/297 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR ++ L  + ++ +     +P  I     R +  RQ +   G  IA  G + +   P+
Sbjct: 1   MRRFILSLLGVAALAVAAIAILPSLISSDWVRSELGRQLSAATGSSIAFNGPVNLSAFPY 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG- 120
            +V  +D+ +  + +G   ++   +S       L S  + +  + +D+P +     +   
Sbjct: 61  LAVVAEDVTLSAEAEGIT-AEFAEVSGSVALSSLWSDRLHIKQIALDRPVIVLEEKAADE 119

Query: 121 -----------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
                        +     + +  +    +E + +  G   +    +++   +S++ L +
Sbjct: 120 AAPTTAGSGHETGSGDPLPALVAFLERSAIESVSIASGTFILR-SATNRDEVVSNIALTL 178

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
           SA  ++    LS  +  G    E +          +        +  ++++    P    
Sbjct: 179 SAPDIDDEFSLSASARMGERNYETSFTIS----TLRSLLERQPADVTVTVEADPAPAPGL 234

Query: 230 IIIDLFGNLFWNEKQ--PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
              +  G +  N      I  G          L  L +  +++R   + +    ++ 
Sbjct: 235 TNFEASGQVTLNANGSYQIRGGQVEAGEQVFGLNALFVPGERARFLVDLEADRLDLT 291


>gi|27375469|ref|NP_766998.1| hypothetical protein blr0358 [Bradyrhizobium japonicum USDA 110]
 gi|27348606|dbj|BAC45623.1| blr0358 [Bradyrhizobium japonicum USDA 110]
          Length = 689

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 91/293 (31%), Gaps = 23/293 (7%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED--GSFESKIE 84
           I           +     G ++++ G  +I + P  +V   D+ +   +D  G     ++
Sbjct: 26  IPSGFLTSTIASRVESATGYRLSIDGTTRISLWPTLNVTLNDLTLQDPKDRSGITRLTVD 85

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST-MDMIHNVILEKIH 143
            +        + SG  ++ ++ + +P L   L  + + N                ++++ 
Sbjct: 86  SVQADMSLSSVWSGRPKISELIVTRPVLYQPLLRERLPNAGTSSKPLALDTDGATIDRVK 145

Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203
           V  G +            +S +N              ++     +V   GT       + 
Sbjct: 146 VTDGEVAFARVRDRVESRISAINAD------------AVVGRDRNVSITGTARVGEHPTK 193

Query: 204 FKITANFPA---KNKAISLKIQLF-PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259
           F I A  PA       I ++  +  P      +     +  +    + +GV    GD + 
Sbjct: 194 FDIKATTPAPPTDRPTIPVEFAIDMPDVLKSRLAGHAEMRLSGDLVMINGVNGTLGDGAF 253

Query: 260 LLNLELS-AKKSRLSGNFKISDGNVRISR-YKLQSILP--NSSTDEDNKTKVS 308
                +  A K  +  +       + +++     S  P  N+  D      V 
Sbjct: 254 NGWASVDIASKPLVKVDLDFQRLTIPLAKSPDGASGQPWSNAPIDVSGLNYVD 306


>gi|329115313|ref|ZP_08244067.1| Hypothetical protein APO_2392 [Acetobacter pomorum DM001]
 gi|326695292|gb|EGE46979.1| Hypothetical protein APO_2392 [Acetobacter pomorum DM001]
          Length = 625

 Score = 84.2 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/331 (10%), Positives = 86/331 (25%), Gaps = 36/331 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R +   G + +V  V    +   +   +       + +  +G+K  + G + +    +
Sbjct: 1   MPRWVWLAGSVLAVSTVAIGVLLAGLPHYNLAHIASDKISASLGRKTQI-GALHVRFGRW 59

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            +V   ++ +     GS      ++ L  +     L +G+++  D+ ID     F  +S 
Sbjct: 60  VTVDLDNLHLANIPQGSRADMISLKHLHAQILLSSLFNGQMQARDVKIDGFSGLFERTST 119

Query: 120 GVSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
              NW           + K     I    L    +    +                    
Sbjct: 120 REPNWRFGKKASSAPAKPKEPSGKIWFPGLRDAAITDSEVIYRSAHGHSYVT-------- 171

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP--AKNKAISLKIQLFPLA 227
                     L   S    ++    G ++      +         +         +   +
Sbjct: 172 ----GLKAVALHSTSDTAPLVMNVNGAYNGTPVTLQANMQPIDVLRQAGKPYGTDIHAAS 227

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK------LLNLELSAKKSRLSGNFKISDG 281
             + + L G +              +    S+              +   LSG+F     
Sbjct: 228 GDLSLHLNGTMTDLFDFDGIDAKLDLQTATSRPIMAFAGEADSKITQPVTLSGHFTHKGD 287

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312
              +      +   N S         ++  +
Sbjct: 288 VWHLDH---TTGSLNESPISTADVTFTEGAK 315


>gi|172036880|ref|YP_001803381.1| hypothetical protein cce_1965 [Cyanothece sp. ATCC 51142]
 gi|171698334|gb|ACB51315.1| hypothetical protein cce_1965 [Cyanothece sp. ATCC 51142]
          Length = 1230

 Score = 84.2 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/337 (14%), Positives = 114/337 (33%), Gaps = 32/337 (9%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65
           LI  G L S+ +     V  F+ +        +Q +  + +++ V       +     + 
Sbjct: 33  LITGGILVSLGVATYGGVSYFV-YEKLSPLLSQQLSKALEREVRVGEVESFSLN---HIR 88

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
             +  I   E+      + GL ++   LPLL G+    ++ ID P+L    +  G    F
Sbjct: 89  IGETSIPTTENDPDRLDLNGLKVKFNPLPLLIGQPLDINITIDDPNLYVEQNPSGKWLGF 148

Query: 126 QRKSTMDMIH---NVILE-KIHVKGGRIKIIDQESDQVYFLS-DLNLQISARF---LNII 177
           Q +  ++ I     + ++  I +    I ++     ++  +  D       R      I 
Sbjct: 149 QEREQIEDIELDLPIDIDADIELNNANIALLPNGFKELIKVDADGTAGYRYRSNEEQEIN 208

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
             L +  +  S+  +G  N  + ++  ++  +  A  +  +L   L       +++   N
Sbjct: 209 YDLDVSLLNSSIAVQGETNIKSFQTQAELMISQLALPELAALIPNLPVTLKSGLVESNLN 268

Query: 238 LFWNE----KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
           +        +    +G F ++   + L  L++     +L      ++  V+ +  +    
Sbjct: 269 INVPSLEEIEGTEGNGNFQLSNVQAGLEALKVP---IKLDLALDFNNKTVQFNETRFSL- 324

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330
                     +               +G     D+N 
Sbjct: 325 ---------GEFVTDIKGSLNWQ---DGYNIDVDINP 349


>gi|188579664|ref|YP_001923109.1| hypothetical protein Mpop_0396 [Methylobacterium populi BJ001]
 gi|179343162|gb|ACB78574.1| conserved hypothetical protein [Methylobacterium populi BJ001]
          Length = 1179

 Score = 84.2 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 103/313 (32%), Gaps = 13/313 (4%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R +L  L     +VLV A  VP FIDW+  R   +R  T  +G     +G I + +LP 
Sbjct: 1   MRDILTALAGAVVLVLVAALAVPPFIDWSAHRALIDRALTDSLGAGARSEGAIDLRLLPS 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P +    +R+  ++          +       PLL GE+R     I++  L   +S + +
Sbjct: 61  PHLRLARLRLGAEDG--PALDARSVDAEIALAPLLKGEVRFVQTAIERADLTLPVSDEAL 118

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
               + ++       ++++ + ++   +             +  NL++ A  L     + 
Sbjct: 119 LLPREPQALRRD---IVIDDLRIRRLSLATARTGEAPQAQFTAENLRLRAPALAGPWLVE 175

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFW 240
             +         +    +   + K+T          +  ++   P   P      GN   
Sbjct: 176 GTAKGSPFHLATSTAGGDGGVSLKLTGGGDTMPRLELDARLTFKPEDAPG-----GNRAH 230

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300
               P   G   +       +    +     L+  F+      +    +++      +  
Sbjct: 231 RGLVPEAEGTARLT--VGPPVQPAGAVLPLTLAAKFEARGPVAQAKTVEIELDPGGKAAR 288

Query: 301 EDNKTKVSQDEEN 313
                ++   E  
Sbjct: 289 LSGSGRLDLREAR 301


>gi|254558834|ref|YP_003065929.1| hypothetical protein METDI0195 [Methylobacterium extorquens DM4]
 gi|254266112|emb|CAX21864.1| conserved hypothetical protein; putative exported protein
           [Methylobacterium extorquens DM4]
          Length = 1175

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 110/322 (34%), Gaps = 31/322 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R  L  L     +VLV A  VP FIDW+  R   +R  +  +G     +G I + +LP 
Sbjct: 1   MRDSLTALAGAVVLVLVAALAVPPFIDWSAHRALIDRTLSDSLGAGARSEGAIDLRLLPS 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P +    +R+  ++        + +       PLL GE+R     +++  L   +S + +
Sbjct: 61  PHLRLARLRLGAEDG--PALDAQAVDAEIALAPLLKGEVRFVQTSVERAGLTLPVSDEAL 118

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
               + ++       ++++ + ++   +  +          +  NL++ A          
Sbjct: 119 LLPREPQTLRRD---IVIDDLRIRRLTVATLRTGEAPQEQFAAENLRLRAP--------- 166

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
             ++ G  +AEGT         F +  +    + ++SLK+       P  ++L   +   
Sbjct: 167 --ALAGPWLAEGTAKGS----PFHLATSVAGSDGSLSLKLTGGGDTMP-RLELDARITLK 219

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS----------RLSGNFKISDGNVRISRYKLQ 291
            +    +                L+               L+  F      V+    +L+
Sbjct: 220 PEDASDADRVRRGLVPEAEGTARLTVGPPVQPAGAVLPLTLAAKFASRGPLVQAETVELE 279

Query: 292 SILPNSSTDEDNKTKVSQDEEN 313
                 +       ++   E  
Sbjct: 280 LDPGGKAARLSGNGRLDLREAR 301


>gi|218778090|ref|YP_002429408.1| hypothetical protein Dalk_0231 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218759474|gb|ACL01940.1| protein of unknown function DUF748 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 1096

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 58/416 (13%), Positives = 122/416 (29%), Gaps = 62/416 (14%)

Query: 2   LRRVLIGLGFLF-SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           L+++ I +  L  +  ++G   VP  I W        R      G+K +++    +   P
Sbjct: 13  LKKIFIIILGLVTAYTIIGFVLVPAIIKWG-----VVRIIEKDYGRKASIE---DVAFNP 64

Query: 61  F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSS 118
           +  ++      I   +  +      GLS+  +    + S    V ++ ++ P +   ++ 
Sbjct: 65  YGLTLRVDGFTILDPD-ETAFVSFGGLSVDVKVWDSITSMAAVVGEVDLENPLVRITMNE 123

Query: 119 KGVSNWFQRKSTMDM---------------IHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            G  N+       +                     L+ + V GG I  +D++ D  + + 
Sbjct: 124 DGGFNFADLIPASNPETNAPEENNEEQEKKPPRFSLDILSVSGGNIVFVDKQKDATHKII 183

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
           DL + +             D +   V      + +      +  +         S  I  
Sbjct: 184 DLFVAVRGLSGLP------DDLDNPVEINLEASINGAPLTVEAESLIFDPKLKSSAGISF 237

Query: 224 -FPLAYPIII---DLFGNLFWNEKQPIYSG----------------VFSVAGDFSKLLNL 263
               A P       + G      K  +Y+                    V+       + 
Sbjct: 238 RDISAAPYKAYIPAIEGRTLVTAKTGVYAAIQYSMEESGAHNLAVRNLKVSDTLLAWEDP 297

Query: 264 ELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
               ++  + G ++IS G   +    L                VS D   L    +NGA 
Sbjct: 298 FKDPEQPEIRGPYQISLGKFSLGLDVLVKDPAVMDVLVK-DADVSLDNLQLFA--QNGAL 354

Query: 324 SMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                 +    E  + ++ N D+                 +   E  +  +  +MI
Sbjct: 355 ------KLAGVEHFDVQDANADMAALKASVGAVNTNGGWFAAALEPTKRINITRMI 404


>gi|255007793|ref|ZP_05279919.1| putative outer membrane protein [Bacteroides fragilis 3_1_12]
 gi|313145498|ref|ZP_07807691.1| outer membrane assembly protein [Bacteroides fragilis 3_1_12]
 gi|313134265|gb|EFR51625.1| outer membrane assembly protein [Bacteroides fragilis 3_1_12]
          Length = 837

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/346 (11%), Positives = 97/346 (28%), Gaps = 41/346 (11%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGG---IKIHI 58
           +++ L     +  V+L+  F +P       FR   E        K +  +     + I +
Sbjct: 1   MKKGLKITTIVIGVILILMFLLPF-----AFRGKIEGIVKAEGNKMLNARFDFSSLDISL 55

Query: 59  ---LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112
               P  SV   D  +            K   ++       L       V  + +    L
Sbjct: 56  FRNFPKASVTLNDFWLKGTGAFENDTLVKAGEVTAAINLFSLFGDSGYDVSKVSVTDTWL 115

Query: 113 NFYLSSKGVSNWFQRKSTMDM-----------IHNVILEKIHVKGGRIKIIDQESDQVYF 161
           +  +   G +NW   K                   V L++  +K   +   D++S     
Sbjct: 116 HAIVLPDGKANWDIMKPDSATVSETSESSESSPFRVKLQRFVIKNMNVVYDDRQSVMYAD 175

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221
           + + N   S    +  + L++++   ++  +  G     ++      +  A        +
Sbjct: 176 IHNFNALCSGDLGSDQTLLNLEAETEALTYKMNGIPFLSQANIYAKMDVDADLVHHKFTL 235

Query: 222 QLFPL-AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280
           +        I   + G +   +         + +    K +   + A             
Sbjct: 236 KKNEFCLNAIKAGIDGWVELKDPAIDMDLKLNTSEVGFKEILSLIPA------------- 282

Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
             +    +K       ++ +   K  +  D     +   +   +M 
Sbjct: 283 --IYSKEFKNLKTDGTATLEATAKGVLQGDTVPRFDVRLSVKNAMF 326


>gi|218528414|ref|YP_002419230.1| hypothetical protein Mchl_0365 [Methylobacterium chloromethanicum
           CM4]
 gi|218520717|gb|ACK81302.1| conserved hypothetical protein [Methylobacterium chloromethanicum
           CM4]
          Length = 1175

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 110/322 (34%), Gaps = 31/322 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R  L  L     +VLV A  VP FIDW+  R   +R  +  +G     +G I + +LP 
Sbjct: 1   MRDSLTALAGAVVLVLVAALAVPPFIDWSAHRALIDRTLSDSLGAGARSEGAIDLRLLPS 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P +    +R+  ++        + +       PLL GE+R     +++  L   +S + +
Sbjct: 61  PHLRLARLRLGAEDG--PALDAQAVDAEIALAPLLKGEVRFVQTSVERAGLTLPVSDEAL 118

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
               + ++       ++++ + ++   +  +          +  NL++ A          
Sbjct: 119 LLPREPQTLRRD---IVIDDLRIRRLTVATVRTGEAPQEQFAAENLRLRAP--------- 166

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
             ++ G  +AEGT         F +  +    + ++SLK+       P  ++L   +   
Sbjct: 167 --ALAGPWLAEGTAKGS----PFHLATSVAGSDGSLSLKLTGGGDTMP-RLELDARITLK 219

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS----------RLSGNFKISDGNVRISRYKLQ 291
            +    +                L+               L+  F      V+    +L+
Sbjct: 220 PEDAADADRVRRGLVPEAEGAARLTVGPPVQPAGAVLPLTLAAKFASRGPLVQAKTVELE 279

Query: 292 SILPNSSTDEDNKTKVSQDEEN 313
                 +       ++   E  
Sbjct: 280 LDPGGKAARLSGNGRLDLREAR 301


>gi|153011244|ref|YP_001372458.1| AsmA family protein [Ochrobactrum anthropi ATCC 49188]
 gi|151563132|gb|ABS16629.1| AsmA family protein [Ochrobactrum anthropi ATCC 49188]
          Length = 649

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/318 (10%), Positives = 87/318 (27%), Gaps = 45/318 (14%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID--QKEDGSF 79
            VP  +     R    ++ +   G  + ++   ++ + P        + +     +    
Sbjct: 27  VVPFIVSTDAIRIRVAQEISAWTGYSVELRQAPRLKVFPVLRASLNGVTLSKLTDQGQKP 86

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF-------------YLSSKGVSNWFQ 126
               + + +    L  + G I   +  I +PH+N                +S G      
Sbjct: 87  LMSADRIDVELSPLDAIMGHISFSETQIVRPHVNLDGPISNFSQLLDAIANSNGRLGTAI 146

Query: 127 RKSTMDMIHNVI------------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
           R                         ++ V+ G I     +S+      +       +  
Sbjct: 147 RAQRALQKDGSGDNAQATQQASQPFGRVVVRDGTIAFNRPDSEPEITSDE-------QIT 199

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIID 233
           ++ + L       +   +G+  +  + S F +TA          +  +     A P+ + 
Sbjct: 200 DVNATLEWPRTSSAATLKGSAKWREETSQFSLTAAQALPLLAGGTSDVTASLTANPLSLT 259

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---------RLSGNFKISDGNVR 284
             G    ++ +  + G  +            LS              L      +   ++
Sbjct: 260 FQGKANISKDRF-FEGDLTAKTPSLSGAVRWLSLPPIAGSAEIGAFSLESTITATPKRLK 318

Query: 285 ISRYKLQSILPNSSTDED 302
            +  ++ +    +    +
Sbjct: 319 FADVEMTASDSPAKGVIE 336


>gi|322436779|ref|YP_004218991.1| AsmA family protein [Acidobacterium sp. MP5ACTX9]
 gi|321164506|gb|ADW70211.1| AsmA family protein [Acidobacterium sp. MP5ACTX9]
          Length = 556

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 24/268 (8%), Positives = 69/268 (25%), Gaps = 33/268 (12%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE--DGSFESKIEG 85
           +   ++       +  +G+ + +   + +++LP PS   ++  I +          +   
Sbjct: 58  NVNRYKRQIVTSISTSLGRPVHID-SVSLNLLPLPSFTLENFVISEDPAFGAEPVLQANE 116

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN-----------WFQRKSTMDMI 134
           +        L    +    + +D P +N      G  N                +     
Sbjct: 117 VRANLRVSSLWRRRVEFSRIALDSPSVNLVHLPDGRWNLESILLQASRMPAAPTAQKKAG 176

Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI---SARFLNIISPLSIDSIKGSVIA 191
                  I   G R+ +          L++ +  +        ++               
Sbjct: 177 TAPRFPYIEATGARVNLKMGLEKMPISLTEADFALFLPEPNEWHLRLKTHFVRTDAPPTD 236

Query: 192 EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
            G    +        T    +   A+ + +       P+     G + W           
Sbjct: 237 TGILRVEG-------TLGRASTLAAVPVDLHADWETAPL-----GAVSWVLMGRDA---- 280

Query: 252 SVAGDFSKLLNLELSAKKSRLSGNFKIS 279
            + G+ +    +  +   + L  +  + 
Sbjct: 281 GLRGEMNLTAAVTGTVGSNNLDTHLTLQ 308


>gi|332701659|ref|ZP_08421747.1| AsmA family protein [Desulfovibrio africanus str. Walvis Bay]
 gi|332551808|gb|EGJ48852.1| AsmA family protein [Desulfovibrio africanus str. Walvis Bay]
          Length = 1271

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/368 (11%), Positives = 97/368 (26%), Gaps = 57/368 (15%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81
            +P F+D    +   E      +G  +A++G + + +LP P +    + +    DG    
Sbjct: 24  LLPHFVDTRQVKARLESVMADALGMPVAIRGELGLRLLPTPELRLGGLELGHGADG-PLV 82

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV---- 137
               + +      LL  E+ + ++ +D   L     + G  N    +     I       
Sbjct: 83  SCREVRLSLSLSRLLRREVLLRNVVLDDIVLRLSRGTDGRLNLQLPQILAVRIEGAPGGE 142

Query: 138 -----ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL----------SI 182
                 +  + +  G + ++D  +     L  L+ +       +                
Sbjct: 143 RFTFQGVNNLSIT-GSLLLVDASTGMRLELERLHARYRKGREQLFLSGALRMAWPEQYRF 201

Query: 183 DSIKGSVIAEGTGNF---------------------DNKRSAFKITANFPAKNKAISLKI 221
             ++ SV A G                         D       ++        A + + 
Sbjct: 202 PRLEASVNAVGGLKLEDRVLRVQGFDVQAGLVLQARDGTARTGTLSTRLDLDTAAGTFRT 261

Query: 222 -QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS------- 273
            +L      + +           +P+ S         +  L + L      ++       
Sbjct: 262 RELEAALGELRLTGSARGKDILSEPVLSASLQAEAGDAAALAMALGLPTPTVAYGRQTPV 321

Query: 274 ---GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330
                 +     + + + +L         +   +  +            N A    D   
Sbjct: 322 QAGLELEARSDGLDVRKLRLSLGES----EIAGQVSLLGWAAPAWKIELNAARLNLDELR 377

Query: 331 TDFFEEEE 338
              + E E
Sbjct: 378 PAVWPEAE 385


>gi|317403444|gb|EFV83955.1| hypothetical protein HMPREF0005_01938 [Achromobacter xylosoxidans
           C54]
          Length = 1226

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 94/287 (32%), Gaps = 22/287 (7%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LPF 61
           +      ++ VV +G   V  ++      +R   E  A+  +G ++A+ G I+       
Sbjct: 25  LFWVALTVYGVVAIGLLGVRYWVLPRVDQWRPQIEAYASQALGARVAI-GAIRADWQGLN 83

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P +    +++   +       +  +S    +  L +    +  + ++QP L     +   
Sbjct: 84  PKLELSSVQVYD-DVPEPVLSLPSVSAVLAWRSLFTLSPTLLRLRVEQPDLTLRRDAANR 142

Query: 122 SNWFQR------KSTMDMIHNVIL------EKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQ 168
                +            +++  L       ++ ++G RI+  D+        L++++L 
Sbjct: 143 LWVAGQGIDLNASDHQSDLNHPALRWLTGQREVQIRGARIRWQDELRQAPDLVLNNVDLL 202

Query: 169 ISARFLNIISPLSIDSIKGSVI-AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
           +    L+    L  D         +  G F+    +    +      +  +      PLA
Sbjct: 203 VRNGSLSHRFVLRADGDPVLARKVDLRGEFNRSLFSANAASPANWSGQLYAALDDAEPLA 262

Query: 228 YPIIID---LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR 271
           +   +    + G +       +  G F+          ++ SA    
Sbjct: 263 WAPWLSPPPIKGRISTRAWLQLDHGKFTTLTADVATRGVDWSAAPGA 309


>gi|254410411|ref|ZP_05024190.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
 gi|196182617|gb|EDX77602.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
          Length = 1925

 Score = 83.4 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 38/363 (10%), Positives = 115/363 (31%), Gaps = 19/363 (5%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64
            LIG+  +  V + G      +           R  T ++ + + +    +  +     +
Sbjct: 32  WLIGISIILLVGIAGGMGFAWYFIQQMLAPLVARNLTQLLQRPVEIGEVERFSL---TGL 88

Query: 65  FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS-N 123
            F    +   +     + IE + ++ + LPL+       ++ + +P +    +  G    
Sbjct: 89  RFDSAALPPTDTEPDRASIEAVEVQYDLLPLIFDRRLELNVTLIEPDVYIEQAVDGSWMP 148

Query: 124 WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQES-DQVYFLSDLNLQISARFLNIISPLSI 182
              ++        V L+++ V+   ++++ + +  +      + +   +      + +  
Sbjct: 149 LELKEQGEPGPIEVDLQQLGVRNAEVQLVPRSTEGKQQSPVAIAIPQGSSQFLQDNDIIR 208

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF-GNLFWN 241
             ++G + + GT N   +   F  +A     +   ++K        P+ +D+  GN+  +
Sbjct: 209 FDVQGEIASGGTFNLQGEHL-FPTSATHLQVDGQ-NVKASTLDRLIPLPLDVNAGNVGGD 266

Query: 242 -----EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
                +       + +   +       +L    +  +G  +  +  +R+     Q     
Sbjct: 267 LEITIKPDQPLQFLGNATLNNVTAQVPQLPQAFANTNGRLRFKETTIRLEDVTTQFGQI- 325

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356
                +    +        N +              F  EE     + ++K   +     
Sbjct: 326 -PVTANGSVDLETG----FNLTAQTQAVQIKTVLQTFNLEETPVPLSGEVKAALLVTGSL 380

Query: 357 KKE 359
            + 
Sbjct: 381 TQP 383


>gi|154247686|ref|YP_001418644.1| AsmA family protein [Xanthobacter autotrophicus Py2]
 gi|154161771|gb|ABS68987.1| AsmA family protein [Xanthobacter autotrophicus Py2]
          Length = 654

 Score = 83.4 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 90/297 (30%), Gaps = 28/297 (9%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64
           V I +G + + +LV    +PL +   + R           G+K+ + G   + + P P V
Sbjct: 29  VAIVIGAITAALLVVTAALPLVVPGAELRRIAVHALAGSTGQKVVILGEPALRLFPSPRV 88

Query: 65  FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124
               +        S     E +  R +   LL+G + V D+ ++ P L       G    
Sbjct: 89  VLGKVSFPLPSGQS--LDAENVVTRLDIWHLLAGRVEVDDVIVEHPTLVLT---GGGLTP 143

Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
               + +    +    ++ +  G I    +       +S L   +               
Sbjct: 144 ALAVAPIFAAAHWP--ELRIVDGTIAWRSEGGLTRELVSGLTANLDRVVAGRG------- 194

Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKN-KAISLKIQLFPLAYPIIIDLFGNLFWNEK 243
               +      ++ ++R    +  +  A          ++   A        G       
Sbjct: 195 ----LALGAAFDWRDERVTVNLVLDDAAGFLNGTPSPARVVLAATGAEARFQGRAAL-GT 249

Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRISRYKLQS 292
            P+ +G  S   D  + L      +           LS +  + DG + ++   L  
Sbjct: 250 APVLTGTLSAEADALRDLLDWAGIEPPTRGGLGPFALSTHLALEDGGLALTDASLDL 306


>gi|33602208|ref|NP_889768.1| hypothetical protein BB3232 [Bordetella bronchiseptica RB50]
 gi|33576646|emb|CAE33724.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
          Length = 1219

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/390 (10%), Positives = 110/390 (28%), Gaps = 41/390 (10%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI 58
           +LR +   +  ++ V+ V    +  ++      +R   E+ A+  +G ++A+   +    
Sbjct: 23  ILRLLFWSVFAIYGVLAVAFLGLRYWVLPRADQWRPQIEQYASQALGSRVAID-SLSADW 81

Query: 59  -LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
               P +    +RI           +  ++    +  +L     +  + ID   L     
Sbjct: 82  SGLNPRLNLSGVRIYD-HQADPVLSLPSVAAVLGWRSVLKLSPTLQSLRIDGADLLVRRD 140

Query: 118 SKGVSNWFQRKSTMDMI------------HNVILEKIHVKGGRIKIIDQE-SDQVYFLSD 164
           S        +   +                     ++ ++G  ++  D+        L  
Sbjct: 141 SADRLWVAGQSIDLAAPSDHGFTESPALRWLARQRELALRGVTLRWQDEARQAPELRLDG 200

Query: 165 LNLQISARFLNIISPLSID---------SIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215
           L+L +    L+    L +          S++G +         +  +++        ++ 
Sbjct: 201 LDLLVRNGVLSHRFSLRVRPPAQLAAKVSLRGELNRSLFARDGSNPASWSGQLYAEVQDA 260

Query: 216 -AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL-----LNLELSAKK 269
              +    +   A          L  +  +         A            ++ + + +
Sbjct: 261 EPAAWAPWVAMPAAQGRYAARAWLQLDHGKFT-DLTMDAALRGLNWRAGQSASVSVDSAQ 319

Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL---NFSENGAESMH 326
            RL G        ++ S   L      +      +          +     + + A+   
Sbjct: 320 WRLQG---APGDLLQFSDLPLARSADGAGVSVTGQADGLWLNLPEIFEHPLALDRAQLDA 376

Query: 327 DLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356
            L E    +      +   L   D+  +++
Sbjct: 377 SLTEPAG-QPLTLNLRRLQLANPDLDATLH 405


>gi|307299852|ref|ZP_07579637.1| AsmA family protein [Sinorhizobium meliloti BL225C]
 gi|306904741|gb|EFN35324.1| AsmA family protein [Sinorhizobium meliloti BL225C]
          Length = 1007

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 49/380 (12%), Positives = 124/380 (32%), Gaps = 27/380 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR ++ L  + ++ +     +P  I     R +  RQ +   G  IA  G + +   P+
Sbjct: 1   MRRFILSLLGVAALAVAAIAVLPSLISSDWVRAELGRQLSAATGSSIAFNGPVNLSAFPY 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS--- 118
            +V  +D+ +  + +G   ++   +S       L S  + +  + +D+P +     +   
Sbjct: 61  LAVVAEDVTLSAEAEGIT-AEFAEVSGSVALSSLWSDRLHIKQIALDRPVIVLEEKAADE 119

Query: 119 --------KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
                       +     + +  +    +E + +  G   I     D    +SD+ L +S
Sbjct: 120 AASTADRGNETGSGDPLPALVAFLERSAIESVSITSGTF-IRRSAEDPEEVVSDVELTLS 178

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
           A  ++    LS  +  G    + +          +        +  ++++    P     
Sbjct: 179 APDIDDEFSLSASARMGGRSYDTSFTIS----TLRSLLERQPADITLAVEADPAPAPGMS 234

Query: 231 IIDLFGNLFWNEKQ--PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR-ISR 287
            ++  G +  N      I  G          L  L +  +++R   + +    ++     
Sbjct: 235 SLEASGQVTLNANGSYQIRGGEVEAGEQAFSLNALFVPGQRARFLLDLEADRLDLTPFMD 294

Query: 288 YKLQSILPNSSTDEDNK-TKVSQDEENLLNFSENGAESMH------DLNETDFFEEEEKK 340
              ++    + +        +        + S N A  +       D++ +   ++ E  
Sbjct: 295 AAPEASQSGAPSAGTANPANLQFLAGFDADMSINAAALVLGEISASDVSFSAALKDGELA 354

Query: 341 NKNDDLKKDDIQYSVNKKEE 360
            +   L  D    + N    
Sbjct: 355 AELGHLGIDAGSLAANVATN 374


>gi|86159908|ref|YP_466693.1| hypothetical protein Adeh_3490 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776419|gb|ABC83256.1| protein of unknown function DUF748 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 953

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 41/315 (13%), Positives = 102/315 (32%), Gaps = 24/315 (7%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-F 61
           RR  +  G +   +LV           +  R    +QA+  + + + +    ++ + P  
Sbjct: 11  RRRWLRAGAVLGALLVLYTAFGFLAAPSLVRRIAVKQASAALHRPVEIN---RVRVNPLA 67

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            SV  + +R+   +     +  + L +R   L LL+G++   ++ + +P L+  L  +G 
Sbjct: 68  LSVTVEGLRVKHADGA-PFAAWDSLHVRLAPLRLLAGDLGFAEIRLVRPALHVGLDPRGA 126

Query: 122 SNWFQRKSTMDMIHN--------------VILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
             +    +                     + + ++ V+  R+   D      +  +   L
Sbjct: 127 LTFEDLLAGDPEAAEPGAPAAPEKEGRLGLSIGRLAVEEARVVFRDATRKPAFETTLGPL 186

Query: 168 QISARFLNIISPLSID-SIKGSVIAEGTGNFDN--KRSAFKITANFPAKNKAISLKIQLF 224
            +               S  G+  +  T  +    + +  + +     +   +       
Sbjct: 187 TVRLESFRTRGGGDSPYSFAGTTESGETFRWTGTVRSAPLRSSGTLAFERIQLPKYAPYI 246

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
               P+ +   G L       +  G    V       L +E  A   R   +  +    V
Sbjct: 247 HDQAPVDL-AEGVLDLETGYELAWGADARVLRTSGGKLTVERLALAPRGERDAPVRLPRV 305

Query: 284 RISRYKLQSILPNSS 298
            +S  ++ ++   +S
Sbjct: 306 EVSGIRVDALAKEAS 320


>gi|226941062|ref|YP_002796136.1| transmembrane protein [Laribacter hongkongensis HLHK9]
 gi|226715989|gb|ACO75127.1| Probable transmembrane protein [Laribacter hongkongensis HLHK9]
          Length = 1274

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/323 (12%), Positives = 95/323 (29%), Gaps = 39/323 (12%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGL 86
           +   ++   E++ +  +G  + + G +   +  P  ++    + ID    G +  ++  L
Sbjct: 49  NLGTYKPQLEQELSAALGHAVHI-GSLTGSLQGPVLTLALHQVEIDNPNPGGYPLQLAEL 107

Query: 87  SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV-------SNWFQRKSTMDMIHNVIL 139
           S R  +  L+S   R   + +  P L+   +  G         +  +   +  +   +  
Sbjct: 108 SARPSWKSLISWSPRFTRITLTAPELSLRRARDGHLYLNGIVLDGSRSSDSQMLDWLLEQ 167

Query: 140 EKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD 198
           ++I ++  R++  D+        L+  NL +          L+  + +G          D
Sbjct: 168 DEIRIEQARLRWRDEAMGLAELDLTQGNLSLVQGLFGHRLTLTAHAPEGW--------LD 219

Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFS 258
             R       +     +    K  L      +  D    L W    P   G   V   F+
Sbjct: 220 AFRFQMTWRGDRLENWRTWRGKFALDVGGANL-ADWRRTLAWLAHMPAGQGGARVEASFA 278

Query: 259 KLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ---SILPNSSTDEDNKTKVSQDEENLL 315
                          G F        +    L+   +    +  +   + ++    +   
Sbjct: 279 --------------DGQFTSGQARFDLKNVVLRPEAAGPLVAVPNLSGEVELKPGADGGS 324

Query: 316 NF---SENGAESMHDLNETDFFE 335
                +         L +   F 
Sbjct: 325 ELLARNLVAQTIDGKLFDRAEFR 347


>gi|307153271|ref|YP_003888655.1| hypothetical protein Cyan7822_3431 [Cyanothece sp. PCC 7822]
 gi|306983499|gb|ADN15380.1| protein of unknown function DUF490 [Cyanothece sp. PCC 7822]
          Length = 1817

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 48/398 (12%), Positives = 121/398 (30%), Gaps = 33/398 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR+ +GLG +  V + G      F+         E++ +  + + + +     I +    
Sbjct: 40  RRLWLGLGSVLLVSITGGLVYGRFVIEQQLAPILEKELSDFLNRPVKIGSVEGISL---T 96

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            V F    I        +  +  + +    +   S      D+   +P++       G  
Sbjct: 97  GVRFGKSEILPTPTDPAKISLAEVDVSFNPVKFFSHSQLTLDVKAIRPNIYLEQGVNGSW 156

Query: 123 NWFQRKSTMDMIHN---VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN---- 175
                            V LE +      + +  + + +    S + L + +   N    
Sbjct: 157 LMTPFDVIKSNGSQEGAVELESLQFINADVVLRARSATKQLN-SAVKLFVPSLKTNFANQ 215

Query: 176 ----IISPLSIDSIKGSVIAEG-----TGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
                   + + +  G     G     TG  +       + A       A+ L ++   +
Sbjct: 216 GRIVDFVGVGLLAKGGKAKLSGVAKTNTGEINLVVLGHSVQAADLKNLIALPLNLKNGEV 275

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
              + + L       ++ P   GV ++          +L    ++ +G  + +D  +++ 
Sbjct: 276 GGNLEVHLK-----PKQLPSLKGVATL--ANVTAQIPQLPQAFAQTNGLLRFNDHQIKLE 328

Query: 287 RYKLQSIL----PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342
               Q        N + +      +S          +  +      +      + + + +
Sbjct: 329 GVTTQFGKIAAVTNGTINLKGNYALSAKTLP-FQVQDALSTLKIPASSLPISAQLQSQFQ 387

Query: 343 NDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMIL 380
             +   ++ Q S+N    K    DK N ++F  +  + 
Sbjct: 388 -VNGTLNNPQVSLNLVTTKPAVIDKINFQSFQANLQLF 424



 Score = 39.9 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 44/332 (13%), Positives = 88/332 (26%), Gaps = 38/332 (11%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHI------------LPFPSVFFKDIRIDQKEDG 77
             F  +   Q    +G    V G +   +            LP  ++    + I Q    
Sbjct: 612 NQFVPNLPHQLNGRLGGNFTVTGDLNSTLADIQGSGQAHFNLPSGTIKANQLEIHQGFWQ 671

Query: 78  SFESK--IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH 135
           +      ++  ++       L G+++   + ++    N     + +              
Sbjct: 672 ATLKTDNLQLANLIPNLSTPLRGKLQG-QLSLEG---NLESRLEDIQGTGYGSLI-SSAG 726

Query: 136 NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS--VIAEG 193
            +  + I +KGG+       + +   L+  + Q        ++     +      + AEG
Sbjct: 727 TIAAKHILIKGGK--FESLITPEQVQLASFSPQFKGFLGGKLNISGNINNLNPTAIKAEG 784

Query: 194 TGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPIIIDLFGNLFWNEKQP---IYSG 249
             NF    S                L  +Q     +     L  +L              
Sbjct: 785 NLNFSQGLSLINRALTTTVAWSGKRLDILQATASDFNAKGFLEMDLSSKNPLSAINKLDL 844

Query: 250 VFSVAGDFSKLLNLELS-AKKSRLSGNFKISDG----------NVRISRYKLQSILPNSS 298
             S  G   K L    S A++  + G                 +  IS   L     N  
Sbjct: 845 NVSAKGFDLKQLTASFSQAQQWNIGGRLNFEGKIAGTPQKPHIDGAISLNNLSMAHENFE 904

Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330
            +      +  D    L  + +  +    LNE
Sbjct: 905 PELKGAISLVPDSGVKLQLAGDRDKIELSLNE 936


>gi|119475520|ref|ZP_01615873.1| AsmA [marine gamma proteobacterium HTCC2143]
 gi|119451723|gb|EAW32956.1| AsmA [marine gamma proteobacterium HTCC2143]
          Length = 1175

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 84/312 (26%), Gaps = 14/312 (4%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           R L     + +++++G F+          R   E   T I  ++  + G     +     
Sbjct: 23  RTLTVTLVVSALIVIGGFSYLAL-KPNQLRPILEHLLTSITERQFQIAGDFDFQLGKELL 81

Query: 64  VFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           +  K +       G      +I  + ++     L S  + +  + ++  HL F     G 
Sbjct: 82  IHAKFVTWANASWGSAENMLEINSIDLQINLASLFSPPVIISHVNVENAHLEFEWDDDGR 141

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGR----IKIIDQESDQVYFLSDLNLQISARFLNII 177
            NW    +  D   +   +            + +     + V       +  S   + +I
Sbjct: 142 MNWMLFDTDTDTDTDTDTDTDDGDPSAHPLPLLLGITNLNSVELAFKAPILTSPLLIKVI 201

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK---NKAISLKIQLFPLAYPIIIDL 234
           S         +++       +N+           ++      +S+ + L      + +  
Sbjct: 202 SAKQELDQDNNIVIRSKALTNNRPFTLDGNMGRFSELVLAGEVSMDLTLESEFSALNVKA 261

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA---KKSRLSGNFKISDGNVRISRYKLQ 291
             +   N     +   +        L    L         L       +G +        
Sbjct: 262 DVDDLRNLSGANFDIDWQGKEIADTLEAFNLPIVTTGPVALKAKLDNQNGQLN-GHLDGS 320

Query: 292 SILPNSSTDEDN 303
               + + D   
Sbjct: 321 VGDLSVAGDLKA 332


>gi|256828177|ref|YP_003156905.1| hypothetical protein Dbac_0362 [Desulfomicrobium baculatum DSM
           4028]
 gi|256577353|gb|ACU88489.1| protein of unknown function DUF748 [Desulfomicrobium baculatum DSM
           4028]
          Length = 1330

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/285 (10%), Positives = 78/285 (27%), Gaps = 27/285 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           + + I    +     +G   +P    +         +    + ++I+V G I+++     
Sbjct: 16  KTLAITTCCVALYAAIGFLLLPRIASY-----VLVEKVAPALSRQISV-GEIRVNPF-AM 68

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +    D  I + ++       + L    E   +    + V +  +D P ++  L   G +
Sbjct: 69  TADVSDFVIREPDESGEFVAFDRLHANLELSSIPRLALVVREARVDGPRIHIRLGQDGQT 128

Query: 123 NWFQRKSTMDMIH----------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
           N+                      +I+E   +  G +   DQ     + +  +   +   
Sbjct: 129 NFSDLTVGSAEPGPERTGEPMLLPLIVEPFTIGNGTLTFEDQARGVSHVVDQIQFNLP-- 186

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
                        +  +    +   +      +      + +      + +  LA P   
Sbjct: 187 ----RFSSRKKDWETFMTPTLSFRANGAPFNLEGRTTPFSNSLKTEFDLNVIDLALPQYW 242

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
                    E   +  G  ++          E +     L G   
Sbjct: 243 ---AYAMARENLQLSKGFLNLE-SKLAFEQFEDALPTFSLQGTIT 283



 Score = 38.3 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 33/319 (10%), Positives = 91/319 (28%), Gaps = 29/319 (9%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           ++  +DI +   +DG             + + +L+  + +  + ++QP+L       G  
Sbjct: 281 TITGRDIEL--VDDGEPVLTAARTEAVMDDISILNLRLGLSSVVLEQPYLRVVRHKDGSL 338

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
           NW        +  +  ++           I Q +     + D N+          S  + 
Sbjct: 339 NW----MHYFVPPDAPVDSPANATAPSTPIAQNASAPITVEDGNIAGGDPNAANASAANA 394

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242
           ++   +V    + N                   A     +   L  P I  + G + + +
Sbjct: 395 NTTVAAVTGNASMN---------EALEIDNATAARRDTARTLLLQVPTIRLVDGRVHFRD 445

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
           +   ++           + +L+ S   + ++G   +             +    S     
Sbjct: 446 ETTSFTKEIE--SLDLTITDLDTSLNATSVAG---LQMRTADGEAIDTNATFSVSPFRVL 500

Query: 303 NKTKVSQDEENLLN--------FSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354
              +V   +              +   A++   +      E+   + ++  L+  D+   
Sbjct: 501 ALIEVRDLDIPSYASYFKDALPLTLATAKADAGIRFAIDGEDRALRLEDSSLEIRDLSLK 560

Query: 355 VNKKEEKDNSHDKENQENF 373
                  +    +   +N 
Sbjct: 561 A-ADGAGEIKLGRAALDNI 578


>gi|209521475|ref|ZP_03270181.1| conserved hypothetical protein [Burkholderia sp. H160]
 gi|209498081|gb|EDZ98230.1| conserved hypothetical protein [Burkholderia sp. H160]
          Length = 1416

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 89/307 (28%), Gaps = 25/307 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTV------PLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55
           LRR L  L  L  V+   A  +       +      FR   E   +  +  +  + G + 
Sbjct: 27  LRRTLRVLATLALVLYFIATGLFLGLRYVVLPRADQFRPRIEATVSDKLRTQFTI-GRLA 85

Query: 56  IHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            H   F P +   ++ I   +       I   +    +  L      +  + +DQP +  
Sbjct: 86  PHWSGFQPGLDITNLVIRDHDG-QPALTIPHATAAVSWRSLWEFHPALSSLIVDQPDVLV 144

Query: 115 YLSSKGVSNWFQRKSTM-------DMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLN 166
             S  GV +                    +  + I V+GG ++  D    +    L D+ 
Sbjct: 145 SRSEDGVLSVAGVPVPTRHSGNDVLSTWLLRQQAIVVRGGVLRWRDATRKEPELALRDIR 204

Query: 167 LQISARFL----NIISPLSIDSIKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAISL 219
           + I          + +P     +KG +    +               +         + L
Sbjct: 205 IAILNDGHEHRMALQAPPDGQVLKGPLDFRTSFRHAPLSAIGKPINWSGQAYVSTGPVDL 264

Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
                 + +PI     G +          G  + A       ++ L  + ++      ++
Sbjct: 265 PTLARYVDFPIE-TFAGRVDNAIWIDFTEGRMTQASGQLNGNDVALRVRPTQPKLLLPVA 323

Query: 280 DGNVRIS 286
               R+ 
Sbjct: 324 HFLWRLG 330


>gi|167753537|ref|ZP_02425664.1| hypothetical protein ALIPUT_01814 [Alistipes putredinis DSM 17216]
 gi|167658162|gb|EDS02292.1| hypothetical protein ALIPUT_01814 [Alistipes putredinis DSM 17216]
          Length = 838

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 99/303 (32%), Gaps = 28/303 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-P 60
           ++ +L+ LG +  +V+     +P        +   E+ +  +VG++I ++   K+     
Sbjct: 5   IKILLVTLGIIAVLVVTTILLLPPI-----AKNYLEKHSKELVGRQITIE---KLRFNVL 56

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    I + + +D +  + +     R   LPLL   I +  + ID+P+LN Y     
Sbjct: 57  NGKLRIDQIAMLEPDDSTTFASLGNFYTRIHLLPLLRQRIHIDAVLIDKPYLNVYQDGT- 115

Query: 121 VSNWFQR-----------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
             N+              +        V ++ I +  G +   D + +  +  ++L++ +
Sbjct: 116 SFNFDDLLTRFLTPADTVEKAPSNPWTVDIDDIKIHNGELTYKDMQRNVTWGFNELDIDV 175

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
               L+         +         G+        + TA++       +L +      + 
Sbjct: 176 PGLHLSGH---ERTDMGIVFNFSRGGSLRTSLEYDQATADYDLSLLLSNLSLAGTAAYFN 232

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
            +ID+       E             +    L     A  S L       +  + +    
Sbjct: 233 QVIDI----GSVEGLVTLDLHVKGNANHLLDLRTYGIAAASGLKLRDSRDNRIIDVDTLN 288

Query: 290 LQS 292
              
Sbjct: 289 FDL 291


>gi|302035662|ref|YP_003795984.1| hypothetical protein NIDE0277 [Candidatus Nitrospira defluvii]
 gi|300603726|emb|CBK40057.1| protein of unknown function; AsmA family [Candidatus Nitrospira
           defluvii]
          Length = 702

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 100/327 (30%), Gaps = 51/327 (15%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--F 79
            +P  ID   +++ +      ++ +K+ ++  I++ I P          +          
Sbjct: 20  ALPFLIDLNKYQDRYRPLIEEVLNRKVELR-DIRLTIWPRIGARVGGFVVQDDPAFRTGP 78

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN--- 136
            + +  L +  + LPLL G + V ++ +  P +    +++G  N     +          
Sbjct: 79  FASLSSLDVGVKLLPLLKGTVEVEEITLRDPVITVLKNTQGQLNISTLGAKTPAPPAPSK 138

Query: 137 -----------------VILEKIHVKGGRIKIIDQESDQ--VYFLSDLNLQISARFLNII 177
                              ++++ + GG++   D+ + +   + +++L   +++  L   
Sbjct: 139 PEAPAQTPGSPLQILALFAVDRVSIDGGKLSYRDESTPKPTEHTVNNLEFLLTSVHLGES 198

Query: 178 SPLSIDSIKG----SVIAEGTG-----NFDNKRSAFKITANFPAKNKAIS-LKIQLFPLA 227
             + + +        V  +GT        D K   F +     A       +   L    
Sbjct: 199 PTVHLGATLQPYNLPVRLDGTFGPLVETLDMKSFTFNLALGKVAIGLKGRAVGGNLDATI 258

Query: 228 YPIII---DLFGNLFWNEKQPIYSGVFSV-------------AGDFSKLLNLELSAKKSR 271
             + I   DL   L   +   I     ++                    L L L    S 
Sbjct: 259 NALQIDTADLPLTLPLTKPVQIKDVHLTLHALYPVPPDTPPANQVDLTDLGLTLVMGGSA 318

Query: 272 LSGNFKISDGNVRISRYKLQSILPNSS 298
           ++     + G   ++         +  
Sbjct: 319 INVKGTAAKGLANLTAASASINSADLP 345


>gi|300312993|ref|YP_003777085.1| hypothetical protein Hsero_3699 [Herbaspirillum seropedicae SmR1]
 gi|300075778|gb|ADJ65177.1| exported protein [Herbaspirillum seropedicae SmR1]
          Length = 1124

 Score = 82.6 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 95/302 (31%), Gaps = 30/302 (9%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
            R+    Q    +G+K+ V     +   PF  ++   DI + + +  +    ++ L + A
Sbjct: 47  VRKLAVEQTQAQLGRKLDVG---AVSFNPFRLALQVSDITLYEADGKTPFLAVQSLLVDA 103

Query: 91  EFLPLLSGEIRVFDMYIDQPHLNFYL---SSKGVSNWF------QRKSTMDMIHNVILEK 141
               LL     + ++ + +P L          G  N+         +   +      L  
Sbjct: 104 SSASLLCLAPVLDEVRLSKPQLRVQRIDADQGGHYNFSDILERLAAQPKSEGQARFSLAN 163

Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT-GNFDNK 200
           + ++ G I   D+ + +   ++ L + +        +  S    + S    GT  +   +
Sbjct: 164 VQLQDGAIHFEDKLTGKTIDIAALQVGLPFISNLPGNIDSFVQPQLSATINGTPLHLKGR 223

Query: 201 RSAFKITANFPAKNKAISLKIQ-------------LFPLAYPIIIDLFGNLFWNEKQPIY 247
              F  T           L +              L        +DL  N   ++     
Sbjct: 224 SKPFSSTLESAFAIDIERLDLVSYLPFVPMELPVLLQSGHLSTRLDLGFNRQQDKPTITL 283

Query: 248 SGVFSVAGDFSKL--LNLELSAKKSRLS-GNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
           +G   +             L A++  +  G F +   + +IS+  L+     +S +   +
Sbjct: 284 AGDVVLDDIAVADRAKAPLLKARQLAVKLGQFDVLAASGQISQVTLEQPQIWASMNGRGE 343

Query: 305 TK 306
             
Sbjct: 344 IN 345



 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/314 (13%), Positives = 101/314 (32%), Gaps = 28/314 (8%)

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
           V   DI +  +       K   L+++     +L+   ++  + ++QP +   ++ +G  N
Sbjct: 287 VVLDDIAVADRAKA-PLLKARQLAVKLGQFDVLAASGQISQVTLEQPQIWASMNGRGEIN 345

Query: 124 WFQRKSTMDMIHN--------------VILEKIHVKGGRIKIIDQES---DQVYFLSDLN 166
           W +  +                     ++L++++V+ GR+   D+ +    Q   LS + 
Sbjct: 346 WVRALAAPATGKRTAASQAATSAQASAIVLQQLNVRDGRVNWRDEANASPAQNVQLSGIE 405

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
           +  +       +  +   +       G   F+ + +  K           I L      L
Sbjct: 406 IDAAQLSTAANAQPATLKVTAIENGHGRLGFEGQVAPLKPAVAGKLTLAGIDLAGYRNYL 465

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
               +  L G L  N       G   +     +L +L+L+  + + +    +    +R+ 
Sbjct: 466 HRAPVSGLAGKLSGNSTLQWRDGHLKLDDSTVELASLQLT-PEGKSTQPISVESLKLRVQ 524

Query: 287 RYKLQS-----ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341
                      +   +  D++    ++      L      A+   DL E      +    
Sbjct: 525 NVTDTFDQAMPLTLQARLDKNGSADITGQIAPHL----KNADLDLDLRELPIAPVQGYFT 580

Query: 342 KNDDLKKDDIQYSV 355
              ++   +   S 
Sbjct: 581 DILNVSISNGALSA 594


>gi|94969832|ref|YP_591880.1| hypothetical protein Acid345_2805 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551882|gb|ABF41806.1| protein of unknown function DUF490 [Candidatus Koribacter
           versatilis Ellin345]
          Length = 1317

 Score = 82.6 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 55/405 (13%), Positives = 125/405 (30%), Gaps = 36/405 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDF----ERQATLIVGKKIAVKGGIKIHI 58
           + V  G   + S+VL+      + +    F        + +A+  +  ++ ++   K+++
Sbjct: 6   KVVGWGAVAVLSLVLLAIVGTAVLLHSEKFHRYVIVRVQTEASDSLNAQVTLR-DFKLNL 64

Query: 59  LPFPSVFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
               ++   D+ +   + +  +    ++      + + +L  +  + D+ +D P ++ Y+
Sbjct: 65  -STLTLDLYDLNLHSSESDPNAPLLHVDHAGASVKIISMLKRQWNLSDIQVDHPVIHLYV 123

Query: 117 SSKGVSNWFQRK----STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
              G +N  + K    ++   I ++ + +  +  G I   D+ S+    L D+  Q S  
Sbjct: 124 DKNGNNNLPKPKTSNGNSNTNIFDLAIRRAALTNGEIYYNDRRSELDANLLDVTFQSSYD 183

Query: 173 ---------FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKI-TANFPAKNKAISLKIQ 222
                     L              V  + + +FD  R+  K+   NF      + L   
Sbjct: 184 AANGGRYYGSLGYKQGNLHFGDYSPVQHDLSASFDADRNGIKLDPVNFAIGESKVLLHAT 243

Query: 223 LFPLAYP-------IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA-KKSRLSG 274
           +     P         +D        +   I  G   +AG+     +    A +   + G
Sbjct: 244 MQNYTQPVVTAAYDASLDATQFRKILKNASIPVGTVRLAGNAIYHQDPNKPALQTVNVDG 303

Query: 275 NFKISDGNVRISRYKLQSILPNSSTDE-DNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
                   V     +      +      D   ++S         S  G E       TD 
Sbjct: 304 TIASRSLLVNQPGLRADIRAIDGHYKIADGNAELS-----SFRASIFGGEINAIAKVTDL 358

Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378
                 K                       + + + + N S D  
Sbjct: 359 AGAGNGKLHAVAKNISAADLKTLANAAAIKNVNVDGKLNASADAT 403


>gi|163849772|ref|YP_001637815.1| hypothetical protein Mext_0320 [Methylobacterium extorquens PA1]
 gi|163661377|gb|ABY28744.1| hypothetical protein Mext_0320 [Methylobacterium extorquens PA1]
          Length = 1175

 Score = 82.6 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 109/322 (33%), Gaps = 31/322 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R  L  L     +VLV A  VP FIDW+  R   +R  +  +G     +G I + +LP 
Sbjct: 1   MRDSLTALAGAVVLVLVAALAVPPFIDWSAHRALIDRTLSDSLGAGARSEGAIDLRLLPS 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P +    +R+  ++        + +       PLL GE+R     +++  L   +S + +
Sbjct: 61  PHLRLARLRLGAEDG--PALDAQAVDAEIALAPLLKGEVRFVQTSVERAGLTLPVSDEAL 118

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
               + ++       ++++ + ++   +  +          +  NL++ A          
Sbjct: 119 LLPREPQTLRRD---IVIDDLRIRRLTVATLRTGEAPQEQFAAENLRLRAP--------- 166

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
             ++ G  +AEGT         F +  +    + ++SLK+       P  ++L   +   
Sbjct: 167 --ALAGPWLAEGTAKGS----PFHLATSVAGSDGSLSLKLTGGGDTMP-RLELDARITLK 219

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKS----------RLSGNFKISDGNVRISRYKLQ 291
            +                     L+               L+  F      V+    +L+
Sbjct: 220 PEDAPGEDRVRRGLVPEAEGTARLTVGPPVQPAGAVLPLTLAAKFASRGPLVQAKTVELE 279

Query: 292 SILPNSSTDEDNKTKVSQDEEN 313
                 +       ++   E  
Sbjct: 280 LDPGGKAARLSGNGRLDLREAR 301


>gi|333029884|ref|ZP_08457945.1| putative outer membrane protein [Bacteroides coprosuis DSM 18011]
 gi|332740481|gb|EGJ70963.1| putative outer membrane protein [Bacteroides coprosuis DSM 18011]
          Length = 844

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/344 (11%), Positives = 114/344 (33%), Gaps = 34/344 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI--- 58
           +++     G + +++LV   ++P            +++A  ++  +      + I +   
Sbjct: 1   MKKAFKITGIIVAILLVIMISIPFLFS-GKIESLVKKEANKMLNAEFDFA-SLDISLFKN 58

Query: 59  LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFY 115
            P  S+  KD  +    +      +K + L+     + L       +  + +++  L   
Sbjct: 59  FPKASLTLKDFWVKGINEFENDTLAKAKELTATVNVMSLFKDSGYEIGQIILNEGKLKAV 118

Query: 116 LSSKGVSNWFQRKSTM-------------DMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           +   GV NW   K                +   ++ ++KI VK   +   +Q+ +Q   +
Sbjct: 119 VLPTGVENWNILKEEDTKEDVQEELEDATEGDFSLKVDKISVKNFSLIYDNQKDNQFALI 178

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
            +L+L +     +  + L+I+    ++     G         K   N  A        + 
Sbjct: 179 DNLDLNLKGDLSSKKTTLAIEGNTPNLTFRSGGIPLINSMHLKAKINLDADLSNKVFTLA 238

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                          +  N  +    G  ++  + +  ++L+L+  +        +    
Sbjct: 239 KN------------EIQLNAIKTNLDGWVAMKENDAIEMDLKLNTSEVGFKEVLSLIPA- 285

Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
           +  + +K       ++     K  +  D     + + +  ++M 
Sbjct: 286 IYANDFKNIQTDGTATLIAYAKGTMQGDILPSFDITLDVKDAMF 329


>gi|332308460|ref|YP_004436311.1| hypothetical protein Glaag_4119 [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332175789|gb|AEE25043.1| hypothetical protein Glaag_4119 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 1301

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 54/380 (14%), Positives = 119/380 (31%), Gaps = 18/380 (4%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI- 58
           +++++      L  +V V    V   + +    +   E+      G +I + G I     
Sbjct: 11  IIKKLWSCAAILLVLVAVAISVVRYILPYMDGQKHRIEQWVEGQYGVEINI-GNITAQWK 69

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS 117
              P++  +D+++ Q         IE   +  +F   +L+ ++R     ++  +L   LS
Sbjct: 70  GAGPAIVLEDLQLVQNAQSPLSLDIEKTVIELDFWDSVLARQVRSQRFDLNGLNLKVDLS 129

Query: 118 SKGVSNWFQRKSTMDMIHNV-ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
                       +      +  L+   V   + +I      QV  ++ L      R    
Sbjct: 130 LMNQEGSDFPVVSALKQLFLEQLQSFSVSNSQFEITTSHDQQVVLVNQLLWSNKGRHHQG 189

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
           +  L ++ +  +  A  T +    + +   T    A    +S  I  +      +++  G
Sbjct: 190 VGELQVEELASN-SASFTLDLRGDKDSLNGTFYAKAHEVDLSPWINQWLATRYELVESRG 248

Query: 237 NLFWNEKQPIYSG---VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN--VRISRYKLQ 291
           N                  +A         +   K + L G             + Y L 
Sbjct: 249 NFVVWASIEDGDIKNAQLDLADSRFVWQKEDAQIKAAILGGQLNAEPSKEGWIFNLYDLG 308

Query: 292 SILPNSSTD------EDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
               + S         ++K +V     + ++ S         LN  D F   +  + +  
Sbjct: 309 LQANDRSQTSNWYGEINDKGQVHIQNADRVDLSAITPLLPLALNPVD-FNVLQGLSPSAT 367

Query: 346 LKKDDIQYSVNKKEEKDNSH 365
           L K ++Q+       + N  
Sbjct: 368 LNKLNVQFDKTDTYAQVNVS 387


>gi|33596497|ref|NP_884140.1| hypothetical protein BPP1876 [Bordetella parapertussis 12822]
 gi|33566266|emb|CAE37177.1| conserved hypothetical protein [Bordetella parapertussis]
          Length = 1219

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/390 (10%), Positives = 109/390 (27%), Gaps = 41/390 (10%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI 58
           +LR +   +  ++ V+ V    +  ++      +R   E+ A+  +G ++A+   +    
Sbjct: 23  ILRLLFWSVFAIYGVLAVAFLGLRYWVLPRADQWRPQIEQYASQALGSRVAID-SLSADW 81

Query: 59  -LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
               P +    +RI           +  ++    +  +L     +  + ID   L     
Sbjct: 82  SGLNPRLNLSGVRIYD-HQADPVLSLPSVAAVLGWRSVLKLSPTLQSLRIDGADLLVRRD 140

Query: 118 SKGVSNWFQRKSTMDMI------------HNVILEKIHVKGGRIKIIDQE-SDQVYFLSD 164
           S        +   +                     ++ + G  ++  D+        L  
Sbjct: 141 SADRLWVAGQSIDLAAPSDHGFTESPALRWLARQRELALHGVTLRWQDEARQAPELRLDG 200

Query: 165 LNLQISARFLNIISPLSID---------SIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215
           L+L +    L+    L +          S++G +         +  +++        ++ 
Sbjct: 201 LDLLMRNGVLSHRFSLRVRPPAQLAAKVSLRGELNRSLFARDGSNPASWSGQLYAEVQDA 260

Query: 216 -AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL-----LNLELSAKK 269
              +    +   A          L  +  +         A            ++ + + +
Sbjct: 261 EPAAWAPWVAIPAAQGRYAARAWLQLDHGKFT-DLTMDAALRGLNWRAGQSASVSVDSAQ 319

Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL---NFSENGAESMH 326
            RL G        ++ S   L      +      +          +     + + A+   
Sbjct: 320 WRLQG---APGDLLQFSDLPLARSADGAGVSVTGQADGLWLNLPEIFEHPLALDRAQLDA 376

Query: 327 DLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356
            L E    +      +   L   D+  +++
Sbjct: 377 TLTEPAG-QPLTLNLRRLQLANPDLDATLH 405


>gi|172059719|ref|YP_001807371.1| hypothetical protein BamMC406_0659 [Burkholderia ambifaria MC40-6]
 gi|171992236|gb|ACB63155.1| conserved hypothetical protein [Burkholderia ambifaria MC40-6]
          Length = 1398

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 97/331 (29%), Gaps = 37/331 (11%)

Query: 2   LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55
           LRRV      +      V       +   +     +FR   ER  +  +  ++++ G + 
Sbjct: 24  LRRVFRVTLAVGIGTYFVASASFLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GRLS 82

Query: 56  IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            H     P V   D+ I  ++       +   +    ++ LL     +  + +D P L  
Sbjct: 83  PHWSGMQPGVEVTDLTIRGRDGRI-ALSVPHATAALSWMSLLRLSPALSSLIVDHPDLVV 141

Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166
             ++ G  +            +       +  E I ++ G ++  D + D     LS + 
Sbjct: 142 ARAADGSLSVAGVGVATTHGGNDTFSTWLLKQEAIVLRNGTLRWRDAQHDAPELALSGIR 201

Query: 167 L----QISARFLNIISPLSIDSIKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAISL 219
           L            + +P +   + G +                    T +       + L
Sbjct: 202 LAVLNHGRVHKAALQAPANGTLLLGPLDFRARFRHKPLQPIGKPTNWTGDAYLSTGPVDL 261

Query: 220 KIQLFPLAYPI-----IIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270
           +     L  P+      ID      + +     +G   + G    L        L     
Sbjct: 262 QTLGRYLDIPLTIHAGRIDNAIWATFEDGHLRSAGG-DLQGADVVLRVRPTQPRLDVPTV 320

Query: 271 RLSGNFKISDGN---VRISRYKLQSILPNSS 298
               +  ++ G    + ++R+  +   P   
Sbjct: 321 GFGWDMALNAGRDYTLHLTRFNAELGQPPLP 351


>gi|258542556|ref|YP_003187989.1| hypothetical protein APA01_14690 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256633634|dbj|BAH99609.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
 gi|256636693|dbj|BAI02662.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
 gi|256639746|dbj|BAI05708.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
 gi|256642802|dbj|BAI08757.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
 gi|256645857|dbj|BAI11805.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
 gi|256648910|dbj|BAI14851.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
 gi|256651897|dbj|BAI17831.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654954|dbj|BAI20881.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
          Length = 624

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 84/302 (27%), Gaps = 19/302 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R +   G + +V  V A  +   +   +       + +  +G+K  ++  + + +  +
Sbjct: 1   MPRWVWLAGSVLAVSAVAAGVLVAGLPHYNLAHIASDKLSASLGRKTQIE-ALHVRLGRW 59

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            +V   ++ +     GS      ++ L  +     L +G ++  D+ ID     F  + +
Sbjct: 60  VTVDMDNLHLANIPQGSRADMITLKHLHAQILLSSLFNGHMQARDVKIDGFSGLFERTPE 119

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI---IDQESDQVYFLSDLNLQISARFLNI 176
              NW   K                  G+I      D        +       S      
Sbjct: 120 REPNWRFGKKASSAPSKPKE-----TSGKIWFPGLRDAAITDSEVIYRSAHGHSYVTGLK 174

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP--AKNKAISLKIQLFPLAYPIIIDL 234
              L   S    ++ +  G ++      +         +         +   +  + + L
Sbjct: 175 AVALHSVSDSTPLLMDVNGAYNGTPVTLQANMQPINVLRQAGKPYGTDIHAASGDLSLHL 234

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNL------ELSAKKSRLSGNFKISDGNVRISRY 288
            G +              +    S+ +            +   LSG+F        +   
Sbjct: 235 NGTMTDLFDFDGIDAKLDLQTATSRQIMAFAGEADSKITQPVTLSGHFTHKGDVWHLDHT 294

Query: 289 KL 290
             
Sbjct: 295 TG 296


>gi|307728524|ref|YP_003905748.1| hypothetical protein BC1003_0454 [Burkholderia sp. CCGE1003]
 gi|307583059|gb|ADN56457.1| hypothetical protein BC1003_0454 [Burkholderia sp. CCGE1003]
          Length = 1398

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/326 (14%), Positives = 104/326 (31%), Gaps = 34/326 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPL------FIDWTDFREDFERQATLIVGKKIAVKGGIK 55
           LRR L  +  L  V+   A  + L            FR   E   +  +  + ++ G + 
Sbjct: 27  LRRTLHVVLALALVLYFIAAGLFLGLRYGVLPRADAFRPRIEATVSDKLHAQFSI-GKLA 85

Query: 56  IHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            H   F P +   ++ I  ++       I   +    +  L      +  + +DQP +  
Sbjct: 86  PHWSGFQPGLDITNLVIRDRDG-KPALTIPHATATLSWRSLWQFRPVLSSLIVDQPDVLI 144

Query: 115 YLSSKGVSNWFQRK-------STMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166
              S GV +            +       +  + I V+GG ++  D + D     L D+ 
Sbjct: 145 ARGSDGVLSVAGVPVPTRHSGNDTLSTWLMRQQAIVVRGGVLRWRDAQRDAPELALRDIR 204

Query: 167 LQISARFLNI----ISPLSIDSIKGSVIA-----EGTGNFDNKRSAFKITA---NFPAKN 214
           + I     +      +P     ++G +               K   +K  A     P   
Sbjct: 205 IAILNDGYDHRLALQAPPDGHLLRGPLDFRTHFRHAPLAAIGKPVNWKGQAYVSTGPVDL 264

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQ-PIYSGVFSVAGDFSKLLNLELSAKKSRLS 273
             ++  I+     +   ID    + + + +    SG  S A    ++   +        S
Sbjct: 265 PTLARYIKFPIETFAGRIDNAIWVDFADGRMTSASGQMSGADVALRVRPTQPKLLLPVAS 324

Query: 274 GNFKISDG----NVRISRYKLQSILP 295
             +++        ++++  + +   P
Sbjct: 325 FGWRVEGQQGDYKLQLNDLRAELGQP 350


>gi|325282028|ref|YP_004254570.1| AsmA family protein [Odoribacter splanchnicus DSM 20712]
 gi|324313837|gb|ADY34390.1| AsmA family protein [Odoribacter splanchnicus DSM 20712]
          Length = 842

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 60/393 (15%), Positives = 131/393 (33%), Gaps = 38/393 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI--- 58
           +++V I LG L  VV+     +P F    D  +  E+Q+   +  K+ + G + + +   
Sbjct: 1   MKKVFITLGVLILVVITALMVIPTFF-KGDILQIIEKQSAKYINAKLKI-GDMNLSMFIS 58

Query: 59  LPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNFY 115
            P  +V  K++ I  ++   G     I           L++G E+ V  + +    +   
Sbjct: 59  FPNLNVALKEVMITGQDEFAGDTVVYIPLFEASVNLKSLIAGDELIVNQLLLKNCRIAPT 118

Query: 116 LSSKGVSNWF----------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159
           ++S+G +NW                   +        + L  I ++   I   D +    
Sbjct: 119 VNSEGKANWDILLSSGSQTSATTETPPDEPKGKAERGLRLNDIAIENLFITYNDFQHSTY 178

Query: 160 YFLSDLNLQISARF--LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217
             ++D++L+++  F   N +  + +     S   + +   +     ++       K    
Sbjct: 179 ASIADIDLKLNGNFSETNTLIDIFLALQNISYRHQNSVWINKTDLKWQAVIGANLKEMTF 238

Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNF 276
            ++ +       + +DL GN+   E +       +     F+ LL +     +  + G  
Sbjct: 239 DIQ-KNDLALNDLKLDLTGNIGVGEDKYKLDLQLNAPDTKFASLLAMVPKTLQHYIEGLE 297

Query: 277 KISDGNVRI---SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
              D  + +     Y    +    +    N   V   E           +   DLN +  
Sbjct: 298 TSGDFKLNVTAKGEYYADHLPALQANLLVNNASVKYPELPE-----AIRQINIDLNVS-- 350

Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHD 366
                  +   +LKK     + N      N  +
Sbjct: 351 NPGGPVDSTQLNLKKLSFDIAGNPFSMYLNISN 383


>gi|115350688|ref|YP_772527.1| hypothetical protein Bamb_0634 [Burkholderia ambifaria AMMD]
 gi|115280676|gb|ABI86193.1| conserved hypothetical protein [Burkholderia ambifaria AMMD]
          Length = 1398

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/331 (12%), Positives = 97/331 (29%), Gaps = 37/331 (11%)

Query: 2   LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55
           LRRV      +      V       +   +     +FR   ER  +  +  ++++ G + 
Sbjct: 24  LRRVFRVTLAVGIGTYFVASASFLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GRLS 82

Query: 56  IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            H     P V   ++ I  ++       +   +    ++ LL     +  + +D P L  
Sbjct: 83  PHWSGMQPGVEVTNLTIRGRDGRI-ALSVPHATAALSWMSLLRLSPALSSLIVDHPDLVV 141

Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166
             ++ G  +            +       +  E I ++ G ++  D + D     LS + 
Sbjct: 142 ARAADGSLSVAGVGVATTHGGNDTFSTWLLKQEAIVLRNGTLRWRDAQHDAPELALSGIR 201

Query: 167 L----QISARFLNIISPLSIDSIKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAISL 219
           L            + +P +   + G +                    T +       + L
Sbjct: 202 LAVLNHGRVHKAALQAPANGTLLLGPLDFRARFRHKPLQPIGKPTNWTGDAYLSTGPVDL 261

Query: 220 KIQLFPLAYPI-----IIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270
           +     L  P+      ID      + +     +G   + G    L        L     
Sbjct: 262 QTLGRYLDIPLTIHAGRIDNAIWATFEDGHLRSAGG-DLQGADVVLRVRPTQPRLDVPTV 320

Query: 271 RLSGNFKISDGN---VRISRYKLQSILPNSS 298
               +  ++ G    + ++R+  +   P   
Sbjct: 321 GFGWDMALNAGRDYTLHLTRFNAELGQPPLP 351


>gi|293604495|ref|ZP_06686900.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292817076|gb|EFF76152.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 1219

 Score = 81.9 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/363 (12%), Positives = 107/363 (29%), Gaps = 26/363 (7%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI 58
           MLR +      ++ VV VG   V  ++     ++R   E  A+  +G ++ + G IK + 
Sbjct: 1   MLRCLFWAALIVYGVVAVGFLGVRYWVLPRVGEWRPQIEAYASDALGARVTI-GDIKANW 59

Query: 59  -LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
               P +    +++   +  +    +  +S    +  +L+   R+  + + +P L     
Sbjct: 60  QGLNPRLDLTSVQVVD-DSETPVLSLPSVSAVLAWRSVLTLSPRLVRLQLHKPELTLRRD 118

Query: 118 SKGVSNWFQRK------------STMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSD 164
                    +             +   +       ++ V    I   D         L+ 
Sbjct: 119 PANHLWVAGQDIDLNASDHRSDLNHPALRWLARQRELSVDDATIIWQDDLRRAPALPLTG 178

Query: 165 LNLQISARFLNIISPLSIDSIKGSVI-AEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
           ++  +    L+    L   +        E  G F+    A   +       +  +    +
Sbjct: 179 VDFLMRNGSLSHRFVLRASAGDALARKVELRGEFNRSLFAANSSNPANWSGQFYTELDDV 238

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
            P A+   I   G       +        +       L  +++ +    + +        
Sbjct: 239 EPQAWAPWIPAPG----ISGRIAARAWLQLERGKFTELTSDVALRGVDWAADHDGPSVRG 294

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343
             ++++LQ +  +    ED     S      ++           L     F+E       
Sbjct: 295 ASAQFRLQGLPGDFVQIEDVPLARSPG-APDVSVKGAAQHLRVTL--PGVFKEPTLVAHE 351

Query: 344 DDL 346
             +
Sbjct: 352 LSV 354


>gi|170700484|ref|ZP_02891489.1| conserved hypothetical protein [Burkholderia ambifaria IOP40-10]
 gi|170134608|gb|EDT02931.1| conserved hypothetical protein [Burkholderia ambifaria IOP40-10]
          Length = 1398

 Score = 81.9 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/331 (12%), Positives = 97/331 (29%), Gaps = 37/331 (11%)

Query: 2   LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55
           LRRV      +      V       +   +     +FR   ER  +  +  ++++ G + 
Sbjct: 24  LRRVFRVTLAVGIGTYFVASASFLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GRLS 82

Query: 56  IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            H     P V   ++ I  ++       +   +    ++ LL     +  + +D P L  
Sbjct: 83  PHWSGMQPGVEVTNLTIRGRDGRI-ALSVPHATAALSWMSLLRLSPALSSLIVDHPDLVV 141

Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166
             ++ G  +            +       +  E I ++ G ++  D + D     LS + 
Sbjct: 142 ARAADGSLSVAGVGVATTHGGNDTFGTWLLKQEAIVLRNGTLRWRDAQHDAPELALSGIR 201

Query: 167 L----QISARFLNIISPLSIDSIKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAISL 219
           L            + +P +   + G +                    T +       + L
Sbjct: 202 LAVLNHGRVHKAALQAPANGTLLLGPLDFRARFRHKPLQPIGKPTNWTGDAYLSTGPVDL 261

Query: 220 KIQLFPLAYPI-----IIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270
           +     L  P+      ID      + +     +G   + G    L        L     
Sbjct: 262 QTLGRYLDIPLTIHAGRIDNAIWATFQDGHLRSAGG-DLQGADVVLRVRPTQPRLDVPAV 320

Query: 271 RLSGNFKISDGN---VRISRYKLQSILPNSS 298
               +  ++ G    + ++R+  +   P   
Sbjct: 321 GFGWDMALNAGRDYTLHLTRFNAELGQPPLP 351


>gi|225873639|ref|YP_002755098.1| hypothetical protein ACP_2040 [Acidobacterium capsulatum ATCC
           51196]
 gi|225792269|gb|ACO32359.1| conserved hypothetical protein [Acidobacterium capsulatum ATCC
           51196]
          Length = 931

 Score = 81.9 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/327 (13%), Positives = 91/327 (27%), Gaps = 35/327 (10%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE--DGSFES 81
           P +I    +R       +  +G+ + ++  + + +LP P +  ++  +D+          
Sbjct: 46  PPYIGLNHYRRQMVASVSASLGRTVHIQ-SMHLRLLPTPGIVMENFVVDEDPAFGNEPAL 104

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-----------QRKST 130
               +        L    I V  + +D P +N   +  G  ++               + 
Sbjct: 105 TAPTVVATLRVSSLWRRHIEVSSISMDTPSVNLVRNPNGNWSFGSILLQAARSTNAPTTQ 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI------SARFLNIISPLSID- 183
                      I + G RI          + L D +L +        R      P+  D 
Sbjct: 165 RYAGGAPRFPYIEMSGARINFKQGLYKLPFSLFDADLALWQQSANRWRLRIHAQPVRTDL 224

Query: 184 ----SIKGSVIAEG----TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
               +  G++  +G    T N  +       +       +A  L        +   + L 
Sbjct: 225 DLDLADTGTLRIDGWLGRTTNLHSLPVHLDGSWQDAQLGQATRLLFGAD-EGWRGQLHLS 283

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
           G+L              +          + S     L  N + +  ++R S   L  +LP
Sbjct: 284 GSLRGTLSDLQARWQIHLDNPHRIEFTPDSS---PSLDANCQATYHSLRHSLDGLLCLLP 340

Query: 296 NSS--TDEDNKTKVSQDEENLLNFSEN 320
            +                   L    N
Sbjct: 341 TAPGHLLLTGAIPDLLHPGPSLQLEVN 367


>gi|297538859|ref|YP_003674628.1| hypothetical protein M301_1671 [Methylotenera sp. 301]
 gi|297258206|gb|ADI30051.1| conserved hypothetical protein [Methylotenera sp. 301]
          Length = 1315

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/401 (11%), Positives = 114/401 (28%), Gaps = 40/401 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-L 59
           R  L+    +  + L+ A  +  ++      +++     AT    +K+ + G IK     
Sbjct: 11  RIALLLATIIIVIFLMAALVIQFYVFPSINQYKDKIANYATQAAHQKVVI-GNIKAGWQG 69

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             P +   +I +   E+      ++   +   +L +   E  + +  I  P L    +  
Sbjct: 70  INPHLSLSNIDLYDTEN-RPALALKNTDISFSWLSIPLLEPHLANFTIRSPELTIRRNLN 128

Query: 120 GVSNWF-----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARF 173
           G           +         +   ++ V   ++  +D+        L  LNLQ+ +  
Sbjct: 129 GDIFVAGISMQGQSKPDLPNWLLRQSQLDVLNAKVVWLDEMRGAPALSLEKLNLQVVSPP 188

Query: 174 LNIISPL----------SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA-ISLKIQ 222
                            +  S    + A   GN  ++ S +  +     KN   ++ K  
Sbjct: 189 WKSFIKNHRITLSTLVSAGTSEPIMINANVYGNDISRLSEWHGSIETKLKNANVVAFKPW 248

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYS--------GVFSVAGDFSKLLNLELSAKKSRLSG 274
                    IDL   +   +    ++           ++      L         ++L G
Sbjct: 249 FDYSPITQPIDLQSGVGSTDTTIEFAKSQVQSVTSNVALDNVQLLLKANTEPLILNKLVG 308

Query: 275 NFKI----SDGNVRISRYKLQS-ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
                   ++ +  +S   L +              K  Q  E    F+           
Sbjct: 309 ELDWKSSATEQSFNVSHLTLNTSNGLTLKDAAGGYAKTQQGNE---KFNLKLTHIDLAFI 365

Query: 330 ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQ 370
           +    +       +   K + +  +        +   K++ 
Sbjct: 366 KAYLVQL--PLPADIAQKINSLSPTGKLDNLLLSWEGKQSL 404


>gi|330827857|ref|YP_004390809.1| AsmA family [Aeromonas veronii B565]
 gi|328802993|gb|AEB48192.1| AsmA family [Aeromonas veronii B565]
          Length = 705

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/366 (11%), Positives = 106/366 (28%), Gaps = 39/366 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR +L    FL   V V         D    +       +   G  + + G +  + L  
Sbjct: 5   LRGLLYTFAFLLLFVWVALG----LFDAERAKGPIASWISQQTGVPVTI-GRLVFNPLHP 59

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            ++  + +R            ++ + +  E +  LS ++R+  + + +P +   L ++  
Sbjct: 60  YTLLAEQVRYGDA------VSLDKIYLEIESIDWLSRDVRIAHLDLIRPAIKLPLPNQ-- 111

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                       I +  ++++ ++   + +          LSD  L    R       L+
Sbjct: 112 --LPSLPVHSLTISDSTIDRLSLESPELTLR----GLNATLSDWELIDPKRQPQANLSLN 165

Query: 182 IDSIKGS----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII-DLFG 236
           I  ++            G  + +             +  +   + L   A  + + DL  
Sbjct: 166 IGQLETPQFTFARLNLQGQLEGEVLRTD-KLVTNLFDGLLETGMVLDWPARTLQLHDLKA 224

Query: 237 -NLFWNEKQPIYSG---VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
             +          G    F +         L+     + ++     ++ + +++ +  Q+
Sbjct: 225 RGMRVELGDLTQQGFPQRFPLQSVSLDRGQLD-GVSLNDINQELSFNNFSGQLTAFNWQA 283

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN----KNDDLKK 348
                          +  +     F     +     +      E + K      N +L  
Sbjct: 284 GN-----QPTGYLSGTLGDMGRGLFQLEEIKGKLAFSPQQIDGELQGKAYEGEFNVELSL 338

Query: 349 DDIQYS 354
           D  Q  
Sbjct: 339 DTQQQK 344


>gi|187922734|ref|YP_001894376.1| hypothetical protein Bphyt_0728 [Burkholderia phytofirmans PsJN]
 gi|187713928|gb|ACD15152.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN]
          Length = 1428

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 101/321 (31%), Gaps = 24/321 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTV------PLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55
           LRR+L  +  L  V+   A  +       +      FR   E   +  +  +  + G + 
Sbjct: 59  LRRILHVVLALALVLYFIAMGLFLGLRYVVLPRVDSFRPRIEAAISEKLHAQFTI-GKLA 117

Query: 56  IHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            H   F P +   ++ I   +  +    I   +    +  L      +  + +DQP +  
Sbjct: 118 PHWSSFQPGLDVTNLIIRDHDGKA-ALTIPHATATLSWRSLWQFRPALSSLIVDQPDVLV 176

Query: 115 YLSSKGVSNWFQRK-------STMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166
             SS GV +            +       +  + I V+GG ++  D + D     L D+ 
Sbjct: 177 SRSSDGVLSVAGVPVPTRHSGNDTLSTWLLRQQAIVVRGGALRWRDAQHDAPELALRDIR 236

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
           + I     +    L   +     +  G  +F        ++A     N    + +   P+
Sbjct: 237 IAILNDGYDHRLALQAPADGQ--VLHGPLDFRTHFKHAPLSAIGKPINWTGQVYVSTGPV 294

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
             P +   + N               +     ++ +       + ++   + +   + + 
Sbjct: 295 DLPTLAR-YVNFPIETFAGRIDNAIWIDFAEGRMKSAGGQLAGTDVALRVRPTQPKLLVP 353

Query: 287 ----RYKLQSILPNSSTDEDN 303
                ++L++   +      N
Sbjct: 354 VANFSWRLEAAEGDYKLQLTN 374


>gi|326388699|ref|ZP_08210292.1| hypothetical protein Y88_3100 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326206950|gb|EGD57774.1| hypothetical protein Y88_3100 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 1036

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/316 (10%), Positives = 83/316 (26%), Gaps = 19/316 (6%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR       +  ++++G      ++     R          + K++A+    +I   P  
Sbjct: 5   RRKWWIAPAVLILLVLGYLAAGYWLVPRVLRSQAVGWTHDRLHKRLALG---EIRFDP-L 60

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
                   I   +       +  L ++   L +      + ++ +D+P ++  +   G  
Sbjct: 61  RFTLDIDSIAVDDPTHPMVALGHLHLKMAPLSVFEKAWHLPEVGLDRPAVDAIVRRDGSL 120

Query: 123 NWF----QRKSTMDMIHNVILEKIHVKGGRIKIID-------QESDQVYFLSDLNLQISA 171
           N                 + ++++ + GG++   D       +   +    +  +L+ SA
Sbjct: 121 NLAELIPPSTGEATKPLALRIDRLTIAGGQVAFADLSLPLQPRSRLEPVTFTLKDLRTSA 180

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-LKIQLFPLAYPI 230
                 +  +           G  +     S           +     L   L  +    
Sbjct: 181 SGSGDFTFAAASDAGERFDWRGRLSLTPLGSTGSFAVADLRADTLYRYLSPWLPVIPTSG 240

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
                G                VA      + L+         G+      ++   R  L
Sbjct: 241 KASAAGRYAVRYAGGATRLGVDVARLGLADVGLDGGTL---FRGSAHAGKMDLGHGRIDL 297

Query: 291 QSILPNSSTDEDNKTK 306
                ++        +
Sbjct: 298 AIGSDHALGSLTGLAQ 313


>gi|78065305|ref|YP_368074.1| hypothetical protein Bcep18194_A3829 [Burkholderia sp. 383]
 gi|77966050|gb|ABB07430.1| conserved hypothetical protein [Burkholderia sp. 383]
          Length = 1399

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 102/331 (30%), Gaps = 37/331 (11%)

Query: 2   LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55
           LRRV      +      V       +   +     +FR   ER  +  +  ++++ G + 
Sbjct: 24  LRRVFRVTLAVGIGTYFVASGALLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GKLS 82

Query: 56  IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            +     P V   ++ I   +       +   +    ++ LL     +  + +DQP L  
Sbjct: 83  PNWSGMQPGVELTNLTIRGHDGKV-ALSVPHATAALSWMSLLRLSPALSSLIVDQPDLVV 141

Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166
             ++ G  +            +       +  E I ++GG ++  D + D     LS + 
Sbjct: 142 ARAADGSLSIAGVGVATTHGGNDTFGTWLLKQEAIVLRGGTLRWRDAQHDAPELVLSGIR 201

Query: 167 LQISAR----FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT--------ANFPAKN 214
           L +          + +P +   + G +               K +        +  P   
Sbjct: 202 LAVLNNGRVHKAALQAPANGTLLLGPLDFRARFRHKPLAPVGKPSNWAGDAYLSTGPVDL 261

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270
           + ++  + +    +   ID      +++     +G   + G    L        L     
Sbjct: 262 QTLARYLDVPLTIHAGRIDNAIWATFSDGHLHSAGG-DLQGADVALRVRPTQPRLDVPTV 320

Query: 271 RLSGNFKISDG---NVRISRYKLQSILPNSS 298
               + ++  G    + ++R+  +   P   
Sbjct: 321 GFGWDMQLDAGHDYTLHLTRFNAELGQPPLP 351


>gi|254505296|ref|ZP_05117447.1| AsmA family [Labrenzia alexandrii DFL-11]
 gi|222441367|gb|EEE48046.1| AsmA family [Labrenzia alexandrii DFL-11]
          Length = 896

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/394 (11%), Positives = 122/394 (30%), Gaps = 34/394 (8%)

Query: 2   LRRVL---IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQA-TLIVGKKIAVKGGIKIH 57
           L+R L   + + F+  +++      P     +  R      A T  + +++ + G + + 
Sbjct: 6   LKRTLGAGLLVFFISIMLVAAVLYTPF---ASGLRTAVAAYALTEALERQVEIGGDVTVG 62

Query: 58  ILPFPSVFFKDIRIDQKEDG---SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
           + P       DIR+ +++     +    I+ + ++     LLSG+ +   + +    +  
Sbjct: 63  LGPLIGFSASDIRLARRDPAANETPWHAIDHVDVKIPLHALLSGDPKPSAILLRGVTVYL 122

Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                      +     +      L        R+ + D  S +   L D+ L    +  
Sbjct: 123 A---------GELPENAEDDAVSNLGNFAGLPTRL-LTDPMS-EDLVLEDIVLIDPDKGN 171

Query: 175 NIISPL-------SIDSIKGSVIAEGTGNFDNKRSAFKITANFP--AKNKAISLKIQLFP 225
                +          + +  ++ E     D+  +        P  + + + +    L  
Sbjct: 172 GWGYEIVVDKLSSQASASRSDLLVEAKLRVDDTPATLLAVFTNPHNSADGSKTGPFDLQI 231

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV-R 284
                 +   G+L   +     +    V+      L   L  ++  + G   ++  +   
Sbjct: 232 GLPGGELRTSGDLDLRQPIAAVAAKLEVSISSLGNLLDLLDLRRV-IEGTASMTASHAGS 290

Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344
           I    +  +  +     +N   VS         S  GA+    ++      ++       
Sbjct: 291 IDALAMTELQLD--LQLENIASVSISGAVQNMVSGEGADLEFAVDVETGRSQDIAPQSVF 348

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378
            +  +    ++    E+    D   Q N +  ++
Sbjct: 349 QVDVERFSGAIKGDRERFFIADLTVQTNLASGEL 382


>gi|319942522|ref|ZP_08016832.1| hypothetical protein HMPREF9464_02051 [Sutterella wadsworthensis
           3_1_45B]
 gi|319803925|gb|EFW00843.1| hypothetical protein HMPREF9464_02051 [Sutterella wadsworthensis
           3_1_45B]
          Length = 854

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/246 (11%), Positives = 72/246 (29%), Gaps = 28/246 (11%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + +VL       +V +               R   E+  + ++ + + +     +   P+
Sbjct: 12  MAKVLTFTACAAAVGVALYAAAGYVGVPYAVRTVIEKNVSELLNRTVTLD---DVRFNPW 68

Query: 62  P-SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             +   + + I + E       +  L + A    L      + ++ ID   +N  ++ K 
Sbjct: 69  TWAFELRGLTIPE-EGSDPLLSLGLLRIDASSQTLFKLAPVLDEITIDGLKVNAVVNEKN 127

Query: 121 VSNWF-----------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
                                    S+   +    L  I V    ++  D+       L+
Sbjct: 128 RRELEKLLGGNDADKATQTAAKSADSSDAGLPQFALYNITVANSSLRYQDKSQGIDESLT 187

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
           DL++++        +  S+      V    +   +        T     K+    L +++
Sbjct: 188 DLSVKLPFVSTMESARESL------VTPALSLKLNGSAIEASGTTKPFGKSLEAQLNLKV 241

Query: 224 FPLAYP 229
             L   
Sbjct: 242 QRLDAA 247



 Score = 38.7 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/221 (11%), Positives = 62/221 (28%), Gaps = 29/221 (13%)

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF----- 125
              KE  +  + ++  +++       S   +V  + + QP     ++  G++        
Sbjct: 511 FALKEGKTTLASVKSAAVKLSEFSTASRTAKVESIAVVQPTAYAVMTKSGLNLSQLTVET 570

Query: 126 -------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLNLQIS 170
                         + +  +   N  L +  V  G +K  D+         +  +N  + 
Sbjct: 571 KPSTAKKTSKEETAKTNAAEPAWNWSLGQATVTNGSLKYRDESISPAASVEIPKINAALK 630

Query: 171 ARF----LNIISPLSIDSIKGSVIAEGTGNFDNKRSAF---KITANFPAKNKAISLKIQL 223
                         S D   GS+ A G        +            + +  +     L
Sbjct: 631 NVSSKSGTKSSVDFSADLGGGSLTAAGNFVLAPLSADIGVKGANIGLKSFSNLMQGYAGL 690

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIY--SGVFSVAGDFSKLLN 262
              +  +  D    +   ++Q ++   G  S+A        
Sbjct: 691 GAKSGTLEADGRATVRTQKEQNVFGWKGNASLASLDLTNAK 731


>gi|325105166|ref|YP_004274820.1| hypothetical protein Pedsa_2453 [Pedobacter saltans DSM 12145]
 gi|324974014|gb|ADY52998.1| hypothetical protein Pedsa_2453 [Pedobacter saltans DSM 12145]
          Length = 1045

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/383 (12%), Positives = 115/383 (30%), Gaps = 34/383 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58
           +++R  IGL  + +++ V        I+           A   +  ++     I +    
Sbjct: 20  IVKRFFIGLAIILALLAVLPLIFSKTIN-----NKISAWANENLDAEVKFS-NIGLSFFS 73

Query: 59  -LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
             P+ +V   DI +            K + +S+      +    + +   YI+   +N  
Sbjct: 74  HFPYLTVNVYDIDLKGSAPFKNETLLKAKEVSLGINLASVFEETLAINKFYIEDGFINVQ 133

Query: 116 LSSKGVSNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
             S G++N+          +     D   ++ +E I +K   +   D+    +      N
Sbjct: 134 TDSLGIANYNILKSDSTKKETPQKEDSETSLRIELIKIKNTHLIYNDRSLPVLIDARGFN 193

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
                +  + +  L+  +   S+     G                    ++S   +   L
Sbjct: 194 YTGKGKLSDAVFALTTHAQIDSLTFSYDGQEYLTNKNIDAKLLTHVNTNSLSFVFEKNEL 253

Query: 227 A-YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
               + I   G   +      Y   F++    SKL +L      + L          +  
Sbjct: 254 KINKLPITFTGKFAFINNG--YDLDFNIVSLQSKLEHLLSILPPNYLE---WTDKTKIS- 307

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
                   L + +     +    +++    + +    +      +     +    + N D
Sbjct: 308 -------GLSDINFSLKGQYLAEENKMPDAHLALKIKDGKLAYQDFPTPLQNLTLDLNVD 360

Query: 346 LKKDDIQYSVNKKEEKDNSHDKE 368
           L   D +  +   E+ + +  K+
Sbjct: 361 LPNADPKKVILNLEKLNFNLGKD 383


>gi|120603069|ref|YP_967469.1| hypothetical protein Dvul_2026 [Desulfovibrio vulgaris DP4]
 gi|120563298|gb|ABM29042.1| protein of unknown function DUF748 [Desulfovibrio vulgaris DP4]
          Length = 1354

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/296 (11%), Positives = 81/296 (27%), Gaps = 30/296 (10%)

Query: 3   RRVLIGLGFLFSV-VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R +L  L  L+   +++G   +P  +     R + ER     +     V+   K+ I PF
Sbjct: 29  RVILWSLLGLYIFWLVIGGLVLPPVV-----RSELERTMAQHLRATCTVE---KVTINPF 80

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    +++              LS+      L      +    + +P ++     +G
Sbjct: 81  TLRIRVLGVKVPDASGEGVLFGFRELSIAPSPAALFRLAPSLASARLVEPVVDITYFGEG 140

Query: 121 VSNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
             ++                 +   ++    +  G     D+     + ++D++  +   
Sbjct: 141 RFSFSDIVPPSEATTDDKATPVFPFVISDFELVDGSFIFRDEPRGVTHTIADIDFIVPFT 200

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PII 231
               +           +        D  R          A+ +     I    +A     
Sbjct: 201 SSLDMF------RDTPITPSLNATVDGSRMTVAGRLLPFAETQRTEFDIATEDVALEQFK 254

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
             L        +Q        +  +      +EL        G  ++SD  +    
Sbjct: 255 AYLAPFTPLRLEQGKARLELDLLVERLPSGQVELGLG-----GALRLSDILLNTPD 305



 Score = 40.3 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 75/252 (29%), Gaps = 24/252 (9%)

Query: 49  AVKGGIKIHILPFPSVFF---------KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE 99
           +  G  K+     P++            D+ +  +        ++ + ++   +      
Sbjct: 545 SFGGRAKVVFQSSPALQLTVSEGALMVDDLALAAQGKQGHALGVKHIGLKGLAVDYGKQS 604

Query: 100 IRVFDMYIDQPHLNFYLSSKGVSNWFQR--KSTMDMIHNVILEKIHVKGGRI----KIID 153
           IR   + +  P +N  L   G+         S  D    V  ++     G+     K+  
Sbjct: 605 IRAAVLALTSPSVNLILGDDGLPLLPASTGDSQPDTGKKVKGDRQRRAQGKAGSSTKVES 664

Query: 154 QESDQVYFLSDLNLQISARFLNIISP-LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212
           +           + + + R  N++   L +D    ++   G      + S  ++     +
Sbjct: 665 KARGTQEKARRGDTKTADRDWNLVLDSLELDGGTVNITERGAKAPTLQVSDLRVRTGALS 724

Query: 213 KNKAISLKIQLFPL-AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK-- 269
            +    L             + L GN+    +                 L++ L+     
Sbjct: 725 PDLTQRLPFDASMRWQKDGQLALKGNVRI--RPLDLDLNVKATKVDLAPLDIPLAMSTAM 782

Query: 270 ---SRLSGNFKI 278
               RLSG+ ++
Sbjct: 783 QAGGRLSGDVRL 794


>gi|46579374|ref|YP_010182.1| hypothetical protein DVU0961 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46448788|gb|AAS95441.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311233198|gb|ADP86052.1| hypothetical protein Deval_0888 [Desulfovibrio vulgaris RCH1]
          Length = 1354

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/296 (11%), Positives = 81/296 (27%), Gaps = 30/296 (10%)

Query: 3   RRVLIGLGFLFSV-VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R +L  L  L+   +++G   +P  +     R + ER     +     V+   K+ I PF
Sbjct: 29  RVILWSLLGLYIFWLVIGGLVLPPVV-----RSELERTMAQHLRATCTVE---KVTINPF 80

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    +++              LS+      L      +    + +P ++     +G
Sbjct: 81  TLRIRVLGVKVPDASGEGVLFGFRELSIAPSPAALFRLAPSLASARLVEPVVDITYFGEG 140

Query: 121 VSNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
             ++                 +   ++    +  G     D+     + ++D++  +   
Sbjct: 141 RFSFSDIVPPSEATTDDKATPVFPFVISDFELVDGSFIFRDEPRGVTHTIADIDFIVPFT 200

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PII 231
               +           +        D  R          A+ +     I    +A     
Sbjct: 201 SSLDMF------RDTPITPSLNATVDGSRMTVAGRLLPFAETQRTEFDIATEDVALEQFK 254

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
             L        +Q        +  +      +EL        G  ++SD  +    
Sbjct: 255 AYLAPFTPLRLEQGKARLELDLLVERLPSGQVELGLG-----GALRLSDILLNTPD 305



 Score = 39.5 bits (90), Expect = 0.84,   Method: Composition-based stats.
 Identities = 30/252 (11%), Positives = 74/252 (29%), Gaps = 24/252 (9%)

Query: 49  AVKGGIKIHILPFPSVFF---------KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE 99
           +  G  K+     P++            D+ +  +        ++ + ++   +      
Sbjct: 545 SFGGRAKVVFQSSPALQLTVSEGALMVDDLALAAQGKQGHALGVKHIGLKGLAVDYGKQS 604

Query: 100 IRVFDMYIDQPHLNFYLSSKGVSNWFQR--KSTMDMIHNVILEKIHVKGGRI----KIID 153
           IR   + +  P +N  L   G+         S  D    V  ++     G+     K+  
Sbjct: 605 IRAAVLALTSPSVNLILGDDGLPLLPASAGDSQPDTGKKVKGDRQRRAQGKAGSSTKVES 664

Query: 154 QESDQVYFLSDLNLQISARFLNIISP-LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212
           +           + + +    N++   L +D    ++   G      + S  ++     +
Sbjct: 665 KARGTQEKARRGDTKTADTDWNLVLDSLELDGGTVNITERGAKAPTLQVSDLRVRTGALS 724

Query: 213 KNKAISLKIQLFPL-AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK-- 269
            +    L             + L GN+    +                 L++ L+     
Sbjct: 725 PDLTQRLPFDASMRWQKDGQLALKGNVRI--RPLDLDLNVKATKVDLAPLDIPLAMSTAM 782

Query: 270 ---SRLSGNFKI 278
               RLSG+ ++
Sbjct: 783 QAGGRLSGDVRL 794


>gi|34497551|ref|NP_901766.1| transmembrane protein [Chromobacterium violaceum ATCC 12472]
 gi|34103406|gb|AAQ59768.1| probable transmembrane protein [Chromobacterium violaceum ATCC
           12472]
          Length = 1272

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/357 (12%), Positives = 97/357 (27%), Gaps = 39/357 (10%)

Query: 2   LRRVLIGLGF------LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55
           L+R L+ L                AFT  L  +   +R   E+  +  +G ++++   + 
Sbjct: 10  LKRSLLVLAVSLFTACALVSAAFAAFTFWLLPNLDQYRPRLEQSLSGALGHRVSIS-RLS 68

Query: 56  IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            H     P      + I     G     +  ++++  +  L S E+R+  M +D P +  
Sbjct: 69  GHWQDVAPQFELSGVSIANPVSGQ-ALTLSRVTVQPSWTSLWSWEVRLA-MRVDGPAVEL 126

Query: 115 YLSSKGVS-------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166
             S  G                       +    + ++  R+   D+        L   +
Sbjct: 127 RRSVGGTIYLNGFDLTSGPSSDNALGNWLLRQPSLEIRNARLSWEDERLGLPRLDLRQGS 186

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
           L +    L     LS           G G   +          +P  + ++ + +     
Sbjct: 187 LTLERNLLGHRVQLS----GVPAATLGKGFQLSANWRGDDINGWPQWSGSVKVALNGARA 242

Query: 227 AYPII------IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK------KSRLSG 274
                      +   G      +     G  S       + +   +          +L G
Sbjct: 243 DIWSRYMREMGVLHRGEGDGTLEMSFSDGSVSSLQADVSVRDAAYTPPSARELVLPQLQG 302

Query: 275 NFKISDG-----NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
             ++         +  S   L S    +      K +     +     + +  +  H
Sbjct: 303 KLQLDRQFSGSYKIAASELTLASSTGLAFDKSSIKGQWQPGAKGGGELTLDNVDVGH 359


>gi|170691359|ref|ZP_02882524.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
 gi|170143564|gb|EDT11727.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
          Length = 1395

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/327 (14%), Positives = 100/327 (30%), Gaps = 36/327 (11%)

Query: 2   LRRVL-IGLGFLFSVVLVGA---FTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55
           LRR L + L     +  + A     +   +      FR   E   +  +  +  + G + 
Sbjct: 27  LRRTLHVVLALALVLYFIAAGLFLGLRYVVLPRVDTFRPRIEATVSDKLHAQFTI-GKLA 85

Query: 56  IHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            H     P +   ++ I   +       I   +    +  L      +  + +DQP +  
Sbjct: 86  PHWSGFQPGLDITNLVIRDHDG-KPALTIPHATATLSWRSLWQFHPALSSLIVDQPDVLI 144

Query: 115 YLSSKGVSNWFQRK-------STMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166
                GV +            +       V  + I V+GG ++  D + D     L D+ 
Sbjct: 145 SRGGDGVLSVAGVPVPTRHSGNDTLSTWLVRQQAIVVRGGVLRWRDAQRDAPELALRDIR 204

Query: 167 LQISARFLNI----ISPLSIDSIKGSVIA-----EGTGNFDNKRSAFKITA---NFPAKN 214
           + I     +      +P     ++G +               K   +K  A     P   
Sbjct: 205 IAILNDGYDHRLALQAPPDGQLLRGPLDFRTHFRHAPLAAIGKPINWKGQAYVSTGPVDL 264

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270
             ++  I+     +   ID    + + +   + S    +AG    L       +L    +
Sbjct: 265 PTLARYIKFPIETFAGRIDNAIWVDFADG-RMTSASGQMAGADVALRVRPTQPKLLLPIA 323

Query: 271 RLSGNFKISDGN--VRISRYKLQSILP 295
                 +   G+  ++++  + +   P
Sbjct: 324 NFGWRLQAQQGDYELQLNDMRAELGQP 350


>gi|254253177|ref|ZP_04946495.1| hypothetical protein BDAG_02429 [Burkholderia dolosa AUO158]
 gi|124895786|gb|EAY69666.1| hypothetical protein BDAG_02429 [Burkholderia dolosa AUO158]
          Length = 1398

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/331 (14%), Positives = 107/331 (32%), Gaps = 37/331 (11%)

Query: 2   LRRVLIG---LGFLFSVVLVGAFTVPLFI---DWTDFREDFERQATLIVGKKIAVKGGIK 55
           LRRV      +G     V  GAF    ++      +FR   ER  +  +  ++++ G + 
Sbjct: 24  LRRVFKVTLAVGIGAYFVASGAFLGLRYVLLPRIDEFRPRIERTVSDKLHAQLSI-GKLS 82

Query: 56  IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            H     P V  +++ I  ++       +   +    ++ LL     +  + +D+P L  
Sbjct: 83  PHWSGMQPGVEVENLTIRGRDGQI-ALSVPHATAALSWISLLRLSPALSSLIVDRPDLVV 141

Query: 115 YLSSKGVSNWF-------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166
             ++ G  +         +  +       +  E I ++ G ++  D + D     LS + 
Sbjct: 142 ARAADGSLSIAGVGVPTTRGGNDTFSTWLLKQEAIVLRSGTLRWRDAQHDAPELALSGIR 201

Query: 167 LQISARFLNIISPLSIDSIK----GSVIAEGTGNFDNKRSAFKIT--------ANFPAKN 214
           L +        + L   +      G +               K +        +  P   
Sbjct: 202 LAVLNDGRTHKAALQAPANGTLLLGPLDFRARFTHRPLAPIGKPSNWTGDAYLSTGPVDL 261

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270
           + +S  I +    +   ID      +++     +G   + G    L       +L     
Sbjct: 262 QTLSRYIDMPLTIHAGRIDNAIWATFHDGHLRSAGG-DLQGADVALRVRPTQPQLDVPTV 320

Query: 271 RLSGNFKISDGN---VRISRYKLQSILPNSS 298
               +  ++ G    + ++R+  +   P   
Sbjct: 321 GFGWDMALNAGRDYTLHLTRFNAELGQPPLP 351


>gi|153005727|ref|YP_001380052.1| AsmA family protein [Anaeromyxobacter sp. Fw109-5]
 gi|152029300|gb|ABS27068.1| AsmA family protein [Anaeromyxobacter sp. Fw109-5]
          Length = 874

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 89/317 (28%), Gaps = 42/317 (13%)

Query: 37  ERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS-FESKIEGLSMRAEFLPL 95
               +  +G+ + + G +   +     V   D++I   E      +++    + A  L  
Sbjct: 44  AATLSQQLGRPVEIGG-VATKLWGGLGVRVTDVKIGAGEGEPLPLAELRRAEVEANLLRA 102

Query: 96  LS---GEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN---------------- 136
           L     EI+V +  ++   +N      G +N  +    +                     
Sbjct: 103 LRTGGEEIQVDEAVLEGLRVNVVKLPDGTTNLERVADRLAKPEEERPAEPAPPEQPPFRL 162

Query: 137 VILEKIHVKGGRIKIIDQE--SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
           + +++  V+  RI  +D+     +  ++ DL++++          L + +   +      
Sbjct: 163 LRVDRAAVENARIAFLDRTVPGAKELYVDDLDVEVKDLETGKPLELVVRAAVLAQTQNLE 222

Query: 195 GNFDNKRSAFKIT--------------ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
                      +                +  A      L  +       +  DL G +  
Sbjct: 223 LRVKAAPLPASLEVVPEEVVLKVQPIVLDPLAPFLPAELGFRGGRFQADLSADLGGAVPG 282

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS--DGNVRISRYKLQSILPNSS 298
            E      G F               A    L  + +     G +RI + +L +    ++
Sbjct: 283 GEGPLEVRGGFRATQLAF-AGQEGGKALDVALDSDLEADMKAGELRIGKLELTAGP--AA 339

Query: 299 TDEDNKTKVSQDEENLL 315
                +      +    
Sbjct: 340 LVGKGRATGLNGDSPRF 356


>gi|240139671|ref|YP_002964148.1| hypothetical protein MexAM1_META1p3123 [Methylobacterium extorquens
           AM1]
 gi|240009645|gb|ACS40871.1| conserved hypothetical protein, AsmA family protein; putative
           exported protein [Methylobacterium extorquens AM1]
          Length = 632

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/334 (13%), Positives = 101/334 (30%), Gaps = 12/334 (3%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LRR L  L        + A  +P  I+         R      G  +A +G  ++ +LP 
Sbjct: 3   LRRTLSALALGLVAAGLVAACLPWSIEAPGTARFVSRGLQQGWGVALAARGRTEVVLLPL 62

Query: 62  PSVFFKDIRIDQKEDGSFESKI-EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS-K 119
           P + F+D+R+ + +           LS++     LL+G + V  + +D   L     +  
Sbjct: 63  PRIVFEDVRLTEGDAAGPVLAAGGNLSLQLGLAALLTGRVEVDSLTLDGSELVLPQEAGD 122

Query: 120 GVSNWFQR--KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
              +        ++         +I +    +K  D     +    D++L IS    +  
Sbjct: 123 PRWSAAAERLTHSIAGADGDRPRRIILARCALKGRDPRDGTLQTARDVDLTISWPAWSES 182

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
             ++         A  T       + F    +                    +   L  +
Sbjct: 183 LAVNGGFRWSDGSARITLTDLRPYALFSGGESPFTAALTWPTGSLSAQGNGSLRDGLKAS 242

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297
              + +        ++ G     L L    +   + G+F+ + G ++     ++S     
Sbjct: 243 GTGSLQTRSLHKTLALTG---GGLALSPFVEDFAVEGSFEAAAGQIQFPSVTVRS----D 295

Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331
               +     +   +         A    +L+  
Sbjct: 296 GNVLEGAGSATFGPKRN-AVQATLAAENLNLSPL 328


>gi|16330525|ref|NP_441253.1| hypothetical protein sll1586 [Synechocystis sp. PCC 6803]
 gi|1653016|dbj|BAA17933.1| sll1586 [Synechocystis sp. PCC 6803]
          Length = 1749

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/380 (11%), Positives = 110/380 (28%), Gaps = 29/380 (7%)

Query: 16  VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE 75
            + G  T   +    +      +     + + + +     + +     + F    I    
Sbjct: 40  AIAGGVTYGHYWVQRNVSPLVGQAVEHFLNRPVELGPLTSVSL---THLEFGATSIPATA 96

Query: 76  DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH 135
                 +++ L +       L  E     +   +P   F     G   W      +    
Sbjct: 97  TDPNWVQLQSLKISYNPWQYLQDEHLGLTITAMEPQAYFEQGRSGQW-WHTEMGQLAEDF 155

Query: 136 NVILEKIHVKGGRIKIIDQESDQVYFLS-DLNLQISARFLNIISPLSIDSIKGSVIA--- 191
              LEK+ V+ GR  ++ +   Q       L L  +  +      L    ++G ++    
Sbjct: 156 PFQLEKLIVRRGRGTVVSRNGHQALNQPIQLRLNDAQFWQGSNQELFRFRLQGQLLPLVE 215

Query: 192 -EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID---LFGNLFW---NEKQ 244
                N +      +       K++ + L      L  P+      L  +L     +++ 
Sbjct: 216 RHSYLNLEGTIDPAQERWQLQVKSRHLPLTALKQILPLPLNFQRGTLDSDLAIAVEDQQL 275

Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
               G   +     +L   +L+   + ++G        +++ + K Q     + +    K
Sbjct: 276 ASLDGEVDLHQASLQL--PQLARPLTAINGPLTFQGRKIQLGQVKGQLGEIQAQS----K 329

Query: 305 TKVSQDEENLLNFSENGAESMHDLN----ETDFFEEEEKKNKNDDLKKD--DIQYSVNKK 358
             +   +   L  +    E                   + +    ++    + Q +V  +
Sbjct: 330 GHIDWQDGFNLAIATAPLEVNKIFQGLQFPPATMPISGQLSSTVTIQGPLENPQINVALQ 389

Query: 359 EEKDNSHDKENQE--NFSGD 376
           +   NS   EN    +F  +
Sbjct: 390 KAGKNSLQIENLALDDFQAN 409


>gi|307943583|ref|ZP_07658927.1| AsmA family protein [Roseibium sp. TrichSKD4]
 gi|307773213|gb|EFO32430.1| AsmA family protein [Roseibium sp. TrichSKD4]
          Length = 949

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 50/343 (14%), Positives = 113/343 (32%), Gaps = 48/343 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+L+GL  L  +++  A  +P F+     +     Q     G ++ + G + + + P 
Sbjct: 1   MRRLLLGLASLLFLLVTAALVIPFFLPKDLIKNQVIAQVDQQFGWRLRLDGPVSLSLFPG 60

Query: 62  PSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            ++  + I +  +        +K EGL +   +  LL G+IR+  +++++P +   +   
Sbjct: 61  FALNAEQIGLSGEAGADGIEFAKAEGLKVGLAWGGLLGGDIRITGVHLEKPGILMDIGPS 120

Query: 120 GVSNWFQR------------------------------KSTMDMIHNVILEKIHVKGGRI 149
           G+++W  R                               S+   +  + ++++ +  G +
Sbjct: 121 GLTSWEPRRRFGTNTPDAPAREIETANESAAPAPSQDQSSSTAFLERIGIDQLTISDGMV 180

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209
           +  D  S   + +             +   LS  S+ G V  E    F  K  +     +
Sbjct: 181 RYTDHRSGTDFRV-----------AALNLSLSASSLTGVVELESDFQFQEKPLSVSGQID 229

Query: 210 FPAKNKAISLK-IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF----SKLLNLE 264
            P    A  ++ + L   +  + I L G+      Q       S            +   
Sbjct: 230 NPLAFAAGEVRPLLLNIASNEVKIGLEGSAGLKPLQIDLVVQGSAPSANDLLALADVTPN 289

Query: 265 LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                  L          + ++         + S   D    +
Sbjct: 290 RDLGAFELGAKVTGDPTRITVADLAATLGSLSVSGSSDTDLSL 332


>gi|226946301|ref|YP_002801374.1| hypothetical protein Avin_42760 [Azotobacter vinelandii DJ]
 gi|226721228|gb|ACO80399.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
          Length = 981

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/332 (12%), Positives = 110/332 (33%), Gaps = 32/332 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + L       +            +     ++   RQ    V +   ++   ++   PF
Sbjct: 1   MPKGLKPALVTLAAAPALYGLFGFLVLPGVAQQVINRQLPRFVTQPANLE---RLEFNPF 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    +R+ +  +       E L  + ++  L SG + + ++ +++PH+   L  +G
Sbjct: 58  TLELTLHRLRLGEAGNEQ--LAFERLYGKLQWDSLWSGHLHLAELQLERPHVEVLLDKQG 115

Query: 121 VSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS----DL 165
             N             Q +        V L++  +  G+I   DQ+  +   +      L
Sbjct: 116 ELNLAHLFKLPPASPEQEEEPAGAPFPVHLDRFLLSAGQIHFQDQQPSEPVEVRYDALQL 175

Query: 166 NLQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANF-------PAKNK 215
            ++      N  + L++ +     G +   G  +    RS+ K+  +        P    
Sbjct: 176 EVRNLGTLPNDTAELTLQASGPNAGRIDWSGQFSLVPMRSSGKLGIDQLGLATWWPYVRN 235

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL-SG 274
           ++ L ++   L+      L     +  +    +   +     +         +   +   
Sbjct: 236 SVPLVLENGTLSLSSDYQLDLAEGFRLQLQNAALKLAPFAIKAPDGRPLARLQSLEVGKT 295

Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
           +  +++  V I + + Q +   ++ + D +  
Sbjct: 296 SLDLAERRVSIGQVQGQGLETWAAREADGELD 327


>gi|317486259|ref|ZP_07945092.1| hypothetical protein HMPREF0179_02450 [Bilophila wadsworthia 3_1_6]
 gi|316922505|gb|EFV43758.1| hypothetical protein HMPREF0179_02450 [Bilophila wadsworthia 3_1_6]
          Length = 1225

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/379 (12%), Positives = 114/379 (30%), Gaps = 29/379 (7%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61
           R  L G+G L ++    A ++P  +     R   E Q +  V   + ++    + + PF 
Sbjct: 45  RACLFGIGLLCALWTALAVSLPPTV----LRGVVESQLSEAVNAPVTIE---SLSVNPFT 97

Query: 62  PSVFFKDIRID----QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
             +  + +R+               IE L +R               + +  P L+    
Sbjct: 98  LGIAVRGVRVPYLEETGTPDGALLTIERLDIRPRLRLFADAAPIQAALRVYNPVLDITYL 157

Query: 118 SKGVSNW------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS- 170
             G+ ++           T        L  + +KGG I + D     V+ +SD+N  +  
Sbjct: 158 GNGLFSFSKLLPAPSGADTAPDTPLFALSDLDLKGGTILLRDGPVGMVHTVSDVNFHVPL 217

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
            R  ++    ++ ++      +  G  +      + T         +    +      P+
Sbjct: 218 LRSADLPFAPTLSALVNGTRIDVEGRTEPDAETLRTTFAIHTAPLHMEHFKRYLSDFTPL 277

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKSRLSGNF-----KISDG 281
            ++  G +  +    +                   + E++  +  + G        + D 
Sbjct: 278 NLN-SGTVALDMLFTLSQPHLGRVESSLSGTVKVEDAEIATPEGTIVGRLRRGQAALKDF 336

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341
            +   R +L  +  +       + K  + +        +              E  +   
Sbjct: 337 TLSERRIRLDEMELDGLYLRVGRDKAGRIDWVDWLSGTDANPENLSPETPFVVEGADLIL 396

Query: 342 KNDDLKKDDIQYSVNKKEE 360
           +N D    D   +  ++ E
Sbjct: 397 RNSDFTWVDASLADTQQIE 415



 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/228 (11%), Positives = 59/228 (25%), Gaps = 19/228 (8%)

Query: 40  ATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE 99
            +  +   I  + G  + I    S+  +D+R+         + +  LS         S  
Sbjct: 736 LSANLDATITEEKGKDLGIQASGSLTVRDLRLKDARTEKVYAVLRRLSADTFRFSSASSS 795

Query: 100 IRVFDMYIDQPHLNFYLSSKGVSNWF------QRKSTMDMIHNVILEKIHVKGGRIKIID 153
               +M +D   ++  L++    +        Q            +  + ++   +   D
Sbjct: 796 FEAKEMLLDLLRMDVALNADKTLDILECVPKKQTGQEPSSPFRFSVASLRLQDAALLFRD 855

Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213
           Q    V  + D+N  +S    +                  TG           + N  + 
Sbjct: 856 QAHGSVSAVQDINATVSGLSSSGGLS----------DIVLTGQIGGAPITLSGSCNPFST 905

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261
             A  L      +                  P+  G   +   F+   
Sbjct: 906 PPAAKLAFTAKGVDLARY---SAYTRAYLGYPVVQGRLDLESAFATSG 950



 Score = 45.6 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/287 (11%), Positives = 81/287 (28%), Gaps = 30/287 (10%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +V  +D  I   E  +   ++       +   L    IR+ +M +D  +L       G  
Sbjct: 307 TVKVEDAEIATPEG-TIVGRLRRGQAALKDFTLSERRIRLDEMELDGLYLRVGRDKAGRI 365

Query: 123 NWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS----DLNLQI 169
           +W              + +    V    + ++      +D        +     D  +  
Sbjct: 366 DWVDWLSGTDANPENLSPETPFVVEGADLILRNSDFTWVDASLADTQQIEITGVDGRIAE 425

Query: 170 SARFLNIISPLSID---SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
            +      + + +    S +G +  +G G          +  +         L  +    
Sbjct: 426 YSTRPGARTAMRLSFGISTEGVLAVDGEGTLTPPSLNASLWVDDLPLIVLRPLLGETPLN 485

Query: 227 AYPIIIDLFGNLFWNEK--------QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278
                I + G + +            P  +   +V G  + +  L      + LS   + 
Sbjct: 486 DILGRIAIKGGVRFGSDGKTPQTPAAPASATSLAVTGAEASVSALSFGRG-NSLSAADRK 544

Query: 279 SDGNVRISRYKLQSILPN----SSTDEDNKTKVSQDEENLLNFSENG 321
           +  +      +++++  N     +       K    E   +  + +G
Sbjct: 545 AGKDAGSPAVRIRALTFNGLHFDTQARSASVKTLSVEAPEVRVTSSG 591


>gi|206561618|ref|YP_002232383.1| hypothetical protein BCAL3279 [Burkholderia cenocepacia J2315]
 gi|198037660|emb|CAR53603.1| putative membrane protein [Burkholderia cenocepacia J2315]
          Length = 1399

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 100/331 (30%), Gaps = 37/331 (11%)

Query: 2   LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55
           LRRV      +      V       +   +     +FR   ER  +  +  ++++ G + 
Sbjct: 24  LRRVFRVTLAVGIGTYFVASGAFLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GKLS 82

Query: 56  IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            +     P V   ++ I  ++       +   +    ++ LL     +  + +DQP L  
Sbjct: 83  PNWSGMQPGVELTNLTIRGRDGKV-ALSVPHATAALSWMSLLRLSPALSSLIVDQPDLVV 141

Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166
             ++ G  +            +       +  E I ++GG ++  D + D     LS + 
Sbjct: 142 ARAADGSLSVAGVGVATTHGGNDTFGTWLLKQEAIVLRGGTLRWRDAQHDAPELVLSGIR 201

Query: 167 LQISAR----FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT--------ANFPAKN 214
           L +          + +P +   + G +               K          +  P   
Sbjct: 202 LAVLNDGRVHKAALQAPANGTLLLGPLDFRARFKHKPLAPIGKPANWTGDAYLSTGPVDL 261

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270
           + ++  + +    +   ID      + +     +G   + G    L        L     
Sbjct: 262 QTLTRYLDVPLTIHAGRIDNAIWATFGDGHLRSAGG-DLQGADVALRVRPTQPRLDVPTV 320

Query: 271 RLSGNFKISDG---NVRISRYKLQSILPNSS 298
               +  +  G    + ++R+  +   P   
Sbjct: 321 GFGWDMVLDSGHDYTLHLTRFNAELGQPPLP 351


>gi|113954688|ref|YP_731084.1| hypothetical protein sync_1880 [Synechococcus sp. CC9311]
 gi|113882039|gb|ABI46997.1| Uncharacterized conserved protein [Synechococcus sp. CC9311]
          Length = 1467

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 51/327 (15%), Positives = 110/327 (33%), Gaps = 15/327 (4%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           R V+ GLGF          T    ++      R   E+Q ++ +G  I +     +    
Sbjct: 4   RVVISGLGFTVVAAAAVWLTADRLLEQAVNGLRPSLEQQLSVPLGHPIEIGPYRGLGFD- 62

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    I+I      +   +++ LS+  + L  +     V    +   ++N   + +G
Sbjct: 63  --GIGIGPIKIRPGTKDASSLRVQKLSLGIDPLSSIRHLRLVVVARLKGAYVNLRRNQQG 120

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                  +S  + +H V L    +   +I++    + Q+       L+++ ++ + +  +
Sbjct: 121 QFWVPGPRSDGEFLHRVDLRVRLIDPAKIRVE-PANLQLSLAGAARLRLNEKWADGVFQV 179

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
            +   +GSV  +G  ++D               +    L     P+     +       W
Sbjct: 180 GLP-DRGSVKLKGLAHWDRPEFRLTTRLKRIRLDNLQGLLPMAQPIQLRGQVGGDLRFEW 238

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300
           N  Q    G  SV G       L+   +  +L       D  + I R + +     +S  
Sbjct: 239 NRGQTSCGGGLSVVGFKVSGQPLQHPLESRQL--RLHCDDDRLTIPRSQWRYGPYRAS-- 294

Query: 301 EDNKTKVSQDEENLLNFSENGAESMHD 327
              +  ++Q      + S    E   D
Sbjct: 295 LGGRFHLNQ----RFDLSATLKELNQD 317


>gi|322417663|ref|YP_004196886.1| hypothetical protein GM18_0121 [Geobacter sp. M18]
 gi|320124050|gb|ADW11610.1| hypothetical protein GM18_0121 [Geobacter sp. M18]
          Length = 541

 Score = 80.7 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 61/372 (16%), Positives = 127/372 (34%), Gaps = 36/372 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV-GKKIAVKGGIKIHILP- 60
           + VL  LG L +++L+       FID    R   ER+    + G ++ +    K+H  P 
Sbjct: 20  KAVLWVLGILVALLLI-VVIASFFID-EPLRRTTERRMNQSLKGYQVRL---PKLHFSPI 74

Query: 61  FPSVFFKDIRIDQ-KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF---YL 116
             S+  K + + Q        ++   L    ++  +LSG++   DM +D+P ++     L
Sbjct: 75  GLSITLKGLTVSQQAHPEPPVAEFPYLRTSVQWREILSGKLVG-DMSLDEPKIHVNLKQL 133

Query: 117 SSKGVSNWFQRKSTMDMI----HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
            S+  S    ++          + + +  + +    I  ID++ D+   L+ LNL+ +  
Sbjct: 134 RSEAASTVPMKQKGWQQAVEAIYPLKINLLKINDASITYIDEDPDRPLKLTHLNLEANNI 193

Query: 173 FLNIISP---LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
               +      S   ++  +   G G+   + +        P      +L++   P+AY 
Sbjct: 194 RNIHLPDKVYPSDFHLETDIFGSGHGSVAGRANFLA----EPTPAVKAALELAKVPIAYF 249

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS---GNFKISDGNVRIS 286
             +    N+          G              +L+    +L              R  
Sbjct: 250 APVLARSNVRIQGGVLSADGDIEYGRKVQTARLKKLTIHGVKLDYVHTPETAQAEKRRAR 309

Query: 287 RYKLQSILPNSSTDED------NKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKK 340
           + K  +    +  D          T  +    N      +G +    L++ DFF +    
Sbjct: 310 KVKEAAREVTNKPDLILTVEHLGLTGANLGVINDF----DGRKVRLFLSDADFFLDNFSN 365

Query: 341 NKNDDLKKDDIQ 352
             +    K  + 
Sbjct: 366 QFSKGPAKAKLS 377


>gi|145589956|ref|YP_001156553.1| membrane protein-like protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048362|gb|ABP34989.1| membrane protein-like protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 1384

 Score = 80.7 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/316 (10%), Positives = 94/316 (29%), Gaps = 26/316 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDF---REDFERQATLIVGKKIAVKGGIKIHI 58
           L+R+LI +G + +++++G   V  ++ W      +   E+     +G ++++   +++  
Sbjct: 26  LKRILILIGLVCALLVIGHLGV-RYVLWPQLEKSKASVEKIIGARIGAEVSID-KLQVAW 83

Query: 59  -LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
              +P+   + +R +  E       I  +     +           D++ +   +    +
Sbjct: 84  TGLWPNFEIEGLRFNSAEKSKPLLLINKIYGELSWKSFYHLAPYFRDLHFEGAEIYAQRN 143

Query: 118 SKGVSNWFQRKSTMDM------IHNVILEKIHVKGGRIKIIDQESDQVYF---LSDLNLQ 168
           + G  +        +               I V   ++   DQ++ +      +  L+L 
Sbjct: 144 NNGAISIAGISIDSNSNDFSAENWLFSQNSIEVNNAKLFWDDQKNKRPITSVEIVSLSLD 203

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTG--NFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
              R       L+     G    + +   +   +   ++        N +          
Sbjct: 204 NGIRKHEGSIRLNTPWANGPAEMKVSFVPHLAGQAGNWRDWIGTIYWNLS-------DLD 256

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
              I      NL   E     +G   +           ++A   +L          + + 
Sbjct: 257 LKQISQQFSINLTTLEGILSSNGQLKIDNGHPDGGEFYVAAD--QLIIQTSKDTEAIALG 314

Query: 287 RYKLQSILPNSSTDED 302
           R +       +     
Sbjct: 315 RLETNLSQETNDGLLS 330


>gi|254562081|ref|YP_003069176.1| hypothetical protein METDI3686 [Methylobacterium extorquens DM4]
 gi|254269359|emb|CAX25325.1| conserved hypothetical protein, AsmA family protein; putative
           exported protein [Methylobacterium extorquens DM4]
          Length = 632

 Score = 80.7 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 101/334 (30%), Gaps = 12/334 (3%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LRR L  L        + A  +P  I+         R      G  +A +G  ++ +LP 
Sbjct: 3   LRRTLSALALGLVAAGLVAACLPWSIEAPGTARFVSRGLQQGWGVALAARGRTEVVLLPL 62

Query: 62  PSVFFKDIRIDQKEDGSFESKI-EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS-K 119
           P + F+DIR+ + +           LS++     LL+G + V  + +D   L     +  
Sbjct: 63  PRIVFEDIRLTEGDAAGPVLAAGGNLSLQLGLAALLTGRVEVDSLTLDGSELVLPQEAGD 122

Query: 120 GVSNWFQR--KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
              +        ++         +I +    +K  D     +    D++L IS    +  
Sbjct: 123 PRWSAAAERLTHSIAGADGDRPRRIILARCALKGRDPRDGTLQTARDVDLTISWPAWSDS 182

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
             ++         A  T       + F    +                    +   L  +
Sbjct: 183 LAVNGGLRWSEGSARITLTDLRPYALFSGGESPFTAALTWPTGSLNAQGNGSLRDGLKAS 242

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297
              + +        ++ G     L L    +   + G+F+ + G ++     ++S     
Sbjct: 243 GTGSLQTRSLHKTLALTG---GGLALSPFVEDFAVEGSFEAASGQIQFPSVTVRS----D 295

Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331
               +     +   +         A    +L+  
Sbjct: 296 GNVLEGAGSATFGPKRN-AVQATLAAENLNLSPL 328


>gi|256421431|ref|YP_003122084.1| hypothetical protein Cpin_2392 [Chitinophaga pinensis DSM 2588]
 gi|256036339|gb|ACU59883.1| hypothetical protein Cpin_2392 [Chitinophaga pinensis DSM 2588]
          Length = 1075

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 55/405 (13%), Positives = 127/405 (31%), Gaps = 46/405 (11%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58
           +LR +LI +  L  +   G     L+           ++    +  ++ + G +      
Sbjct: 9   ILRILLIPVAILIIL--AGIAVGVLYSQQQRLINLAIKELNKQLPGELVIGGSMISPFQN 66

Query: 59  LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
            P+ S+  KD++    +   G    ++E L +      +L  +  V  +++ + HL+   
Sbjct: 67  FPYISIGLKDVKFFATKQKTGRPMYQLEKLYVGFSLPDILQQKYNVKVIFLKKGHLDLVR 126

Query: 117 SSKGVSNWFQRKSTMDMI----------HNVILEKIHVKGGRIKIIDQESDQVYF--LSD 164
            + G  N  +                   ++ ++KI +    I   D+ S Q     +S 
Sbjct: 127 DNNGNLNIVEANRIQQDTIATAAAESAALDLDIKKIVLSELEISFTDRPSGQHVNARISK 186

Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
           +     A    I +  +   +   +  + +  F NK      T  +    + ++L     
Sbjct: 187 IKTSFRAADNKIFADFTGGMVADYITPKDSSLFRNKHLNADFTVTYDQTKEFVTLT---- 242

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                      GNL   +     SG   +    +    ++          +F  +    +
Sbjct: 243 ----------KGNLKLEDFSFSVSGTADLKNGNNVDFKIKGDKPDIGQLMSFAPASVADQ 292

Query: 285 ISRYKLQSILPNSSTDEDNK--------TKVSQDEENLLNFSENGAESMHDLNETDFFEE 336
           + ++K              K         +V+   EN    + +  +      ++  F+ 
Sbjct: 293 VKQFKYD-GRLYFDGLVKGKLAGEQMPLIQVNFGCENGWLMNPDAKK----RIDSLGFKG 347

Query: 337 EEKKNKNDDLKKDDIQYSVNK-KEEKDNSHDKENQENFSGDKMIL 380
                    LK  ++         EK         ++F+  KMI+
Sbjct: 348 YYTNGAEHSLKTSELHLMNMSAIPEKGIFKGNFVMKDFTDPKMIM 392


>gi|157961426|ref|YP_001501460.1| hypothetical protein Spea_1600 [Shewanella pealeana ATCC 700345]
 gi|157846426|gb|ABV86925.1| protein of unknown function DUF748 [Shewanella pealeana ATCC
           700345]
          Length = 1073

 Score = 80.3 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 54/415 (13%), Positives = 120/415 (28%), Gaps = 71/415 (17%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61
           R +LI      S   V    VP  I      +   +Q + ++ + + ++   ++ I PF 
Sbjct: 23  RLLLIVSAIYLSFTAVLGLLVPYII-----VKQAPKQLSELLQRPVTLE---RVKINPFT 74

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             V   +  + +  +       + LS   +F   L +    V D+ +  P +N       
Sbjct: 75  LEVAVDNFELHETNN-QPFVGFKQLSFEYQFWNSLFNTAFSVADVTLAAPSINVERIKAP 133

Query: 121 V------------------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
                              +   ++ +    + + I+  + +    +  ID  ++     
Sbjct: 134 QSLRFNFSDIIDTLANRPKTEQSEQSTESSRLPHFIVTNLAIVNADLSFIDHVTNSQLHY 193

Query: 163 SDLNLQISARFLNIIS-----PLSIDSIKGSVIAEGTGNFDN--------KRSAFKITAN 209
            +LNL +     N +       L              G            + S   I  +
Sbjct: 194 PELNLNVKFFDSNHVIKSTLENLGDKQQTNHYAIHVVGRNGGEIATQGLVQLSPLNIVGD 253

Query: 210 FPAKNKAIS-----LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE 264
               N  +      +  Q  P+     + L  N     +   +     +       LN +
Sbjct: 254 VQLTNIQLPQFWSFISEQFAPVLTSGRLSLSSNYQLQIQNDKFEVTTDLGLVKLDELNFD 313

Query: 265 ------LSAKKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317
                 ++   + L G  F +    V         ++ N+  ++D               
Sbjct: 314 YQEQSIINLPMTALKGIAFDLQQQTVTAETLDTHGLVLNTKINKDG-------------- 359

Query: 318 SENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQEN 372
             + ++    +NE   F +   +     + K +I  S     E  +S   E  + 
Sbjct: 360 -IDLSKLFTPINEKPVFTQ--AQAPKPKITKPEITKSEKNSSEATSSESIEPADT 411


>gi|289804052|ref|ZP_06534681.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 245

 Score = 80.3 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/268 (10%), Positives = 76/268 (28%), Gaps = 50/268 (18%)

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS------ 122
           + +  +       + + + +     PLLS ++ V  + +    +     ++ V       
Sbjct: 1   MTLTARGASEPLVRADNMRLDVALWPLLSHQLHVKQVMLKGGVIQLTPQTEAVRSDDAPV 60

Query: 123 ---NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
              +        D   +  +  + V  G + +   E+D    + D+ L +     +  + 
Sbjct: 61  APKDNTLPDVAEDRGWSFDIRSLRVA-GSVLVFQHENDDQVTVRDIRLNMEQDAEHRGT- 118

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
                                   F    N   ++ A+S    +    YP          
Sbjct: 119 ----------------------FDFSGRVNRDQRDLALSFSGTVDASDYP---------- 146

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
            N    I    + + G       +E    + +L   ++ +   +  +   L +    + +
Sbjct: 147 HNLTAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA----NDS 199

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHD 327
                 +V+  E+         ++   D
Sbjct: 200 SLTGHVQVTLAEQPEWQIDLRSSKLNLD 227


>gi|163852335|ref|YP_001640378.1| AsmA family protein [Methylobacterium extorquens PA1]
 gi|163663940|gb|ABY31307.1| AsmA family protein [Methylobacterium extorquens PA1]
          Length = 632

 Score = 80.3 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 102/334 (30%), Gaps = 12/334 (3%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LRR L  LG       + A  +P  I+         R      G  +A +G  ++ +LP 
Sbjct: 3   LRRTLSALGLGLVAAGLVAACLPWSIEAPGTARFVSRGLQQGWGVALAARGRTEVVLLPL 62

Query: 62  PSVFFKDIRIDQKEDGSFESKI-EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS-K 119
           P + F+DIR+ + +           LS++     LL+G + V  + +D   L     +  
Sbjct: 63  PRIVFEDIRLTEGDATGPVLAAGGNLSLQLGLAALLTGRVEVDSLTLDGSELVLPQEAGD 122

Query: 120 GVSNWFQR--KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
              +        ++         +I +    +K  D     +    D++L IS    +  
Sbjct: 123 PRWSAAAERLTHSIAGADGDRPRRIILARCALKGRDPRDGTLQTARDVDLTISWPAWSES 182

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
             ++         A  T       + F    +                    +   L  +
Sbjct: 183 LAVNGGLRWSDGSARITLTDLRPYALFSGGESPFTAALTWPTGSLNAQGNGSLRDGLKAS 242

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297
              + +        ++ G     L L    +   + G+F+ + G ++     ++S     
Sbjct: 243 GTGSLQTRSLHKTLALTG---GGLALSPFVEDFAVEGSFEAAAGQIQFPSVTVRS----D 295

Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331
               +     +   +         A    +L+  
Sbjct: 296 GNVLEGAGSATFGPKRN-AVQATLAAENLNLSPL 328


>gi|116075437|ref|ZP_01472697.1| hypothetical protein RS9916_27794 [Synechococcus sp. RS9916]
 gi|116067634|gb|EAU73388.1| hypothetical protein RS9916_27794 [Synechococcus sp. RS9916]
          Length = 1456

 Score = 80.3 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/315 (11%), Positives = 90/315 (28%), Gaps = 18/315 (5%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65
           L+G G  F++  + A  +         R   E+Q +  +G  + +     +       + 
Sbjct: 9   LVGGGAWFALDRLAASLL------DQMRPQLEQQLSKPLGHPLRIGEFRGLRFW---GIA 59

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
                +D     +  + ++ + +  + L  L     V  + +    LN   +++G   W 
Sbjct: 60  LGPTTVDSGPSDASTASVQSVGIAFDPLASLQRWKPVAVVRLQGARLNLRRNAQGAY-WV 118

Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
              S  +    + L    +   +++I      Q        +Q+   + +    +     
Sbjct: 119 PGSSGDEPPPKLDLTIQLIDPAQVRIE-PADLQFSVAGQGAVQLDQSWGDGAFQVVFP-E 176

Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
           +G +     G +       +             L      ++    +     L W   Q 
Sbjct: 177 QGRLGLRLKGGWRKPEVDVQAKIEKLRLRSFQGLIPTANAVSLDGQLGGDLRLGWRSGQI 236

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
              G  S+     +    + S +  +L          ++I            S       
Sbjct: 237 SCGGGLSLVNFSLQTDGAQGSLRSPQL--QMSCKSDRLQIVPSAWSYG----SYRATLAG 290

Query: 306 KVSQDEENLLNFSEN 320
            V+ +    L F  +
Sbjct: 291 DVALNRRFDLRFKLH 305


>gi|37522510|ref|NP_925887.1| hypothetical protein glr2941 [Gloeobacter violaceus PCC 7421]
 gi|35213511|dbj|BAC90882.1| glr2941 [Gloeobacter violaceus PCC 7421]
          Length = 1556

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/357 (10%), Positives = 105/357 (29%), Gaps = 22/357 (6%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93
              E Q +  +   + + G ++  +LP+  +    + +   +      +    S+    L
Sbjct: 34  AQAEVQLSRTLKTPVRL-GRLQA-LLPW-RIAVGPVSVASPK-KPDLLEAPSASVGFNLL 89

Query: 94  PLLSGEIRVFDMYIDQPHLNFYLSSKGVSN---WFQRKSTMDMIHNVILEKIHVKGGRIK 150
               G+     + +++P L     ++G  N   +   ++      + +L ++ +      
Sbjct: 90  RFAFGQGLDARIRVEKPVLRLRRDAQGRFNLPSFAAGETRSGGTIDKLLSRVEIDDATFV 149

Query: 151 IIDQE-SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA- 208
             D+    +   L+ +++            L+    +G V AEG  + D+  +       
Sbjct: 150 YDDRVLGGKSLTLTGIDVLADIGPTGAAYTLNAPFGRGEVQAEGNSDLDDFDTTIDARLR 209

Query: 209 NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268
           N P    A+ L +           +    L         SG   + G    L        
Sbjct: 210 NIPVATAAVLLNLG-DLSVRGGTAEGAVQLRLKNGVFAASGPLRLTGGELLLRPYRAPLT 268

Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328
              ++         + + R + +     + +        +  E+  L+    G       
Sbjct: 269 NLDVAAKLAWP--KLNLERIEGRL----AGSRVSGTGAFNLPEDLGLDLIVAGPLEQLVP 322

Query: 329 N------ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                            + +    + D +  +   + +     D+    NF  ++ +
Sbjct: 323 AFTSPPVPVRGVTRTALQARIPLARPDRLTATARVRAQTPVQVDRLVVNNFQAEQQL 379


>gi|294673070|ref|YP_003573686.1| hypothetical protein PRU_0299 [Prevotella ruminicola 23]
 gi|294472196|gb|ADE81585.1| conserved hypothetical protein [Prevotella ruminicola 23]
          Length = 1557

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 47/375 (12%), Positives = 112/375 (29%), Gaps = 32/375 (8%)

Query: 2   LRRVLIGLGF------LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55
           +++VL  LG       L  V+L     +P   +W   +      A+   G  I V+   +
Sbjct: 1   MKKVLKWLGIAVLVPILLIVILTALLYLPPVQNWAVKK--VAAIASEKTGMDITVE---R 55

Query: 56  IHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN-- 113
           + +     +  +  R   +      + +  +      +PL S  + + ++ +    LN  
Sbjct: 56  VCLEFPLDLGIEGFRALHQNQTDTIADVRKMVCDVRLIPLFSKRVVIDELSLTDAKLNTN 115

Query: 114 -----FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD-LNL 167
                  +       W            V +    +   ++ I   ++  V      +  
Sbjct: 116 GFIGDLRIKGNLQELWLSSNGIDLDQETVEVNGARLSEAQLDIALSDTAAVDTTESTMKW 175

Query: 168 QISARFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAI---SLKIQL 223
            ++A  ++I+    +  + G ++ A+        R       N   K  ++     ++  
Sbjct: 176 IVNADSVSILKSNFMVHLPGDTLNAQAYMGRAVAREVLADLGNKIYKVGSLDWNQGRLNY 235

Query: 224 FPLAYPIIIDLFGN-LFWNEKQPIYS-GVFSVAGDFSKLLNLE----LSAKKSRLSGNFK 277
                P +  L  N L   +         +        + +L        + + LS    
Sbjct: 236 DNRYEPEVSGLDYNHLALTDINLRIDSIEYVEPNTSLIIRDLRAKEKSGLQVNHLSARVT 295

Query: 278 ISDGNVRISRYKLQSILPNSSTDED---NKTKVSQDEENLLNFSENGAESMHDLNETDFF 334
           + D  + I + +LQ+   +  T+     N     Q     L  +    +        D  
Sbjct: 296 MDDKRLTIPQLRLQTPDTDIETELAMDFNTFDTQQPGAMKLRLNAQIGKQDVMRFAGDMP 355

Query: 335 EEEEKKNKNDDLKKD 349
           +   +   N  +   
Sbjct: 356 QAFVRNYPNHPISIK 370


>gi|320108700|ref|YP_004184290.1| AsmA family protein [Terriglobus saanensis SP1PR4]
 gi|319927221|gb|ADV84296.1| AsmA family protein [Terriglobus saanensis SP1PR4]
          Length = 554

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 21/216 (9%), Positives = 60/216 (27%), Gaps = 18/216 (8%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE--DGSFESKIEG 85
           +   F+       +  VG+ + +   + + +LP P    ++  + +          + + 
Sbjct: 38  NVNRFQRRIASSISRSVGRPVHLD-SVSMTLLPLPGFTLENFVVSEDPQFGSEPVMRADE 96

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-----------FQRKSTMDMI 134
           +        L  G++    + +  P +N   ++ G  N                      
Sbjct: 97  VKATLRVSSLWRGKLEFSTISLTAPSVNLVRNAAGRWNLETILLQASQIDAAPTQQKRAG 156

Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
                  I     R+ +   +    + L+     +          L + +       + +
Sbjct: 157 STPRFPYIEATDARVNVKLGDEKTPFSLTGAEFAL-WLPDPQEWRLRLKAKPARTDTDAS 215

Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
              D      + T    AK   + ++ +      P+
Sbjct: 216 ---DTGELRVEATLRRAAKMSDVPIQAEAVWRRTPL 248


>gi|170732064|ref|YP_001764011.1| hypothetical protein Bcenmc03_0711 [Burkholderia cenocepacia MC0-3]
 gi|169815306|gb|ACA89889.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3]
          Length = 1399

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/331 (11%), Positives = 100/331 (30%), Gaps = 37/331 (11%)

Query: 2   LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55
           LRRV      +      +       +   +     +FR   ER  +  +  ++++ G + 
Sbjct: 24  LRRVFRVTLAVGIGTYFIASGAFLGLRYVVLPRIDEFRPRIERAVSDKLHAQLSI-GKLS 82

Query: 56  IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            +     P V   ++ I  ++       +   +    ++ LL     +  + +DQP L  
Sbjct: 83  PNWSGMQPGVELTNLTIRGRDGKV-ALSVPHATAALSWMSLLRLSPALSSLIVDQPDLVV 141

Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLN 166
             ++ G  +            +       +  E I ++GG ++  D + +     LS + 
Sbjct: 142 ARAADGSLSVAGVGVATTHGGNDTFGTWLLKQEAIVLRGGTLRWRDAQHAAPELVLSGIR 201

Query: 167 LQISAR----FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT--------ANFPAKN 214
           + +          + +P +   + G +               K          +  P   
Sbjct: 202 IAVLNDGRVHKAALQAPANGTLLLGPLDFRARFKHKPLAPIGKPANWTGDAYLSTGPVDL 261

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270
           + ++  + +    +   ID      + +     +G   + G    L        L     
Sbjct: 262 QTLTRYLDVPLTIHAGRIDNAIWATFGDGHLRSAGG-DLQGADVALRVRPTQPRLDVPTV 320

Query: 271 RLSGNFKISDG---NVRISRYKLQSILPNSS 298
               +  +  G    + ++R+  +   P   
Sbjct: 321 GFGWDMVLDAGHDYTLHLTRFNAELGQPPLP 351


>gi|116688764|ref|YP_834387.1| hypothetical protein Bcen2424_0741 [Burkholderia cenocepacia
           HI2424]
 gi|116646853|gb|ABK07494.1| conserved hypothetical protein [Burkholderia cenocepacia HI2424]
          Length = 1399

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/331 (11%), Positives = 100/331 (30%), Gaps = 37/331 (11%)

Query: 2   LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55
           LRRV      +      +       +   +     +FR   ER  +  +  ++++ G + 
Sbjct: 24  LRRVFRVTLAVGIGTYFIASGAFLGLRYVVLPRIDEFRPRIERAVSDKLHAQLSI-GKLS 82

Query: 56  IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            +     P V   ++ I  ++       +   +    ++ LL     +  + +DQP L  
Sbjct: 83  PNWSGMQPGVELTNLTIRGRDGKV-ALSVPHATAALSWMSLLRLSPALSSLIVDQPDLVV 141

Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLN 166
             ++ G  +            +       +  E + ++GG ++  D + +     LS + 
Sbjct: 142 ARAADGSLSVAGVGVATTHGGNDTFGTWLLKQEAVVLRGGTLRWRDAQHAAPELVLSGIR 201

Query: 167 LQISAR----FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT--------ANFPAKN 214
           + +          + +P +   + G +               K          +  P   
Sbjct: 202 IAVLNDGRVHKAALQAPANGTLLLGPLDFRARFKHKPLAPIGKPANWTGDAYLSTGPVDL 261

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270
           + ++  + +    +   ID      + +     +G   + G    L        L     
Sbjct: 262 QTLTRYLDVPLTIHAGRIDNAIWATFGDGHLRSAGG-DLQGADVALRVRPTQPRLDVPTV 320

Query: 271 RLSGNFKISDG---NVRISRYKLQSILPNSS 298
               +  +  G    + ++R+  +   P   
Sbjct: 321 GFGWDMVLDAGHDYTLHLTRFNAELGQPPLP 351


>gi|107021817|ref|YP_620144.1| hypothetical protein Bcen_0257 [Burkholderia cenocepacia AU 1054]
 gi|105892006|gb|ABF75171.1| conserved hypothetical protein [Burkholderia cenocepacia AU 1054]
          Length = 1399

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/331 (11%), Positives = 100/331 (30%), Gaps = 37/331 (11%)

Query: 2   LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55
           LRRV      +      +       +   +     +FR   ER  +  +  ++++ G + 
Sbjct: 24  LRRVFRVTLAVGIGTYFIASGAFLGLRYVVLPRIDEFRPRIERAVSDKLHAQLSI-GKLS 82

Query: 56  IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            +     P V   ++ I  ++       +   +    ++ LL     +  + +DQP L  
Sbjct: 83  PNWSGMQPGVELTNLTIRGRDGKV-ALSVPHATAALSWMSLLRLSPALSSLIVDQPDLVV 141

Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLN 166
             ++ G  +            +       +  E + ++GG ++  D + +     LS + 
Sbjct: 142 ARAADGSLSVAGVGVATTHGGNDTFGTWLLKQEAVVLRGGTLRWRDAQHAAPELVLSGIR 201

Query: 167 LQISAR----FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT--------ANFPAKN 214
           + +          + +P +   + G +               K          +  P   
Sbjct: 202 IAVLNDGRVHKAALQAPANGTLLLGPLDFRARFKHKPLAPIGKPANWTGDAYLSTGPVDL 261

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270
           + ++  + +    +   ID      + +     +G   + G    L        L     
Sbjct: 262 QTLTRYLDVPLTIHAGRIDNAIWATFGDGHLRSAGG-DLQGADVALRVRPTQPRLDVPTV 320

Query: 271 RLSGNFKISDG---NVRISRYKLQSILPNSS 298
               +  +  G    + ++R+  +   P   
Sbjct: 321 GFGWDMVLDAGHDYTLHLTRFNAELGQPPLP 351


>gi|254432544|ref|ZP_05046247.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
 gi|197626997|gb|EDY39556.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
          Length = 1386

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/278 (11%), Positives = 75/278 (26%), Gaps = 23/278 (8%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAE 91
            R   E+Q    +G  + +          +  +     R+          +   LS+  +
Sbjct: 20  VRPRLEQQIGKALGHPLQLG---DYRGFGWAGLRLGPTRVLPGRADGSSLRASRLSVSLD 76

Query: 92  FLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI 151
            +  L   + V  + +    ++   +++G    F           + L     +  R+ I
Sbjct: 77  PVSSLRRRLPVLQLTLAGLEVDLRRNAQGQYWVFGAGDPDVPPPRLDLRLRMQQPARVTI 136

Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSID---------SIKGSVIAEGTGNFDNKRS 202
                        +      +       +            +  G V     GN+  +R 
Sbjct: 137 RPAPEASRQLRLAVQAGAELQVHEEAIQVRGSLQPLDGRGVAGDGRVRLVAKGNWGQQR- 195

Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG--NLFWNEKQPIYSGVFSVAGD--FS 258
              + A   ++   + L  +L  L   +     G   L W + +P   G   +      +
Sbjct: 196 ---LQAEVLSQGFPLQLPARLLGLPGALQGSGDGRVRLGWRDGRPDCQGELRLRQVEWQA 252

Query: 259 KLLNLELSAKKSRLSGN---FKISDGNVRISRYKLQSI 293
              N  +  +  RL        +   + R      +  
Sbjct: 253 PGSNPPVGVQNPRLRCRGESLSLVPTDWRWGDLSGRVG 290


>gi|56460909|ref|YP_156190.1| outer membrane protein [Idiomarina loihiensis L2TR]
 gi|56179919|gb|AAV82641.1| Probable outer membrane protein [Idiomarina loihiensis L2TR]
          Length = 786

 Score = 79.9 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 54/401 (13%), Positives = 128/401 (31%), Gaps = 51/401 (12%)

Query: 3   RRVLIGLGFLFSV-VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           RR+   L  L  +  L+G F +P  I +          A    G+++ ++    +H  P+
Sbjct: 21  RRIRFWLLVLVILYTLLGFFALPWVIQY-----VAVNTAKEDFGRELRIE---SVHTNPY 72

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             ++    + ++ K+D         L +  E+  ++        + ID+  +       G
Sbjct: 73  TLTLRMNGVTLNDKDDRQ-LLGWGNLLVNLEWSSIIDQTWTFEAIRIDKLMIQEERFVSG 131

Query: 121 VSNWFQRKSTMDMI---------------HNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
            + + +  +                      + +    ++ G ++  D   D        
Sbjct: 132 ETRFSRLAAESSGPEAGKEKAEKEESAEMPALRIRDFKLENGILRFADNLKDVTAADDAE 191

Query: 166 NLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKIT---ANFPAKNKAIS 218
             Q+S    NI   +   +++      +   G       + AF  T      PA      
Sbjct: 192 PKQVSLALQNIGLSVKDFTLQNDASFPLRLNGQLT-KGGKLAFDGTFQLLPSPALEGNAE 250

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278
           +    F  A P  +  F N+         +G  S           + SA  + L+     
Sbjct: 251 INELAFKQAAPY-LQQFMNVQLENGTLTLNGQMSTNAQQP--FAFKGSASINTLNIKEAS 307

Query: 279 SDG------NVRISRYKLQSILP---NSSTDEDN-KTKVSQDEENLLNFSE----NGAES 324
           +D       +++  ++ L         +         +V  +++   NF +      A++
Sbjct: 308 NDETLLGWDSLQTGQFDLNIASKEIETAPIVVKGLSARVVINQDKTTNFGQLVVDTPADT 367

Query: 325 MHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSH 365
             D N+++  +      +  +L   D+Q++        ++ 
Sbjct: 368 KGDTNKSEETQPFGITIEGVELSDGDVQFADKSLPLPFSTS 408


>gi|37520152|ref|NP_923529.1| hypothetical protein gll0583 [Gloeobacter violaceus PCC 7421]
 gi|35211145|dbj|BAC88524.1| gll0583 [Gloeobacter violaceus PCC 7421]
          Length = 835

 Score = 79.9 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/354 (11%), Positives = 100/354 (28%), Gaps = 32/354 (9%)

Query: 4   RVLIGLGFLFSVVLVG---AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
            +   LG L  V L+       +P F++   F    +++ +    ++ A+   +++  L 
Sbjct: 27  WLWRALGALAVVGLIAGGVLLVLPFFVEDKSFDALVQKELSTWTRRE-AILSRVRLRTLG 85

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              V   ++++   +      K     +  +F  L+  +++V  + +D+  ++   +  G
Sbjct: 86  GFGVVVDNLQLLGSDGNVD-LKARQAFIELDFFALILQDLKVRLVELDEARIDLKRNRDG 144

Query: 121 VSNWFQRKSTMDMIHNVILE----KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
             NW   +        +  +     + + G  + I D +           L +    L+ 
Sbjct: 145 RWNWADLQPPDRPSGTLKADLTRTGLRLIGASVAITDAQPRPAQQFLIAPLSLKLDDLDE 204

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI---QLFPLAYPIIID 233
            + L       +          +         +    +    LKI   +  P        
Sbjct: 205 RTLLVSVQGAAADYRSKRIADLSADGRLLRPVDGDWFSSQGELKILCRKFRPRLLRDYTR 264

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL------------------SAKKSRLSGN 275
               L        + G +    D    L  +L                    +     G 
Sbjct: 265 QIAGLSGLAGVYDFDGDWRRDSDNRVSLKGKLFSRLLHWRWPEVLGKKIWQVRNLGFEGA 324

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
             ++   V + R ++ +   +       K     + +           +  D  
Sbjct: 325 VSLTGSTVAVERLRVSTEGID--VQLAGKVVTPGNPKGKAAVDLKLNSAYFDPF 376


>gi|323524811|ref|YP_004226964.1| hypothetical protein BC1001_0442 [Burkholderia sp. CCGE1001]
 gi|323381813|gb|ADX53904.1| hypothetical protein BC1001_0442 [Burkholderia sp. CCGE1001]
          Length = 1407

 Score = 79.9 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 47/326 (14%), Positives = 101/326 (30%), Gaps = 34/326 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPL------FIDWTDFREDFERQATLIVGKKIAVKGGIK 55
           LRR L  +  L  V+   A  + L            FR   E   +  +  +  + G + 
Sbjct: 27  LRRTLHVVLALALVLYFIAAGLFLGLRYGVLPRVDSFRPHIEATVSDKLHAQFTI-GKLA 85

Query: 56  IHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            H     P +   ++ I   +       I   +    +  L      +  + +DQP +  
Sbjct: 86  PHWTGFQPGLDITNLVIRDHDG-KPALTIPHATATLSWRSLWQFRPVLSSLIVDQPDVLI 144

Query: 115 YLSSKGVSNWFQRK-------STMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166
                GV +            + +     V  E I V+GG ++  D + D     L D+ 
Sbjct: 145 ARGGDGVLSVAGVPVPTRHSGNDILSTWLVRQEAIVVRGGVLRWRDAQRDAPELALHDIR 204

Query: 167 LQISARFLNI----ISPLSIDSIKGSVIAEGTGN-----FDNKRSAFKITA---NFPAKN 214
           + I     +      +P     + G +               K   +K  A     P   
Sbjct: 205 IAILNEGYDHRLALQAPPDGQLLHGPLDFRTHFRHTPLSAIGKPVNWKGQAYVSTGPVDL 264

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQ-PIYSGVFSVAGDFSKLLNLELSAKKSRLS 273
             ++  I+     +   ID    + + + +    SG  + A    ++   +        +
Sbjct: 265 PTLARYIKFPIETFAGRIDNAIWVDFADGRMSSASGQMAGADVALRVRPTQPKLLLPVAN 324

Query: 274 GNFKIS----DGNVRISRYKLQSILP 295
             +++     D  ++++  + +   P
Sbjct: 325 FGWRLQAQQGDYTLQLNDLRAELGQP 350


>gi|109896519|ref|YP_659774.1| hypothetical protein Patl_0188 [Pseudoalteromonas atlantica T6c]
 gi|109698800|gb|ABG38720.1| conserved hypothetical protein [Pseudoalteromonas atlantica T6c]
          Length = 1301

 Score = 79.5 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 49/382 (12%), Positives = 121/382 (31%), Gaps = 22/382 (5%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI- 58
           +++++      L  +V V    V   + +    +   E+      G +I + G I     
Sbjct: 11  IIKKLWTCAAILLVLVAVAISVVRYTLPYMDGQKHRLEQWVEGRYGVEINI-GTITAQWK 69

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL- 116
              P++  +D+++ Q         I+   +  +F   +L  +IR     ++  ++   + 
Sbjct: 70  GAGPAIVLEDLQLVQNAQSPLSLDIKKTIIELDFWGSILGRQIRSQRFDLNGLNVKVDVT 129

Query: 117 --SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL---NLQISA 171
             + +G             +    L+   V   + +I      QV  ++ L   N  +  
Sbjct: 130 LMNKEGSDFPVVSALKQLFLEQ--LQSFSVSDSQFEISTAHDQQVVLVNQLLWSNSGLHH 187

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
           + +  +    + S   S   +  G+ D+    F   A+    +  I+  +          
Sbjct: 188 QGVGELQVEELASNSASFTLDLRGDKDSLNGTFYARAHEVDLSPWINQWLATRYDLVESR 247

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN----VRISR 287
            +        +     +    +A       N +     + L G       N      +  
Sbjct: 248 GNFVVWASIQDGDIK-NAQLDLADSRFVWQNEDAEITAAILGGQLNAEPSNDGWVFNLYD 306

Query: 288 YKLQSILPNSSTDEDN----KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343
             LQ+     +++       + +V     + ++ S         LN  D F   +  + N
Sbjct: 307 LALQANERTQTSNWYGEINHQGQVHIQNADRVDLSAITPLLPLVLNPVD-FNLLKDLSPN 365

Query: 344 DDLKKDDIQYSVNKKEEKDNSH 365
             L K ++++  +    + N  
Sbjct: 366 ATLNKFNVKFDKSDTYAQVNLS 387


>gi|218531094|ref|YP_002421910.1| AsmA family protein [Methylobacterium chloromethanicum CM4]
 gi|218523397|gb|ACK83982.1| AsmA family protein [Methylobacterium chloromethanicum CM4]
          Length = 632

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 101/334 (30%), Gaps = 12/334 (3%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LRR L  L        + A  +P  I+         R      G  +A +G  ++ +LP 
Sbjct: 3   LRRTLSALALGLVAAGLVAACLPWSIEAPGTTRFVSRGLQQGWGVALAARGRTEVVLLPL 62

Query: 62  PSVFFKDIRIDQKEDGSFESKI-EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS-K 119
           P + F+DIR+ + +           LS++     LL+G + V  + +D   L     +  
Sbjct: 63  PRIVFEDIRLTEGDAAGPVLAAGGNLSLQLGLAALLTGRVEVDSLTLDGSELVLPQEAGD 122

Query: 120 GVSNWFQR--KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
              +        ++         +I +    +K  D     +    D++L IS    +  
Sbjct: 123 PRWSAAAERLTHSIAGADGDRPRRIILARCALKGRDPRDGTLQTARDVDLTISWPAWSES 182

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
             ++         A  T       + F    +                    +   L  +
Sbjct: 183 LAVNGGFRWSDGSARITLTDLRPYALFSGGESPFTAALTWPTGSLNAQGNGSLRDGLKAS 242

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297
              + +        ++ G     L L    +   + G+F+ + G ++     ++S     
Sbjct: 243 GTGSLQTRSLHKTLALTG---GGLALSPFVEDFAVGGSFEAAAGQIQFPNVTVRS----D 295

Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331
               +     +   +         A    +L+  
Sbjct: 296 GNVLEGAGSATFGPKRN-AVQATLAAENLNLSPL 328


>gi|82702186|ref|YP_411752.1| hypothetical protein Nmul_A1057 [Nitrosospira multiformis ATCC
           25196]
 gi|82410251|gb|ABB74360.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
           25196]
          Length = 1264

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 48/359 (13%), Positives = 113/359 (31%), Gaps = 22/359 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFP 62
            VLI +  +FSV+L+      L  +   +RE+     +   G+ + + G I  +     P
Sbjct: 2   WVLIAVAAVFSVLLLSLRYWLL-PNIEQYRENLASAISHASGQYVTL-GEISANWDGFRP 59

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            +  +D+R+   +  +    +  L     +  +L GE+   ++ IDQP L     + GV 
Sbjct: 60  HMMLRDVRVHDNQGVT--LLLNRLEGTLSWRSILHGELLFREIAIDQPDLIVRRDTAGVI 117

Query: 123 NWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
           +                     +   ++ +    I   D +         +NL++  R  
Sbjct: 118 HVAGFALKQEFTESEDGFFDWLLNQRQVIINNANILWQDDQRTAPQLELLVNLRLENRGR 177

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
           +    +               +         +      + +      +     +   +  
Sbjct: 178 HHRFGIRA---IPPTRLAAHLDMRGDFKGESLANPGLWRGRLFMQITRADIAGWQAWLPF 234

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSK--LLNLELSAKKSRLSGNF---KISDGNVRISRYK 289
              +  N          ++ G        ++ L   K+RL        ++    R+  +K
Sbjct: 235 PEEIKLNRGVGALRIWANIDGTDMNKVTADMRLQNVKARLESTLPEVSLTRLAGRVGWHK 294

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLL-NFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347
           ++    N S     +   +   +  L     +  +  HD ++ D      +  + D L+
Sbjct: 295 VEDNGSNGSQFFARRLDAAFYGKPPLPLLDFSFQQLHHDASQPDSNTLSVQNLRLDKLE 353


>gi|134094099|ref|YP_001099174.1| hypothetical protein HEAR0860 [Herminiimonas arsenicoxydans]
 gi|133738002|emb|CAL61047.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 1403

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 48/379 (12%), Positives = 118/379 (31%), Gaps = 29/379 (7%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKD 68
            +     L       +    + +R D E+ AT  +G+ ++++  I        P +   +
Sbjct: 49  AYFIFCALFLTLRYAVLPQISAYRVDVEKVATKAIGRPVSIE-TIAASWDGLRPHLALGN 107

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS------ 122
           + +  K+      ++  +S    +L +L  ++R+  + ID+P ++    + G        
Sbjct: 108 VVVYDKDG-DKALQLPAVSATVSWLSVLIADLRLHSLEIDKPDMDIQRDANGNFYVAGLL 166

Query: 123 -NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNIISPL 180
            +  +          +   +I ++ GR++  DQ        L ++N+ +     +    L
Sbjct: 167 VDLQKSGDGKAADWILSQREITIRDGRLRWQDQLRQAPELLLGNVNMVLRNNGRHHKFAL 226

Query: 181 S-IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
                   +   +    FD+   A KI+       +  +        A+   +D   +L 
Sbjct: 227 QATPPAAIAAPLDVRAAFDHPLFAQKISDATRWTGELYTDLRDTNLAAWKTYLDFPFDLQ 286

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
                      F  A       +       S +S   +     + ++R   +  +  S  
Sbjct: 287 QASGSMRAWLAFDHARV----ADFTADLSLSNVSAQLRKDMPLLSLARANGRISVRES-- 340

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV---N 356
             +   +   D         +         +     ++        + +  I        
Sbjct: 341 -LEGNAR---DGVPTFGMRGHTISVR----DFSLQTDDGLVLPKTTMSEHYIAAQNGKPE 392

Query: 357 KKEEKDNSHDKENQENFSG 375
             E +  S D +   NF+G
Sbjct: 393 SIEIQAASLDLQAWANFAG 411


>gi|187251264|ref|YP_001875746.1| hypothetical protein Emin_0854 [Elusimicrobium minutum Pei191]
 gi|186971424|gb|ACC98409.1| Uncharacterized protein involved in outer membrane biogenesis
           [Elusimicrobium minutum Pei191]
          Length = 715

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 47/363 (12%), Positives = 108/363 (29%), Gaps = 53/363 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFT----VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++++L     LF + ++        +         +      A     ++++    +   
Sbjct: 1   MKKLLKIAAVLFLIAVIAVAGAAIALRQIFTPEKIKNIITTYAKTNYNREVSFD-KLSFK 59

Query: 58  ILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +     V   +  + +         +K + + ++    PL    I V  + +D  + N  
Sbjct: 60  L---IGVELSNFAMSEAGTFKNGTFAKADSMVIKIALRPLFKKSIEVSTIGLDGFNSNII 116

Query: 116 LSSKGVSNWFQRKSTMDMIH-----------------NVILEKIHVKGGRIKIIDQESDQ 158
              KG  N+       D+                   NV ++K  +    I   D++   
Sbjct: 117 KDEKGNFNFDDLIPAADVASSAQPKTPKEIEEQGLSFNVQVDKFFILNSAINYTDKKEKM 176

Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI- 217
              + D+N++I+   L+        ++                    +      KN  + 
Sbjct: 177 TAQIKDVNVKINDFVLDGPF-----AVNSDFRLLYNAQDMAVDMPVSVNLMADLKNNNLD 231

Query: 218 -------SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS------VAGDFSKLLNLE 264
                  SL   L  +       + G   +N      SG  +      ++   S L +  
Sbjct: 232 AAELTLKSLTASLNGITTNFQGTVKG---FNNPIISVSGTVNNVNNKTLSSFVSDLPDFS 288

Query: 265 LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
           L A K        +   N  IS+Y        + +  +    VS   ++L+  ++   + 
Sbjct: 289 LPAVKLASDIKLNLDKSNAEISKYS----ASLTKSTVNGSANVSFGGKDLVYNAKANLKL 344

Query: 325 MHD 327
             D
Sbjct: 345 FVD 347


>gi|295675585|ref|YP_003604109.1| hypothetical protein BC1002_0497 [Burkholderia sp. CCGE1002]
 gi|295435428|gb|ADG14598.1| conserved hypothetical protein [Burkholderia sp. CCGE1002]
          Length = 1420

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 80/246 (32%), Gaps = 19/246 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTV------PLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55
           LRR L  L  L  V+   A  V       +      FR   E   +  +  +  + G + 
Sbjct: 27  LRRTLRVLATLALVLYFIAGGVFLGLRYVVLPRIDTFRPRIEAAVSDKLRTQFTI-GRLA 85

Query: 56  IHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            H   F P +   ++ I   +       I   +    +  L      +  + +DQP +  
Sbjct: 86  PHWSGFQPGLDVTNLVIRDHDG-QPALTIPHATATVSWRSLWEFHPALSSLIVDQPDVLV 144

Query: 115 YLSSKGVSNWFQRK-------STMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLN 166
             S  GV +            +       +  + I V+GG ++  D    +    L D+ 
Sbjct: 145 SRSDDGVLSVAGVPVPTRHSGNDALSTWLLRQQAIVVRGGVLRWRDATRHEPELALRDIR 204

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
           + I     +    +++ +     + +G  +F        ++A     N    + +   P+
Sbjct: 205 IAILNDGHDHR--MALQAPPDGQVLKGPLDFRTHFRHAPLSAIGKPINWTGQVYMSTGPV 262

Query: 227 AYPIII 232
             P + 
Sbjct: 263 DLPTLA 268


>gi|262166070|ref|ZP_06033807.1| AsmA protein [Vibrio mimicus VM223]
 gi|262025786|gb|EEY44454.1| AsmA protein [Vibrio mimicus VM223]
          Length = 618

 Score = 79.5 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 43/334 (12%), Positives = 94/334 (28%), Gaps = 57/334 (17%)

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMD------------- 132
           + +    +PLL  ++++ ++++D    +      G SN                      
Sbjct: 1   MGIDVPVMPLLDKQLKIGNIHLDGAEFHLETLKDGRSNLDALTQAQSKQAAAPAATESTP 60

Query: 133 ----------MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL----QISARFLNIIS 178
                        ++ L  + V    ++I+D ++     L D+ L     +   +     
Sbjct: 61  TPETTSSEPTAAWSIELGGVSVSNAVLEIVDHKAGTQTKLYDVQLSVSEFMPDSWTKATF 120

Query: 179 PLSIDSIKGSVIAEGTGNF-----------------------DNKRSAFKITANFPAKNK 215
               +  +    A+G                            N+  + K+  +    +K
Sbjct: 121 AAKGNKDQQKFAAQGDAEVRLSADFKQYALRNINLDASFSDPSNQIDSAKLKLDTFEFDK 180

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS--VAGDFSKLLNLELSAKKSRLS 273
           A +L   L   A  + ++  G+      + I              +   L  S  K  L 
Sbjct: 181 ANALTFSLAGKAADMKLNAKGSASLMVDKAISKVGLDGLKLEADLEGAALPQSPMKIGLD 240

Query: 274 GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL---NE 330
                      ++   L  +  N+    D K  V+  +   + F+ +  E   D    N+
Sbjct: 241 SQISFDLTKSHLNVL-LNKLTANA-LSFDGKADVTLADIPKVRFNVHSPEIDLDAFLGNK 298

Query: 331 TDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364
           T   E     +         +      + E D S
Sbjct: 299 TAATEPTPANDSAAASSSAPVASGAPAEVEPDLS 332


>gi|91217477|ref|ZP_01254436.1| outer membrane assembly protein [Psychroflexus torquis ATCC 700755]
 gi|91184362|gb|EAS70746.1| outer membrane assembly protein [Psychroflexus torquis ATCC 700755]
          Length = 874

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 135/397 (34%), Gaps = 37/397 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI 58
           +++    +G +  ++++G F  P+      F+   E+         +  +     + + +
Sbjct: 1   MKKAFKIIGIVILILIIGLFLTPIL-----FKGSIEKMLKNAANDNVNAQVEWSSLNLSL 55

Query: 59  ---LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112
               P  SV  +D+ +  K    G      +  ++    + L   E + + ++Y+++ ++
Sbjct: 56  FRNFPNASVSLEDLSLVNKAPFEGDTLVYAKNFNISMGIMQLFKDEGLSIDEIYLNEAYM 115

Query: 113 NFYLSSKGVSNW-----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           N  + S G +N+              K       N+ L    +   RI  +D+  +    
Sbjct: 116 NVKVDSLGNANYDIAKSTDVKQEATTKGKESKPFNLNLSHYEINSSRINYLDESGNIFLR 175

Query: 162 LSDLNLQISARFLNIISPLSIDS-IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
           L++ +      F   +  L   +  K S   +GT   +          N   +N   S  
Sbjct: 176 LTEFSHSGDGNFEASVFTLKTQTESKVSFDFDGTNYLNANSLVLDADLNIDLENMKFSF- 234

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKIS 279
           ++   +   + +   G +   +        FS  + DF   L L   A  S L G     
Sbjct: 235 LENEAIVNQLPLKFEGYVQTFDDYNDIDIKFSTPSSDFKNFLALIPEAYASNLDGVTTTG 294

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE--NLLNFSENGAESMHDL---NETDFF 334
           D  +      +     + +         S D       +  +   +   D+   NET   
Sbjct: 295 DFQLNG----IIKGKVDDTYIPTLDISASSDNASFQYPDLPKKVEDISLDIRIQNETGLV 350

Query: 335 EEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371
           E+   K KN D + D  +++ +   +   ++   N +
Sbjct: 351 EDTYIKFKNVDFRIDQDRFAGSGSVKNLTTNMLVNLK 387


>gi|58039387|ref|YP_191351.1| hypothetical protein GOX0923 [Gluconobacter oxydans 621H]
 gi|58001801|gb|AAW60695.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H]
          Length = 656

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 47/348 (13%), Positives = 101/348 (29%), Gaps = 24/348 (6%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +LR  L+ +  L  ++L       ++ID  D       +    + + + + G + IH   
Sbjct: 17  LLRWFLVSILSLTVLLLALFGAGWIWIDHKDLAAFATAKLERKLDRPVHI-GALHIHPGT 75

Query: 61  FPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
           + ++   D+ +     G       +  L  +     L+ G     ++ I +    F  + 
Sbjct: 76  WLTIEADDVSVANIASGTRPQMMTLGHLGAQVRLTSLIWGPPETRNIVISKFSGLFERTP 135

Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII- 177
             + NW       D    +  E+         +      +   + D ++   +       
Sbjct: 136 AHLPNWRFGPHQNDPRPPLTPEQQAKADAPPDLHSAPGLRNVTILDSDVTYRSANGASYK 195

Query: 178 -----SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI---SLKIQLFPLAYP 229
                  L+  S    +    +G ++    A           +         +    +  
Sbjct: 196 ATLGKVELASTSDTSPLTMTLSGAYNGTPIAISAEMEPIRDLRKTPQRPYGTKAHVTSGD 255

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK------KSRLSGNFKISDGNV 283
           +  D  G L          G  +V    S  L      K      K  LSG+F  S  + 
Sbjct: 256 MTSDFTGTLTDPTNFDGVEGHTTVTTPTSDTLFNVAGIKGDHAPVKLTLSGDFSHSGNDW 315

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQD--EENLLNFSENGAESMHDLN 329
              +         +ST ED    + +    +   + +        D+N
Sbjct: 316 HFRKAN---GTIQTSTMEDGDFTLVEGSHGKPD-DVTAKIGFGRLDIN 359


>gi|313203416|ref|YP_004042073.1| outer membrane assembly protein [Paludibacter propionicigenes WB4]
 gi|312442732|gb|ADQ79088.1| outer membrane assembly protein [Paludibacter propionicigenes WB4]
          Length = 890

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 81/282 (28%), Gaps = 22/282 (7%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------I 56
           ++ L   G    V  +    +P       F+    + A   +  K+             I
Sbjct: 6   KKGLKIGGSTVVVFFLILLILPF-----AFKGKITKLAKEQINGKLNATVDFDKINLSFI 60

Query: 57  HILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLN 113
              PF +V  +++RI    +         E + +      L S +   +  + I+   + 
Sbjct: 61  RHFPFATVSIENLRIVGINEFKKDTLLSSESVDLVLNLSSLFSDKGYEIRKLQINNSRIL 120

Query: 114 FYLSSKGVSNWFQRKSTMDM-------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
            ++   G  NW   K+             N+ L+   +K   I   D+   Q   + +LN
Sbjct: 121 AHVLPNGKDNWTVTKTDSTQKNDTTPMSFNLKLKDFEIKKAYIVYWDELGKQKAVIHNLN 180

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
              S  F    S L   +   S+     G     ++  ++ A   A       K      
Sbjct: 181 HHTSGDFTADSSMLKTKTTIDSLDYWMGGVKYLSKADVELNATIDANLNKKIYKFSENSS 240

Query: 227 A-YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA 267
               I     G +   +                K +   + A
Sbjct: 241 RINAIPFSFAGWVKMLDDGYDMDLTLDAKKVDFKAILSMIPA 282


>gi|297538928|ref|YP_003674697.1| hypothetical protein M301_1742 [Methylotenera sp. 301]
 gi|297258275|gb|ADI30120.1| conserved hypothetical protein [Methylotenera sp. 301]
          Length = 444

 Score = 79.2 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 59/375 (15%), Positives = 129/375 (34%), Gaps = 43/375 (11%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
             L        ++L  A  +P FI + D+  D E+  +  + + +++K  I+   LP P 
Sbjct: 2   TWLKCTLIAIGLLLGMALILPYFIAFNDYIPDIEKAISTELKEPVSIK-NIRFSPLPRPH 60

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY----LSSK 119
           +    I +   ED     K+  + +  +   LL   I +  + I+ P ++      +   
Sbjct: 61  LTVDGISVGTNED----IKLNKVVLIPDIFSLLQSPIVIKSIEINSPIISQQAFSKVLEL 116

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
             +N             V +E IH     IK            S ++L    + +     
Sbjct: 117 SKTNADPASQKSSP---VRVENIHFINALIKFGKVNFGPFD--SRIDLNNDGKLVEASIK 171

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
            S +++  S+  + +    +  +                 K  + P+  P+++D    L 
Sbjct: 172 TSDEALSISIKPDQSSYLIDVYA-----------------KQWILPIEPPLLLD---ELN 211

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP--NS 297
                       S         +   S   S     +K+ +GN+ I++ ++Q I    +S
Sbjct: 212 IKGVATSNDVKLSKINAKLYDGSASGSISLSWFK-EYKL-NGNLDINQVEMQKIASMLSS 269

Query: 298 STDEDNKTKVSQDEENLLNFSEN-GAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356
            T    K +     + + + S N   + ++ L+    F+ +       D++K       +
Sbjct: 270 KTHFSGKLEA----KPIFSASANTADQLINSLHLVTPFKVQSGVLYGVDIQKAATSIIKS 325

Query: 357 KKEEKDNSHDKENQE 371
                +   DK + +
Sbjct: 326 GSTGGETRFDKLSGQ 340


>gi|83952642|ref|ZP_00961372.1| hypothetical protein ISM_10830 [Roseovarius nubinhibens ISM]
 gi|83835777|gb|EAP75076.1| hypothetical protein ISM_10830 [Roseovarius nubinhibens ISM]
          Length = 1114

 Score = 79.2 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/362 (10%), Positives = 90/362 (24%), Gaps = 32/362 (8%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFID-----WTDFREDFERQATLIVGKKIAVK-GGIKIHI- 58
           L  +  +  ++L  A  +   +          R     +     G  + +  G   + + 
Sbjct: 26  LWSMISVAVLMLAAAGVMLSLMGTPVTVPDWLRVKVVERLNRDAG-PVRIDLGRAVVMVE 84

Query: 59  -LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
               P +   D+R   ++ G+  + +  +S      PLL GE+R   + +   HL+    
Sbjct: 85  EGWTPRLRLHDVRFSHRDSGAPIAAVSRVSGVLAMEPLLRGELRPKRVRLGGAHLSLRRD 144

Query: 118 SKGVSNWFQR--------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
             G  +                     +       L  +      ++  D  + + + + 
Sbjct: 145 EDGAIDLALGGARAVAIAEVVASIDMALQTPALSQLTDVSADNVTLRYEDARAGRAWNVD 204

Query: 164 D--LNLQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKI---TANFPAKNK 215
              + L      L +    S+        ++    +       +   I            
Sbjct: 205 GGRIGLSREGDALRLRGDFSLLGARDYATNLELGFSSRIGESAAQLSILVEDMPADEIAG 264

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
                  L  L  PI   L   +              +     K  +       S     
Sbjct: 265 QSPALAWLGALEAPISGALRVAVDKVGGLGPLDASLHIGQGVLKPNDAVKPVGFSSARAY 324

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE-NLLNFSENGAESMHDLNETDFF 334
           F  +  +  I   +L           + +  +   E                 +N   ++
Sbjct: 325 FTYTPQSQTIRFTELSLDSKWGRLRAEGQALLVGAESGWPTELQSQIRLRDIVVNPAGYY 384

Query: 335 EE 336
            E
Sbjct: 385 PE 386


>gi|308270298|emb|CBX26910.1| hypothetical protein N47_A09390 [uncultured Desulfobacterium sp.]
          Length = 1143

 Score = 79.2 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/342 (14%), Positives = 115/342 (33%), Gaps = 27/342 (7%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67
             G L  + LV +  +P  I     +     Q +L +G KI ++  + I + P      K
Sbjct: 8   WTGILLIIALVISLLLPHIISPEYLKAKIVEQVSLRIGYKIKLQ-YVDIMMFPRLHADIK 66

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL-----SSKGVS 122
           ++ +    + S  +KI  +    E  PL +G + ++ +Y+D P +   +        G+ 
Sbjct: 67  NVTLSAPGNFS--AKINNIKAYPEIWPLFTGNVNIYKLYLDDPAIKMDIPERLSGENGLF 124

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
            +   +    ++ +   +   ++   I I+   +  V   +   L  + R +     L+ 
Sbjct: 125 KYDSIQKADKLLQDF-FKSRTLEKTDI-IVQIRNGNVALYAGNRLYFNFRDIFSRVKLNP 182

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID---LFGNLF 239
             IK ++ A+     +       I + + +       +I+LF L   ++ +       L 
Sbjct: 183 KQIKIALDAKSNICDN-----ISINSQYFSYKSEGKGEIRLFNLNPKLLFNYLYPDSALK 237

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-----GNFKISDGNVRISRYKLQSIL 294
            ++ +       S  G  +  L          L       N K    +  I+ ++ +   
Sbjct: 238 VDDSKIGIKVNLSKKGPSNFDLKFYGQIPLLLLKRDNEILNLKSRQFSGNINSFRDRIAF 297

Query: 295 PNSSTDEDNKTKVSQD----EENLLNFSENGAESMHDLNETD 332
                  DN   +                +      D+ +T 
Sbjct: 298 NVEKLVIDNTESIYSAKYVVNPPDSPVQLDLEGKNIDIKKTG 339


>gi|325525551|gb|EGD03344.1| hypothetical protein B1M_16940 [Burkholderia sp. TJI49]
          Length = 315

 Score = 79.2 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 90/289 (31%), Gaps = 21/289 (7%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI 58
           M +  L      + V       +   +     +FR   ER  +  +  ++++ G +  H 
Sbjct: 1   MFKVTLAVGIGTYFVASGAFLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GKLSPHW 59

Query: 59  LP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
               P V   ++ I   +       +   +    ++ LL     +  + +DQP L    +
Sbjct: 60  SGMQPGVELTNLTIRGHDGRI-ALSVPHATAALSWMSLLRLSPALSSLIVDQPDLVVARA 118

Query: 118 SKGVSNWFQRK-------STMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQI 169
           + G  +            +       +  E I ++GG ++  D + D     LS + L +
Sbjct: 119 ADGSLSVAGVDVATTHGGNATFSTWLLKQEAIVLRGGTLRWRDAQHDAPELALSGIRLAV 178

Query: 170 SAR----FLNIISPLSIDSIKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAISLKIQ 222
                     + +P +   + G +                    T +       + L+  
Sbjct: 179 LNSGRVHKAALQAPANGTLLLGPLDFRARFTHKALAPVGKPSNWTGDAYLSTGPVDLQTL 238

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR 271
              L  P+ I   G +          G    AG   +  ++ L  + ++
Sbjct: 239 ARYLDMPLTIHA-GRIDNAIWATFRDGRLRSAGGDLQGADVALRVRPTQ 286


>gi|296161777|ref|ZP_06844579.1| conserved hypothetical protein [Burkholderia sp. Ch1-1]
 gi|295887941|gb|EFG67757.1| conserved hypothetical protein [Burkholderia sp. Ch1-1]
          Length = 1428

 Score = 79.2 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/325 (12%), Positives = 96/325 (29%), Gaps = 32/325 (9%)

Query: 2   LRRVL-IGLGFLFSVVLVG---AFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55
           LRR   + L     +  V       +   +      FR   E   +  +  + ++     
Sbjct: 59  LRRTFHVVLAIALVLYFVATGLFLALRYVVLPRADSFRPRIEAIVSEKLHAQFSIGKLAP 118

Query: 56  IHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
                 P +   ++ I  ++       I   +    +  L      +  + +DQP +   
Sbjct: 119 YWSGFQPGLDVTNLVIRDRDG-KTALTIPHATATLSWKSLWQFHPALSSLIVDQPDVLVA 177

Query: 116 LSSKGVSNWFQRKSTM-------DMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLNL 167
            SS GV +                    +  + I V+GG ++  D + +     L D+ +
Sbjct: 178 RSSDGVLSVAGVPVPTRHSGNDVLTTWLLRQQAIVVRGGVLRWRDAQHAAPELALRDIRI 237

Query: 168 QISARFLNIISPLSIDS----IKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAISLK 220
            I     +    L   +    + G +                    T         + L 
Sbjct: 238 AILNDGYDHRLALQAPAEGHVLNGPLDFRTHFRHAPLSAIGKPINWTGQVYVSTGPVDLP 297

Query: 221 IQLFPLAYPI-----IIDLFGNLFWNEKQ-PIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274
                + +PI      ID    + + E +    SG  + A    ++   +        + 
Sbjct: 298 TLARYVNFPIETFAGRIDNAIWIDFAEGRMKSASGQLAGADVAMRVRPTQPKLLVPVANF 357

Query: 275 NFKIS----DGNVRISRYKLQSILP 295
            +++     D  +++S++  +   P
Sbjct: 358 MWRLEAEEGDYKLQLSQFHAELGQP 382


>gi|110638232|ref|YP_678441.1| outer membrane assembly protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110280913|gb|ABG59099.1| outer membrane assembly protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 1031

 Score = 79.2 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/368 (9%), Positives = 114/368 (30%), Gaps = 30/368 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58
           + + VLI    L  +++     V L+    + + + E+     +   ++ +  I      
Sbjct: 7   IQKWVLITGCILAVLLISPFIIVQLY--KDEIKTEIEKNIDENINGIVSFE-KINYSFFF 63

Query: 59  -LPFPSVFFKDIRIDQ--KEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNF 114
             P  ++    + +           + I+ + ++  +   +L  +I +  + +++P ++ 
Sbjct: 64  HFPNLTLAMNKVDVIGIHTFQKDTLAHIDRIDLQLNWFKLILKNKIEIDAVVLNKPIIHM 123

Query: 115 YLSSKGVSNWFQRKSTMDMI-----HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
            +   G +N+   K             + L++  +K G I+ +++ + Q   + D+    
Sbjct: 124 LVKHDGSANYAIIKKDTINADTMEYAGISLDRFEIKEGTIRYLNESTRQWIEVYDIAHTG 183

Query: 170 SARFLNIISPLSIDSIKGSVIAEGT--GNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
                         +    +           +K+ +  +   F   +    ++ +     
Sbjct: 184 KIDIEKNKINYLTTTAVKHISVTDNDINYMHDKQLSLHMNLVFDLHSNTCFIQ-ENAIEL 242

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
                 + G++ +  K       F+        +   +        G +K    N+    
Sbjct: 243 NTFRFGMDGSVRFLPKGYHVDMTFASKQASFSDILSLIP-------GTYKKELKNIHTE- 294

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347
                 L   +         +       +     A+++  + +     ++ + N   +  
Sbjct: 295 -----GLLTCTGKIKGDYYDTSAVIPAFHVDLKIADAVLQVQDFPSKIKDIQCNLEIENT 349

Query: 348 KDDIQYSV 355
              I  ++
Sbjct: 350 SGIIDSTI 357


>gi|242281131|ref|YP_002993260.1| hypothetical protein Desal_3675 [Desulfovibrio salexigens DSM 2638]
 gi|242124025|gb|ACS81721.1| protein of unknown function DUF748 [Desulfovibrio salexigens DSM
           2638]
          Length = 1228

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/297 (10%), Positives = 93/297 (31%), Gaps = 30/297 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-P 62
           +V + +  L     +  F +  F      ++    +   ++ + + ++   ++ + P+  
Sbjct: 17  KVGLIVAGLLIFYTIIGFLLIPF----TIKKVALSKLPAVLNRDVRIE---QVDLNPYTL 69

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV- 121
            +      I +KE        +   +  +   L    + + ++ I  P ++  +   G  
Sbjct: 70  QLTVHGFEIGKKEGEGNLFSFKTFDLNLDSFSLFRLSLILDEIKIVDPQIDLAVFRGGSS 129

Query: 122 -----------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
                          +  +    +   I+  + V  G  ++ D+  D  + +S L+L + 
Sbjct: 130 VSDLIPEGDVEEQPEEANTDEKELFPFIVRDLVVSNGTCRVYDKVRDVRHEISSLDLFVP 189

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                  +   +   +  V        +    A K       ++        L       
Sbjct: 190 ------FTSSLLRDNEKQVQPSLDMIINGTPFALKGHTLPFNQSLKTQFDFSLKDAQLA- 242

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
             + +  L   E   + SG  S +         +    + ++SG   I++ ++   +
Sbjct: 243 --EYWPYLPIYETTELKSGSLS-SDLVLSFERGDTILPRVQISGKANITNFDLAARK 296



 Score = 42.6 bits (98), Expect = 0.095,   Method: Composition-based stats.
 Identities = 34/285 (11%), Positives = 85/285 (29%), Gaps = 40/285 (14%)

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG- 120
             V    + +  K  G     + G +M    + L    + +  + +++  +      KG 
Sbjct: 499 IRVNVDGLDLQPKGGGKTLIGLGGFAMNNGTVDLQEKSVFIDSIDLNKLLIRLMRDKKGI 558

Query: 121 ----------------------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQES-- 156
                                                 V L +  +    +++ D+ +  
Sbjct: 559 DLIKQIEQHQKNAKNVGVPVKQQEEGADSADAEGETWKVALNRFQLSESGVELTDRAATK 618

Query: 157 DQVYFLSDLNLQISARFLNIISPLSID-----SIKGSVIAEGTGNFDNKRSAFKITANFP 211
             V  +SD+ + ++        PL ++     + +GS+  +G     + +    +     
Sbjct: 619 KTVTSISDIKIGVNGLTFPEEKPLKLNLSALINKRGSIKIDGQAGPQSLKGKGSVQLRKL 678

Query: 212 -AKNKAISLKIQLFPLAYPIIIDLFGN---LFWNEKQPIYSGVFSVAGDFSKLLN----- 262
             ++    L  Q+        +D+ GN      NE    Y+G   +     +        
Sbjct: 679 RLRDFNGYLPPQMQMNIARGHVDVRGNWDFSAANEPVAGYTGKVQLKDLLIRDNQGNKQF 738

Query: 263 LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
             L     R   +F+ +   V++    + +   N   ++D    +
Sbjct: 739 FHLEDLAVR-EIDFRSAPLKVKVGSIAVLAPKANLEREQDGTFNI 782


>gi|91781875|ref|YP_557081.1| hypothetical protein Bxe_A3970 [Burkholderia xenovorans LB400]
 gi|91685829|gb|ABE29029.1| Putative membrane protein [Burkholderia xenovorans LB400]
          Length = 1430

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/325 (13%), Positives = 96/325 (29%), Gaps = 32/325 (9%)

Query: 2   LRRVL-IGLGFLFSVVLVG---AFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55
           LRR   + L     +  V       +   +      FR   E   +  +  + ++     
Sbjct: 59  LRRTFHVVLAIALVLYFVATGLFLALRYVVLPRADSFRPRIEAIVSEKLHAQFSIGKLAP 118

Query: 56  IHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
                 P +   ++ I  ++       I   +    +  L      +  + +DQP +   
Sbjct: 119 YWSGFQPGLDVTNLVIRDRDG-KTALTIPHATATLSWKSLWQFHPALSSLIVDQPDVLVA 177

Query: 116 LSSKGVSNWFQRKSTM-------DMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLNL 167
            SS GV +                    +  + I V+GG ++  D E +     L D+ +
Sbjct: 178 RSSDGVLSVAGVPVPTRHSGNDVLTTWLLRQQAIVVRGGVLRWRDAEHAAPELALRDIRI 237

Query: 168 QISARFLNIISPLSIDS----IKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAISLK 220
            I     +    L   +    + G +                    T         + L 
Sbjct: 238 AILNDGYDHRLALQAPAEGHVLNGPLDFRTHFRHAPLSAIGKPINWTGQVYVSTGPVDLP 297

Query: 221 IQLFPLAYPI-----IIDLFGNLFWNEKQ-PIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274
                + +PI      ID    + + + +    SG  + A    ++   +        S 
Sbjct: 298 TLARYVNFPIETFAGRIDNAIWIDFADGRMKSASGQLTGADVAMRVRPTQPKLLVPVASF 357

Query: 275 NFKIS----DGNVRISRYKLQSILP 295
            +++     D  +++S++  +   P
Sbjct: 358 MWRLEAEAGDYKLQLSQFHAELGQP 382


>gi|171321425|ref|ZP_02910374.1| conserved hypothetical protein [Burkholderia ambifaria MEX-5]
 gi|171093290|gb|EDT38489.1| conserved hypothetical protein [Burkholderia ambifaria MEX-5]
          Length = 1398

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/331 (12%), Positives = 97/331 (29%), Gaps = 37/331 (11%)

Query: 2   LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55
           LRRV      +      V       +   +     +FR   ER  +  +  ++++ G + 
Sbjct: 24  LRRVFRVTLAVGIGTYFVASASFLGLRYVLLPRIDEFRPRIERAVSDKLHAQLSI-GKLS 82

Query: 56  IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            H     P V   ++ I  ++       +   +    ++ LL     +  + +D P L  
Sbjct: 83  PHWSGMQPGVEVANLIIRGRDGRI-ALSVPHATAALSWMSLLRLSPALSSLIVDHPDLVV 141

Query: 115 YLSSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166
             ++ G  +            +       +  E I ++ G ++  D + D     LS + 
Sbjct: 142 ARAADGSLSVAGVGVATTHGGNDTFGTWLLKQEAIVLRNGTLRWRDAQHDAPELALSGIR 201

Query: 167 L----QISARFLNIISPLSIDSIKGSVIAEGTGN---FDNKRSAFKITANFPAKNKAISL 219
           L            + +P +   + G +                    T +       + L
Sbjct: 202 LAVLNHGRVHKAALQAPANGTLLLGPLDFRARFRHKPLQPIGKPTNWTGDAYLSTGPVDL 261

Query: 220 KIQLFPLAYPI-----IIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270
           +     L  P+      ID      + +     +G   + G    L        L     
Sbjct: 262 QTLGRYLDIPLTIHAGRIDNAIWATFEDGHLRSAGG-DLQGADVVLRVRPTQPRLDVPTV 320

Query: 271 RLSGNFKISDGN---VRISRYKLQSILPNSS 298
               +  ++ G    + ++R+  +   P   
Sbjct: 321 GFGWDMALNAGRDYTLHLTRFNAELGQPPLP 351


>gi|298372725|ref|ZP_06982715.1| hypothetical protein HMPREF0156_00771 [Bacteroidetes oral taxon 274
           str. F0058]
 gi|298275629|gb|EFI17180.1| hypothetical protein HMPREF0156_00771 [Bacteroidetes oral taxon 274
           str. F0058]
          Length = 1037

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/399 (12%), Positives = 120/399 (30%), Gaps = 37/399 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------ 55
           L+  LI +G L +V++V       F+   +            + K I  +  ++      
Sbjct: 5   LKITLISIGSLLAVLVVAILIAVWFVFTPERLTPI---VRNALQKNIKCQSDLREVELTF 61

Query: 56  IHILPFPSVFFKDIRIDQK---EDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPH 111
               P   V   D+ +             ++  L  +      L   E+ + ++ +    
Sbjct: 62  FSTFPNFGVKLSDVVLINPIKGSASDTLLRVNNLVGKVNLTKFLFDKELIINEIILQNGF 121

Query: 112 LNFYLSSKGVSNWFQRKSTMD---------MIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           +N Y  S G SN+    S                + +++I ++   +   D++S     +
Sbjct: 122 VNIYTDSTGTSNYDVFPSDTTKKDTTKFKMPFDFIDIKRIEIERLSVLYTDKQSGIDSKI 181

Query: 163 SDLNLQISA--RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            +LNL ++A     N  +   + +         T + D       +  +       I   
Sbjct: 182 KNLNLSLAATLNQENGNADFGLAADDVWFYMADTASLDVSMKKLSLDIDGSKNKDKIEGT 241

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN---LELSAKKSRLSGNFK 277
           ++    A  +       +   + Q        +   F  + N   +++S  K  + G   
Sbjct: 242 MKSGITALNVTKGTDKLMVNRDLQIELPLAVDIKKLFVDIKNGGFIDISNNKITIEGWIH 301

Query: 278 ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEE 337
             +  + +       I  ++      K      +   L  + +      D+N +   + +
Sbjct: 302 KLEKLIDMD------IKFDTDWLNIGKIISLLPD--NLKKTISDMTIEGDINVSGEVQGK 353

Query: 338 --EKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374
                  +     D      ++K       D   Q  F+
Sbjct: 354 LQGDTIPSIMANIDIKHTKYSQKGLPMTLRDINGQIQFN 392


>gi|149200338|ref|ZP_01877357.1| putative ATPase involved in pili biogenesis [Lentisphaera araneosa
           HTCC2155]
 gi|149136574|gb|EDM25008.1| putative ATPase involved in pili biogenesis [Lentisphaera araneosa
           HTCC2155]
          Length = 1378

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/408 (10%), Positives = 116/408 (28%), Gaps = 44/408 (10%)

Query: 1   MLRRVLIGLG---------FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK 51
           ML+++   LG               +   F     I     R    +Q + ++ + + ++
Sbjct: 1   MLKKISPYLGQTKKTRRIRITLISCVFFYFIFLGLIAPVIVRSQATKQISELIQRPVQIE 60

Query: 52  GGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110
              KI I PF  S+  K   I + ++ +     E   +  E   + +      ++ + +P
Sbjct: 61  ---KISINPFCNSISIKKFAILETDN-NEFLSWEEFYINFELSSIFTFSWNFNEIALKKP 116

Query: 111 HLNFYLSSKGVSNWFQ-----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159
            +     +  + N+                    I  + ++   V  G++ I D    + 
Sbjct: 117 QVKVSRLTAQLFNFSDIIETLNQLPKQEVDEPTPIPPIFIKSFTVTDGQVLIKDLSRGKE 176

Query: 160 ---------YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF 210
                      +S+ + +I+    N      +      +  +G  N     S   +  N 
Sbjct: 177 KSLEVPSIDLSISNFHTKINKDKNNHYDFRILTEHNAGLHWQGQVNISPLSSKGTLKING 236

Query: 211 PAKNKAI-----SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
                        L   +      + ++   +        +  G F++     +  +   
Sbjct: 237 AKIKNIYDAFADELPFTIVSGDIGLELNYTTSFDKKLSFQVSDGQFTLDQFNVEYKDKSP 296

Query: 266 SAKKSRLSG---NFKISDGNVRISRYKLQSILPNSSTDEDNK-TKVSQDEENLLNFSENG 321
             + + L     ++ ++  N+ +   +       S+  E      +   E +    +  G
Sbjct: 297 LIQLNALKISDVSYDLNSQNLIVPLIEFTDTNAYSTLLETGLPKSLRLTELDAFTQALIG 356

Query: 322 AESMHDLN-ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
            +     N  +   ++         +     +    K          +
Sbjct: 357 EQKAPQTNASSPSNQKNGISLAKSPINFVIKEVRGEKLNAYFTDESTQ 404


>gi|218885319|ref|YP_002434640.1| hypothetical protein DvMF_0212 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756273|gb|ACL07172.1| hypothetical protein DvMF_0212 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 1217

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 3/127 (2%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR + I L  +   V  G   +   +D            T + G    V+GG+++   P 
Sbjct: 3   LRPLPIILCLVLLAVGGGYAALRHLVDSDAAARQLGESLTALTGHASRVQGGVRVVFDPD 62

Query: 62  PSVFFKDIRIDQKE---DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
           P+V  +D+ +DQ       +   ++          PL SG + V  + + +P L      
Sbjct: 63  PTVVARDVIVDQAPPFAGQAPLLRMAEARFNLRLAPLFSGRVEVRGVEVARPQLVLLADG 122

Query: 119 KGVSNWF 125
           +G + W 
Sbjct: 123 EGRNGWD 129


>gi|22299918|ref|NP_683165.1| hypothetical protein tll2375 [Thermosynechococcus elongatus BP-1]
 gi|22296103|dbj|BAC09927.1| tll2375 [Thermosynechococcus elongatus BP-1]
          Length = 1567

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/360 (11%), Positives = 103/360 (28%), Gaps = 23/360 (6%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70
            L ++  +   T   +    +   +  +Q    + + + +     + +          + 
Sbjct: 22  GLVALGAIAVGTRTWWFVRYELAPEIAQQLQQRLNRPVEIGSVEDVGLN-VVRFGSSAVP 80

Query: 71  IDQKEDGSFESK---IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127
               E+GS E     I  + +      LL+G+    D+ + QP L     ++G     + 
Sbjct: 81  SYTPEEGSPELDHALINSIEVAFNPWQLLTGQKLDIDLTLHQPQLTVVQDAQGRWWRTEV 140

Query: 128 KSTMDMIHNVILEKI--HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
           K   +    + L +I   V+ G + ++       Y L  +  + +         L+   +
Sbjct: 141 KPPEEDPTFLQLHQISVRVRDGSV-LVQPFQRPAYLLRQIEGEWTLTPDRQNFALAGQ-L 198

Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII---DLFGNLFWNE 242
           +G +   G        +  +       + + I L +    L   I +    L G+L    
Sbjct: 199 EGQLAGGGQWRLQGDWNPSQEKGQLDLRFRKIPLALGNEILPKTIRVQGGQLEGHLRVRL 258

Query: 243 KQ---PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
                P  +G   +     +   +    K  +     +     +      L+  + N   
Sbjct: 259 PLPETPQVTGQIWLRDGSLRTTFVPQDIKALQAHVQLQGHQAKLHY----LRGAIANVRW 314

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359
                       E   N +   +            +          ++   ++   + + 
Sbjct: 315 QAVGTVS----PERGWNINAQVSSFDLVP-ALRALQMTPPVALRGQVEVPTLRLQGHLEN 369


>gi|308271028|emb|CBX27638.1| hypothetical protein N47_H24600 [uncultured Desulfobacterium sp.]
          Length = 867

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 92/251 (36%), Gaps = 25/251 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++L+  G + ++ L+  F +P FI+  D            + +K+A+ G +K+ IL  
Sbjct: 1   MKKILVTTGIVLALFLLVLFLLPFFININDIVAKQIPVIEKKIHRKVAI-GDVKLTILSG 59

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                 ++ I    D       +IE L    + LPLL  EI +  + I++P +    +++
Sbjct: 60  LGAKINNVSISNNPDFKQQNFVRIEKLKANVKLLPLLKKEIMISSVSIERPSVVIERNAQ 119

Query: 120 GVSNWFQ-------------------RKSTMDMIHNVILEKIHVKGGRIKII---DQESD 157
           G  N+                      K  +  + N+ + KI ++ G  K     D ++ 
Sbjct: 120 GKMNFSDMIVSAKTEKEAKNAPAATETKDPLSTLENIQISKISIREGNFKFFDSSDAKAS 179

Query: 158 QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217
           +   L   NL I    L+    + +D+   +                            +
Sbjct: 180 KEIALDKFNLLIKGVSLSQKIYIDLDTDIYASPKAVHVALSGDLGPIGKNPEPDNIPVDL 239

Query: 218 SLKIQLFPLAY 228
           +L +     ++
Sbjct: 240 TLSLSDINFSH 250


>gi|325300349|ref|YP_004260266.1| AsmA family protein [Bacteroides salanitronis DSM 18170]
 gi|324319902|gb|ADY37793.1| AsmA family protein [Bacteroides salanitronis DSM 18170]
          Length = 824

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 55/418 (13%), Positives = 119/418 (28%), Gaps = 45/418 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI 58
           +++ L   G    V+L+    +P       F+   E+       K +  +   G + I +
Sbjct: 1   MKKALKIAGITVGVILILLLVLPF-----AFQGKIEQLVKQEGNKMLNAQFDFGALNISL 55

Query: 59  ---LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHL 112
               P  SV  +D  +            +   L+     L L       +  + I+   +
Sbjct: 56  LRNFPSASVTLEDFYLKGAGAFENDTLIQAGELTAAVNLLSLFGDSGYDISKIIIEDTKV 115

Query: 113 NFYLSSKGVSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
              +   G  NW            Q          + L+K+ VK   +   D+++     
Sbjct: 116 KAIVLENGQPNWDVMKASAETDTVQESPAESSPIRIKLKKLSVKDLSVSYDDRQAGMYAA 175

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221
           + +L    S  F +  + + ++    S+     G      +A K   N  A        +
Sbjct: 176 IENLKATCSGDFGSERTLVDLELETPSLTYRTGGVPFLNHAALKADMNVAADLVNKKFTL 235

Query: 222 QLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA------------K 268
           Q   ++   I +++ G     +         +      K L   + A             
Sbjct: 236 QDNSISLNAIKLNIDGWAAMQKDGMGMDIKLNTNEVGFKELLSLIPAIYAKDFQDLKTDG 295

Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNS-------STDEDNKTKVSQDEENLLNFSENG 321
           K+ L+   K +    ++ ++++   + N+           D     +  +    N     
Sbjct: 296 KASLTAFAKGTLTQDQMPQFEVALNVENAMFRYPSLPAGVDGINISATVKNPGGNIDATE 355

Query: 322 AESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                            K          D+Q +     +     D    E+ S +  I
Sbjct: 356 VTISPFDFTLAGNPFSLKAIVKTPTSDPDLQATAKGTLDLGKIKDVYPLEDMSLNGTI 413


>gi|311105317|ref|YP_003978170.1| hypothetical protein AXYL_02131 [Achromobacter xylosoxidans A8]
 gi|310760006|gb|ADP15455.1| hypothetical protein AXYL_02131 [Achromobacter xylosoxidans A8]
          Length = 1206

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/339 (10%), Positives = 93/339 (27%), Gaps = 39/339 (11%)

Query: 12  LFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKD 68
           ++ VV +G   V  ++      +R   E  A+  +G ++ + G I+ +     P +    
Sbjct: 4   IYGVVALGLLGVRYWVLPRVDQWRPQIEAYASQALGSRVTI-GSIQANWHGLNPKLDLTS 62

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128
           +++   ++      +  +S    +  +L+   ++  + +++P L              + 
Sbjct: 63  VQVYD-DEVDPVLSLPSVSAVLAWRSILTLSPKLLRLQVERPELTLRRDPANHLWVAGQD 121

Query: 129 ------------STMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLN 175
                           +       ++ ++G  I+  D+        L+ ++L      L+
Sbjct: 122 IDLNASDQRSDLDHPALRWLSAQRELRIRGATIRWQDELRGAPELTLTSVDLLARNGSLS 181

Query: 176 IISPLSIDSIKGSVI-AEGTGNFDNKRSAFKITA---------NFPAKNKAISLKIQLFP 225
               L   +        E  G F+                         + ++ +     
Sbjct: 182 HRFVLKAAADGALARNVELRGEFNRSLFTVNAANPGNWGGQLYAQLDDVEPLAWQPWFEV 241

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
            A    +     L     +         A    +       A+       +         
Sbjct: 242 PAVAGRLSGRAWLQLERGKFT-DLTADAAARGLQWTATPQGAQAPGFKAGYA-------- 292

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
            + ++Q  LP      D            ++ S    + 
Sbjct: 293 -QVRIQ-GLPGDFIQLDGVPLARSPGAPAVSVSGKAEQL 329


>gi|332525840|ref|ZP_08401981.1| hypothetical protein RBXJA2T_08310 [Rubrivivax benzoatilyticus JA2]
 gi|332109391|gb|EGJ10314.1| hypothetical protein RBXJA2T_08310 [Rubrivivax benzoatilyticus JA2]
          Length = 1194

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 95/268 (35%), Gaps = 26/268 (9%)

Query: 29  WTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS---FESKIE 84
               +   E++ + ++G+ + V    ++   P   ++  + +++D     +    +++IE
Sbjct: 34  PRVVKTQLEQRGSALLGRGLHVA---EVSFSPLTLTLELRGLQLDAAAGDAGAGPQARIE 90

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-------QRKSTMDMIHNV 137
            L++      LL+G   V  + +D P L    ++ G  +                     
Sbjct: 91  RLALNLSARSLLAGLPIVEALQVDAPSLRLARTAAGRYDVDDLIARLTAPSPPDATPARF 150

Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197
            L  + V+GGR+   D+ + + + ++ + L +           + + +   V    +   
Sbjct: 151 ALYNLRVQGGRLDFDDRPAGRQHVVNAVELALP------FVSNAPEQVDVDVEPRLSLRL 204

Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGD 256
           D      +  +   A ++   L ++L  LA  P+   L  +L    +  + SG       
Sbjct: 205 DGSALTLQGRSRPFAADRESLLTLELPSLALDPLWPYLPHSLPLRGQGGVLSGRL----- 259

Query: 257 FSKLLNLELSAKKSRLSGNFKISDGNVR 284
             +         +  L G   +S   + 
Sbjct: 260 DIRFAQPAGKPPELALHGPLTLSSIALA 287



 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 83/264 (31%), Gaps = 24/264 (9%)

Query: 37  ERQATLIVGKKIAVKGGIKIHIL----PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92
           ++      G+   V G +++           +     R+D    G        L +    
Sbjct: 453 QQLLQTPTGR---VDGRVELDWAAGHDGRLMLRLPQARVDGLRWGRQALA--TLELTGLG 507

Query: 93  LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ-----------RKSTMDMIHNVILEK 141
             L +  +    + +D+P L+    ++G  N                ++       +L +
Sbjct: 508 ADLRARRLEAEALRLDRPALDLERDAQGRWNVLAMLRPPAAGAAPATASAGPAWQAVLRR 567

Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE-GTGNFDNK 200
           + + GGR+ + D  +          L ++A  L   +      ++ S+       +    
Sbjct: 568 LKIDGGRLHLSDAAAAAPVGFGVQALALTAGELRWPATAQPSPLELSLQLAPDRVSGAPA 627

Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL 260
               ++ A      + ++ + +L     P+ +      +W  + P+      +       
Sbjct: 628 PVPGRLQAQGTLALEPLAWRGRLSLSRLPLQV---AEPYWRAQLPVQVRRAELGWRGDTE 684

Query: 261 LNLELSAKKSRLSGNFKISDGNVR 284
           L L        L GN  ++D  V+
Sbjct: 685 LRLTPGGPAFSLRGNAMLADLRVQ 708


>gi|171060190|ref|YP_001792539.1| putative transmembrane protein [Leptothrix cholodnii SP-6]
 gi|170777635|gb|ACB35774.1| putative transmembrane protein [Leptothrix cholodnii SP-6]
          Length = 1450

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/392 (10%), Positives = 98/392 (25%), Gaps = 36/392 (9%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIH--ILP 60
           +L     + S+V+    T+   I      +R + E  ++  +G  + + G + +   +  
Sbjct: 25  LLRAAIGVASIVVAAWLTLQWGILPRLDHWRPEIEAWSSRSLGLPVRI-GTLAVRGDLW- 82

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-----SGEIRVFDMYIDQPHLNFY 115
            P++  +D+++          ++  +        LL          +  + +    L   
Sbjct: 83  SPTILVRDLQLLAANG-QPGLRLADVEAVITPGSLLPRSLTDWRPHLRRLSLRGADLAVQ 141

Query: 116 LSSKGVSNWFQRKSTMDMI--------HNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLN 166
               G                        +   ++ +    +   D         LSD+ 
Sbjct: 142 RLDDGRWQLAGLVLADGDGSTARRLVDWLLRQGEVVIAASTLTYADTRLGPAPARLSDIE 201

Query: 167 LQISARFLNIISPLSIDSIK---GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
           L    R       L + +     G + AE       +                    IQ 
Sbjct: 202 LLWRNRLGRHRLTLGLSAPPDWGGPLRAELDLR---EPLLAAAGLWRSGDWARWRTDIQA 258

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
              A  +             Q + +G     G+ +  L L     + R S        ++
Sbjct: 259 QLPAVALR-----RAQALLPQSVTNGRSWQGGNGALSLALRRDQGEWR-SARITADLRDL 312

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343
           ++S       L  +        ++       L    +  +                   +
Sbjct: 313 QLSPAPGAEPLRIAQLAGTLVAQID---ARSLQLQASDWQLQLADGAAPSATRTTAPASS 369

Query: 344 DDLKKDDIQYSVNKKEEKDNSHDKENQENFSG 375
             L  D    +  +   + +  D         
Sbjct: 370 WSLNWDRSDAAQARHTLQADRLDIATLATLVP 401


>gi|33862711|ref|NP_894271.1| hypothetical protein PMT0438 [Prochlorococcus marinus str. MIT
           9313]
 gi|33634627|emb|CAE20613.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
           9313]
          Length = 1478

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/373 (11%), Positives = 100/373 (26%), Gaps = 26/373 (6%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R  ++ L     V +     V   +     R   E+Q +  +G  + +     +      
Sbjct: 15  RPAVLLLTSSLVVWVGADRVVAALL--ERLRPQLEQQLSKPLGHPVKIGVYQGLRPW--- 69

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            +      +         + + GL++    +  L     V  + ++   L    + KG  
Sbjct: 70  GMAIGPTEVLPGSHDDSTASLSGLTISLAPMASLFRLRPVAVLTLEGSRLTLRRNHKGFY 129

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS-DLNLQISARFLNIISPLS 181
            W    S  +    V L+    +  R++I     +       DL L       ++   L 
Sbjct: 130 -WVPGPSKGEPPPKVDLQLRLTQPARVRIEPANLEFTATTRADLQLAEGWANGSVQFVLP 188

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
               +G    +G G +D          +  +      L     P+     I     +  N
Sbjct: 189 ---DRGRFFLKGRGRWDRLELQAHARLDQISLEPLQGLLPGTLPMQMQGQIGGDLQVSLN 245

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
           + +    G  S+         L+ S                +++   + +     +S   
Sbjct: 246 QGRMGCKGALSLVRFQLAGGPLKKSLS--SREAKINCRQDRLQLPLSQWRYGPWTAS--L 301

Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361
               +++           +       +N+        +   N    + ++  S       
Sbjct: 302 KGGARLN-----------HSYNLDLKVNQRQ-QGHAFQARINGPWHEPNLHASGRWTLAP 349

Query: 362 DNSHDKENQENFS 374
               D   Q N  
Sbjct: 350 KIPVDGPLQLNLQ 362


>gi|222055688|ref|YP_002538050.1| hypothetical protein Geob_2599 [Geobacter sp. FRC-32]
 gi|221564977|gb|ACM20949.1| conserved hypothetical protein [Geobacter sp. FRC-32]
          Length = 546

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/336 (12%), Positives = 102/336 (30%), Gaps = 33/336 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV-GKKIAVKGGIKIHILPF 61
           ++ L+ +  +   V V  +    F+D    R   E+     + G  I++ G + + ++  
Sbjct: 26  KKALLWVFSILLFVAVALYVASFFLD-EPLRRYTEKTVNKRLKGYSISLSG-MHLQLVGG 83

Query: 62  PSVFFKDIR-IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            +V    ++ +         + I        +  LL G +    + ID+P ++     + 
Sbjct: 84  -TVTLDGLKVLQDAHPVPPIAVIPSTKGSISWRDLLYGRVVA-TIGIDRPKMHID-LQQL 140

Query: 121 VSNWFQRKSTMDMIHN--------VILEKIHVKGGRIKIIDQESDQVYFLSDLNL---QI 169
            S    ++   D            + +    ++   I  +D+++ +   L++LN+    I
Sbjct: 141 KSEMTSKEKLKDRGWQEAIEAVFPLKINNFVIRNASITYVDKDAGKPLHLTNLNVTAGNI 200

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
               +      S   +   +   G G FD   +        P      + K++  PL Y 
Sbjct: 201 RNVRVKDKVYPSSLHMDTVIFGSGRGQFDGNANFLS----QPVPGIKGTFKLEGIPLDYF 256

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
             +    NL   +     SG    +   + +              + +     +      
Sbjct: 257 KPVASHINLSVRKGVLSLSGNMEYSPTIASVQ-----------VKDLQFKGLEMDYVHSA 305

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
             +        +  K       +  +    +     
Sbjct: 306 ATAKAEKKRAKKVGKAAGKVSNKPEIQLRIDRMRLT 341


>gi|302879973|ref|YP_003848537.1| hypothetical protein Galf_2780 [Gallionella capsiferriformans ES-2]
 gi|302582762|gb|ADL56773.1| hypothetical protein Galf_2780 [Gallionella capsiferriformans ES-2]
          Length = 1030

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 83/309 (26%), Gaps = 32/309 (10%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65
           L   G + SV+L     +P  I     +   E+  T   G  + +         PF    
Sbjct: 13  LTSTGLILSVILFSWLVLPHLI-----QSQAEKYFTDKTGHHLTMATP---SFNPFELSL 64

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW- 124
                   + DG        L +      L  G +   ++ +D       L  +G  NW 
Sbjct: 65  RLSGLRLTEPDGKPLLAFRELLVNFSSASLYRGALVFDNIKVDGLEATAVLLPEGKLNWS 124

Query: 125 --------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS----DLNLQISAR 172
                    +  +T   +    +  I + G ++   D      +       DL L   + 
Sbjct: 125 GLITALQSPETPATDAPLPRFDIRHITLSGTQVDFTDNRLKPAFTTRIEPMDLELNELSS 184

Query: 173 FLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKIT---ANFPAKNKAISLKIQLFPL 226
                    + +       ++ +G    D   +   +     N    +      + +   
Sbjct: 185 LPGDQGKFRLSATTSFGARLLWQGQVRLDTLTANGNVAVSEVNLAQLSGYFKDSLPVKLS 244

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGV-FSVAGDFSKLLNLELSAKKSR----LSGNFKISDG 281
                I     + +++    ++    +      +L          +      G F ++  
Sbjct: 245 QGVAGITTDYRVGYDKGALSFNLDHLNAKLSGIQLAYPAGPGVSIKSIEVREGRFDLAKN 304

Query: 282 NVRISRYKL 290
            + +    +
Sbjct: 305 RLLLDSLNI 313


>gi|39937739|ref|NP_950015.1| AsmA family protein [Rhodopseudomonas palustris CGA009]
 gi|39651599|emb|CAE30121.1| possible asmA protein [Rhodopseudomonas palustris CGA009]
          Length = 605

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 76/264 (28%), Gaps = 19/264 (7%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR--IDQKEDGSFESKIE 84
           I         + +     G ++ + G   + + P  ++   D+   +          KI 
Sbjct: 26  IPAGALTGAIQSRIERDTGYRVTIAGTGTVRLFPAVALTLHDVSAELPGGRTTDPRLKIA 85

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--QRKSTMDMIHNVILEKI 142
            +        L+S   R+ ++ +  P L+  L   G          +         +E+I
Sbjct: 86  TVRAELPLTSLISATPRLTELTLISPELHLPLLR-GRDEAAATPAPARKSSAELADIERI 144

Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202
            V+ G + +     +    ++ +   I     +           G + A G+        
Sbjct: 145 VVQDGVVVMTSTADNIERRIAGIQADIEREDAD-----------GPITASGSATLGRSPL 193

Query: 203 AFKITANFPAKNKAISL-KIQLF-PLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSK 259
           +F++T   PA +K   L  + L  P      +               +G    +      
Sbjct: 194 SFELTTTPPADDKQPMLVDLTLDAPGLLTSRLSAKAEARLRGTTFAVNGISGKLGDAPFN 253

Query: 260 LLNLELSAKKSRLSGNFKISDGNV 283
                  A K  +  +      ++
Sbjct: 254 GWASVDVAGKPVVKLDLDFQRLDL 277


>gi|332667995|ref|YP_004450783.1| AsmA family protein [Haliscomenobacter hydrossis DSM 1100]
 gi|332336809|gb|AEE53910.1| AsmA family protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 1055

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 108/303 (35%), Gaps = 30/303 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------ 55
           ++R+L+ LG L  +++  AF +P       F+++   +A   +   +  K          
Sbjct: 1   MKRLLLALGVLLVLLIGTAFAIPYL-----FKDEILAKAKTAINANLNAKVDFSDASLSM 55

Query: 56  IHILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSG--EIRVFDMYIDQPH 111
           +   P   +   +  ++  +  +    + ++ +++  +F  + +G   I++  + +D+P 
Sbjct: 56  LSTFPNLGLSMDNFTVEGIDTFAGVKLADVKKMTLVLDFWSVWNGMNPIKIKSVNVDEPV 115

Query: 112 LNFYLSSKGVSNWFQRKS-----TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
           ++  ++ +G +N+   K      +      + LE   +  G +   D           +N
Sbjct: 116 IHVLVTKEGAANYNVAKPSDDTSSTTTDFKIDLEDYRINNGSLVYDDASVGAYVSAKGIN 175

Query: 167 LQISARFLNIISPLSIDSIKGSVIA--EGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
              S     +I  L   +   S+     G    +N  ++              +LK +  
Sbjct: 176 HSGSGDLTAMIYDLDTQTKIDSLTVTYGGISYLNNAATSLDAVFQVDQNQSKYTLK-ENN 234

Query: 225 PLAYPIIIDLFGNLFW-NEKQPIYSGVFSVAGDFSKLLNLELSAK------KSRLSGNFK 277
            +   + +   G +   N+   +    F    +  + L   +         + ++ G F 
Sbjct: 235 LVLNVLSLQGDGWVQLPNDDDVVMDLNFKAPQNDFRNLFSIIPGAYLAGYEQVKVDGKFD 294

Query: 278 ISD 280
           ++ 
Sbjct: 295 LNG 297


>gi|260220191|emb|CBA27483.1| hypothetical protein Csp_A02500 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 1262

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/376 (10%), Positives = 114/376 (30%), Gaps = 33/376 (8%)

Query: 29  WTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSM 88
               +   + + + ++G+++ + G I         +  ++  +   +    +  ++ + +
Sbjct: 34  PPLVKSQAQSRLSELLGRQVTI-GSIAFSPW-SLELTVREFAVATADGKGVQFSLDRVYV 91

Query: 89  RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILE 140
            AE   L      +  + +D P +       G  +             +         + 
Sbjct: 92  DAEAQSLFRLAPVIDAVTVDAPKVQLTHLGAGRYDIDDIIQRLNKPDDTPAGSTPKFAVY 151

Query: 141 KIHVKGGRIKIIDQESD--QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT---G 195
            + +  G +   D+     +V+ L DL + +            + S + + +  G+    
Sbjct: 152 NLTLNQGSVDYTDRAGGAERVHTLRDLQISLPFLSSFDSKRDVLVSPRLAFVLNGSHFDS 211

Query: 196 NFDNKRSAFKITANFPAKNKAISL---------KIQLFPLAYPIIIDLF-GNLFWNEKQP 245
             +    A     +   K   + L          + + P +  +  D+  G +   +   
Sbjct: 212 EAEGTPFAQSRKGDAELKISQLDLAPYLPYLPANLPVKPQSAVVDADIKLGFVQSPQTAV 271

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLS---GNFKISDGNVRISRYKLQSILPNSSTDED 302
             SG  +V+    +    +       L     + +  + +V++S   L + + N     D
Sbjct: 272 TLSGSVTVSRLAVQDTKGKPLFSADSLQVGLADVRPLERSVKLSGITLNAPVLNVVRAAD 331

Query: 303 NKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN-DDLKKDDI---QYSVNKK 358
               +          + +   +  D       ++ E        L+ D +     SV+  
Sbjct: 332 GSLNL-LPPAPAKQTAPDNVAARADSTGAGGQKDAEIPAPTPWALQLDTLALKDASVDWI 390

Query: 359 EEKDNSHDKENQENFS 374
           ++      +    +F 
Sbjct: 391 DQVTAPATRLGLRDFQ 406


>gi|192293520|ref|YP_001994125.1| AsmA family protein [Rhodopseudomonas palustris TIE-1]
 gi|192287269|gb|ACF03650.1| AsmA family protein [Rhodopseudomonas palustris TIE-1]
          Length = 602

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 76/263 (28%), Gaps = 17/263 (6%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR--IDQKEDGSFESKIE 84
           I         +       G ++ + G   + + P  ++   D+   +          KI 
Sbjct: 26  IPAGALTGAIQSMIERDTGYRVTIAGTGTVRLFPAVALTLHDVSAELPGGRTTDPRLKIA 85

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG-VSNWFQRKSTMDMIHNVILEKIH 143
            +        L+S   R+ ++ +  P L+  L  +   +      +         +E+I 
Sbjct: 86  TVRAELPLTSLISATPRLTELTLISPELHLPLLRQRDEAGGTPAPARKSSAELADIERIV 145

Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203
           V+ G + +     +    ++ +   I     +           G + A G+        +
Sbjct: 146 VQDGVVVMTSTADNIERRIAGIQADIEREDAD-----------GPITASGSATLGRSPLS 194

Query: 204 FKITANFPAKNKAISL-KIQLF-PLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKL 260
           F++T   PA +K   L  + L  P      +               +G    +       
Sbjct: 195 FELTTTPPADDKQPMLVDLTLDAPGLLTSRLSAKAEARLRGTTFAINGISGKLGDAPFNG 254

Query: 261 LNLELSAKKSRLSGNFKISDGNV 283
                 A K  +  +      ++
Sbjct: 255 WASVDVASKPVVKLDLDFQRLDL 277


>gi|124023543|ref|YP_001017850.1| hypothetical protein P9303_18431 [Prochlorococcus marinus str. MIT
           9303]
 gi|123963829|gb|ABM78585.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
           9303]
          Length = 1478

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 88/322 (27%), Gaps = 16/322 (4%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R  ++ L     V +     V   +     R   E+Q +  +G  + +     +      
Sbjct: 15  RPAVLLLTSSLVVWVGADRVVAALL--ERLRPQLEQQLSKPLGHPLKIGAYQGLRPW--- 69

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            +      +         + + GL++    +  L     V  + ++   L    + KG  
Sbjct: 70  GMAIGPTEVLSGSHDDSTASLSGLTISLAPIASLLRLRPVAVLTLEGSRLTLRRNHKGFY 129

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS-DLNLQISARFLNIISPLS 181
            W    S  +    V L+    +  R++I     +       DL L       ++   L 
Sbjct: 130 -WVPGPSKGEPPPKVDLQLRLTQPARVRIEPANLEFTATTRADLQLAEGWANGSVQFVLP 188

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
               +G    +G G +D          +  +      L     P+     I     +  N
Sbjct: 189 ---DRGRFFLKGRGRWDRLELEAHARLDQISLKPLQGLLPGTLPMQMQGQIGGDLQVSLN 245

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
           + +    G  S+         L+ S                +++   + +          
Sbjct: 246 QGRMGCKGSLSLVRFQLAGGPLKKSLS--SREAKINCRQDRLQLPLSQWRYG----PWTA 299

Query: 302 DNKTKVSQDEENLLNFSENGAE 323
             K     +    L+   N  +
Sbjct: 300 SLKGGARLNHSYNLDLKVNQRQ 321


>gi|124003476|ref|ZP_01688325.1| putative outer membrane protein [Microscilla marina ATCC 23134]
 gi|123991045|gb|EAY30497.1| putative outer membrane protein [Microscilla marina ATCC 23134]
          Length = 1097

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 47/351 (13%), Positives = 111/351 (31%), Gaps = 41/351 (11%)

Query: 31  DFREDFERQATLIVGKKIAVK----GGIKIHILPFPSVFFKDIRIDQKED--GSFESKIE 84
           D +   + +    V   +       G       P  +V  +D  +  K+   G   + ++
Sbjct: 46  DIKAKIDEEIAKSVNAHVYFDIDKFGLSMFSNFPNITVSMEDFGVVGKDKFKGDTLTAVK 105

Query: 85  GLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI--------- 134
              +  +   +L S +I+V  +Y+D P +   +   G +NW   K+              
Sbjct: 106 EFEVEVDVWSVLFSDKIQVRGIYLDSPKIYAKVLKDGTANWDIMKADTTQKDEKKPEKDK 165

Query: 135 -------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187
                   NV +++  +K   I   D  +     ++ L  + S  F   +  L   +   
Sbjct: 166 SDTTQTNFNVGIKRWKIKNADIVYADAATPMYASITKLTHKGSGNFTQAVFDLKTKTTVD 225

Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL-FWNEKQPI 246
            +                       +NK+I + + L             N    NE    
Sbjct: 226 KIDFGYENV-------------RYVENKSIDVDLTLNMDMEKNKFTFKQNAIKINEFVFK 272

Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN--K 304
           + G   + G+    ++++ +AK++       +  G V     + Q +        D   K
Sbjct: 273 FDGFVQMVGNDIN-MDIKYAAKENEFKNILSLVPG-VYTEMEEFQKMKTEGKFAFDGFVK 330

Query: 305 TKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV 355
              ++ +      +   ++++    +          + +   K  D++ +V
Sbjct: 331 GTYNEKKYPAFGLNFKVSDALFQYPDLPTSVNNINIDVSVGNKTSDLEKTV 381


>gi|83816828|ref|YP_445027.1| hypothetical protein SRU_0893 [Salinibacter ruber DSM 13855]
 gi|83758222|gb|ABC46335.1| hypothetical protein SRU_0893 [Salinibacter ruber DSM 13855]
          Length = 921

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/282 (14%), Positives = 84/282 (29%), Gaps = 15/282 (5%)

Query: 59  LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           LP P+V     R+   E    +   +   L++     PL   +IR   + ++ P + + +
Sbjct: 2   LPAPAVRVSGFRLANAEGYGPAPAVEARALTVDVALWPLFLLDIRPTAVALEAPVVRYEV 61

Query: 117 SSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS---DL 165
              G +N+                 +  + +    V G R+   D+ + Q   L     L
Sbjct: 62  GKDGATNFDDLGASDTTAAAGDESPLAGIPVSSFRVSGARMNYTDRSTGQALRLDFEAQL 121

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
           + +     +     + + S++  + + G      + +A             + ++  L  
Sbjct: 122 SARPDGAAIRSEGTVDLRSVRALLPSVGPDTLVVQEAAATYDVRVAPSEGEVEVR-TLQL 180

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
              P+ I   G +     QP     F         +    +       G   +  G V  
Sbjct: 181 DTAPVTIAADGTIAGLNAQPALDLAFETGRTDLAEIAAFAAVAGVNPRGTLALD-GTVAG 239

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
                   L  S+T    +  V  +   LL           D
Sbjct: 240 PLADTTEGLALSATGRLAEAGVDYEGTALLRDLSADLSLTLD 281


>gi|88811883|ref|ZP_01127136.1| probable transmembrane protein [Nitrococcus mobilis Nb-231]
 gi|88790767|gb|EAR21881.1| probable transmembrane protein [Nitrococcus mobilis Nb-231]
          Length = 1252

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/321 (12%), Positives = 105/321 (32%), Gaps = 17/321 (5%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKKIAVKGGIKIHILPF-P 62
           +L G+  +   V +    + L + +   F  + E   T  + + +A+   +  H++ F P
Sbjct: 1   MLYGVAGVLVAVAIALTALRLALAYAPAFHGELEALLTQWLHRPVAIA-ALDAHLVGFTP 59

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNFYLSSKGV 121
           ++   ++RI        +       +  +   +L   + R  ++  D+  +     + G 
Sbjct: 60  TLVLHEVRIGGTSKHPADLATSRFEVSIDLGAMLRSLQPRFVELRADRLEVTLRRHADGR 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI--SARFLNIISP 179
            +  ++ S        ++ ++ ++   +K+IDQ   +++ LS L+      A    + + 
Sbjct: 120 ISLGEQASDAGNRLFALISRLRLRDASVKLIDQRRGKIWRLSKLHAWFWHDAGDARLAAH 179

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSA---------FKITANFPAKNKAISLKIQLFPLAYPI 230
                   +   E    +     +          ++      +  A+ L           
Sbjct: 180 FLPVQPHMAKRMELAVGWHGSPRSLAEVNGSGYLRLREARFGQIGAV-LSPVWSVPVVAG 238

Query: 231 IIDLFGNLFWNEKQP-IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
             D    L     +P   S   S  G         +  ++    G+++ +D    +    
Sbjct: 239 QADAQVWLSVRGGRPERVSVDASAWGLELSGAEGTMRFRRLAGRGHWQRTDDGWNLDINA 298

Query: 290 LQSILPNSSTDEDNKTKVSQD 310
           LQ   P ++        V   
Sbjct: 299 LQLQRPGAAPGSPGNVSVRYA 319


>gi|94969501|ref|YP_591549.1| hypothetical protein Acid345_2474 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551551|gb|ABF41475.1| protein of unknown function DUF490 [Candidatus Koribacter
           versatilis Ellin345]
          Length = 1369

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/336 (12%), Positives = 106/336 (31%), Gaps = 47/336 (13%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           R++   +     ++        L  D      R     Q     G K+ + G I+ ++  
Sbjct: 12  RKIRQAVYGSLVLLTFVCTGWYLTSDSFRELIRHRIINQLEDATGGKVEI-GRIQWNLA- 69

Query: 61  FPSVFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
              +    + I   +    +   ++  +      +  L  +I + ++ +  P +N  +  
Sbjct: 70  RLRIGIDSLTIHGLEPAGQAPLLQVRRIDANIRIVSFLQRQISLKNLNVSNPSVNLLVYP 129

Query: 119 KGVSNWFQRKS--------TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
            G +N    ++         MD + ++ +  + V  G +K+ ++ +      SDL +++ 
Sbjct: 130 DGSTNQPTPRTRKAGIPTGPMDPLFDIAVRNLVVTNGLLKVNERRTPFDLAASDLTIRLG 189

Query: 171 ARFLNIISPLSID--------SIKGSVIAEGTGNFDNKRSAFKITAN-FPAKNKAISLKI 221
            +         I+                    +F   R++ ++ A    ++   ++   
Sbjct: 190 YQSNPEFYNGRIELGKFDAQYDDLRPFSLGAVFDFRLYRNSIEMRAAHIISERSELAFDG 249

Query: 222 QLFPLAYP-------IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL-- 272
           +L   A P         IDL         + + SG   + G  +      LS     L  
Sbjct: 250 KLTNFAEPRVEGNYTAKIDLRQIAAITRVKGVQSGSVELRGKGAFDAQRFLSNGNVTLLD 309

Query: 273 ---------------SGNFKISDGNVRISRYKLQSI 293
                          S N+ +    +   +  L ++
Sbjct: 310 VGWSNPSVHVISVSGSSNYYVDRDKLAFDQVALNAL 345


>gi|312795182|ref|YP_004028104.1| hypothetical protein RBRH_01651 [Burkholderia rhizoxinica HKI 454]
 gi|312166957|emb|CBW73960.1| Hypothetical protein RBRH_01651 [Burkholderia rhizoxinica HKI 454]
          Length = 1442

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 77/305 (25%), Gaps = 20/305 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFT------VPLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55
           LRRVL     +   +  GA          +F      R   E++ +  +  ++ + G + 
Sbjct: 31  LRRVLACCASVAIALYFGAAATYVGLRYVIFPQLDSLRPHIEQRISDTLHAQVHI-GRLT 89

Query: 56  IHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
                  P++    + I   +       +   S    +  L      +  + ++QP +  
Sbjct: 90  GRWSGLQPTLDIDQLTIMGPDGQR-MLAVPTASATLSWRSLPRLAPVLSSLIVEQPEIFA 148

Query: 115 YLSSKGVSNWFQRKSTMDM-------IHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166
                G       +               +    I ++GG +   D +       L  ++
Sbjct: 149 ERHPDGTYTIAGVRVDPRQHGNSALLHWLMTQRAIVLRGGVLHWSDAQRGLPTLTLRGIH 208

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
           + I  R L     +        +          + S  K           + +      L
Sbjct: 209 VAIDNRGLIHRLGVQAQPDGRLLRGPLDLRARLRHSPLKPLTEPAGWTGTMFVSSGNLAL 268

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
                     +   + +         +     +      +   S L      +   + + 
Sbjct: 269 PELARYT---DARLDAQSGTLDVAAWLDFASGEWSGARGALSGSALRLRMDPTLPRLDVP 325

Query: 287 RYKLQ 291
              L 
Sbjct: 326 SIGLD 330


>gi|160900385|ref|YP_001565967.1| hypothetical protein Daci_4953 [Delftia acidovorans SPH-1]
 gi|160365969|gb|ABX37582.1| protein of unknown function DUF748 [Delftia acidovorans SPH-1]
          Length = 1281

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 36/287 (12%), Positives = 91/287 (31%), Gaps = 38/287 (13%)

Query: 33  REDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFE------------ 80
           +   E+QA+  +G+++ V G ++        +  +D+ I + +                 
Sbjct: 45  KSQLEKQASAKLGRQVRV-GAVEFRPW-SLELTLRDLSIARSQAEGAAPESVPSSSSSPQ 102

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMD 132
            +I+ + + A    L      +  + +D P L     S G  +             +   
Sbjct: 103 LQIDRIYVNASIQSLFRLAPVLDAIEVDAPVLRLTQQSLGHFDVDDVLARLAEPGDTPPS 162

Query: 133 MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE 192
                 L  I ++ GR+++ D+   + + L  L L++                +  V+  
Sbjct: 163 KPVGFALYNIALRDGRVELQDEVQRRQHMLEQLQLRLP------FISNLESKREIKVLPH 216

Query: 193 GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS 252
            +   +  R      +    + +  ++ + L  +     +   G +         SGV  
Sbjct: 217 LSFALNGSRFESSAQSTPFTEQRQTAVDLSLQGVDLTPYL---GYVPVTAPVKPRSGVLD 273

Query: 253 VAGDFSKLLNLELSAKKSRLSGNFKISDGNVR----ISRYKLQSILP 295
            A         E +    R++G   +S   +     +   + + +  
Sbjct: 274 -ANLHISFEQAEQAV--VRITGEVSLSGAELHDRDGVPLLRFERLAA 317



 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 47/367 (12%), Positives = 94/367 (25%), Gaps = 48/367 (13%)

Query: 38  RQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS 97
            QA   V   + + G + +           D       DG    + E L+   + +  L 
Sbjct: 281 EQAEQAV---VRITGEVSLS-----GAELHD------RDGVPLLRFERLAAVLKNVQPLQ 326

Query: 98  GEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---------------RKSTMDMIHNVILEKI 142
               +  +    P +     ++G  NW                   S       V L+++
Sbjct: 327 SVAELESVQWSAPEIFAARDAQGRINWTAMGGASSPDARPAAEKPASDAPQPWKVSLDRL 386

Query: 143 HVKGGRIKIIDQE-----SDQVYFLSDLNLQISARFLNIISPLSIDSI-----------K 186
            V    +   D       S       +L+LQ+      +  PL + +             
Sbjct: 387 SVAHATVHWRDAAPDAGKSGAALQARELSLQVRDIRWPLEQPLQLAASMQVQPESAGEGA 446

Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
                + +G   +K+    I+A       A              ++     L WN    +
Sbjct: 447 KPAELQLSGALTDKQGQLAISARQLPLQLAAPYLSAHIKPELTGLLSTDAGLGWNGSAMV 506

Query: 247 YSGV-FSVAGDFSKLLNLELSAKKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDNK 304
                  V     K     +     +L      ++   V + R  LQ        D   +
Sbjct: 507 VQVAGLGVEQLSLKDKAAPVDIAHLQLEQVQVNLASQQVSVGRLALQKPQLAVLRDAQGR 566

Query: 305 TKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364
               Q      +      ++  D +     + +  +     +   D     N    +  S
Sbjct: 567 WMYEQWLPPASSAPA-SQDAGKDKSRPWGLKLQAVEVDGGAIALRDEAPVRNADSARTVS 625

Query: 365 HDKENQE 371
            D  +  
Sbjct: 626 LDLGSLR 632


>gi|332974205|gb|EGK11138.1| AsmA family protein [Kingella kingae ATCC 23330]
          Length = 705

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 46/340 (13%), Positives = 102/340 (30%), Gaps = 31/340 (9%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66
             +  L    +    T+    D     +          G  ++    I  H+ P P++  
Sbjct: 17  YTVLALVLAYVGAYATLYRVSDVHTLNQRAAT-VLQGTGYSVSFDADIGRHLFPRPTIVL 75

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-F 125
           +++++   +  + +  +  + +   +   L G++ V  + +DQ     Y +++G  N   
Sbjct: 76  RNVQLRANQQNAPDLTVAEMKIGIAWQS-LWGDVVVEKLVLDQAQGKLYRTNQGKWNVSA 134

Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
             ++           +I V+  ++ +     +Q + L D++LQ+          L+ +  
Sbjct: 135 LMQAKQGDAPLPSFNRILVERSQLGV--HYYNQDWTLQDISLQLMPDGDTHRYHLNANIP 192

Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
                A                        A  L+I    L  P   DL       E+  
Sbjct: 193 ALFWDA-------------------FNVQAAGKLQITPDGLLLP---DLAAQFSGKERGY 230

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
            + G    +    +   L     +  L      +  N  I +        N   +  N  
Sbjct: 231 DFVGTLH-SAVQVQQEKLLAKQNRIMLDSKHYQTHINTTIEQL---LHQQNGEWESKNGA 286

Query: 306 KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
            V     +   +      +  D +E     +E   N N  
Sbjct: 287 MVLSANPDEWRYQATLKWAQLDWSEQRARSQELNLNLNAS 326


>gi|160896298|ref|YP_001561880.1| hypothetical protein Daci_0849 [Delftia acidovorans SPH-1]
 gi|160361882|gb|ABX33495.1| conserved hypothetical protein [Delftia acidovorans SPH-1]
          Length = 1384

 Score = 76.8 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/379 (10%), Positives = 107/379 (28%), Gaps = 32/379 (8%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDW-----TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
             LG + +  LV      +   W      ++R   E  A+  +G  + +           
Sbjct: 24  WSLGLVLAFWLVLGSVWGVLHGWIVPRIGEWRPQLESLASRTLGLPVRIGSITARSEGLV 83

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P     D+ ++  E  +   ++  + +      L+   + V  +YID+P L    ++ G 
Sbjct: 84  PRFELGDVVVEDPEHTADALRLPSVVVAVSARSLMR--LGVEQIYIDRPELVVRRAADGR 141

Query: 122 SNWFQRKSTMDMI-------HNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISARF 173
                 + +                 ++ ++GG +  +D+        L D++L +  + 
Sbjct: 142 VFVAGIEISPSSGGDNAAADWLFSQTELALRGGSLLWVDEMRQAPPLALRDVDLVLRNKG 201

Query: 174 LNIISPLSIDSIKG-------------SVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            +    L     +G              +++   GN+                ++     
Sbjct: 202 WSHGMRLDATPPEGWGERFMLAGLFREPLLSTHEGNWQRWSGQAHAMFTQIDLSRLGQYM 261

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYS-GVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
                        L   +   + QP+ +    +V     +        +   L+G   + 
Sbjct: 262 DTSDLRLQQGRGALRAWIDLRQGQPVGAMADVAVNALQLQWRENLEPLQLQALTGRLSVQ 321

Query: 280 DGN-VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH--DLNETDFFEE 336
             +  R +   L+    +         +   +          G +     D  +     +
Sbjct: 322 HQDGWRFAAQNLEFSTGDGLHWPAGNLRARYNPAGASTQGALGEQGEFQADGIDLAILAQ 381

Query: 337 EEKKNKNDDLKKDDIQYSV 355
             ++    +  +  +    
Sbjct: 382 LGQRLPLPEQLQRHLADMA 400


>gi|119483471|ref|ZP_01618885.1| hypothetical protein L8106_05441 [Lyngbya sp. PCC 8106]
 gi|119458238|gb|EAW39360.1| hypothetical protein L8106_05441 [Lyngbya sp. PCC 8106]
          Length = 2096

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/338 (11%), Positives = 104/338 (30%), Gaps = 18/338 (5%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RRVLI  G    V  + A T  ++                I+ + + V    +  +    
Sbjct: 19  RRVLIWGGVGLGVTTIAAGTTAIWFIQNQLAPMVGGIVEGIIERPVTVGPVERFTLS--- 75

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           S+ F    +         +  E + +      + +      D+ +    +     ++G  
Sbjct: 76  SLRFGRSVMPATPTSDSNATTEAVEVAFSLSSIFTNPTLNLDLTLVNADVYLEEDAEGDW 135

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
              +     D   +V    + ++   + +    +     +  LN+  +   ++  +    
Sbjct: 136 IQTELNLEGDPPIDVKFGSVGLRNANVTLTPYVATGSPVVIPLNISRAVVDVSENNERIK 195

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP------IIIDLFG 236
             + GS    GT          +       +   I +      +  P       ++D   
Sbjct: 196 GRLNGSFARGGTFYVQANVFTPETNIEGRLRANNIPVSQFTGLIKAPNFALQRGMVDANI 255

Query: 237 NLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
            +   + +    +G  S+     ++ +L+   +   ++  F+ +    RI   +L + L 
Sbjct: 256 FVKLEDSKLSQVAGKASLDDIQIEVTDLDRPVQP--INAQFRFAGNQARIE--RLTTGLG 311

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
           + + +       +      L+ S+   +   ++  T  
Sbjct: 312 DINVNLSGTATAN----PQLDLSKTQLDFTANIEPTQI 345


>gi|220935438|ref|YP_002514337.1| membrane protein-like protein [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996748|gb|ACL73350.1| membrane protein-like protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 1304

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 68/192 (35%), Gaps = 17/192 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKG-GIKIHI 58
           L+   I +     ++L    T    +    +++RE    +   ++G ++ +     +  +
Sbjct: 32  LKTAAIWITASVLILLAVLVTSLRLVLPMASEYREQMAAELGGLLGHRVEIGALDARWRL 91

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA-EFLPLLSGEIRVFDMYIDQPHLNFYLS 117
           L  P +   D+ I  ++D +    +  + +     L L   ++RV  + +    ++ +  
Sbjct: 92  L-GPRILLDDVAIYGEDDTTPALHVAQVDVGVRAILSLWHRQLRVHSVRVLGADVHIHRD 150

Query: 118 SKGVSNWFQRKSTMDM------------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
           ++G                         +  +   +  ++  R++  D+     Y   DL
Sbjct: 151 AEGGVQISGAGFAPAAGEAAPAAPGTRVLDLLAGTRFQLQSSRLRFSDEILTLDYRFDDL 210

Query: 166 NLQISARFLNII 177
           NL ++     + 
Sbjct: 211 NLDVAVDADRLR 222


>gi|326801836|ref|YP_004319655.1| hypothetical protein Sph21_4468 [Sphingobacterium sp. 21]
 gi|326552600|gb|ADZ80985.1| hypothetical protein Sph21_4468 [Sphingobacterium sp. 21]
          Length = 1036

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 46/400 (11%), Positives = 105/400 (26%), Gaps = 29/400 (7%)

Query: 1   MLRRVLIGLGFLFSVVLVGA-FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI- 58
           +L+++LIGLG   +++L+   F                +     +  ++     +++   
Sbjct: 55  ILKKILIGLGLACTLILLAITFITNFLFKPEKITPIALKAINQQLDGQV-FCKSVELTFF 113

Query: 59  --LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFY 115
              P       D  I  ++                    LL  EI +  + + +P L+  
Sbjct: 114 SSFPRFGARLHDGYILSRDRRDTLVIFSDFRGAVNMTKLLLKKEIDIERITLRRPRLHLV 173

Query: 116 LSSKGVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
           +   G +N+                   I  + ++ + ++       D+ S     +  L
Sbjct: 174 VDQHGNANYDILKKETAEATDTSDVQSAIKKIHIKSLRIEDASFHYEDKGSRLDCRIPHL 233

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
            L+I   +      L + S    +     G    ++    +  +     K+  L      
Sbjct: 234 ALKIGFVYDEDHLLLKLHSDSKQLTVTKGGFVFIRQLNSLLDTDMKLDKKSRKLSFTNGT 293

Query: 226 LAYP-IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
           L    I   L G       +   +           L NL     K  L     +  G   
Sbjct: 294 LKLNDIDFLLDGVFERPNGRKAVNVALQAKMKVPSLANLWKMVPKRYLKTT-DVDVGGRV 352

Query: 285 ISRYKLQSILPNSST--------DEDNKTKVSQDEENLLNFSENGAESMHDLNE--TDFF 334
               +   +                    +  +    +     +      D NE      
Sbjct: 353 FLVLRTNGVYGEGKLPVSRAQLKIHGGSLRYKKFPGQITALEADVESL-LDFNERQRSAV 411

Query: 335 EEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374
              +   +   +       + N  +  +   D E   + +
Sbjct: 412 RINKMLIRGTGIHLSGSVLAQNLLDNPEIEPDVEANIDLT 451


>gi|254514689|ref|ZP_05126750.1| hypothetical protein NOR53_2103 [gamma proteobacterium NOR5-3]
 gi|219676932|gb|EED33297.1| hypothetical protein NOR53_2103 [gamma proteobacterium NOR5-3]
          Length = 1140

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/292 (11%), Positives = 91/292 (31%), Gaps = 34/292 (11%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAE 91
              E Q + I+G++++     +I I     +   ++ +   +        ++  ++   +
Sbjct: 36  PYLEAQVSRILGRRLSFHDAPQIQIKSGLHLSVSNVSLANADWAGQDDMLELRSITAHVD 95

Query: 92  FLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILEKIH 143
              L   ++ +  + ID   L    +  G+SN             +  +    V++  I 
Sbjct: 96  LSTLFDTQVVLETLLIDGLQLRLRENVDGLSNLPQIAGDDTEDTTTEPEHPLPVLIRHIQ 155

Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203
           +   RI   +  + Q   L    L   A              K +++ +G G+  +K   
Sbjct: 156 MSNVRIDRQNDATQQSMSLLIDTLSQEAPN------------KNNLVYQGHGSLQDKPWD 203

Query: 204 FKITANFPAKN-KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262
             I  +  +     + +          + ++    L    +    S   ++ G     ++
Sbjct: 204 LSIDGSGFSSLRSGLDMSATFSGSLGNLKLEGDYRLPNIRELQNLSFNATLQGPVPDRIS 263

Query: 263 LELSAKKSRLSGNFKIS----------DGNVRISRYKLQ-SILPNSSTDEDN 303
                 +   +    +           D  V++ +  LQ S   ++    D 
Sbjct: 264 ALSPILEPNEAAQVVLHISDIDPGLQVDLRVQLPQITLQLSGNIDNPRKSDG 315


>gi|99080933|ref|YP_613087.1| hypothetical protein TM1040_1092 [Ruegeria sp. TM1040]
 gi|99037213|gb|ABF63825.1| hypothetical protein TM1040_1092 [Ruegeria sp. TM1040]
          Length = 1155

 Score = 76.5 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 47/366 (12%), Positives = 106/366 (28%), Gaps = 34/366 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFID-WTDFREDFERQATLIVGKKIAVK-GGIK--IHI 58
           +  +  L  L  + +     +   +D     R + ER+    +G  + ++ G I+  +  
Sbjct: 53  KSTVWTLALLAGLTVAAWVLLDKRLDAPEWLRSEAERRIERHLGG-LQIEFGEIELVVRR 111

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
              P +  +D+ +   +       +E         PLL G++R   + +          S
Sbjct: 112 GWRPRLSLRDVTLFYPDGS-PAVHLEDAQAALAMRPLLRGQLRPKLISLSGLFATLETGS 170

Query: 119 KG-------------VSNWFQRKSTMDMIHNVIL------EKIHVKGGRIKIIDQESDQV 159
            G                    +        + L       ++  +   +  ID+  D+ 
Sbjct: 171 DGAVALSFSDGAAPLRQARNLPQLIEAWDRQLELPILSAVTQVETQAVTLNYIDRRIDRA 230

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKG-----SVIAEGTGNFDNKRSAFKITANF-PAK 213
           + L    + +S +   +        + G     +V A    +  +  + F +  +  P+ 
Sbjct: 231 WTLDGGAVLLSRKGDRVSIDAGFSVLSGREYASTVEANYQSDIGDTAAEFAVVVDQVPSS 290

Query: 214 NKAISLKI--QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR 271
           + A        L  L  PI   L G +         +    V     +  +         
Sbjct: 291 DIASQSPAFGWLDVLRAPISGALRGAVDSEGALRPLNASLQVGRGVIQPNDQLKPIPLQS 350

Query: 272 LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGAESMHDLNE 330
               F        ++  +L       S   + + + V   +  L       + S   LN 
Sbjct: 351 AESYFTFDPARQELAFSRLSVESGWISGQMEGRAELVGVRDGRLTQLVGQLSFSDLKLNP 410

Query: 331 TDFFEE 336
              + E
Sbjct: 411 LRLYPE 416


>gi|117620046|ref|YP_854811.1| AsmA family protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117561453|gb|ABK38401.1| AsmA family [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 688

 Score = 76.5 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/337 (11%), Positives = 104/337 (30%), Gaps = 29/337 (8%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEG 85
             D    +       +   G  + + G +  + L   ++  + +             ++ 
Sbjct: 25  LFDAERAKGPIASWLSQQTGVPVTI-GRLVFNPLHPYTLLAEQVSYGNA------VTLDK 77

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVK 145
           + +  E +  LS ++R+  + + +P +   L ++              I +  ++++ ++
Sbjct: 78  IYLEIESIDWLSRDVRIAHLDLIRPAIKLPLPNQ----LPSLPVHSLTIADSTIDRLSLE 133

Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK 205
              + +          LSD  L    R       L+I+ +     A    N   +     
Sbjct: 134 SDGLTLR----GLNATLSDWQLLNPVRPPQANLTLNINELATPAWALSRLNLAGRLEGQV 189

Query: 206 ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
           ++ +    N    L      L +P    L  N    +   I  G  + A    + ++L+L
Sbjct: 190 LSTDKLTANLFDGLLETGMVLDWPAR-SLRLNNLKTQGMRIEWGTLAKAESPLRQVSLDL 248

Query: 266 S----AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321
                   + +     +++ N +++ +  Q+               +  +     F    
Sbjct: 249 GQIRDLSFNDIERELALNNLNGQLTAFNWQAGS-----TPSGYFSGTLGDLGRGLFQLEA 303

Query: 322 AESMHDLNETDFFEEEEKKN----KNDDLKKDDIQYS 354
            +     +      E + K      N +L  D +Q  
Sbjct: 304 IQGKVAFSTQQLDAELQGKAYEGEFNLELSLDPLQQK 340


>gi|121605795|ref|YP_983124.1| hypothetical protein Pnap_2904 [Polaromonas naphthalenivorans CJ2]
 gi|120594764|gb|ABM38203.1| protein of unknown function DUF748 [Polaromonas naphthalenivorans
           CJ2]
          Length = 1298

 Score = 76.5 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 52/393 (13%), Positives = 109/393 (27%), Gaps = 39/393 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RRVL  +G    +  +    VP        +   E+  T  +G++++V G +        
Sbjct: 28  RRVLWAVGAWLLLWALAYAAVPFI-----LKSQLEKIGTEKLGRRVSV-GAVDFKPW-TL 80

Query: 63  SVFFKDIRID---------QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113
            +   D+ I               + + KI  L + AE   LL        + +++P  +
Sbjct: 81  ELTINDLAIAKAQPAALQPPAAPAAPQLKIRRLYIDAELASLLRLAPVADALVVEEPVAS 140

Query: 114 FYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
                +G  +                       L  + + GG+I  +DQ   + + L DL
Sbjct: 141 LTYLGQGRYDIDDILARLKKPDAQPAGEAPQFSLYNLVLSGGQIDFVDQSVHKTHALRDL 200

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
            L +                +           +  R      A   A N        L  
Sbjct: 201 RLAVP------FLSNLASQREIKTAPHLAFTLNGSRFDTAAVATPFASNHKTDAAFALRG 254

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  DL   L +      +    +V     K+   + +A   R+SG+       +  
Sbjct: 255 ------FDLQPYLAYWPASLPFRLQSAVLHADVKVAFEQTAAPVVRISGSVTADKVRLLQ 308

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           +     +    +     ++  ++ D+   L      +             +   +     
Sbjct: 309 ASGPDAAPGAGAELLAFDRLHLTLDDVRPLEQMVKLSAVELTAPTLSITRDRAGRLNLLP 368

Query: 346 LKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378
           +   D Q +         +     Q +     +
Sbjct: 369 V---DAQSATKNIAISAGAASANGQNDIKNQAV 398



 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 87/302 (28%), Gaps = 45/302 (14%)

Query: 63  SVFFKDIRI-------DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           SV    +R+            G+     + L +  + +  L   +++  + +  P L+  
Sbjct: 298 SVTADKVRLLQASGPDAAPGAGAELLAFDRLHLTLDDVRPLEQMVKLSAVELTAPTLSIT 357

Query: 116 LSSKGVSNWFQRKSTMDM---------------------------IHNVILEKIHVKGGR 148
               G  N     +                                  V++ +++V+GG 
Sbjct: 358 RDRAGRLNLLPVDAQSATKNIAISAGAASANGQNDIKNQAVASAIPWTVLVTRVNVRGGS 417

Query: 149 IKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208
           +   D+       +   +L ++A  +             S   +  G+     SA  +  
Sbjct: 418 VNWRDETLPSPAQIRLKDLVLNASAIAYPF-------AASAPLQFNGSLGLDPSALNVPT 470

Query: 209 NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLLNLELSA 267
              A  K+ +          P ++   G+              + ++     +    L A
Sbjct: 471 QGKAVAKSPAPAPAPVTAPAPALVTFKGSATDRAADITADVAAWPLSMAAKYVGQFLLPA 530

Query: 268 KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFS-ENGAESMH 326
              RL     +        +   Q++   +     +  +++Q   +L++      A+   
Sbjct: 531 LNGRLDAQLGVKWQAALADQP--QALRITAPAIAVSDVQLAQGATSLVSIQRAELAQVEI 588

Query: 327 DL 328
           DL
Sbjct: 589 DL 590


>gi|120613287|ref|YP_972965.1| hypothetical protein Aave_4656 [Acidovorax citrulli AAC00-1]
 gi|120591751|gb|ABM35191.1| conserved hypothetical protein [Acidovorax citrulli AAC00-1]
          Length = 1425

 Score = 76.5 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 47/367 (12%), Positives = 99/367 (26%), Gaps = 34/367 (9%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDW-----TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
             LG L +  L+ A    +   W      ++R   E QAT  +G  + +           
Sbjct: 21  WSLGLLIAFWLLVAVAWGVLHGWIVPRIGEWRPALEAQATKALGVPVRIGALSARSEGLV 80

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V   D+ +   +      ++  +         L   +    +YI++P L+    + G 
Sbjct: 81  PAVELTDVALLDPQG-REALRLPRVVAALSPRSALR--LGFEQLYIERPELDVRREADGQ 137

Query: 122 ---------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISA 171
                                       ++ ++GG ++  D         LSD+++ +  
Sbjct: 138 LVVGGIRLHGGAGSGDDGAAADWVFSQGEVALRGGTVRWTDAMRGAPPLELSDVDIVLRN 197

Query: 172 RFLNIISPLSIDSIKGS-VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
           R       L               G F          A         +   ++       
Sbjct: 198 RGWRHAMRLDATPPASWGDRFTLMGRFRQPLLTTHGGAWRQWSGLLFAQFGRVDVSRLRQ 257

Query: 231 IIDLFG-NLFWNEKQPIYS-----GVFSVAGDFSKLLNLELSAKKS-------RLSGNF- 276
            +D+ G ++               G  +       L ++E +  K         ++G   
Sbjct: 258 HVDIEGIDVARGRGALRAWLDVRRGEVAGGTADVALADVEATLGKGLEPLALASVAGRVG 317

Query: 277 -KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335
            +  +G    S   LQ +  +          V Q   +         E   D  +     
Sbjct: 318 GRWLEGGFEASTEGLQFLTRDGLRWPGGNVSVRQAGRDPRAPEREQGELRADRLDLAALA 377

Query: 336 EEEKKNK 342
           +   +  
Sbjct: 378 QIASRLP 384


>gi|307609691|emb|CBW99200.1| hypothetical protein LPW_09821 [Legionella pneumophila 130b]
          Length = 513

 Score = 76.5 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 54/405 (13%), Positives = 115/405 (28%), Gaps = 37/405 (9%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +L ++L+    L   V +  + +   I     ++    + T I  K+  + G I   + P
Sbjct: 3   LLGKILLVFTALMIFVSITLWILATNIKPETIKQLVSNKITAITHKQSQIDGTISWQLFP 62

Query: 61  FPSVFFKDIRIDQKE-DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P + F  I I  +  + ++   I+ L +  +  PLL G     ++ ID   L     + 
Sbjct: 63  RPGLKFNKIHIGNENLNDNYSLLIDTLLLNLKITPLLKGHFVFSEINIDGLKLFINQENN 122

Query: 120 GVS-----NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE-----SDQVYFLSDLNLQI 169
                   N  Q  +T        ++K+ +  G+I + ++       +        NL+ 
Sbjct: 123 EKPLSSEKNANQYNTTTYPNEQFAIQKLLLSHGQIILNNKGHSTVLKNIQIGAEQFNLKN 182

Query: 170 SARFLNIISPLSIDS--IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
           S   + I + L+  +            G      S      N      +I  ++Q+  + 
Sbjct: 183 SPFSVQIKAKLTDAAFLQTAKANINFKGRVSLSPSIID-ELNSGISKSSIEGQLQIQNIL 241

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF-------KISD 280
                    N      +      F+                    +           +  
Sbjct: 242 LNQFAIKKINATLKTHKR--DIQFNPLTLSLYNGESIGDMDYVIATQQLLINQTATNLDG 299

Query: 281 GNVRISRYKLQSILPNSSTDEDN--------------KTKVSQDEENLLNFSENGAESMH 326
             +  S  K  +I  N                     K  ++  +  + N + +   +  
Sbjct: 300 KQLITSLLKHPAISGNLDYSIHASIPLKALSIESLVSKGTITLKDGEVYNINLDQLLNNL 359

Query: 327 DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371
            +       E     K      D  Q    +   K    + + Q 
Sbjct: 360 KVKLNSLMTETPDNIKKLTQSADWDQNKNMQGNTKFKLANFKFQL 404


>gi|118594723|ref|ZP_01552070.1| probable transmembrane protein [Methylophilales bacterium HTCC2181]
 gi|118440501|gb|EAV47128.1| probable transmembrane protein [Methylophilales bacterium HTCC2181]
          Length = 1316

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/380 (8%), Positives = 97/380 (25%), Gaps = 29/380 (7%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           + V   L  + S +++ A     ++     + +E      +  +   + +   +      
Sbjct: 11  KVVFSSLFIVISAIIITALAFVFYLPSHLNEIKEKIVVSLSEKISYTVQID-DLSAEWNG 69

Query: 61  -FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             PS+   +I +  K+        + + +   +L L      +  + + +P +       
Sbjct: 70  INPSLILSNIAVFNKD-QVKSISTKKIIVDFSWLSLFKLRPVIDQITLLEPDVLLVKEPD 128

Query: 120 GVSNW------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQISA 171
           G  +        +          + L+ + +  G +  ID+  +    +  +++N    +
Sbjct: 129 GTFSINGITTNQKSVDDDLANWALNLDDLIISNGTLSWIDKTINASDVILFNNVNFHYGS 188

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
                        +  S+       F           N    +    L            
Sbjct: 189 SKALAFLGRRAFELTSSMP-----KFSKNPIRLSGFFNLLNYSDRDDLDGAASIYLQKFS 243

Query: 232 IDL-----FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
           + L            + +                +   L     R +    +S   +   
Sbjct: 244 LKLIQPWQKTISQIKQGEVSADLSIEFDAGNINDVGGLLKIDALRAT---TLSKQPINFD 300

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346
             +       +      K       +    F  N A     +++    +     +   +L
Sbjct: 301 ILQGAIDFKRNENILSFKLS-DLSLKQNAEFKVNKASLRLVMSDQMEVQSVSLNSARINL 359

Query: 347 KKDDIQYSVNKKEEKDNSHD 366
           +  DI  +     E  +   
Sbjct: 360 E--DISKAAEYLPEPFSEAK 377


>gi|30249307|ref|NP_841377.1| transmembrane protein [Nitrosomonas europaea ATCC 19718]
 gi|30180626|emb|CAD85239.1| possible transmembrane protein [Nitrosomonas europaea ATCC 19718]
          Length = 1290

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/266 (12%), Positives = 87/266 (32%), Gaps = 18/266 (6%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIE 84
             D   +R D     T + G+ + +   I+ +     P +  + + +  ++D        
Sbjct: 39  LPDIGKYRSDIAAAMTRVAGQPVRID-SIRANWDGLRPHLSMQGVSVSDRQD-EPVLVFP 96

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------QRKSTMDMIHNVI 138
            +     +  LL GE+   ++ ID+P L      KGV +         ++ +  +   + 
Sbjct: 97  EIEGTVSWRSLLRGELNFHEIIIDRPALVTRRDVKGVLHIAGVTLGENQQESGFLDWLLR 156

Query: 139 LEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNIISPLSIDSIK-----GSVIAE 192
             ++ ++   I   D+     V++   +NL +  +         + +         V   
Sbjct: 157 QRRLIIRQAVIYWQDELRRRPVHYFESVNLHLQNKRGGRRHQFGLQAHSSDPLFSRVDLR 216

Query: 193 GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL---FGNLFWNEKQPIYSG 249
           G    D+ ++          + + + L      +  P  + L    G++           
Sbjct: 217 GDVTGDSVQTLSAWQGRLFIQLQDVDLGSWQEWMTLPADLVLKKGKGSMRAWADIRAGIL 276

Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGN 275
              V+    +   + ++ +   L  +
Sbjct: 277 ARWVSDISLRSTAVHVARQLPVLEID 302


>gi|124265436|ref|YP_001019440.1| putative transmembrane protein [Methylibium petroleiphilum PM1]
 gi|124258211|gb|ABM93205.1| putative transmembrane protein [Methylibium petroleiphilum PM1]
          Length = 1472

 Score = 76.1 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 41/383 (10%), Positives = 100/383 (26%), Gaps = 42/383 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI---- 56
           R  L G+  + S+V+     +   I      +R D E + +  +G  + + G I++    
Sbjct: 61  RWGLAGVLLVSSIVIAAWLVLQWAILPRIEHWRPDMEMRVSHALGVPVRI-GAIEVTDGG 119

Query: 57  HILPFPS-VFFKDIRIDQKEDGS----FESKIEGLSMRAEFLPLL-----SGEIRVFDMY 106
            +  +   +  +D+ + +            ++  +        LL        +R   + 
Sbjct: 120 SVWRWARSIELRDVVLYEAPQQDIEPREALRLPSVRAVLSPSSLLPGWDGRWRLRFDQLR 179

Query: 107 IDQPHLNFYLSSKGVSNWF------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QV 159
           ++   L     ++G                         ++  ++GG +   D+      
Sbjct: 180 VEGARLEVRRDARGRILVAGLESSGPGDEGAATDWFFSQQEFVIQGGTLVWTDELRGAPP 239

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGS---VIAEGTGNFDNKRSAFKITANFPAKNKA 216
             L  ++L +          L               G           +      A+   
Sbjct: 240 LSLDAVDLVVRNGVRRHELRLDATPPAEWGERFSLRGHFTQPLLARPVEGQGGLLARPGD 299

Query: 217 IS-----LKIQL-FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270
                  L   L      P+   +      +           V         ++L+ +  
Sbjct: 300 WRRWVGTLYADLPSADIAPLRRQVDLPFDLSRGAGALRAWVEVKNAEPVAATVDLALRDV 359

Query: 271 RLSGNFKISDGNVRISRYKLQSI----LPNSSTDEDNKTKVS---QDEENLLNFSENGAE 323
            L          +   R   +      L ++      + +         + L++    A 
Sbjct: 360 VL--RLAADAEPLAFERIDGRLSGRPPLGDAGGARSGELQARQFGFVTADGLHWPAADAT 417

Query: 324 SMHDLNETDFFEEEEKKNKNDDL 346
               L+E       E + +  DL
Sbjct: 418 LRWRLDEAGALAGGELRAQRLDL 440


>gi|220918734|ref|YP_002494038.1| protein of unknown function DUF748 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956588|gb|ACL66972.1| protein of unknown function DUF748 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 955

 Score = 76.1 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/280 (11%), Positives = 79/280 (28%), Gaps = 29/280 (10%)

Query: 16  VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQK 74
           +L     +      +  R    +QA+  + + + +    ++ I P   SV  + +R+   
Sbjct: 24  LLCAYTALGFLAAPSLVRRVAVKQASAALHRPVEID---RVRINPLALSVTVEGLRVKHG 80

Query: 75  EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR------- 127
           +     +  + L +R   L LL+G++   ++ + +P L+  L ++G   +          
Sbjct: 81  DGA-PFAAWDSLYVRLAPLRLLAGDVGFAEIRLVRPALHVGLDARGALTFEDLLAGDPAA 139

Query: 128 -------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                           + + ++ V+  R+   D      +  +   L +           
Sbjct: 140 AKAGAPAAPAKQGGLGLSIRRLAVEEARVVFRDATRKPAFETTLGPLTVRLDSFRTRGGG 199

Query: 181 S-------IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL---KIQLFPLAYPI 230
                         +    GT      RS+  +        K       +  +      +
Sbjct: 200 DSPYSFTGTTESGETFRWTGTVRSAPLRSSGTLAFERIQLPKYAPYIHDQAPVDLAEGVL 259

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270
            ++    L W     +              L     A   
Sbjct: 260 DLETAYELAWGADARVLRTSGGKLTVERLALAPRGQADAP 299


>gi|224025145|ref|ZP_03643511.1| hypothetical protein BACCOPRO_01879 [Bacteroides coprophilus DSM
           18228]
 gi|224018381|gb|EEF76379.1| hypothetical protein BACCOPRO_01879 [Bacteroides coprophilus DSM
           18228]
          Length = 825

 Score = 76.1 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/344 (13%), Positives = 104/344 (30%), Gaps = 39/344 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------I 56
           ++ L   G    V+L+    +P       F+    +       K +  +   +      +
Sbjct: 6   KKTLKIAGITLGVILLLLLILPF-----AFQGKLAKLVKEEGNKMLNAQFDFRTLNISLL 60

Query: 57  HILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLN 113
              P  SV  +D  +            +   L+           G   +  + +    ++
Sbjct: 61  RNFPSASVSLEDFWLKGTGPFENDTLIQAGELTAAVNLFSFFGDGGYDISRIIVKDTRVH 120

Query: 114 FYLSSKGVSNWFQRKSTMD----------MIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
             +   G  NW   K + D              + L+K+ V    +   D++      LS
Sbjct: 121 AIVLEDGRPNWDVMKPSPDAETPEDETAQETFRIKLQKLSVDNLSVVYDDRQGGVFADLS 180

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
            L    S  F +  + + +     S+     G     + + +   +  A        ++ 
Sbjct: 181 RLEADCSGDFGSDRTVVDLKMETPSLTCRTGGIPLLNKVSLEADMDVDADLAGGKFTLRE 240

Query: 224 FPLAY-PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
             L    I ++L G L   ++        +      K L   + A  ++   + K +DG 
Sbjct: 241 NMLRLNAIQLNLDGWLAQTKQGMDMDLRLNTNEVGFKELLSLIPAIYAKDFQDLK-TDGK 299

Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
           V ++ +        +    +  TKV          + +  ++M 
Sbjct: 300 VTLNAF--------ARGSMEGNTKV-----PQFEVNLDVKDAMF 330


>gi|54293875|ref|YP_126290.1| hypothetical protein lpl0931 [Legionella pneumophila str. Lens]
 gi|53753707|emb|CAH15165.1| hypothetical protein lpl0931 [Legionella pneumophila str. Lens]
          Length = 513

 Score = 76.1 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 57/402 (14%), Positives = 130/402 (32%), Gaps = 31/402 (7%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +L ++L+    L   V +  + +   I     ++    + T I  K+  + G I   + P
Sbjct: 3   LLGKILLAFTALMIFVSITLWILATNIKPETIKQLVSNKITAITHKQSQIDGTISWQLFP 62

Query: 61  FPSVFFKDIRIDQKE-DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P + F  I I  +  + ++   I+ L +  +  PLL G     ++ ID   L     + 
Sbjct: 63  RPGLKFNKIHIGNENLNDNYSLLIDTLLLNLKITPLLKGHFVFSEINIDGLKLFINQENN 122

Query: 120 GVS-----NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF-----LSDLNLQI 169
                   N  Q  +T        ++K+ +  G+I + ++    V           NL+ 
Sbjct: 123 EKPLSSEKNANQYNTTTYPNEQFAIQKLLLSHGQIILNNKGRSTVLKNIQIGAEQFNLKN 182

Query: 170 SARFLNIISPLSIDS--IKGSVIAEGTGNFDNKRSAFK-ITANFPAKNKAISLKIQLFPL 226
           S   + I + L+  +            G      S    + +     +    L+IQ   L
Sbjct: 183 SPFSVQIKAKLTDAAFLQTAKANINFKGRVSLSPSIIDELNSGISKSSIEGQLQIQNILL 242

Query: 227 AYPIIIDLFGNLFWNEKQPIYS-GVFSV-AGDFSKLLNLELSAKKSRLSGNFK-ISDGNV 283
               I  +   +  +++   ++    S+  G+    ++  ++ ++  ++     +    +
Sbjct: 243 NQFAIKKINATVKTHKRDIQFNPLTLSLYNGESIGDMDYVIATQQLLINQTATNLDGKQL 302

Query: 284 RISRYKLQSILPNSSTDEDN--------------KTKVSQDEENLLNFSENGAESMHDLN 329
             S  K  +I  N                     K  ++  +  + N + +   +   + 
Sbjct: 303 ITSLLKHPAISGNLDYSIHASIPLKALSIESLVSKGTITLKDGEVYNINLDQLLNNLKVK 362

Query: 330 ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371
                 E     K      D  Q    +   K    + + Q 
Sbjct: 363 LNSLMTETPDNIKKLTQSADWDQNKNMQGNTKFKLANFKFQL 404


>gi|222112531|ref|YP_002554795.1| hypothetical protein Dtpsy_3368 [Acidovorax ebreus TPSY]
 gi|221731975|gb|ACM34795.1| conserved hypothetical protein [Acidovorax ebreus TPSY]
          Length = 1378

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 66/207 (31%), Gaps = 16/207 (7%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           R  L+ L   + ++      +  +I     DFR   E+QA   +G  + +          
Sbjct: 20  RWGLVALVTFWLLLAAAWGGLHGWIVPRIGDFRPQLEQQAQRALGVPVRIHSISARSEGL 79

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            PSV  KD+ +   +      ++  + +      LL        +YI+ P L+      G
Sbjct: 80  IPSVELKDVALLDAQG-REALRLPRVVVALSPRSLLRFG--FEQIYIEGPELDMRRERDG 136

Query: 121 VSNWF-------QRKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLNLQISAR 172
                           +          ++ ++GG ++  D++ S +   L++++L +   
Sbjct: 137 RIVIAGLAFRDSAEGDSAAADWLFSQAEVAIRGGTLRWTDEQRSAEPLALTEVSLVLRNS 196

Query: 173 FLNIISPLSIDSIK---GSVIAEGTGN 196
                  L               G   
Sbjct: 197 ARRHQVRLDATPPAEWGAPFTLRGQFR 223


>gi|16330183|ref|NP_440911.1| hypothetical protein sll1265 [Synechocystis sp. PCC 6803]
 gi|1652671|dbj|BAA17591.1| sll1265 [Synechocystis sp. PCC 6803]
          Length = 1978

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/333 (12%), Positives = 100/333 (30%), Gaps = 20/333 (6%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65
           LI LG L  V             + +     E + + ++G+ + +       +     V 
Sbjct: 26  LITLGGLTVVGTGLYLGGQHL-AYREASPFLESELSRLLGRPVDIGPVEDFRL---LGVR 81

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
                + +  D +    IE + +    LP L G+       I  P +N      G     
Sbjct: 82  LGASSLPRTVDDATAIAIEAIEIDVNPLPFLVGQPVEVRATIINPQVNLEQKPTGQWTTI 141

Query: 126 QRKSTMDMIH-NVILE-KIHVKGGRIKIIDQESDQVYFLSDL-----NLQISARFLNIIS 178
           +           + L   ++V+  +++++ Q   Q   ++         +       +  
Sbjct: 142 KLPEGDKPFSLPLDLTVGVNVQNAQLQLLPQGLQQPVQITAAGQGGYQYRRQGDRQTVSY 201

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL--KIQLFPLAYPIIIDLFG 236
            L + S+   + A+G    +   S   +T N        SL   + +      I   + G
Sbjct: 202 DLGVQSLGSDLQAQGQTVLNTGESQTNVTINRLDLPALASLLPPLPVALETGEISGQVRG 261

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS--GNFKISDGNVRISRYKLQSIL 294
           +L   ++        ++     K L   +   K+ L    +   +   ++I++  +    
Sbjct: 262 SLPSWQQWSALQ---TLGNVELKQLQARIDKVKAPLQVGLDLGFTGQKLQINQGLINLGP 318

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
            N+              +           +  D
Sbjct: 319 LNA--ALQGTIDWRSGYDLQFTTKAIDTAAFLD 349


>gi|299136240|ref|ZP_07029424.1| AsmA family protein [Acidobacterium sp. MP5ACTX8]
 gi|298602364|gb|EFI58518.1| AsmA family protein [Acidobacterium sp. MP5ACTX8]
          Length = 557

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 64/215 (29%), Gaps = 23/215 (10%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE--DGSFESKIEG 85
           +    R       +  +G+ + +   + +H+LP P     ++ + +          +   
Sbjct: 43  NVNRLRHRIATSMSESLGRPVHLD-SVTLHLLPMPGFTLNNLVVSEDPAFGSEPVIRANQ 101

Query: 86  LSMRAEFLPLLSGEIRVFDMYI-----DQPHLNFYLSSKGVSNWF-----------QRKS 129
           +  R  F  L   ++    +       + P LN   +++G  N                +
Sbjct: 102 VEARLRFSSLWRRQVEFSTIRFIESDGNHPSLNIVRNAQGRWNLEDILMQAAHANTAPTA 161

Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189
                       I     R+ I   E    + L+D +  +   +L+     S+       
Sbjct: 162 QRKAGSVPRFPYIEATSARVNIKLGEEKMPFSLTDTDFAL---WLSSPQQWSVRLQGTPA 218

Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
             +   +   +    + T    A+   + LK+   
Sbjct: 219 RTDTNASDTGE-MRLEGTLERAARFADVPLKLTAS 252


>gi|319796498|ref|YP_004158138.1| hypothetical protein Varpa_5875 [Variovorax paradoxus EPS]
 gi|315598961|gb|ADU40027.1| hypothetical protein Varpa_5875 [Variovorax paradoxus EPS]
          Length = 1393

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 81/290 (27%), Gaps = 28/290 (9%)

Query: 31  DFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89
           DFR   E QA+  +G  + + G I       FP+   +D+ +    D     ++  +   
Sbjct: 50  DFRGALEAQASKAIGVPVRI-GSITARPEGLFPAFELRDVVLQDA-DQREALRLVRVVAS 107

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV-------SNWFQRKSTMDMIHNVILEKI 142
                +         +YI+ P L+    ++G         +      T          ++
Sbjct: 108 VSPRSIWR--FSFEQLYIEGPQLDVRRDAQGKLHVAGLHMDTDTTGETRAADWFFAQREL 165

Query: 143 HVKGGRIKIIDQE-SDQVYFLSDLNLQISARFLNIISPLSIDSIKGS-VIAEGTGNFDNK 200
            ++GG ++  D++   +   L+D+              L      G        G F   
Sbjct: 166 VIEGGTVRWTDEQRQAEPLLLTDVRFVARNGGRRHGLRLDATPPAGWGQRFTLRGQFRQP 225

Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY-----SGVFSVAG 255
             + +         +  +    +        + L   +               G      
Sbjct: 226 LLSVRTGRWQTWDGQIYADLPYIDVTRLGQYVSLDARIREGNGAVRLWADVQDGQLVGGA 285

Query: 256 DFSKLLNLELSAKKS-------RLSGNFK--ISDGNVRISRYKLQSILPN 296
               L  ++ S  K         ++G     + D  +  S   LQ    +
Sbjct: 286 ADLGLDRVDASLGKGLQPLVLRSVTGRLAGHLKDDTLEFSTTALQFDTSD 335


>gi|149927211|ref|ZP_01915468.1| hypothetical protein LMED105_07213 [Limnobacter sp. MED105]
 gi|149824150|gb|EDM83371.1| hypothetical protein LMED105_07213 [Limnobacter sp. MED105]
          Length = 1348

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/361 (10%), Positives = 103/361 (28%), Gaps = 39/361 (10%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LPF 61
           +   L  +++ + +    +   +      +R + ++      G  I + G I+       
Sbjct: 26  LFWVLIAVYTPLCMALLAIKWLVLPEIDRYRPEIQQYLQTQTGTAIEI-GQIQASWRGFG 84

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P +  +++R+ Q          + L +      +L+   R+ ++ +  P L+   +S+GV
Sbjct: 85  PLLEVRNVRLQQANG-EPGFTADQLKLTWSLPSILAFNPRLKNLEVQSPALSVVRNSQGV 143

Query: 122 SNWFQRKSTMDMI-------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                     D           +  +++ +K G +   D                 A   
Sbjct: 144 IEVAGIPLVDDGSQGNPGLDWLLAQQRVLLKNGVLNWQDAMGQFP--------SAQAIET 195

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
            ++    +   +  +  +            ++    P   + +          +     L
Sbjct: 196 ELLLENGLSRHQAGLTFKLPV-LAQTPVNARLNFKTPLLERQL-----GDVSKWKGSFYL 249

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                  ++      VF   G    L   +         G  + S  + RI + +  +  
Sbjct: 250 S---ALVDQTAPLESVFKTFGLDVDLTQPQGKLWIDFEDGFVQRSLLDARIGKLRFSNPE 306

Query: 295 PNS-STDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353
            ++   D  N + +             G  ++ + N     + + +          D+  
Sbjct: 307 VDAPPFDMTNTSAL---------VEVQGQHALFEPNAISIRQLKGQIAGQKQFGPTDLSL 357

Query: 354 S 354
            
Sbjct: 358 K 358


>gi|163751486|ref|ZP_02158709.1| hypothetical protein KT99_14074 [Shewanella benthica KT99]
 gi|161328607|gb|EDP99757.1| hypothetical protein KT99_14074 [Shewanella benthica KT99]
          Length = 1017

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 52/411 (12%), Positives = 131/411 (31%), Gaps = 49/411 (11%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFK 67
           L  L ++ L+    + L + +   +    ++ + ++ + + ++    + I PF   V   
Sbjct: 22  LAILLTIYLIFTVLLGLLLPYVAHK-QLPQELSAMLKRPVMLE---DVSINPFTLKVSLT 77

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL---------- 116
             R+ +K++ +       LS   +F   +++  + V  + +D+P+               
Sbjct: 78  GFRVQEKDN-TNFIGFTKLSFELDFWRSIINQALSVDHVTLDKPYALLERLNEPDSFTFN 136

Query: 117 ---------SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
                    + +       +  T + + ++ ++ + +    +   D+ ++       ++L
Sbjct: 137 FSDIIHELVNREINETLDNQPETPNGLPHIKVKDLSIVNAELVYTDKVTNSRLHYPAMSL 196

Query: 168 QISARFLNIISPLSIDSIK-----------GSVIAEGTGNFD-----NKRSAFKITANFP 211
            + A         + +              G +  +G           +     I     
Sbjct: 197 HLKAFDTLKKIDSNGNRSNQFSIRFVGENGGEIATQGKLQLSPLNIIGELQLTAIQLPQF 256

Query: 212 AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY--SGVFSVAG-DFSKLLNLELSAK 268
               A  ++ +L    +            ++   +    G FS+    F    N  LS  
Sbjct: 257 WSFIADEVQARLESGQFSFNTHFEILAQADQALQLLTQDGQFSLENISFVDDQNPLLSLP 316

Query: 269 KSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
              L G +  ++D  V+++  + + +  N+S   +    VS      +  S         
Sbjct: 317 LLSLHGISLNLADKQVKVASVETEKLSLNASLTTEGLDIVSLFM--PVVTSAEAQSLKSA 374

Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378
             ET      EK  +  + K+ D  +S          +D    EN   D  
Sbjct: 375 QQETA-SSIREKTGQESEDKQADSAWSAIITSVTVKDYDLNLVENRLTDNT 424


>gi|326319367|ref|YP_004237039.1| hypothetical protein Acav_4592 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323376203|gb|ADX48472.1| Conserved hypothetical protein CHP02099 [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 1398

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/367 (11%), Positives = 96/367 (26%), Gaps = 34/367 (9%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDW-----TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
             LG L +  L+ A    +   W      ++R   E QAT  +G  + +           
Sbjct: 7   WSLGLLIAFWLLVAVAWGVLHGWIVPRIGEWRPALEAQATKALGVPVRIGALSARSEGLV 66

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P++   D+ +   +      ++  +         L   +    +YI++P L+    + G 
Sbjct: 67  PAIELTDVALLDPQG-REALRLPRVVAALSPRSALR--LGFEQLYIERPELDVRREADGQ 123

Query: 122 ---------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISA 171
                                       ++ ++GG ++  D         LSD+++ +  
Sbjct: 124 LVVGGIRLHGGAGSGDGGSAADWVFSQGEVALRGGTVRWTDAMRGAPPLELSDVDIVLRN 183

Query: 172 RFLNIISPLSIDSIKGS-VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
           R       L               G F          A      +  +   ++       
Sbjct: 184 RGWRHAMRLDATPPPAWGDRFTLMGRFRQPLLTTHGGAWRQWSGQLFAQFGRVDVSRLRQ 243

Query: 231 IIDLFG-NLFWNEKQPIYSGVFS------------VAGDFSKLLNLELSAKKSRLSGNF- 276
             D+ G ++                          +A   + L         + ++G   
Sbjct: 244 HADIEGIDVAQGRGALRAWLDVRRGEVAGGTADVALADVEATLGQGLEPLALASVAGRVG 303

Query: 277 -KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335
            +  +G    S   LQ +  +          + Q   +         E   D  +     
Sbjct: 304 GRWLEGGFEASTEGLQFLTRDGLRWPGGNVSIRQAGRDPRAPEREQGELRADRLDLAALA 363

Query: 336 EEEKKNK 342
           +   +  
Sbjct: 364 QVASRLP 370


>gi|90407761|ref|ZP_01215939.1| hypothetical membrane protein [Psychromonas sp. CNPT3]
 gi|90311121|gb|EAS39228.1| hypothetical membrane protein [Psychromonas sp. CNPT3]
          Length = 1076

 Score = 75.3 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/373 (12%), Positives = 102/373 (27%), Gaps = 24/373 (6%)

Query: 3   RRVLIGLGF-LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60
           +R  + +   LF    +       F+   D++E            K +V+  I   +   
Sbjct: 10  KRFSVLIAVKLFIFAALLTTARIFFVSVGDYKEQVASWLVEEYSVKFSVE-DISASVDFS 68

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
              V    +++   +   F  K++ L +   F   +    +    + +    L    +  
Sbjct: 69  GLVVTLNQLQLPNSKGLPFTLKLDHLFLHLNFWDSIFERRLNFNRISLQGADLTLKSNIS 128

Query: 120 GVSNWFQRKSTMDMIHNV---ILEKIHVKGGRIKIIDQES-DQVYFLSDLNLQISARFLN 175
                 +   T+  + N+    L++  +   R+   D     +  F+ +L    S +   
Sbjct: 129 DTDPADKPSLTVRTLENIFLNQLKRFSISNSRLHFYDHFGVKKTVFIEELRWVNSGKLHQ 188

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNK----RSAFKITANFPAKNKAISLKIQLFPLAYPII 231
            +              +   N   +        +      A N  I+  +         +
Sbjct: 189 GVGRAKTSDAPNEDALQFVLNLSGEVENTEKDLQGELYVAANNLNINNYLSGKIDPSATL 248

Query: 232 IDLFGNLFWNE---KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN--VRIS 286
           +D             + + S    +            +      SG  ++++     R  
Sbjct: 249 LDARIGFQAWLSFSDKRLESLQVRLRPSQLSWQQFSQTQDWQLNSGYLQLTNSRQGWRFD 308

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEEN-LLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
            Y +Q    N+    D+    S   +N  +     G           F+       K   
Sbjct: 309 SYDVQIKQNNN---ADSTLSFSGTGDNSNVAMQVKGVTL---AKALPFYLLFNPPAKEQA 362

Query: 346 LKKDDIQYSVNKK 358
           LK  DI    N  
Sbjct: 363 LKLKDIALDANLD 375


>gi|168699320|ref|ZP_02731597.1| hypothetical protein GobsU_07362 [Gemmata obscuriglobus UQM 2246]
          Length = 1126

 Score = 75.3 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/354 (11%), Positives = 96/354 (27%), Gaps = 20/354 (5%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVG-KKIAVKGGIKIHILPFPSVF 65
           + L  + ++V +G       I     RE         +    + V G  ++ IL   +V 
Sbjct: 11  LILAGVAALVALGWVANSW-ISPDRVREKVIATLADQLDDVDVQV-GSARLRILGGIAVT 68

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
              +             +    +  +   L  G + +  + ++ P +    ++ G  N  
Sbjct: 69  DLRLTRRGDPPDQPFLAVPSAVLFHDKEQLNHGRLVIKKVQLENPTIRIERAADGKWNVA 128

Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESD----QVYFLSDLNLQISARFLNIISPLS 181
             +       +  +    VKG  + + D   D      +      LQ        +    
Sbjct: 129 --EVVRSGPADKPVPTFEVKGATVVVTDHAPDGLPATTFTGVQGTLQNDPLPTLTVQGSG 186

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITA-----NFPAKNKAISLKIQLFPLAYPIIIDLFG 236
                G V   G  N  N   A  +          A + A     +L P    +      
Sbjct: 187 TAKPFGQVKVSGRLNRINSHLALTLKLPEFPVGPTAVSAARRFAPELAPHLAKLTAVANV 246

Query: 237 NLFW---NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
                   E  P +     +    +K  + +L      ++   + +DG V++        
Sbjct: 247 TAEVTYAPEGAPNWRHDVRLDVKDAKFEHPDLPKVLENITATVRSTDGRVKVDEATATLG 306

Query: 294 LPNSSTDEDNKTKVS---QDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344
                   + + +       ++ L  F +        +      +    +  + 
Sbjct: 307 DAKLRVALETRPEAPPAVPGDDPLKRFEDRLQRLDLAVTGVPLDDALFNRLPDK 360


>gi|90419926|ref|ZP_01227835.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335967|gb|EAS49715.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 622

 Score = 75.3 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/335 (11%), Positives = 97/335 (28%), Gaps = 53/335 (15%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGL 86
           ID    R+D   +   + G+ + V+G +   +LP   +  + +RI           I+ +
Sbjct: 50  IDTEAARDDLVARLQTMTGETVTVEGDVTFSLLPRTRLVARHVRIGTAN----AFTIDTV 105

Query: 87  SMRAEFLPLLSGEIRVFDMYIDQPHLN---------------FYLSSKGVSNWFQRKSTM 131
               + +  L G   +  + + +P                     ++ G++   Q     
Sbjct: 106 VADLDAVDALIGTASIARVVLVRPEWRPLPETEPSSRTAEPVLVPAANGMAAPHQGSPLD 165

Query: 132 DMIHNV--------ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                V         LE + ++ G      +  D    +S+ NL ++             
Sbjct: 166 GPRRLVRTLLERFHDLETLEIRSG--VYRPRAGDSRAGISNANLIVAQ-----------A 212

Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI-SLKIQLFPLAYPIIIDLFGNLFWNE 242
           S   ++   G+  ++ + S   +    P    +    ++++   + P+     G     +
Sbjct: 213 SSTAAIYVSGSFIWNGQPSELDLRLAAPRALLSGDPSEVRIALSSPPLTASFDGEATL-D 271

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRISRYKLQSIL 294
           +    SG   +           L   +          L G   ++     +   ++    
Sbjct: 272 RNATISGALRIDAPSLSRSIEWLGESRPDTPDIGPVALDGTLLLAGSRANLQDTRITIAG 331

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
                  + +      ++  +  +        D  
Sbjct: 332 SRGQGVMEAEF---GGDKPRVRGTLAFQTLDFDPF 363


>gi|332305193|ref|YP_004433044.1| hypothetical protein Glaag_0813 [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172522|gb|AEE21776.1| hypothetical protein Glaag_0813 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 1062

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/388 (9%), Positives = 119/388 (30%), Gaps = 39/388 (10%)

Query: 13  FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71
           F +  +    +   +     +       +   G+ ++++   KI I PF       + +I
Sbjct: 23  FIITYLIYALIVGVVTPLILQSQLPSVLSDKTGRSVSIE---KIRINPFLLRASVANFQI 79

Query: 72  DQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG---VSNWFQ- 126
           +++   +    +  L +   F   +      +  + +  P+++      G     N+   
Sbjct: 80  NEQSSQAKFVHVNRLELDIGFWQSVFQFTPTIEHIDLVAPYVHLSRLEGGEATRFNFTDI 139

Query: 127 -------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
                         +     I ++ +    +  G++ + D+ S       +L  +++   
Sbjct: 140 IDTFSQSASEPTKPEEESAGIPHIRIGHFRLSQGQVLLSDKVSGTDIDYPELAFELNDLD 199

Query: 174 LNIISPLSIDSIKGSVIAE------GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
                    +                T          +          ++ L        
Sbjct: 200 TQTTLAEISEDKTTPKTKNHYVFKLVTAEGGTAALNGQFQLAPFEIKGSVGLANIALAPL 259

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSV----AGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
           +P+  +L       +    +   +S+    +G   +  N +LS  +  ++ + K     +
Sbjct: 260 WPLSNEL-LEAKLTDGLLNFHIDYSLFEEPSGVRVRAANGQLSLSQLSIADSHK---PRI 315

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLN--FSENGAESMHDLNETDFFEEEEKKN 341
            ++  ++  +  ++ + + N   +    +  L+  FS NG + +  L      +  +  +
Sbjct: 316 TLALMQINDMSLDTKSKQVNINDIQL-NKPWLDGVFSPNGLDLVSLLTPKPAQKTVDSSS 374

Query: 342 KNDDLKKDDIQYSVNKKEEKDNSHDKEN 369
           +N        + +  +      +   ++
Sbjct: 375 QNPSTTSTTPKDTAEETALSQQAVSTQS 402


>gi|319764894|ref|YP_004128831.1| hypothetical protein Alide_4242 [Alicycliphilus denitrificans BC]
 gi|317119455|gb|ADV01944.1| hypothetical protein Alide_4242 [Alicycliphilus denitrificans BC]
          Length = 1356

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 68/252 (26%), Gaps = 13/252 (5%)

Query: 31  DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
           DFR   E QA   +G  + +          FP+V    + +   +      ++  + +  
Sbjct: 50  DFRPQLEAQAQRALGVPVRIAAVSARSEGFFPAVELSGVALLDPQG-REALRLPRVVVAL 108

Query: 91  EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK-------STMDMIHNVILEKIH 143
               LL   +    +YI+ P L+      G                +          ++ 
Sbjct: 109 SPRSLLR--LGFEQIYIEGPELDIRREQDGRIFIAGLSFRDTGETDSAAADWLFAQPEVA 166

Query: 144 VKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSIKGS-VIAEGTGNFDNKR 201
           ++GG ++  D     +   L+ ++L +    L     L               G F    
Sbjct: 167 IRGGTLRWSDALRGAEPLALTQVDLVLRNGALRHGIRLDATPPPDWGERFTLRGQFRQPL 226

Query: 202 SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261
                        +  +   Q+         DL G L   + +        V        
Sbjct: 227 LTTHGGNWQRWSGQMYAYFAQVDVSRLNRHADL-GTLQVRQGRGALRAWVDVQQGRVVGG 285

Query: 262 NLELSAKKSRLS 273
             +++      +
Sbjct: 286 AADMALGAVDAT 297


>gi|88706560|ref|ZP_01104264.1| secreted protein [Congregibacter litoralis KT71]
 gi|88699272|gb|EAQ96387.1| secreted protein [Congregibacter litoralis KT71]
          Length = 1141

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/262 (11%), Positives = 88/262 (33%), Gaps = 26/262 (9%)

Query: 36  FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFL 93
            E +A+  + +KI++K   ++ +     +   ++ +   +         +  L    +F 
Sbjct: 38  IESRASEFLNRKISLKKAPQLRLSDGLHIALAEVALADADWAGEGPMLTVNALKAEIDFW 97

Query: 94  PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF---------QRKSTMDMIHNVILEKIHV 144
            L   +I V  ++ID  +L+ +    G SN             K     +  V+LE + +
Sbjct: 98  SLFDEQILVNQLHIDGLNLHLHRDRDGRSNIPGLDRDQKNTTTKEPPSGLLPVLLEHMTI 157

Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204
           +  +++  +++S +   L   +L                  +  +   G G+  +     
Sbjct: 158 RNVQVRQSNEQSGKSLNLRVDSLT------------QDSHEEEGLRLRGQGSLQDYPWQL 205

Query: 205 KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE--KQPIYSGVFSVAGDFSKLLN 262
            + ++    +    + +          ++L GN    +  +    S    ++G     + 
Sbjct: 206 AVDSS-DLMSLRTGIDMSADVKGSLGDLNLEGNYQLPDLTELQNLSLTAILSGPMPPRVA 264

Query: 263 LELSAKKSRLSGNFKISDGNVR 284
                 +++      +   +V 
Sbjct: 265 ELSPILEAQAPTKISLEVRDVT 286


>gi|170743921|ref|YP_001772576.1| AsmA family protein [Methylobacterium sp. 4-46]
 gi|168198195|gb|ACA20142.1| AsmA family protein [Methylobacterium sp. 4-46]
          Length = 580

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 63/368 (17%), Positives = 106/368 (28%), Gaps = 36/368 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R +L+  G   +V L  A      +          R      G      G   + +LP P
Sbjct: 4   RSILVLSGGACAVALAVAACQSWTVATPPAVAFVGRHLARAYGLGFEADGPTSLALLPAP 63

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            + F+ +R+         ++   L M+     LL G+     + +    L    +    +
Sbjct: 64  RLTFRGVRLRN--GERLLAETSSLDMQLGLGGLLIGQAEAAAVTLTGARLILPDADDRWA 121

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
             F R +         L ++ + GGRI   +   D+   LSD+ L  S            
Sbjct: 122 APFARLTARLAAGARPLRRLSLSGGRIAAGETGPDR---LSDVTLSASWPRAGAG----- 173

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAK---NKAISLKIQLFPLAYPIIIDLFGNLF 239
                 +   G   +    +   + A  P       A  L+  L   +    +DL G   
Sbjct: 174 ------LDLTGRFAWRGVPTTVALAAARPLDLARGGASPLRAALAWPSG--SLDLDGTGR 225

Query: 240 WNEKQPIYSGVFSVAGDFSKL--------LNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
           W E  P  +G    + D              L     +  L G  +   G V +    L 
Sbjct: 226 WQEG-PALTGEGRFSTDALPEVLGWLGCRAPLSPLLGRVSLEGRVEARPGEVAMPALHLV 284

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL--NETDFFEEEEKKNKNDDLKKD 349
                + +  D     S   +  L  S   A    DL    +    E             
Sbjct: 285 L----AGSAFDGAGAASLGPDGRLALSGTLAAERLDLPGLPSGIGAEALFALARWTEGDL 340

Query: 350 DIQYSVNK 357
           D++ S   
Sbjct: 341 DLRLSAAA 348


>gi|153003727|ref|YP_001378052.1| hypothetical protein Anae109_0857 [Anaeromyxobacter sp. Fw109-5]
 gi|152027300|gb|ABS25068.1| protein of unknown function DUF748 [Anaeromyxobacter sp. Fw109-5]
          Length = 968

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/296 (10%), Positives = 86/296 (29%), Gaps = 31/296 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-F 61
           +R L+ +      +      +         R    ++ +  + + + V    K+ + P  
Sbjct: 23  KRRLVRVAVTLLALFAVYTALGFLAAPALLRRVLVKEGSAALHRDVTVA---KVRVNPLA 79

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+  + + +  ++     +  E L +R     L+ GE+ + ++ + +P L+  L++ G 
Sbjct: 80  LSLTIEGLAVKHRDGA-PFAGWESLYVRLAPHRLVLGELGLAEIRLVRPSLHVGLAADGA 138

Query: 122 SNWFQR-------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-------VYF 161
             +                         V + ++ V+   +   D               
Sbjct: 139 LTFQDLLEPEGQPAAAPPPPGEAQGGPRVSIGRLAVEEASVTFRDATRRPAFDTLLGPLT 198

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL-- 219
           +   + +      +  +         +    GT   +  RSA  +        K      
Sbjct: 199 VRLESFRTRGGGDSPYAFAGTTESGETFRWTGTVRTEPLRSAGTLAFEGIQLPKYAPYLQ 258

Query: 220 -KIQLFPLAYPIIIDLFGNLFWNEKQPIYS---GVFSVAGDFSKLLNLELSAKKSR 271
            ++        +  +    L W   + + +   G  +V         +   A K  
Sbjct: 259 DQLPADLHDGRLDFETRYELEWGAARRVLALAGGRLTVDRLAMGPRGVPDPAVKLS 314


>gi|296535680|ref|ZP_06897855.1| AsmA protein [Roseomonas cervicalis ATCC 49957]
 gi|296264004|gb|EFH10454.1| AsmA protein [Roseomonas cervicalis ATCC 49957]
          Length = 149

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 2/121 (1%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65
           LI LG   ++   G   + L +     R           G+ + + G + I +   P+V 
Sbjct: 13  LIVLGVAIALPAAGWVGLNLLLRDEVLRPRLIAAVEQATGRALTLSGPVGIKLSLVPTVT 72

Query: 66  FKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
            + + +     G          +      LPLL   +    + + +P L   L ++G  N
Sbjct: 73  LQGVALANAPGGSRPQMLTARRVEAELALLPLLRRRLAFERVTLIEPDLLLELDAEGTPN 132

Query: 124 W 124
           W
Sbjct: 133 W 133


>gi|114706958|ref|ZP_01439857.1| asmA protein, assembly of outermembrane proteins [Fulvimarina
           pelagi HTCC2506]
 gi|114537508|gb|EAU40633.1| asmA protein, assembly of outermembrane proteins [Fulvimarina
           pelagi HTCC2506]
          Length = 606

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/387 (10%), Positives = 103/387 (26%), Gaps = 45/387 (11%)

Query: 15  VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74
           ++++        +     R +   +   + G  + + G I   +LP   +    I I   
Sbjct: 2   LIVIVTVMPGFVLASDGARSELVAKMEALTGTPVEISGPISFSVLPRTRLVADRISIGSG 61

Query: 75  EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH-------LNFYLSSKGVSNWFQR 127
            D      I+ +    + +  L G   +  + + +P                G +     
Sbjct: 62  VD----ITIDRIVADFDPVDALFGRATIARIVLVRPEHQPEIIVAEGEADEIGTTVLTVA 117

Query: 128 KSTMDMIHNVILEKIHVKG----GRIKIIDQESDQVYFLSD------LNLQISARFLNII 177
                 +         + G     R  I   +  Q+  + +      L+        N  
Sbjct: 118 SDISASVERDRNAAQMIAGLEDLARRAIDRLDQLQILEIRNGVWRPGLDEAGPTGISNAN 177

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN-KAISLKIQLFPLAYPIIIDLFG 236
             ++  S + +    G   ++ + +   +  +  A      +  + L   + P+ +D  G
Sbjct: 178 LTITRSSSQSAFRMTGGFTWNGQPADIDMRVDSTANLRNGGTSNVSLSFSSPPLTLDFEG 237

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELS--------AKKSRLSGNFKISDGNVRISRY 288
            + +    P   G F   GD        L+             L+G+  ++   + ++  
Sbjct: 238 IMDF-GTLPRLVGRFEGRGDSFATTAAWLANSDYRIPQLGPVSLNGDLTLAGRTLEVTNA 296

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND--DL 346
           +L+              + S       +   +  +        D     E          
Sbjct: 297 ELRL------------AQSSGVGALEYDLDADRLDGTLAFETLDLTPVAEAIVPMPAGPF 344

Query: 347 KKDDIQYSVNKKEEKDNSHDKENQENF 373
                  +   +          NQ  F
Sbjct: 345 GFARPIEAEFARSAHLALRVSANQARF 371


>gi|330827098|ref|YP_004390401.1| hypothetical protein Alide2_4582 [Alicycliphilus denitrificans
           K601]
 gi|329312470|gb|AEB86885.1| Conserved hypothetical protein CHP02099 [Alicycliphilus
           denitrificans K601]
          Length = 1362

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 68/252 (26%), Gaps = 13/252 (5%)

Query: 31  DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
           DFR   E QA   +G  + +          FP+V    + +   +      ++  + +  
Sbjct: 50  DFRPQLEAQAQRALGVPVRIAAVSARSEGFFPAVELSGVALLDPQG-REALRLPRVVVAL 108

Query: 91  EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK-------STMDMIHNVILEKIH 143
               LL   +    +YI+ P L+      G                +          ++ 
Sbjct: 109 SPRSLLR--LGFEQIYIEGPELDIRREQDGRIFIAGLSFRDTGETDSAAADWLFAQPEVA 166

Query: 144 VKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSIKGS-VIAEGTGNFDNKR 201
           ++GG ++  D     +   L+ ++L +    L     L               G F    
Sbjct: 167 IRGGTLRWSDALRGAEPLALTQVDLVLRNGALRHGIRLDATPPPDWGERFTLRGQFRQPL 226

Query: 202 SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261
                        +  +   Q+         DL G L   + +        V        
Sbjct: 227 LTTHGGNWQRWSGQMYAYFAQVDVSRLNRHADL-GTLQVRQGRGALRAWVDVQQGRVVGG 285

Query: 262 NLELSAKKSRLS 273
             +++      +
Sbjct: 286 AADMALGAVDAT 297


>gi|327403187|ref|YP_004344025.1| AsmA family protein [Fluviicola taffensis DSM 16823]
 gi|327318695|gb|AEA43187.1| AsmA family protein [Fluviicola taffensis DSM 16823]
          Length = 968

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/250 (10%), Positives = 73/250 (29%), Gaps = 18/250 (7%)

Query: 29  WTDFREDFERQATLIVGKKIAVKGGIKIHI---LPFPSVFFKDIRIDQKEDGS--FESKI 83
             + +E   ++ +  +   + ++    +      P  ++   D ++  + +      + I
Sbjct: 41  KDEIKELVLKEVSKSLKADVTIE-DFDLTFLSTFPNVTIQLYDTKVTGRTEFKGVELANI 99

Query: 84  EGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMI 134
           + +        ++ G EI + +++I     +  +   G +N+                  
Sbjct: 100 KTIEAHVGLWDVIGGDEIEIDEVHISDAKFDVRVDPAGKANYDIVIPEDEKPVADQGPSK 159

Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
             + L++  +   ++   DQ SD    + +LN          I      +    V  E  
Sbjct: 160 FKMSLKEYSLNNIQLVFDDQASDMYANIKNLNHTGEGDLTADIIDFETSTKIDEVTLEMD 219

Query: 195 G--NFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVF 251
           G       ++   +      K       ++    A     + L G     +         
Sbjct: 220 GLSYLSKVKTDADVNLLMEFKEDDSKFTLKDNSFALNNFHMSLDGFYQMLKDHSQMDLKL 279

Query: 252 SVAGDFSKLL 261
           +      K L
Sbjct: 280 NTKEISFKDL 289


>gi|294788826|ref|ZP_06754067.1| putative AsmA family protein [Simonsiella muelleri ATCC 29453]
 gi|294483308|gb|EFG30994.1| putative AsmA family protein [Simonsiella muelleri ATCC 29453]
          Length = 705

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/348 (9%), Positives = 97/348 (27%), Gaps = 20/348 (5%)

Query: 3   RRVL---IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           RR     + L  + ++ L GA+     +   +  +           +KI     ++  + 
Sbjct: 10  RRWFKNTLILSVVTAIGLGGAYATFYHLSSFERLQRLSTDVMQGSTRKITFDAQMERQLF 69

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           P P+V  K++ + + +  +    I+ +S+   +  +  G+  +  + ++           
Sbjct: 70  PRPTVVLKNVMLSETDGRTPAMNIKQVSVGVAWTSVF-GDWAIDKLVLNDLATVITRDDN 128

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           G  N+       +    V   +I++  G++ +  Q   +   L+ ++     +       
Sbjct: 129 GSWNFADLFKQQNQ--KVKFNRININNGQVML--QAFGKRVELNQIHYNQIRQSDGKSPY 184

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
           +   +       E   N                 +  + L+             L   + 
Sbjct: 185 IFTANAMNPFWNELQLNVQGH----VAQTPEGIISPDMILQFTGHETGGAFSGSLVSKVG 240

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
               Q        +        + +++        +    + ++ ++          +  
Sbjct: 241 LKNNQFTSDDNKLIIRTDRLTGHADINI------AHIGSENDHLLLNNINSVFTGSLNDY 294

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347
             +      Q + +         E   +L       +    N N    
Sbjct: 295 RLNGTLTSRQAKLDP--AQLASDEITVNLTAKTATSDNLNVNLNAPAT 340


>gi|238026291|ref|YP_002910522.1| hypothetical protein bglu_1g06250 [Burkholderia glumae BGR1]
 gi|237875485|gb|ACR27818.1| Hypothetical protein bglu_1g06250 [Burkholderia glumae BGR1]
          Length = 1405

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 98/324 (30%), Gaps = 35/324 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           R VLIG   ++ V       +   +       R   E   +  +  ++ + G +  H   
Sbjct: 29  RVVLIGGATIYFVAASSYLGLRYVLLPQVDRLRPRIESFVSDKLHAEVRI-GRLAPHWSG 87

Query: 61  -FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             P V    + I  ++DG+    I   +    +  LLS    +  + +D P L    +  
Sbjct: 88  MQPGVDVTALTI--RKDGTTALTIPHATAAIAWGSLLSLAPTLSSLVVDAPDLLIERNRD 145

Query: 120 GV--------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLNLQIS 170
           G             +  +       +  + I ++GG ++  D + +     L+ + L + 
Sbjct: 146 GTLMVAGVAVPTTRRSGNDAFSTWLLRQQAIVLRGGTLRWRDAQRNAPELTLTGIRLAVL 205

Query: 171 ARFLNIISPLSIDSIKGSVI--AEGTGNFDNKRSAFKIT----------ANFPAKNKAIS 218
              L     L   +         +    F ++  A              +  P     ++
Sbjct: 206 NDGLVHRLALQAPANGTLFAGPLDFRARFTHRPLAAIGRPANWTGEAYLSTGPVDLPTLA 265

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKSRLSG 274
             + +   AY   +D    L + + +        ++G    L        L    +    
Sbjct: 266 RYLPVPLTAYAGRLDNTIWLGFQDGRLR-DAHGMLSGADVALRVRPTQPRLDIPTASFGW 324

Query: 275 NFKISDG---NVRISRYKLQSILP 295
           N  +  G    + ++    +   P
Sbjct: 325 NLALDPGHDYTLNLTDLHAELGQP 348


>gi|121596302|ref|YP_988198.1| hypothetical protein Ajs_4018 [Acidovorax sp. JS42]
 gi|120608382|gb|ABM44122.1| conserved hypothetical protein [Acidovorax sp. JS42]
          Length = 1418

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 65/207 (31%), Gaps = 16/207 (7%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           R  L+ L   + ++      +  +I     DFR   E+QA   +G  + +          
Sbjct: 20  RWGLVALVTFWLLLAAAWGGLHGWIVPRIGDFRPQLEQQAQRALGVPVRIHSISARSEGL 79

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            PSV  KD+ +   +      ++  + +      LL        +YI+ P L+      G
Sbjct: 80  IPSVELKDVALLDAQG-REALRLPRVVVALSPRSLLRFG--FEQIYIEGPELDMRRERDG 136

Query: 121 VSNWF-------QRKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLNLQISAR 172
                           +          ++ ++ G ++  D++ S +   L+++++ +   
Sbjct: 137 RIVIAGLAFRDSAEGDSAAADWLFSQAEVAIRAGTLRWTDEQRSAEPLALTEVSVVLRNS 196

Query: 173 FLNIISPLSIDSIK---GSVIAEGTGN 196
                  L               G   
Sbjct: 197 ARRHQVRLDATPPAEWGAPFTLRGQFR 223


>gi|162449377|ref|YP_001611744.1| hypothetical protein sce1107 [Sorangium cellulosum 'So ce 56']
 gi|161159959|emb|CAN91264.1| hypothetical protein sce1107 [Sorangium cellulosum 'So ce 56']
          Length = 1493

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/392 (12%), Positives = 107/392 (27%), Gaps = 66/392 (16%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP-SVFF 66
            L  +F+++      +   +     R    R+   ++ +++ +     + +  +P  V  
Sbjct: 24  VLCAVFALIGAIPLALGFLVRTETVRAWAARETAALLQRELGITARYDVRVQAWPLMVGL 83

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126
             + +D  + G+   ++E +++R     LL+G I   D+ I  P +   L    + N   
Sbjct: 84  NRLVVDSSDGGAPFLELERVAIRPRLFSLLAGHIDAGDVEIIGPRVRAVLKDGELRNLTL 143

Query: 127 RKSTMDMIHNVI---LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS----- 178
             +       +    L  + +   R+ +            D+++         I+     
Sbjct: 144 PSTGGGGGGGLDRAPLSSVAITDARVDLTIDNVRVQATEVDVDVSAEPSDAFEIAMRSGL 203

Query: 179 --------------------------------PLSIDSIKGSVIAEGTGNFDNKRSAFKI 206
                                                ++   +I EG  +FD        
Sbjct: 204 VSVVRTHPAPGHEAEEDSVDEDVVCRFDTRVRVEPGRALVRRLILEGAADFDPDPGTAPP 263

Query: 207 TANFPAKNKAISLKIQL-----FPLAYPIIIDLFGNLFWNEK-------QPIYSGVFSVA 254
            A      + + L++            P  I+                  P  SG  S+ 
Sbjct: 264 CALQDGDWRRVELELGALRAVGLGDGMPHRIEGRVRARLPVPIVHRFVNLPPASGSVSLD 323

Query: 255 -GDFSKLLNLELSAKKSRLSGNFKIS----DGNVRISRYKLQSILPNSSTDE-------- 301
                   +  L     R+ G   +     DG V ++R   +      +           
Sbjct: 324 VDAEYDAASAPLGLSLPRVKGTLLLDRPGLDGRVFVTRLAGKVSTTPDAVQLSDADVAWA 383

Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
           D   K+S  E               DL   + 
Sbjct: 384 DGTLKISSAEIKPFEKGVPLQAGPIDLANVEL 415


>gi|91793393|ref|YP_563044.1| hypothetical protein Sden_2039 [Shewanella denitrificans OS217]
 gi|91715395|gb|ABE55321.1| protein of unknown function DUF748 [Shewanella denitrificans OS217]
          Length = 1061

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/329 (13%), Positives = 111/329 (33%), Gaps = 29/329 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           +  ++ +    + V +    +P F       E   +  +  +G+++ +   IK+      
Sbjct: 20  KASMLTIVSYAAFVALLGLALPFF-----AHEHLPKWLSQQLGREVQID-VIKLDPF-EL 72

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGV 121
           SV    I+I + +  +    ++ LS    F   +  G +R+  + I QP ++    +   
Sbjct: 73  SVEIAAIKIKEADGNTDFFNLQSLSADFAFWDSIKHGGLRLNSVEITQPSVSVARYANEK 132

Query: 122 SNWF----------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
            N                   + ++     +  +E + +  G   + D  S      +D+
Sbjct: 133 LNISDIVHRLQQLTANDATKPKDASPAKPLSFAIETLALTQGHFTLDDMSSGLQLNYADI 192

Query: 166 NLQISARFLNIIS--PLSIDSIKGSVIAEGTGNFDNK-RSAFKITANFPAKNKAISLKIQ 222
            +++       +     S             G+ +++ ++              +++   
Sbjct: 193 TIRLDNVDSQGLLAKTTSPQEQANLYDIHLKGDANSEFKTNGAFQLVPFKLQGELNVDA- 251

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GNFKISDG 281
           L    Y   +D    +   + Q    G ++++        L    K+ +LS    +I D 
Sbjct: 252 LPLAQYWHAVDKLFKVKLEQGQLNVKGHYALSLSKDPQAALTWRVKQGKLSVNQLQIDDK 311

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQD 310
             + S   L +++  +      + K+S D
Sbjct: 312 QQKKSILSLNALVLENIRASSQERKLSID 340


>gi|220905440|ref|YP_002480752.1| AsmA family protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869739|gb|ACL50074.1| AsmA family protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 695

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 59/371 (15%), Positives = 117/371 (31%), Gaps = 55/371 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R L+    +    +     +   +D                GK +  +   KI   P 
Sbjct: 1   MKRFLLWTMGIVLAAVAVLAVMLGRMDTDFVIRQIADATAGATGKPLVFESSPKISFFP- 59

Query: 62  PSVFFKDIRIDQKEDGSFES-KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK- 119
           P V F   R  Q E     +  ++G     EF+PLLSG + + ++ +D P +    +++ 
Sbjct: 60  PGVSFGQARWGQAEQDDSLAVSVKGGMAELEFMPLLSGNVVLREVRLDNPTVTVRQNAQV 119

Query: 120 -----------------------GVSNWFQRKSTMDM------IHNVILEKIHVKGGRIK 150
                                     N    KS             V L+++ ++ G + 
Sbjct: 120 IKNGKQPTDAAAAEKNAAADNGSARENTSPAKSVKPDAAPRDAAPPVELKRLVIRQGSLN 179

Query: 151 IIDQESDQVYFLSDLNLQISARFLNIISPLSIDS-------------IKGSVIAEGTGNF 197
           I D +  Q   +SDLN+          +    D              I G++       +
Sbjct: 180 ITDTQ-GQDIKISDLNISAENLRPEQETTARCDFTIALGDAPGTPGHISGNLALSAKLRY 238

Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257
                  +  +          L   L   A P+ +++ G+L  N  +      +      
Sbjct: 239 APPMLTLRQASLTFN-----PLSGPLPKEAGPLQLNIEGSLDLNIMRMRVDKGWLATPQA 293

Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN---KTKVSQDEENL 314
              +  E +      +GN +I     +++     ++ P +    D    K +++    N 
Sbjct: 294 RLGIQGEAAFSPPAFTGNAEIDGSPRKLAAMAGLNLKPVAQGVTDGLNLKARLAYGN-NS 352

Query: 315 LNFSENGAESM 325
           LN S+  A   
Sbjct: 353 LNLSDIHARVD 363


>gi|159903603|ref|YP_001550947.1| hypothetical protein P9211_10621 [Prochlorococcus marinus str. MIT
           9211]
 gi|159888779|gb|ABX08993.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
           9211]
          Length = 1326

 Score = 74.5 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/356 (12%), Positives = 111/356 (31%), Gaps = 16/356 (4%)

Query: 15  VVLVGAFTVPLFIDW------TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68
           ++ +G      FID         +    E+Q +  +G  + +     +       +    
Sbjct: 19  LIFLGGSFSYYFIDKALDKFVDTYASKIEKQLSSQLGHPLEIGSYNGLRPW---GIAIGP 75

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128
            ++         +   G++++   L  L     V      Q  LN   +++    W    
Sbjct: 76  SKVLVGLKDKSSASASGVTIQLAPLASLINRRPVAIFTPKQTKLNLKANNENSY-WVFGN 134

Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188
           S    + N+ L     +  +I + DQ S ++   +        ++L       +    G+
Sbjct: 135 SISKRVPNIDLVVRLREPAKISL-DQYSLEIDAKTQATFNPRKKYLKGRFFFDL-GENGA 192

Query: 189 VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248
           +   G  N++         A          + +    L+   ++D   +L  +++     
Sbjct: 193 LQLSGNSNWERFTFQGDARAKRIRLKSLQDIFLNKLNLSTQGVVDGNFSLSLDKESVSCK 252

Query: 249 GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308
           G   V     K  N E S      S     S   +++S  + +    ++S     K  + 
Sbjct: 253 GRLKVGDVRIKHPNYENSFLSDLTS--INCSHRGIQLSSKEWKYGPMSAS--VKGKLPIK 308

Query: 309 QDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364
           +  +N    S   + S  + ++            ++ +   ++   +N      N 
Sbjct: 309 KPPDNSFAISSIISLSKDNDSQVKLDASVPISFDSNGIGIGELAAQINTDSFNLNL 364


>gi|24216931|ref|NP_714412.1| hypothetical protein LA_4232 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|24198320|gb|AAN51430.1| hypothetical protein LA_4232 [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 693

 Score = 74.5 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/343 (13%), Positives = 105/343 (30%), Gaps = 46/343 (13%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS 78
               VPL I    +++          G ++ V G   + + PFP +  K+++I  +++  
Sbjct: 40  SFTLVPLLIREDFYKDFILTAIEQKTGLEVKV-GSSDLVLFPFPGIELKEVQI--RKEEL 96

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------------- 124
                + + +   +  LL  ++ + D+YI    +N + +  G  +               
Sbjct: 97  VIGISDRIKVDISWFGLLGQKVEIRDVYISGGKINLHKNKDGSVDLIEFFQQDTEDSENS 156

Query: 125 ----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLN 166
                                +   I  V L+ + ++   I   D    + Y +  S+  
Sbjct: 157 NHNHTIRIFDPSSTVESSSFISPKEIFKVGLKNVEIENFYIHYQDDTHRRTYEIYLSNSA 216

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF---KITANFPAKNKAISLK--- 220
           L IS    N +  L       S    G+ N D   + +   K  +       ++S+    
Sbjct: 217 LNISFYGNNFVLTLQGKLDGQSFQIYGSTNLDEFPTTYENSKFQSTISLDKCSLSIFRDL 276

Query: 221 IQLFPLAYPIIIDLFGNLFWN---EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
           + +FP A      L G +  +    +   ++ +        K  N      K  +     
Sbjct: 277 LTIFPNADFSKTILNGTIKIDKVPNRSINFNVIAQAKNFAYKGGNPFGDI-KVNMEFRLD 335

Query: 278 ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320
           + +  +      +      +  +       +         + N
Sbjct: 336 LPNKKLEFPYISI-LWPGIAEGNAKGTVLWNYKTNVSFQVTAN 377


>gi|119510336|ref|ZP_01629471.1| hypothetical protein N9414_15772 [Nodularia spumigena CCY9414]
 gi|119464973|gb|EAW45875.1| hypothetical protein N9414_15772 [Nodularia spumigena CCY9414]
          Length = 1895

 Score = 74.5 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/380 (11%), Positives = 108/380 (28%), Gaps = 32/380 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +L R  I LG L  V + G           +         T  + + + +       +  
Sbjct: 23  LLSRGGIALGVLMLVTMGGGIWRLWSFVQNELTPLAASGLTNTLNRPVNLGEVTGFSL-- 80

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              V F    I         + ++ + +  +   L+       D+ +  P +     ++G
Sbjct: 81  -RGVEFGASSIPATSTDPDRAVVDAVEVGFDPWQLIFQRQLKLDVTLVNPDIYIEQDNQG 139

Query: 121 VSNWF-QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ----------VYFLSDLNLQI 169
                         +    L+K+  + G++ ++ Q  D+              S +N   
Sbjct: 140 RWITTKIAPQGKQALIKTDLDKLRFRNGKLVLLRQVGDEGVISSSSTIPPVAFSQVNGTA 199

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
                N +    +     S    G      +     + A    +++ +        +  P
Sbjct: 200 QLLKENQLIKFQVRGEADS---GGNVALQGEVIPQTLAAKLQLRSQDLFAAQITDLIKLP 256

Query: 230 IIIDL---FGNLFW---NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
             +      GNL      ++ P+  G  ++ G   ++ N+  +   ++  G  +     V
Sbjct: 257 FDLQAGKVNGNLQIQLTPKQPPLLFGNANLQGVTLQIPNVPQAFLNTQ--GAIRFQGREV 314

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE-NGAESMHDLNETDFFEEEEKKNK 342
           +++                     +   +     +  + A +   LN T       +   
Sbjct: 315 QLNNLASNYGKI--PLVATGIIDPTTGYKLAGRVNAVSVANAQGSLNITAPVPVTGQLKA 372

Query: 343 ND----DLKKDDIQYSVNKK 358
           N      + K  +  SV   
Sbjct: 373 NLQMLGSITKPVLSGSVATI 392


>gi|225619878|ref|YP_002721135.1| hypothetical protein BHWA1_00940 [Brachyspira hyodysenteriae WA1]
 gi|225214697|gb|ACN83431.1| hypothetical protein BHWA1_00940 [Brachyspira hyodysenteriae WA1]
          Length = 1087

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/339 (12%), Positives = 97/339 (28%), Gaps = 25/339 (7%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70
            L  +++VG     ++ +    +   E        +K+ + G  K  +L FP V   ++ 
Sbjct: 37  ILLFLIVVGIAGARIYFNNERMKNLIENIVYSATNRKLEI-GDFKYGLL-FPKVEMSNVV 94

Query: 71  IDQKEDGSFE--SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128
           +   ++ + E   KI+   ++     L   ++ V D+ ID  ++  +    G  N     
Sbjct: 95  LYNSDNFNNEENIKIDNFRLKFSLFSLFFLKLHVQDLSIDNLYVYMFTDESGNWNLPDMP 154

Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS-IDSIKG 187
            +     +   E          +  +   +   +++L L+  ++      P + + +   
Sbjct: 155 PSEPKEEDTNKEPFDFSKLDF-LKLKADVENIRINNLALKADSKSFLTNVPNNGLIASLS 213

Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ------------------LFPLAYP 229
           +       +      +  +  + P   K I LK                    LF L   
Sbjct: 214 NYNLHLDLHTKRFSLSQVMGISAPEVLKDIYLKSFISNSLAYNDSSIFFNDNPLFNLDVS 273

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
              +  G    +E    +                +     +     + I   +V I    
Sbjct: 274 YPKNPDGTENKDEIIITFDFEIDDPNFSYNGKKRDDMQFAAHFLARYNIRTQSVSIENLS 333

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL 328
            + +  +                  +N     A    D 
Sbjct: 334 SELLN-DEILKVIASANQIFSGNIGVNLDTLYARLNLDK 371


>gi|52841135|ref|YP_094934.1| hypothetical protein lpg0900 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52628246|gb|AAU26987.1| hypothetical protein lpg0900 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 522

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/403 (12%), Positives = 114/403 (28%), Gaps = 33/403 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +L ++L+    L   V +  + +   I     ++    + T I  K+  + G I   + P
Sbjct: 12  LLGKILLAFTALMIFVSITLWILAKNIKPETIKQLVSNKITAITHKQSQIDGTISWQLFP 71

Query: 61  FPSVFFKDIRIDQKE-DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P + F  I I  +  + ++   I+ L +  +  PLL G     ++ ID   L     + 
Sbjct: 72  RPGLKFNKIHIGNENLNDNYSLLIDTLLLNLKITPLLKGHFVFSEINIDGLKLFINQENN 131

Query: 120 GVS-----NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL---NLQISA 171
                   N  Q  +T        ++K+ +  G+I +  +    V     +      +  
Sbjct: 132 EKPLSSEKNANQYNTTTYPNEQFAIQKLLLSHGQIILNSKGHSTVLKNIQIGAEQFNLKN 191

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
              ++     +        A+   NF   R +   +      +      I+       I+
Sbjct: 192 SPFSVQIKAKLTDAAFLQTAKANINFKG-RVSLSPSIIDELNSGISKSSIEGQLQIQNIL 250

Query: 232 IDLFGNLFWNEKQPIY--SGVFSVAGDFSKLLNLELSAKKSRLSGNF-------KISDGN 282
           ++ F     N     +     F+                    +           +    
Sbjct: 251 LNQFAIKKINTTLKTHKRDIQFNPLTLSLYNGESIGDMDYVIATQQLLINQTATNLDGKQ 310

Query: 283 VRISRYKLQSILPNSSTDEDN--------------KTKVSQDEENLLNFSENGAESMHDL 328
           +  S  K  +I  N                     K  ++  +  + N + +   +   +
Sbjct: 311 LITSLLKHPAISGNLDYSIHASIPLKALSIESLVSKGTITLKDGEVYNINLDQLLNNLKV 370

Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371
                  E     K      D  Q    +   K    + + Q 
Sbjct: 371 KLNSLMTETPDNIKKLAQSADWDQNKNTQGNTKFKLANFKFQL 413


>gi|110632529|ref|YP_672737.1| AsmA [Mesorhizobium sp. BNC1]
 gi|110283513|gb|ABG61572.1| AsmA [Chelativorans sp. BNC1]
          Length = 603

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 49/366 (13%), Positives = 100/366 (27%), Gaps = 56/366 (15%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI--DQKEDGSFESKIEGLSMR 89
            R     Q +   G  + +    +I++ P       D+ +   +  +G      E + + 
Sbjct: 36  VRNSIAYQMSAWSGYHVRLDETPEINVWP-LQAVLHDVTLLDSEGSNGQTVLDAERIDID 94

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNFYLSSK----------GV-----------SNWFQRK 128
              L  L G+I    M + +P L                 G             +   R 
Sbjct: 95  LSALAALRGDIVFTRMRLIRPVLRVRQRGDELQPISPQGWGKVPQSVEAAKQAVSAAPRN 154

Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188
                + N    KI  + GRI   D ++                  +    L   ++   
Sbjct: 155 PDTAFLPNDSFGKIEFEEGRIVAEDGQNQSDIV------------TSFSGTLDWPALNRQ 202

Query: 189 VIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
                TG +  +  +   +   P       +  + L   A P  +   G    +E   + 
Sbjct: 203 ASLSATGIWHGESISLTASIAEPLILFGGGNTAVSLSLKAPPANLSFEGMASRSENGFV- 261

Query: 248 SGVFSVAGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRISRYKLQSILPNSST 299
            G F+++      L     ++           +S     +   ++  +  L        +
Sbjct: 262 DGDFTLSAPSLSRLVEWTHSRMPLASRIGPFSISARMLGNPKRLKFEQAALTL----DKS 317

Query: 300 DEDNKTKVSQDEENL-----LNFSENGAESMHD-LNETDFFEEEEKKNKNDDLKKDDIQY 353
             +    V+ D         L F      ++ D  N      EE+K+         D++ 
Sbjct: 318 AAEGLLDVTFDSSRPTVAGTLAFDTLNLRALLDAFNPLSTGNEEQKEPGAQTELDFDLRV 377

Query: 354 SVNKKE 359
           S     
Sbjct: 378 SAASAT 383


>gi|332284685|ref|YP_004416596.1| hypothetical protein PT7_1432 [Pusillimonas sp. T7-7]
 gi|330428638|gb|AEC19972.1| hypothetical protein PT7_1432 [Pusillimonas sp. T7-7]
          Length = 1220

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 91/289 (31%), Gaps = 22/289 (7%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWT--DFREDFERQATLIVGKKIAVKGGIKIHI 58
           +L+ V       + V+ +       ++     ++R   ERQ +  +   +++ G I I  
Sbjct: 8   ILKLVGKIALIAYFVLGLLFLGARYWVFPNVNEWRPQIERQLSQALNADVSL-GSIAIDW 66

Query: 59  -LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
               P +   D+++   E G     +        +  LLSG++++  +      L     
Sbjct: 67  KGLNPKLKALDVQLAD-EQGRRLLAVPEAQATISWRSLLSGDLQLVMLQASGLDLTLRRD 125

Query: 118 SKGVSNW------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSD 164
                                          +    I ++   ++ ID+  +     L  
Sbjct: 126 LDDQVWVMGRSFSLGEPMSSPEDVGNAADWLLGQRDIMLRSATLRWIDETRNAPPLVLER 185

Query: 165 LNLQISARFLNIISPLSID---SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221
           + L++S R  +    L  D   ++  S+   G       + + +   N         ++ 
Sbjct: 186 VALRLSNRQADHRFILQADIPEALGKSLDLRGEFLHTPTKDSERFDLNQGRGQLYAHVE- 244

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270
            + PL +   +D+  +L   +        F   G  S   ++ +     
Sbjct: 245 NMQPLGWAPWVDMPRSLKSGQVSVRSWLKFQAGGIESLTSDVTVKNGYW 293


>gi|256423529|ref|YP_003124182.1| AsmA family protein [Chitinophaga pinensis DSM 2588]
 gi|256038437|gb|ACU61981.1| AsmA family protein [Chitinophaga pinensis DSM 2588]
          Length = 1031

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/328 (8%), Positives = 87/328 (26%), Gaps = 38/328 (11%)

Query: 31  DFREDFERQATLIVGKKIAVKGGIKIHIL---PFPSVFFKDIRIDQKEDG--SFESKIEG 85
             +       +  +          ++      P  ++   D+ +                
Sbjct: 37  KIKTWANNSISTELNFS-----KARLSFFNHFPSLTLTLYDVSLKGSAPFEHDTLVTANA 91

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------FQRKSTMDMIHNVI 138
           +S+      + S  +R+ ++Y+ + +++  +  +G  N+         ++S      ++ 
Sbjct: 92  VSLGVNLGSVFSKTLRIDEIYLTKGNIHVLVDGEGRPNYNVYQSSAGAKESADSSGASLK 151

Query: 139 LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD 198
           +E+I +    I   D+         ++N        +    L       S+         
Sbjct: 152 IERIQLDHCGIIYHDKSLGLYIRAREVNYLGKGDLESSQFDLFSKINIASLDLSYGEVPY 211

Query: 199 NKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257
            +              K+++   +        + + L G   +           S     
Sbjct: 212 IQSKKLNGDLITRINTKSLNFSFERNDLKINQLPVKLNGAFSFLRNGYKMDFRLSSGAST 271

Query: 258 SKLLNLELSAK----------------KSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
              L   L A                  + L+GN+      +    +     + +     
Sbjct: 272 LAALFSALPADYVSWMEQTEIKGDAEVSASLTGNYIAKTNKM--PDFSFNIKVRDGVIAH 329

Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLN 329
              +  S+ ++  L+F     +   +  
Sbjct: 330 TGAS--SKVQQLRLDFQTKLPQMNTEKF 355


>gi|90021075|ref|YP_526902.1| hypothetical protein Sde_1428 [Saccharophagus degradans 2-40]
 gi|89950675|gb|ABD80690.1| AsmA [Saccharophagus degradans 2-40]
          Length = 711

 Score = 74.2 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/348 (11%), Positives = 97/348 (27%), Gaps = 39/348 (11%)

Query: 13  FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID 72
               ++G   + L +D    +   + Q            G +   + P  ++   DI + 
Sbjct: 15  AVFAIIGLAALILTLDINRLKPIIQTQLEKQ-DISATFTGDLSWTLYPSLAIKANDIALK 73

Query: 73  QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS--------------S 118
             ++    ++I G     + +PLL   I V ++ +    + +  +              +
Sbjct: 74  HAQNNQNLAQIGGAVFSVKLMPLLQRNIEVNELSLTNSEIWYAPNTLELLSGNTTTALAT 133

Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD------QVYFLSDLNLQISAR 172
               N      +     N+ + K+        +  +++       + +   D+NL+  + 
Sbjct: 134 NNSDNPSNESESASQQINLAILKVAANNVTAHVTGEDNTTSDFTIEQFTAYDINLEGQSF 193

Query: 173 FLNIIS-------PLSIDSIKGSVIAE---GTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
            L + +       P+      G +       +       +  +  A   A++K   L + 
Sbjct: 194 PLELKTIIALPQQPVIRTFAAGRIAISPSTSSLTSSELEATIEFGAAQAAQSKNAQLTVT 253

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     DL          P    +           N ++      ++ +  +    
Sbjct: 254 TANTTLNWAQDLDLTTTLAISSPNVRDLLKALNIEIDTHNPQVLNGL-EINSDITLKQQQ 312

Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQD---EENLLNFSENGAESMHD 327
           + +   KL        T      KV+            +    E   D
Sbjct: 313 LALDNIKL----SLDKTRATGNIKVNLAQNTGLPPTAVNLAIGEINVD 356


>gi|330998928|ref|ZP_08322655.1| hypothetical protein HMPREF9439_00272 [Parasutterella
           excrementihominis YIT 11859]
 gi|329576142|gb|EGG57661.1| hypothetical protein HMPREF9439_00272 [Parasutterella
           excrementihominis YIT 11859]
          Length = 977

 Score = 74.2 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/403 (10%), Positives = 110/403 (27%), Gaps = 41/403 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + L     +   +                    ++ A  IVG+ I  +   ++   PF
Sbjct: 1   MGKKLWITTGIIGALAAAYTAGGFLGVPYGVNWALKKYAEPIVGRTITTQ---EVKFNPF 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
                 K + + QK+       +  L  +  +  L      V  + ID  +     +   
Sbjct: 58  TLQFSVKGLNV-QKDGEPALLSVGSLQTKVLWDSLFKLSPLVQYITIDGLNSTVIRTGLD 116

Query: 121 VSNW-------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
             N+              + +   D      +  I +    I + D+   +V  ++DLN 
Sbjct: 117 TFNFSDIIQRIQEMPTSPEEEKKDDKPLQFSIGNIKLTNSSITLDDKFRHKVDKVTDLNF 176

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
            +       +     + +   +  +   NF+ +  A    +      K   +   +  L 
Sbjct: 177 ALP------LISNFQNDVDVPITPDLKFNFNGEPFAINAESVPFTPGKKTGVNFTVTGLN 230

Query: 228 YPIIIDLFG---NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG---------- 274
                       N+   +     +          +           ++ G          
Sbjct: 231 LENAASFNPIPLNVKVTKGTMDCAFNLDFEKKQGEENAYLRLKGTVKMKGVGLEDELGKA 290

Query: 275 --NFKISDGNVRISRYKLQSILPN-SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331
                + + +  +  +       +       N + V   +++ LN  +          + 
Sbjct: 291 YQIIGVKEIDANLKEFAFFRQNLDIGEIQIHNPSVVVIRDKDSLNLVQLLTHI-VKEQKA 349

Query: 332 DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374
              ++ ++  +   L +D+ +   +     D    +    NF+
Sbjct: 350 QAKQDAKEAKEKATLPEDEKKTPNDWTWNIDKVSVRNGIINFT 392



 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/408 (12%), Positives = 110/408 (26%), Gaps = 75/408 (18%)

Query: 18  VGAFTVPLFIDWT---------DFREDFERQATL-IVGKKIAVKGGIKIHILPFPSVFFK 67
            G    P  +D           D      + ++  +     + KG +K+++    S  + 
Sbjct: 437 GGIVITPFSMDLNLQSSGLSIADLTPYISQYSSAHVTQGTFSNKGELKLNLAKDVSFSYS 496

Query: 68  ---DIRIDQKEDGSFESKIEGLSM---RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
              D+      D    + +   ++         L   +I +  + +  P++N  ++  G 
Sbjct: 497 GNADVASLNVTDKQGAAAVSLKNLAVGGISVSGLSPLQISLGTIALTSPNVNVVMNKNGS 556

Query: 122 SNWFQRKSTMDMIHN---------------------------VILEKIHVKGGRIKIIDQ 154
            N     +  +                               + + KI +  GR++  D 
Sbjct: 557 INLASLGTPSNAPAPAATTDKPAASKPQSKAQASSGSSSAPAINVGKITLTDGRVRYTDN 616

Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214
             +  + L+  NL  S    +  +       KG+   +  G  +        T N     
Sbjct: 617 SIEPTFKLNASNLAGSLSNYSTTT-------KGNATVDVKGLLNGTPMNISGTINPFESK 669

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLF---WNEKQPIYSGVFSVAGDFSKLLNL-------- 263
             +++K ++  L+ P               +    Y G F +  D     N         
Sbjct: 670 LKLAMKGEVTSLSLPAFSPFSAKFTGHPIEKGLLTYKGAFDINQDKLTSENALVINKLEF 729

Query: 264 --ELSAKKSRLSGNFKISDGNVRISRYKLQS---ILPNSSTDEDNKTKVS-QDEENLLNF 317
             ++   K  L     +S    R  +  L        +          V           
Sbjct: 730 GSQVPDAKDALPVGLAVSLLQDRQGQIDLNIPVSGSLDDPEFSVGGIIVKVIVNLISKAV 789

Query: 318 SENGAES-------MHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358
           +   A           DLN   F     + ++   +K  +I     + 
Sbjct: 790 TAPFALIGSMFGGEDMDLNNLQFASGSARLDEKT-IKALNIVAKAMQD 836


>gi|197116542|ref|YP_002136969.1| hypothetical protein Gbem_0142 [Geobacter bemidjiensis Bem]
 gi|197085902|gb|ACH37173.1| conserved hypothetical protein [Geobacter bemidjiensis Bem]
          Length = 541

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 92/260 (35%), Gaps = 20/260 (7%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV-GKKIAVKGGIKIHILPFPSVFF 66
            +  +   +++  F    FID    R   E++    + G  + +   +   ++   S+  
Sbjct: 24  WIVGIVVALVLIVFIASFFID-EPLRRATEKKMNQSLKGYSVRL-PKLHFSLI-GLSITL 80

Query: 67  KDIRID-QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF---YLSSKGVS 122
           K + +  Q       ++   L     +  +LSG++   +M +D P ++     L S+  S
Sbjct: 81  KGLTVSQQAHPEPPVAEFPYLRASVHWREILSGKLVG-EMRLDDPKIHINLTQLKSEAKS 139

Query: 123 NWFQRKSTMDMI----HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
               ++          + + +  + +    I  ID+++ +   LS+L+L+ +      + 
Sbjct: 140 KVPMKEKGWQQAVEAIYPLKINHLKINDASITYIDEDAKRPLVLSNLDLEANNIRNIHLP 199

Query: 179 P---LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
                S   ++  +   G G  D K +        P       LK++  P+ Y   +   
Sbjct: 200 DKVYPSSFHLETDIFKTGHGTVDGKANFLA----EPTPAVKADLKLEKVPIDYFQPVLAR 255

Query: 236 GNLFWNEKQPIYSGVFSVAG 255
            N+         +G      
Sbjct: 256 YNMSVQGGALSGNGDIEYGR 275


>gi|45659203|ref|YP_003289.1| hypothetical protein LIC13386 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45602449|gb|AAS71926.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 693

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 46/343 (13%), Positives = 105/343 (30%), Gaps = 46/343 (13%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS 78
               VPL I    +++          G ++ V G   + + PFP +  K+++I  +++  
Sbjct: 40  SFTLVPLLIREDFYKDFILTAIEQKTGLEVKV-GSSDLVLFPFPGIELKEVQI--RKEEL 96

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------------- 124
                + + +   +  LL  ++ + D+YI    +N + +  G  +               
Sbjct: 97  VIGISDRIKVDISWFGLLGQKVEIRDVYISGGKINLHKNKDGSVDLIEFFQQDTEDSENS 156

Query: 125 ----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLN 166
                                +   I  V L+ + ++   I   D    + Y +  S+  
Sbjct: 157 NHNHTIRIFDPSSTVESSSFISPKEIFKVGLKNVEIENFYIHYQDDTHRKTYEIYLSNSA 216

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF---KITANFPAKNKAISLK--- 220
           L IS    N +  L       S    G+ N D   + +   K  +       ++S+    
Sbjct: 217 LNISFYGNNFVLTLQGKLDGQSFQIYGSTNLDEFPTTYENSKFQSTISLDKCSLSIFRDL 276

Query: 221 IQLFPLAYPIIIDLFGNLFWN---EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
           + +FP A      L G +  +    +   ++ +        K  N      K  +     
Sbjct: 277 LTIFPNADFSKTILNGTIKIDKVPNRSINFNVIAQAKNFAYKGGNPFGDI-KVNMEFRLD 335

Query: 278 ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320
           + +  +      +      +  +       +         + N
Sbjct: 336 LPNKKLEFPYISI-LWPGIAEGNAKGTVLWNYKTNVSFQVTAN 377


>gi|88606722|ref|YP_504677.1| hypothetical protein APH_0043 [Anaplasma phagocytophilum HZ]
 gi|88597785|gb|ABD43255.1| conserved hypothetical protein [Anaplasma phagocytophilum HZ]
          Length = 908

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 56/375 (14%), Positives = 124/375 (33%), Gaps = 24/375 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWT-DFREDFERQAT---LIVGKKIAVKGGIKIHIL 59
           + L  L     + L     VP  IDW   + +    Q        G  I V G I+   L
Sbjct: 2   KFLGYLCGAAIIALAAIIGVPYLIDWDARYGDYAFEQLGVAVKNSGVSIKVLGDIRGKFL 61

Query: 60  PFPSVFFKDIRID---QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           P P +  +++ +    + +  S    ++ L +      LL GE +V  + +         
Sbjct: 62  P-PKLIVRNLYLGCDEESKGCSGVIAVDRLEIGLSVWFLLRGERKVEYIDLYG----LRT 116

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
            +K + +    ++   +    I + + V G   +           +    ++        
Sbjct: 117 DAKSLGDVVTTQAGAGVGKVRIFDSVIVPGQTFE---PSPRNAVHVKQSEIRSRGNLYRT 173

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
            +   I   K S++A+        + +  ++T+     + +   +  +      + +++F
Sbjct: 174 NTEFRIGRGKYSLVAKVELQDSGDKTATVELTSGNTRVSLSGKGRYDVGAGDRTL-LEVF 232

Query: 236 GNLFWNEKQPIYS-GVFSVAGDFSKLLNLEL---SAKKSRLSGNFKISDGN-VRISRYKL 290
           G   W       + G FS A      ++      S ++  L   FK   G+   ++R  +
Sbjct: 233 GGFEWLLDAKTSNLGEFSQALSVVTRIDALEHIHSTEELSLLAEFKHDVGHGFEVNRLDI 292

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350
           +      +        +S D +   +F +  A   HD  + D          +  +    
Sbjct: 293 EGSSLTGNVKGKCNASMSCDAQLAFSFMDIDALVRHD--DPDVNIYNTPVRGSSSISFPV 350

Query: 351 IQYSVNKKEEKDNSH 365
           I   ++ + E D   
Sbjct: 351 IVLGMDAQAELDIKE 365


>gi|94969941|ref|YP_591989.1| hypothetical protein Acid345_2914 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551991|gb|ABF41915.1| hypothetical protein Acid345_2914 [Candidatus Koribacter versatilis
           Ellin345]
          Length = 544

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/300 (11%), Positives = 97/300 (32%), Gaps = 15/300 (5%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70
              ++++ G FTV  ++D    +             ++A+   I + +LP   V    + 
Sbjct: 43  VAAALIVGGVFTVNFYLDRE-VQTLARDMLAEHFHSEVALD-TIHVRLLPTARVSGSGLV 100

Query: 71  IDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128
           + Q   G+       +  S  A    +LS   ++  + ++   +      +G      ++
Sbjct: 101 LSQTYGGAKIPFISAQKFSANASLWGMLSHTRQLHHVRVEGLIITVARHPQGEKQPTAKR 160

Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188
              +    + ++++   G ++ I+  +  +   + D++  +  +         + +++ +
Sbjct: 161 KVPE----LDIDEVEADGAKLVILANKPGKRSLVYDMHHLVLTQVGKSNVMHYLANLRNA 216

Query: 189 VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248
           +   G    +     +       A    +            +   + G L          
Sbjct: 217 LPP-GEIEAEGSFGPWNF---DDAGGTHLDGNYVFKKADLGVFKQISGTLSSTGSFTGEL 272

Query: 249 GVFSVAGDFS-KLLNLELSAKKSRLSGNFK--ISDGNVRISRYKLQSILPNSSTDEDNKT 305
           G   V G        ++  +    L  +F   +   N     + +++ L NS+   +   
Sbjct: 273 GRIDVKGSTETPDFAVKSGSHPVNLHTDFDATVDGTNGDTQLHSVRAKLLNSTFVVNGTI 332


>gi|89889555|ref|ZP_01201066.1| outer membrane protein [Flavobacteria bacterium BBFL7]
 gi|89517828|gb|EAS20484.1| outer membrane protein [Flavobacteria bacterium BBFL7]
          Length = 904

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/389 (11%), Positives = 104/389 (26%), Gaps = 47/389 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI--- 58
           +++    LG     V+V     P            + +    +  ++     + + +   
Sbjct: 1   MKKFFKILGVFLLAVVVLLVAAPFLF-KDQIATIIKNKLNGALDAQVEFA-EVDLSLFRA 58

Query: 59  LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLL---SGEIRVFDMYIDQPHLN 113
            P   +   ++ I  K    G      + + +      L    S  I + ++ I+     
Sbjct: 59  FPDARLQIDELSIINKAPFEGDTLFYGKEVKLDLPVGDLFNDASDPIHINELVINDAISR 118

Query: 114 FYLSSKGVSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
             ++  G ++W            +         +  L    +        D  +     L
Sbjct: 119 LKVNEDGKASWDIAKVDSTAVVVEEPQDTTAGFSFDLNHYEINNSDFSYEDIATKNKLRL 178

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVI-AEGTGNFDNKRSAFKITANFPAKNKAISLKI 221
            +L    +  F    S L  ++        +       ++            N+  +L+ 
Sbjct: 179 MNLTHSGNGDFSLDSSTLDTETSAQVFYGLDDVEYLSGQQVELDADILMDLANQKYTLQ- 237

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS------AKKSRLSGN 275
           +   L   + ++L G +   E   +    F       K     +             +G+
Sbjct: 238 ENEALINDLKLNLDGYVQMVEDGTMVDLAFKTPSSDFKNFFAVIPEVYRKNLDGITTTGD 297

Query: 276 FKISD------GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL- 328
           F ++        +V I +  +     N+S            +   L  S    +    + 
Sbjct: 298 FTVNGVINGMVDDVHIPKLDINISSNNASF-----------KYPDLPQSVTKIDIDTQIK 346

Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNK 357
           N T   E+   +  N        +   N 
Sbjct: 347 NTTGLAEDTYVRIGNVAFNIGQDRLKGNA 375


>gi|54296920|ref|YP_123289.1| hypothetical protein lpp0961 [Legionella pneumophila str. Paris]
 gi|53750705|emb|CAH12112.1| hypothetical protein lpp0961 [Legionella pneumophila str. Paris]
          Length = 513

 Score = 73.8 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 52/403 (12%), Positives = 114/403 (28%), Gaps = 33/403 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +L ++L+    L   V +  + +   I     ++    + T I  K+  + G I   + P
Sbjct: 3   LLGKILLAFTALMIFVSITLWILAKNIKPETIKQLVSNKITAITHKQSQIDGTISWQLFP 62

Query: 61  FPSVFFKDIRIDQKE-DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P + F  I I  +  + ++   I+ L +  +  PLL G     ++ ID   L     + 
Sbjct: 63  RPGLKFNKIHIGNENLNDNYSLLIDTLLLNLKITPLLKGHFVFSEINIDGLKLFINQENN 122

Query: 120 GVS-----NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV---YFLSDLNLQISA 171
                   N  Q  +T        ++K+ +  G+I +  +    V     +      +  
Sbjct: 123 EKPLSSEKNANQYNTTTYPNEQFAIQKLLLSHGQIILNSKGHSTVLKNIQIGAEQFNLKN 182

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
              ++     +        A+   NF   R +   +      +      I+       I+
Sbjct: 183 SPFSVQIKAKLTDAAFLQTAKANINFKG-RVSLSPSIIDELNSGISKSSIEGQLQIQNIL 241

Query: 232 IDLFGNLFWNEKQPIY--SGVFSVAGDFSKLLNLELSAKKSRLSGNF-------KISDGN 282
           ++ F     N     +     F+                    +           +    
Sbjct: 242 LNQFAIKKINTTLKTHKRDIQFNPLTLSLYNGESIGDMDYVIATQQLLINQTATNLDGKQ 301

Query: 283 VRISRYKLQSILPNSSTDEDN--------------KTKVSQDEENLLNFSENGAESMHDL 328
           +  S  K  +I  N                     K  ++  +  + N + +   +   +
Sbjct: 302 LITSLLKHPAISGNLDYSIHASIPLKALSIESLVSKGTITLKDGEVYNINLDQLLNNLKV 361

Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371
                  E     K      D  Q    +   K    + + Q 
Sbjct: 362 KLNSLMTETPDNIKKLAQSADWDQNKNTQGNTKFKLANFKFQL 404


>gi|163786481|ref|ZP_02180929.1| putative outer membrane protein [Flavobacteriales bacterium ALC-1]
 gi|159878341|gb|EDP72397.1| putative outer membrane protein [Flavobacteriales bacterium ALC-1]
          Length = 886

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/391 (9%), Positives = 113/391 (28%), Gaps = 38/391 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI--- 58
           ++++   +G +  + +     +P F+  +      +  A   +   ++    I + +   
Sbjct: 1   MKKIFKIIGIVLLIFIAILIAIP-FVLESKIDAIVQNYADENLDADLSFD-DISLSLISS 58

Query: 59  LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSG---EIRVFDMYIDQPHLN 113
            P   V  ++++I  +        +  + +S       L       + + ++  D+  L 
Sbjct: 59  FPKAEVNVENLKITNRAPFKDETLATAKSISFEMPLGELFKSSEEPLVINEIIADEMLLT 118

Query: 114 FYLSSKGVSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
              +  G +N+               +      +  +E   +       ID+ ++   + 
Sbjct: 119 LVTNKNGTTNYDIVKKDENTDTVSGSNKEASGFSFDIENYELNNSAFTYIDEGTNTKLYA 178

Query: 163 SDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221
           +++N      F    S L   +    S+  + T    N         +   + +  + K 
Sbjct: 179 TEINHNGKGIFSGEQSELDTKTEARISMSIDSTEYLSNNIIKLDALIDLDLEEEKYTFK- 237

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281
           +       + ++  G +   EK       F       K     +    ++          
Sbjct: 238 ENKGFINALPLEFQGFVQMVEKGQQIDISFKNPESSFKDFLAVIPKAYAK---------- 287

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341
              I           +      K  VS      L+ +    ++     +     +    N
Sbjct: 288 --NIENVNTTGNFTVNGII---KGLVSDKTIPNLDINMRSDKASFKYPDLPKSVDNIIIN 342

Query: 342 KNDDLKKDDIQYSVNKKEEKDNSHDKENQEN 372
            +      ++  +     + D   D++  ++
Sbjct: 343 ASVKNTTGNVDDTYIDLNQLDFKIDQDVFKS 373


>gi|264680880|ref|YP_003280790.1| hypothetical protein CtCNB1_4748 [Comamonas testosteroni CNB-2]
 gi|262211396|gb|ACY35494.1| conserved hypothetical protein [Comamonas testosteroni CNB-2]
          Length = 1332

 Score = 73.4 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 90/291 (30%), Gaps = 27/291 (9%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89
             +R + E  A+  +G  +++           P+    D+ +    + S    +  + + 
Sbjct: 11  EQWRPELESLASRSLGVPVSIGRLNAYRSGLVPTFELGDVVLHDPANKSEALLLPKVVVA 70

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------QRKSTMDMIHNVILEKIH 143
                L++  + V  +Y++ P L     + G                 D        +I 
Sbjct: 71  VSAHSLMT--LGVEQIYLEGPDLTVRRDADGQIFVAGIAVSSDPGQGTDSDWIFSQPEIA 128

Query: 144 VKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS-VIAEGTGNFD--- 198
           ++ G+++ +D+  +     L D++L +  +  +    L     +G        GNF    
Sbjct: 129 IRSGKLQWVDELRNAAPLQLQDVDLVLRNKRWHHSLRLDATPPEGWGQRFTVMGNFKEPL 188

Query: 199 -----NKRSAFKITANFPAKNKAIS-LKIQLFPLAYPIIIDLFGNLFWNEKQPIYS---- 248
                 +   +   A     +  +S L   L P  + +     G++              
Sbjct: 189 LSVHEGRLERWSGQAYLDFTHIDLSHLGQYLGPQDWKLQ-QGKGSVRAWLDVDHGQPVGG 247

Query: 249 -GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
               +V     +  +         L G  +  + N    ++ +Q +   + 
Sbjct: 248 VADVAVQALQLQWRDRPEPLALQALRGRLRAKNQNGY--QFSVQGLQFTAD 296


>gi|218439935|ref|YP_002378264.1| hypothetical protein PCC7424_2994 [Cyanothece sp. PCC 7424]
 gi|218172663|gb|ACK71396.1| protein of unknown function DUF490 [Cyanothece sp. PCC 7424]
          Length = 1813

 Score = 73.4 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 46/382 (12%), Positives = 107/382 (28%), Gaps = 33/382 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR  +GLG +  + + G      F+         E++ T  + + + +     I +    
Sbjct: 40  RRFWLGLGTVSFLSISGGLVYGWFLIDRHLAPILEQELTNFLNRPVKIGSVEGISL---T 96

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            V F    I    D   +  +E + +    + LL+      D+   +P +       G  
Sbjct: 97  GVRFGKSEILPTSDDPAKIALEQVDVTFNPIKLLTHSQLALDVKAIRPDIYVQQGVNGAW 156

Query: 123 NWFQRKSTMDMIHN---VILEKIHVKGGRIKIIDQESDQVYF--------LSDLNLQISA 171
                       +    + LE +      + +I + +             +++L+     
Sbjct: 157 LITPFDGVKSTGNEKVTIELETLRFIDADVIVIARSATNQLQSPVNLFFPVANLDFSDQG 216

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK-----ITANFPAKNKAISLKIQLFPL 226
           R ++      + +  G V   G G  + +          I A        +   +    +
Sbjct: 217 RIIDFEGEGKL-AKGGQVKLSGVGKTNTQEINLSVVGEQIKATDVKDLLPLPFNLNEGEI 275

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
              + + L       ++ P  +G+ ++          +L    ++  G  + +   V + 
Sbjct: 276 GANLTVKLR-----PKQSPSIAGIATLNNV--TAQIPQLPQSFTQSKGILRFNQTRVNLE 328

Query: 287 RYKLQSILP----NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342
               Q        N   D      +    E                       + +   K
Sbjct: 329 GVTTQFGQLAGVANGKIDLAGGYDLQAKTEP-FLVQNALKTLNIPAPTVPITAQLQSDIK 387

Query: 343 ND-DLKKDDIQYSVNKKEEKDN 363
               L K  +  +VN  +    
Sbjct: 388 VRGSLAKPQVSLTVNSTQAAKI 409


>gi|300113171|ref|YP_003759746.1| hypothetical protein Nwat_0460 [Nitrosococcus watsonii C-113]
 gi|299539108|gb|ADJ27425.1| conserved hypothetical protein [Nitrosococcus watsonii C-113]
          Length = 1289

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 80/317 (25%), Gaps = 33/317 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60
           R   + LG L   +++    +        D      R  +  +G+++ V   I +     
Sbjct: 9   RYFYLSLGILVCCIVLAFGALWALWTVVEDEPATISRWLSTALGREVHVS-EIGLSWRGG 67

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLSSK 119
            P +    +RI   +       +  + + A      +  E  +  + I    L       
Sbjct: 68  EPRLHLTGVRIIDPQTERPLLNVREIYLDAAPSRTSVEEEWILRHLTIIGGELTVERKPA 127

Query: 120 G--------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV---YFLSDLNLQ 168
           G                        + L ++ +    I+ +D   ++      + +L L+
Sbjct: 128 GCIRVYGLQDLESPCPHPPRLPAWVLNLTQLTLVDMAIRWLDPVLERKPLELQVRELQLR 187

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
                  +    ++    GS        F             P     + LK +   LA 
Sbjct: 188 NEEDRHWVEGRATLAEKFGS-EIVVKAKFTG------GGIRDPKSQGILYLKGEGLQLAS 240

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
               D    L++   +                      A   ++   F   +  +  +  
Sbjct: 241 WQAFDFLAGLYFTHGKGDLELGLR-----------WEKAVLHQVLAKFDWENLKITGNTQ 289

Query: 289 KLQSILPNSSTDEDNKT 305
             +     S        
Sbjct: 290 TTEVPSLISFQRLAGTA 306


>gi|197123965|ref|YP_002135916.1| hypothetical protein AnaeK_3574 [Anaeromyxobacter sp. K]
 gi|196173814|gb|ACG74787.1| protein of unknown function DUF748 [Anaeromyxobacter sp. K]
          Length = 957

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/324 (11%), Positives = 99/324 (30%), Gaps = 36/324 (11%)

Query: 16  VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQK 74
           +L     +      +  R    +QA+  + + + +    ++ I P   SV  + +R+   
Sbjct: 24  LLCTYTALGFLAAPSLVRRVAVKQASAALRRPVEID---RVRINPLALSVTVEGLRVKHG 80

Query: 75  EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR------- 127
           +     +  + L +R   L LL+G++   ++ + +P  +  L ++G   +          
Sbjct: 81  DGA-PFAAWDSLYVRLAPLRLLAGDVGFAEIRLVRPAFHVGLDARGALTFEDLLAGEPDA 139

Query: 128 -------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY--FLSDLNLQISARFLNIIS 178
                      +    + + ++ V+  R+   D      +   L  L +++ +       
Sbjct: 140 PKAGAPAAPAKEGGLGLSIGRLAVEEARVVFRDATRKPAFETTLGPLTVRLESFRTRGGG 199

Query: 179 PLSIDSIKG-----SVIAEGTGNFDNKRSAFKITANFPAKNKAISL---KIQLFPLAYPI 230
                         +    GT      RS+  +        K       +  +      +
Sbjct: 200 DSPYSFTGTTESGETFRWTGTVRSAPLRSSGTLAFERIQLPKYAPYIHDQAPVDLAEGVL 259

Query: 231 IIDLFGNLFWNEKQPIYS---GVFSVAGDFSK---LLNLELSAKKSRLSG-NFKISDGNV 283
             +    L W     +     G  SV           +  +   +  ++G          
Sbjct: 260 DFETAYELAWGADARVLRTSGGKLSVERLALAPRGEADAPVRLPRVEVAGIQVDALAKQA 319

Query: 284 RISRYKLQSILPNSSTDEDNKTKV 307
            ++   ++     +  ++D K ++
Sbjct: 320 SVATVAVRGGAVRARLEQDGKLEL 343


>gi|299531874|ref|ZP_07045274.1| hypothetical protein CTS44_13813 [Comamonas testosteroni S44]
 gi|298720049|gb|EFI61006.1| hypothetical protein CTS44_13813 [Comamonas testosteroni S44]
          Length = 1353

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 89/291 (30%), Gaps = 27/291 (9%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89
             +R + E  A+  +G  +++           P+    D+ +    + S    +  + + 
Sbjct: 32  EQWRPELESLASRSLGVPVSIGRLNAYRSGLVPTFELGDVVLHDPANKSEALLLPKVVVA 91

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------QRKSTMDMIHNVILEKIH 143
                L++  + V  +Y++ P L     + G                 D        +I 
Sbjct: 92  VSAHSLMT--LGVEQIYLEGPDLTVRRDADGQIFVAGIAVSSDPGQGTDSDWIFSQPEIA 149

Query: 144 VKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS-VIAEGTGNFD--- 198
           ++ G+++ +D+  +     L D++L +  +  +    L     +G        GNF    
Sbjct: 150 IRSGKLQWVDELRNAAPLQLQDVDLVLRNKRWHHSLRLDATPPEGWGQRFTVMGNFKEPL 209

Query: 199 -----NKRSAFKITANFPAKNKAIS-LKIQLFPLAYPIIIDLFGNLFWNEKQPIYS---- 248
                 +   +   A     +  +S L   L P  + +     G++              
Sbjct: 210 LSVHEGRLERWSGQAYLDFTHIDLSHLGQYLGPQDWKLQ-QGKGSVRAWLDVDHGQPVGG 268

Query: 249 -GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
               +V     +            L G  +  + N    ++ +Q +   + 
Sbjct: 269 VADVAVQALQLQWRGRPEPLALQALRGRLRAKNQNGY--QFSVQGLQFTAD 317


>gi|260427435|ref|ZP_05781414.1| conserved hypothetical protein [Citreicella sp. SE45]
 gi|260421927|gb|EEX15178.1| conserved hypothetical protein [Citreicella sp. SE45]
          Length = 1086

 Score = 73.0 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 46/316 (14%), Positives = 86/316 (27%), Gaps = 20/316 (6%)

Query: 5   VLIGLGFLFSVVLVGAFTVP--LFIDWTDFREDFERQATLIV-GKKIAVKGGIKIHILPF 61
           V   L  L  +V      +           R   E +    V G      G +++ +   
Sbjct: 15  VFAVLSVLALLVGASVLALIGRPLSAPDWLRARIEARLNEAVPGLDFRF-GDVRLLVQSD 73

Query: 62  --PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
               +   D+ I   + G+  + +  L       PLL GE+ +    +    L+      
Sbjct: 74  ALARIVLTDVDIR-TDSGAPVATLADLEAGLAPAPLLRGEVALRAARLSGAMLSLRRDED 132

Query: 120 GV------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
           G         +       D    +      V   R+  + + S +   +   + +    +
Sbjct: 133 GRLGLALGDVFASGTRMPDFPTIIAQVDAAVADPRLAGLQELSAEALTIRYEDARAGRGW 192

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNK---RSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                 LS+    G +   G  +   +    +   I A       + S  + L  L    
Sbjct: 193 TADGGRLSLTREDGRLRLAGDVSLLGRGDVAATLAINAESVIGETSGSFGLNLSGLDSQD 252

Query: 231 IIDLFGNLFWNEKQPI-YSGVFSVAGD---FSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
           I      L W E      SG              LN  L   +  L  N +      ++ 
Sbjct: 253 IASQSPALAWLEALRAPISGALRGTATEDGQLGALNATLQIGEGVLQPNARTRPIPFQLG 312

Query: 287 RYKLQSILPNSSTDED 302
           R         ++   D
Sbjct: 313 RTYFSYDPATTTLTFD 328


>gi|119898052|ref|YP_933265.1| hypothetical protein azo1761 [Azoarcus sp. BH72]
 gi|119670465|emb|CAL94378.1| hypothetical protein azo1761 [Azoarcus sp. BH72]
          Length = 1201

 Score = 73.0 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 35/353 (9%), Positives = 91/353 (25%), Gaps = 54/353 (15%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR+ +    +   +L         +             +   G ++ +     + I PF 
Sbjct: 7   RRIAVWTAAVAVSLLALYAAAGFLLLPWLVSRKLPELVSQRFGLQLTLD---ALRINPFL 63

Query: 63  -SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            ++      + Q  DG+     +      ++  +      +  +  D   +       G 
Sbjct: 64  LTLEAGPATLTQ-SDGNPLLVAQSARFDLDWAGVPYRHWTLDQVSFDGVKVQLVRDQDGR 122

Query: 122 S-----------------------------NWFQRKSTMDMIHNVILEKIHVKGGRIKII 152
                                                    + +V++  + ++   + +I
Sbjct: 123 WLLPRAPAPAAAAEAAPARQDAAGTIGATAPDAAPPPPETPVADVLIRHLALRNATLTLI 182

Query: 153 DQES-DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP 211
           D+ S D    ++ L+ +I        +  +   +  ++  +G    + + +     ++  
Sbjct: 183 DRASPDAALAVAGLDAEIDGLATAPSARPASYRLGATLPGDGRIAAEGEFALAGRHSSGT 242

Query: 212 AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR 271
            +  A SL      L     +   G    +     Y    +       +  L L A    
Sbjct: 243 LRLDAASLAPWWPLLQRDWRLAAPG-GRIDSASARYWVALAGDQPEVTVEQLALQASALT 301

Query: 272 L------------------SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
           L                   G   ++   + +   +L       S D D    
Sbjct: 302 LQPENAREPLLALDTLSIAEGRLDLAGRQLVLRGLRLAGGSVGVSADADGTLD 354



 Score = 41.4 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 10/138 (7%), Positives = 46/138 (33%), Gaps = 7/138 (5%)

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             ++    + +  +        ++ LS+    L L   ++ +  + +    +     + G
Sbjct: 292 QLALQASALTLQPENAREPLLALDTLSIAEGRLDLAGRQLVLRGLRLAGGSVGVSADADG 351

Query: 121 VSNWFQRKSTM------DMIHNVILEKIHVKGGRIKIID-QESDQVYFLSDLNLQISARF 173
             +W + +         +    + L +  +    ++  +   + +    + ++ +     
Sbjct: 352 TLDWARLRRQPAASATEEAPWQIELPQAELSALAVRYRELAGAGRRIESARVDARADLVL 411

Query: 174 LNIISPLSIDSIKGSVIA 191
                  +I ++ G++ A
Sbjct: 412 GGSEGGAAIHALHGTLAA 429


>gi|302879253|ref|YP_003847817.1| hypothetical protein Galf_2047 [Gallionella capsiferriformans ES-2]
 gi|302582042|gb|ADL56053.1| hypothetical protein Galf_2047 [Gallionella capsiferriformans ES-2]
          Length = 1287

 Score = 73.0 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 42/334 (12%), Positives = 102/334 (30%), Gaps = 31/334 (9%)

Query: 12  LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIR 70
              ++++  + +P   D   F +      +  +G  ++++  I+ +     P +   ++R
Sbjct: 33  ALIIIVLRYWLLP---DIEQFHDKITASLSTAMGNPVSIE-KIQGNWDGLHPHLSLSNVR 88

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV------SNW 124
           I  K+       +  +     +L LL+ E+R+  + I++P L       G       +  
Sbjct: 89  ILDKQG-QPALVLPQIETSLSWLSLLAAELRLTRLEIERPTLLIRRDVSGKLYIGSVAVS 147

Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDLNLQISARFLNIISPLSID 183
            +          +   +I V+   I  +D++ +     L+ +NL I   F +    L   
Sbjct: 148 SENNDDDLANWLLHQSRIVVRDAIIVWLDEQRNAPPLVLNRVNLHIENLFSHHQFALRAS 207

Query: 184 -SIKGSVIAEGTGNFDNKRSA---------------FKITANFPAKNKAISLKIQLFPLA 227
            + + +   +  G+F  KR                   + A  P       L      + 
Sbjct: 208 PATELATPLDIRGDFHGKRYGEWKKWRGQVFGQLDYTDMLAWRPWLKLPEELSRGRGAVR 267

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRI 285
             +  D            +      +  +   +    L   A    L   ++I+   + +
Sbjct: 268 AWLSFDKGALTQLTADLIMQDITTRLTDNTPPMNIHFLRGRASWKALENGWEIATDKLSL 327

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319
                  + P            +      L  + 
Sbjct: 328 RLLSGVQLQPTDFYFRTQAASKALASRGELRANL 361


>gi|260221926|emb|CBA30978.1| hypothetical protein Csp_C26250 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 1351

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 93/314 (29%), Gaps = 18/314 (5%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI 58
           + +  L  L   +  V +    +   I     DFR   E QAT  +G ++ + G ++   
Sbjct: 18  LAKWALRVLAMAWLAVGLLWCGLHFVIVPRIADFRPWVETQATQALGLQVRI-GELQARS 76

Query: 59  LPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
               PS+    + +  +E       +  +S       +L   +    +++D P L+   +
Sbjct: 77  NGVIPSIELLRVTVFDREGREALL-LPSVSAALSPRSIL--GLGFEQLHVDSPQLDIRRT 133

Query: 118 SKGVSNW-------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQI 169
             G              +            ++ +  G +   D+  S +      +NL +
Sbjct: 134 LDGKWWIAGLEMATAPTQDGAGADWLFSQAEVALVNGSVTWTDETRSVEPVTFQRVNLVV 193

Query: 170 SARFLNIISPLSIDSIKGS-VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
             R       L  D  +         G F     +           +A +   ++     
Sbjct: 194 RNRLRTHSMRLDADPPEHWGARLSVQGVFRQPLLSRHAGQWTDWDGQAYADFSRVDLAEL 253

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
              +DL   +       ++     V          ++S  +  L+    +    +     
Sbjct: 254 GRYVDL--GVQLARGSGVFRAWVDVVRGTPTGAVADVSLSQVNLTTGPSLEPLALASVSG 311

Query: 289 KLQSILPNSSTDED 302
           +L +   +  ++  
Sbjct: 312 RLGAKALDGGSEFS 325


>gi|255037758|ref|YP_003088379.1| hypothetical protein Dfer_4010 [Dyadobacter fermentans DSM 18053]
 gi|254950514|gb|ACT95214.1| hypothetical protein Dfer_4010 [Dyadobacter fermentans DSM 18053]
          Length = 832

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 88/287 (30%), Gaps = 22/287 (7%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFR--EDFERQATLIVGKKIAVKGGIKIHI 58
           M ++VL  +G +  V       V L+I     +   + +      +   + + G  K   
Sbjct: 1   MFQKVLKVIGIVALVCFFLFGAVELWIYKNREKLFRNAQELINENLNGNLEI-GDFKFRP 59

Query: 59  L---PFPSVFFKDIRIDQ---KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112
                  +    D+++             K E + +  +   + +G+IR+ ++ ++   L
Sbjct: 60  FYGALGLNFTLYDVKLTDTLYNVHHHPFLKAEKIHVALDLKHVFTGDIRIKNLVLEDGGL 119

Query: 113 NFYLSSKGVSNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY--F 161
             +    G SN             K   +      L  +      +   D    + +   
Sbjct: 120 RLFTQKDGYSNLSIFKSGKEKKDSKKGDNDGMVKKLGNVRFANFAVAYSDSVKRKYFGAI 179

Query: 162 LSDLNLQISARFLNIISPL--SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
             D    I     +  + L  S+     +  A+  G    + +   +   +    K + +
Sbjct: 180 FRDATNIIERTDSSTNATLTGSVYFDGLTFNADKGGFLMKQETTLALVLGYDEDEKQLKI 239

Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS 266
              +   A    I + G   +++   ++   F   G   K     L+
Sbjct: 240 YPSILESATHDKIGINGVFDFSDTIKVFHLNFEAKGIAVKDALPLLN 286


>gi|221069808|ref|ZP_03545913.1| conserved hypothetical protein [Comamonas testosteroni KF-1]
 gi|220714831|gb|EED70199.1| conserved hypothetical protein [Comamonas testosteroni KF-1]
          Length = 1370

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 91/291 (31%), Gaps = 27/291 (9%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89
             +R + E  A+  +G  +++           P+    D+ +    + S    +  + + 
Sbjct: 49  EQWRPELESLASRSLGVPVSIGRLHAYRSGLVPTFELGDVVLHDPANKSEALLLPKVVVA 108

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------QRKSTMDMIHNVILEKIH 143
                L++  + V  +Y++ P L     + G                 D        +I 
Sbjct: 109 VSAHSLMT--LGVEQIYLEGPDLTVRRDTDGQIFVAGIAVSSDPGQGGDSDWIFSQPEIA 166

Query: 144 VKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS-VIAEGTGNFD--- 198
           ++GG+++ +D+  +     L D++L +  +  +    L     +G        GNF    
Sbjct: 167 IRGGKLQWVDELRNAAPLQLQDVDLVLRNKRWHHSLRLDATPPQGWGQRFTVMGNFKEPL 226

Query: 199 -----NKRSAFKITANFPAKNKAIS-LKIQLFPLAYPIIIDLFGNLFWNEKQPIYS---- 248
                 +   +   A     +  +S L   L P  + +     G++              
Sbjct: 227 LSVHEGRLERWSGQAYLDFAHIDLSHLGQYLGPQDWKLQ-QGKGSVRAWLDVEHGQPVGA 285

Query: 249 -GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
               +V     +  +         L G  +  + N    ++ +Q +   + 
Sbjct: 286 VADVAVQALQLQWRDRPEPLALQALRGRLRAKNQNGY--QFSVQGLQFTAD 334


>gi|254475502|ref|ZP_05088888.1| hypothetical protein RR11_1339 [Ruegeria sp. R11]
 gi|214029745|gb|EEB70580.1| hypothetical protein RR11_1339 [Ruegeria sp. R11]
          Length = 1188

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 51/360 (14%), Positives = 106/360 (29%), Gaps = 38/360 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTV---PLFIDWTDFREDFERQATLIVG-KKIAVKG-GIKIHI 58
           R +  +   F+++      +     F      RE  ER+    +G   I   G  + ++ 
Sbjct: 79  RGVTVVAVGFALLFGSFVYLGMDTRFNAPDWLRERVERRIEQHLGGLTIEFGGIHLVVNR 138

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
              P V  +D+ +  +      +++          PLL G++R   + +          +
Sbjct: 139 GWRPRVSLRDVTLRDENGAR-VARLADAQASLAMRPLLRGQVRPKSISLSGLFGTLRRGA 197

Query: 119 KGVSNWFQRKSTMDMIHNVILEKI-------------------HVKGGRIKIIDQESDQV 159
            G       +    +     L  +                     +   ++  D    +V
Sbjct: 198 DGSLQLSLAEGEAPLRQAANLADLIEQWESQLELPVLSALISVETEALTLRYEDDRLGRV 257

Query: 160 YFLSDLNLQISA-----RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214
           + L   ++++S          + S LS     GSV A       +K + F I  +  A  
Sbjct: 258 WTLDGGSVRMSRVGQDIDLAGVFSILSGRGYVGSVEANYASAIGSKAAEFGILIDSVASE 317

Query: 215 KAISLKIQ---LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR 271
              +       L PL  PI   L G +  +      S    +     +          + 
Sbjct: 318 DIAAQSAALGWLEPLRAPISGSLRGGVAADGGLLPLSASLQIGEGVIQPTPTARPVPING 377

Query: 272 LSGNFKI--SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
               F        ++ +   + +     S   + + ++   E+  L     G     DLN
Sbjct: 378 AQSYFTYLPDVQELQFNELSVNTG--WGSGAMEGRARLMGVEDGQLT-DLVGQLRFQDLN 434


>gi|167763665|ref|ZP_02435792.1| hypothetical protein BACSTE_02043 [Bacteroides stercoris ATCC
           43183]
 gi|167698959|gb|EDS15538.1| hypothetical protein BACSTE_02043 [Bacteroides stercoris ATCC
           43183]
          Length = 985

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/276 (13%), Positives = 85/276 (30%), Gaps = 25/276 (9%)

Query: 1   MLRRVLIGLGFLFSVV-LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           +L+   I LG L +V  ++ A  +                A   +  K+ +K  +++   
Sbjct: 8   ILKLSGIILGALTAVAGILIAVVLNFIFTSEKLTPIVLEAANRNLNAKLDMK-SVELTFF 66

Query: 60  ---PFPSVFFKDIRIDQKE-------DGSFESKIEGLSMRAEFLPLLSGE-IRVFDMYID 108
              P   V   D  +  K                +        +  L  + I +  + ++
Sbjct: 67  STFPRFGVQLTDGTLVSKAIRDTLWQRTDTLISFKKAVAVVNPMDYLRQQKISIHRLALE 126

Query: 109 QPHLNFYLSSKGVSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESD 157
              +  Y +  G++NW                    I  + + +I ++   + + D+++ 
Sbjct: 127 HADIYAYKNKDGIANWDITVPDTVQSVSSPAGDAMNIDELDIRQISIQHATVTMDDRDTR 186

Query: 158 QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217
               L D +L + A      S L++D    +++    G     R A  +  +        
Sbjct: 187 IFANLWDTDLTLKANMKKGHSMLAVDFRNKNLLFWQDGQLLANRIATHLRTDLELNTARH 246

Query: 218 SLKIQLFPLA-YPIIIDLFGNLFWNEKQPIYSGVFS 252
           SL +    +      + + G +  +           
Sbjct: 247 SLLLHDAMIDINGTKLGVKGTVRRDTAAKALDVDLQ 282


>gi|110833395|ref|YP_692254.1| hypothetical protein ABO_0534 [Alcanivorax borkumensis SK2]
 gi|110646506|emb|CAL15982.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 1273

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/340 (10%), Positives = 86/340 (25%), Gaps = 25/340 (7%)

Query: 6   LIGLGFLFSVVLVGAFTVP--LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           L        +++     V   L +   D+RE  E+     +   + +           P 
Sbjct: 16  LWWTVATVLLLMAAYVVVGRQLMLLVPDYRERLEQIFEKRIQTPLTIAELNGTMSGLVPQ 75

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS- 122
              + IR+   E  +     E +        L   ++ + ++ +    L+      G   
Sbjct: 76  FVARQIRLPAPEGEAPLVLGEVVLSIDVLRSLWHRDLVLEELSVRGVDLSLVRGDDGKIR 135

Query: 123 ----NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE------SDQVYFLSDLNLQISAR 172
               +   +    +      + K+  +   + I D               S+L+  ++  
Sbjct: 136 LRGLDVLGQSDPDNRPPLERILKLFYRQQLLSISDARLSLEWPGMPPLAASELDATMTND 195

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK-ITANFPAKNKAISLKIQL-FPLAYPI 230
                  + +++    +      +          + A+   + +   L   L    A P+
Sbjct: 196 GDEHRLAVRVEARDRPLSLLAKIHLHEDAYTLDQVDADIFTRFEGKRLNEWLPQIDAMPL 255

Query: 231 II-DLFGNLFWNEKQP-----IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
            +  L  ++                   V        +  L      L  +    D    
Sbjct: 256 ELGSLDASVALWGTLQGGEPTSGQLQVDVPALTLFQADTVLPLSGLSLRASLLREDQKAT 315

Query: 285 ISRYKLQSILPNSSTDEDNKTKV---SQDEENLLNFSENG 321
           +S   L    P           +   +Q E        N 
Sbjct: 316 LSLSNLTGNSPTGPLTL-GDMALRWETQGERREWQLRANA 354


>gi|296134970|ref|YP_003642212.1| protein of unknown function DUF748 [Thiomonas intermedia K12]
 gi|295795092|gb|ADG29882.1| protein of unknown function DUF748 [Thiomonas intermedia K12]
          Length = 1313

 Score = 72.6 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/357 (13%), Positives = 100/357 (28%), Gaps = 48/357 (13%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPS 63
           VLI  G     V  G   V    +         R A   +  +  V    K+   P    
Sbjct: 21  VLIVAGLFVFYVAFGYLAVGPLAE-----HYIPRLAQSQLDSRATVG---KVAFDPLHLD 72

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
           +    +++   +     +    L +    + L         + IDQP +N  ++  G  N
Sbjct: 73  LTVDQLQLSTPQGA-PLAGFGKLFVDFAPVSLFRWAWTFHQIRIDQPQVNVAIAQGGAMN 131

Query: 124 WFQ----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY--FLSDLNLQISA 171
           W                 D +  V++E++ + GG ++  D      Y   L+ LN+QI+ 
Sbjct: 132 WDALVRALQRGPKPAKPSDTLPRVVIEQLQIAGGTLRYADANRPHPYATQLTPLNVQIND 191

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
                 +             + T  +        + +   A+   + L      +     
Sbjct: 192 LSTLPKARGQYAISLVLPEQKATLRWKGYVGVNPLVSGGQAELTGLDLAAAARAVP---- 247

Query: 232 IDLFGNLFWNEKQPIYSGVFSV-------------AGDFSKLLNLELSAKKSRLSGNFKI 278
            +L   L            +S               G   + L         +   + K+
Sbjct: 248 -NLSSTLQITSGTASIHAAYSAVQGQQGWLWAINDLGAQIQTLAARAGTAAMQ-WQSLKL 305

Query: 279 SDGNVRISR--YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
               +  ++    +QS+  +  +    + ++             GA+         F
Sbjct: 306 DRAKIDGAKRTVSMQSLSLDGLSAASGRDQLQFHTA-----QLQGAQIDWARQHAGF 357


>gi|148360454|ref|YP_001251661.1| hypothetical protein LPC_2393 [Legionella pneumophila str. Corby]
 gi|296106481|ref|YP_003618181.1| putative protein involved in outer membrane biogenesis [Legionella
           pneumophila 2300/99 Alcoy]
 gi|148282227|gb|ABQ56315.1| conserved hypothetical protein [Legionella pneumophila str. Corby]
 gi|295648382|gb|ADG24229.1| putative protein involved in outer membrane biogenesis [Legionella
           pneumophila 2300/99 Alcoy]
          Length = 513

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/403 (12%), Positives = 114/403 (28%), Gaps = 33/403 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +L ++L+    L   V +  + +   I     ++    + T I  K+  + G I   + P
Sbjct: 3   LLGKILLAFTALMIFVSITLWILAKNIKPETIKQLVSNKITAITHKQSQIDGTISWQLFP 62

Query: 61  FPSVFFKDIRIDQKE-DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P + F  I I  +  + ++   I+ L +  +  PLL G     ++ ID   L     + 
Sbjct: 63  RPGLKFNKIHIGNENLNDNYSLLIDTLLLNLKITPLLKGHFVFSEINIDGLKLFINQENN 122

Query: 120 GVSNWFQRKSTMDMI-----HNVILEKIHVKGGRIKIIDQESDQVYFLSDL---NLQISA 171
                 ++K+              ++K+ +  G+I +  +    V     +      +  
Sbjct: 123 EKPLSSEKKANQYNTTTYPNEQFAIQKLLLSHGQIILNSKGHSTVLKNIQIGAEQFNLKN 182

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
              ++     +        A+   NF   R +   +      +      I+       I+
Sbjct: 183 SPFSVQIKAKLTDAAFLQTAKANINFKG-RVSLSPSIIDELNSGISKSSIEGQLQIQNIL 241

Query: 232 IDLFGNLFWNEKQPIY--SGVFSVAGDFSKLLNLELSAKKSRLSGNF-------KISDGN 282
           ++ F     N     +     F+                    +           +    
Sbjct: 242 LNQFAIKKINTTLKTHKRDIQFNPLTLSLYNGESIGDMDYVIATQQLLINQTATNLDGKQ 301

Query: 283 VRISRYKLQSILPNSSTDEDN--------------KTKVSQDEENLLNFSENGAESMHDL 328
           +  S  K  +I  N                     K  ++  +  + N + +   +   +
Sbjct: 302 LITSLLKHPAISGNLDYSIHASIPLKALSIESLVSKGTITLKDGEVYNINLDQLLNNLKV 361

Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371
                  E     K      D  Q    +   K    + + Q 
Sbjct: 362 KLNSLMTETPDNIKKLTQSADWDQNKNTQGNTKFKLANFKFQL 404


>gi|319787816|ref|YP_004147291.1| hypothetical protein Psesu_2226 [Pseudoxanthomonas suwonensis 11-1]
 gi|317466328|gb|ADV28060.1| putative secreted protein [Pseudoxanthomonas suwonensis 11-1]
          Length = 1344

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/328 (13%), Positives = 91/328 (27%), Gaps = 19/328 (5%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66
               L +V LV      L        +      +   G+ +A    ++       P +  
Sbjct: 35  VAVALIAVALVVGAASQLLPLAERHPDRVAALLSEKAGRPVAFDQ-VRTRWTRRGPLLQL 93

Query: 67  KDIRIDQKEDGSFE-SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
             +RI           ++    +       L       ++ +  P L       G     
Sbjct: 94  DGLRIGGGPGADGGGVQVGQAEVLVSLYAGLLPGRSFTELRLRGPALTLRREDDGRWAIR 153

Query: 126 QRKSTMDMIHNV------ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
                 D            L ++ V GGR+ I   +      +  ++L++      + + 
Sbjct: 154 GLPLADDAPQADPLQHLEGLGELQVIGGRLDIDAPQIGLQARIPRIDLRLRVDQSQVRAG 213

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA--ISLKIQLFPLAYPIIIDLFGN 237
                           +FD  R   ++  +  A + +    L              +   
Sbjct: 214 ARGWIDADGQPLSLALDFDRSRGDGRVYVDLDAASLSAWAPLLEPTGITPQGGSGRIQAW 273

Query: 238 LFWNEKQPIYSGV-FSVAGDFSKLLNLELSA----KKSRLSGN--FKISDGNVRISRYKL 290
                ++ + +   F + G       LE       +   LSG+  +++  G  R+   +L
Sbjct: 274 AELRGRRVVLATTRFELRGLDLAGAPLEGRGRPRQQLPGLSGHVIWRLVAGGWRLDAPRL 333

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFS 318
           Q   P SS   D    ++  E+      
Sbjct: 334 QLQSPGSSQTLDGLL-LAAGEQYAFRID 360


>gi|120611653|ref|YP_971331.1| hypothetical protein Aave_2990 [Acidovorax citrulli AAC00-1]
 gi|120590117|gb|ABM33557.1| protein of unknown function DUF748 [Acidovorax citrulli AAC00-1]
          Length = 1295

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 83/279 (29%), Gaps = 28/279 (10%)

Query: 15  VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74
           V  +    VP  + W       ER  +   G+ + V G +         +   DI +   
Sbjct: 43  VWGLAWLAVPPLVRWG-----LERWGSSFAGRAVTV-GKVDFRPW-TLELTVHDIALAAA 95

Query: 75  EDGSFES-KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR------ 127
             G+    +I  L +  E   L+     +  + ID P L       G  +          
Sbjct: 96  APGAPAQAEIRRLYIDMEVQSLVRWAPVLDALEIDAPRLRVVRGQDGRYDIHDLLQRGAA 155

Query: 128 --KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
              S         L  + ++ G ++  D+ + Q + L+ L L I                
Sbjct: 156 RPGSGGGGGARFALYNLALRDGAVEFADRTTGQTHRLTGLELGIP------FLSNLPADR 209

Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
           + +V      + D         +   ++++    ++++        +DL     +     
Sbjct: 210 QVTVTPRLAFSLDGSTFDTGARSTPFSEDRNTQARLRIRG------LDLSPLRAYWPAGT 263

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                         +  L+    +  + G+ ++S   + 
Sbjct: 264 PLRPQAGTLEAELDIGFLQGPQPRLTVGGHARLSGVRLD 302



 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/260 (10%), Positives = 63/260 (24%), Gaps = 41/260 (15%)

Query: 49  AVKGGIKIHIL--PFPSVF------FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEI 100
            ++  + I  L  P P +          +R+D           + L + A  +  L    
Sbjct: 271 TLEAELDIGFLQGPQPRLTVGGHARLSGVRLDGPPGSGP-VAFQALDIHAASVEPLRKSA 329

Query: 101 RVFDMYIDQPHLNFYLSSKGVSNW-------------------FQRKSTMDMIHNVILEK 141
            +  +    P +     ++G  +W                               V +++
Sbjct: 330 HLVSVEWSGPDIAVRRDARGRWDWAAAAGGAGSARGAPAATPPAGGAGPSSGAWQVAIDR 389

Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARF----LNIISPLSIDSI-----KGSVIAE 192
             V+ G +   D+ + +   ++   +   A+          P  + +       G+  A 
Sbjct: 390 FAVREGHVAWRDESAARTVAMAWDGVHAQAQSLSWPWKGGIPFRLQARMRPAAAGAAQAP 449

Query: 193 GTGNFDNKRSAFKITANFPAKNKAIS----LKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248
            T          +       +   +S         F       I+    + WN       
Sbjct: 450 ATLRVAGTAWPGRGQVAASLRGLPLSAVEAYAAGAFAPQVGARIEADAGVAWNHANGALV 509

Query: 249 GVFSVAGDFSKLLNLELSAK 268
              +        L       
Sbjct: 510 VKVARFAADGVTLACPAGGP 529



 Score = 46.8 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/217 (12%), Positives = 64/217 (29%), Gaps = 18/217 (8%)

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM-------- 133
           + E L +   ++ + +  + V       P L     ++G   +                 
Sbjct: 553 QAERLEIENAWIDVPARTVSVERAVARAPRLRAERDAQGRWMFDAWPRGTAERVPSQEVR 612

Query: 134 ------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187
                   +V L ++ V+ G + + D        L    + + AR L      +  +   
Sbjct: 613 AAGGEVPWSVRLAEVSVERGAVALRDAVPSSPVDLRWSAIALQARGLRWPQAAAGPAAPV 672

Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
            +   G      +R   ++          ++++ +L     P+ + L           I 
Sbjct: 673 QLSLSGQWE-AGRREPGRLAYEGRLTMAPLAVQGRLQAQRLPLHL-LEPYAAPWLNVRIV 730

Query: 248 SGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                  GD         +  K+ + GN  + +  VR
Sbjct: 731 RAEAGFEGD--VDYAATAAGAKATVRGNAALDEVRVR 765


>gi|146308614|ref|YP_001189079.1| hypothetical protein Pmen_3599 [Pseudomonas mendocina ymp]
 gi|145576815|gb|ABP86347.1| protein of unknown function DUF748 [Pseudomonas mendocina ymp]
          Length = 960

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/403 (9%), Positives = 117/403 (29%), Gaps = 37/403 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + L        + L     +   I          +Q   +     +++   ++ + PF
Sbjct: 1   MPKGLKRALSALLITLFLYSLIGFLILPGVALRIANQQLAQLATVPASLQ---RLQLNPF 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    +RI   E        + L    E   L SG + +  + +D        +  G
Sbjct: 58  SLELSLWGLRIGDAE--QEHLGFQRLYANLELDSLWSGALHLAQVELDGARTEVLFAKDG 115

Query: 121 VSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS----DLN 166
             N            Q + +      + ++ +H++   +   D    +    +    D+ 
Sbjct: 116 TLNLTQLFRLPESSAQNEDSDSEPFPLRIDNLHLREKALHFQDLRPSEPVEFAYDSLDVE 175

Query: 167 LQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           L   +      + +++ +     G V  +G  +     S+  +           P    A
Sbjct: 176 LHNLSTLAGDNARMTLTARGPYGGHVDWQGQVSLSPLASSGSLQITDGRLRAFWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL-SGN 275
           + L ++   +       L  +     +        +            +  ++  + + +
Sbjct: 236 LPLVLKEGEVDLSSDYRLDLSKGTELQLSKIKVQLAPFAIDDPSGKPLVRLQRLDIDNSS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335
             ++   V I + + Q +   ++ + D +    +             +      E+  ++
Sbjct: 296 LDLAKQQVVIGQVRSQGLEAWAAREADGQLDWQKLFAKPDTAESEAPKPAAPPGESKPWQ 355

Query: 336 EEEKKNKNDDLK------KDDIQYSVNKKEEKDNSHDKENQEN 372
              +  +  D K          + +V+      +  + ++  +
Sbjct: 356 VLLQDVQLRDYKAHLADRVPQQEVAVDVGPLNLDLKNFDSLGD 398


>gi|301059612|ref|ZP_07200521.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300446258|gb|EFK10114.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 1243

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 91/327 (27%), Gaps = 25/327 (7%)

Query: 3   RRVLIGLGFLFS----VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58
           ++    +G +      ++ V     PL I+      D E +     G +    G I +  
Sbjct: 27  KKFFYWIGGIAGMALLMLFVLLLVAPLLINLDSIHRDIETRFNRETGGQCGF-GKIAVSF 85

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
           LP P              G      + +S+  E LPL  GE R        P +   L+S
Sbjct: 86  LPRPHAVIHQGNCSFP--GEKSLTFKSVSVYPELLPLFKGEFRPSHTRFISPRIIIDLNS 143

Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD--LNLQISARFLNI 176
            G +        +         K  +  G   +ID+    +  + +  L+L I       
Sbjct: 144 AGSNGQALAPFPITN------GKFEMNQGLRDLIDETDGLMIQVEEGLLDLTIGKNQSFR 197

Query: 177 ISPLSIDSIKGSVIAEGTGN-----FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
            + +S+ +           +     F       ++       N A++L          + 
Sbjct: 198 FNNISLSAKHAKGNLILEMDCTSNFFQKLNLKARMELTSYKTNGALTLS---GLKPGQLT 254

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
            +L        +  +        G     L   ++     +          + +   ++Q
Sbjct: 255 GNLQDGNALRLEDGLIDLQTKFEGAGLNSLKAHINLSAPSM--GLSRDQRKITVKGAQIQ 312

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFS 318
             +  ++                +  S
Sbjct: 313 GNMQFNNDSLTAALSDMTLAYPPMRLS 339


>gi|163753966|ref|ZP_02161089.1| hypothetical protein KAOT1_20127 [Kordia algicida OT-1]
 gi|161326180|gb|EDP97506.1| hypothetical protein KAOT1_20127 [Kordia algicida OT-1]
          Length = 1069

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/353 (13%), Positives = 113/353 (32%), Gaps = 36/353 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI---L 59
           +R+L+GL  +  +VL G             + + E+      G+ + + G  ++ +    
Sbjct: 8   KRILLGLILVPILVLGGLILYIQSNQSDIIKGEIEKLNKEHKGR-VTI-GDSELSLFGNF 65

Query: 60  PFPSVFFKDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
           P+ SV   D +I +   ++      +E + +   F  ++ G+  +  + ++    N  + 
Sbjct: 66  PYISVKVYDFQIFETKEDNAPVIMDVEDIYVGFNFWDIVEGKYDIQSLIVEDGVFNIVIH 125

Query: 118 SKGVSNW----FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
               +N          T     N+ L+KI +K   I  +D+ ++        +++     
Sbjct: 126 ENNTTNIQNSLASTSDTETPTTNIHLKKIKLKNLDIHTLDEATNT-------DVEKFIYT 178

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
                      I G +  +   N  ++            K K   +   +    +  I++
Sbjct: 179 GTGGFSQKDSIIAGHIDTDFELNVISEAI-----VPDFMKKKHFEIHTDVEFNQHTGILE 233

Query: 234 LFGN-LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
           +  + +          G      D    LNL +   K         +  +V I   +  +
Sbjct: 234 IQPSGVKMRNADFELKGTIDTKND--VDLNLFIQGTKPNFDMLIAFAPSDV-IPYLEKYN 290

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
              +   +   K   ++                 +   T+ F E   + K  D
Sbjct: 291 NSGDIYFNATIKGPSNKGNRPA---------INAEFGATEAFLENPARRKKID 334


>gi|303256825|ref|ZP_07342839.1| putative ATPase involved in pili biogenesis [Burkholderiales
           bacterium 1_1_47]
 gi|302860316|gb|EFL83393.1| putative ATPase involved in pili biogenesis [Burkholderiales
           bacterium 1_1_47]
          Length = 977

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/403 (9%), Positives = 109/403 (27%), Gaps = 41/403 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + L     +   +                    ++ A  IVG+ I  +   ++   PF
Sbjct: 1   MGKKLWITTGIIGALAAAYTAGGFLGVPYGVNWALKKYAEPIVGRTITTQ---EVKFNPF 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
                 K + + QK+       +  L  +  +  L      V  + ID  +     +   
Sbjct: 58  TLQFSVKGLNV-QKDGEPALLSVGSLQTKVLWDSLFKLSPLVQYITIDGLNSTVIRTGLD 116

Query: 121 VSNW-------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
             N+              + +   D      +  I +    I + D+   +V  ++DLN 
Sbjct: 117 TFNFSDIIQRIQEMPTSPEEEKKDDKPLQFSIGNIKLTNSSITLDDKFRHKVDKVTDLNF 176

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
            +       +     + +   +  +   NF+ +  A    +      K   +   +  L 
Sbjct: 177 ALP------LISNFQNDVDVPITPDLKFNFNGEPFAINAESVPFTPGKKTGVNFTVTGLN 230

Query: 228 YPIIIDLFG---NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG---------- 274
                       N+   +     +          +           ++            
Sbjct: 231 LENAASFNPIPLNVKVTKGTMDCAFNLDFEKKQGEENAYLRLKGTVKMKDVGLEDELGKA 290

Query: 275 --NFKISDGNVRISRYKLQSILPN-SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331
                + + +  +  +       +       N + V   +++ LN  +          + 
Sbjct: 291 YQIIGVKEIDANLKEFAFFRQNLDIGEIQIHNPSVVVIRDKDSLNLVQLLTHI-VKEQKA 349

Query: 332 DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374
              ++ ++  +   L +D+ +   +     D    +    NF+
Sbjct: 350 QAKQDAKEAKEKATLPEDEKKTPNDWTWNIDKVSVRNGMINFT 392



 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/408 (12%), Positives = 110/408 (26%), Gaps = 75/408 (18%)

Query: 18  VGAFTVPLFIDWT---------DFREDFERQATL-IVGKKIAVKGGIKIHILPFPSVFFK 67
            G    P  +D           D      + ++  +     + KG +K+++    S  + 
Sbjct: 437 GGIVITPFSMDLNLQSSGLSIADLTPYISQYSSAHVTQGTFSNKGELKLNLAKDVSFSYS 496

Query: 68  ---DIRIDQKEDGSFESKIEGLSM---RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
              D+      D    + +   ++         L   +I +  + +  P++N  ++  G 
Sbjct: 497 GNADVASLNVTDKQGAAAVSLKNLAVGGISVSGLSPLQISLGTIALTSPNVNVVMNKNGS 556

Query: 122 SNWFQRKSTMDMIHN---------------------------VILEKIHVKGGRIKIIDQ 154
            N     +  +                               + + KI +  GR++  D 
Sbjct: 557 INLASLGTPSNAPAPAATTDKPAASKPQSKAQASSGSSSAPAINVGKITLTDGRVRYTDN 616

Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214
             +  + L+  NL  S    +  +       KG+   +  G  +        T N     
Sbjct: 617 SIEPTFKLNASNLAGSLSNYSTTT-------KGNATVDVKGLLNGTPMNISGTINPFESK 669

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLF---WNEKQPIYSGVFSVAGDFSKLLNL-------- 263
             +++K ++  L+ P               +    Y G F +  D     N         
Sbjct: 670 LKLAMKGEVTSLSLPAFSPFSAKFTGHPIEKGLLTYKGAFDINQDKLTSENALVINKLEF 729

Query: 264 --ELSAKKSRLSGNFKISDGNVRISRYKLQS---ILPNSSTDEDNKTKVS-QDEENLLNF 317
             ++   K  L     +S    R  +  L        +          V           
Sbjct: 730 GSQVPDAKDALPVGLAVSLLQDRQGQIDLNIPVSGSLDDPEFSVGGIIVKVIVNLISKAV 789

Query: 318 SENGAES-------MHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358
           +   A           DLN   F     + ++   +K  +I     + 
Sbjct: 790 TAPFALIGSMFGGEDMDLNNLQFASGSARLDEKT-IKALNIVAKAMQD 836


>gi|78778223|ref|YP_394538.1| hypothetical protein Suden_2029 [Sulfurimonas denitrificans DSM
           1251]
 gi|78498763|gb|ABB45303.1| Protein of unknown function DUF748 [Sulfurimonas denitrificans DSM
           1251]
          Length = 1161

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 117/352 (33%), Gaps = 42/352 (11%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M +++L+ L  +    +VG   VPL ++         +         I +K    I + P
Sbjct: 1   MFKKILLSL--IAFYTVVGFLVVPLLLE-----SQIPKSVAKSTNSNITIK---DISLNP 50

Query: 61  FP-SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           +   +    + +  +E+ +  +  + L +  + LPLL G + V ++    P ++      
Sbjct: 51  YLLELKISGVELRDEEN-NHLASFDSLYIDVKLLPLLKGVLHVKEINFKNPQISLLYDKD 109

Query: 120 GVSNWFQRKSTMDMIH---------NVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168
              N+          +          VI++ + +  G I   D    Q +      ++ +
Sbjct: 110 RTFNFANLVKESADDNSTAKSKNSLRVIVDSLSLSNGIIAYKDFSKPQKFEFIADAISFK 169

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
           ++             S               +     + AN  A N   ++  ++     
Sbjct: 170 LTDIDTK-----DFSSSGAKFRFNSNLQDGGE---IDLRANILALN-PFAVDGRVDIKDA 220

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
            +   ++  +    +  +  GVFS  G        +++A          + + ++ ++  
Sbjct: 221 KLY-SIWKYIQDVLRVEVADGVFSF-GATYNFNIDDINAT--------HVDNIHLTLNDL 270

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKK 340
           +++    N+         +S      +++  +    + D  +     +E+ +
Sbjct: 271 RVKPKDANNDILTLKSLNISDASMKPMDYKVSVKSVVLDSMKVKVERDEKAE 322


>gi|217967202|ref|YP_002352708.1| hypothetical protein Dtur_0813 [Dictyoglomus turgidum DSM 6724]
 gi|217336301|gb|ACK42094.1| conserved hypothetical protein [Dictyoglomus turgidum DSM 6724]
          Length = 479

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/377 (13%), Positives = 117/377 (31%), Gaps = 29/377 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++++ G   LF V+      + L   W   +           GK    +  +K  I P 
Sbjct: 1   MKKLIKGFLILFLVIFSIVILLALTSPW-WAKSLVSYILEKNFGKYAKAE-DVKY-IFPN 57

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             V    + +      S         +       L   +   ++ + +P +    + KG 
Sbjct: 58  -KVEISTLEVANFATFSN--------VSISLQNPLK--LSPINIELTKPKMIIIHNEKGE 106

Query: 122 SNWFQRK----STMDMIHNVILE-KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
             + Q      S  +  +N+ +E K  +K G + + D ++++   +  +N  +  +   I
Sbjct: 107 WTFPQIPGIDTSKSNNANNISIEIKAKIKDGIVVVRDLKTEKDIEVQKVNGNLYWKNQMI 166

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
              +S       + + GT +F  +             +    + +             + 
Sbjct: 167 TYSVSTSINNQEIKSYGTYDFSKEEGNLTFEFKNALADVWAGVFLPNIFYIEKGYFTGWI 226

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
           N   ++   + SG  +      +      + K   +S   KI   N+ I     +  L +
Sbjct: 227 NTKGDKNDWVVSGEINA--FNVEGRIASFTPKFVNVSTKVKIDGENINI--LDGRGNLWD 282

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356
           +      K       +  +N S        +  + +FF+           +    +   N
Sbjct: 283 ADIKFLGKAT----PKPEMNISFES--LNLEKIDKEFFKGSINLRGKAKGEFSISESWEN 336

Query: 357 KKEEKDNSHDKENQENF 373
              +     +K +  NF
Sbjct: 337 AIIKGYIIAEKGSIYNF 353


>gi|90408667|ref|ZP_01216818.1| hypothetical protein PCNPT3_07160 [Psychromonas sp. CNPT3]
 gi|90310213|gb|EAS38347.1| hypothetical protein PCNPT3_07160 [Psychromonas sp. CNPT3]
          Length = 375

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 102/326 (31%), Gaps = 35/326 (10%)

Query: 13  FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71
             ++L+G      FI     +     Q  L +G    +K    I   PF   +  +++ I
Sbjct: 38  LFLLLMGYSLSGFFILPRILKNTLIEQVQLNLGWNTTIK---NIAFNPFLLRLDIEELSI 94

Query: 72  DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW------- 124
           + K     +     LS+  E   L  G     D+ +  P ++  +  KG +N+       
Sbjct: 95  ENKL-KRPQLSFTKLSIDFELRSLFEGAFSFADVRLIDPAIHLIIDKKGNNNFQQALINN 153

Query: 125 ------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY--FLSDLNLQISARFLNI 176
                     +   +I  ++ + I +K G++ I D   ++     +  +N  +       
Sbjct: 154 EKSQKSEDENNKKQIIPPLLFDLIQLKNGQLSIDDHRVNKRLSFKILPINFTLHDFSTRK 213

Query: 177 ISPLSID-----SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
            +  +       +   S+  +G  +     S   +T       K      +  P      
Sbjct: 214 DTKGNYKLALSIAPGESIDWQGDISLQPFSSQGFLTLKGIQAAKFWPYIQEFMPYKLQHS 273

Query: 232 -IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG---------NFKISDG 281
            IDL        +          +    K + L    ++   +           + +   
Sbjct: 274 EIDLKTLYKVKSQDDRLQLQLKNSFITLKNIELADKKQQKTFTKIKQILIGPFRYDLEKQ 333

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKV 307
            + I + K+ ++    + ++  +  +
Sbjct: 334 ILDIKKIKIDALDLQLTRNKKGQLTL 359


>gi|261414472|ref|YP_003248155.1| hypothetical protein Fisuc_0058 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261370928|gb|ACX73673.1| hypothetical protein Fisuc_0058 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326430|gb|ADL25631.1| conserved domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 779

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 55/399 (13%), Positives = 116/399 (29%), Gaps = 48/399 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++ L     +   +++  F V L +     R   E  +  ++G+ I +K    I + PF
Sbjct: 1   MKKPLKITLIVLGSLILLYF-VTLLVAPKIARSYIEEHSKEMIGRSITIK---NISLNPF 56

Query: 62  PSVF-FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             V     + + + +D +     +  SM    L L +  + + D+Y+   ++      + 
Sbjct: 57  TYVLDVDTLAVMEADDKTRFVAFDKFSMNINPLKLFTRTLDISDIYMKALYVRTTQHGE- 115

Query: 121 VSNW------------------------------FQRKSTMDMIHNVILEKIHVKGGRIK 150
             N+                                 +    +   + L  I    G I 
Sbjct: 116 RFNFSDILDFLAQKDSIYYAEHPEEKKVESDSSKSAAEIAAGLPVKLSLRNIVFDKGNII 175

Query: 151 IIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF 210
             D +    + L D ++ I A +L   S     S+K +   +     D   + +      
Sbjct: 176 YQDTKVGSKFHLKDFSINIPAIYLEDNSTGVDVSLKFADGGDLNVKVDANMATYDFNIFL 235

Query: 211 PAKNKAI---------SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261
                A+         S+  + F       I + GN+          G  S+       +
Sbjct: 236 NLNRFALSCIKPYLNDSINYKDFAGYLSAQISISGNINSIL-ASNVKGKVSLDKIDLTEV 294

Query: 262 NLELSAKKSRLSG--NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319
           +      ++   G     + D    I    +     +    +D KT +            
Sbjct: 295 SGSKMGAENVTVGINKANLVDNEYLIDSVIVDGAFAHIDLYKDGKTNIDVLLTPKNKAGS 354

Query: 320 NGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358
               +  D  + +   E  K+   D  K      S    
Sbjct: 355 VTDTTAADSTQVEPVAEAAKQEPADTTKVVADSTSATTT 393


>gi|190575340|ref|YP_001973185.1| hypothetical protein Smlt3472 [Stenotrophomonas maltophilia K279a]
 gi|190013262|emb|CAQ46896.1| conserved hypothetical exported protein [Stenotrophomonas
           maltophilia K279a]
          Length = 1284

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/306 (8%), Positives = 77/306 (25%), Gaps = 17/306 (5%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70
            L  + L+      L        +      +   G+ +             P +  K +R
Sbjct: 23  GLVGLALLVGTLSQLLPLAERHPDRIAAWLSERAGQPVHFDQLQTAWTRRGPLLQLKGLR 82

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
           I   +       I    +       +     + ++ +    L+      G  +      +
Sbjct: 83  IGAGQG----LAIGEAEVLVSMYSGMLPGRSLTELRLRGLALDLQQGKDGRWSVRGLPKS 138

Query: 131 MDMIHNVI----LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186
                 +     L ++ V  GR+ +          L  ++L++      +   +   +  
Sbjct: 139 DTGGDPLDALRRLGELQVIDGRLGVHAPGLGIDTTLPRIDLRLRVNGDRLRVGVRAWAQT 198

Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKN--------KAISLKIQLFPLAYPIIIDLFGNL 238
            ++      + D  R   +        +         A  ++++       + + L    
Sbjct: 199 DALPLTAVLDVDRARGNGQAWLGADPVDFHAWSPLLAAGGVRLREGKGELNLWLTLRDFA 258

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLN-LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297
                         V G     +    L  ++ +    ++       +   +L+    + 
Sbjct: 259 PVALTTDSDLRDVRVDGAPMPDVATPRLQLQRLQARLRWQRQADGWALQVPRLRLKTEDG 318

Query: 298 STDEDN 303
               D 
Sbjct: 319 EQQLDG 324


>gi|330504818|ref|YP_004381687.1| hypothetical protein MDS_3904 [Pseudomonas mendocina NK-01]
 gi|328919104|gb|AEB59935.1| hypothetical protein MDS_3904 [Pseudomonas mendocina NK-01]
          Length = 960

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/403 (9%), Positives = 122/403 (30%), Gaps = 37/403 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + L        + +     +   I          +Q         +++   ++ + PF
Sbjct: 1   MPKGLKRALSALLIAVFLYSLIGFLILPGIALRIANQQLAQYAAVPASLQ---RVQLNPF 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    +RI   E G  +   + L    +   L SG + + D+ +D        +  G
Sbjct: 58  TLELSLWGLRIG--ESGQEQLSFQRLYANLQSDSLWSGALHLSDIELDGARSEILFAKDG 115

Query: 121 VSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS----DLN 166
             N            + K+       + ++ I ++   ++  D    +    +    DL 
Sbjct: 116 TLNLTQLFRLPQTQAEPKAENSEPFPLRIDSIRLREKALRFQDLRPSEPVEFAYDSLDLE 175

Query: 167 LQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           L   +      + +++ +       +   G  +     S+  +  +        P    A
Sbjct: 176 LHNLSTLAGDNAQMTMTASGPHGARIDWRGQVSLTPITSSGSLNVSDGRLSTFWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL-SGN 275
           + L ++   +       L  +     +        +            +  ++  + + +
Sbjct: 236 LPLVLKEGQVDLSSDYRLDLSSGTELQLSKVKVQLAPFAIDDPQGKPLVRLQRLDIDNTS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335
             ++   V + + + Q +   ++ + D +    +      +     AE+    +E+  ++
Sbjct: 296 LDLAKQQVVVGQVRSQGLEAWAAREADGQLDWQKLFAKPESAKSETAEAAEQPDESKPWQ 355

Query: 336 EEEKKNKNDDLK------KDDIQYSVNKKEEKDNSHDKENQEN 372
              +  +  D K          + +V+      +  + ++  +
Sbjct: 356 VLLQDVQLRDYKARLADRVPQQEVAVDVGPLNLDLKNFDSLGD 398


>gi|153009591|ref|YP_001370806.1| hypothetical protein Oant_2261 [Ochrobactrum anthropi ATCC 49188]
 gi|151561479|gb|ABS14977.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
          Length = 1132

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 105/331 (31%), Gaps = 36/331 (10%)

Query: 6   LIGLGFLFSVVLVGAFTVPLF-IDWTDFREDFERQATLIVGKKIAVK-GGIKIHILPFPS 63
           ++ +  L  +++   F +    +D    R++ ++    I+G+  +   G   + +     
Sbjct: 34  ILSICILLVLIVGAGFVILRSGVDSNLLRDEAQKSLMHILGEGASASIGSAALSLDQDSH 93

Query: 64  VFFK--DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL--------- 112
           V  +  D+ I   + G   S I+ + +    LPLL+G++RV  + +D             
Sbjct: 94  VALEARDVSIADPKQGVEISGIKSVRLGLAPLPLLTGKVRVAQLEVDGVSFEMPETKGPG 153

Query: 113 ---NFYLSSKGVSNWFQRKSTMDMIHNVILEKIH--------VKGGRIKIIDQESDQVYF 161
              +      G+ ++      +       LE +         +    +     +  QV  
Sbjct: 154 FWKSLPYDEHGIVDFDAVSGELFAAMRRSLELLRAQDTHVIGIFNSTVAFKVGDEQQVLD 213

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAE------------GTGNFDNKRSAFKITAN 209
           +    L  +   ++I   +     K ++  +               N  +   A      
Sbjct: 214 IEQARLIENGGKIDIAGSVIWKGKKIALDGKIDRHAGDNSLAGFELNVRDIPVALGSPPE 273

Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK 269
                    +    F L     + L G+    ++    +   +V G   +L  +E     
Sbjct: 274 VSPVINGNRVNPAHFELEASARLSLTGSAADGDRPERLATELAVDGIDMQLGKVEDVRGG 333

Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTD 300
            RL+    +    + I   +LQ     +  +
Sbjct: 334 IRLNLEHTVGSRKIEIKSSRLQLGGMQAQFN 364


>gi|189459425|ref|ZP_03008210.1| hypothetical protein BACCOP_00048 [Bacteroides coprocola DSM 17136]
 gi|189433882|gb|EDV02867.1| hypothetical protein BACCOP_00048 [Bacteroides coprocola DSM 17136]
          Length = 1101

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 96/288 (33%), Gaps = 30/288 (10%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLF-IDWTDFREDFERQATLIVGKKIAVKGGIKIHI- 58
           +L+   I  G L  ++L+       F    +       + A   +  K+ +K  +++   
Sbjct: 120 ILKIAGISFGSLIVLILIAITVAINFVFTPSRLTPVVLKTANQALNAKLEMK-SVELTFF 178

Query: 59  --LPFPSVFFKDIRIDQK-------EDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYID 108
              P   +   D  +  K       +            +    +  L + +I +  + ++
Sbjct: 179 STFPRFGLKLVDGSLVSKVFCDTAWQKTDSLLSFGKCVVVVNPIDYLINKKITLNYLGLE 238

Query: 109 QPHLNFYLSSKGVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQES 156
              +  Y S +G++NW                   D+   + + ++ +K   +   D+++
Sbjct: 239 DASVYAYKSREGIANWDIVASDTTAVADTASSGKTDLSGGIDIRRVSLKRANVIFDDRDT 298

Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA--EGTGNFDNKRSAFKITANFPAKN 214
                L++  L ++A      S L++     +V+   +G    +   +  K + +     
Sbjct: 299 RVYARLTNAALNLTASLQKEHSKLAMRFSNDNVLFWQDGQLLVNKVATDLKTSLDLDRST 358

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWN--EKQPIYSGVFSVAGDFSKL 260
           + ++L          I  D+ G L  +   +       +++     + 
Sbjct: 359 RTLTLN-DANISLNGITFDVKGTLKRDTVRRALNVDIAYALHAPSLET 405


>gi|254487324|ref|ZP_05100529.1| conserved hypothetical protein [Roseobacter sp. GAI101]
 gi|214044193|gb|EEB84831.1| conserved hypothetical protein [Roseobacter sp. GAI101]
          Length = 1100

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/418 (11%), Positives = 111/418 (26%), Gaps = 53/418 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKI---AVKGG---IK 55
           ++  L  LG +  V  V    + +        +  E +    + + +    +      + 
Sbjct: 1   MKWSL--LGIVLVVGAVAGTAIYMIRSPIVIPDWIEAKLEARLAQDLPQARIVFDELVLI 58

Query: 56  IHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +     P V  +D+RI         +    +        +L G+++  D+ +        
Sbjct: 59  VDEGWRPRVRLQDVRITNPAGAE-LAAFREVRASFSVRGMLDGKVQPRDIALSGVVATLR 117

Query: 116 LSSKGVSNWFQRKSTMD--------------------MIHNVILEKIHVKGGRIKIIDQE 155
               G                                      L  I ++   +   D  
Sbjct: 118 RDRDGRVALSASTGQAPAERRAATMPELIGQLDAALATPALSRLRSIDLRALTLSYTDLR 177

Query: 156 SDQVYFLSDLNLQISARFLNIISPLSID-----SIKGSVIAEGTGNFDNKRSAFKITANF 210
           S++ +      L+++     +     +      +   ++ A  T    +  S F +T + 
Sbjct: 178 SERAWTADGGRLRLTRSGETLGISADLALLGGGADVATLSANYTSKLGDTASQFGVTFDG 237

Query: 211 PAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG--DFSKLLNLEL 265
            A             L  L  PI   +  +L  +      +    +             +
Sbjct: 238 VAAEDIGAQNPAFAWLRVLRAPISGSVRSSLNEDGAFEPLNATLQIGQGVVQPNAKAAPI 297

Query: 266 SAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL-NFSENGAES 324
                R   ++  ++  +R     +Q      S   +    +  D+   L N       S
Sbjct: 298 PFDGLRSYFSYDPNEKLLRFDELSVQ--SEWVSGRIEGAASLGVDDSGKLANLVAQMRLS 355

Query: 325 MHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDN-----SHDKENQENFSGDK 377
             + N  D +       K   ++  D+   +               D++   N SGD 
Sbjct: 356 NLEANPADVY------AKPISIEGADVDVQIAFNPFHLTLGRMDISDRDTTLNVSGDL 407


>gi|148239098|ref|YP_001224485.1| hypothetical protein SynWH7803_0762 [Synechococcus sp. WH 7803]
 gi|147847637|emb|CAK23188.1| Conserved hypothetical protein [Synechococcus sp. WH 7803]
          Length = 1476

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/330 (11%), Positives = 98/330 (29%), Gaps = 16/330 (4%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           + +R+ + L     V +     V         R D E Q    +G  +++     + +  
Sbjct: 14  IAKRLAVALIGGGVVWIAADRVVASVF--ERLRPDLEEQVGKPLGHPVSIGAYRGLSL-- 69

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    I++ +       + ++ L++    L  L     V  + +    L+   + +G
Sbjct: 70  -RGITVGPIKVQRGRRDQSTASVQQLTVGLNPLASLQRLRPVVTVGVKGAQLDLRRNPQG 128

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                  +        + L+       R++I       +      ++++     ++   +
Sbjct: 129 AYWVLGPQPKGGKPPRLDLDVRLTDSARLQIA-PAGLALRAAGRTSVRLDEHRADVSLQV 187

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
           ++   +G +  +G G +                 +   L     P+     +     L W
Sbjct: 188 ALP-DRGRITLQGRGRWVRPELQLSTRLERIRLERYQGLLPAQLPVQLRGQLGGDLRLGW 246

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-----GNFKISDGNVRISRYKLQSIL- 294
            + Q   SG  S+ G       L+ + +  +L          I         Y+      
Sbjct: 247 RQGQANCSGGVSLVGVEVSGEPLDQTLRSKQLKVSCRGNALTIPTSAWVYGNYRADLGGQ 306

Query: 295 --PNSSTDEDNKTKVSQDEENLLNFSENGA 322
              N + D     +    ++  + F   G 
Sbjct: 307 VRLNRAFDLRGGLR-ELGKDRTVAFRLLGD 335


>gi|88809580|ref|ZP_01125087.1| hypothetical protein WH7805_00210 [Synechococcus sp. WH 7805]
 gi|88786330|gb|EAR17490.1| hypothetical protein WH7805_00210 [Synechococcus sp. WH 7805]
          Length = 1478

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/271 (11%), Positives = 83/271 (30%), Gaps = 7/271 (2%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFID--WTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           +  GLG +     V        +   +   R D E Q    +G  +++     + +    
Sbjct: 14  LFTGLGAVLIGGAVVWVAADRIVSAVFERLRPDLEEQVGKPLGHPVSIGSFQGLSL---R 70

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            +    I++ +       + ++ L++    L  L     V  + +    L+   + +G  
Sbjct: 71  GITVGPIKVQRGRRDQSTASVQQLTIGFNPLASLQRLRPVVTVGVKGALLDLRRNPQGAY 130

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                         + L+   +   R+++       +      ++++     ++   +++
Sbjct: 131 WVPGPLPKGGKPPRLDLDVRLMDPARLQVA-PAGLALRAAGWTSVRLDENRADVSLQVAL 189

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242
              +G +  +G G +                 +   L     P+     +     L W +
Sbjct: 190 P-DRGRITLKGRGRWVRPELQLSTRLERIRLERYQGLLPAKLPVQLRGQLGGDLRLGWRQ 248

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLS 273
            Q   SG  S+         L+   +  +L 
Sbjct: 249 GQANCSGGISLVDVEVSGQPLDQPLRSKQLK 279


>gi|254515597|ref|ZP_05127657.1| AsmA family protein [gamma proteobacterium NOR5-3]
 gi|219675319|gb|EED31685.1| AsmA family protein [gamma proteobacterium NOR5-3]
          Length = 620

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/319 (14%), Positives = 103/319 (32%), Gaps = 48/319 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R VL  LG    ++++    VPLF+D     +    +     G  + V G   + + P 
Sbjct: 1   MRIVLWLLGIPAVLLVLAVLLVPLFLDEKALVDIAAERIKAQSGAILTVSGDTSLSLFPK 60

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN-------- 113
            ++  +D+ ++  +  +     + LS     +PL    + V  + ID   L         
Sbjct: 61  VALAARDVSLELPDSQTQVV-AKSLSAGVALMPLFRSSVEVDSIKIDGLTLTTEAADEEA 119

Query: 114 ---------------------FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII 152
                                    ++  +      S + +   + + ++ +   R+  +
Sbjct: 120 AKAVAIDTATLSNSELDEFYALRSKARTQAQSEAAASVLAVPLALEVGEVSLSNIRVITV 179

Query: 153 DQESD-------QVYFLSDLNLQISARFL--NIISPLSIDSIKGSVIAEGTGNFDNKRSA 203
           D +         +    SDLNL      L  +II P   ++    +   G    D     
Sbjct: 180 DSQGKPISELQLRQLTASDLNLDGRPVPLTIDIIIPSGNEAPPMEIALAGEFRTDLNAET 239

Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL 263
             +         +++++I       P+ + L G +  + +    S               
Sbjct: 240 LSL--------DSLNVRITGATAD-PLTLGLSGKVALDTQIADLSLQLQTGKLKGSGTVR 290

Query: 264 ELSAKKSRLSGNFKISDGN 282
             S +  ++  N  +++ N
Sbjct: 291 YASFESPQIDANLALTELN 309


>gi|167618782|ref|ZP_02387413.1| hypothetical protein BthaB_20902 [Burkholderia thailandensis Bt4]
          Length = 842

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 84/305 (27%), Gaps = 35/305 (11%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V   ++ I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISNLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERHADGSLFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSI---- 185
                 +  E I ++GG ++  D + D     L  + + +    +     L   +     
Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAPELALKGIRIAVLNDGIVHRIALQAPANGTLF 224

Query: 186 KGSVIAEGTGNFDNKRSAFKIT--------ANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
            G +               K +        +  P     ++  + +   AY   ID    
Sbjct: 225 HGPLDFRARFVHKALAPIGKPSNWTGDAYLSTGPVDLPTLARYVNIRLTAYAGRIDNAIW 284

Query: 238 LFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKSRLSGNFKISDGN---VRISRYKL 290
             + +     +G   + G    L        L    +R   +  I       + +SR   
Sbjct: 285 AHFGDGHLYSAGG-ELRGYDVALRVRPTQPRLDIPVARFGWDLAIDPKRDYTLHLSRLHA 343

Query: 291 QSILP 295
           +   P
Sbjct: 344 ELGQP 348


>gi|330815609|ref|YP_004359314.1| hypothetical protein bgla_1g06660 [Burkholderia gladioli BSR3]
 gi|327368002|gb|AEA59358.1| hypothetical protein bgla_1g06660 [Burkholderia gladioli BSR3]
          Length = 1420

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/328 (13%), Positives = 95/328 (28%), Gaps = 42/328 (12%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           R VLIG   L+ V       +   +       R   E   +  +  ++ +       + P
Sbjct: 29  RVVLIGGATLYFVAAGSYLGLRYALLPQVDKLRPRIESFVSDKLHAEVRIA-----RLAP 83

Query: 61  -----FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
                 P V    + I  K+       I   +    +  L+     +  + +D P L   
Sbjct: 84  HWSGMQPGVDVTALTIRGKDG-VTALTIPHATAAISWRSLVRLSPTLSSLVVDAPDLLIA 142

Query: 116 LSSKGVSNWFQRK--------STMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166
               G  +             +       +  + I ++ G ++  D E D     L+ + 
Sbjct: 143 RRRDGTLSIAGVDVPTTRKGGNDAFSTWLLRQQAIVLREGTLRWRDAERDAPELTLTGIR 202

Query: 167 LQISARF----LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT--------ANFPAKN 214
           L +        L + +P +   + G +            +  +          +  P   
Sbjct: 203 LAVLNDGLVHRLALQAPANGTLLAGPLDFRARFTHKPLAAIGRPANWTGDAYVSTGPVDL 262

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKS 270
             ++    L   AY   ID    + + +   +     S++G    L        L    +
Sbjct: 263 PTLARYAPLPLKAYAGRIDNTIWIGFRDG-RLLDAHGSLSGADVALRVRPTQPRLDIPVA 321

Query: 271 RLSGNFKISDGN---VRISRYKLQSILP 295
               +  ++ G    +++S    +   P
Sbjct: 322 GFGWDLALAPGRDYTLKLSNLHAELGQP 349


>gi|218437452|ref|YP_002375781.1| hypothetical protein PCC7424_0447 [Cyanothece sp. PCC 7424]
 gi|218170180|gb|ACK68913.1| protein of unknown function DUF490 [Cyanothece sp. PCC 7424]
          Length = 1887

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/344 (9%), Positives = 111/344 (32%), Gaps = 26/344 (7%)

Query: 2   LRRVL--------IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           L+R+L        I +G     +++G+      +      +  E+  +  + +++ +   
Sbjct: 16  LKRLLQTAKQPKAIAIGITSLTLIIGSSVGFRIVMTQTLPQTIEKTLSDALNREVKLGKV 75

Query: 54  IKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113
               +     +      I +      +  IE +  +   L +L        + +   +  
Sbjct: 76  ENYSL---THLKIGFSSIPETPKHLNQLTIENIDAQFNPLLILLQGRLPVKITLSNLNGY 132

Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS---DLNLQIS 170
                +G  NW   +     +   +     +K   +++      +   +      N    
Sbjct: 133 IKQDQQG--NWTIDRIEKIKLPIDLDASFEIKNADLQLQPSGKAKPVTVELDGKGNYLEL 190

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL--KIQLFPLAY 228
            +   +    ++  +   +  +G       ++  ++     A  +  SL     L     
Sbjct: 191 NQQQQLGYDFTVALLNSQIHLKGNTRLPTGKTEAELKIEKLALPEIASLIPHFPLQINQG 250

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
            +  ++   +          G  +++ +     N +L  +  ++  NF + D  + I ++
Sbjct: 251 QLNTNVNIEVPSLTNIENSQGQGNISLNNLTATNNQLK-QPIKIVANFALQDTQLIIQKF 309

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-DLNET 331
           ++      + ++     + + D +  L+ + N       D+++T
Sbjct: 310 QI------NWSEIKANIQGNLDWKKGLDLAVNLQSFNLSDISKT 347


>gi|302037203|ref|YP_003797525.1| hypothetical protein NIDE1873 [Candidatus Nitrospira defluvii]
 gi|300605267|emb|CBK41600.1| conserved exported protein of unknown function, DUF748 [Candidatus
           Nitrospira defluvii]
          Length = 982

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/388 (11%), Positives = 107/388 (27%), Gaps = 49/388 (12%)

Query: 3   RRVLIGLGFLFSV-VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  LI L  +  +  L+G    P        +          +   + +     + I PF
Sbjct: 8   RTALIVLCGIVVLYALLGFVVAPY-----AVKTYAIPALAERLRHPVVLG---DVRINPF 59

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             +V      + + +  +     E L +  E   L+       ++ +  P    ++ + G
Sbjct: 60  TFAVTLTAFEVREPD-QTPMLGFEELFVDFEGTSLVRSAYLFDEIRLTLPFGLVHMQADG 118

Query: 121 VSN-----------------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
             N                     K+    +  V +  + ++ G I+  D    +   + 
Sbjct: 119 TLNLLGLVPPASDSPADPAPPADVKAEKAPVPPVEIRLLSIRQGVIEYRDDSKRKPVTID 178

Query: 164 DL-------NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK- 215
            +       N        N  +  +      ++  EGT + D   S   ++ +    N  
Sbjct: 179 VVPIEITLRNFGTRRGGENAYAFSAEFGEGETLAWEGTVHLDPLESDGHVSLSNVKLNTF 238

Query: 216 --AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS---GVFSVAGDFSK---LLNLELSA 267
             ++  + +   L+  +++D   +   +          G F ++          +  +S 
Sbjct: 239 WPSLRDRFRFDILSGAVLVDARYHFDTSVAPVNLQVNEGKFVLSDFRLSAAGDRDPVISV 298

Query: 268 KKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
                 G    +      +    L      +   ED    +    + L     +  E   
Sbjct: 299 PALAFEGIRMDLHKREAGVETIALSGTEIRAWLAEDGVVNL----KPLFTPVASSPEVPV 354

Query: 327 DLNETDFFEEEEKKNKNDDLKKDDIQYS 354
           +         +        ++    Q +
Sbjct: 355 EPQRPAADPGQPWSVDVQAIEVSKAQVA 382



 Score = 37.2 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 28/286 (9%), Positives = 78/286 (27%), Gaps = 31/286 (10%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            +   ++ +              L +    L +   ++++ ++    P + F  +  G +
Sbjct: 495 RLGVNNLHVADGVSAQEFLGWTALGLNKVSLEVAPTKVKIGEIAWRDPAIRFVTAKDGTT 554

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
           N  +                      +    + +        + + ++   L+ +S + I
Sbjct: 555 NLSRVMKAPAGGA---------AQPPVSKPVEATAPKKATPPIPIDVNVVQLSKLSAMFI 605

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242
           D     V+  G  +        K  ++       ++L   +  +A    + + G +    
Sbjct: 606 DESIEPVVTTGIQDLSG---TIKGLSSKQIAKAEVALTGTVDEVA---PLKIQGQINPLS 659

Query: 243 KQPIYSGVFSVAGDFSKLLNLELS--AKKSRLSGNFKIS------------DGNVRISRY 288
           +       F   G     ++             G   +             +  V + + 
Sbjct: 660 EDTYTHLTFLFKGVDLTAVSPYAGKYVGYPITKGKLSLDLMYQVSKQQLVGENKVLLDQL 719

Query: 289 KL-QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
              +      +T    +  V   ++       +      DLNE DF
Sbjct: 720 TFGEKTNSPDATSLPVRLAVGLLKDRRGRIDIDMP-VRGDLNEPDF 764


>gi|313158507|gb|EFR57901.1| conserved hypothetical protein [Alistipes sp. HGB5]
          Length = 895

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/399 (12%), Positives = 116/399 (29%), Gaps = 33/399 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKG-GIKI-HI 58
           M+++ +     + +VVLV A   P+ +      E  +R+A  ++  ++  +   I +   
Sbjct: 1   MMKKFVKIAAIVVAVVLVIALVAPMVLR-GKIAEIVKREANAMLDARLDFEKLDISLLRH 59

Query: 59  LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFY 115
            P  S+  K + +  +E   G      + +S+    + L   E   V  + + +P L+ +
Sbjct: 60  FPRASLDLKGLTLVGEEPFAGDTIVAAQRISVVVNVMSLFGDEGFEVTKIILSEPALHAH 119

Query: 116 LSSKGVSNWF-------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
             + G  NW                         + +    +    I+  D  +   +  
Sbjct: 120 KLADGRVNWDVVKASEEAQGEEETPADAEPSSFRLSVRDFRISDAAIRYEDDSTGMRFST 179

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTG--NFDNKRSAFKITANFPAKNKAISLK 220
           + L+L++        + L +      +     G        +           N   +  
Sbjct: 180 APLSLRLRGDMSADQTDLDLRLTAKGMRLVSGGIPMLSGAEAELDAVIAADLANSRFTFS 239

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR----LSGNF 276
            Q       I + L G +   +                K +   + A  +R    L+   
Sbjct: 240 -QNKLRLNAIEVGLDGWVELKDDAVAMDVTAGCDKVQFKDVLSLVPAFYTRDFRNLAAGG 298

Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEE 336
           ++S         +  ++       E                + +G      +       +
Sbjct: 299 ELSMALWARGEMRGAALPAFELRTEVRNGSFQYSSLPK---AVDGINIDVRIANPGGVAD 355

Query: 337 EEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSG 375
           +       DL K  ++ + N       + +  +   F  
Sbjct: 356 KT----EIDLSKFTLRMAGNSLSASAYATNLVSDPTFRA 390


>gi|91776097|ref|YP_545853.1| hypothetical protein Mfla_1744 [Methylobacillus flagellatus KT]
 gi|91710084|gb|ABE50012.1| conserved hypothetical protein [Methylobacillus flagellatus KT]
          Length = 1284

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 65/237 (27%), Gaps = 17/237 (7%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKG-GIKIHILPFPSV 64
           L+    +   ++V +    +  +  D+RE    + +  +G+ + +K           P +
Sbjct: 16  LLWFAIIAFSIIVLSLRYLVLPNIGDYREHIAGKVSEALGQTVTIKQLHASWS-GLNPHL 74

Query: 65  FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124
             +DI I   E        E +     +L +L  E R+  + I  P L+    + G    
Sbjct: 75  SLRDIDIYDAE-QRVALSFEHIEASLSWLSILLLEPRLSSLVIHDPALSIRRDTDGTLYI 133

Query: 125 F-----QRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNIIS 178
                            +    I V    I   D         L  L+L I     + + 
Sbjct: 134 AGIATNGPSRPEFANWLLRQASIDVSNATITWHDDLRQAPPLRLEKLHLHIENPAWSSLV 193

Query: 179 --------PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
                    +   +  G +   G     +            A      +      L 
Sbjct: 194 GHHRFGLQAIPSVAASGLIDIRGNLYGKDVSKPDTWRGTLYAHADGTDIAAWNQWLP 250


>gi|254524223|ref|ZP_05136278.1| conserved hypothetical protein TIGR02099 [Stenotrophomonas sp.
           SKA14]
 gi|219721814|gb|EED40339.1| conserved hypothetical protein TIGR02099 [Stenotrophomonas sp.
           SKA14]
          Length = 1281

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/279 (8%), Positives = 74/279 (26%), Gaps = 10/279 (3%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70
            L  + L+      L        +      +   G+ +             P +  K +R
Sbjct: 23  GLVGLALLVGSISQLLPLAERHPDRIAAWLSERAGQPVRFDQLQTAWTRRGPLLQLKGLR 82

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
           I   +       I    +       L     + ++ +    L+      G  +      +
Sbjct: 83  IGAGQG----LAIGEAEVLVSMYSGLLPGRSLTELRLRGLALDLQQGEDGRWSVRGLPQS 138

Query: 131 MDMIHNVI----LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186
            +    +     L ++ V  GR+ +   +      L  ++L++      +   +   +  
Sbjct: 139 TNGGDPLDALRRLGELQVIEGRLGVHAPDLGIDTTLPRIDLRLRVNGDRLRVGVRAWAQA 198

Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
            ++      + D  R   +        +      +     A   + +  G L        
Sbjct: 199 DALPLTAVLDVDRVRGNGQAWLGADPVDFHAWSPLLAAGGAR--LREGKGELNLWLTLRD 256

Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
           ++ V        + + ++ +          ++     R+
Sbjct: 257 FAPVALTTDSDLREVRIDGAPMPDVAVPQLQLQRLQARL 295


>gi|253991172|ref|YP_003042528.1| hypothetical protein PAU_03698 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782622|emb|CAQ85786.1| conserved hypothetical Protein [Photorhabdus asymbiotica]
          Length = 1270

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 46/342 (13%), Positives = 103/342 (30%), Gaps = 25/342 (7%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61
           VL+    +  +++    +   F+      +R     +   I+G  + V G I      F 
Sbjct: 9   VLLATAAIVIIIVALLVSGLRFLLPHINSYRPQLLAKVESIIGVPVDV-GYITGEWESFG 67

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS--S 118
           P +  +DI +          K + +++  +    LL       D+   Q  +N++    +
Sbjct: 68  PVLELRDISVKTASAD---VKAKKITVALDIWLSLLRMRWNFRDLTFYQLQVNYHQPLFN 124

Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFL 174
               N F +  T   +     +  +++  R+  +    ++       L+ LN     R  
Sbjct: 125 DQSGNMFSQSDTFSDLFLEQFDHFNLQDSRLTFLTPSGERADLLLPRLTWLNKNNRHRAQ 184

Query: 175 NIISPLSIDSIKGSVIAEGTG-NFDNKRSAFKITANFPAKNKAISLK--IQLFPLAYPII 231
             IS  SI++  G+V  +    +         I       +    L   +Q         
Sbjct: 185 GEISLSSINNQHGNVQVKFDLHDTHGVLDNGTIYLQADNVDVHPWLSHWLQDNTGLKDAE 244

Query: 232 IDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
             L   +   + +               K+ +   +   S L    +  D        +L
Sbjct: 245 FSLSSWIMLKDGRIDGGQLQLRQGEANWKVADKLHNLSVSDLVLRMRRQDNGWLFDVPEL 304

Query: 291 QSILPNSSTDEDNKTKV-------SQDEENLLNFSENGAESM 325
            S++ +       K  V       + D ++         +  
Sbjct: 305 TSLVTDGQQWPSGKASVLYLPEAKNYDNKDHWRIRAENIQLE 346


>gi|91788733|ref|YP_549685.1| hypothetical protein Bpro_2872 [Polaromonas sp. JS666]
 gi|91697958|gb|ABE44787.1| protein of unknown function DUF748 [Polaromonas sp. JS666]
          Length = 1364

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/276 (12%), Positives = 76/276 (27%), Gaps = 37/276 (13%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID---------------QKEDGS 78
              E+ A+  +G+++ V G +         +   D+ I                 +   +
Sbjct: 58  SQLEKIASEKLGRRVTV-GQVDFKPW-SLELTLNDLVIAKTSPAGATTPVTAGSAQAGAA 115

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--------RKST 130
            +  I+ + + AE   LL        + + +P  +     +G  +               
Sbjct: 116 PQLTIKRIYIDAELESLLRLAPVADAIVVQEPAASLTYLGEGRYDIDDILDRFKASAGEV 175

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                      + + GG++  IDQ   + + L DL L +                +    
Sbjct: 176 PGEPPRFAHYNLELNGGQLDFIDQSVSKTHVLRDLQLTVP------FLSNLKSQREIKTA 229

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250
                  +  R          A+ +    +  L         DL   L +      +   
Sbjct: 230 PHLAFRLNGSRFDTAAVGTPFAQTRKTDARFTLSG------FDLSPYLAYWPASLPFRLQ 283

Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
            +V    +K+   +      R+SG        +  S
Sbjct: 284 SAVLHADAKVAFEQTPDAVVRISGTATAEKVRLLTS 319


>gi|313683655|ref|YP_004061393.1| hypothetical protein Sulku_2534 [Sulfuricurvum kujiense DSM 16994]
 gi|313156515|gb|ADR35193.1| hypothetical protein Sulku_2534 [Sulfuricurvum kujiense DSM 16994]
          Length = 1080

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/357 (12%), Positives = 106/357 (29%), Gaps = 42/357 (11%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIV-GKKIAVKGGIKIHILPF-PSVFFKDIRIDQK 74
           + G F VP        +     +      G +++++        PF   +  K++     
Sbjct: 19  VAGFFGVPYL-----LKNSVPEKVNEATKGGRLSIE---SASFNPFTFHMKLKNVSFKTP 70

Query: 75  EDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKGVSNW--------F 125
           ++      ++  S+  + L  L  G + V D+ + +P +      KG  N+         
Sbjct: 71  QNSD-LFALKAFSINVDPLDYLWRGGLVVRDLSLREPTVTVRRDEKGDFNFKWLTELGGD 129

Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS------DLNLQISARFLNIISP 179
             +        +I+  + +K G I   D    + Y L       +L+        N    
Sbjct: 130 SEEDKSLEPPKLIIRHLAIKNGTINYSDYSEGKAYTLDIGPVGFNLDHVDLRNLSNKNGK 189

Query: 180 LSIDSI---KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
           + + +     G +   G  +     S   I  N    +  +    + F   +PI +   G
Sbjct: 190 MRLYATINEGGFIDFSGKLD---ALSPLNIRGNVAFNSGKLYTPWRYFKDKFPIEV-ADG 245

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
              +       S   +     +    ++      +             +S  +L+     
Sbjct: 246 TAAFGFDYRFNSNDLNATELSNLYFGIDKLRIIPKGENR-----NLFTLSALRLKKGDVF 300

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMH----DLNETDFFEEEEKKNKNDDLKKD 349
                 N   +S +  ++  +     +       D  +  F  +E K ++  +    
Sbjct: 301 PMKKVFNAETLSVNGVDVSVYRSQEGKIDWLTYIDEIQKAFPSDENKTSEPWNFSLG 357



 Score = 37.6 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 35/322 (10%), Positives = 103/322 (31%), Gaps = 28/322 (8%)

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
           +    + + +K D S  + ++G+++    +       +V  + + QP + F   S G  +
Sbjct: 403 LTSGALSVIRKRDQSLSAGLDGIAVDGITIDRARKFAQVQKISVLQPSIAFKRLSDGSID 462

Query: 124 --------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF--LSDLNLQISAR- 172
                     +  S+ +      +++++V  G +  +D+   +     L  LN+ +    
Sbjct: 463 LSYHAYAAPSRSSSSSETPWGYRIDELNVSNGSVGFVDEVPHKKVTANLDRLNMSVRGFE 522

Query: 173 -FLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITA-NFPAKNKAISLKIQLFPLA 227
               + S LS  S    K ++  +      ++R+   +             ++   +   
Sbjct: 523 SDPGVKSSLSFSSRLNEKSTIDLKSDIVRSSQRAKGTVELKGMDVSLADPYIEPSTYASL 582

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAG---DFSKLLNLELSAKKSRLSG-NFKISDGNV 283
               + L G   +   +   +G  S++    + ++  ++ L   K   +   +   D  +
Sbjct: 583 RRGSLSLLGTYDYRPSRTSINGKISLSDWVVNDTRDNSVLLGWDKIGATPFVYAYPDNRL 642

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343
           +I++  +     N          +   +    +      +   +  +         +   
Sbjct: 643 KINQLSIDGFYTN--------ALIDSKKVLNYSTLSKNPKGDANTTKKSGGNPFGLEIVK 694

Query: 344 DDLKKDDIQYSVNKKEEKDNSH 365
             L      +S         S+
Sbjct: 695 LLLHNSSANFSDLSLPLPFKSY 716


>gi|221066079|ref|ZP_03542184.1| protein of unknown function DUF748 [Comamonas testosteroni KF-1]
 gi|220711102|gb|EED66470.1| protein of unknown function DUF748 [Comamonas testosteroni KF-1]
          Length = 1297

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 102/312 (32%), Gaps = 49/312 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LRR++  +  L  + L+    VP        +   E++A   +G+ + V    KI   P+
Sbjct: 10  LRRLIWSVLALLLLWLLLWALVPWV-----AKSQLEKRAAEKLGRGVHVG---KIEFAPW 61

Query: 62  -PSVFFKDIRIDQK--------------------EDGSFESKIEGLSMRAEFLPLLSGEI 100
             S+   D+ ID+                          + +I+ + + A    L     
Sbjct: 62  AMSITLHDLVIDKATKKVAVTADAEGVSAHKDLNSAAEPQLEIKRIFINASAQSLFRLAP 121

Query: 101 RVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKII 152
            +  + +D P +     S G  +                    +  L  I ++ GR+++ 
Sbjct: 122 VLDAIEVDAPVVRLTQHSLGKLDIDDVIARLMEPDDEEPAKPVSFALYNIALRDGRVELN 181

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212
           D+   + + L DL L I                +  V+     + +  +      +    
Sbjct: 182 DESVQRKHELKDLQLSIP------FISNLASKREIKVLPHLAFDLNGSKFDTSGESTPFT 235

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
            ++  ++ ++   +     +   G +  +      SG+        ++   E      R+
Sbjct: 236 DSRQTAMHLKWEHIDLTPYL---GYVPASVPVQPLSGMLDT---DLQVSFEEKDQPVVRI 289

Query: 273 SGNFKISDGNVR 284
           SG   +S+  ++
Sbjct: 290 SGKLALSEVALQ 301



 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 91/308 (29%), Gaps = 25/308 (8%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82
           +PL       +  F  Q + ++     +  G    +     +    +++  K+     ++
Sbjct: 484 LPLQWLQPYVQAHFTPQLSAMLNTDARISWGEGGVVAEVTELTADKLQLQDKQAPVNIAQ 543

Query: 83  IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS---NWFQ------------R 127
           I+   ++ +       +++V  + + +P L     ++G      W               
Sbjct: 544 IKVSGVQVDLAA---RQVQVEAIAVQKPQLAALRDAQGRWMYERWLPAAVPAARSTSQGA 600

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187
           K+      +V L  I V GG ++  D    Q      + L +SA  + + +   + +   
Sbjct: 601 KTEPGQPWSVKLAAIAVDGGALQFRDAAPVQGRSAQPVQLDVSALRVRLGAFEPLAAKAA 660

Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL---FGNLFWNEKQ 244
               E +      R        F        +  Q    A  + +     +     N   
Sbjct: 661 PTPLEVSAQLSANRRVQAGQIQFKGLLGLTPVSAQGQLQARAVPLHALEPYFAHKLNVDL 720

Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
               G F    ++           +  +SG+ +++D  VR +            +     
Sbjct: 721 VRADGNFRGRLNYLAHAK----GPQVSVSGDVELNDLRVRSTLAAPVQEEAGKPSTAKGA 776

Query: 305 TKVSQDEE 312
                ++ 
Sbjct: 777 LTAVLNDS 784



 Score = 47.6 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/290 (8%), Positives = 82/290 (28%), Gaps = 52/290 (17%)

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
           +   ++ +  ++        + L ++ + +  L  ++ +  +   +P ++   +++GV N
Sbjct: 293 LALSEVALQDRQGA-PLLSFDALEVQLQNVQPLQNQMALETVRWVKPEVHVSRNAQGVIN 351

Query: 124 W-------------------------------FQRKSTMDMIHNVILEKIHVKGGRIKII 152
           W                                  K+       V +++  ++GG +   
Sbjct: 352 WLGLNAPAVAPAAPLEKAGPEPASVEASNPAQANAKAQKPNPLVVGVQQFDIEGGIVHWQ 411

Query: 153 DQESDQVYFLS----------------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196
           D  +                       +  L + A              + S+  EG   
Sbjct: 412 DAATGAAPAALTLAPLTLQARSLAWPMNEALHLKASAGVQAGGQPQAQEEASLAVEGEAT 471

Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAG 255
               + + K+        +        F      +++    + W E   +      +   
Sbjct: 472 LKAGKLSLKLEQLPLQWLQ--PYVQAHFTPQLSAMLNTDARISWGEGGVVAEVTELTADK 529

Query: 256 DFSKLLNLELSAKKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDNK 304
              +     ++  + ++SG    ++   V++    +Q     +  D   +
Sbjct: 530 LQLQDKQAPVNIAQIKVSGVQVDLAARQVQVEAIAVQKPQLAALRDAQGR 579


>gi|217969639|ref|YP_002354873.1| hypothetical protein Tmz1t_1218 [Thauera sp. MZ1T]
 gi|217506966|gb|ACK53977.1| conserved hypothetical protein [Thauera sp. MZ1T]
          Length = 1341

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 86/297 (28%), Gaps = 21/297 (7%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R+   L  ++ V+ VG   +   +     + R          +G  +A++  I+     +
Sbjct: 51  RLSDALLLVWCVLAVGVLVLRHLVLPAVGELRVPIAELLGERLGVAVAIE-RIEGGWAGW 109

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            P +    + +   +       +  +     +  L   E     + I  P L      +G
Sbjct: 110 RPRLRLAGVSLSDAQG-RPALTLPEIDATLAWSSLAMLEPHFHRLEIRAPDLLVRRDPEG 168

Query: 121 VSNWF-------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172
             +                +   +   +I + G R+   D+     V  L ++  ++  R
Sbjct: 169 ALHVAGIALAHGDEGGDGGLGWLLAQRQILIHGARLAWADEARGAPVLELEEVEFRLDRR 228

Query: 173 FLNIISPLSI---DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
                  L      ++       G     +     +       +    +L      +  P
Sbjct: 229 TRPARFALEARLPAALGERASLRGELRRIDPLRPQRFAGRLYVELGRTALGNWRPWVDLP 288

Query: 230 IIIDLFGNLFWN-----EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281
             ++  G L              +   ++ G  + L       + +RL G  +++ G
Sbjct: 289 FGLEGEGALQAWLDADGRGGHALTADLALDGVRAVLGEDLPVLELARLDGRVELARG 345


>gi|94970321|ref|YP_592369.1| hypothetical protein Acid345_3294 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94552371|gb|ABF42295.1| hypothetical protein Acid345_3294 [Candidatus Koribacter versatilis
           Ellin345]
          Length = 514

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/381 (11%), Positives = 110/381 (28%), Gaps = 36/381 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           + +L+    +  V    A  V     W   + +  R+     G ++ + G       P P
Sbjct: 11  KWLLLCCAVILLVTAGTALYVAP--RWPYRKAELIRRLEDATGSRVEI-GRFHQTFFPHP 67

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY---LSSK 119
               +++ +   +    +  ++ +++   +  L+  E  +  + ++   + F      S 
Sbjct: 68  GCVAENLTLTNSDPAHPKITVQKVTVSGLYSGLIGSEKHIRMLSLEGMRIAFPPQNPESS 127

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIID---QESDQVYFLSDLNLQISARFLNI 176
           G  N   R   + +   +  +++  +  +I       ++  + + + D+ L+  A    I
Sbjct: 128 GGQN-DVRPQRVGVPSGIKFDQVEARNSQIVFARKNPEKEPRTFAIYDVILKSFAPGEAI 186

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
                +            G F                   +  +  +          L G
Sbjct: 187 HFNAVLRIPVPPAEVNVDGVFGPL-------TGDAIGKAQLKGRFTMKNADLSKFHALMG 239

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR----LSGNFK--ISDGNVRISRYKL 290
            L    +   + G        +     +   K +     L+ +F   +   N  +    +
Sbjct: 240 TLSAQGQ---FEGQLEGLTVNATTNVPDFGTKATHHTIPLNTDFTAVVDGTNGDVQFQPV 296

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350
            ++L  +      K     +E        NG      +   +   ++          K  
Sbjct: 297 HALLGETKLIATGK----LEEVP----DANGKRLTLHIASQEARIQDLMVLFTH--SKPP 346

Query: 351 IQYSVNKKEEKDNSHDKENQE 371
           +Q +           DK+  E
Sbjct: 347 LQGATRFDMSVQLPPDKKPFE 367


>gi|59714020|ref|YP_206795.1| putative ATPase involved in pili biogenesis [Vibrio fischeri ES114]
 gi|59482268|gb|AAW87907.1| putative ATPase involved in pili biogenesis [Vibrio fischeri ES114]
          Length = 1017

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/390 (9%), Positives = 109/390 (27%), Gaps = 45/390 (11%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R     L        +    VP        ++    Q + ++ + + +     +   PF
Sbjct: 19  IRWSTYALSAYLLYAALFGLLVPYI-----AKQQIPEQLSKLIERPVTLA---DVTFNPF 70

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
              +      I   E  +   + E   ++  F   + +  I V  + +D+P+++    + 
Sbjct: 71  TLQLDLHQFSIQDAESSTSFVRFENAGVKVNFWKSIFNAAISVEYIALDKPYVDIERLND 130

Query: 120 GVS------------------------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE 155
                                      +  +       +  V++++  +  G ++  D  
Sbjct: 131 TEQLVFNFNDILSAVARNLASEEKVEPSIEEPIDRHKALFPVLIKQTRLAQGHVRFFDGV 190

Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215
           ++      D+N  + +     +   +    +  +      +        ++         
Sbjct: 191 TETELVYPDINFTLGSFSTQSLLTNTEYKNEYRLQIT-DADSGKVELKGQVQLKPLEVVG 249

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
            I ++    P  +   I+             +S  + VA         + +   +   G 
Sbjct: 250 DIHVQKIELPRLWGF-IEKDIIAKLTSGNVNFSSNYHVA-QTIGDTESDDTMSITTDEGV 307

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK-VSQDEENLLNFSENGAESMHDLNETDFF 334
           F ++  N       + S+    S         V +    + + +  G +    +++    
Sbjct: 308 FSVNHLNFNAEDKSIVSLP---SFSVKGIATNVEKQTVTIASVTSQGLQVSAKVDDKGAD 364

Query: 335 EEE----EKKNKNDDLKKDDIQYSVNKKEE 360
                  +   +     KDD   +  K  E
Sbjct: 365 LVNLFTPKFIAEAPKEHKDDSVETEPKSTE 394



 Score = 39.9 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 77/285 (27%), Gaps = 36/285 (12%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            V    + I   +      K   L++      L   ++ +  + + QP+    ++    +
Sbjct: 524 GVQVNHLSIRDNKLRKPFVKWRSLAVNKFDFDLQKSKLAIDTLSVSQPYARVVINKDRST 583

Query: 123 NWFQR--------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
           N                  K        + + KI    G     D          + +  
Sbjct: 584 NIGDLIVAQPKAKKSKSTTKKKGQKPFALSVRKIAFNNGSAFFADNS-----LTPNFSSG 638

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
           I     NI    SI   K +V   G           K   N   K   + L +    +  
Sbjct: 639 IEQLKGNIGHVSSIPGTKATVDISGNIE-KYAPVKVKGEINPLLKQPYLDLDVVFKSVEL 697

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
             +    G         I  G  ++A        L    + ++L G   +    +++ + 
Sbjct: 698 TTVNPYSGTYA---GHYIDKGQLTLA--------LNYQLENNQLKGENHVIIDQLQLGKA 746

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
               +  +   +         D    L    +G     D+N+ +F
Sbjct: 747 SDSDLATSLPLELAIALLQDNDGVIDLGVEVSG-----DVNDPEF 786


>gi|332291457|ref|YP_004430066.1| outer membrane assembly protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169543|gb|AEE18798.1| outer membrane assembly protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 893

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 55/381 (14%), Positives = 117/381 (30%), Gaps = 36/381 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI 58
           +++ L   G +  V+++     P       FR   E      +   +  +     + + +
Sbjct: 1   MKKALKITGIILLVIVILLVASPFL-----FRGKLEGLLKKTINNNLNAQVEWSSLDLSL 55

Query: 59  ---LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSG----EIRVFDMYIDQ 109
               P  +V   D  +       G   +  + L +      L        I +  + + +
Sbjct: 56  FRSFPDATVIVNDFTVINNAPFAGDTLASGKELRIEMGVTQLFKNTTDEPIAIDALSLLE 115

Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHN---------VILEKIHVKGGRIKIIDQESDQVY 160
            +++  + S G +N+   K T                 L++  +   +I   D+ +    
Sbjct: 116 ANVHVQVDSLGNANYDIVKQTPTTETTTEESSEPFVFNLQEYSLIDSKIIYDDRSTQTHL 175

Query: 161 FLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
            L+++N   S  F  I S L   +    S    GT   D      +       + +  + 
Sbjct: 176 ELTEVNHTGSGDFSAIESELDTKTHAVVSFDYGGTHYLDGHELDLEAVIQMELEKQKYTF 235

Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKI 278
           K +       + ++  G +   E   +    F   + DF   L L     ++ L G    
Sbjct: 236 K-ENLAKINELPLEFNGFVELLEDGNLMDLSFKTPSSDFKNFLALIPKEYRANLDGVETS 294

Query: 279 SDGNVR--ISRYKLQSILPNSSTDE-DNKTKVSQDEENLLNFSENGAESMHDL-NETDFF 334
            D  V   I     ++ +PN   +   N       +        N       + N+T   
Sbjct: 295 GDFRVSGIIKGKTTETNIPNLDIEIVSNNASFKYPDLPK---RMNNINIDVKIKNDTGIT 351

Query: 335 EEEEKKNKNDDLKKDDIQYSV 355
           E    +  +   K D   ++ 
Sbjct: 352 ELTYIEINDLRFKIDQDTFTA 372


>gi|325281809|ref|YP_004254351.1| hypothetical protein Odosp_3212 [Odoribacter splanchnicus DSM
           20712]
 gi|324313618|gb|ADY34171.1| hypothetical protein Odosp_3212 [Odoribacter splanchnicus DSM
           20712]
          Length = 1029

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 76/261 (29%), Gaps = 30/261 (11%)

Query: 21  FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL---PFPSVFFKDIRI------ 71
             +             E+ A   +  ++   G I++      P   +   D  +      
Sbjct: 30  IVIHFIFTPAKLTPLVEKTAKEYLNAEVHF-GNIELTFFSTFPDFGIQLDDASVISGTFR 88

Query: 72  -----DQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
                 +         I+   +    +  L    I V D  ++QP +  Y+ S GV NW 
Sbjct: 89  DSTANSEPTMQDSLMNIKSCLLTINPIAYLTKNRIVVKDFVLEQPEIYAYVDSAGVPNWD 148

Query: 126 QRKSTMDMI-------------HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
             +   D                 + L  + ++ GR+   D+ +     L+ +NL +   
Sbjct: 149 ILRIAADTTTVDTTMADTTTFDSGIRLRNVRIRNGRLVFDDRNTRLYTRLTGINLGVDGY 208

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA-YPII 231
                S L +D    +V+    G     R AF I         ++   ++   +    I 
Sbjct: 209 LGKRRSRLKLDFSTENVLFWQEGQLLVNRLAFGIETGMKINRDSLLYTLEKAVVDVNGIR 268

Query: 232 IDLFGNLFWNEKQPIYSGVFS 252
               G L  +           
Sbjct: 269 FGAGGTLRGDTVNHTLLVNLK 289


>gi|149278093|ref|ZP_01884232.1| membrane spanning protein, required for outer membrane integrity
           [Pedobacter sp. BAL39]
 gi|149231291|gb|EDM36671.1| membrane spanning protein, required for outer membrane integrity
           [Pedobacter sp. BAL39]
          Length = 526

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 20/270 (7%), Positives = 73/270 (27%), Gaps = 15/270 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI--- 58
           +++     G      L+    +  ++       + ++     +  ++  +    +     
Sbjct: 1   MKKAFKIFGITLI-SLLFLLLIIPYLLPKTISNEVKKWVNQSIKGEVEFE-STSLSFFRH 58

Query: 59  LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
            P  +    +  +              + LS   +   + S ++++ ++++D+  +N  +
Sbjct: 59  FPSLTFSLHNFTLKGSAPFQQDTLLHTKELSFGVDLSTVFSDQVKIEEIFVDEADINIEV 118

Query: 117 SSKGVSNW-------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
             KG +N+                   + ++ I +    +   D+    +     L+   
Sbjct: 119 DEKGNANYNVYESKDNPSVKKDSSQTAIKIQGIFINKSNLVYNDRSIPMMISAKGLSYAG 178

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI-QLFPLAY 228
                N I  L   +   ++             +            ++ L   +      
Sbjct: 179 EGDLSNEIFDLKSKADIDTINVYYNKTPYLLHKSLNAKLVTKINTNSLDLLFNENDLKIN 238

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFS 258
            + I   G   + +     +          
Sbjct: 239 SLPIRFKGKFSFLKDGYDINFKTQAKETDL 268


>gi|326317114|ref|YP_004234786.1| hypothetical protein Acav_2307 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323373950|gb|ADX46219.1| protein of unknown function DUF748 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 1314

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 77/261 (29%), Gaps = 24/261 (9%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES-K 82
           P  + W       ER  +   G+ + V G +         +   DI +     G+    +
Sbjct: 52  PPLVRWG-----LERWGSSFAGRAVTV-GKVDFRPW-TLELTVHDIALAAAAPGAPAQAE 104

Query: 83  IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ--------RKSTMDMI 134
           I  L +  E   L+     +  + ID P L       G  +                   
Sbjct: 105 IRRLYIDMEMQSLVRWAPVLDALEIDAPRLRVVRGQDGRYDIDDLLQLGAARPGGGEGGG 164

Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
               L  + ++ G ++  D+ +DQ + L+ L L I                + +V     
Sbjct: 165 GRFALYNLALRDGAVEFTDRTTDQTHRLTGLELGIP------FLSNLPADRQVTVTPRLA 218

Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PIIIDLFGNLFWNEKQPIYSGVFSV 253
            + D         +   ++++    ++++  L   P+       +    +         +
Sbjct: 219 FSLDGSTFDTGARSTPFSEDRNTQARLRIRGLDLSPLRAYWPAGVPLRPQAGTLEAELDI 278

Query: 254 AGDFSKLLNLELSAKKSRLSG 274
                    L +     RLSG
Sbjct: 279 GFLQGPEPRLTVGGHA-RLSG 298



 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/310 (10%), Positives = 84/310 (27%), Gaps = 45/310 (14%)

Query: 49  AVKGGIKIHIL--PFPSVF------FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEI 100
            ++  + I  L  P P +          +R+D     +     + L + A  +  L    
Sbjct: 271 TLEAELDIGFLQGPEPRLTVGGHARLSGVRLDGPPGSAP-VAFQSLDVHAASVEPLRRSA 329

Query: 101 RVFDMYIDQPHLNFYLSSKGVSNW------------------FQRKSTMDMIHNVILEKI 142
            +  +    P +     ++G  +W                              V ++++
Sbjct: 330 HLASVEWSGPEIAVRRDAQGQWDWAAAAGAGGAQGAPRATPAASGAGPSSGAWQVAIDRV 389

Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202
            V+ GR+   D+ + +   ++   +Q  A+ L+          K  +             
Sbjct: 390 AVREGRLAWRDERAARPVAMAWDGVQAQAQSLSWPW-------KDGIPFRLQARMQPAAH 442

Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262
                +   ++   +   +++   A+P    +  +L      P+ +     AG F+    
Sbjct: 443 GATSRSG-ASEAGEVPATLRVAGTAWPGRGQVAASLR---GLPLSAVDGYAAGAFAPRAG 498

Query: 263 LELSAKK----SRLSGNFKISDGNVRISRYKL---QSILPNSSTDEDNKTKVSQDEENLL 315
             + A      +  +G               L         + + E  +T          
Sbjct: 499 AVIDADAGVAWNHDNGALVAKVARFVADGVTLACPAGGSCAAPSAEAGRTPAGPGTPPGA 558

Query: 316 NFSENGAESM 325
                  E  
Sbjct: 559 WVQAERLEIE 568



 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 68/238 (28%), Gaps = 19/238 (7%)

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PS                  + E L +   ++ + +  + V       P L      +G 
Sbjct: 541 PSAEAGRTPAGPGTPPGAWVQAERLEIENAWIDVPARAVSVERAVARAPRLRAERDVQGR 600

Query: 122 SNWF---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
             +                 R +  D   +V L ++ V+ G + + D        L    
Sbjct: 601 WMFDAWLRQGEADRAPPREARSAGGDAPWSVRLGEVAVESGAVALRDAVPASPVDLRWSA 660

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
           + + AR +         ++   +   G      +R   ++          ++++ +L   
Sbjct: 661 IALQARGVRWPQAAGGPAVPVQLSLSGQWE-AGRREPGRLAYEGRLTMAPLAVQGRLQAQ 719

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
             P+ + L           I        GD         +  K+ + GN  + +  VR
Sbjct: 720 QLPLHL-LEPYAAPWLNVRIVRAEAGFEGD--VDYAATAAGAKASVRGNAALDEVRVR 774


>gi|224825314|ref|ZP_03698419.1| putative transmembrane protein [Lutiella nitroferrum 2002]
 gi|224602235|gb|EEG08413.1| putative transmembrane protein [Lutiella nitroferrum 2002]
          Length = 1274

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/301 (10%), Positives = 87/301 (28%), Gaps = 23/301 (7%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64
           VL+  G +       AFT     +   +R +     +   G+ + ++      +   P +
Sbjct: 21  VLLAGGSVVLAAAFAAFTFWFLPNLEQYRAELASLLSRQTGRVVTIRQLQGQWVGVAPQL 80

Query: 65  FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG---- 120
               + +    DG+     E +S+   +  LL    R   + +D P ++      G    
Sbjct: 81  DLYGVTMANPRDGA-ALSFERVSLTPAWRSLLVWSPRFAHIVVDGPVVDLSRGHDGVIYL 139

Query: 121 ------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARF 173
                      +          +    + +   R+   D       + L     + S+  
Sbjct: 140 NGFDISSGGAGRTGDGSAANWWLNQPSLVINNARLSWQDDLLGLPRFRLDKGQAEFSSDL 199

Query: 174 LNIISPL---SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                 +      ++  ++        D+ R+  +         + + +        +  
Sbjct: 200 FGHGLKITGQPSAALGRAIALSAQWRGDDVRTWKEWQGELRVDWQGVKVS------PWSR 253

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDF--SKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
            +  +G +   E   ++   FS          + L+ +A     +G   +     ++   
Sbjct: 254 YLKQWGGVRSGEGDGVFQVAFSQGRIDRLKANVALKNAAYAPTDAGELNVPKLGGQLEVV 313

Query: 289 K 289
           +
Sbjct: 314 R 314


>gi|58696956|ref|ZP_00372447.1| conserved hypothetical protein [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58536807|gb|EAL60035.1| conserved hypothetical protein [Wolbachia endosymbiont of
           Drosophila simulans]
          Length = 893

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 51/393 (12%), Positives = 117/393 (29%), Gaps = 55/393 (13%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--- 78
               F DW+ +R+   ++       K+ + G +++ ++  P +   ++ +   E+     
Sbjct: 66  VAATFKDWSGYRQYIIKELEKTYDAKVHIGGKVEVSLI-TPKLTIYNVYVQYNENKEQKL 124

Query: 79  -FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV 137
                +  + +R  FL L    ++   + +     N         N     +T    + V
Sbjct: 125 SDLISVRKIEIRPSFLSLFLFSLQPKSITLFGMKSN-------KENLINIINTKASGNTV 177

Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197
            +    +K  ++      +D       +N++  A   N      +     +    G  + 
Sbjct: 178 DI---VIKDSQVSFKSDFADI------VNIKEVAVKKNRQFSGKVKVGDNNYDFSGKVDI 228

Query: 198 DNKRSAFK---------ITANFPAKNKAISLKIQLFPLAYPIIIDLFG------NLFWNE 242
             K               T N   +    +L + +   +  +            +     
Sbjct: 229 TKKNVHISVESNFVNLLFTGNRNQEELQGNLTLTINNSSGSVSDLAKIINLSFLSHVIPS 288

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS------DGNVRISRYKLQSILPN 296
           +    S   S+        +L++ +K  + SG  +        + N+  S+  L SI  +
Sbjct: 289 ENIKISSNISLNESEFTATDLKIDSKSMQASGTIQNDRKGNHTNFNISFSKVDLDSIQND 348

Query: 297 SSTDEDNK-------TKVSQDEENLLNFSENG---AESMHDLNETDFFEEEEKKNKNDDL 346
           S    + K         V ++     N   +       + D         + K   N  L
Sbjct: 349 SQRTMNMKDLLECFRAVVPKNLSLNFNMEASNIQYQNKILDNFRAVLKSTDGKVKVNTLL 408

Query: 347 KKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
           K   I    N         +      F+GD ++
Sbjct: 409 KFPGI---NNISYLSGEISNNNVLSEFNGDLLV 438


>gi|197336906|ref|YP_002158516.1| putative ATPase involved in pili biogenesis [Vibrio fischeri MJ11]
 gi|197314158|gb|ACH63607.1| putative ATPase involved in pili biogenesis [Vibrio fischeri MJ11]
          Length = 1017

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/397 (10%), Positives = 108/397 (27%), Gaps = 51/397 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R     L        +    VP        ++    Q +  + + + +     +   PF
Sbjct: 19  IRWSTYALSAYLLYAALFGLLVPYI-----AKQQIPEQLSKFIERPVTLA---DVTFNPF 70

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
              +      I   E  +   + E   ++  F   + +  I V  + +D+P+++    + 
Sbjct: 71  TLQLDLHQFSIQDAESSTSFVRFENAGVKINFWESIFNAAISVEYIALDKPYVDIERLND 130

Query: 120 GVS------------------------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE 155
                                      +  +       +  V++++  +  G ++  D  
Sbjct: 131 TEQLVFNFNDILSAVARNLASEEKVEPSIEEPIDRHKALFPVLIKQTRLAQGYVRFFDGV 190

Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215
           ++      D+N  + +     +   +    +  +      +        ++         
Sbjct: 191 TETELVYPDINFTLGSFSTQSLLTNAEYKNEYRLQIT-DADSGKVELKGQVQLKPLEVVG 249

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
            I ++    P  +   I+             +S  + VA         + +   +   G 
Sbjct: 250 DIHVQKIELPRLWGF-IEKDIIAKLTSGNVNFSSNYHVA-QTIGDTESDDTMSITTDEGV 307

Query: 276 FKISDGN--------VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
           F ++  N        V +  + +  I  N          V+      L  S    +   D
Sbjct: 308 FSVNHLNFNAEDKSIVSLPSFSVNGIATNVEKQTVTIASVTSQG---LQVSAKVDDKGAD 364

Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364
           L      +      +     KDD   +  K  E   S
Sbjct: 365 LVNLFTPK---FIAEAPKEHKDDSVETEPKSTEVSQS 398



 Score = 39.9 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 77/275 (28%), Gaps = 26/275 (9%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            V    + I   +      K   L++      L   ++ +  + + QP+    ++    +
Sbjct: 524 GVQVNHLSIRDNKLRKPFVKWRSLAVNKFDFDLQKSKLAIDTLSVSQPYARVVINKDRST 583

Query: 123 NWFQR--------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
           N                  K        + + KI    G     D          + +  
Sbjct: 584 NIGDLIVAQPKAKKSKSTTKKKGQKPFALSVRKIAFNNGSAFFADNS-----LTPNFSSG 638

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
           I     NI    SI   K +V   G           K   N   K   + L +    +  
Sbjct: 639 IEQLKGNIGHVSSIPGTKATVDISGNIE-KYAPVKVKGEINPLLKQPYLDLDVVFKSVEL 697

Query: 229 PIIIDLFGNLF---WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
             +    G       ++ Q   +  + +  +  K  N  +   + +L G    SD    +
Sbjct: 698 TTVNPYSGTYAGHYIDKGQLTLALNYQLENNQLKGEN-HVIIDQLKL-GKASDSDLATSL 755

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQD-EENLLNFSE 319
                 ++L ++    D   +VS D  +   +   
Sbjct: 756 PLELAIALLQDNDGVIDLGVEVSGDVNDPEFSLGA 790


>gi|260060600|ref|YP_003193680.1| outer membrane assembly protein [Robiginitalea biformata HTCC2501]
 gi|88784730|gb|EAR15899.1| outer membrane assembly protein [Robiginitalea biformata HTCC2501]
          Length = 915

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 95/331 (28%), Gaps = 42/331 (12%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK------- 55
           +++L  +  +   +L+    +PLF++               V +  ++ G          
Sbjct: 4   KKLLKIVAGILVFLLLLVIGIPLFLE-----AKIGPILRSNVNR--SITGDFDFREADLS 56

Query: 56  -IHILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE---IRVFDMYIDQ 109
            I   P   V  +DI +       G    K     +      L  G    I + ++++  
Sbjct: 57  LIRNFPNARVSLRDITLTTAAPFEGDTLFKAREAYLVMGIGELFKGAGEPIGIRELFVSG 116

Query: 110 PHLNFYLSSKGVSNWFQRKSTM--------DMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
             L   L ++   N+                      L+   +   +I  +DQ S   + 
Sbjct: 117 ADLRLRLDAEERPNYLVAAEDPAATGATAASDGFTFDLQGYQIADSKISYMDQSSGISFL 176

Query: 162 LSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
           L D+    S       S L   +    S+  +     D              +    +  
Sbjct: 177 LEDIQHTGSGDLSLAESRLETRTDARISLGMDSVQYLDRNSLQLDARIGIDLETDTYTF- 235

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL------LNLELSAKKSRLSG 274
           ++   L   + +   G++   E+       F       K            S ++ R SG
Sbjct: 236 LENEGLINQMPLVFEGSVQLVEEGQEIDLDFRTPSSDFKNFLALIPEAYSKSLEEVRTSG 295

Query: 275 NFKISD------GNVRISRYKLQSILPNSST 299
            F +         + RI    ++    +++ 
Sbjct: 296 QFTLEGSITGRSDDTRIPNLDIRMEAVDAAF 326


>gi|74318164|ref|YP_315904.1| hypothetical protein Tbd_2146 [Thiobacillus denitrificans ATCC
           25259]
 gi|74057659|gb|AAZ98099.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 1169

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/339 (13%), Positives = 103/339 (30%), Gaps = 44/339 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGI---KIHI 58
           LR++ + L  L    L   + V  F       +   ++    +G+   +   +   ++  
Sbjct: 8   LRKIALSLPTLIVAGLFVLYLVTGFF----LVDPLAQKLLPWIGED-KLASRLSARRVTF 62

Query: 59  LP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
            P       + +++ +K      +  E L +  +   L     R+ D+ + QPH    + 
Sbjct: 63  NPLTLEATVEGLKLAEKSGA-PLASFERLYLDLDSTGLFRWAWRIRDIDLVQPHATVEVR 121

Query: 118 SKGVSNWFQ--------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV---------- 159
             G  NW           K   + +  ++++ I +  GR+   D                
Sbjct: 122 RGGTLNWAALIARLREDEKPPSETMVRLLVDHIRIADGRVAYRDANRAGEPFTALLEPLG 181

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
             L  L+  +       +    + +  G+V  +G    +   S  +I        K +S+
Sbjct: 182 IELDGLS-TLPEDRGAYLLAARLPAQGGTVKWKGDLALNPLASRGEIGLEGVRLAKLLSV 240

Query: 220 ---KIQLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLLNLEL---SAKKSRL 272
                     +  +   L       +           V G    + +L L         L
Sbjct: 241 VKSPRNFDLPSGTLAASLRYRFAMVQNAAGDDAPWVRVDGANLVVRDLTLAPRDGGVPAL 300

Query: 273 --------SGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
                     NF ++   ++++R  L      ++ D   
Sbjct: 301 QLAEARVADANFDLATRAIQVARISLDGAKLAATRDARG 339


>gi|114331260|ref|YP_747482.1| hypothetical protein Neut_1265 [Nitrosomonas eutropha C91]
 gi|114308274|gb|ABI59517.1| conserved hypothetical protein [Nitrosomonas eutropha C91]
          Length = 1296

 Score = 70.3 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/301 (10%), Positives = 85/301 (28%), Gaps = 16/301 (5%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIE 84
             D  ++R D     T + G+ + +   I+ +     P +  + + +  ++         
Sbjct: 39  LPDIGNYRSDIAAAITRVAGQPVRID-VIQANWDGLRPHLSMQGVSVHDQQGHLVLI-FP 96

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------QRKSTMDMIHNVI 138
           G+     +  +L GE+   ++ ID+P L     ++G+ +         R+ +      + 
Sbjct: 97  GIEGTVSWRSMLRGELNFHEIVIDRPALVTRRDTEGLLHIAGITLGGDRQESGFFDWLLR 156

Query: 139 LEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197
             ++ VK   I   D      V++   +NL +  R         + +     +     + 
Sbjct: 157 QRRLVVKQAIIYWQDDLRLGTVHYFESVNLLLQNRQGGKRHQFGLRAQSSGPLFS-KVDI 215

Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257
                   +      + +            +   + L  +L     Q        V    
Sbjct: 216 RGDLIGDSVQMLSAWQGRLFVQLQDFDLENWQEWMTLPADLTLKRGQGSVRAWMDVGAGN 275

Query: 258 SK--LLNLELSAKKSRLSGNFKI---SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312
               + ++ L       + +  +        R    K +               V   + 
Sbjct: 276 LSRWVADINLRKAAIHFAQHLSLLEIDHLYGRSGWSKTEDAQDTDEQWFVRDLSVELKDL 335

Query: 313 N 313
            
Sbjct: 336 P 336


>gi|300721800|ref|YP_003711078.1| hypothetical protein XNC1_0785 [Xenorhabdus nematophila ATCC 19061]
 gi|297628295|emb|CBJ88856.1| conserved hypothetical protein; putative exported protein
           [Xenorhabdus nematophila ATCC 19061]
          Length = 1272

 Score = 70.3 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/348 (10%), Positives = 95/348 (27%), Gaps = 28/348 (8%)

Query: 2   LRRV---LIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56
           +RR+   L+    +  +V+    +   F      ++R+    +        + + G IK 
Sbjct: 1   MRRLPGILLATAAIVIIVVALLVSGLRFFLPHINEYRQQLAEKIAGATDMPVNI-GYIKG 59

Query: 57  HILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
           H   F PS+  +DI    +         + + +  +    LL       D+   Q  +N+
Sbjct: 60  HWESFGPSLEIRDISAKAEHGD---IHAKKIVLSLDIWRSLLQRRWYFRDLSFYQLQVNY 116

Query: 115 YLSSKGVS--NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQ 168
           + +  G +  +      ++  +         +   R   +    ++       L+ LN  
Sbjct: 117 HKALFGQNGDSVLSEPDSLSSLFLEQFNHFDLNDSRFTFLTPSGEKADLRLPQLTWLNED 176

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGN-FDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
              R    +S  SI+  +G V  +      +   +   +       +  + L   L    
Sbjct: 177 NRHRAQGSVSLSSINGQEGVVQVKLDLKDINGLLNDGALYLQADDIDMRLWLSRWLKDNT 236

Query: 228 YPIIIDLFGNLFWNEKQPIYS---GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                      + + +                   + + +     + L    +       
Sbjct: 237 GLENAHFSLASWISLQDGRIDRGYLQLKQGQADWHVGDEKHQLAVNNLLLQMRRQGEGWL 296

Query: 285 ISRYKLQSILPNSSTDEDNKTKV-------SQDEENLLNFSENGAESM 325
                L ++  ++        K            ++         +  
Sbjct: 297 FDIPNLSNLKTDNQQWPVGHIKALYLNESPQYQNKDHWRIRAENIQLE 344


>gi|294338954|emb|CAZ87298.1| conserved hypothetical protein; putative exported protein
           [Thiomonas sp. 3As]
          Length = 1316

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 49/357 (13%), Positives = 103/357 (28%), Gaps = 48/357 (13%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPS 63
           VLI  G     V  G   V    +         + A   +  +  V    K+   P   +
Sbjct: 21  VLIVAGLFVFYVAFGYLAVGPLAE-----HYIPKLAQSQLDSRATVG---KVAFDPLHLN 72

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
           +    +++   +     +    L +    + L         + IDQP +N  ++  G  N
Sbjct: 73  LTVDQLQLSTPQGA-PLAGFGKLFVDFAPVSLFRWAWTFRQIRIDQPQVNVAIAQGGAMN 131

Query: 124 W----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY--FLSDLNLQISA 171
           W           +     D +  V++E++ + GG ++  D      Y   L+ LN+QI+ 
Sbjct: 132 WGALVRALQRGPKPAKPSDTLPRVVIEQLQIAGGTLRYADANRPHPYATQLTPLNVQIND 191

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
                 +             + T  +        + +   A+   + L      +     
Sbjct: 192 LSTLPKARGQYAISLVLPEQKATLRWKGYVGVNPLVSGGQAELTELDLAAAARAVP---- 247

Query: 232 IDLFGNLFWNEKQPIYSGVFSV-------------AGDFSKLLNLELSAKKSRLSGNFKI 278
            +L   L            +S               G   + L     A   +   N K+
Sbjct: 248 -NLSSTLQITSGTASIHAAYSAVQGQQGWLWAINDLGAQIQTLAARAGAAAVQ-WQNLKL 305

Query: 279 SDGNVRISR--YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
               +  ++    +QS+  +  +    + ++             GA+         F
Sbjct: 306 DRAKIDGAKRTVSMQSLSLDGLSAASGRDQLQFHTA-----QLQGAQLDWGRQHAGF 357


>gi|77166114|ref|YP_344639.1| hypothetical protein Noc_2656 [Nitrosococcus oceani ATCC 19707]
 gi|254435890|ref|ZP_05049397.1| conserved hypothetical protein TIGR02099 [Nitrosococcus oceani
           AFC27]
 gi|76884428|gb|ABA59109.1| Conserved hypothetical protein 2099 [Nitrosococcus oceani ATCC
           19707]
 gi|207089001|gb|EDZ66273.1| conserved hypothetical protein TIGR02099 [Nitrosococcus oceani
           AFC27]
          Length = 1288

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/315 (12%), Positives = 80/315 (25%), Gaps = 29/315 (9%)

Query: 3   RRVLIGLGFLF--SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-L 59
           R   + LG L    V++ GA      +   +      R  +  +G+++ V   I +    
Sbjct: 9   RYFYLSLGILACCIVLIFGALWTLWTVVEDEP-ATISRWLSTALGREVQVS-EIALSWRG 66

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLSS 118
             P +    +RI   +          + + A        GE  +  + I    L      
Sbjct: 67  GEPRLHLTGVRIIDPQTERQLLSFREIYLDAAPSRTSAEGEWMLRHLTIIGGELTVERKP 126

Query: 119 KG--------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
            G                        + L ++ +    I+ +D   ++      L LQ+ 
Sbjct: 127 AGCIRVYGLQDLESPCPHPPRLPAWVLNLTQLTLVDMAIRWLDPVLERK----PLELQVR 182

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
              L           K ++  +       K          P     + LK +   LA   
Sbjct: 183 ELQLRNEEDFHWVEGKATLAEKFGSEIAVKAKFTGGGIRDPRSQGVLYLKGEGLRLASWQ 242

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
             D    L +   +                      A   ++   F   +  +  +    
Sbjct: 243 ASDFLAGLHFIHGRGDLELGLR-----------WGKAALHQVLAKFDWENLKITGNTQTA 291

Query: 291 QSILPNSSTDEDNKT 305
           ++    S        
Sbjct: 292 EAPGSISFQRLAGTA 306


>gi|110834450|ref|YP_693309.1| hypothetical protein ABO_1589 [Alcanivorax borkumensis SK2]
 gi|110647561|emb|CAL17037.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 977

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/336 (8%), Positives = 94/336 (27%), Gaps = 44/336 (13%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FP 62
           + L+ L   + +       +  F+     R++       + G+++ +    ++ I P   
Sbjct: 15  KALVILAGFYLL----YVLLGFFVAPGLVRDNARDALAELTGREVVIS---EVKINPLAL 67

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           S       I   E          L +  E   L         + ++  ++    +   V 
Sbjct: 68  SATVNGFAI-NDEQTQVLLGFNQLYVNFEVSSLFRWRWHFKQIGVEGLNVRAQRNPGSVF 126

Query: 123 NWF------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL-- 162
           N+                           + N+ ++++ +  G ++  +    + + L  
Sbjct: 127 NFDDIIAHMETQQADSDPKVEPVSDAESSLPNISVDELSLSHGELRYTEATGKEPHQLIL 186

Query: 163 ------SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216
                 ++ +        N  +        G+    G   F    +   ++         
Sbjct: 187 PVAFTVTNFSTVAKGEDQNGYAIHLEGPEGGAFDWNGHFAFSPFLAHGHLSIEKVDLVSL 246

Query: 217 ISL---KIQLFPLAYPIIIDLFGNLFWNEKQPIY--SGVFSVAGDFSK---LLNLELSAK 268
             L   +++    +  + +         +   +   +G  ++     +        +   
Sbjct: 247 AKLAEGEVRFTVPSGELDLQTDYLFSTEQGPRVMVNNGELTLRDLQIQKPGEQAPSVEVP 306

Query: 269 KSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDN 303
              ++G +   +   +++    L+    N+   ED 
Sbjct: 307 ALTVTGISVDSAKKEIQLPNVALEQPQVNAVLAEDG 342



 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 86/278 (30%), Gaps = 37/278 (13%)

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
           +  +D++I +  + +   ++  L++    +     EI++ ++ ++QP +N  L+  G+  
Sbjct: 286 LTLRDLQIQKPGEQAPSVEVPALTVTGISVDSAKKEIQLPNVALEQPQVNAVLAEDGLDL 345

Query: 124 WFQRKSTMDMI-------------------------HNVILEKIHVKGGRIKIIDQESD- 157
                                                   L+ + ++G  +++ D+  + 
Sbjct: 346 ATLFLPVDPQEAEQRKQDVKEKAQEAAERIAEAETVWVTRLDNLAIEGNTLRLTDRTLNP 405

Query: 158 -QVYFLSDLNLQISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFP 211
            Q   L+D  L +S   +   +  +          GS+   G G       + K      
Sbjct: 406 AQTMTLTDGGLTLSNLIIGEEATFTWQGKATLQEQGSLTHSGEGQLAPLSISAKGALTAL 465

Query: 212 AKNKAISL---KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN-LELSA 267
                      +  L   +  + +DL   +  +      +G   V     +      +  
Sbjct: 466 PLAPLSPWLEREAPLKMTSGQLSVDLQSTVKGDTPDITVNGSAGVINLNLQEGGRPLIKV 525

Query: 268 KKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDNK 304
            K ++   +   +   VR+    L  I      D   +
Sbjct: 526 NKGQVKNVSLATATQQVRVGEILLTGIDMLHRVDAQGR 563


>gi|254490478|ref|ZP_05103664.1| conserved hypothetical protein TIGR02099 [Methylophaga thiooxidans
           DMS010]
 gi|224464222|gb|EEF80485.1| conserved hypothetical protein TIGR02099 [Methylophaga thiooxydans
           DMS010]
          Length = 1264

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 48/372 (12%), Positives = 112/372 (30%), Gaps = 25/372 (6%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R++   +     + L+G        D     +++    A+   G  I ++          
Sbjct: 11  RQLFYLIVVGIVLSLLGVMGAVWLSDEVAKRKDEIAAWASDKTGYPITIESAGLYWFDLI 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKG 120
           P +  +   + QK   +     E + +  + L  +   E  V D  I+   L+    + G
Sbjct: 71  PKLEVRQAVLLQKTSNTAVVTAEQIYLSLDILASIEQREPVVADASINGVDLSVARDNAG 130

Query: 121 VSNWF---------QRKSTMDMIHNVI-LEKIHVKGGRIKIIDQESDQ---VYFLSDLNL 167
                            +  D +  +  L+++ +    I   DQ+       Y L   N+
Sbjct: 131 QLRLTGLESGERRVSATTLPDALRWLSWLKQLELADISIDYSDQQRPTIAGRYHLQQANV 190

Query: 168 QISARFLNIISPLSIDS-IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
             S  +    + L + + +  +V   GT    +  +         + + +++  +    L
Sbjct: 191 AFSDNYWQTQASLQLPAHLGNTVNFSGTAEIHSDYTLKAWQGKLLSDDVSLAPILAEQSL 250

Query: 227 AYPIIIDLFGNL-----FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI--S 279
              +I     +L          +       +V          +   + + L G  K    
Sbjct: 251 NGALITSGIASLVIQAEQKTTGELSADVNLAVNDLMLLSDKTDEKLEVNGLQGRLKWQTQ 310

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339
               ++    LQ  + + +       +V+Q  +N+L    N      D++      +   
Sbjct: 311 GQTWQLQSEGLQLQVADHAWPLT-SFEVTQSADNVLRAQSNYLRLS-DISSLALLMDNMP 368

Query: 340 KNKNDDLKKDDI 351
                     DI
Sbjct: 369 APLLTTQPAGDI 380


>gi|289810066|ref|ZP_06540695.1| putative assembly protein [Salmonella enterica subsp. enterica
          serovar Typhi str. AG3]
          Length = 61

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 28/61 (45%)

Query: 2  LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
          +RR L  L  L  V++ G   + L ++  DFR    +Q       ++ + G ++ H+ P 
Sbjct: 1  MRRFLTTLMILLVVLVAGFSALVLLVNPNDFRAYMVQQVAARSEYQLQLDGPLRWHVWPQ 60

Query: 62 P 62
           
Sbjct: 61 L 61


>gi|77457070|ref|YP_346575.1| hypothetical protein Pfl01_0843 [Pseudomonas fluorescens Pf0-1]
 gi|77381073|gb|ABA72586.1| putative conserved exporte protein [Pseudomonas fluorescens Pf0-1]
          Length = 1267

 Score = 69.9 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 102/301 (33%), Gaps = 29/301 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  +GL  L  V++    ++   +     ++R D E +A+  +G  + + G ++ +   F
Sbjct: 13  RWGLGLCALVLVLMALYVSLGRELTPLVAEYRTDIEDKASDALGMPLQI-GELEGNWSGF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P +   D+ +     G+   +++ +    +    LL+ E+R+  + ++   ++      
Sbjct: 72  APILLAHDVMVG---SGANALRLDRVRAVPDLWASLLAREVRIAHLELNGLKISLKEGED 128

Query: 120 GVSNWFQRKSTMDMIHNVI--------LEKIHVKGGRIKII-DQESDQVYFLSDLNLQIS 170
           G           D   +          ++++ V   ++ +   +++        LNL+  
Sbjct: 129 GKWALEGLPVQQDQPMDPEQLFNRMQMIQQLSVLDSQVTLQPREQAPLTLTYVGLNLKTG 188

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                + + L++      V           +           ++  +   + L    +  
Sbjct: 189 TSRQRLDARLTLP-DGQPVALSLRTRIRPSQ----------WQSSEVEGYVSLPQSDWSK 237

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
            +       WN  +    G   V      L +  +     +L+G +      ++I+   L
Sbjct: 238 WLPERVTQQWNFSEIKAGGELWVNWREGALQSAAIRLNAPQLTGAY-AERKPIQINNLAL 296

Query: 291 Q 291
            
Sbjct: 297 N 297


>gi|330811783|ref|YP_004356245.1| hypothetical protein PSEBR_a4822 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379891|gb|AEA71241.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 977

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 48/372 (12%), Positives = 107/372 (28%), Gaps = 35/372 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + LI         L     +   I          +Q   +      ++   +I + PF
Sbjct: 1   MPKGLIRAIGALLTALALYSLLGFLILPGIALRIANQQLATLATVPAQIQ---RIELNPF 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              V    + I +   G  +   E L    +   L SG + + D+ +D+P      +  G
Sbjct: 58  SLEVTLWGLNIGEP--GKEQVGFERLYANLQLDSLWSGALHLVDIELDKPKTEVMFAKDG 115

Query: 121 VSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166
             N                       + +++I + GG +   D    +         D  
Sbjct: 116 QLNLLGLFKLPASEPTPADPEAKPFPLRVDRIKLAGGYVHFQDLRPSEPIEFLYDTLDFE 175

Query: 167 LQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS----- 218
           L+  +   +  + +++ +     G +   G  +     S   +                 
Sbjct: 176 LKNLSTLPDDNADMTLVAAGPEGGQIDWTGNFSLTPIASQGTLKVTGGQMKAWWPYVRDA 235

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN--- 275
           + + L      +  D   NL    +  + +   SVA    K  +     K  RL  +   
Sbjct: 236 VPLVLENGVLNLSTDYKLNLAKGTELLLNNVAVSVAPFAIKAPDGRPLVKLERLDVSETT 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335
             ++   V + + + Q +   ++ + D +     D + L        +   +        
Sbjct: 296 VDLAKQQVIVGKIRSQKLETWAAREADGQ----LDWQKLFASQPAKPQVKAEPTSAPAAA 351

Query: 336 EEEKKNKNDDLK 347
           +  K       K
Sbjct: 352 DSPKAEPAPPSK 363


>gi|77919952|ref|YP_357767.1| hypothetical protein Pcar_2358 [Pelobacter carbinolicus DSM 2380]
 gi|77546035|gb|ABA89597.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
          Length = 1102

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 101/309 (32%), Gaps = 19/309 (6%)

Query: 23  VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82
             +  D   +RE    + ++ + + +++ G   +     P+   +DIRI +    S    
Sbjct: 35  FLMTFDLNAYRESLANRLSIALDQPVSI-GSAHMSWRQGPAFNIRDIRIGEPLTESG-GD 92

Query: 83  IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM--IHNVILE 140
           I  L +    LPLL G++   DM I++P  +  L S          +      +  + + 
Sbjct: 93  IAHLFLHPRLLPLLMGKVVFDDMIIERPIYHARLLSSSSDTGTDLPTIPLRALLQTIQVH 152

Query: 141 KIHVKGGRIKIIDQESDQ----VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196
            + +  G++++ + + D+       ++ +NL +          L+I +         T +
Sbjct: 153 NLTIIDGQLRLENAQDDRHPLAPLQINAINLNVRNLLTGRPGKLNIHAELPQKEGLATLD 212

Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGD 256
               ++ F        +     L++Q+  +A      L   L   E  P  SG       
Sbjct: 213 VKG-KTTFDTNLGN-WRQIKGQLRLQMENIATE---QLRSWLSLPEATPALSG-----RA 262

Query: 257 FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN 316
             +L     +A     S +    +  +     +                  +Q+   + +
Sbjct: 263 SLELNADGSAASGLHFSASLSGKNLQLAWPG-RYAKPPAVKKVTVSGTWVAAQNINRVTD 321

Query: 317 FSENGAESM 325
                    
Sbjct: 322 LDLYLDTLN 330


>gi|170727102|ref|YP_001761128.1| hypothetical protein Swoo_2757 [Shewanella woodyi ATCC 51908]
 gi|169812449|gb|ACA87033.1| protein of unknown function DUF748 [Shewanella woodyi ATCC 51908]
          Length = 1024

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 49/378 (12%), Positives = 120/378 (31%), Gaps = 39/378 (10%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDG 77
              T+   +  +   +    Q +  + + +++K    + I PF   V   ++ I + ED 
Sbjct: 34  SFVTLLGLLIPSIAEQQLPIQLSETLKRPVSLK---DVSINPFNLHVSLTELHIFE-EDN 89

Query: 78  SFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSK----------------G 120
           +  +    L+    F   L +G I + D+ +  P+L     S+                 
Sbjct: 90  TKFTGFAALNFELSFWHSLINGAISIKDVTLTGPYLLAERLSQTEGAEFNFSDIITEMTN 149

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
            +     +     + ++++E++ +  G +  ID  +D      D+NL I           
Sbjct: 150 TTTSAPSEENPATLPHIMVERLAIVSGNLNFIDTLTDSQLSYPDINLDIKGFDTLTEISN 209

Query: 181 SIDSIKGSVIAEGTGNFDNK-RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
             ++          G    +  +  ++  +      ++ LK    P  +   I       
Sbjct: 210 QQNA-ANRFSIRLQGKNGGEIATQGQLQLSPLNITGSLQLKEIALPEFWSF-ISEEFQAH 267

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG--------NVRISRYKLQ 291
            +  +  +S  F+++       ++E     +   G F + D          + +  +  +
Sbjct: 268 LDTGKFNFSTDFALS---MSETSVEQPLILTTSQGQFALKDILFTHENRPLISLPLFAAE 324

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
           +I  N S     + ++S+     L    + + +  DL           K K     +   
Sbjct: 325 NIALNLSQQ---QLQISRLYSEKLTLDGHVSAAGLDLVPLFMPNFISTKTKEPGDTQAAE 381

Query: 352 QYSVNKKEEKDNSHDKEN 369
             +         +   E 
Sbjct: 382 VNTETSTPLPKLAVIDEP 399


>gi|188582287|ref|YP_001925732.1| AsmA family protein [Methylobacterium populi BJ001]
 gi|179345785|gb|ACB81197.1| AsmA family protein [Methylobacterium populi BJ001]
          Length = 634

 Score = 69.5 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 44/336 (13%), Positives = 97/336 (28%), Gaps = 30/336 (8%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF-ESK 82
           P  ++         R      G  +A +G  +I +LP P V F+DIR+ + +      + 
Sbjct: 25  PWSVEAPSAARFVSRGLQQSWGVALAARGRTEIVLLPLPRVVFEDIRLTEGDAAGPVLAS 84

Query: 83  IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH---NVIL 139
              LS++     L +G + V  + +D   +     +         +     I        
Sbjct: 85  GGNLSLQLGLAALFTGRVEVDSLTLDGGEVVLPQEASDTRWSATVERLTRSIAGEVGDRP 144

Query: 140 EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN 199
            +I +    +K  D     +    D++L IS    +            S+   G  +++ 
Sbjct: 145 RRIILARCAVKGRDPRDGTLQTARDVDLTISWPAWSE-----------SLAVSGGFHWNG 193

Query: 200 KRSAFKITANFP---AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG- 255
             +   +    P              L      +  +  G+L  +  +   +G       
Sbjct: 194 GSARITLAGLRPHALLSGGESPFTAALTWPTGSLNAEGSGSL-HDGLKASGTGSLQTRSL 252

Query: 256 -----DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD 310
                     L L    +   + G+F+ +   ++     ++S         +     S  
Sbjct: 253 HRTLALSGGGLALSPFVEDFSVEGSFEAAASQIQFPSVTVRS----DGNVLEGAGSASFG 308

Query: 311 -EENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
              N +  +              F       + +D 
Sbjct: 309 SPRNAVQATLAAESLNLSPLLAGFLRLTGFDSADDP 344


>gi|239818117|ref|YP_002947027.1| hypothetical protein Vapar_5159 [Variovorax paradoxus S110]
 gi|239804694|gb|ACS21761.1| conserved hypothetical protein [Variovorax paradoxus S110]
          Length = 1394

 Score = 69.5 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/289 (11%), Positives = 77/289 (26%), Gaps = 26/289 (8%)

Query: 31  DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
           D+R   E QA+  +G  + +          FP+   +D+ +   +      ++  +    
Sbjct: 50  DYRGALEAQASKAIGVPVRIGSITARSDSLFPAFELRDVVLHDAQ-KREALRLVRVVASV 108

Query: 91  EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV-------SNWFQRKSTMDMIHNVILEKIH 143
               L    +    +YI+ P L+      G         +      T          ++ 
Sbjct: 109 SPRSLWR--LNFEQLYIEGPQLDVRRDVLGKLHVAGLHMDTDTTGETRAADWFFAQRELV 166

Query: 144 VKGGRIKIIDQE-SDQVYFLSDLNLQISARFLNIISPLSIDSIKGS-VIAEGTGNFDNKR 201
           V+GG ++  D++   +   L+D+              L      G        G F    
Sbjct: 167 VEGGTVRWTDEQRQAEPLLLTDVRFVARNTARRHGLRLDATPPVGWGERFTLRGQFRQPL 226

Query: 202 SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF-------GNLFWNEKQPIYSG----- 249
            + +         +  +    +        + L        G L                
Sbjct: 227 LSVRSGRWQTWDGQVYADLPYMDVTRLGRYVSLDARIREGSGALRLWADVKRGQIVGGAA 286

Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNF--KISDGNVRISRYKLQSILPN 296
              +    + L           ++G    ++ +  +  S   LQ    +
Sbjct: 287 DLGLDRIDASLGRGLQPLVLRAVTGRLAGQLDEEKLEFSTAALQFDTAD 335


>gi|114562771|ref|YP_750284.1| hypothetical protein Sfri_1595 [Shewanella frigidimarina NCIMB 400]
 gi|114334064|gb|ABI71446.1| protein of unknown function DUF748 [Shewanella frigidimarina NCIMB
           400]
          Length = 1128

 Score = 69.5 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 45/348 (12%), Positives = 107/348 (30%), Gaps = 33/348 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-P 62
           R+L    + F+V L+G   +   I +   ++      T  +G+ + ++    I I PF  
Sbjct: 17  RILKLALYGFTVYLLGCAVLGGLIPY-IAKQQAPTILTEQLGRNVTLQ---DISINPFTL 72

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            +      I++ +     +         +    + S  + + D+ + QP      S    
Sbjct: 73  ELTVSGFAINELDSPKTFASFATAYGNIQLWQSITSWAVVIEDIRLQQPTFRVARSETAN 132

Query: 122 SNW-----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
            ++                     +   +I  + +  I ++ G   + D  +D      +
Sbjct: 133 QHFVFNFSDIITRLSQNTQPAPTSTEPTIIPAINIANIQIQQGVFTLDDNVTDTHINYPN 192

Query: 165 LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLKIQL 223
           +N+ ++       +                  F        +      A    + L   +
Sbjct: 193 INVSLAQFNSLSSALNDKQDQVNRYNLRIEDQFKGSVALQGQFQLAPLAIKGDVKLT-GI 251

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL-ELSAKKSRLSGN----FKI 278
               Y   +D    +   E     +G ++V      L  +  ++  K+++  N       
Sbjct: 252 DLSRYWSFVDQLFAINLAEGTLSLNGQYAVTLQDKNLAPISHINVTKAQIVINHFKALHQ 311

Query: 279 SDGNVRISRYKLQSILPNS--STDEDNKTKVSQDEENLLNFSENGAES 324
            D  + I    L +I  +S        + +  +     LN +  GA+ 
Sbjct: 312 QDEKIAIDVLALNNIDLDSHKKRVSIGEFQTEKGNI-KLNITPTGADL 358


>gi|152984100|ref|YP_001350776.1| hypothetical protein PSPA7_5452 [Pseudomonas aeruginosa PA7]
 gi|150959258|gb|ABR81283.1| hypothetical protein PSPA7_5452 [Pseudomonas aeruginosa PA7]
          Length = 1088

 Score = 69.5 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 53/408 (12%), Positives = 113/408 (27%), Gaps = 39/408 (9%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M + +   +  L    LV      L I     R    +Q          ++   +I   P
Sbjct: 1   MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLR-VANQQLAQYATVPARLE---RIEFNP 56

Query: 61  F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           F   +    +R+  +++   +     L    +   L   ++ + D+ ++ PH       K
Sbjct: 57  FSLELTLWGLRLGDEKN--PQVAFRRLYANLQLDSLWKRQLHLADVELEGPHTELLFDEK 114

Query: 120 GVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
           G  N                       + +++I +  G +   D    +     D     
Sbjct: 115 GQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPV---DFRFDP 171

Query: 170 SARFLNIISPLSIDSIKGSVIA----EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
               L+ +S L  D  K +++A     G  +++   +   IT+      K I LK     
Sbjct: 172 LGFELHNLSTLPDDGAKMTLVATGPDGGRLDWEGDLTLVPITSRGHLSIKDIQLKAWWPY 231

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN---------- 275
           +     + L   +                    K          +   G           
Sbjct: 232 VRDNAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSINSPQGKPLAKLASLDV 291

Query: 276 ----FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331
                 ++   V +   + Q +   ++ ++D +    +            A +      T
Sbjct: 292 AATTLDLAKQEVVLGEVRSQGLEAWAAREKDGQLDWQKLFA-DFTPPPRKAPAPKPKENT 350

Query: 332 DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
           D   E  +  K       D           + S DK  +++ S  +  
Sbjct: 351 DAAAEPAETAKAASEPATDRAAKATAIASGETSKDKPAEKDASVAETE 398


>gi|75909088|ref|YP_323384.1| hypothetical protein Ava_2878 [Anabaena variabilis ATCC 29413]
 gi|75702813|gb|ABA22489.1| Protein of unknown function DUF490 [Anabaena variabilis ATCC 29413]
          Length = 1829

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/333 (11%), Positives = 88/333 (26%), Gaps = 14/333 (4%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR  + LG +    +           + D     E     ++G+ I +    ++      
Sbjct: 16  RRASLVLGIMALAGVATGAWWARNYVYNDLAPLVETNLEQLLGRSIKIG---QVEGFTLS 72

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           S+ F  + I            + + ++     +L     V D+ + +P++       G  
Sbjct: 73  SLRFSSLSIPATPTDPDTVTAQAVDVQFSPWQILVTRTLVLDVTLVKPNVYIQQEQDGRW 132

Query: 123 NWFQRKSTMDMIH-NVILEKIHVKGGRIKIIDQESDQV-------YFLSDLNLQISARFL 174
              + K+          L+ +++  G I+++   S            +  +         
Sbjct: 133 VTAEVKTGEGSGAIQTQLQTLNIVDGNIELLSASSPTKPQGSVVLTQVGGVARFSPDNER 192

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                    +  G+V   G      + +  ++ A     +    L +QL  +     ID 
Sbjct: 193 IGYQINGQLTRGGTVKISGETQPKTQLTNLQVVAQSLLASDISRL-VQLPIVLQSGRIDA 251

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                    Q   S   +   +        L    S  +G        + +   +     
Sbjct: 252 DLAAQIPANQSEISITGTATTNQVTAKVQNLPQSFSNANGRLIFQGQTIALENLRTNFGQ 311

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
                  +                   A+ + D
Sbjct: 312 V--PLLANGTVNTQTGFNLAAQVKSVSAKQLLD 342


>gi|254427727|ref|ZP_05041434.1| conserved domain protein [Alcanivorax sp. DG881]
 gi|196193896|gb|EDX88855.1| conserved domain protein [Alcanivorax sp. DG881]
          Length = 978

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/390 (9%), Positives = 97/390 (24%), Gaps = 55/390 (14%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +  F+     R++       + G+++ +    ++ I P   S       I   E   
Sbjct: 27  YALLGFFVAPGLVRDNARDALAELTGREVVIS---EVKINPLALSATVNGFAI-NDEQTD 82

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF------------- 125
                  L +  E   L         + +D   +    +   V N+              
Sbjct: 83  VLLGFNQLYVNFELSSLFRWSWHFSQVDLDGLTVRGQRNPGSVFNFDDVLAHIDSQLTDS 142

Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--------SDLNLQIS 170
                          + N+ +  + +  G ++  +    + + L        ++ +    
Sbjct: 143 AEDVEPEPAPEDAGALPNISVGALALTNGDLRYTEAAGKEPHQLVLPVAFTVTNFSTVAK 202

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF-----PAKNKAISLKIQLFP 225
               N  +        G+   +G   F    +  +++         AK     ++  +  
Sbjct: 203 GENQNGYAIRLEGPDGGAFDWDGRFEFSPFLAQGRLSIEKVDLVSLAKLAQGEVRFTVPS 262

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK---LLNLELSAKKSRLSG-NFKISDG 281
               +  D         +  + +G  ++     +        +S     ++G        
Sbjct: 263 GELDLQTDYLFTTEPGTRVVVSNGELTLRELQIQKPGEDAPSVSVPALTVTGIAVDSEKQ 322

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341
            + +    L     N+    D                        D  E +  ++E K+ 
Sbjct: 323 EITLPEVSLSQPAVNAVLAADG-------------LDLATLFLPVDPEEAEQRKQEVKEK 369

Query: 342 KNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371
             +  ++     +V          D     
Sbjct: 370 AQEAAERIKEAETVWVTNLGTLKVDGNTFR 399


>gi|188994009|ref|YP_001928261.1| hypothetical protein PGN_0145 [Porphyromonas gingivalis ATCC 33277]
 gi|188593689|dbj|BAG32664.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 1515

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/341 (12%), Positives = 89/341 (26%), Gaps = 23/341 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFR----EDFERQATLIVGKKIAVKGGIKIH 57
           +RR    +  + +V         L +     +       + + +  +G  + + G I I 
Sbjct: 31  MRRSKWIVVAVLTVAFCLLILPNLILQIPSVKRSVAGRVQTELSKALGTHVRI-GHISIG 89

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL- 116
                 +   DI I  +         E L+   + LPLL G +      + +  L+ Y  
Sbjct: 90  WWRQ--MEIDDIVIFDRA-RRPAVSAERLTGGLDLLPLLKGRLSFSSARLFKGELDVYRS 146

Query: 117 SSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
                 N          +         + +  I ++  R+        Q   L  L+L  
Sbjct: 147 RPDTALNIQFLLDALKSKNPEEPSRLRLNINTILLRNCRLSASGLYKAQSDTLGLLDLNA 206

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
             R     S      ++     E     D K     ++           L I L      
Sbjct: 207 KVRLFQADSTGLKAQLRHLSFLEKNTGLDLKELHADVSLRGD-TLGVARLHISLPNSHIG 265

Query: 230 IIID---LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS---GNFKISDGNV 283
           ++     L           +      +     K L   L      L+       ++ G  
Sbjct: 266 MVSGYCILSPESSALPAIRVTDLGGRIRPSDLKGLLPALDTMDDILNLSVPELTVASGEA 325

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
            +    +      +        ++ + E   +    +  + 
Sbjct: 326 VLPEISMNYGDELTLQAGIGLAEIGKKERMHVRLRLDELKL 366


>gi|332828897|gb|EGK01580.1| hypothetical protein HMPREF9455_02112 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 891

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/396 (12%), Positives = 125/396 (31%), Gaps = 38/396 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI--- 58
           +++VL  +G +  V+++   ++PL       +      A   +  K+ +K    +++   
Sbjct: 1   MKKVLTIIGIVLVVIIIAMISIPLLF-KDKIKTAVLNVANEQLNAKVDIK-DFGLNLFSN 58

Query: 59  LPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
            P  ++  +D  I    D       + +  S+  + + L      +  + +D+  +   +
Sbjct: 59  FPNATLSLEDASITGIGDFEKDTLIQAKSGSVTIDLMSLFGNNYNISRINLDRASVYAKV 118

Query: 117 SSKGVSNWFQRKSTM---------DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
            + G +N+   K+               N+ L+KI V    I   +  +     L+  + 
Sbjct: 119 LADGRTNYDIMKTDSTATGTEAENSTPFNLNLKKITVNDCNIVYQNDSTKMKLVLNKWSG 178

Query: 168 QISARFLNIISPLSIDS--IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
           +IS  F    + +   S   + S   +G    +  +     T N    N   +       
Sbjct: 179 EISGDFSASETTIKTTSEISEISFYMDGIPYLNKVKGNADATINANFDNMKFTFD----- 233

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--RLSGNFKISDGNV 283
                       +  NE +    G F++ G   + ++ +L       +      +    +
Sbjct: 234 ---------KSEIRINELKASIDGWFTMQGKNYEDMDFDLKLNAPDTQFKDILSLVPA-M 283

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343
             + +K       ++ D   K     +     +       +M           E     +
Sbjct: 284 YTADFKDVKTSGTATLDAYIKGLWQGENYPAFDVKIGVNNAMFQYPSLPKSVNEINVAVD 343

Query: 344 DDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
            + K   +   +    +   +        FSG+  I
Sbjct: 344 INSKGGSLDNMIIDISKFSFNLGGNP---FSGNLNI 376


>gi|89899180|ref|YP_521651.1| hypothetical protein Rfer_0366 [Rhodoferax ferrireducens T118]
 gi|89343917|gb|ABD68120.1| conserved hypothetical protein [Rhodoferax ferrireducens T118]
          Length = 1381

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/387 (11%), Positives = 97/387 (25%), Gaps = 45/387 (11%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFT-------VPLFIDW--TDFREDFERQATLIVGKKIAVK 51
           +L+   I   +   +VL   F        +   I     +FR   E  A   +G  + + 
Sbjct: 11  LLKTWTIVARWSLGLVLAAWFVFGLTWGALHWLIVPRIGEFRPQLEAYAARALGVPVRIG 70

Query: 52  GGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111
                     PS    D+ +   E G    ++  +        +    +    +Y+++P 
Sbjct: 71  AITAQSSGMIPSFELTDVELFD-EQGREALRLPRVLAALSPRSVWR--LGFEQLYVERPQ 127

Query: 112 LNFYLSSKGVSNWFQRKSTMDM-------IHNVILEKIHVKGGRIKIIDQ-ESDQVYFLS 163
           L+   +  G         +                 +  ++ G I   D+  +     L 
Sbjct: 128 LSIRRALDGKIRVAGLDFSQTSDTGSSAVDWFFSQLEFVIRDGSILWTDELRAAPTLALQ 187

Query: 164 DLNLQISARFLNIISPLSIDSIKGSV---IAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            ++L +          L  D+    +        G       +         + +  +  
Sbjct: 188 QVDLVVRNAGRRHN--LRFDATPPPLWGERFSVRGLMTQPLLSRHRGHWRDWQGQLYAAF 245

Query: 221 IQLFPLAYPIIIDL-------FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK---- 269
            ++         D+        G L               A      +N+ L A+     
Sbjct: 246 ARVDLSELQRYADVGVDLRQGKGALRAWVDVSRGQVTGGTADVALSEVNVTLGAQLQALE 305

Query: 270 -----SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
                 RLSG    +   +            +          V          +  G E 
Sbjct: 306 LLSVSGRLSGRLPANGFQLSTQALAFD--TRDGLRWPGGNVSVDYTAAEG-RVAARG-EL 361

Query: 325 MHDLNETDFFEEEEKKNKNDDLKKDDI 351
             D  +     +   +   D + +  +
Sbjct: 362 KADKLDLQALSQIADRLPIDPVTRAAL 388


>gi|126658784|ref|ZP_01729928.1| hypothetical protein CY0110_08031 [Cyanothece sp. CCY0110]
 gi|126619882|gb|EAZ90607.1| hypothetical protein CY0110_08031 [Cyanothece sp. CCY0110]
          Length = 792

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/298 (11%), Positives = 79/298 (26%), Gaps = 17/298 (5%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93
              E Q    + + + +             + F    +           + GL +    L
Sbjct: 58  PVVEEQLRTFLNRPVELGELEGFSFN---YIRFGQTELLTTPTDPANVSMSGLKIAYNPL 114

Query: 94  PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI-- 151
             +       ++   +P         G     Q  +       + L+ + ++ G   I  
Sbjct: 115 KYIIDRKLEIEVIAIEPSAYIEQGKDGNWLLTQFNTLNPNSP-IRLKNLGIQKGEAIIVS 173

Query: 152 --IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209
              D E +    + +L+  I     N      + S   +   +G  N     +    + N
Sbjct: 174 RSKDGEKETPINIENLSGIIQPINNNSEIKFQVKSNFVNSDNKGNFNIAGIFNQENRSTN 233

Query: 210 FPAKNKAISLKIQLFPLAYPIIID---LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS 266
              +   ++ +I    L  PI ++   +  NL  +      +    +A       N+E  
Sbjct: 234 LLIRGHQLNAEIISQVLPLPIELEAGKIDANLEVSLANKKLTNFQGIAKLTHVDTNVEGL 293

Query: 267 AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
            ++ +  G  +     +       Q               + +      N S      
Sbjct: 294 PQRLKTHGQLQFKGKKINFDEVITQFGEIRG--VVKGYLDLDKG----FNLSAKTQVI 345


>gi|296444564|ref|ZP_06886528.1| AsmA family protein [Methylosinus trichosporium OB3b]
 gi|296257832|gb|EFH04895.1| AsmA family protein [Methylosinus trichosporium OB3b]
          Length = 634

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 87/291 (29%), Gaps = 32/291 (10%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI 83
           P         E+   Q     G + A KG     +LP P +   D+        +   + 
Sbjct: 50  PWTFSTGAMLEEIAGQIEASSGLRAAAKGRSTFSLLPRPHIAIDDVAFADPS-FALTIEA 108

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK---------GVSNWFQRKSTMDMI 134
           E L      LPLL+G + + +  + +P +   L  K           +         +  
Sbjct: 109 ERLRGNVRLLPLLTGRLELANAELLRPRIRIALDRKPMTASGAAARAAAARPSTPEAETA 168

Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
               L  + +  G + ++ ++  +             R   I + L   S+      +  
Sbjct: 169 DRAPLGSVAILSGAVAVVFEDGREE------------RIDMIDATLDWSSVGAPATLDAA 216

Query: 195 GNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253
            ++  +R    +    P          + +   +  + ++  G +  +  +P ++G  S 
Sbjct: 217 FSWRGERPRAMLWFQKPGALLRGEASPMMMRIDSVSLRMEADG-VAQSGPKPRFTGRLSA 275

Query: 254 AGDFSKLLNLELSAKKS--------RLSGNFKISDGNVRISRYKLQSILPN 296
           +    +                   +++    +   + ++S     +   +
Sbjct: 276 SSPSLRDALRLADVSAPLPGRFENVQIAAKASVGLRDFQLSDLHFSADEND 326


>gi|167837763|ref|ZP_02464646.1| hypothetical protein Bpse38_14837 [Burkholderia thailandensis
           MSMB43]
          Length = 853

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 35/305 (11%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V   D+ I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISDLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARLAPTLSSLVVDDPDLLTERHADGALFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSI---- 185
                 +  E I ++GG ++  D + D     L  + + +    +     L   +     
Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAPELALKGIRIAVLNDGIVHRIALQAPANGTLF 224

Query: 186 KGSVIAEGTG---NFDNKRSAFKITANFPAKNKAISLK-----IQLFPLAYPIIIDLFGN 237
            G +                    T +       + L        +   AY   ID    
Sbjct: 225 HGPLDFRARFVHKALAPIGKPSNWTGDAYLSTGPVDLPTLAHYANIRLTAYAGRIDNAIW 284

Query: 238 LFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKSRLSGNFKISDGN---VRISRYKL 290
             + +     +G   + G    L        L    +R   +  I       + +SR   
Sbjct: 285 AHFGDGHLYRAGG-ELRGYDVALRVRPTQPRLDIPVARFGWDLAIDPKRDYTLHLSRLHA 343

Query: 291 QSILP 295
           +   P
Sbjct: 344 ELGQP 348


>gi|317494222|ref|ZP_07952638.1| hypothetical protein HMPREF0864_03407 [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917995|gb|EFV39338.1| hypothetical protein HMPREF0864_03407 [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 1267

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/336 (12%), Positives = 102/336 (30%), Gaps = 44/336 (13%)

Query: 2   LRRV-------LIGLGFLFSVVLVGA-FTVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+       L+ L  L ++++ G    +P       FR     +     G  + + G 
Sbjct: 1   MRRLSGYLLATLVTLTVLVALIVSGLRLALPHL---ERFRPQIVEKIEQYSGVPMKI-GS 56

Query: 54  IKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +      F P++  +DI + Q +      +I+ +++  +    LL    +  D+     +
Sbjct: 57  LDASWQSFGPTLDVRDISLAQPKGN---IRIQRVTVALDVWQSLLHWRWQFRDLTFYHLN 113

Query: 112 LN----FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLN 166
            N    F  SS G   +     T+  I     +   ++  ++        +    + +L 
Sbjct: 114 ANSNEPFSRSSSGSDGF--ESDTLTNIFLYQFDHFILRDSKVTFPSPSGTRIQLNIPNLT 171

Query: 167 LQISARFLNIISPLSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
              +A        +   + +G     +   +  +K                  + +Q   
Sbjct: 172 WLNTATRHRAEGQVMFSTQEGQHGNLQVRMDLHDKNGLLS----------DGQVYLQADE 221

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
           +     +  + N         +S    +     ++    L  K+   + +      ++ +
Sbjct: 222 IEMKPWLSRWVNRNTGLHSAKFSLASWLTVTDGEIQGGHLVLKQGEANWSTADKQHDLTV 281

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321
               LQ          D            LN + +G
Sbjct: 282 DNLNLQVGRVAGGWTFD---------IPQLNLATDG 308


>gi|28871617|ref|NP_794236.1| hypothetical protein PSPTO_4482 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28854869|gb|AAO57931.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 1002

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/386 (9%), Positives = 102/386 (26%), Gaps = 45/386 (11%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + L         V+V    +  FI          +Q          ++   ++   P+
Sbjct: 16  MSKGLKRTLGSLLAVIVLYSLLGFFILPGVALRIANQQLANYSTVPAKLE---RLEFNPY 72

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 73  TLELTLWGLNIGTP--GKEQVAFEKLYANLQIDSLWTKALHLQRVELIKPKAELLFDKQG 130

Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168
             N             +         + + +I +  G +   D    +        LN +
Sbjct: 131 KLNLAQLFKLPASEPAKDQPPSKPFPLRIGEIKLADGYVHFQDVRPSEPIEFLYDALNFE 190

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           +            +  +      G +   G  +     S   +           P    A
Sbjct: 191 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLVPITSEGTLKVTDGKMKLWWPYVRDA 250

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L  +     K    S   +     +      +  ++  +S  +
Sbjct: 251 LPLALENGVLNFSTAYKLDLSKETELKLTNLSASVAPFALNTPDGRPLVRLQRLDVSETS 310

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335
             ++   V + + + Q++   ++ + D +               +  +   +        
Sbjct: 311 VDLARQLVSVGKIRSQTLETWAAREVDGQ--------------LDWQKLFANPPGKPAAP 356

Query: 336 EEEKKNKNDDLKKDDIQYSVNKKEEK 361
           ++   ++         Q S     + 
Sbjct: 357 KKPAVDEKAAEPAPAPQTSAQASTQP 382


>gi|330958042|gb|EGH58302.1| hypothetical protein PMA4326_05621 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 985

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/331 (10%), Positives = 91/331 (27%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R L         VLV    +  FI          +Q          ++   ++   P+
Sbjct: 1   MSRGLKYTLGSVLAVLVLYSLLGFFILPGVALRIANQQLANYSTVPAKLE---RLEFNPY 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 58  TLELTLWGLNIGTP--GKEQIAFEKLYANLQIDSLWTRAVHLQRVELIKPKTELLFDKQG 115

Query: 121 VSNWFQ----------RKSTMDMIHNVILEKIHVKGGRIKIID--QESDQVYFLSDLNLQ 168
             N  Q                    + + +I +  G +   D    +   +    LN +
Sbjct: 116 KLNLAQLFKLPANEPTADEPPSKPFPLRIGEIKLADGYVHFQDMRPSAPIEFLYDALNFE 175

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           +            +  +      G +   G  +     S   +           P    A
Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLVPIASEGTLKVTDGKMKLWWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L        +    S   +     +      +  ++  +S  +
Sbjct: 236 LPLALEDGVLNFSTAYKLNLAKETELQLTNLSASVAPFALNTPDGRPLVRLQRLEVSETS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + Q +   ++ + D +  
Sbjct: 296 VDLAKQRVTVGKIRSQKLETWAARESDGQLD 326


>gi|194366671|ref|YP_002029281.1| hypothetical protein Smal_2899 [Stenotrophomonas maltophilia
           R551-3]
 gi|194349475|gb|ACF52598.1| conserved hypothetical protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 1283

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/279 (8%), Positives = 72/279 (25%), Gaps = 10/279 (3%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70
            L  + L+      L        E      +   G+ +             P +  K +R
Sbjct: 23  GLVGLALLVGTLSQLLPLAERHPEKIAAWLSERAGQPVRFDQLQTAWTRRGPLLQLKGLR 82

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
           I   +       I    +       L     + ++ +    L+      G  +      +
Sbjct: 83  IGAGQG----LAIGEAEVLVSLYSGLLPGRSLTELRLRGLALDLQQGEDGRWSVRGLPRS 138

Query: 131 MDMIHNVI----LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186
                 +     L ++ V GGR+ +          L  ++L++      +   +   +  
Sbjct: 139 DSGGDPLDALRRLGELQVIGGRLGVHAPGLGIDTTLPRIDLRLRVNGERLRVGVRAWAQT 198

Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
            ++      + D      +        +      +         + +  G L        
Sbjct: 199 DALPLTAVLDVDRAGGNGQAWLGADPVDFHAWSPLLAAGGVR--LREGKGELNLWLTLRD 256

Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
           ++ V        + + ++ +      +   ++     R+
Sbjct: 257 FAPVALTTDSDLRDVRIDGAPMPELAAPQLQLQRLQARL 295


>gi|26991388|ref|NP_746813.1| hypothetical protein PP_4704 [Pseudomonas putida KT2440]
 gi|24986456|gb|AAN70277.1|AE016668_3 conserved hypothetical protein [Pseudomonas putida KT2440]
          Length = 978

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/331 (9%), Positives = 92/331 (27%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + L         ++     +   I          +Q          ++   +I + PF
Sbjct: 1   MYKGLTRAAGAIVALVALYSLLGFLILPGVALRIANQQLAQYATVPAHLE---RIELNPF 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    ++I +   G  +   E L   A    L +  + +  + +D+P      +  G
Sbjct: 58  SLELTLWGLQIGEP--GKEQVGFERLYANASLDSLWTKALHLEAVELDKPRNEVLFAKDG 115

Query: 121 VSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168
             N            + +        + +  I +  G +   D    +       ++NL+
Sbjct: 116 TLNLTGLFKLPASEAKPEEPPSDPFPLRIGSIKLIDGYLHFEDLRPSEPIEFLYDNMNLE 175

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           +            +  +      G +  +GT +     S   +           P    A
Sbjct: 176 LKNLSTLPNDNADMTLVASGPNGGRIDWKGTLSLSPIASEGTLKVTDGKMKLFWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   ++      L             S   +     +             +S  +
Sbjct: 236 VPLVLEDGVVSLDTHYKLNLAKQTELLLDNVSVRIAPFAIKAPDGRPLARLASLEVSETS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             +    V + + + + +   ++ ++D +  
Sbjct: 296 IDLVKQQVTVGKVRSEKLETWAALEKDGQLD 326


>gi|218781036|ref|YP_002432354.1| hypothetical protein Dalk_3196 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762420|gb|ACL04886.1| protein of unknown function DUF490 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 1309

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/408 (12%), Positives = 120/408 (29%), Gaps = 42/408 (10%)

Query: 2   LRRVLIGLG-FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVG-KKIAVKGGIKIHIL 59
           ++R+   L   L   ++ G   VPL +     +E   + A        +++       I+
Sbjct: 1   MKRIFKILLWALLVFLIFGFIVVPLALRTDFVQERLTQYAENATKDLPVSISFS---RIM 57

Query: 60  PFP--SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
           P     V  + ++I  +       + E +++      +L  EI +  + +D P ++   +
Sbjct: 58  PDVLSRVTVEGLKISAQN--EVIFRTESVTVGPLLPGVLGEEISLGHVIVDNPTVSLVRN 115

Query: 118 SKGVSN---WFQRKSTMDM----------IHNVILEKIHVKGGRIKIIDQESDQVYFLSD 164
             G  N   WF      D              V + K  +K GRI++     D    +  
Sbjct: 116 PDGSWNAASWFPPSEADDNQKDKEPFKLTGFPVSISKAEIKNGRIQVKVYAKDGAVLMDQ 175

Query: 165 -LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA-----IS 218
              L +  R     + L+  +++ +                K  A    + K        
Sbjct: 176 PFQLDLKGRLKPFAAVLNNLTLREADKENADFLTCKGVYDLKDDAETQVQIKGESPSLAQ 235

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278
            +     L     + +         +P ++         +      L   K  L+   K 
Sbjct: 236 WRALAPGLPDLENLKISLTAQGPLDKPEFTYALRCDPGQTIEGIAGLDLTKEELTAVVKA 295

Query: 279 SDGNVRISRYKLQSILPNSSTDEDN----------KTKVSQDEENLLNFSENGAESMHDL 328
           +   + I +         +                       +  +  +  + + +  + 
Sbjct: 296 TVNGLVIDKLAPSVPGAVNGKIFAGMKGLWPEADIAIDAVLLQSKVFTYDISRSNAFLEY 355

Query: 329 NETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376
           N +   E E       ++ + +++ + N   +     D      F+ D
Sbjct: 356 NRSGHSELEL----TANINQAELKLTANGSAKGLLDQDAPLSVQFNAD 399


>gi|167571137|ref|ZP_02364011.1| hypothetical protein BoklC_14947 [Burkholderia oklahomensis C6786]
          Length = 1397

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/298 (12%), Positives = 81/298 (27%), Gaps = 32/298 (10%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSM 88
            ++R   E   +  +  ++ + G +  H     P V   ++ I  ++       +   + 
Sbjct: 57  DEYRPRIETFVSQKLHAELRI-GRLAPHWSGMQPGVDISNLTIRGRDG-RVALSVPHATA 114

Query: 89  RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILE 140
              +  L      +  + +D P L     + G                        +  E
Sbjct: 115 ALSWRSLARFAPTLSSLVVDNPDLLTERRADGSLFVAGVAVPTTKTGADDTFSAWLLKQE 174

Query: 141 KIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSI----KGSVIAEGTG 195
            I ++GG ++  D + D     L  + + +    +     L   +      G +      
Sbjct: 175 AIVLRGGTLRWRDAQHDAPELALKGIRIAVLNDGIVHRIALQAPANGTLFHGPLDFRARF 234

Query: 196 NFDNKRSAFKIT--------ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
                    K +        +  P     ++    +   AY   ID      + +     
Sbjct: 235 VHKALAPIGKPSNWTGDAYLSTGPVDLPTLARYANIRLTAYAGRIDNAIWAHFADGHLYG 294

Query: 248 SGVFSVAGDFSKL----LNLELSAKKSRLSGNFKISDGN---VRISRYKLQSILPNSS 298
           +G   + G    L        L    +R   +  I       + +SR   +   P   
Sbjct: 295 AGG-ELRGYDVALRVRPTQPRLDIPVARFGWDLAIDPKRDYTLHLSRLHAELGQPPLP 351


>gi|167563993|ref|ZP_02356909.1| hypothetical protein BoklE_15662 [Burkholderia oklahomensis EO147]
          Length = 1397

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/298 (12%), Positives = 81/298 (27%), Gaps = 32/298 (10%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSM 88
            ++R   E   +  +  ++ + G +  H     P V   ++ I  ++       +   + 
Sbjct: 57  DEYRPRIETFVSQKLHAELRI-GRLAPHWSGMQPGVDISNLTIRGRDG-RVALSVPHATA 114

Query: 89  RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILE 140
              +  L      +  + +D P L     + G                        +  E
Sbjct: 115 ALSWRSLARFAPTLSSLVVDNPDLLTERRADGSLFVAGVAVPTTKTGADDTFSAWLLKQE 174

Query: 141 KIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSI----KGSVIAEGTG 195
            I ++GG ++  D + D     L  + + +    +     L   +      G +      
Sbjct: 175 AIVLRGGTLRWRDAQHDAPELALKGIRIAVLNDGIVHRIALQAPANGTLFHGPLDFRARF 234

Query: 196 NFDNKRSAFKIT--------ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
                    K +        +  P     ++    +   AY   ID      + +     
Sbjct: 235 VHKALAPIGKPSNWTGDAYLSTGPVDLPTLARYANIRLTAYAGRIDNAIWAHFADGHLYG 294

Query: 248 SGVFSVAGDFSKL----LNLELSAKKSRLSGNFKISDGN---VRISRYKLQSILPNSS 298
           +G   + G    L        L    +R   +  I       + +SR   +   P   
Sbjct: 295 AGG-ELRGYDVALRVRPTQPRLDIPVARFGWDLAIDPKRDYTLHLSRLHAELGQPPLP 351


>gi|332991707|gb|AEF01762.1| hypothetical protein ambt_01025 [Alteromonas sp. SN2]
          Length = 1123

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 53/388 (13%), Positives = 114/388 (29%), Gaps = 63/388 (16%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFK 67
           +   F +  +    +   +          R  +  +G+ +++     I I PF       
Sbjct: 19  IATYFLLAYLFYALILGLVAPMVLESKAPRILSEQLGRNVSID---NIRINPFLLRARVS 75

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125
              ID+  +         L +   F   L S    +  +Y++ P+  F   S+G ++   
Sbjct: 76  GFSIDEASNDEPFIAFTLLEVDVGFWHTLFSFTPTLEHIYLNAPYARFARVSEGDTSLAS 135

Query: 126 -------------------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY 160
                                            I ++ L K  +  G I + D  +D   
Sbjct: 136 DQDTTVFNFSDIIDTLAKANNDTTEPEAQEQSEIPHIRLGKFRLSNGHISVADYVTDTQL 195

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
              +L+  ++         L+      +  ++ +G  +N  SA   T N   +  A    
Sbjct: 196 DYPELSFTLNNLD-----TLATSLNVDADQSQVSGADNNSLSAKNSTENSSKEESANHYS 250

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280
             L        +   G           +G F V+      L             + KI++
Sbjct: 251 FTLATTEGG-SVQFDGQFQL--SPIDIAGSFEVSQIALAPLWPLSDDMI-----DAKITN 302

Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKK 340
           G +    + L   L  ++              N   F  + A+     ++    ++E  +
Sbjct: 303 GALS---FSLNYHLSENN--------------NDFRFQADNADLSL--SQLVISDKESPR 343

Query: 341 NKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
            K  +L+  D+      ++    +   E
Sbjct: 344 IKLAELRVSDMSLDTETQQVNVANFSLE 371



 Score = 37.9 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 24/285 (8%), Positives = 67/285 (23%), Gaps = 34/285 (11%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQA-------TLIVGKKIAVKGGIKIHILPFP 62
             L +V  V           +  +   E+         +  +          K+      
Sbjct: 543 AILANVQAVSGTIDISQFGLSQLQPYVEQYLNLALEDGSADLSGSFEANSDSKVVFNGQA 602

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           S+    + +          +   L ++          + +  + +D+P+    ++    +
Sbjct: 603 SIA--SLTVIDDLKQEPLLQWADLQIKGIKYNSTDSTLSLEKITLDKPYAKLLIAEDKQT 660

Query: 123 NW---------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           N+                      + K       +  + ++ ++ G I   D  +     
Sbjct: 661 NFSNIVVEQTASPSISTPETKTQPESKQGAHPSADEEVSELVIRIGEIVFNDGSAYFADN 720

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLK 220
                       LN        +   +   +  G  D     A     N   K+  + L 
Sbjct: 721 SLRPRFASGIESLNGSITKLSSNADTAANVDVKGKIDGYAPVALYGAINPLIKDIFLDLT 780

Query: 221 IQLFPLAYPIIIDLFGNLF---WNEKQPIYSGVFSVAGDFSKLLN 262
             +       +    G       ++        + +  +     N
Sbjct: 781 FTVEGAELTSVNPYSGTYMGHFIDKGLLSLDIQYLLEDNQLAGNN 825


>gi|330813749|ref|YP_004357988.1| hypothetical protein SAR11G3_00774 [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486844|gb|AEA81249.1| hypothetical protein SAR11G3_00774 [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 457

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 54/371 (14%), Positives = 118/371 (31%), Gaps = 16/371 (4%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           +  + +  L  + LV  F  PL ++  D++ D E + +  +   I ++G I       P 
Sbjct: 9   KFFLKVATLIVIFLVVIFAAPLALNINDYKSDLENKLSTALNTNIRIEGDIAYTFTLGPK 68

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
           +  K+I  D  E  + +  IE L +      L   +       I          + G  +
Sbjct: 69  LRLKNISFDAGEGNTLDGNIENLYLNVNPFELFKKKFSFKKFSI----------ANGSLS 118

Query: 124 WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD-LNLQISARFLNIISPLSI 182
                    + + +  +KI  K   IKI++  S+  +  +D + L  S   +      + 
Sbjct: 119 VSDDFFKSYIQNKLQFKKITFKNMDIKIVNNLSEIKFDSNDGVFLFNSQNLVTAKLHGTF 178

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242
            ++   +  +     +      K++     ++   +        +  ++   F N +   
Sbjct: 179 SNLLYDLKYK-NNKLEISIPEIKLSLEHVRRDLTNNNGFVKIKFSEKLLFPGFRNTYIKS 237

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAK-KSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
              + +    +              K   + +      + +++  R        +     
Sbjct: 238 DILLANSKLELNNAKISSAIYNGIGKVSLQKNNGLAFINADLKFGRSNFSRASESDWVSF 297

Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEK 361
            NK           NF  N      D N  D   + +      D+  + IQ+S +K    
Sbjct: 298 FNKEIFQIASLMNGNFKINFQNVFLDRNYFDKV-DLDISLNGGDIVLNQIQFSSDK--NS 354

Query: 362 DNSHDKENQEN 372
                +  QEN
Sbjct: 355 LVLSGRFVQEN 365


>gi|323496110|ref|ZP_08101170.1| putative exported protein [Vibrio sinaloensis DSM 21326]
 gi|323318854|gb|EGA71805.1| putative exported protein [Vibrio sinaloensis DSM 21326]
          Length = 1289

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/368 (10%), Positives = 97/368 (26%), Gaps = 38/368 (10%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTV-PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           ++R +L G   +  ++ +    +         F++  +   +   G  + +         
Sbjct: 8   LIRFLLWGAVTVLVLLAIAVTALRITLPQLNHFQQPIKSWISDRSGFDLEIAEINGFWRN 67

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN---FY 115
             PS+  + +++   E          + +  + +  LL  +  V D+ I Q  L+     
Sbjct: 68  THPSISLQGVQVHTPESSDINFSANKIEVELDLIQSLLQQQPVVADLSIHQLELDMTSVE 127

Query: 116 LSSKGVSNWFQRKSTMDMIHNVILEKIHVKG-------GRIKIIDQESDQVYFLSDLNLQ 168
                        +         L+ + ++          I +          L    L+
Sbjct: 128 TVKNEQDKPVLEPTGSQKDVIQQLDSLLLRQLDDFSLLDSIILFQGIDGADRQLDIAKLR 187

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
                 + ++   I        A+   N    ++ F    +    +    L  Q   +  
Sbjct: 188 WQNNGRHHLADGEISI------ADSRINSALVKANFVDNGSLTDVSGEFYLSAQNVLVTP 241

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
            +   L       + Q  ++G  ++         LEL A                  S  
Sbjct: 242 WLTEYLKTETGIEKGQLSFNGWLTLRHSKPVNAYLELEA------------------SEL 283

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE-TDFFEEEEKKNKNDDLK 347
                  +    E    ++   E      + +      D  E  +     + + +   L 
Sbjct: 284 IWHEGQTHELFIESGVLELDPTEL-GWQVNAHSLRLRTDETEWPELDMAFDWQPEQWRLN 342

Query: 348 KDDIQYSV 355
              +  + 
Sbjct: 343 VSQLDIAA 350


>gi|292490678|ref|YP_003526117.1| hypothetical protein Nhal_0546 [Nitrosococcus halophilus Nc4]
 gi|291579273|gb|ADE13730.1| conserved hypothetical protein [Nitrosococcus halophilus Nc4]
          Length = 1286

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/289 (12%), Positives = 83/289 (28%), Gaps = 20/289 (6%)

Query: 2   LRRVLIGLGFLF---SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58
           LR     LG L      ++   + +   +          R  +  +G+++ + G I +  
Sbjct: 8   LRWFYFSLGILAFCTVSIVGMLWVLWATVGEEP--ATASRWLSTFLGREVQI-GHIDLSW 64

Query: 59  -LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYL 116
               P +   ++R+   +            +       L  GE     + I    L    
Sbjct: 65  RGLEPKLRLTEVRVLDPKTEEQLLSFREAYLGTAPYRSLIEGEWLPRHLTIMGGQLTVER 124

Query: 117 SSKG--------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
             +G                        + L ++ +    I+ +D   ++      L+L+
Sbjct: 125 KPEGCVRVHGLQSLEAPCPDPPRLPAWLLELTQLTLVDVDIRWLDPALERK----PLSLK 180

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
           +   +L     L     K ++  E       K      +         + LK +   LA 
Sbjct: 181 VEELWLKNKGDLHQVEGKATLPEEFGREIAIKAKFTGRSIRGFESKGTLHLKGESLQLAP 240

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
               D    L++ + +         +    +   ++   K  ++ G  +
Sbjct: 241 WYPHDFLYGLYFTQGRGNLELGLRWSKAALRQAVVKFDWKSLQIVGKAQ 289


>gi|167580677|ref|ZP_02373551.1| hypothetical protein BthaT_21158 [Burkholderia thailandensis TXDOH]
          Length = 1397

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 84/305 (27%), Gaps = 35/305 (11%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V   ++ I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISNLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERHADGSLFVAGVAVPTTKAGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSI---- 185
                 +  E I ++GG ++  D + D     L  + + +    +     L   +     
Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAPELALKGIRIAVLNDGIVHRIALQAPANGTLF 224

Query: 186 KGSVIAEGTGNFDNKRSAFKIT--------ANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
            G +               K +        +  P     ++  + +   AY   ID    
Sbjct: 225 HGPLDFRARFVHKALAPIGKPSNWTGDAYLSTGPVDLPTLARYMNIRLTAYAGRIDNAIW 284

Query: 238 LFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKSRLSGNFKISDGN---VRISRYKL 290
             + +     +G   + G    L        L    +R   +  I       + +SR   
Sbjct: 285 AHFGDGHLYSAGG-ELRGYDVALRVRPTQPRLDIPVARFGWDLAIDPKRDYTLHLSRLHA 343

Query: 291 QSILP 295
           +   P
Sbjct: 344 ELGQP 348


>gi|313500612|gb|ADR61978.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 978

 Score = 68.8 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/331 (9%), Positives = 91/331 (27%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + L         ++     +   I          +Q          ++   +I + PF
Sbjct: 1   MYKGLTRAAGAIVALVALYSLLGFLILPGVALRIANQQLAQYATVPAHLE---RIELNPF 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    ++I +   G  +   E L   A    L +  + +  + +D+P      +  G
Sbjct: 58  SLELTLWGLQIGEP--GKEQVGFERLYANASLDSLWTKALHLEAVELDKPRNEVLFAKDG 115

Query: 121 VSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168
             N            + +        + +  I +  G +   D    +       ++NL+
Sbjct: 116 TLNLTGLFKLPASEAKPEEPPSDPFPLRIGSIKLVDGYLHFKDLRPSEPIEFLYDNMNLE 175

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           +            +  +      G +  +GT +     S   +           P    A
Sbjct: 176 LKNLSTLPNDNADMTLVASGPNGGRIDWKGTLSLSPIASEGTLKVTDGKMKLFWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   ++      L             S   +     +             +S   
Sbjct: 236 VPLVLEDGVVSLDTHYKLNLAKQTELLLDKVSVRIAPFAIKAPDGRPLARLASLEVSETT 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             +    V + + + + +   ++ ++D +  
Sbjct: 296 IDLVKQQVTVGKVRSEKLETWAALEKDGQLD 326


>gi|313109715|ref|ZP_07795655.1| hypothetical protein PA39016_002040012 [Pseudomonas aeruginosa
           39016]
 gi|310882157|gb|EFQ40751.1| hypothetical protein PA39016_002040012 [Pseudomonas aeruginosa
           39016]
          Length = 1089

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/332 (11%), Positives = 95/332 (28%), Gaps = 32/332 (9%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M + +   +  L    LV      L I     R    +Q          ++   +I   P
Sbjct: 1   MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLR-VANQQLAQYATVPARLE---RIEFNP 56

Query: 61  F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           F   +    +R+ ++++   +     L    +   L   ++ + D+ ++ PH       K
Sbjct: 57  FSLELTLWGLRLGEEKN--PQLAFRRLYANLQLDSLWKRQLHLADVELEGPHTELLFDEK 114

Query: 120 GVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS------ 163
           G  N                       + +++I +  G +   D    +    S      
Sbjct: 115 GQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPVDFSFDPLGF 174

Query: 164 DL-NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR-------SAFKITANFPAKNK 215
           +L NL         ++ L+     G +  EG                  ++ A +P    
Sbjct: 175 ELHNLSTLPDDGAKMTLLATGPNGGRLDWEGDLTLVPITSRGHLSVKDIQLKAWWPYVRD 234

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG- 274
              L ++   ++      L  +          +   +     S             ++  
Sbjct: 235 NAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSINSPQGKPLAKLASLDVAAT 294

Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
              ++   V +   + Q +   ++ ++D +  
Sbjct: 295 TLDLAKQEVVLGEVRSQGLEAWAAREKDGQLD 326


>gi|83720856|ref|YP_441845.1| hypothetical protein BTH_I1298 [Burkholderia thailandensis E264]
 gi|257138014|ref|ZP_05586276.1| hypothetical protein BthaA_02169 [Burkholderia thailandensis E264]
 gi|83654681|gb|ABC38744.1| conserved hypothetical protein TIGR02099 [Burkholderia
           thailandensis E264]
          Length = 1397

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 84/305 (27%), Gaps = 35/305 (11%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V   ++ I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISNLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERHADGSLFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSI---- 185
                 +  E I ++GG ++  D + D     L  + + +    +     L   +     
Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAPELALKGIRIAVLNDGIVHRIALQAPANGTLF 224

Query: 186 KGSVIAEGTGNFDNKRSAFKIT--------ANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
            G +               K +        +  P     ++  + +   AY   ID    
Sbjct: 225 HGPLDFRARFVHKALAPIGKPSNWTGDAYLSTGPVDLPTLARYVNIRLTAYAGRIDNAIW 284

Query: 238 LFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKSRLSGNFKISDGN---VRISRYKL 290
             + +     +G   + G    L        L    +R   +  I       + +SR   
Sbjct: 285 AHFGDGHLYSAGG-ELRGYDVALRVRPTQPRLDIPVARFGWDLAIDPKRDYTLHLSRLHA 343

Query: 291 QSILP 295
           +   P
Sbjct: 344 ELGQP 348


>gi|239813089|ref|YP_002941999.1| hypothetical protein Vapar_0070 [Variovorax paradoxus S110]
 gi|239799666|gb|ACS16733.1| conserved hypothetical protein [Variovorax paradoxus S110]
          Length = 446

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/320 (12%), Positives = 92/320 (28%), Gaps = 19/320 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAF--TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           LRR LIG+  +  +                 +             G  + + G     + 
Sbjct: 5   LRRWLIGIAAVLLLGTGALLWVASTHLPSDEEVAARIAEGFEKRFGVGLKIGG-AHWALW 63

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL---NFYL 116
           P P +   D+  +Q         +  ++++ +   LL   + + ++ I+   L   +   
Sbjct: 64  PSPVLVLSDLATEQPRP----VTLRRITVQLKLRELLRRVVAIDEVEIESLVLPRESVRA 119

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR---IKIIDQESDQVYFLSDLNLQISARF 173
              G     +    + +     L  + ++  R   +  ID+ +  + +  ++      R 
Sbjct: 120 IRGGSPKPKEDGRIVALPAPWTLAPVPLEKLRWRDLVWIDRRNMALAYDGEITFDAGWRP 179

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL-----KIQLFPLAY 228
                  +  S    +  +     D  R+   I                   +++     
Sbjct: 180 RQARIERAGASPPARLRLDRAAGQDRWRTRIDIGGGTANGVAWFETLPPNDLLRVSAELE 239

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
           P  +D+ G L    ++   +G  S           E+ A    L      S     ++R 
Sbjct: 240 PRQVDIEGMLQAFGRRSAVAGKAS-GQSMLVAEAEEVGALLRSLRTRTTFSVQPATLTRL 298

Query: 289 KLQSILPNSSTDEDNKTKVS 308
            L   +  +       T + 
Sbjct: 299 DLAKAVTTAGISRGGTTPLD 318


>gi|255010098|ref|ZP_05282224.1| hypothetical protein Bfra3_13240 [Bacteroides fragilis 3_1_12]
 gi|313147893|ref|ZP_07810086.1| outer membrane assembly protein [Bacteroides fragilis 3_1_12]
 gi|313136660|gb|EFR54020.1| outer membrane assembly protein [Bacteroides fragilis 3_1_12]
          Length = 988

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/342 (11%), Positives = 107/342 (31%), Gaps = 43/342 (12%)

Query: 3   RRVLIGLGFLFS-----VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           +++L   G         +++  AF +   +            A   +   + ++  +++ 
Sbjct: 6   KKILKISGITLGSVLLVLLVAIAFVINFIVTPKKLTPVVLDAANQTLNAHLDME-SVELT 64

Query: 58  IL---PFPSVFFKDIRI-------DQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMY 106
                P   +  K+  +                   +   +    +   +   I V ++ 
Sbjct: 65  FFSTFPQFGLKVKNGSLVSRTLNDSNWCKTDSLLSFKECVLTVNPVAYWTENRIVVHNLS 124

Query: 107 IDQPHLNFYLSSKGVSNWFQRKSTMDMIH----------NVILEKIHVKGGRIKIIDQES 156
           +D+  +  Y    G +NW   +++ D I            + +  I +K   +   D+ +
Sbjct: 125 LDEVSVYAYRDKAGQANWEVTRASADTIPEDTVSADFNSEIDIRNIELKHANLIFDDRNT 184

Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA--EGTGNFDNKRSAFKITANFPAKN 214
           D    + D NL++       +S L +     +++   +G    +   ++ +       + 
Sbjct: 185 DIYSRIDDANLKLRLSLTKGVSTLGLKFDNKNILFWQQGELLVNKIATSLRTDITVDRQT 244

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY--SGVFSVAGDFSKL----------LN 262
               LK         I +D+ G    +           + +     +            +
Sbjct: 245 AVWKLK-DTELNVNGIQLDVNGAFRRDTVAKTIGMDLEYGLHAPSMETVLRMIPKAYVKD 303

Query: 263 LELSA-KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
            ++SA  +  +SG  +   G+ ++    L+  +  +S     
Sbjct: 304 SKVSAKGEVTVSGRVRGVYGDKKLPAVSLKIGIKEASAQYKG 345


>gi|167825683|ref|ZP_02457154.1| hypothetical protein Bpseu9_18572 [Burkholderia pseudomallei 9]
          Length = 838

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 68/222 (30%), Gaps = 15/222 (6%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 +  E I ++GG ++  D + D    L+   ++I+     I+  +++ +     +
Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGIVHRIALQAPANGTL 223

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             G  +F  +     +       N      +   P+  P + 
Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265


>gi|330877221|gb|EGH11370.1| hypothetical protein PSYMP_17171 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 987

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/331 (10%), Positives = 91/331 (27%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + L         V+V    +  FI          +Q          ++   ++   P+
Sbjct: 1   MSKGLKRTLGSLLAVIVLYSLLGFFILPGVALRIANQQLANYSTVPARLE---RLEFNPY 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 58  TLELTLWGLNIGTP--GKEQVAFEKLYANLQIDSLWTKALHLQRVELIKPKAELLFDKQG 115

Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168
             N             +         + + +I +  G +   D    Q        LN +
Sbjct: 116 KLNLAQLFKLPASEPAKDQPPGKPFPLRIGEIKLADGYVHFQDVRPSQPIEFLYDALNFE 175

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           +            +  +      G +   G  +     S   +           P    A
Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLVPITSEGTLKVTDGKMKLWWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L  +     K    S   +     S      +  ++  +S  +
Sbjct: 236 LPLALENGVLNFSTAYKLDLSKETELKLTNLSASVAPFALNSPDGRPLVRLQRLDVSETS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + Q +   ++ + D +  
Sbjct: 296 VDLARQLVTVGKIRSQKLETWAAREADGQLD 326


>gi|148549771|ref|YP_001269873.1| hypothetical protein Pput_4569 [Pseudomonas putida F1]
 gi|148513829|gb|ABQ80689.1| protein of unknown function DUF748 [Pseudomonas putida F1]
          Length = 978

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/331 (9%), Positives = 92/331 (27%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + L         ++     +   I          +Q          ++   +I + PF
Sbjct: 1   MYKGLTRAAGAIVALVALYSLLGFLILPGVALRIANQQLAQYATVPAHLE---RIELNPF 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    ++I +   G  +   E L   A    L +  + +  + +D+P      +  G
Sbjct: 58  SLELTLWGLQIGEP--GKEQVGFERLYANASLDSLWTKALHLEAVELDKPRNEVLFAKDG 115

Query: 121 VSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168
             N            + +        + +  I +  G +   D    +       ++NL+
Sbjct: 116 TLNLTGLFKLPASEAKPEEPPSDPFPLRIGSIKLVDGYLHFEDLRPSEPIEFLYDNMNLE 175

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           +            +  +      G +  +GT +     S   +           P    A
Sbjct: 176 LKNLSTLPNDNADMTLVASGPNGGRIDWKGTLSLSPIASEGTLKVTDGKMKLFWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   ++      L             S   +     +             +S  +
Sbjct: 236 VPLVLEDGVVSLDTHYKLNLAKQTELLLDNVSVRIAPFAIKAPDGRPLARLASLEVSETS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             +    V + + + + +   ++ ++D +  
Sbjct: 296 IDLVKQQVTVGKVRSEKLETWAALEKDGQLD 326


>gi|218893830|ref|YP_002442699.1| hypothetical protein PLES_51201 [Pseudomonas aeruginosa LESB58]
 gi|218774058|emb|CAW29874.1| hypothetical protein PLES_51201 [Pseudomonas aeruginosa LESB58]
          Length = 1090

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/332 (11%), Positives = 94/332 (28%), Gaps = 32/332 (9%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M + +   +  L    LV      L I     R    +Q          ++   +I   P
Sbjct: 1   MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLR-VANQQLAQYATVPARLE---RIEFNP 56

Query: 61  F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           F   +    +R+  +++   +     L    +   L   ++ + D+ ++ PH       K
Sbjct: 57  FSLELTLWGLRLGDEKN--PQLAFRRLYANLQLDSLWKRQLHLADVELEGPHTELLFDEK 114

Query: 120 GVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS------ 163
           G  N                       + +++I +  G +   D    +    S      
Sbjct: 115 GQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPVDFSFDPLGF 174

Query: 164 DL-NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR-------SAFKITANFPAKNK 215
           +L NL         ++ ++     G +  EG                  ++ A +P    
Sbjct: 175 ELHNLSTLPDDGAKMTLVATGPNGGRLDWEGDLTLMPITSRGHLSVKDIQLKAWWPYVRD 234

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG- 274
              L ++   ++      L  +          +   +     S             ++  
Sbjct: 235 NAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSINSPQGKPLAKLASLDVAAT 294

Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
              ++   V +   + Q +   ++ ++D +  
Sbjct: 295 TLDLAKQEVVLGEVRSQGLEAWAAREKDGQLD 326


>gi|254787697|ref|YP_003075126.1| hypothetical protein TERTU_3829 [Teredinibacter turnerae T7901]
 gi|237685767|gb|ACR13031.1| conserved hypothetical protein [Teredinibacter turnerae T7901]
          Length = 1600

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/349 (13%), Positives = 102/349 (29%), Gaps = 39/349 (11%)

Query: 2   LRRVLIGL-GFLFSVVLVGAFTVPL----FIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +RR++    G LF++V+  A  V L    F    D+R+D  R     +G KI + G +  
Sbjct: 1   MRRLVKRFWGTLFTLVIATAVLVQLGREAFPLLNDYRDDISRLIGDQLGVKIHI-GELAA 59

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNF 114
                 P V   D+ +D  +D     +I   SM    +  L   ++    +         
Sbjct: 60  TWAGLRPKVDLIDVSVDSLDD-QPIFRIREASMELSLVESLAKRQVAWRQLAFKDLQTTL 118

Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILE----------KIHVKGGRIKIIDQESDQ-VYFLS 163
                G       K+T+       ++          ++ +   +  +  +   Q    + 
Sbjct: 119 VQQDTGPWQIKNLKTTVKSDRKFRIDDPLDIFLVGRRVEIDNAQFALEFRTGHQSSLQIP 178

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
           ++ L+    F  I +  +++  +   +             F            +   +  
Sbjct: 179 NIMLENDKDFHRIRASAAVEGRQHFTLISEGIGDPRDPDNFDAKGYVSLNQFPMEQVLAA 238

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
           F   +       G+  W E            G  ++           +LSGN +     +
Sbjct: 239 FAGDWWRE---QGSHQWAEG-HRLDLQLWYQGSSTRGY---------KLSGNLRADGLPL 285

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETD 332
            +      S+   +  D       S   ++                ++ 
Sbjct: 286 AVPETV--SLPTGTQADITG----SWTPKDGWRLMLQHLLIDWPEGQSP 328


>gi|167035694|ref|YP_001670925.1| hypothetical protein PputGB1_4703 [Pseudomonas putida GB-1]
 gi|166862182|gb|ABZ00590.1| protein of unknown function DUF748 [Pseudomonas putida GB-1]
          Length = 978

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/331 (10%), Positives = 96/331 (29%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + L         ++     +   I          +Q          ++   +I + PF
Sbjct: 1   MYKGLTRATGAIVALVALYSLLGFLILPGVALRIANQQLAQYATVPAHLE---RIELNPF 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    ++I +   G  +   E L        L +  + +  + +D+P      +  G
Sbjct: 58  SLELTLWGLQIGEP--GKEQVAFERLYANLSLDSLWTKALHLEAVELDKPRNEVLFAKDG 115

Query: 121 VSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166
             N            +          + +  I +  G +   DQ   +         +L 
Sbjct: 116 ALNLTGLFKLPASEAKPDEPPSDPFPLRIGSIKLVDGYLHFEDQRPSEPIEFLYDNMNLE 175

Query: 167 LQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           L+  +   N  + +S+ ++    G +  +GT +     S   +           P    A
Sbjct: 176 LKNLSTLPNDNADMSLVALGPNGGRIDWKGTLSLAPIASEGTLKVTEGKMKAFWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   ++      L        +    S   +     +             +S  +
Sbjct: 236 VPLVLEDGVISLDTHYKLNLAQQTELQLDNASVRIAPFAIKAPDGRPLARLASLEVSETS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             +    V + + + + +   ++ ++D +  
Sbjct: 296 VDLVKQLVTVGKIRSEKLETWAALEKDGQLD 326


>gi|325286836|ref|YP_004262626.1| putative outer membrane protein [Cellulophaga lytica DSM 7489]
 gi|324322290|gb|ADY29755.1| putative outer membrane protein [Cellulophaga lytica DSM 7489]
          Length = 912

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 51/405 (12%), Positives = 110/405 (27%), Gaps = 50/405 (12%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK----- 55
           M +++L  +G +  +++V     P F      +   E+     V   I            
Sbjct: 1   MKKKILKIIGVVVLLIVVLLIAAPFF-----LQGKIEKIIKDKVNNNIEATLDFASADLS 55

Query: 56  -IHILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSG---EIRVFDMYIDQ 109
                P   V   ++ +       G      + +++      L       I +  + +D 
Sbjct: 56  LFSSFPNAKVTINELVLTNNAPFKGDTLFASKEIALDMAITELFKDSSEAIGIKSLAVDG 115

Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMI-----------HNVILEKIHVKGGRIKIIDQESDQ 158
             LN  ++   ++N+   K                   + +E   +   +I  +DQ S  
Sbjct: 116 AALNIIVNKDSIANYDIAKKDTAEPVVSETEEEGSSFTLAMESYKITNSKIVYVDQTSGM 175

Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217
              L+DL    +       S L   +    S    GT   +  +           K    
Sbjct: 176 ALALTDLQHSGTGDLSLEKSELDTKTNALVSFGMGGTNYLNRNKVGLDALIGIDLKESKF 235

Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
           S  ++   L   + +   G +  NE     +  F       K     +  + ++      
Sbjct: 236 SF-LKNEALVNQLPLVFDGFVKINEDNQEVNINFKTLSSEFKNFLALVPEEYTK------ 288

Query: 278 ISDGNVRISRYKLQSILPNSSTDEDNKTK--VSQDEENLLNFSENGAESMHDLNETDFFE 335
                       ++++        + K    V +      +   N   +     +     
Sbjct: 289 -----------SIENVKTTGKFTVEGKLDGIVDETHIPKFSVKLNSDNASFKYPDLPKAV 337

Query: 336 EEEKKNKNDDLKKDDIQYSVN--KKEEKDNSHDKENQENFSGDKM 378
                N   D     ++ +    KK       D+ N  +   D M
Sbjct: 338 TNIFINAAIDNTTGLVEDTSVDIKKLAFAIDQDRFNLNSQITDLM 382


>gi|167817273|ref|ZP_02448953.1| hypothetical protein Bpse9_19189 [Burkholderia pseudomallei 91]
          Length = 843

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 68/222 (30%), Gaps = 15/222 (6%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 +  E I ++GG ++  D + D    L+   ++I+     I+  +++ +     +
Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGIVHRIALQAPANGTL 223

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             G  +F  +     +       N      +   P+  P + 
Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265


>gi|107103834|ref|ZP_01367752.1| hypothetical protein PaerPA_01004905 [Pseudomonas aeruginosa PACS2]
          Length = 1088

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 97/335 (28%), Gaps = 38/335 (11%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M + +   +  L    LV      L I     R    +Q          ++   +I   P
Sbjct: 1   MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLR-VANQQLAQYATVPARLE---RIEFNP 56

Query: 61  F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           F   +    +R+ ++++   +     L    +   L   ++ + D+ ++ PH       K
Sbjct: 57  FSLELTLWGLRLGEEKN--PQLAFRRLYANLQLDSLWKRQLHLADVELEGPHTELLFDEK 114

Query: 120 GVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
           G  N                       + +++I +  G +   D    +     D +   
Sbjct: 115 GQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPV---DFSFDP 171

Query: 170 SARFLNIISPLSIDSIKGSVIA----EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
               L+ +S L  D  K +++A     G  +++   +   IT+      K I LK     
Sbjct: 172 LGFELHNLSTLPDDGAKMTLVATGPNGGRLDWEGDLTLVPITSRGHLSVKDIQLKAWWPY 231

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN---------- 275
           +     + L   +                    K          +   G           
Sbjct: 232 VRDNAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSINSPQGKPLAKLASLDV 291

Query: 276 ----FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
                 ++   V +   + Q +   ++ ++D +  
Sbjct: 292 AATTLDLAKQEVVLGEVRSQGLEAWAAREKDGQLD 326


>gi|331016657|gb|EGH96713.1| hypothetical protein PLA106_11510 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 987

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/386 (9%), Positives = 102/386 (26%), Gaps = 45/386 (11%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + L         V+V    +  FI          +Q          ++   ++   P+
Sbjct: 1   MSKGLKRTLGSLLAVIVLYSLLGFFILPGVALRIANQQLANYSTVPAKLE---RLEFNPY 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 58  TLELTLWGLNIGTP--GKEQVAFEKLYANLQIDSLWTKALHLQRVELIKPKAELLFDKQG 115

Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168
             N             +         + + +I +  G +   D    +        LN +
Sbjct: 116 KLNLAQLFKLPASEPAKDQPPSKPFPLRIGEIKLADGYVHFQDVRPSEPIEFLYDALNFE 175

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           +            +  +      G +   G  +     S   +           P    A
Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLVPITSEGTLKVTDGKMKLWWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L  +     K    S   +     +      +  ++  +S  +
Sbjct: 236 LPLALENGVLNFSTAYKLDLSKETELKLTNLSASVAPFALNTPDGRPLVRLQRLDVSETS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335
             ++   V + + + Q++   ++ + D +               +  +   +        
Sbjct: 296 VDLARQLVSVGKIRSQTLETWAAREVDGQ--------------LDWQKLFANPPGKPAAP 341

Query: 336 EEEKKNKNDDLKKDDIQYSVNKKEEK 361
           ++   ++         Q S     + 
Sbjct: 342 KKPAVDEKAAEPAPAPQTSAQASTQP 367


>gi|291532191|emb|CBL05304.1| Uncharacterized protein conserved in bacteria [Megamonas
           hypermegale ART12/1]
          Length = 830

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 54/378 (14%), Positives = 116/378 (30%), Gaps = 26/378 (6%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFRED----FERQATLIVGKKIAVKGGIKI 56
           M ++  I +G    ++   +    L+I+   F+++      +Q   I+G KI +     +
Sbjct: 1   MQKKSKIIVGASVFIIFCISLMTFLWINSQSFKQETANLISKQVENILGTKININ---SL 57

Query: 57  HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRV--FDMYIDQPHLNF 114
           +I+   S    D+ I  KE+    +K + +    +F  +L         ++ +  P +N 
Sbjct: 58  YIVSTNSAAIDDVEIYDKENEL-IAKADKVVFTIDFWQILRQSPLAGLSEVDVINPEVNI 116

Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS-ARF 173
              S G  N                  + V+ G+ K+  +   +   +  +NL+   A  
Sbjct: 117 IQRSDGSWNVEDLIDKDSDTPVDFKGIVKVENGQSKL--RFEGKQLSIDKINLEADCADL 174

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL----KIQLFPLAYP 229
             I    S++     V  +G    +  ++  +I A      K +       +    +   
Sbjct: 175 TAINLDGSLNHEDALVEFDGVVG-EVIKTNLEIKAQDLDILKYLPFIPEEYLANVNIKQG 233

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
            I      +  N +          +  F       L      + G   +++ N+++    
Sbjct: 234 FINKANITISGNLEN---QYTLDGSVSFVDGACEVLGQNVEDIRGIILLNNKNIQL---- 286

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF-FEEEEKKNKNDDLKK 348
             S          +        E  L           +L      F  E           
Sbjct: 287 FVSGSAQGQKVAVHGNIEDYMTEPRLRLIAESKSFRPELFIEGIPFNGEVSFVSAIYGTL 346

Query: 349 DDIQYSVNKKEEKDNSHD 366
           DDI+       +    +D
Sbjct: 347 DDIRIGAQVNSKLGYIYD 364


>gi|170723438|ref|YP_001751126.1| hypothetical protein PputW619_4277 [Pseudomonas putida W619]
 gi|169761441|gb|ACA74757.1| conserved hypothetical protein [Pseudomonas putida W619]
          Length = 1269

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 99/297 (33%), Gaps = 19/297 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60
           R  +G+  L +V++    ++   +     ++R D E +A   +G  + V G ++      
Sbjct: 13  RWGLGICALLAVLVALYVSLGRELVPLVAEYRADLESKAEQALGLPVHV-GALEGRWSGL 71

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSK 119
            P +  +D+++ +   G+   +++ + +  +    L+  E+R+  + +    L    + +
Sbjct: 72  APVLRVRDLQLGE---GASALRLDDVKLVPDLWASLTAREVRLARIQLAGLQLILRENEQ 128

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
           G           D   +       ++  GRI   D +     +  D           +  
Sbjct: 129 GGWALEGLPKKDDAPLDPAEVLQRLQQLGRIDAFDSQVTLQPWQRD-----PLTLTYVSF 183

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235
            L   + + ++    T   D +  A  + +       ++      + L    +   +   
Sbjct: 184 GLQAGASRQALDLRATLP-DGQPLALNLRSRVTPQAWRDGKAEAYLSLPQSDWARWLPPR 242

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
               W  +     G F V     +L    +     +L G +      V +    L +
Sbjct: 243 LLGQWQAQALRAGGEFWVDWGEGRLQQAVVRLNAPQLRGAY-AQRQAVTLDNLALSA 298


>gi|167740058|ref|ZP_02412832.1| hypothetical protein Bpse14_18498 [Burkholderia pseudomallei 14]
          Length = 853

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 83/305 (27%), Gaps = 35/305 (11%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSI---- 185
                 +  E I ++GG ++  D + D     L+ + + +    L     L   +     
Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAPELALTGIRIAVLNDGLVHRIALQAPANGTLF 224

Query: 186 KGSVIAEGTGNFDNKRSAFKIT--------ANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
            G +               K +        +  P     ++    +   AY   ID    
Sbjct: 225 HGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLARYANIRVTAYAGRIDNAIW 284

Query: 238 LFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKSRLSGNFKISDGN---VRISRYKL 290
             + +     +G   + G    L        L    +R   +  I       + +SR   
Sbjct: 285 AHFGDGHLYRAGG-ELRGYDVALRVRPTQPRLDIPVARFGWDVAIDPKRDYTLHLSRLHA 343

Query: 291 QSILP 295
           +   P
Sbjct: 344 ELGQP 348


>gi|167721087|ref|ZP_02404323.1| hypothetical protein BpseD_18911 [Burkholderia pseudomallei DM98]
          Length = 857

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 83/305 (27%), Gaps = 35/305 (11%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSI---- 185
                 +  E I ++GG ++  D + D     L+ + + +    L     L   +     
Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAPELALTGIRIAVLNDGLVHRIALQAPANGTLF 224

Query: 186 KGSVIAEGTGNFDNKRSAFKIT--------ANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
            G +               K +        +  P     ++    +   AY   ID    
Sbjct: 225 HGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLARYANIRVTAYAGRIDNAIW 284

Query: 238 LFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKSRLSGNFKISDGN---VRISRYKL 290
             + +     +G   + G    L        L    +R   +  I       + +SR   
Sbjct: 285 AHFGDGHLYRAGG-ELRGYDVALRVRPTQPRLDIPVARFGWDVAIDPKRDYTLHLSRLHA 343

Query: 291 QSILP 295
           +   P
Sbjct: 344 ELGQP 348


>gi|254238528|ref|ZP_04931851.1| hypothetical protein PACG_04680 [Pseudomonas aeruginosa C3719]
 gi|126170459|gb|EAZ55970.1| hypothetical protein PACG_04680 [Pseudomonas aeruginosa C3719]
          Length = 1090

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 97/335 (28%), Gaps = 38/335 (11%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M + +   +  L    LV      L I     R    +Q          ++   +I   P
Sbjct: 1   MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLR-VANQQLAQYATVPAHLE---RIEFNP 56

Query: 61  F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           F   +    +R+ ++++   +     L    +   L   ++ + D+ ++ PH       K
Sbjct: 57  FSLELTLWGLRLGEEKN--PQLAFRRLYANLQLDSLWKRQLHLADVELEGPHTELLFDEK 114

Query: 120 GVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
           G  N                       + +++I +  G +   D    +     D +   
Sbjct: 115 GQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPV---DFSFDP 171

Query: 170 SARFLNIISPLSIDSIKGSVIA----EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
               L+ +S L  D  K +++A     G  +++   +   IT+      K I LK     
Sbjct: 172 LGFELHNLSTLPDDGAKMTLVATGPNGGRLDWEGDLTLVPITSRGHLSVKDIQLKAWWPY 231

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN---------- 275
           +     + L   +                    K          +   G           
Sbjct: 232 VRDNAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSINSPQGKPLAKLASLDV 291

Query: 276 ----FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
                 ++   V +   + Q +   ++ ++D +  
Sbjct: 292 AATTLDLAKQEVVLGEVRSQGLEAWAAREKDGQLD 326


>gi|213966640|ref|ZP_03394791.1| hypothetical protein PSPTOT1_0398 [Pseudomonas syringae pv. tomato
           T1]
 gi|213928490|gb|EEB62034.1| hypothetical protein PSPTOT1_0398 [Pseudomonas syringae pv. tomato
           T1]
          Length = 1002

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/331 (10%), Positives = 90/331 (27%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + L         V+V    +  FI          +Q          ++   ++   P+
Sbjct: 16  MSKGLKRTLGSLLAVIVLYSLLGFFILPGVALRIANQQLANYSTVPARLE---RLEFNPY 72

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 73  TLELTLWGLNIGTP--GKEQVAFEKLYANLQIDSLWTKALHLQRVELIKPKAELLFDKQG 130

Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168
             N             +         + + +I +  G +   D    +        LN +
Sbjct: 131 KLNLAQLFRLPASEPAKDQPPSKPFPLRIGEIKLADGYVHFQDVRPSEPIEFLYDALNFE 190

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           +            +  +      G +   G  +     S   +           P    A
Sbjct: 191 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLVPITSEGTLKVTDGKMKLWWPYVRDA 250

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L  +     K    S   +     +      +  +   +S  +
Sbjct: 251 LPLALENGVLNFSTAYKLDLSKETELKLTNLSASVAPFALNTPDGRPLVRLQHLDVSETS 310

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + Q +   ++ + D +  
Sbjct: 311 VDLARQLVSVGKIRSQKLETWAAREADGQLD 341


>gi|116052882|ref|YP_793199.1| hypothetical protein PA14_62650 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115588103|gb|ABJ14118.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 1088

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 96/335 (28%), Gaps = 38/335 (11%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M + +   +  L    LV      L I     R    +Q          ++   +I   P
Sbjct: 1   MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLR-VANQQLAQYATVPARLE---RIEFNP 56

Query: 61  F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           F   +    +R+  +++   +     L    +   L   ++ + D+ ++ PH       K
Sbjct: 57  FSLELTLWGLRLGDEKN--PQLAFRRLYANLQLDSLWKRQLHLADVELEGPHTELLFDEK 114

Query: 120 GVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
           G  N                       + +++I +  G +   D    +     D +   
Sbjct: 115 GQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPV---DFSFDP 171

Query: 170 SARFLNIISPLSIDSIKGSVIA----EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
               L+ +S L  D  K +++A     G  +++   +   IT+      K I LK     
Sbjct: 172 LGFELHNLSTLPDDGAKMTLVATGPNGGRLDWEGDLTLVPITSRGHLSVKDIQLKAWWPY 231

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN---------- 275
           +     + L   +                    K          +   G           
Sbjct: 232 VRDNAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSINSPQGKPLAKLASLDV 291

Query: 276 ----FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
                 ++   V +   + Q +   ++ ++D +  
Sbjct: 292 AATTLDLAKQEVVLGEVRSQGLEAWAAREKDGQLD 326


>gi|262383286|ref|ZP_06076422.1| outer membrane assembly protein [Bacteroides sp. 2_1_33B]
 gi|262294184|gb|EEY82116.1| outer membrane assembly protein [Bacteroides sp. 2_1_33B]
          Length = 1097

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/351 (11%), Positives = 104/351 (29%), Gaps = 49/351 (13%)

Query: 1   MLRR-------VLIGLGFLFSVVLVGAFTVPL-FIDWTDFREDFERQATLIVGKKIAVKG 52
           M++        V + +G  F + L+G   +    +           +    +   +  + 
Sbjct: 1   MMKWKKILLVVVSVLVGIFFILPLIGVGILKWAVLPPEKLTPLVVEKTNEFIEAHLECE- 59

Query: 53  GIKIHIL---PFPSVFFKDIRIDQKE-------------DGSFESKIEGLSMRAEFLPLL 96
            +++      P+  V   + R+   +                     +   +       L
Sbjct: 60  RVELTYFETYPYLGVKLTNGRLISHQAEDSIGHQEDLMIPSDSLLSFKKAIVVFNPTDYL 119

Query: 97  -SGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGG 147
            SG++ +  + +D      Y++ +G +NW   +S MD         +  + L+++H+  G
Sbjct: 120 FSGKVTIPRVIMDSIRFYGYVNEEGKANWEIYQSEMDSVDESSSSPLPKIDLQQVHITNG 179

Query: 148 RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207
                D++ D    +    L I        + L +++   S++          + A +  
Sbjct: 180 HFVYDDRQQDLYTAIDGFFLHIDGLLTQRGNKLDVETGSSSIVFRSPSYSLANKLALRFK 239

Query: 208 ANFPAKNKAISL---KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL--- 261
                 +    +     +L     P   D F      +        F +       L   
Sbjct: 240 GRLLLADGLRRIGLRDAELLVNNLPFTADGFMVPATEDNPSRIDMTFGLKVSDMNDLLHF 299

Query: 262 ---------NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
                    +  L+  +  L G+ +   G+  +    L   + + S     
Sbjct: 300 IPDEYFKDRDKTLAEGRIILEGDIRGELGDSIVPTVNLCCKIEDGSYHVKG 350


>gi|167847172|ref|ZP_02472680.1| hypothetical protein BpseB_17997 [Burkholderia pseudomallei B7210]
          Length = 877

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 83/305 (27%), Gaps = 35/305 (11%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSI---- 185
                 +  E I ++GG ++  D + D     L+ + + +    L     L   +     
Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAPELALTGIRIAVLNDGLVHRIALQAPANGTLF 224

Query: 186 KGSVIAEGTGNFDNKRSAFKIT--------ANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
            G +               K +        +  P     ++    +   AY   ID    
Sbjct: 225 HGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLARYANIRVTAYAGRIDNAIW 284

Query: 238 LFWNEKQPIYSGVFSVAGDFSKL----LNLELSAKKSRLSGNFKISDGN---VRISRYKL 290
             + +     +G   + G    L        L    +R   +  I       + +SR   
Sbjct: 285 AHFGDGHLYRAGG-ELRGYDVALRVRPTQPRLDIPVARFGWDVAIDPKRDYTLHLSRLHA 343

Query: 291 QSILP 295
           +   P
Sbjct: 344 ELGQP 348


>gi|224023843|ref|ZP_03642209.1| hypothetical protein BACCOPRO_00560 [Bacteroides coprophilus DSM
           18228]
 gi|224017065|gb|EEF75077.1| hypothetical protein BACCOPRO_00560 [Bacteroides coprophilus DSM
           18228]
          Length = 1000

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/415 (11%), Positives = 128/415 (30%), Gaps = 52/415 (12%)

Query: 1   MLRRVL-------IGLGFLFSVVLVGAFTVPLF-IDWTDFREDFERQATLIVGKKIAVKG 52
           M R++L       I +G L  V L        F    +       R A   +  ++ ++ 
Sbjct: 1   MNRKILKPIKISAIAVGALIVVFLAVVTIAVNFVFTPSRLTPVVLRVANQSMSARLDME- 59

Query: 53  GIKIHIL---PFPSVFFKDIRIDQK-------EDGSFESKIEGLSMRAEFLPLLS-GEIR 101
            +++      P   +   D  +  K       E        +   +    +  L   +I 
Sbjct: 60  SVELTFFSTFPRFGLKLTDGSLVSKAIRDTLWERTDSLVSFKKCVVVINPIDYLKDKKIS 119

Query: 102 VFDMYIDQPHLNFYLSSKGVSNW-----------FQRKSTMDMIHNVILEKIHVKGGRIK 150
           ++ + ++   +  + + +GV+NW                    I  + + ++  K   + 
Sbjct: 120 LYYLGLEDASVYAFKNKEGVANWDIVAADTTAVEDTAGQERPDISEININRVAFKRANVV 179

Query: 151 IIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF 210
             D+++     ++D +L + A      S L++D    ++I    G    +R A ++  N 
Sbjct: 180 FDDRDTRLYARVTDADLNLKASLRKGHSDLALDFKNRNIIFWQDGRLLLRRMATELKTNL 239

Query: 211 PAKNKAISLKI-QLFPLAYPIIIDLFGNLFWN--EKQPIYSGVFSVAGDFSKLLNLELS- 266
               +  +L +         + +D+ G +  +           + +     + +   +  
Sbjct: 240 DLNRQTRTLTLKDTRLSVNGVALDVDGTIRRDTVNHAAAVDLTYGLHAPSLETVLRMIPR 299

Query: 267 ----------AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN------KTKVSQD 310
                       + +++G  K   G  ++    L+  + ++S   +              
Sbjct: 300 SIMKDTKVAAKGEVKVAGTLKGLYGKQQMPEITLKVQVNDASAKYEGLPYGIDLLSADFA 359

Query: 311 EENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSH 365
               L   +  + +   +        +   +   +    D   + N K   D + 
Sbjct: 360 GFIDL-MKKKPSYADLKIFRFQGAHTDILADAKIEDLLGDPDITFNTKSSIDLTS 413


>gi|254244363|ref|ZP_04937685.1| hypothetical protein PA2G_05217 [Pseudomonas aeruginosa 2192]
 gi|126197741|gb|EAZ61804.1| hypothetical protein PA2G_05217 [Pseudomonas aeruginosa 2192]
          Length = 1088

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 97/335 (28%), Gaps = 38/335 (11%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M + +   +  L    LV      L I     R    +Q          ++   +I   P
Sbjct: 1   MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLR-VANQQLAQYATVPARLE---RIEFNP 56

Query: 61  F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           F   +    +R+ ++++   +     L    +   L   ++ + D+ ++ PH       K
Sbjct: 57  FSLELTLWGLRLGEEKN--PQLAFRRLYANLQLDSLWKRQLHLADVELEGPHTELLFDEK 114

Query: 120 GVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
           G  N                       + +++I +  G +   D    +     D +   
Sbjct: 115 GQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPV---DFSFDP 171

Query: 170 SARFLNIISPLSIDSIKGSVIA----EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
               L+ +S L  D  K +++A     G  +++   +   IT+      K I LK     
Sbjct: 172 LGFELHNLSTLPDDGAKMTLVATGPNGGRLDWEGDLTLVPITSRGHLSVKDIQLKAWWPY 231

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN---------- 275
           +     + L   +                    K          +   G           
Sbjct: 232 VRDNAPLVLENGVVSLSSDYRLDLSKDTRLLLDKAALKLADFSINSPQGKPLAKLASLDV 291

Query: 276 ----FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
                 ++   V +   + Q +   ++ ++D +  
Sbjct: 292 AATTLDLAKQEVVLGEVRSQGLEAWAAREKDGQLD 326


>gi|221639393|ref|YP_002525655.1| hypothetical protein RSKD131_1294 [Rhodobacter sphaeroides KD131]
 gi|221160174|gb|ACM01154.1| Hypothetical Protein RSKD131_1294 [Rhodobacter sphaeroides KD131]
          Length = 1070

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/335 (8%), Positives = 81/335 (24%), Gaps = 33/335 (9%)

Query: 5   VLIGLGFLFSVVLVGAFTVP--LFIDWTDFREDFERQATLIVG--KKIAVKG-GIKIHIL 59
           +L+ L  + +V                     + E +    +     +++ G  + +   
Sbjct: 1   MLLSLALVAAVAGFATLAFTGRPLPLPGWAVTEAETRINRALEPALSVSLGGLVLTVEPN 60

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             P +   D+R+ Q +       +    +  +    L G +    + +    ++    + 
Sbjct: 61  WIPRLRLDDVRLRQADG-RTLVTLPEARVVFDRGAALRGALHPKTITLSGARISLRRLAD 119

Query: 120 GVSNWFQRKST------------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYF 161
           G  ++   +                            L +I  +G  + + D+ + + + 
Sbjct: 120 GRFDFAMGEQGGTFRLASYAELRETVDRLFAQPVLADLRRIEAEGTTLTLDDRRAGRTWQ 179

Query: 162 LSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK- 220
             D  L +          + +  +     A          +     A   A    ++   
Sbjct: 180 AGDGRLTLVNGPDRRALEIGLTLLNSKGRAPAQALVTFVTTPGSPEARISATVDHVAAAD 239

Query: 221 --------IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
                     L  L   +       L    +               +           + 
Sbjct: 240 IAAQAAPVAWLEVLDAALSGRFSAALDGEGRLTRLEAGLDSGEGALQPRPETRPIAFDKA 299

Query: 273 SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
              F    G  R++  +L+    +          +
Sbjct: 300 GLAFAYDPGRERMNLTRLEVQGRSIRLSAQGHAYL 334


>gi|288942224|ref|YP_003444464.1| hypothetical protein Alvin_2522 [Allochromatium vinosum DSM 180]
 gi|288897596|gb|ADC63432.1| membrane protein-like protein [Allochromatium vinosum DSM 180]
          Length = 1203

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/204 (8%), Positives = 59/204 (28%), Gaps = 19/204 (9%)

Query: 29  WTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGSFESKIEGLS 87
              +R          +G ++++ G +++ +    P +  + + +   + G+    ++ L 
Sbjct: 29  PDSYRAPLAEWLAERLGYRVSIAG-LRLGLAGVRPRLNLEQVELSDPDTGAPALSLKALQ 87

Query: 88  MRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV-----ILEK 141
           +  +    +     ++  + +   HL    +++G                V        +
Sbjct: 88  LDLDLWDSVRTRSPQIEALTLVGAHLTVERTAEGRFRLQGLDGLGGGDPQVLEGFWREGR 147

Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201
           + V    I + D   +              R   +   L+    +  +            
Sbjct: 148 LDVVESEILLRDAVRESRLL----------RLTGVHLTLANTGEQHWLDLRAR-PVPPDP 196

Query: 202 SAFKITANFPAKNKAISLKIQLFP 225
            A +     P+    +   ++L  
Sbjct: 197 LATRARTPDPSDGGPVRPSLRLSA 220


>gi|153003051|ref|YP_001377376.1| hypothetical protein Anae109_0174 [Anaeromyxobacter sp. Fw109-5]
 gi|152026624|gb|ABS24392.1| protein of unknown function DUF490 [Anaeromyxobacter sp. Fw109-5]
          Length = 1505

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/347 (12%), Positives = 98/347 (28%), Gaps = 38/347 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQA----TLIVGKKIAVKGGIKIH 57
           LR    GL  L ++V V    V LF           R+        +  +  + G   + 
Sbjct: 8   LRVAGWGLLGLVALVGVLLSAVTLFATSKAGGPIVAREVIRLVDDALAGRFELAG---VA 64

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
           + P  +V  + +R+   ++      ++   +  +    L        + +D P +     
Sbjct: 65  VRPDGTVEVRGLRVFDPDEHL-VLAVDRARVAIDVTQ-LRRRTVGAAIALDGPSVLLEEE 122

Query: 118 SKGVSNW---------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
             G  +                  R         V +  + ++GG +  +D +       
Sbjct: 123 EDGGLSLVRAFSAAHPGPPRPEGPRTPPRGPGLEVRVSALAIRGGDVWWVDADGATRLEA 182

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLKI 221
            DL+L     +    + +        +   G  +       +  + A+         L  
Sbjct: 183 RDLDLDARGAWQRSAADVE-------LRLRGMLDLPVAAPLSLDVVASREGDRVRAPL-- 233

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGV-FSVAGDFSKLLNLELSAKKSRLSGNFKISD 280
            L        + L G+L         +     V    ++ +  EL   +   +  +  SD
Sbjct: 234 -LRASVGGTAVSLIGHLDVVTLAGRAAITRLDVDRAQARTVVPELGGGEDAAATVYAESD 292

Query: 281 GNVRISRYKLQ--SILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
           G +  +  +++     P      D    +  D    L F        
Sbjct: 293 GAIATAAARVEPRDGGPALGRRADAAVALRLDGARALGFDLALERLD 339


>gi|34541675|ref|NP_906154.1| hypothetical protein PG2094 [Porphyromonas gingivalis W83]
 gi|34397993|gb|AAQ67053.1| conserved domain protein [Porphyromonas gingivalis W83]
          Length = 1515

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/341 (12%), Positives = 89/341 (26%), Gaps = 23/341 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFR----EDFERQATLIVGKKIAVKGGIKIH 57
           +RR    +  + +V         L +     +       + + +  +G  + + G I I 
Sbjct: 31  MRRSKWIVVAVLTVAFCLLILPNLILQIPSVKRSVAGRVQTELSKALGTHVRI-GHISIG 89

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL- 116
                 +   DI I  +         E L+   + LPLL G +      + +  L+ Y  
Sbjct: 90  WWRQ--MEIDDIVIFDRA-RRPAVSAERLTGGLDLLPLLKGRLSFSSARLFKGELDVYRS 146

Query: 117 SSKGVSNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
                 N          +         + +  I ++  R+        Q   L  L+L  
Sbjct: 147 RPDTALNIQFLLDALKSKNPEEPSRLRLNINTILLRNCRLSASGLYKTQSDTLGLLDLNA 206

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
             R     S      ++     E     D K     ++           L I L      
Sbjct: 207 KVRLFQADSTGLKAQLRHLSFLEKNTGLDLKELHADVSLRGD-TLGVARLHISLPNSHIG 265

Query: 230 IIID---LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS---GNFKISDGNV 283
           ++     L           +      +     K L   L      L+       ++ G  
Sbjct: 266 MVSGYCVLSPENSALPAIRVTDLGGRIRPSDLKGLLPALDTMDDILNLSVPELTVASGEA 325

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
            +    +      +        ++ + E   +    +  + 
Sbjct: 326 VLPEISMNYGDELTLQAGIGLAEIGKKERMHVRLRLDELKL 366


>gi|167895754|ref|ZP_02483156.1| hypothetical protein Bpse7_18581 [Burkholderia pseudomallei 7894]
          Length = 863

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 68/222 (30%), Gaps = 15/222 (6%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 +  E I ++GG ++  D + D    L+   ++I+     I+  +++ +     +
Sbjct: 165 TFSTWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGIVHRIALQAPANGTL 223

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             G  +F  +     +       N      +   P+  P + 
Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265


>gi|37527913|ref|NP_931258.1| hypothetical protein plu4066 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787349|emb|CAE16438.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 1264

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 99/323 (30%), Gaps = 21/323 (6%)

Query: 2   LRRV---LIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56
           +RR+   L+    +  +++    +   FI     D+R     +   I+G  I   G I  
Sbjct: 1   MRRLPGVLLATAAIVIIIVALLVSGLRFILPHINDYRPQLFAKIESIIGVPID-AGYIAG 59

Query: 57  HILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
               F P    +DI +          K + +++  +    LL       D+   Q  +++
Sbjct: 60  EWESFGPVFELRDISVKTANAD---VKAKKITVALDIWLSLLRMRWNFRDLTFYQLQVDY 116

Query: 115 YLS--SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQ 168
           Y    +    N F +      +     +  +++  R   +    ++       L+ LN  
Sbjct: 117 YQPLFNDQNGNMFSQSDLFSDLFLEQFDHFNLQDSRFTFLTPSGERADLLLPQLTWLNKD 176

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTG-NFDNKRSAFKITANFPAKNKAISLK--IQLFP 225
              R    IS  SI++  G +  +    + +       I       +    L   +Q   
Sbjct: 177 NRHRAQGKISLSSINNQHGDIQVKFDLHDTNGVLDNGTIYLQADNVDVHPWLSHWLQDNT 236

Query: 226 LAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                   L   +   + +               K+ N   +   S L    +  DG   
Sbjct: 237 GLKDAEFSLSSWIMLKDGRIDGGQLQLRQGKANWKVANKSHNLSVSDLVLRMRRQDGGWL 296

Query: 285 ISRYKLQSILPNSSTDEDNKTKV 307
               +L +++ +       K  V
Sbjct: 297 FDAPELANLITDGQQWPSGKVSV 319


>gi|189499345|ref|YP_001958815.1| hypothetical protein Cphamn1_0367 [Chlorobium phaeobacteroides BS1]
 gi|189494786|gb|ACE03334.1| conserved hypothetical protein [Chlorobium phaeobacteroides BS1]
          Length = 1494

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/418 (10%), Positives = 123/418 (29%), Gaps = 64/418 (15%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDF----REDFERQATLIVGKKIAVKGGIKIHI 58
           + +L     + +++L+ A  V + ++        +             K+ ++   ++++
Sbjct: 6   KYILGIAVSISALILILAVIVAIILNSGSLDLMAKNRLIDFFNSEFQGKLNIE---EVNL 62

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG--EIRVFDMYIDQPHLNFYL 116
               ++     ++ ++   + E   E +++   FL LLS    I +  +  D   ++   
Sbjct: 63  QFPSTIILHQTQLYRENSETPEFTAEKVTLNLNFLRLLSNFSSITIRSLKADSFFIHLER 122

Query: 117 SSKGVSNWF--QRKSTMDMIHNVILEKI-----HVKGGRIKIID----QESDQVYFLSDL 165
              G +N                 LE+       +  G  + +D    +   ++  ++D+
Sbjct: 123 YPDGSTNIERIFAPRKEQDPDAPGLERFLCNRIDLTNGSAEYLDFQNKEADPELLTIADI 182

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
           +   +    +                 G       +   K   NF  +  +  L +    
Sbjct: 183 SFTGNKLRYS------------PENFSGIIRNIGFQLPQK---NFTLRKGSAKLSVTNKR 227

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
           L    +    G         +Y   F+V    +   +    A  +  +G+    + ++  
Sbjct: 228 LEILDLKAKTGKSSAELSLGLY--EFNVFSQENPDRHSSSPAMLNLKAGSIHTDELSIFF 285

Query: 286 SRYKLQSILPNSSTDEDNKTK------------------------VSQDEENLLNFSENG 321
               L   +  +S   + + +                        ++Q +        + 
Sbjct: 286 PDLALPPGIYTASGKAEGQLRKIDIRNAVIAHKNSLLRLQGELLNLNQPDFLGFRLETDS 345

Query: 322 AESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
           +    D  +T   +   K          D+  S   +          + E  SGD ++
Sbjct: 346 SRISGDFLQTAITDTTIKNLAEP---AGDLMISGYGQGNLKEFFTDLSIETESGDMLL 400


>gi|242241070|ref|YP_002989251.1| hypothetical protein Dd703_3672 [Dickeya dadantii Ech703]
 gi|242133127|gb|ACS87429.1| conserved hypothetical protein [Dickeya dadantii Ech703]
          Length = 1277

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/353 (11%), Positives = 97/353 (27%), Gaps = 36/353 (10%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L   G +  V++          +P       FR           G  + +   
Sbjct: 1   MRRLPGILAAAGAILIVLVALVVSGLRMALPTL---DYFRPQVVAWVQSATGLSVELD-R 56

Query: 54  IKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPH 111
           +      F P++  +++RI   +      + E +S+  +    L   + +  D+   +  
Sbjct: 57  LSGRWETFGPTLEIENLRIHHPDAD---WRSERISLALDVWQSLLHAQWKFRDLTFYRLQ 113

Query: 112 LNF--YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDL 165
            +    L  +  S    +   M  +     +   ++  ++       ++       L+ L
Sbjct: 114 FDLNTPLDLQRQSGRTWQPDRMGDLFLRQFDHFDLRDSQVTFQTPAGNRAVLSIPQLTWL 173

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN---KRSAFKITANFPAKNKAISLKIQ 222
           N +   R    IS  S +   G V        +          + A+       +S  ++
Sbjct: 174 NSKNRHRAEGQISLSSFNGQHGVVQVRMDLRDEQGWLNNGTVYLQADKIDMKPWLSRWVR 233

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGN------ 275
                      L   L   E        +        +          +R++ +      
Sbjct: 234 NNTGLESADFSLAAWLNVREGDIHGGDLLLQEGSASWRDGATPHRLDINRMTVHASRYQN 293

Query: 276 ---FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
                I   N+     +  +    +     +   +  D E  L    +  +  
Sbjct: 294 GWMLDIPALNMATDGARWPAGKLAALWLPADTQLLGPDREPELRIRGSQLDLE 346


>gi|119356184|ref|YP_910828.1| hypothetical protein Cpha266_0345 [Chlorobium phaeobacteroides DSM
           266]
 gi|119353533|gb|ABL64404.1| conserved hypothetical protein [Chlorobium phaeobacteroides DSM
           266]
          Length = 1512

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 53/406 (13%), Positives = 126/406 (31%), Gaps = 38/406 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGI---KIHIL 59
           ++V IG   L S  ++    V   +  + F + F +   + +  +    G +   K+ + 
Sbjct: 5   KKVFIGFLALLSAGVLLLSIVAAIVLNSGFLDRFAKDLAVKLFNE-EFYGHLELQKVKLN 63

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS---GEIRVFDMYIDQPHLNFYL 116
               V     RI + ++       + +++R  FL +L     ++    + +D   +N   
Sbjct: 64  FPNKVTILSPRIYEPDEDLPALSADKVTLRFNFLTILKPKIDKLSFRKIKVDSLLINVIE 123

Query: 117 SSKGVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV---YFLSDLNL 167
              G  N           ST   I +   + + ++   +       ++      + +++L
Sbjct: 124 RENGKRNIDLIFTSRKPDSTDAPIESFFSKVVTLRNSSLNYSRTLPNETPLALTVQNISL 183

Query: 168 QISA--------RFLNIISPLSIDSIKGSVIAE-GTGNF---DNKRSAFKITANFPAKNK 215
            +++         F   I  L++D  + S   + G+G F   + +     + A     N 
Sbjct: 184 DLNSLRLKIKKKEFGGTIEALALDIPQHSFRLKQGSGQFFVSEKRADIIALKATSDKSNA 243

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV-FSVAGDFSKLLNLELSAKKSRLSG 274
            +SL +  F +  P    L         +        ++      ++  +++  +   S 
Sbjct: 244 ELSLSLDKFNIFDPDQKKL-----LLAGKSFLDIQALNIHTRDLNMIYPDIALPEGVYSL 298

Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNK-TKVSQDEENLLNFSENGAESMHDLNETDF 333
                  +  I   K       S      K   V            + ++   D  +  F
Sbjct: 299 KGDARSQSNTIEIIKGVLAHNKSHLAVKGKLLNVQNKNAFGYQLEIDSSKIDPDFFQAFF 358

Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
               +K  K    +   I +               +    +G+  I
Sbjct: 359 ---SDKNQKELIARIGAISFIGKAHGNLKELSTDVHILTKAGNASI 401


>gi|327402312|ref|YP_004343150.1| hypothetical protein Fluta_0303 [Fluviicola taffensis DSM 16823]
 gi|327317820|gb|AEA42312.1| hypothetical protein Fluta_0303 [Fluviicola taffensis DSM 16823]
          Length = 892

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/357 (13%), Positives = 104/357 (29%), Gaps = 46/357 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-- 59
           L+   I    LF ++ +  +         D  +    +    +  K+ V   I +     
Sbjct: 11  LKWFFIIFSGLFLLITILLYAF-----KDDIIDYAVSEINKSLKAKVNVD-KIDVTFWAT 64

Query: 60  -PFPSVFFKDIRIDQK----EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            P  S+ F  + I                E + ++     + +    V  + I    L  
Sbjct: 65  FPDLSLDFNHVFIQDPFKNSTSKDTLLYTEQIRLKFSPADIWNENYHVKKIVIKPGTLQL 124

Query: 115 YLSSKGVSNWFQRKSTMD---MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
            +   G  N+   K +         + LE I   G R    ++ ++  Y     ++Q+  
Sbjct: 125 KIRKNGEENYDILKESDSKEKTTFKLTLESIKASGIRFSYSNKVNENSYKAKIQDIQLVG 184

Query: 172 RFLNIISPLSIDS---------------IKGSVIAEGTGNFDNKRSAFKITANF-PAKNK 215
            F      +S ++               I      + + + D  +  F+I          
Sbjct: 185 NFTQDQFDISTNADFYIQRIQNGLVPFVINQQASTQVSIHIDQVKELFEINNGKLLLAQI 244

Query: 216 AISLKIQLFPLAYPIIIDLF--------GNLFWNEKQPIYSGVFSVAGDF-SKLLNLELS 266
                +++   +  + ID            L + E + +     S  G F   + N    
Sbjct: 245 PFDFNLKVDSTSIKLNIDADKIPLAELANKLAFKEVETVSKLKGSGTGSFHLSMNNELKK 304

Query: 267 AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
               +++ NF I +G +          L  S+ D   +   S   +N    +     
Sbjct: 305 DSYPKVACNFSIDNGKLTEP----TKGLTLSNIDLKGEYS-SLKGKNKEELTIRNVS 356


>gi|172036071|ref|YP_001802572.1| hypothetical protein cce_1156 [Cyanothece sp. ATCC 51142]
 gi|171697525|gb|ACB50506.1| hypothetical protein cce_1156 [Cyanothece sp. ATCC 51142]
          Length = 1788

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/349 (11%), Positives = 97/349 (27%), Gaps = 25/349 (7%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64
           +   +  +   ++ G  +    +         E+Q +  + + + +             V
Sbjct: 30  IGWSVSVVLLGLIGGTISGGFLVQRN-LTPVVEKQLSTFLNRPVELGELEGFSFN---YV 85

Query: 65  FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124
            F    +           + GL +    L  +       ++   +P        +G    
Sbjct: 86  RFGQTDLLTTPTDPANVSMAGLKIAYNPLKYIIDGTLEIEVTAIEPSAYLEQGKEGNWLL 145

Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKII----DQESDQVYFLSDLNLQISARFLNIISPL 180
            Q  +       +  +++ ++ G+  II    D   D    L +++  I     N     
Sbjct: 146 TQFNTLNPNSP-IRFKQLGIEQGKAIIISRSKDGIKDPSINLENISGIIQPINNNSEIKF 204

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII---DLFGN 237
            + S   +    G  +     +      N   +   ++ +I    L  PI +    +  N
Sbjct: 205 QVKSHIVN---SGNFHISGIFNEENRATNLLVRGHQLNAEIISQVLPLPIELQSGKIDAN 261

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297
           L         S +  VA        ++   +  +  G  +     +       Q      
Sbjct: 262 LEVAHANNQLSNLQGVARLNQVDTRVKGLPQLLKTHGQLQFKGKKINFDEVITQFG---- 317

Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346
             +     K   D E   N       +       D F+  +++ KN  +
Sbjct: 318 --EVTGVVKGDIDLEKGFNLGVKTQVTSI----QDIFKTIKQQPKNLSV 360


>gi|301383150|ref|ZP_07231568.1| hypothetical protein PsyrptM_10962 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302063738|ref|ZP_07255279.1| hypothetical protein PsyrptK_27459 [Pseudomonas syringae pv. tomato
           K40]
 gi|302133788|ref|ZP_07259778.1| hypothetical protein PsyrptN_20459 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
          Length = 987

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/331 (10%), Positives = 90/331 (27%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + L         V+V    +  FI          +Q          ++   ++   P+
Sbjct: 1   MSKGLKRTLGSLLAVIVLYSLLGFFILPGVALRIANQQLANYSTVPARLE---RLEFNPY 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 58  TLELTLWGLNIGTP--GKEQVAFEKLYANLQIDSLWTKALHLQRVELIKPKAELLFDKQG 115

Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168
             N             +         + + +I +  G +   D    +        LN +
Sbjct: 116 KLNLAQLFRLPASEPAKDQPPSKPFPLRIGEIKLADGYVHFQDVRPSEPIEFLYDALNFE 175

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           +            +  +      G +   G  +     S   +           P    A
Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLVPITSEGTLKVTDGKMKLWWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L  +     K    S   +     +      +  +   +S  +
Sbjct: 236 LPLALENGVLNFSTAYKLDLSKETELKLTNLSASVAPFALNTPDGRPLVRLQHLDVSETS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + Q +   ++ + D +  
Sbjct: 296 VDLARQLVSVGKIRSQKLETWAAREADGQLD 326


>gi|42520822|ref|NP_966737.1| hypothetical protein WD1011 [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410562|gb|AAS14671.1| conserved hypothetical protein [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 847

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 55/393 (13%), Positives = 121/393 (30%), Gaps = 55/393 (13%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--- 78
               F DW+ +R+   ++       K+ + G IK+ ++  P +   ++ +   E+     
Sbjct: 20  VAATFKDWSGYRKYIIKELEKTYDAKVHIGGKIKVSLI-TPKLTIYNVYVQYNENKEQKL 78

Query: 79  -FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV 137
                +  + +R  FL L    ++   + +     N         N     +T    + V
Sbjct: 79  SDLISVRKIEIRPSFLSLFLFSLQPKSITLFGMKSN-------KENLLNIINTNASGNTV 131

Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197
            +    +K  ++   +  +D       +N++  A   N      +     +    G  N 
Sbjct: 132 DI---VIKDSQVSFKNDFADI------VNIKEVAVKKNKQFFGKVKVGDNNYDFSGKVNI 182

Query: 198 DNKRSAFK---------ITANFPAKNKAISLKIQLFPLAYPII-IDLFGNLFW-----NE 242
             +               T N   +    +L + +   +  +  +    NL +       
Sbjct: 183 TKRNVHISVESNFVNLLFTGNRNQEELQGNLTLTINNSSGSVSDLAKIINLSFLSCVIPS 242

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS------DGNVRISRYKLQSILPN 296
           +    S   S+        +L++ +K  + SG  +        + N+  S+  L SI  +
Sbjct: 243 ENIKISSNISLNESEFTATDLKIDSKSMQASGTIQNDRKGNHTNFNISFSKVDLDSIQND 302

Query: 297 SSTDEDNK-------TKVSQDEENLLNFSENG---AESMHDLNETDFFEEEEKKNKNDDL 346
           S    + K         V ++     N   +       + D         + K   N  L
Sbjct: 303 SQRTMNMKDLLECFRAVVPKNLSLNFNMEASNIQYQNKILDNFRAVLKSTDGKVKVNTLL 362

Query: 347 KKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
           K   I    N         +      F+GD ++
Sbjct: 363 KFPGI---NNISYLSGEISNNNVLSEFNGDLLV 392


>gi|58698633|ref|ZP_00373528.1| conserved hypothetical protein [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225630674|ref|YP_002727465.1| hypothetical protein WRi_009630 [Wolbachia sp. wRi]
 gi|58534855|gb|EAL58959.1| conserved hypothetical protein [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225592655|gb|ACN95674.1| hypothetical protein WRi_009630 [Wolbachia sp. wRi]
          Length = 847

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 51/393 (12%), Positives = 117/393 (29%), Gaps = 55/393 (13%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--- 78
               F DW+ +R+   ++       K+ + G +++ ++  P +   ++ +   E+     
Sbjct: 20  VAATFKDWSGYRQYIIKELEKTYDAKVHIGGKVEVSLI-TPKLTIYNVYVQYNENKEQKL 78

Query: 79  -FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV 137
                +  + +R  FL L    ++   + +     N         N     +T    + V
Sbjct: 79  SDLISVRKIEIRPSFLSLFLFSLQPKSITLFGMKSN-------KENLINIINTKASGNTV 131

Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197
            +    +K  ++      +D       +N++  A   N      +     +    G  + 
Sbjct: 132 DI---VIKDSQVSFKSDFADI------VNIKEVAVKKNRQFSGKVKVGDNNYDFSGKVDI 182

Query: 198 DNKRSAFK---------ITANFPAKNKAISLKIQLFPLAYPIIIDLFG------NLFWNE 242
             K               T N   +    +L + +   +  +            +     
Sbjct: 183 TKKNVHISVESNFVNLLFTGNRNQEELQGNLTLTINNSSGSVSDLAKIINLSFLSHVIPS 242

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS------DGNVRISRYKLQSILPN 296
           +    S   S+        +L++ +K  + SG  +        + N+  S+  L SI  +
Sbjct: 243 ENIKISSNISLNESEFTATDLKIDSKSMQASGTIQNDRKGNHTNFNISFSKVDLDSIQND 302

Query: 297 SSTDEDNK-------TKVSQDEENLLNFSENG---AESMHDLNETDFFEEEEKKNKNDDL 346
           S    + K         V ++     N   +       + D         + K   N  L
Sbjct: 303 SQRTMNMKDLLECFRAVVPKNLSLNFNMEASNIQYQNKILDNFRAVLKSTDGKVKVNTLL 362

Query: 347 KKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
           K   I    N         +      F+GD ++
Sbjct: 363 KFPGI---NNISYLSGEISNNNVLSEFNGDLLV 392


>gi|260767288|ref|ZP_05876228.1| possible exported protein [Vibrio furnissii CIP 102972]
 gi|260617695|gb|EEX42874.1| possible exported protein [Vibrio furnissii CIP 102972]
          Length = 1293

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/347 (10%), Positives = 114/347 (32%), Gaps = 33/347 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R VL  L     ++ +    + + +     F+++ +   +     +  +           
Sbjct: 10  RIVLWLLVSCLVLLAIAITALRVLLPEMNRFKDEIQDWVSEQSHIQFVITDVRGFWRNTH 69

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL---- 116
           PS+  + ++ +  +    +     + +  + +  +L  +  + ++ I Q  L+       
Sbjct: 70  PSLALQGVQANLPDGSQIQFDTGRIDVEFDLVQSVLQRQPVIANLIIHQLKLDIRSIDWT 129

Query: 117 ---SSKGVSNWFQRKSTM----DMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168
               + G S+    +  +    D +    L+   V+   I       D +   +  L+ +
Sbjct: 130 RLNQTDGQSSQANTQGKILRRLDDLFLRQLDDFTVQDSTILYQTLAGDMRQLNIEKLHWK 189

Query: 169 IS-----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
                  A     I+   I+S++ S   E  G+  +    F ++A+       ++  +  
Sbjct: 190 NQGARHFADGEISIADTEINSLQVSANFEDHGSLQDISGNFYLSADKLRVRPWLTRYLTD 249

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN-----LELSAKKSRLSGNFKI 278
                  ++     +     QP+  G   +        +     L L +   +LS     
Sbjct: 250 ETGIERGVVSFNAWMTLKNSQPV-DGYVELKPSELAWQSDERHELLLESGIVQLSP---- 304

Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL-LNFSENGAES 324
           ++   +++ + L+    ++      +  V+ D +      + +  + 
Sbjct: 305 TEKGWQVNAHSLKLRTDDTPWP---EVDVALDWQPEQWRLNVSQLDI 348


>gi|88802988|ref|ZP_01118515.1| outer membrane assembly protein [Polaribacter irgensii 23-P]
 gi|88781846|gb|EAR13024.1| outer membrane assembly protein [Polaribacter irgensii 23-P]
          Length = 861

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/359 (10%), Positives = 94/359 (26%), Gaps = 30/359 (8%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI---LPFPSVFFKDIRIDQKE 75
               +PL                  +   ++ K  + +      P+ S+   ++ I  K 
Sbjct: 29  AMSAIPLLF-KDKILALVSDTINNKINATVSFK-ELDLSFFRNFPYASLRVNELAIINKA 86

Query: 76  DG--SFESKIEGLSMRAEFLPLL---SGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
                     E ++   +   L    +  I +  +      LN        +N+   K  
Sbjct: 87  PFLRDTLFHAEKINFTIKITSLFYYKTAPIAIDRISATNGTLNIIFDKNNSANFDIAKKN 146

Query: 131 MD------MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
                       +++ +  ++       D+ S     L+++       F   I  +   +
Sbjct: 147 NSVTTETESAVALLINEYALENINFSFSDETSKVKLALNNIYHSGKGNFTKEILDIDTKT 206

Query: 185 IKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243
               S+  +      +         N   +N   + K +       + ++  G +   E+
Sbjct: 207 TAKLSLDYQNINYLKDINIKLNAALNIDLQNSKFTFK-ENTASINKLPLEFNGFIQLTEE 265

Query: 244 QPIYSGVFSVAGDFSKLLNLEL----SAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
              Y   F       K L   L    S   + +          V    +   +I   + +
Sbjct: 266 GQFYDMAFYTPNSSFKNLLALLPKQYSKDLNGIETKGNFDLNGVVKGSFTETTIPALNIS 325

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHD---LNETDFFEEEEKKNKNDDLKKDDIQYSV 355
                               +      D   +N + + ++ +    N   K D   +S 
Sbjct: 326 FVSKNAMFKYTSLPK-----SVNNINIDASIINTSGYLKDTKIAITNTSFKLDKDLFSA 379


>gi|237807016|ref|YP_002891456.1| AsmA family protein [Tolumonas auensis DSM 9187]
 gi|237499277|gb|ACQ91870.1| AsmA family protein [Tolumonas auensis DSM 9187]
          Length = 679

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/303 (7%), Positives = 83/303 (27%), Gaps = 24/303 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R      +    ++   +     +     +  F        G  + + G +  + L  
Sbjct: 5   MHRAFRWFLYTILALVAAIWLTLGLLKPEHLKGPFVAWVQQQTGLPLEI-GKLNYNPLYP 63

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             V  +++ +        + KI  + +          ++ +  + I  P +         
Sbjct: 64  NIVLAENVTLG------PDIKIGKIYLEIAGGSWWQRQLHIAHLDIINPQIT-------- 109

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE-SDQVYFLSD---LNLQISARFLNII 177
             W    +    +  + ++ + +   +    +         L++   +   +      + 
Sbjct: 110 --WRPGLTLPQPLRQLQVDDLTIDKLQFSWPNGSLEGGSLHLTNWQPIRNGVVIPLTEVN 167

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN---KAISLKIQLFPLAYPIIIDL 234
                D ++ + ++ G    +   +A K++ +    +     ++ ++        I    
Sbjct: 168 FDARADRLQYASLSLGKTRIEGTLTAEKLSVSDLQSDLFHGGMAAELTWDLKNNRIDFQQ 227

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                W      +  +               +     LS  F ++     + + + Q   
Sbjct: 228 LALANWQLDLQTFPALPLALPQIFADQVTLENVSAIDLSKRFALNQATGTLEKLQWQPGQ 287

Query: 295 PNS 297
             +
Sbjct: 288 LPA 290


>gi|116624922|ref|YP_827078.1| hypothetical protein Acid_5848 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228084|gb|ABJ86793.1| hypothetical protein Acid_5848 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 776

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 97/313 (30%), Gaps = 26/313 (8%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE--DGSFESKIE 84
                +    +      +G+K+ + G +  ++   P      + I +         + IE
Sbjct: 29  FTADQYGRRLQISLERALGRKVEI-GKVHFNLFKGPGFSVDKVIIYEDPAIGMEPVAYIE 87

Query: 85  G---LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK----GVSNWFQRKSTMDMIHNV 137
               + +      LL G   +  + +D+  +N   S      G  N+      ++     
Sbjct: 88  EPGSMEVVPSIWSLLGGRFVISSIRLDEASINLTKSGPASEWGRWNFASF---INPSVIR 144

Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK----------G 187
            +  IHV+ GRI     ++  V++L++ +L IS   ++    +   +            G
Sbjct: 145 TVPAIHVRNGRIHFKFGDTKNVFYLTETDLDISPAGVSGDWKIECSAKPARTDRPAQGLG 204

Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
           S   +G            +  +  A  +  +L        +   +    +L         
Sbjct: 205 SFTLKGRWYAALNTVELDMRVDHAALGEVTALLNGQDMGVHGT-LSSRLHLAGPLNNVGI 263

Query: 248 SGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
           +G   + GD  +   +  +++   L+ + ++     +   +   +           +   
Sbjct: 264 TGRLDI-GDVHRWDMMPGNSQGWPLNISGRLDLIGQQFELHSSTAGNATLPLAVHFRAT- 321

Query: 308 SQDEENLLNFSEN 320
               +     + N
Sbjct: 322 DYLSQPHWALAVN 334


>gi|315181287|gb|ADT88201.1| hypothetical protein vfu_A03096 [Vibrio furnissii NCTC 11218]
          Length = 1293

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/347 (10%), Positives = 114/347 (32%), Gaps = 33/347 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R VL  L     ++ +    + + +     F+++ +   +     +  +           
Sbjct: 10  RIVLWLLVSCLVLLAIAITALRVLLPEMNRFKDEIQDWVSEQSHIQFVITDVRGFWRNTH 69

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL---- 116
           PS+  + ++ +  +    +     + +  + +  +L  +  + ++ I Q  L+       
Sbjct: 70  PSLALQGVQANLPDGSQIQFDTGRIDVEFDLVQSVLQRQPVIANLIIHQLKLDIRSIDWT 129

Query: 117 ---SSKGVSNWFQRKSTM----DMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168
               + G S+    +  +    D +    L+   V+   I       D +   +  L+ +
Sbjct: 130 RLNQTDGQSSQANTQGKILRRLDDLFLRQLDDFTVQDSTILYQTLAGDMRQLNIEKLHWK 189

Query: 169 IS-----ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
                  A     I+   I+S++ S   E  G+  +    F ++A+       ++  +  
Sbjct: 190 NQGARHFADGEISIADTEINSLQVSANFEDHGSLQDISGNFYLSADKLRVRPWLTRYLTD 249

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN-----LELSAKKSRLSGNFKI 278
                  ++     +     QP+  G   +        +     L L +   +LS     
Sbjct: 250 ETGIERGVVSFNAWMTLKNSQPV-DGYVELKPSELAWQSDERHELLLESGIVQLSP---- 304

Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL-LNFSENGAES 324
           ++   +++ + L+    ++      +  V+ D +      + +  + 
Sbjct: 305 TEKGWQVNAHSLKLRTDDTPWP---EVDVALDWQPEQWRLNVSQLDI 348


>gi|264679373|ref|YP_003279280.1| AsmA [Comamonas testosteroni CNB-2]
 gi|262209886|gb|ACY33984.1| AsmA [Comamonas testosteroni CNB-2]
          Length = 1298

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/393 (11%), Positives = 114/393 (29%), Gaps = 54/393 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LRR++  +  L  + L+    VP        +   E++A   +G+ + V    KI   P+
Sbjct: 10  LRRLIWSVLALLLLWLLLWAVVPWV-----AKSQLEKRAAEKLGRGVHVG---KIEFAPW 61

Query: 62  -PSVFFKDIRI----------DQKED----------GSFESKIEGLSMRAEFLPLLSGEI 100
             S+   ++ I             E              + +I+ + + A    L     
Sbjct: 62  AMSITLHELVIDKAIKKVAETADPEGSAAQKDLKSAAEPQLQIKRIFINASAQSLFRLAP 121

Query: 101 RVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKII 152
            +  + +D P +     S G  +                    +  L  I ++ GRI++ 
Sbjct: 122 VLDAIEVDAPVVRLTQHSLGKLDIDDVIARLSEPDDKEPSKPLSFALYNIALRDGRIELN 181

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212
           D+   + + L DL L I                +  V+     + +  +      +    
Sbjct: 182 DEFVQRKHELKDLQLSIP------FISNLASKREIKVLPHLAFDLNGSKFDTSGESTPFT 235

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
             +  +++++   +     +   G +  +      SGV        ++   +       +
Sbjct: 236 DTRQTAMQLKWEHIDLAPYL---GYVPASVPVQPLSGVLDT---DLQISFEQKDQPVVSI 289

Query: 273 SGNFKISD----GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN-GAESMHD 327
           SG   +S+               ++       +  + +++ +    +    +    +   
Sbjct: 290 SGKLALSNVAVQDRQSAPLLNFDALEVQLKNVQPLQNQIALESVRWVKPEVHASRNAQGV 349

Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEE 360
           +N               +    +   +      
Sbjct: 350 INWLGLNAPAGAPAAPLEKAVPEPASAEASTPA 382



 Score = 47.6 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/288 (9%), Positives = 83/288 (28%), Gaps = 49/288 (17%)

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
           +   ++ +  ++        + L ++ + +  L  +I +  +   +P ++   +++GV N
Sbjct: 293 LALSNVAVQDRQSA-PLLNFDALEVQLKNVQPLQNQIALESVRWVKPEVHASRNAQGVIN 351

Query: 124 W--------------------------------FQRKSTMDMIHNVILEKIHVKGGRIKI 151
           W                                  +         V +++  ++GG +  
Sbjct: 352 WLGLNAPAGAPAAPLEKAVPEPASAEASTPAQADAKAEKPGKPLVVGVQQFDIEGGIVHW 411

Query: 152 ID----------QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201
            D            +  V    +L   ++A      +     + +  V        D + 
Sbjct: 412 QDAATGAAPAALTLAPLVLQAKNLAWPMNAPLQLTATAGLQTAEQARVEGAARLAVDGEA 471

Query: 202 SAFKITANFPAKNKAI----SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGD 256
           +      N   +   +          F      +++    + W E   +      +    
Sbjct: 472 TDKAGNLNLKLEQMPLQWVQPYMQAHFKPQLSAMLNTDARISWGEGGVVAEVAELTADKL 531

Query: 257 FSKLLNLELSAKKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDN 303
             +     ++ ++ ++SG    ++   V++    +Q     +  D   
Sbjct: 532 QLQDKQAPVNIEQIKVSGVQVDLAARQVQVEAIAVQKPQLAALRDAQG 579


>gi|104783684|ref|YP_610182.1| hypothetical protein PSEEN4740 [Pseudomonas entomophila L48]
 gi|95112671|emb|CAK17399.1| conserved hypothetical protein; putative signal peptide
           [Pseudomonas entomophila L48]
          Length = 978

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/331 (9%), Positives = 93/331 (28%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + L         ++     +   I          +Q          ++   +I + PF
Sbjct: 1   MPKGLTRAVGALLALVALYSLLGFLILPGIALRVANQQLAQYATLPAHLQ---RIELNPF 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    ++I +   G  +   E L        L +  + +  + +D+P      +  G
Sbjct: 58  SLELTLWGLQIGEP--GKEQVGFERLYANLSLDSLWTKALHLEAVALDKPRTELLFAKDG 115

Query: 121 VSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166
             N            +          + +  I +  G +   D    +         +L 
Sbjct: 116 SLNLTQLFKLPPSEAKPDEPPSDPFPLRIGSIKLSEGYLHFQDLRPSEPIEFLYDSMNLE 175

Query: 167 LQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           L+  +   +  + +++ +     G +   GT +     S   +           P    A
Sbjct: 176 LKNLSTLPDDNADMTLVANGPAGGRIDWSGTLSLAPIASEGTLKVTEGKMKAFWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   ++      L  +          S   +     +             +S  +
Sbjct: 236 VPLVLEDGVVSLDTHYKLNLSKETELLLDNTSVRVAPFAIKAPDGRPLARLASLEVSETS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + + +   ++ + D +  
Sbjct: 296 IDLAKQLVTVGKIRSEKLETWAALESDGQLD 326


>gi|241764379|ref|ZP_04762405.1| conserved hypothetical protein [Acidovorax delafieldii 2AN]
 gi|241366222|gb|EER60786.1| conserved hypothetical protein [Acidovorax delafieldii 2AN]
          Length = 1383

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/267 (9%), Positives = 67/267 (25%), Gaps = 26/267 (9%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAE 91
           FR   E QA   +G  + +           PS     + +   +      ++  + +   
Sbjct: 51  FRPQLEAQAARALGVPVRIGSITARSEGLIPSFELLGVALLDAQG-RPALQLPRVVVAPS 109

Query: 92  FLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF-------QRKSTMDMIHNVILEKIHV 144
              LL        +YI+ P L+    + G               +           ++ +
Sbjct: 110 PRSLL--HWGFEQLYIEHPDLDIRRQADGRIVVAGLTFSESAGNNNAAADWLFSQGEVVI 167

Query: 145 KGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSI---DSIKGSVIAEGTGN---- 196
           +GG ++  D++       L ++++ +          ++     +        G       
Sbjct: 168 RGGTLRWTDEQRGAPELALENVDVLLRNGSWQHNMRIAATPPSAWGDRFTLTGRFRAPLL 227

Query: 197 --FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG----- 249
              D     +            +S +++        +    G L                
Sbjct: 228 RANDGNWQHWSGQLFADFTRVDVS-RLRHHADVGVEVAQGRGALRAWADVQRGQIVGGTA 286

Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNF 276
             ++    + L           + G  
Sbjct: 287 DLALTDVNATLGPQLQPLTLPSIEGRL 313


>gi|218265014|ref|ZP_03478638.1| hypothetical protein PRABACTJOHN_04348 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221682|gb|EEC94332.1| hypothetical protein PRABACTJOHN_04348 [Parabacteroides johnsonii
           DSM 18315]
          Length = 1542

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/379 (10%), Positives = 107/379 (28%), Gaps = 43/379 (11%)

Query: 2   LRRVLIGLGF--LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           ++R+ I      +  +++     +P F             A+   G  I + G I++   
Sbjct: 5   MKRIGIICLIPMVLVILISILLYIPPF--QNFAVRLATEYASETTGMNIRI-GQIRLSF- 60

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
              ++  +D+++    D      +E   +    LPLL  E+ V  + +     N     +
Sbjct: 61  -PLNLTVRDVKVITPPD--TLLSLESFQVNIRPLPLLKKEVLVDAIDLRGMKANTGNLIE 117

Query: 120 GVSN-------WFQRKSTMDMIHNVILEKIHVKGGRIKII-----------DQESDQVYF 161
           G+         + +            L KI +    I ++                    
Sbjct: 118 GMEIKGTLGKLYAKADRIDLGKEIARLNKIDLSDTAITLLINDTTTNKDTTSTTVGWKLK 177

Query: 162 LSDLNL-------QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214
           L  ++L       Q+    L + + +    +   ++  G+  +   R     ++     +
Sbjct: 178 LDQIDLNRVAFAMQMPDDSLRLSTYIDKAGLTDGMVDLGSARYSASRFLLSGSSLSYDGS 237

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274
            +        P    +      ++       +Y G            N       S L+G
Sbjct: 238 YSEP-TPGFDPSHIALN-----DVNIQIDSLLYGGRDISVRIKEFSANDRSGLTLSSLTG 291

Query: 275 NFKISDGNVRISRYKLQSILPNSSTDED---NKTKVSQDEENLLNFSENGAESMHDLNET 331
           +       +++    L++             N    +         + +  +    +   
Sbjct: 292 DISSDSTTIQVPELLLKTPYSEIRLLATVPWNSFDDTPSSTLRSLLTASVGKEDVFIFAG 351

Query: 332 DFFEEEEKKNKNDDLKKDD 350
              +E ++     +++   
Sbjct: 352 PLPKEFKQAYPQKEIRLTA 370


>gi|198277151|ref|ZP_03209682.1| hypothetical protein BACPLE_03359 [Bacteroides plebeius DSM 17135]
 gi|198269649|gb|EDY93919.1| hypothetical protein BACPLE_03359 [Bacteroides plebeius DSM 17135]
          Length = 998

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/286 (13%), Positives = 94/286 (32%), Gaps = 29/286 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLF-IDWTDFREDFERQATLIVGKKIAVKGGIKIHIL- 59
           +R   I LG L +V L+    V  F              A   +  ++ +K  +++    
Sbjct: 9   IRLTAISLGALLTVFLLAVTIVVNFIFTPEKLTPVVLNVANQSLNARLQMK-SVELTFFS 67

Query: 60  --PFPSVFFKDIRIDQKE-------DGSFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQ 109
             P   +   D  +  K                +   +    +  L  + I +  + ++ 
Sbjct: 68  TFPRFGLKVTDGVLVSKAINDTLWQKTDSLVSFKKCVVVVNPVDYLLHDKISLRYLGLED 127

Query: 110 PHLNFYLSSKGVSNWFQRKS-----------TMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
             +  + + +G SNW   KS               I  + + ++ +K   +   D+++  
Sbjct: 128 ASVYAFKNKEGKSNWDIVKSTEETVEEDTTSQKPQIQEIDINRVALKRTNVTFDDRDTRV 187

Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIA--EGTGNFDNKRSAFKITANFPAKNKA 216
              + +LN+ + A      S L+++    +++   +G    ++              ++ 
Sbjct: 188 YARVQNLNMNLKASLKKDYSMLALEYDNENLLFWQDGQLLVNHLAVGLNADMQLDRVSRR 247

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNE--KQPIYSGVFSVAGDFSKL 260
           ++LK         I +DL G L  +      +    + +     + 
Sbjct: 248 LTLK-DTGLTLNGIALDLSGTLGRDTIGGPTLVDLTYKLHAPSLET 292


>gi|297539141|ref|YP_003674910.1| hypothetical protein M301_1961 [Methylotenera sp. 301]
 gi|297258488|gb|ADI30333.1| protein of unknown function DUF748 [Methylotenera sp. 301]
          Length = 1211

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 47/351 (13%), Positives = 108/351 (30%), Gaps = 40/351 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKI-AVKGGIKIHILP- 60
           ++VL  L  L + +  G F       +       ++    I  KK+ ++    K+   P 
Sbjct: 7   QKVLQFLVTLPAKIFAGLFIFYCLFGYFAVNPLAKKLVPWIAEKKLASIGSVGKVTFDPL 66

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
                 ++ ++ +K      +    L +  E   +     +  ++ +  P     +S +G
Sbjct: 67  RLKATVENFKLTEKSGA-PLAGFAKLVVDFEASGIFKRAWKFKEISLVDPQALIAISPQG 125

Query: 121 VSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF--LSDLNLQ-- 168
             NW          +    D I  +I++++ VK G I  +D          ++ L+ +  
Sbjct: 126 KLNWADLIAKLNEDKTPPDDTIPRLIIQQLSVKLGNIDYVDASRATPLKAAITPLDFELG 185

Query: 169 ----ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR----SAFKITANFPAKNKAISLK 220
               +     N +   +     G++  +G    +        A          N A  + 
Sbjct: 186 QFSTLPQDRGNYLIAANFPEQGGTLKWKGNIGVNPVASKGFVALDGVKIAKLMNIAKGVY 245

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIY---SGVFSVAGDFSKLLNLELSAKKSRLSG--- 274
           + L             N      +P     +   ++        N ++S K++ L+    
Sbjct: 246 LPLTVSQGDAQTSFEYNFSLPNNKPKLVLNNVALNLNSVVGDAPNAKVSLKQANLTIPRL 305

Query: 275 --------NFKISDGNVRISRYKLQSIL---PNSSTDEDNKTKVSQDEENL 314
                     +  D N++ S +++ S             N   +     N 
Sbjct: 306 DFVMNNAPQLQFQDLNMKFSGFEINSGSQSLLVLPQVAVNHVSMDLAARNA 356


>gi|158423866|ref|YP_001525158.1| putative assembly of outer membrane protein [Azorhizobium
           caulinodans ORS 571]
 gi|158330755|dbj|BAF88240.1| putative assembly of outer membrane protein [Azorhizobium
           caulinodans ORS 571]
          Length = 724

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/290 (9%), Positives = 72/290 (24%), Gaps = 30/290 (10%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGL 86
           +   + R           G+ + ++G  +  ++P+P +  + + +     G+   + E +
Sbjct: 128 VPQGEVRRAATEALAASSGRDVRIEGESRFSLVPYPRIVLQRVTLAMP--GTSALESEQV 185

Query: 87  SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG 146
             R   LPLL G   V  + + +P L    + +                      + ++ 
Sbjct: 186 VARLRLLPLLLGRADVSSVTLRRPILTMSGAVEVPHLSLAPFVRTPTAP-----SLRIED 240

Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKI 206
           G I   D        +S ++ ++           S D         G             
Sbjct: 241 GTIAWRDSGGLTQELVSGISARLDHSSGGKGLSASADFTWRDKTTSGRLTVA------DA 294

Query: 207 TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS 266
           +A     +    L +                +      P   G  ++     + +   + 
Sbjct: 295 SAFLDGMDSDTRLDLFSDGATLKFR-----GVAAAGANPAAEGDIALDSPDLRSVLNWVG 349

Query: 267 AKKS--------RLSGNFKISDGNVRIS----RYKLQSILPNSSTDEDNK 304
                                   + ++               +   D +
Sbjct: 350 TTPPTSGGFGRFSFGARLSAHGREISLTPAYVEMDGNRGEGGLTLKLDGR 399


>gi|94265027|ref|ZP_01288796.1| hypothetical protein MldDRAFT_0043 [delta proteobacterium MLMS-1]
 gi|93454516|gb|EAT04801.1| hypothetical protein MldDRAFT_0043 [delta proteobacterium MLMS-1]
          Length = 597

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 81/281 (28%), Gaps = 42/281 (14%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV-FFKD----IRI 71
           L+ A   P                +  + + + +    +    P   V    +     R+
Sbjct: 117 LLTALLAPRL---------LADYFSRQLERPVTIA---RADWQPVNRVLTLHNGIVGPRL 164

Query: 72  DQKEDG-SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
           D  +D          L  R     L  G      + ++QP ++ +    G  N       
Sbjct: 165 DNPDDRIDPLLSFRTLQARIRPGNLWHGGPLFKTLRLEQPFIHLHRDRTGRYNLAPDLFL 224

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESD----QVYFLSDLNLQISARFLNIISPLSIDSIK 186
           +        + + ++ GR+   D            + ++N Q+                +
Sbjct: 225 LGGRLP---DPVEIRDGRLFYSDHRGGDDRRYQVEIREINGQLQPIASRG------SGSR 275

Query: 187 GSVIAEGTG-NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
            ++   G G      +   ++TA     +  + L      + +  + +L   L       
Sbjct: 276 VALELGGIGPEAAGVKLRGELTAGRSGADDQLQL-----VVNHWPLAELAPYLQPLLGHT 330

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
           I +G+  +   F+     EL   K       ++++  +   
Sbjct: 331 IAAGLLDMQASFTPGPGTELHVSK-----QLQLTNLRLTSP 366


>gi|86130743|ref|ZP_01049342.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
 gi|85818154|gb|EAQ39314.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
          Length = 893

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 53/381 (13%), Positives = 119/381 (31%), Gaps = 36/381 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI 58
           ++++   +G +  V+++     P       FR   E      +   +  +     + + +
Sbjct: 1   MKKIFKIIGIVVLVLVIVLAASPFL-----FRGKLEDLLKETINNNLNAQVEWSSLDLSL 55

Query: 59  ---LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSG----EIRVFDMYIDQ 109
               P  +V   D ++       G   +  + + +      L        I +  + + +
Sbjct: 56  FRSFPDATVIVNDFKVVNNAPFAGDTLASGKEIRIEMGVTQLFKNTADEPIAIDALSLLE 115

Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHN---------VILEKIHVKGGRIKIIDQESDQVY 160
            +++  + S G +N+   K T                 L++  +   +I   D+ +    
Sbjct: 116 ANVHVQVDSLGNANYDIVKETPTTETTTEESSEPFVFNLQEYSLIDSKIIYDDRSTQTHL 175

Query: 161 FLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
            L+++N   S  F  I S L   +    S    GT   D      +       + +  + 
Sbjct: 176 ELTEVNHTGSGDFSAIESELDTKTHAVVSFDYGGTHYLDGHDLDLEAVIQMELEKQKYTF 235

Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKI 278
           K +       + ++  G +   E   +    F   + DF   L L     ++ L G    
Sbjct: 236 K-ENLAKINELPLEFNGFIELLEDGNLMDLSFKTPSSDFKNFLALIPKEYRANLDGVETS 294

Query: 279 SDGNVR--ISRYKLQSILPNSSTDE-DNKTKVSQDEENLLNFSENGAESMHDL-NETDFF 334
            D  V   I     ++ +PN   +   N       +        N       + N+T   
Sbjct: 295 GDFRVSGIIKGKTTETNIPNLDIEIVSNNASFKYPDLPK---RMNNINIDVKIKNDTGIT 351

Query: 335 EEEEKKNKNDDLKKDDIQYSV 355
           E    +  +   K D   ++ 
Sbjct: 352 ELTYIEINDLRFKIDQDTFTA 372


>gi|260433383|ref|ZP_05787354.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417211|gb|EEX10470.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 1130

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/375 (11%), Positives = 96/375 (25%), Gaps = 42/375 (11%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFID-----WTDFREDFERQATLIVG-KKIAVKGGIKIHIL 59
           L  +  +F +V++   +  + +          R+  E +    +G  KI   G     I 
Sbjct: 35  LWAVRGVFLLVVLAFISGLMVVGHRVHAPDWLRDRVESRLDQSLGGLKIRF-GDASFIIN 93

Query: 60  --PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
               P +   D+ I   E      ++  +       PLL G +R   + ++   +     
Sbjct: 94  EGWRPRLRLTDVSISDAEGRQ-IVQVSDMRASLAMRPLLRGHLRPKRITMNGARIALTRG 152

Query: 118 SKGVSNWFQRKSTMD-------------------MIHNVILEKIHVKGGRIKIIDQESDQ 158
             G         +                           L  + +    +   D    +
Sbjct: 153 RDGALTLTVGSGSSPMRQASTLADMIEQSDAVFMAPALSALTSVELDAITLDYRDLRLGR 212

Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKG-----SVIAEGTGNFDNKRSAFKITANFP-- 211
            + L   ++  +     I        + G     S+ A  T    +  + F ++      
Sbjct: 213 AWVLDGGHILATRSDRQIRLATGFSVLAGRDYVSSIEANYTSTLGSPDAQFGVSITDLPA 272

Query: 212 -AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270
                       L  L  PI   L G++             ++     +           
Sbjct: 273 TDVAAQTPALAWLQVLDTPISGALRGSIDGQGALGPVFATLNLGAGAVQPNPETRPVPFD 332

Query: 271 RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK---VSQDEENLLNFSENGAESMHD 327
                F        +   ++  +    S + + +     V     + +            
Sbjct: 333 SARTYFTYDPVQQVLDFNEVSVVSAWGSVNAEGRAYLQGVDAGTLDSMAVQFRLTGIR-- 390

Query: 328 LNETDFFEEEEKKNK 342
           +N  D F +E +  +
Sbjct: 391 VNPADLFIDELQLTQ 405


>gi|167588070|ref|ZP_02380458.1| hypothetical protein BuboB_22166 [Burkholderia ubonensis Bu]
          Length = 147

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 43/126 (34%), Gaps = 9/126 (7%)

Query: 2   LRRVLIGLGFLFS----VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK 55
           +RRV      +      V       +   +     D+R   ER  +  +  ++++ G + 
Sbjct: 1   MRRVFKVTLAVGLGTYFVASGAFLGLRYVLLPRVDDYRPRIERFVSDKLHAQLSI-GKLA 59

Query: 56  IHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            H     P V    + I  ++       +   +    +  LL     +  + +DQP L  
Sbjct: 60  PHWSGMQPGVEITGLTIRGRDGRL-ALSVPHATAALSWWSLLRLSPALSSLIVDQPDLVV 118

Query: 115 YLSSKG 120
             ++ G
Sbjct: 119 ERTADG 124


>gi|226194265|ref|ZP_03789864.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei
           Pakistan 9]
 gi|225933730|gb|EEH29718.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei
           Pakistan 9]
          Length = 1397

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 68/222 (30%), Gaps = 15/222 (6%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 +  E I ++GG ++  D + D    L+   ++I+     I+  +++ +     +
Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGIVHRIALQAPANGTL 223

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             G  +F  +     +       N      +   P+  P + 
Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265


>gi|167912404|ref|ZP_02499495.1| hypothetical protein Bpse112_18099 [Burkholderia pseudomallei 112]
          Length = 1397

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 77/249 (30%), Gaps = 24/249 (9%)

Query: 2   LRRVLIGLGFLFS---------VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKG 52
           LRRV  G+  +            + +    +P      ++R   E   +  +  ++ + G
Sbjct: 23  LRRVFKGVLAIAIAAYFIAATAFLGLRYLLLPRI---DEYRPRIEAFVSQKLHAELRI-G 78

Query: 53  GIKIHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111
            +  H     P V    + I  ++       +   +    +  L      +  + +D P 
Sbjct: 79  RLAPHWSGMQPGVDISRLTIRGRDG-RVALSVPHATAALSWRSLARFAPTLSSLVVDDPD 137

Query: 112 LNFYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
           L     + G                        +  E I ++GG ++  D + D    L+
Sbjct: 138 LLTERRADGSLFVAGVAVPTTKTGADDTFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELA 196

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
              ++I+     ++  +++ +     +  G  +F  +     +       N      +  
Sbjct: 197 LTGIRIAVLNDGLVHRIALQAPANGTLFHGPLDFRARFVHQALAPIGKPSNWTGDAYLST 256

Query: 224 FPLAYPIII 232
            P+  P + 
Sbjct: 257 GPVDLPTLA 265


>gi|120611341|ref|YP_971019.1| AsmA family protein [Acidovorax citrulli AAC00-1]
 gi|120589805|gb|ABM33245.1| AsmA family protein [Acidovorax citrulli AAC00-1]
          Length = 762

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/436 (7%), Positives = 92/436 (21%), Gaps = 94/436 (21%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFP--------------SVFFKDIR 70
             DW   R     + +   G+  A++G +      P P              +V    + 
Sbjct: 46  TFDWNRARPWINERVSAATGRHFAIEGDLSARWHWPQPVDMETGWRRWVPGLTVQADRMV 105

Query: 71  IDQKEDGSFE----SKIEGLSMRA-------------EFLPLLSGEIRVFDMYIDQPHLN 113
           +  + D           +    R                    S       +        
Sbjct: 106 LGNRTDFGRYGAVGMDADNADARVVERRAAAASAAASAPGVPASPSAAPASVPASAASAP 165

Query: 114 FYLSSKGVSNWFQRKSTMDMIH------------NVILEKIHVKGGRIKIIDQESDQ--- 158
                 G  +                        +V +  + ++   + +  +       
Sbjct: 166 EAARGAGSGSAPPPPMATVGSATASLKLLPLLVRHVSVGTLSIQAPDVALARRADGSNNW 225

Query: 159 ---------------------VYFLSDLNLQISARFLNIISPLSIDSIKGS----VIAEG 193
                                   ++D  L ++    ++     + +        V  + 
Sbjct: 226 TFDRPAPDGSASPNPWTVNVARLVVNDGRLAMADAQKDLAFVAHLATQSQPGPYGVRFDV 285

Query: 194 TGNFDNKRSAFKITANFP--AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
            G +   R      A      + + +   +Q    A  +  ++ G L             
Sbjct: 286 RGRYARARIEGSGQAGNALSLRQQDVQYPLQFKARAGTVRAEVEGTLANPLALAGMDLQV 345

Query: 252 SVAGDFSKLLNLELSAKKSR---------LSGNFKISDGNVRISRYKLQSILPNSSTDED 302
            +  +    L                   L G+ +          +       +      
Sbjct: 346 LLQAESMADLYPLTGIVLPNTPPFRTKGHLVGSLEPGRAVWDYRDFTGTVGQSD----LR 401

Query: 303 NKTKVSQDE-ENLLNFSENGAESMH-DLN-----ETDFFEEEEKKNKNDDLKKDDIQYSV 355
            +   +  +    L       +    DL       +    +E+  ++       D  ++ 
Sbjct: 402 GQLTYTSGQPRPRLTGEMASRQLRLADLGPVVGAPSGERPQEKGTSRRAGKVLPDAAFAT 461

Query: 356 NKKEEKDNSHDKENQE 371
           ++    D     + + 
Sbjct: 462 DRWNAMDLDLKFKGER 477


>gi|157165048|ref|YP_001467567.1| diaminopimelate epimerase (DAP epimerase) [Campylobacter concisus
           13826]
 gi|112801143|gb|EAT98487.1| conserved hypothetical protein [Campylobacter concisus 13826]
          Length = 1112

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 51/390 (13%), Positives = 116/390 (29%), Gaps = 34/390 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           +++ +  G     +L+    +  F      +    +         + V         PF 
Sbjct: 5   KKIALITGICVVSLLLIYTLLGFFGLPYAIKNIAPKYLKD-YNATLFVS---DAKFNPF- 59

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +    +    +    S     + + ++ +   +    + +    +D+P +      K   
Sbjct: 60  TFEL-NATNAELNTTSPLFSTKQIDLKLKPFSIFKKLVEIDIFRLDEPKVKIARDKKANF 118

Query: 123 NW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS--DLN-----L 167
           N+           +       N  L    +  G     DQ   + + +S  D+N     L
Sbjct: 119 NFSNFISDDNATSEDNSTSSINFALNNAKIIKGSFSYSDQNLTKPFNVSFDDINYELSSL 178

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
                        S  S+   +   G    +  +    ++    +        I    L 
Sbjct: 179 NTKKNSAGSHIFDSNSSLAHKIDLNGDIKLNPLKIEGNVSIKDFSIKPVAISFINNDTLN 238

Query: 228 YP-IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
               II+L  N   N  +              K L+L+  A +  L        G + + 
Sbjct: 239 LKNAIINLKINYALNADENATKINLKDGFLNVKGLSLDEGANELSL--------GELELP 290

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-EEEEKKNKNDD 345
           ++ L S + + +    N + V+ ++      +   +    +LNE        EK   N  
Sbjct: 291 KFDLDSKIADKTEAALNLSAVNLNDI-SFKSAIAASVKSLNLNEISLLANLNEKSELNAT 349

Query: 346 LKKDDIQYSVNKKEEKDNSHDKENQENFSG 375
            K  ++  +  K +E D   +  N ++ + 
Sbjct: 350 AKLKNMGANALKIDEAD--RNLANLKDINA 377


>gi|78212558|ref|YP_381337.1| hypothetical protein Syncc9605_1024 [Synechococcus sp. CC9605]
 gi|78197017|gb|ABB34782.1| conserved hypothetical protein [Synechococcus sp. CC9605]
          Length = 1473

 Score = 66.8 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 70/233 (30%), Gaps = 2/233 (0%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89
           +  R   ER  +  +G  + +     +  L    +     RI        E  + GL + 
Sbjct: 28  SRVRPGLERTLSGPLGHDVDIGPYEGLRPL-GLGIAIGPTRILPSAADRSELSLAGLEVS 86

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149
              L  L     V  + + +       +  G    F   S    +  + ++        I
Sbjct: 87  LAPLASLRRLQPVLQITVHKLRGQLQANETGSYWTFGPLSGDGPLPRLGVQYRLADPALI 146

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209
           +   Q+       S   +++   F +  S L     +G++  +G G++D +    +   +
Sbjct: 147 RFGPQQQTLELR-SRGAVRLGEAFFSTASELRWVEREGALRLDGQGHWDRRSFRLRTRLD 205

Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262
                   ++      L     +     + W +      G  S+       LN
Sbjct: 206 RLKLKPLAAVIAPAQDLDASGTLAGDVQIGWADGALNCRGGLSLKRLKLAALN 258


>gi|126440449|ref|YP_001060299.1| hypothetical protein BURPS668_3288 [Burkholderia pseudomallei 668]
 gi|126219942|gb|ABN83448.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei
           668]
          Length = 1397

 Score = 66.8 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 68/222 (30%), Gaps = 15/222 (6%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 +  E I ++GG ++  D + D    L+   ++I+     I+  +++ +     +
Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGIVHRIALQAPANGTL 223

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             G  +F  +     +       N      +   P+  P + 
Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265


>gi|53720444|ref|YP_109430.1| hypothetical protein BPSL2836 [Burkholderia pseudomallei K96243]
 gi|52210858|emb|CAH36846.1| putative membrane protein [Burkholderia pseudomallei K96243]
          Length = 1397

 Score = 66.8 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 68/222 (30%), Gaps = 15/222 (6%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 +  E I ++GG ++  D + D    L+   ++I+     I+  +++ +     +
Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGIVHRIALQAPANGTL 223

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             G  +F  +     +       N      +   P+  P + 
Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265


>gi|299530456|ref|ZP_07043876.1| AsmA [Comamonas testosteroni S44]
 gi|298721432|gb|EFI62369.1| AsmA [Comamonas testosteroni S44]
          Length = 1298

 Score = 66.8 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 44/393 (11%), Positives = 114/393 (29%), Gaps = 54/393 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LRR++  +  L  + L+    VP        +   E++A   +G+ + V    KI   P+
Sbjct: 10  LRRLIWSVLALLLLWLLLWAVVPWV-----AKSQLEKRAAEKLGRGVHVG---KIEFAPW 61

Query: 62  -PSVFFKDIRIDQK--------------------EDGSFESKIEGLSMRAEFLPLLSGEI 100
             S+   ++ ID+                          + +I+ + + A    L     
Sbjct: 62  AMSITLHELVIDKAIKKVAETAHPEGSAAQKDLKSAAEPQLQIKRIFINASAQSLFRLAP 121

Query: 101 RVFDMYIDQPHLNFYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKII 152
            +  + +D P +     S G  +                    N  L  I ++ GRI++ 
Sbjct: 122 VLDAIEVDAPVVRLTQHSLGKLDIDDVIARLSEPEDEEPSKPLNFALYNIALRDGRIELN 181

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212
           D+   + + L DL L I                +  V+     + +  +      +    
Sbjct: 182 DEFVQRKHELKDLQLSIP------FISNLASKREIKVLPHLAFDLNGSKFDTSGESTPFT 235

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
             +  +++++   +     +   G +  +      SGV        ++   +       +
Sbjct: 236 DTRQTAMQLKWEHIDLAPYL---GYVPASVPVQPLSGVLDT---DLQISFEQKDQPVVSI 289

Query: 273 SGNFKISD----GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN-GAESMHD 327
           SG   + +               ++       +  + +++ +    +    +    +   
Sbjct: 290 SGKLALGNVAVQDRQSAPLLNFDALEVQLKNVQPLQNQIALESVRWVKPEVHASRNAQGV 349

Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEE 360
           +N               +    +   +      
Sbjct: 350 INWLGLNAPTGAPAAPLEKAVPEPASAEASTPA 382



 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/288 (9%), Positives = 83/288 (28%), Gaps = 49/288 (17%)

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
           +   ++ +  ++        + L ++ + +  L  +I +  +   +P ++   +++GV N
Sbjct: 293 LALGNVAVQDRQSA-PLLNFDALEVQLKNVQPLQNQIALESVRWVKPEVHASRNAQGVIN 351

Query: 124 W--------------------------------FQRKSTMDMIHNVILEKIHVKGGRIKI 151
           W                                  +         V +++  ++GG +  
Sbjct: 352 WLGLNAPTGAPAAPLEKAVPEPASAEASTPAQADAKAEKPGKPLVVGVQQFDIEGGIVHW 411

Query: 152 ID----------QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201
            D            +  V    +L   ++A      +     + +  V        D + 
Sbjct: 412 QDAATGAAPAALTLAPLVLQAKNLAWPMNAPLQLTATAGLQAAEQARVEGAARLAVDGEA 471

Query: 202 SAFKITANFPAKNKAI----SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGD 256
           +      N   +   +          F      +++    + W E   +      +    
Sbjct: 472 TDKAGNLNLKLEQMPLQWVQPYMQAHFKPQLSAMLNTDARISWGEGGVVAEVAELTADKL 531

Query: 257 FSKLLNLELSAKKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDN 303
             +     ++ ++ ++SG    ++   V++    +Q     +  D   
Sbjct: 532 QLQDKQAPVNIEQIKVSGVQVDLAARQVQVEAIAVQKPQLAALRDAQG 579


>gi|15599929|ref|NP_253423.1| hypothetical protein PA4735 [Pseudomonas aeruginosa PAO1]
 gi|9950996|gb|AAG08121.1|AE004887_5 hypothetical protein PA4735 [Pseudomonas aeruginosa PAO1]
          Length = 1088

 Score = 66.8 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 97/335 (28%), Gaps = 38/335 (11%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M + +   +  L    LV      L I     R    +Q          ++   +I   P
Sbjct: 1   MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLR-VANQQLAQYATVPARLE---RIEFNP 56

Query: 61  F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           F   +    +R+ ++++   +     L    +   L   ++ + D+ ++ PH       K
Sbjct: 57  FSLELTLWGLRLGEEKN--PQLAFRRLYANLQLDSLWKRQLHLADVELEGPHTELLFGEK 114

Query: 120 GVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
           G  N                       + +++I +  G +   D    +     D +   
Sbjct: 115 GQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPV---DFSFDP 171

Query: 170 SARFLNIISPLSIDSIKGSVIA----EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
               L+ +S L  D  K +++A     G  +++   +   IT+      K I LK     
Sbjct: 172 LGFELHNLSTLPDDGAKMTLVATGPNGGRLDWEGDLTLVPITSRGHLSVKDIQLKAWWPY 231

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN---------- 275
           +     + L   +                    K          +   G           
Sbjct: 232 VRDNAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSINSPQGKPLAKLASLDV 291

Query: 276 ----FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
                 ++   V +   + Q +   ++ ++D +  
Sbjct: 292 AATTLDLAKQEVVLGEVRSQGLEAWAAREKDGQLD 326


>gi|167904144|ref|ZP_02491349.1| hypothetical protein BpseN_17981 [Burkholderia pseudomallei NCTC
           13177]
          Length = 1397

 Score = 66.8 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 +  E I ++GG ++  D + D    L+   ++I+     ++  +++ +     +
Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 223

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             G  +F  +     +       N      +   P+  P + 
Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265


>gi|76811265|ref|YP_334703.1| hypothetical protein BURPS1710b_3332 [Burkholderia pseudomallei
           1710b]
 gi|254261325|ref|ZP_04952379.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei
           1710a]
 gi|76580718|gb|ABA50193.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei
           1710b]
 gi|254220014|gb|EET09398.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei
           1710a]
          Length = 1397

 Score = 66.8 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 77/249 (30%), Gaps = 24/249 (9%)

Query: 2   LRRVLIGLGFLFS---------VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKG 52
           LRRV  G+  +            + +    +P      ++R   E   +  +  ++ + G
Sbjct: 23  LRRVFKGVLAIAIAAYFIAATAFLGLRYLLLPRI---DEYRPRIEAFVSQKLHAELRI-G 78

Query: 53  GIKIHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111
            +  H     P V    + I  ++       +   +    +  L      +  + +D P 
Sbjct: 79  RLAPHWSGMQPGVDISRLTIRGRDG-RVALSVPHATAALSWRSLARFAPTLSSLVVDDPD 137

Query: 112 LNFYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
           L     + G                        +  E I ++GG ++  D + D    L+
Sbjct: 138 LLTERRADGSLFVAGVAVPTTKTGADDTFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELA 196

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
              ++I+     ++  +++ +     +  G  +F  +     +       N      +  
Sbjct: 197 LTGIRIAVLNDGLVHRIALQAPANGTLFHGPLDFRARFVHQALAPIGKPSNWTGDAYLST 256

Query: 224 FPLAYPIII 232
            P+  P + 
Sbjct: 257 GPVDLPTLA 265


>gi|323138640|ref|ZP_08073707.1| AsmA family protein [Methylocystis sp. ATCC 49242]
 gi|322396128|gb|EFX98662.1| AsmA family protein [Methylocystis sp. ATCC 49242]
          Length = 643

 Score = 66.8 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/276 (11%), Positives = 70/276 (25%), Gaps = 15/276 (5%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI 83
           P     T   +    Q     G  +A +G   + + P P +  + +    +       + 
Sbjct: 51  PWLFSPTALLDAISGQLQTSSGLYVATRGRTTLSLTPRPHISIQGVAFADRNGAL-IIEA 109

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK---------GVSNWFQRKSTMDMI 134
           + L    +  PL +G + V  + + +P     L  K           +            
Sbjct: 110 DQLHGVLKLFPLFAGRLEVDSLALVRPRARLDLDQKPIDAPGAAARAAATRPATPEAQKA 169

Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
            NV L  I +  G +++     D      D +L             S D     +     
Sbjct: 170 DNVRLGVIAIVDGSLRVRRLGQDYAADRIDASLDWRRIGEAATFTASFDWRGERLQTVLW 229

Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254
                     + +      +               +    +G++  +             
Sbjct: 230 VARPAMLLRGEQSVATARLDGESVRLEAQGVAQTGLNARFYGHVAGSSPSVR-----QAL 284

Query: 255 GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
           G F     L      ++ S    +     ++   +L
Sbjct: 285 GVFGLSAPLPGPFGDAQFSAQAYLGPREAQLKELRL 320


>gi|237813689|ref|YP_002898140.1| hypothetical protein GBP346_A3466 [Burkholderia pseudomallei
           MSHR346]
 gi|237505895|gb|ACQ98213.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
          Length = 1397

 Score = 66.8 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 +  E I ++GG ++  D + D    L+   ++I+     ++  +++ +     +
Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 223

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             G  +F  +     +       N      +   P+  P + 
Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265


>gi|217420393|ref|ZP_03451898.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei
           576]
 gi|217395805|gb|EEC35822.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei
           576]
          Length = 1397

 Score = 66.8 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 +  E I ++GG ++  D + D    L+   ++I+     ++  +++ +     +
Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 223

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             G  +F  +     +       N      +   P+  P + 
Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265


>gi|254180750|ref|ZP_04887348.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei
           1655]
 gi|184211289|gb|EDU08332.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei
           1655]
          Length = 1397

 Score = 66.8 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 +  E I ++GG ++  D + D    L+   ++I+     ++  +++ +     +
Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 223

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             G  +F  +     +       N      +   P+  P + 
Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265


>gi|254194944|ref|ZP_04901374.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei
           S13]
 gi|169651693|gb|EDS84386.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei
           S13]
          Length = 1397

 Score = 66.8 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 +  E I ++GG ++  D + D    L+   ++I+     ++  +++ +     +
Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 223

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             G  +F  +     +       N      +   P+  P + 
Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265


>gi|330501863|ref|YP_004378732.1| hypothetical protein MDS_0949 [Pseudomonas mendocina NK-01]
 gi|328916149|gb|AEB56980.1| membrane protein-like protein [Pseudomonas mendocina NK-01]
          Length = 1269

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 101/310 (32%), Gaps = 21/310 (6%)

Query: 7   IGLGFLFSVVLVGAFTVPL---FID-WTDFREDFERQATLIVGKKIAVKGGIKIHI-LPF 61
            GLG   +V+++ A  V L    +    ++R + E +A+  +G  + + G ++       
Sbjct: 10  WGLGLCAAVLVLAALYVSLGRELVPMVAEYRLELEDRASAQLGVPVRI-GSLEGRWQGFA 68

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKG 120
           P +  +D+R+ ++ +G     +E + +  +    L   + R+  +  D   LN   +++G
Sbjct: 69  PLLVARDVRLGEEGEG---LSLERVQLVPDVAASLMARQPRIAHLQFDGLQLNVQQNAEG 125

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
              W  +         + +E++ ++  +        D    +  L+       L     L
Sbjct: 126 --GWQLQGLPKRESPELNVERL-LQQLQAVHRISLLDSRVVVQPLD---QEPLLLSYVDL 179

Query: 181 SIDSIKGSVIAEGTGNF-DNKRSAFKITANFP---AKNKAISLKIQLFPLAYPIIIDLFG 236
           S+     S   +G     D +  A  +         +     L + L    +   +    
Sbjct: 180 SLRYDSNSQRLDGRLLLPDGQPVALSLRTRMQPETWREAESQLYLSLPQSDWASWLPKSL 239

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
              W  +     G F + G    L    L      L G  +     V I      +    
Sbjct: 240 LGDWQVQHLQAGGEFWLEGRGLALHQGALRLHAPELVGG-QAKRKAVTIKDLAFNAFFAQ 298

Query: 297 SSTDEDNKTK 306
                  +  
Sbjct: 299 DEQGVRAQID 308


>gi|167920358|ref|ZP_02507449.1| hypothetical protein BpseBC_17559 [Burkholderia pseudomallei
           BCC215]
          Length = 1397

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 68/222 (30%), Gaps = 15/222 (6%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 +  E I ++GG ++  D + D    L+   ++I+     I+  +++ +     +
Sbjct: 165 TFSTWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGIVHRIALQAPANGTL 223

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             G  +F  +     +       N      +   P+  P + 
Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265


>gi|254299158|ref|ZP_04966608.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei
           406e]
 gi|157808768|gb|EDO85938.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei
           406e]
          Length = 1397

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 +  E I ++GG ++  D + D    L+   ++I+     ++  +++ +     +
Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 223

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             G  +F  +     +       N      +   P+  P + 
Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265


>gi|119944883|ref|YP_942563.1| membrane protein-like protein [Psychromonas ingrahamii 37]
 gi|119863487|gb|ABM02964.1| membrane protein-like protein [Psychromonas ingrahamii 37]
          Length = 1294

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 102/381 (26%), Gaps = 22/381 (5%)

Query: 2   LRRVLIGLGF-LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-L 59
           L+R+   +   LF +  +   +  +F+   D++    +  +      +  +  I   I  
Sbjct: 9   LKRIYALIAVKLFILAFLLTLSRIIFVRIDDYKIYAMQWLSSEYNVNLTFE-DISAGIDF 67

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSS 118
               +    I +    D  ++ K++ L +   F   LS   +    +      +      
Sbjct: 68  SGLILNVSGIELVDSVDLPYQFKLDHLFIYLNFWQSLSEQTLVFNRISAQGADITIK--P 125

Query: 119 KGVSNWFQRKSTMDMIH-----NVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISAR 172
            G +N     S++          V L K  +K  ++   D  + ++   +  LN      
Sbjct: 126 TGKNNAKSESSSVTTAALQKILLVQLSKFSIKDSQLHFTDPLQRNKTVVIEKLNWINEEG 185

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
                   S+ +           +   +           A N  IS  +         + 
Sbjct: 186 RHQGRGYASMLNGLADNSLNFVVDLVGQNEPLAGHLYVAADNFNISHYLTAQVNPNAQLF 245

Query: 233 DLFGNLFWNEKQPIY---SGVFSVAGDFSKLLNLELSAKKSRLSG---NFKISDGNVRIS 286
           D         +            +         L       +++     F  ++    + 
Sbjct: 246 DAVLGFKAWAEFSSNRLQKLQLQLNNTQLHWSQL-GQDYLWKINSGLVQFTNTNDAWLLD 304

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346
            Y L      +                   F+ +G     DL        + +    + L
Sbjct: 305 SYNLDIES--NQKKMQGLNVQGHGTAASAYFALDGVNIK-DLMPLYLLRSDLQAKTINSL 361

Query: 347 KKDDIQYSVNKKEEKDNSHDK 367
              D+   ++      NS DK
Sbjct: 362 SAFDLNARLDDFSLFKNSADK 382


>gi|87124037|ref|ZP_01079887.1| hypothetical protein RS9917_10516 [Synechococcus sp. RS9917]
 gi|86168606|gb|EAQ69863.1| hypothetical protein RS9917_10516 [Synechococcus sp. RS9917]
          Length = 1464

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/286 (11%), Positives = 91/286 (31%), Gaps = 12/286 (4%)

Query: 31  DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
             +   E Q +  +G  + +     +       +     R+        ++ I GL+++ 
Sbjct: 30  RLKPSLESQFSKPLGHPLEIGPFQGLRPW---GLAIGPSRVLPGLKDQSKASISGLTLQL 86

Query: 91  EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIK 150
           + L  L     V  + +    ++   +++G   W    S+      + L+       R+K
Sbjct: 87  DPLASLRRWRPVAVVSLRGARVDLRRNAQGAY-WVPGPSSGGKPPKLDLQLKLQDPARLK 145

Query: 151 IIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF 210
           I       +      ++ ++  + ++   +++   +G V  +  G +   +   +     
Sbjct: 146 I-QPAGLTLSADGRASVHLAENWADVALKVALPQ-QGRVSLKARGRWVKPQLHLQTRLER 203

Query: 211 PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270
                   L     PLA+   I     L W++ +   +G  S+ G       L+ + +  
Sbjct: 204 VRLEPFQGLLPATMPLAFRGQIGGDLRLSWSQGRAGCAGALSLVGLEVSGKPLQSALRNP 263

Query: 271 RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN 316
           +     +  D  + +     +               V  ++   L 
Sbjct: 264 QW--RLRCRDQRLSLPASTWRYGA----YQASLSGHVDLNQALDLK 303


>gi|325279093|ref|YP_004251635.1| hypothetical protein Odosp_0360 [Odoribacter splanchnicus DSM
           20712]
 gi|324310902|gb|ADY31455.1| hypothetical protein Odosp_0360 [Odoribacter splanchnicus DSM
           20712]
          Length = 791

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 51/425 (12%), Positives = 123/425 (28%), Gaps = 61/425 (14%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           ++L       +V++     +         +    + +  ++G++I +KG + I+I     
Sbjct: 14  KILKISTITVAVLVAVFIIIACIFPP-IAKNYINKHSKELIGRQINIKG-LYINIFTG-Y 70

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL----------- 112
               D ++ +  D       + LS+      LL+ E+R+  + +  P +           
Sbjct: 71  ARITDFQLLEANDLDTFVSFDTLSVDMSLHRLLANEVRINHISLTNPSVKVLQQGSEFNF 130

Query: 113 -------------------------NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGG 147
                                         +    +     +T      + L  I ++GG
Sbjct: 131 DDLLALGSTDTLSADSPAAQPVASSTLQSPASDSLSPASPATTSANPLAIALYNISIQGG 190

Query: 148 RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207
            I   D E + V+ + +  LQI      +        +  ++     G+       + + 
Sbjct: 191 HILYKDLERNSVWQMENFGLQI----PGVYFSGQNTDVGIALNFNDGGHL-QTAIQYNME 245

Query: 208 ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA 267
           A     +  ++    + P+  P + D    +                 +    L +  + 
Sbjct: 246 AGNYLLDIDLT-NFSIAPIQ-PYLTDFT-RISTIGGILNTHLNIEGNAEHVTELVVRGNL 302

Query: 268 KKSRLSGNFKISDGNVRISR--YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
             + LS         +        +++I P  +    N   V+   +      ++G  +M
Sbjct: 303 GINHLSLADASHKEVLATDSIYIDMETINPGKAIFHFNTIAVN-GIKTGFELRKDG-NTM 360

Query: 326 HDLNET-------DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE---NFSG 375
            DL             E+             D + S  +      +   +       FS 
Sbjct: 361 SDLFPETPEDTVRGAAEQTPAAGPQTTATAPDFKVSTFRINNSLFTFKDQTLRHPFTFSL 420

Query: 376 DKMIL 380
           + + L
Sbjct: 421 ENINL 425


>gi|119503733|ref|ZP_01625815.1| hypothetical protein MGP2080_01381 [marine gamma proteobacterium
           HTCC2080]
 gi|119460241|gb|EAW41334.1| hypothetical protein MGP2080_01381 [marine gamma proteobacterium
           HTCC2080]
          Length = 577

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 85/244 (34%), Gaps = 13/244 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +   L  +G L ++V+VG   +P+FID        ++Q       ++ V+G + + + P 
Sbjct: 1   MLVFLYVVGALIALVVVGLVLLPMFIDEQAVINLAQQQFKEATAGELVVEGNVDLGLFPE 60

Query: 62  PSVFFKDIRIDQKEDGSF----ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
             +   +  ID               +G+ +    L +LSG   V D+++    +    +
Sbjct: 61  LKLNLGNTTIDLPPQTEDGSRLVVTAQGVDIGLSVLAILSGSDEVGDVHLSGADVQLLDN 120

Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
           +  +         +    N+  + I +KG      D +S  +    D  +++ + F  + 
Sbjct: 121 TGALQTQLTITDLVAQGLNMAGQPIGLKGALAVAADPQSQPIQIRFDGAVRVPSTFDQVT 180

Query: 178 SPLSIDSIKGSV------IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
                  I G++         GT       +   +  N P       L   +        
Sbjct: 181 LDGFSTEIIGALSAPVKTELSGTAKLSPLSADLDLNVNSPGGVIDADLNYNVAASP---Q 237

Query: 232 IDLF 235
           IDL 
Sbjct: 238 IDLD 241


>gi|254509638|ref|ZP_05121705.1| hypothetical protein RKLH11_170 [Rhodobacteraceae bacterium KLH11]
 gi|221533349|gb|EEE36337.1| hypothetical protein RKLH11_170 [Rhodobacteraceae bacterium KLH11]
          Length = 1130

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/338 (11%), Positives = 86/338 (25%), Gaps = 37/338 (10%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFID-----WTDFREDFERQATLIVGKKIAVK-GGIKIHI- 58
           L  L  +F +V +   T  + I          R+  E +    +G  + ++ G +   I 
Sbjct: 34  LWALRGVFVLVFLALITGFMVIGQHVHVPAWVRDRVETRLDQALGG-VQIRFGDVSFIIH 92

Query: 59  -LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
               P +   D+RI         +++  L       PLL G +R   + +    +     
Sbjct: 93  EGWRPRLQLTDVRISDAAGQQ-IAEVADLRASLAMRPLLRGHVRPKRIILQGAQIALTRG 151

Query: 118 SKGVSN-------------------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
             G  +                        +         L  + +    +   D    +
Sbjct: 152 VDGALSLTVGAGSAPVGQARNLAQLIEASDAVFQSPALSALSSVELDAITLDYRDLRLGR 211

Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKG-----SVIAEGTGNFDNKRSAFKITANFP-- 211
            + L   ++  +     +        + G     ++ A  T    +  + F I+      
Sbjct: 212 SWVLDGGHILATRNAREVRLATGFSVLAGRDYVSTIEANYTSALGSPAAQFGISITDLPA 271

Query: 212 -AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270
                       +  L  PI   L G +             ++     +        K  
Sbjct: 272 EDIGGHSPALAWMQVLRTPISGALRGRVDAQGALGPVFATLNLGAGAVQPTPETRPIKFD 331

Query: 271 RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308
                F     +  +   ++           + K  + 
Sbjct: 332 GARTYFTYDPKHEVLDFNEVSINSAWGKVQAEGKAFLQ 369


>gi|121599403|ref|YP_991839.1| hypothetical protein BMASAVP1_A0490 [Burkholderia mallei SAVP1]
 gi|124385683|ref|YP_001027094.1| hypothetical protein BMA10229_A1109 [Burkholderia mallei NCTC
           10229]
 gi|254178934|ref|ZP_04885588.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
 gi|254202604|ref|ZP_04908967.1| conserved hypothetical protein [Burkholderia mallei FMH]
 gi|254207943|ref|ZP_04914293.1| conserved hypothetical protein [Burkholderia mallei JHU]
 gi|254355917|ref|ZP_04972195.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
 gi|121228213|gb|ABM50731.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
 gi|124293703|gb|ABN02972.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
 gi|147746851|gb|EDK53928.1| conserved hypothetical protein [Burkholderia mallei FMH]
 gi|147751837|gb|EDK58904.1| conserved hypothetical protein [Burkholderia mallei JHU]
 gi|148024892|gb|EDK83070.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
 gi|160694848|gb|EDP84856.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
          Length = 1397

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 50  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 104

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 105 VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 164

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 +  E I ++GG ++  D + D    L+   ++I+     ++  +++ +     +
Sbjct: 165 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 223

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             G  +F  +     +       N      +   P+  P + 
Sbjct: 224 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 265


>gi|289676061|ref|ZP_06496951.1| hypothetical protein PsyrpsF_22495 [Pseudomonas syringae pv.
           syringae FF5]
          Length = 376

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 101/307 (32%), Gaps = 19/307 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A+  +G  +++ G ++     F
Sbjct: 13  RWGLSLCALILVLAALYVSLGRQLTPLVAEYRVDVETRASSALGIPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P +   D+ + +   G+   +++ + +  +    LL+ ++R+  + +D    +      
Sbjct: 72  APVLLAHDVMVGE---GASALRLDRVRVVPDLWESLLARDVRIAHLEVDGLQFSLRQDKD 128

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           G  +        D   +    +  ++  ++       D    +   +    A        
Sbjct: 129 GAWSVQGLPVHNDSPFDP---EQVLRQMQMVAHLSLLDSQVTVQPFDA---APLTLTYVN 182

Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235
           LS+D+   +   +      D +  A  + +       K+    +   L    +   +   
Sbjct: 183 LSLDTGGYAQRLDARLTLPDGQPVALNVRSRIQASQWKDGEADVYASLPQSDWAKWLPKS 242

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
               W   +    G   ++     + ++       ++ G +     +  I    L +   
Sbjct: 243 LTREWTLSKLQAGGEVWLSWGKGTVQSVTTRLNAPQVKGVYAGRKPS-TIDNLALNAWFA 301

Query: 296 NSSTDED 302
            + T  D
Sbjct: 302 RTDTGFD 308


>gi|255014201|ref|ZP_05286327.1| outer membrane assembly protein [Bacteroides sp. 2_1_7]
          Length = 1099

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/335 (11%), Positives = 97/335 (28%), Gaps = 42/335 (12%)

Query: 10  GFLFSVVLVGAFTVPL-FIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL---PFPSVF 65
           G  F + L+G   +    +           +    +   +  +  +++      P+  V 
Sbjct: 19  GIFFILPLIGVGILKWAVLPPEKLTPLVVEKTNEFIEAHLECE-RVELTYFETYPYLGVK 77

Query: 66  FKDIRIDQK-------------EDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPH 111
             + R+                         +   +       L SG++ +  + +D   
Sbjct: 78  LTNGRLISNLAEDSIGYQEDLMIPSDSLLSFKKAIVVFNPTDYLFSGKVTIPRVIMDSIR 137

Query: 112 LNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
              Y++ +G +NW   +S MD         +  + L+++H+  G     D++ D    + 
Sbjct: 138 FYGYVNEEGKANWEIYQSEMDSVDESSSSPLPKIDLQQVHITNGHFVYDDRQQDLYTAID 197

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL---K 220
              L I        + L +++   S++          + A +        +    +    
Sbjct: 198 GFFLHIDGLLTQRGNKLDVETGSSSIVFRSPSYSLANKLALRFKGRLLLADGLRRIGLRD 257

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL------------NLELSAK 268
            +L     P   D F      +        F +       L            +  L+  
Sbjct: 258 AELLVNNLPFTADGFMVPATEDNPSRIDMTFGLKVSDMNDLLHFIPDEYFKDRDKTLAEG 317

Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
           +  L G+ +   G+  +    L   + + S     
Sbjct: 318 RIILEGDIRGELGDSIVPTVNLCCKIEDGSYHVKG 352


>gi|301309341|ref|ZP_07215283.1| putative outer membrane assembly protein [Bacteroides sp. 20_3]
 gi|300832430|gb|EFK63058.1| putative outer membrane assembly protein [Bacteroides sp. 20_3]
          Length = 1099

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/335 (11%), Positives = 97/335 (28%), Gaps = 42/335 (12%)

Query: 10  GFLFSVVLVGAFTVPL-FIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL---PFPSVF 65
           G  F + L+G   +    +           +    +   +  +  +++      P+  V 
Sbjct: 19  GIFFILPLIGVGILKWAVLPPEKLTPLVVEKTNEFIEAHLECE-RVELTYFETYPYLGVK 77

Query: 66  FKDIRIDQK-------------EDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPH 111
             + R+                         +   +       L SG++ +  + +D   
Sbjct: 78  LTNGRLISNLAEDSIGYQEDLMIPSDSLLSFKKAIVVFNPTDYLFSGKVTIPRVIMDSIR 137

Query: 112 LNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
              Y++ +G +NW   +S MD         +  + L+++H+  G     D++ D    + 
Sbjct: 138 FYGYVNEEGKANWEIYQSEMDSVDESSSSPLPKIDLQQVHITNGHFVYDDRQQDLYTAID 197

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL---K 220
              L I        + L +++   S++          + A +        +    +    
Sbjct: 198 GFFLHIDGLLTQRGNKLDVETGSSSIVFRSPSYSLANKLALRFKGRLLLADGLRRIGLRD 257

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL------------NLELSAK 268
            +L     P   D F      +        F +       L            +  L+  
Sbjct: 258 AELLVNNLPFTADGFMVPATEDNPSRIDMTFGLKVSDMNDLLHFIPDEYFKDRDKTLAEG 317

Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
           +  L G+ +   G+  +    L   + + S     
Sbjct: 318 RIILEGDIRGELGDSIVPTVNLCCKIEDGSYHVKG 352


>gi|157374970|ref|YP_001473570.1| hypothetical protein Ssed_1831 [Shewanella sediminis HAW-EB3]
 gi|157317344|gb|ABV36442.1| protein of unknown function DUF748 [Shewanella sediminis HAW-EB3]
          Length = 1013

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 50/408 (12%), Positives = 107/408 (26%), Gaps = 57/408 (13%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61
           R +   L        +    VP  ++          Q   ++ + + +    ++ I PF 
Sbjct: 23  RYLSALLASYLFFAGILGLVVPYAVEK-----QLPVQLGAMLKRPVQLD---EVKINPFT 74

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS--- 117
            +V     RID+ + G      + L+    F   L +G I +  + ++ P +        
Sbjct: 75  LNVSLTGFRIDETDHGD-FIGFDKLNFELCFWHSLFNGAISIDHVTLNAPFVFIERLNSK 133

Query: 118 --------------SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
                         +K            + + +VI+E + +    +   D  ++      
Sbjct: 134 QKIQFNFSDILAELAKSSEVPQAPPDKANALPHVIVENLSIANADLLYSDNVTNGQIHYP 193

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGT---------------GNFDNKRSAFKITA 208
            +NL++ A         +      S+   G                 N   +     I  
Sbjct: 194 AVNLKVKAFDTLNEIASAASGNHFSIHFVGDEGGEISTQGQIQVSPLNIVGELKLTAIKL 253

Query: 209 NFPAKNKAISLKIQLFPLAYPIIIDLFGNL-----FWNEKQPIYSGVFSVAG-DFSKLLN 262
                  +   + +L                        +     G FS+    FS    
Sbjct: 254 PQFWSFISDDFQAKLDTGQLNFKSHFEITSHATSNQAPIQVVTNQGAFSLENILFSHEQR 313

Query: 263 LELSAKKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321
             ++     L G    + D  V + R   + +  N+            D   L   S   
Sbjct: 314 PLMTLPLLALEGIELNLEDKLVVVERLHSEKLDLNAGITPQG-----IDIIPLFMPSFIS 368

Query: 322 AESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369
                +  + D  E E  +          +         +++   K  
Sbjct: 369 KADDSESKQVD--EPEANEQTPWSATLGGVSVKDYALNLQESLLTKNT 414


>gi|90417412|ref|ZP_01225336.1| AsmA family superfamily protein [marine gamma proteobacterium
           HTCC2207]
 gi|90330746|gb|EAS46021.1| AsmA family superfamily protein [marine gamma proteobacterium
           HTCC2207]
          Length = 625

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 96/301 (31%), Gaps = 14/301 (4%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           + +L  +  L  + L+    + + +D  D + + +  A    G ++++KG +    LP  
Sbjct: 6   KWLLKTVASLLVIALIAMSYLLIAMDPNDLKPEIKAAAASQ-GLELSLKGNLSWQFLPQI 64

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL---------SGEIRVFDMYIDQPHLN 113
            V  + +    +   S   KIE L +   +  LL         S ++    + I    + 
Sbjct: 65  GVVVEKVEFAHRTVASG--KIEELRLSVSWTELLIIGLSSGLSSDQVPAGSIAISNATIL 122

Query: 114 F-YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS-DLNLQISA 171
              L         +R +      ++  ++  V+           D    L+  ++     
Sbjct: 123 LAELVPNTFPIQLKRFNANVNNFSLSGDRFSVEASAQVFSGLTLDLDAALALQIDTNTGV 182

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
                +S L        +  +     +   +   +++N       +      FPL     
Sbjct: 183 IENLTVSDLEASVDGMELRGQFVTGNNFATAQGSLSSNRFDLKHLVKTIGMSFPLVKLPN 242

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
           +     L        ++   +    F+  L+++          +  I++  +R+S  +  
Sbjct: 243 MASKEALTAVSWNSSFNTDMNGFSTFNTQLDIDSQVLTIASKVDHSINNLYMRVSGEQFD 302

Query: 292 S 292
            
Sbjct: 303 I 303


>gi|150008451|ref|YP_001303194.1| outer membrane assembly protein [Parabacteroides distasonis ATCC
           8503]
 gi|149936875|gb|ABR43572.1| outer membrane assembly protein [Parabacteroides distasonis ATCC
           8503]
          Length = 1099

 Score = 66.4 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/335 (11%), Positives = 97/335 (28%), Gaps = 42/335 (12%)

Query: 10  GFLFSVVLVGAFTVPL-FIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL---PFPSVF 65
           G  F + L+G   +    +           +    +   +  +  +++      P+  V 
Sbjct: 19  GIFFILPLIGVGILKWAVLPPEKLTPLVVEKTNEFIEAHLECE-RVELTYFETYPYLGVK 77

Query: 66  FKDIRIDQK-------------EDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPH 111
             + R+                         +   +       L SG++ +  + +D   
Sbjct: 78  LTNGRLISHLAEDSIGYQEDLMIPSDSLLSFKKAIVVFNPTDYLFSGKVTIPRVIMDSIR 137

Query: 112 LNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
              Y++ +G +NW   +S MD         +  + L+++H+  G     D++ D    + 
Sbjct: 138 FYGYVNEEGKANWEIYQSEMDSVDESSSSPLPKIDLQQVHITNGHFVYDDRQQDLYTAID 197

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL---K 220
              L I        + L +++   S++          + A +        +    +    
Sbjct: 198 GFFLHIDGLLTQRGNKLDVETGSSSIVFRSPSYSLANKLALRFKGRLLLADGLRRIGLRD 257

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL------------NLELSAK 268
            +L     P   D F      +        F +       L            +  L+  
Sbjct: 258 AELLVNNLPFTADGFMVPATEDNPSRIDMTFGLKVSDMNDLLHFIPDEYFKDRDKTLAEG 317

Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
           +  L G+ +   G+  +    L   + + S     
Sbjct: 318 RIILEGDIRGELGDSIVPTVNLCCKIEDGSYHVKG 352


>gi|134280031|ref|ZP_01766742.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei
           305]
 gi|134248038|gb|EBA48121.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei
           305]
          Length = 1372

 Score = 66.4 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 25  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 79

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 80  VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 139

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 +  E I ++GG ++  D + D    L+   ++I+     ++  +++ +     +
Sbjct: 140 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 198

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             G  +F  +     +       N      +   P+  P + 
Sbjct: 199 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 240


>gi|53726217|ref|YP_103894.1| hypothetical protein BMA2335 [Burkholderia mallei ATCC 23344]
 gi|52429640|gb|AAU50233.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
          Length = 1368

 Score = 66.4 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 21  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 75

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 76  VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 135

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 +  E I ++GG ++  D + D    L+   ++I+     ++  +++ +     +
Sbjct: 136 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 194

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             G  +F  +     +       N      +   P+  P + 
Sbjct: 195 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 236


>gi|254468812|ref|ZP_05082218.1| conserved hypothetical protein [beta proteobacterium KB13]
 gi|207087622|gb|EDZ64905.1| conserved hypothetical protein [beta proteobacterium KB13]
          Length = 1278

 Score = 66.4 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/345 (11%), Positives = 117/345 (33%), Gaps = 12/345 (3%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-PFPSV 64
           +I L    ++++  A+   L  +   +++  E       G +  +K  + +      P  
Sbjct: 21  IISLILTTALIVFLAYQFYLIPNVESYKQKIENFIENETGGEAEIK-TLNVLWNITNPKF 79

Query: 65  FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124
             ++  I  K++     K+  +     +L L+  E  +  + +    +    +       
Sbjct: 80  QIRNFSITDKDNNKT-IKLNAIDFEISWLSLIKFEPVLNQIIVGDIDILVERTLDNKLKV 138

Query: 125 F-----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIIS 178
                 +  ++      +   +I +  G++   D   D +   +S +N   ++       
Sbjct: 139 AGIEIIESSNSNLSDWLLNQSEIRIINGKVTWRDHARDAEDLIISAINFTYTSPAYLSYL 198

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
                    +++++GT         F +      +     + + +   A+      + + 
Sbjct: 199 D-RHKFNLNALLSQGTKEKIYLNGFFDLDKISRLEEVNAKINLNI-SQAFLTSFKPWVDY 256

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS-DGNVRISRYKLQSILPNS 297
            ++ KQ       ++  +  ++  ++         GNF    + ++RI+     +I  N 
Sbjct: 257 PFDLKQGFGDLKLNMTLEKERIGEIKTLFYLENFVGNFNKDQNQHIRINELSGNAIFENH 316

Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342
              +         + + LN   +G E +   ++ + F+ +  + K
Sbjct: 317 DQRKKIAATNLNLKTDRLNVKNSGFEIISKNDKAESFKLKLNQLK 361


>gi|67642298|ref|ZP_00441056.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
 gi|126450123|ref|YP_001081745.1| hypothetical protein BMA10247_2216 [Burkholderia mallei NCTC 10247]
 gi|251766637|ref|ZP_02264514.2| conserved hypothetical protein [Burkholderia mallei PRL-20]
 gi|126242993|gb|ABO06086.1| conserved hypothetical protein [Burkholderia mallei NCTC 10247]
 gi|238523423|gb|EEP86861.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
 gi|243065333|gb|EES47519.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
          Length = 1372

 Score = 66.4 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 15/222 (6%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGS 78
              +P      ++R   E   +  +  ++ + G +  H     P V    + I  ++   
Sbjct: 25  YLLLPRI---DEYRPRIEAFVSQKLHAELRI-GRLAPHWSGMQPGVDISRLTIRGRDG-R 79

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--------QRKST 130
               +   +    +  L      +  + +D P L     + G                  
Sbjct: 80  VALSVPHATAALSWRSLARFAPTLSSLVVDDPDLLTERRADGSLFVAGVAVPTTKTGADD 139

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 +  E I ++GG ++  D + D    L+   ++I+     ++  +++ +     +
Sbjct: 140 TFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELALTGIRIAVLNDGLVHRIALQAPANGTL 198

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             G  +F  +     +       N      +   P+  P + 
Sbjct: 199 FHGPLDFRARFVHQALAPIGKPSNWTGDAYLSTGPVDLPTLA 240


>gi|296391561|ref|ZP_06881036.1| hypothetical protein PaerPAb_25563 [Pseudomonas aeruginosa PAb1]
          Length = 449

 Score = 66.1 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 95/335 (28%), Gaps = 38/335 (11%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M + +   +  L    LV      L I     R    +Q          ++   +I   P
Sbjct: 1   MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLR-VANQQLAQYATVPARLE---RIEFNP 56

Query: 61  F-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           F   +    +R+  +++   +     L    +   L   ++ + D  ++ PH       K
Sbjct: 57  FSLELTLWGLRLGDEKN--PQLAFRRLYANLQLDSLWKRQLHLADAELEGPHTELLFDEK 114

Query: 120 GVSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
           G  N                       + +++I +  G +   D    +     D +   
Sbjct: 115 GQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPV---DFSFDP 171

Query: 170 SARFLNIISPLSIDSIKGSVIA----EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
               L+ +S L  D  K +++A     G  +++   +   IT+      K I LK     
Sbjct: 172 LGFELHNLSTLPDDGAKMTLVATGPNGGRLDWEGDLTLVPITSRGHLSVKDIQLKAWWPY 231

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN---------- 275
           +     + L   +                    K          +   G           
Sbjct: 232 VRDNAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSINSPQGKPLAKLASLDV 291

Query: 276 ----FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
                 ++   V +   + Q +   ++ ++D +  
Sbjct: 292 AATTLDLAKQEVVLGEVRSQGLEAWAAREKDGQLD 326


>gi|313202411|ref|YP_004041069.1| hypothetical protein MPQ_2693 [Methylovorus sp. MP688]
 gi|312441727|gb|ADQ85833.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 1201

 Score = 66.1 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 43/360 (11%), Positives = 121/360 (33%), Gaps = 39/360 (10%)

Query: 2   LRRVLIGLGF-LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +R +L+   F +F+ V++              R      A   +  + +V+    +   P
Sbjct: 5   IRTLLLTTPFKIFAGVIIAYLLFAYLAVDPLARRILPWFAENKLASQASVE---HVKFDP 61

Query: 61  -FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
               +    +++  +++G+  +  + L +  E   L     R+ D+ +  PH+   + + 
Sbjct: 62  LRLILTIDQLKL-NQKNGAPLASFDRLYINLETSGLFRFAWRIKDIRLTAPHVAVEVGAD 120

Query: 120 GVSNWFQR---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
           G  NW             +    +  ++++ I ++GG +  +++   Q + L+   L + 
Sbjct: 121 GRLNWADLIARLNEDKDDTPSTSMPRLLIDHILIEGGDVAYVERNRPQPFELALQPLGLE 180

Query: 171 ARFLNI--------ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--------FPAKN 214
              L+         +    + +  GS+  +G    +   S   +              K+
Sbjct: 181 LDGLSTLPEDRGDYLIVAKLPADGGSLKWKGDIGLNPLVSQGVLELQGIKLAPLMQIVKH 240

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQP-----IYSGVFSVAGDFSKLLNLELSAKK 269
           +A+ +++    L   +          +++ P     +     ++    +++      A+ 
Sbjct: 241 QALPVRLTQGELQSRLTYSFAMVKGADQQDPTPEAIVQDLSLTLENVAAEVQGQHGPAQL 300

Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE-NGAESMHDL 328
                   ++   +  S  K   +   +      K  + Q +  L      +     +DL
Sbjct: 301 HL--KQVSVAIPRLDFSMRKGTELTFKNMRLGLQKLVLQQAKTPLFQLDAIDVQGIDYDL 358


>gi|218259920|ref|ZP_03475435.1| hypothetical protein PRABACTJOHN_01096 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224837|gb|EEC97487.1| hypothetical protein PRABACTJOHN_01096 [Parabacteroides johnsonii
           DSM 18315]
          Length = 805

 Score = 66.1 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 46/423 (10%), Positives = 120/423 (28%), Gaps = 56/423 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLF---------IDWTDFREDFERQATLIVGKKIAVKG 52
           ++R       +   V+   F +P           +           QA   +   +  + 
Sbjct: 1   MKRKKKIPTIIVLAVVTLIFILPAIGFSILNWGVLPPEKLTPLVIEQANKFIDAHLDCE- 59

Query: 53  GIKIHIL---PFPSVFFKDIRIDQKE-------------DGSFESKIEGLSMRAEFLPLL 96
            +++      P+  V   +  +                            ++  + L  L
Sbjct: 60  RVELTYFETYPYLGVKLTNGHLISHAAEDSTAHEEELAIPSDSLLAFSRATLSLQPLDYL 119

Query: 97  SG-EIRVFDMYIDQPHLNFYLSSKGVSNWF---------QRKSTMDMIHNVILEKIHVKG 146
            G +I + D  I+ P    +++  G +NW          +  +    +  + L+K+ + G
Sbjct: 120 FGGKITIKDFSIENPRFYGFVNKDGHANWDIYESETDSTEANAGKKPLPPIDLQKVRIYG 179

Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKI 206
           G     D+++D    +    +++        + L  ++   S++            + ++
Sbjct: 180 GHFTYDDRQTDLFTEIGGFFVRLDGSLAGGANTLDFETGCSSLLFSNPTYTLKNDLSLRL 239

Query: 207 TANFPAKNKAISLKI---QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL-- 261
            +         S+ +   +L     P   D     F  +++        +       L  
Sbjct: 240 KSRLVLAEHYNSITLKDAELMVNNLPFTADGAIRHFPEDQRTRIDMDMGLKISDMNDLLK 299

Query: 262 ----------NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE 311
                     +  L+     + G+     G+  I    L   + N S    +     +  
Sbjct: 300 FIPDAYFQNRDKTLAEGSILVEGSIHGFLGDSIIPNVNLCCKIENGSYHIKD----IKQG 355

Query: 312 ENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371
            + L    +         ++ F   E+   K  +   D      N  +        + + 
Sbjct: 356 IDTLEMDLDI-HLNGPFPDSSFVSLEQLTMKGLNTSLDMQAKVTNLFKNPSVRAGMKGKV 414

Query: 372 NFS 374
           +F+
Sbjct: 415 DFT 417


>gi|298376298|ref|ZP_06986254.1| outer membrane assembly protein [Bacteroides sp. 3_1_19]
 gi|298267335|gb|EFI08992.1| outer membrane assembly protein [Bacteroides sp. 3_1_19]
          Length = 1099

 Score = 66.1 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/335 (11%), Positives = 97/335 (28%), Gaps = 42/335 (12%)

Query: 10  GFLFSVVLVGAFTVPL-FIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL---PFPSVF 65
           G  F + L+G   +    +           +    +   +  +  +++      P+  V 
Sbjct: 19  GIFFILPLIGVGILKWAVLPPEKLTPLVVEKTNEFIEAHLECE-RVELTYFETYPYLGVK 77

Query: 66  FKDIRIDQK-------------EDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPH 111
             + R+                         +   +       L SG++ +  + +D   
Sbjct: 78  LTNGRLISHLAEDSIGYQEDLMIPSDSLLSFKKAIVVFNPTDYLFSGKVTIPRVIMDSIR 137

Query: 112 LNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
              Y++ +G +NW   +S MD         +  + L+++H+  G     D++ D    + 
Sbjct: 138 FYGYVNEEGKANWEIYQSEMDSVDESSSSPLPKIDLQQVHITNGHFVYDDRQQDLYTAID 197

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL---K 220
              L I        + L +++   S++          + A +        +    +    
Sbjct: 198 GFFLHIDGLLTQRGNKLDVETGSSSIVFRSPSYSLANKLALRFKGRLLLADGLRRIGLRD 257

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL------------NLELSAK 268
            +L     P   D F      +        F +       L            +  L+  
Sbjct: 258 AELLVNNLPFTADGFMVPATEDNPSRIDMTFGLKVSDMNDLLHFIPDEYFKDRDKTLAEG 317

Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
           +  L G+ +   G+  +    L   + + S     
Sbjct: 318 RIILEGDIRGELGDSIVPTVNLCCKIEDGSYHVKG 352


>gi|253564362|ref|ZP_04841819.1| outer membrane assembly protein [Bacteroides sp. 3_2_5]
 gi|251948138|gb|EES88420.1| outer membrane assembly protein [Bacteroides sp. 3_2_5]
 gi|301161358|emb|CBW20898.1| putative exported protein [Bacteroides fragilis 638R]
          Length = 988

 Score = 66.1 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 42/341 (12%), Positives = 108/341 (31%), Gaps = 41/341 (12%)

Query: 3   RRVLIGLGFLFSVVL-----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++ L   G     VL       AF +   +            A   +   + ++  +++ 
Sbjct: 6   KKTLKISGITLGTVLLVLLVAIAFVINFIVTPKKLTPVVLDAANQTLNAHLDME-SVELT 64

Query: 58  I---LPFPSVFFKDIRIDQKE-------DGSFESKIEGLSMRAEFLPLLS-GEIRVFDMY 106
                P   +  K+  +  K                +   +    +  L+   I V ++ 
Sbjct: 65  FFSTFPQFGLKVKNGSLVSKALNDSSWCKTDSLLSFKECVLTVNPIAYLTENRIVVHNLS 124

Query: 107 IDQPHLNFYLSSKGVSNWFQRKSTMDMIH----------NVILEKIHVKGGRIKIIDQES 156
           +++  +  Y +  G +NW   ++++D I            + +  I +K   +   D+ +
Sbjct: 125 LEEVAVYAYRNKTGKANWEVTRASVDTIPADTASTDFNSEIDIRNIELKHANLVFDDRNT 184

Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216
           D    + D NL++       IS L +     +++    G     + A  +  +     + 
Sbjct: 185 DIYSRIDDANLKLRLSLTKGISTLGLKFDNKNILFWQQGELLVNKIATSLRTDIMVDRQT 244

Query: 217 ISLKI-QLFPLAYPIIIDLFGNLFWNEKQPIY--SGVFSVAGDFSKL----------LNL 263
              K+         I +D+ G    +           + +     +            + 
Sbjct: 245 AVWKLKDTELDVNGIRLDVNGAFRRDTVAKTIGMDLEYGLHAPSMETVLRMIPKSYVKDS 304

Query: 264 ELSA-KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
           ++SA  +  +SG  +   G+ ++    L+  +  +S     
Sbjct: 305 KVSAKGEVTVSGRVRGVYGDKKLPAVSLKIGIKEASAQYKG 345


>gi|94268152|ref|ZP_01291103.1| hypothetical protein MldDRAFT_2692 [delta proteobacterium MLMS-1]
 gi|93451710|gb|EAT02483.1| hypothetical protein MldDRAFT_2692 [delta proteobacterium MLMS-1]
          Length = 625

 Score = 66.1 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 81/281 (28%), Gaps = 42/281 (14%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV-FFKD----IRI 71
           L+ A   P                +  + + + +    +    P   V    +     R+
Sbjct: 145 LLTALLAPRL---------LADYFSRQLERPVTIA---RADWQPVNRVLTLHNGIVGPRL 192

Query: 72  DQKEDG-SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
           D  +D          L  R     L  G      + ++QP ++ +    G  N       
Sbjct: 193 DNPDDRIDPLLSFRTLQARIRPGNLWHGGPLFKTLRLEQPFIHLHRDRTGHYNLAPDLFL 252

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESD----QVYFLSDLNLQISARFLNIISPLSIDSIK 186
           +        + + ++ GR+   D            + ++N Q+                +
Sbjct: 253 LGGRLP---DPVEIRDGRLFYSDHRGGDDRRYQVEIREINGQLQPIASRG------SGSR 303

Query: 187 GSVIAEGTG-NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
            ++   G G      +   ++TA        + L      + +  + +L   L       
Sbjct: 304 VALELGGIGPEAAGVKLRGELTAGRSGAEDQLQL-----VVNHWPLAELAPYLQPLLGHT 358

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
           I +G+  +   F+     EL  +K       ++++  +   
Sbjct: 359 IAAGLLDMQASFTPGPGTELHVRK-----QLQLTNLRLTSP 394


>gi|60679838|ref|YP_209982.1| hypothetical protein BF0245 [Bacteroides fragilis NCTC 9343]
 gi|60491272|emb|CAH06020.1| putative exported protein [Bacteroides fragilis NCTC 9343]
          Length = 988

 Score = 66.1 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 88/287 (30%), Gaps = 30/287 (10%)

Query: 3   RRVLIGLGFLFSVVL-----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++ L   G     VL       AF +   +            A   +   + ++  +++ 
Sbjct: 6   KKTLKISGITLGTVLLVLLVAIAFVINFIVTPKKLTPVVLDAANQTLNAHLDME-SVELT 64

Query: 58  I---LPFPSVFFKDIRIDQKE-------DGSFESKIEGLSMRAEFLPLLS-GEIRVFDMY 106
                P   +  K+  +  K                +   +    +  L+   I V ++ 
Sbjct: 65  FFSTFPQFGLKVKNGSLVSKALNDSSWCKTDSLLSFKECVLTVNPIAYLTENRIVVHNLS 124

Query: 107 IDQPHLNFYLSSKGVSNWFQRKSTMDMIH----------NVILEKIHVKGGRIKIIDQES 156
           +++  +  Y +  G +NW   +++ D I            + +  I +K   +   D+ +
Sbjct: 125 LEEVAVYAYRNKAGKANWEVTRASADTIPADTASTDFNSEIDIRNIELKHANLVFDDRNT 184

Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216
           D    + D NL++       IS L +     +++    G     + A  +  +     + 
Sbjct: 185 DIYSRIDDANLKLRLSLTKGISTLGLKFDNKNILFWQQGELLVNKIATSLRTDIMVDRQT 244

Query: 217 ISLKI-QLFPLAYPIIIDLFGNLFWNEKQPIY--SGVFSVAGDFSKL 260
              K+         I +D+ G    +           + +     + 
Sbjct: 245 AVWKLKDTELDVNGIRLDVNGTFRRDTVAKTIGMDLEYGLHAPSMET 291


>gi|265764970|ref|ZP_06093245.1| outer membrane assembly protein [Bacteroides sp. 2_1_16]
 gi|263254354|gb|EEZ25788.1| outer membrane assembly protein [Bacteroides sp. 2_1_16]
          Length = 988

 Score = 66.1 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 41/341 (12%), Positives = 107/341 (31%), Gaps = 41/341 (12%)

Query: 3   RRVLIGLGFLFSVVL-----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++ L   G     VL       AF +   +            A   +   + ++  +++ 
Sbjct: 6   KKTLKISGITLGTVLLVLLVAIAFVINFIVTPKKLTPVVLDAANQTLNAHLDME-SVELT 64

Query: 58  I---LPFPSVFFKDIRIDQKE-------DGSFESKIEGLSMRAEFLPLLS-GEIRVFDMY 106
                P   +  K+  +  K                +   +    +  L+   I V ++ 
Sbjct: 65  FFSTFPQFGLKVKNGSLVSKALNDSSWCKIDSLLSFKECVLTVNPIAYLTENRIVVHNLS 124

Query: 107 IDQPHLNFYLSSKGVSNWFQRKSTMDMIH----------NVILEKIHVKGGRIKIIDQES 156
           +++  +  Y +  G +NW   +++ D I            + +  I +K   +   D+ +
Sbjct: 125 LEEVAVYAYRNKAGKANWEVTRASTDTIPADTASTDFNSEIDIRNIELKHANLVFDDRNT 184

Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216
           D    + D NL++       +S L +     +++    G     + A  +  +     + 
Sbjct: 185 DIYSRIDDANLKLRLSLTKGVSTLGLKFDNKNILFWQQGELLVNKIATSLRTDIMVDRQT 244

Query: 217 ISLKI-QLFPLAYPIIIDLFGNLFWNEKQPIY--SGVFSVAGDFSKL----------LNL 263
              K+         I +D+ G    +           + +     +            + 
Sbjct: 245 AVWKLKDTELDVNGIRLDVNGAFRRDTVAKTIGMDLEYGLHAPSMETVLRMIPKSYVKDS 304

Query: 264 ELSA-KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
           ++SA  +  +SG  +   G+ ++    L+  +  +S     
Sbjct: 305 KVSAKGEVTVSGRVRGVYGDKKLPAVSLKIGIKEASAQYKG 345


>gi|332558410|ref|ZP_08412732.1| hypothetical protein RSWS8N_05125 [Rhodobacter sphaeroides WS8N]
 gi|332276122|gb|EGJ21437.1| hypothetical protein RSWS8N_05125 [Rhodobacter sphaeroides WS8N]
          Length = 1094

 Score = 66.1 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 29/322 (9%), Positives = 77/322 (23%), Gaps = 31/322 (9%)

Query: 16  VLVGAFTVPLFIDWTDFREDFERQATLIVG--KKIAVKG-GIKIHILPFPSVFFKDIRID 72
               AFT            + E +    +     +++ G  + +     P +   D+R+ 
Sbjct: 38  FATLAFTGRPLPLPGWAVTEAETRINRALEPALSVSLGGLVLTVEPNWIPRLRLDDVRLR 97

Query: 73  QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST-- 130
           Q +       +    +  +    L G +    + +    ++    + G  ++   +    
Sbjct: 98  QADG-RTLVTLPEARVVFDRGAALRGALHPKTITLSGARISLRRLADGRFDFAMGEQGGT 156

Query: 131 ----------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                                   L +I  +G  + + D+ + + +   D  L +     
Sbjct: 157 FRIASYAELRETVDRLFAQPVLADLRRIEAEGTTLTLDDRRAGRTWQAGDGRLTLVNGPD 216

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK---------IQLFP 225
                + +  +     A          +     A   A    ++             L  
Sbjct: 217 RRALEIGLTLLNSKGRAPAQALVTFVTTPGSPEARISATVDHVAAADIAAQAAPVAWLEV 276

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
           L   +       L    +               +           R    F    G  R+
Sbjct: 277 LDAALSGRFSAALDGEGRLTRLEAGLDSGEGALQPRPETRPIAFDRAGLAFAYDPGRERL 336

Query: 286 SRYKLQSILPNSSTDEDNKTKV 307
           +  +L+    +          +
Sbjct: 337 NLTRLEVQGRSIRLSAQGHAYL 358


>gi|330959314|gb|EGH59574.1| hypothetical protein PMA4326_12234 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 356

 Score = 66.1 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/333 (9%), Positives = 93/333 (27%), Gaps = 27/333 (8%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65
           L  L  L  +++     +P  +     R+    +   +   +  +   + + +    +  
Sbjct: 9   LWTLAALVVLLIALNIALPYLV-----RDYLNDKLADMGDYRGQIT-DVDLALWRG-AYR 61

Query: 66  FKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
            K ++I + +            + +   +  L +    V +     P +NF     G +N
Sbjct: 62  IKGLKIVKTDGKVPVPFVDAPMIELAVSWKSLWNDHAVVAEALFTDPQINFV---DGGNN 118

Query: 124 WFQRKSTMDMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
               ++               + L ++ +  G+I   +  S     +    +  S   L 
Sbjct: 119 RQASQTGQGTDWRTQLNKLLPITLNELRISNGKITFNNFSSTPKVTIDADQVNASFYNLT 178

Query: 176 IISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
            +  +  +        +G                +  +  +    +++   +    + D 
Sbjct: 179 NVVDVEGNRDA---EFKGKARLLGHASLESTAKFDPFSNFEDFDFRLRATGIQLKKLNDF 235

Query: 235 F---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
               G   +N                       L       +    + + +  + R   +
Sbjct: 236 SSAYGKFDFNAGNGDIVIEAQANKGQLSGYIKPLLRNVDVFNWQQDVENKDKGLFRSVWE 295

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
           +++  S T   N+ +        L+ + +  + 
Sbjct: 296 ALVGTSETVLKNQRENQFATRVDLSGNVHQQDI 328


>gi|239996883|ref|ZP_04717407.1| hypothetical protein AmacA2_20748 [Alteromonas macleodii ATCC
           27126]
          Length = 1151

 Score = 66.1 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/412 (10%), Positives = 109/412 (26%), Gaps = 58/412 (14%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFK 67
           L     ++ +    +   +     +           G+  AV+    I I PF   +   
Sbjct: 13  LSTYLVLIYLTYALLIGVVTPAVLKAKLPNIVKENTGRDAAVE---DIAINPFLLKIEVT 69

Query: 68  DIRIDQK--------------EDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHL 112
           +  I                    +    +  +S+   F   L +    V  + ID+P +
Sbjct: 70  NFVIYPNIHSSNESEDNAVIQNQENHFFSVGNVSLDVGFWQSLFTFTPAVESLTIDEPFV 129

Query: 113 NFYLSSKGVSNW--------------------FQRKSTMDMIHNVILEKIHVKGGRIKII 152
           +    S+                             ++   I  + L    +  GR+ I 
Sbjct: 130 SIARLSESEDTQIFNFSDILTHVEKRSTKAPEEPNDTSEGQIPRITLRDFALNEGRVVIE 189

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212
           D+ ++ +    +L++ +     + +   S    K +            +           
Sbjct: 190 DKVTNTLLDYPELSVDLQDLDTHALISSSSVGNKNANPKSDKSESAQSKGKLAFNQYQFN 249

Query: 213 KNKAISLKIQLFP--LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270
              A    I +       P+ +     +      P++S    +         + LS    
Sbjct: 250 LLTAEKGNIAIDGEFQLSPLKVTTDITINDVALTPLWSLSKDLIEADLVDGKINLSLHAE 309

Query: 271 RLSGN----FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
               +    F +  G   ++     +    + T    K+                    H
Sbjct: 310 VFEQDTAFQFILERGEFGVNNLVFNADSSPA-TTGTAKSSQEIIAIPAFAI--------H 360

Query: 327 DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378
           D+N        E++    ++  D+++ S    +   +       ++ + D  
Sbjct: 361 DIN----VNALEQQVSIAEVAFDNVRVSGLFDKSGLDLQRLFTPKSPAADAT 408


>gi|154492080|ref|ZP_02031706.1| hypothetical protein PARMER_01711 [Parabacteroides merdae ATCC
           43184]
 gi|154087866|gb|EDN86911.1| hypothetical protein PARMER_01711 [Parabacteroides merdae ATCC
           43184]
          Length = 1538

 Score = 66.1 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/379 (11%), Positives = 111/379 (29%), Gaps = 43/379 (11%)

Query: 2   LRRVLIGLGF--LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           ++R+ I      +  +++     +P F             A+   G  I + G I++   
Sbjct: 1   MKRIGIICLIPMVLVILISILLYIPPF--QNFAVRLATEYASETTGMNIRI-GQIRLSF- 56

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
              ++  +D+++    D      +E   +    LPLL  E+ V  + +     N     +
Sbjct: 57  -PLNLTIRDVKVITPPD--TLLSLESFQVNIRPLPLLKKEVLVDAIDLRGVKANTGNLIE 113

Query: 120 GVSN-------WFQRKSTMDMIHNVILEKIHVKGGRIKII-----------DQESDQVYF 161
           G+         + +            L KI +    I ++               +    
Sbjct: 114 GMEIKGTLGKLYAKADRIDLGKEIARLNKIDLSDTAITLLMNDTTTNKDTTSTAVNWKLM 173

Query: 162 LSDLNL-------QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214
           L  ++L       QI    L + + +    +   ++  G+  +   +     ++     +
Sbjct: 174 LDQIDLDRVAFAMQIPGDSLRLSTYIEKAGLTDGIVDLGSARYSASQFLLSGSSLNYDGS 233

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274
            +  +     P   P  I L  ++       +Y G    A       N       S L+G
Sbjct: 234 YSDPV-----PGFDPAHIALN-DVNIRIDSLLYGGRDISARIKKFSANDRSGLTLSSLTG 287

Query: 275 NFKISDGNVRISRYKLQSILPNSSTDED---NKTKVSQDEENLLNFSENGAESMHDLNET 331
           +       +++    L++             N    +         + +  +    +   
Sbjct: 288 DISSDSTTIQVPGLLLKTPYSEIRLLATVPWNTFDNTPSGTLHSLLTASVGKEDVFIFAG 347

Query: 332 DFFEEEEKKNKNDDLKKDD 350
              +E ++     ++    
Sbjct: 348 PLPKEFKQAYPQKEISLTA 366


>gi|254786620|ref|YP_003074049.1| AsmA family protein [Teredinibacter turnerae T7901]
 gi|237686155|gb|ACR13419.1| AsmA family protein [Teredinibacter turnerae T7901]
          Length = 731

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/346 (9%), Positives = 96/346 (27%), Gaps = 52/346 (15%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI---DQKEDGSFESKIE 84
           +    +   E+      G    + G +   + P   V   +I++     + D    + I+
Sbjct: 34  NANFLKPKLEKALAEQ-GVFTEILGDLNWSVYPVAGVKSGEIQLFPSAARVDTEKLASID 92

Query: 85  GLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----------------- 126
             +++ + L L+   E+R+  +++  P ++ ++   G SNW                   
Sbjct: 93  SFNLQLDLLALIRERELRINAVFVQHPKVDLHIGKNGESNWQPVLDAFARDSDTDTDTEG 152

Query: 127 --------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                           ++      + +E+I +    +   +  ++    L   ++Q+ A 
Sbjct: 153 GEPAKRAPAEPEKASDNSNASDTQIAIERIKISDFELSYTNAVNNSNIKLRQTDVQLDAV 212

Query: 173 FLNIIS------PLSIDSIKGSVIAEGTGNFDNK---RSAFKIT--ANFPAKNKAISLKI 221
            LN              +    +                 F  T  +    +     +  
Sbjct: 213 NLNGQPMQIALNSELTFAPYPPIRIGFESTITQTGAGAITFASTRLSAMATEEADARING 272

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281
            +  +  P  +     +  +E  P     +         ++   +  K   + N +    
Sbjct: 273 NISVVTSPA-LKAEATIQLDELNPAAWLKW--MEVALPEMSNSSALTKFAANANIQYRGD 329

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
            + ++             D      +  +    L  +    +   D
Sbjct: 330 QLEVAVLSATLDKT--KLDAKGTVSLQPELPPKLQLTLAVDQLNLD 373


>gi|121611733|ref|YP_999540.1| hypothetical protein Veis_4831 [Verminephrobacter eiseniae EF01-2]
 gi|121556373|gb|ABM60522.1| conserved hypothetical protein [Verminephrobacter eiseniae EF01-2]
          Length = 1420

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 80/300 (26%), Gaps = 34/300 (11%)

Query: 4   RVLIGLGFLF-------------SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAV 50
           R+L  +  L                ++ G     +     DFR   E  A   +G  + +
Sbjct: 11  RLLKTVAGLARWSLRLLLAFWLLLAIIWGVLHGAIVPRIGDFRPQLEAYAARTLGVAVRI 70

Query: 51  KGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110
                       S+   D+ +          ++  + +      LL   +    ++ID+P
Sbjct: 71  GAVAAATEGLVLSIGLSDVTLLDAAG-RPALRLPRVVLALSARSLLDAGVE--QLFIDRP 127

Query: 111 HLNFYLSSKGVSNWFQRKSTMDMI-------HNVILEKIHVKGGRIKIIDQE-SDQVYFL 162
            L    +S G       +   D               ++ ++GG ++  D++    V  L
Sbjct: 128 ELEIRRTSDGRIQVAGLEFAHDGSGRSAAADWLFAQREVFIQGGTVRWSDEQRQAPVLAL 187

Query: 163 SDLNLQISARFLNIISPLSIDSIKGS-VIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221
           S ++L +       +  L               G         + +       +  +   
Sbjct: 188 SQVDLVLRNGNWQHLMRLDATPPPAWGDRFTLVGRLRASLLHARDSNWRFWNGQLFADFA 247

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIY-------SGVFSVAGDFSKLLNL--ELSAKKSRL 272
           ++         DL  N+     +           G          L ++   L      L
Sbjct: 248 RVDVSQLRHHADLGANVEVARGRGALRAWADVRDGQIVGGTADLALADVATTLGPGLPAL 307


>gi|77457639|ref|YP_347144.1| hypothetical protein Pfl01_1412 [Pseudomonas fluorescens Pf0-1]
 gi|77381642|gb|ABA73155.1| putative membrane protein [Pseudomonas fluorescens Pf0-1]
          Length = 358

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/362 (9%), Positives = 100/362 (27%), Gaps = 21/362 (5%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R  L  +     +++     +P  +      +    +   +   +  +   + + +    
Sbjct: 6   RWPLWTIATAVVLLIALHIALPYLV-----HDYLNDKLANMGDYRGQIT-DVDLALWRG- 58

Query: 63  SVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           +     ++I + +            + +   +  L      V  +   +P +NF      
Sbjct: 59  AYKINGLKIVKADGKVPVPFVDAPVIDLSVSWHSLWYDHAVVAQVKFFKPQVNFVDGGAN 118

Query: 121 VSNWFQRKSTM-----DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
             N    + T        +  + L+++ +  GRI   +  S     ++  N+  S   L 
Sbjct: 119 KQNSQTGQGTDWREQLGKLLPITLDEVQISDGRISFRNFNSKPPVNMNATNVDASIYNLT 178

Query: 176 IISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
            +              EG              T +  +  +    +++   +    + D 
Sbjct: 179 NVVDKEGKRDA---RFEGKALLLGHAPLETTATFDPLSNFEDFEFRLRARDIELKRMNDF 235

Query: 235 F---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
               G   +N  +       +      K     L       + +  + + N  I R   +
Sbjct: 236 ASAYGKFDFNAGRGDVVIEAAANKGQLKGYIKPLLRDVDVFNWHQDVENKNKGIFRSIWE 295

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
           +++  + T   N+ K        L+ S +  +                +  N   ++   
Sbjct: 296 ALVGGTETVLKNQGKNQFATRVELSGSVHQQDINAFEAFLQILRNGFIQAFNARYERPKP 355

Query: 352 QY 353
             
Sbjct: 356 DA 357


>gi|53711587|ref|YP_097579.1| outer membrane assembly protein [Bacteroides fragilis YCH46]
 gi|52214452|dbj|BAD47045.1| outer membrane assembly protein [Bacteroides fragilis YCH46]
          Length = 988

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 88/287 (30%), Gaps = 30/287 (10%)

Query: 3   RRVLIGLGFLFSVVL-----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++ L   G     VL       AF +   +            A   +   + ++  +++ 
Sbjct: 6   KKTLKISGITLGTVLLVLLVAIAFVINFIVTPKKLTPVVLDAANQTLNAHLDME-SVELT 64

Query: 58  I---LPFPSVFFKDIRIDQKE-------DGSFESKIEGLSMRAEFLPLLS-GEIRVFDMY 106
                P   +  K+  +  K                +   +    +  L+   I V ++ 
Sbjct: 65  FFSTFPQFGLKVKNGSLVSKALNDSSWCKTDSLLSFKECVLTVNPIAYLTENRIVVHNLS 124

Query: 107 IDQPHLNFYLSSKGVSNWFQRKSTMDMIH----------NVILEKIHVKGGRIKIIDQES 156
           +++  +  Y +  G +NW   +++ D I            + +  I +K   +   D+ +
Sbjct: 125 LEEVAVYAYRNKAGKANWEVTRASADTIPADTASTDFNSEIDIRNIELKHANLVFDDRNT 184

Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216
           D    + D NL++       IS L +     +++    G     + A  +  +     + 
Sbjct: 185 DIYSRIDDANLKLRLSLTKGISTLGLKFDNKNILFWQQGELLVNKIATSLRTDIMVDRQT 244

Query: 217 ISLKI-QLFPLAYPIIIDLFGNLFWNEKQPIY--SGVFSVAGDFSKL 260
              K+         I +D+ G    +           + +     + 
Sbjct: 245 AVWKLKDTELDVNGIRLDVNGAFRRDTVAKTIGMDLEYGLHAPSMET 291


>gi|259418692|ref|ZP_05742609.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
 gi|259344914|gb|EEW56768.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
          Length = 1173

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 91/309 (29%), Gaps = 32/309 (10%)

Query: 29  WTDFREDFERQATLIVGKKIAVK-GGIK--IHILPFPSVFFKDIRIDQKEDGSFESKIEG 85
               R + ER+    +G  + ++ G I+  +H    P +  +D+ +   +       +E 
Sbjct: 97  PQWLRAEAERRIERHLGG-LQIEFGEIELVVHSGWRPRLSLRDVTLFYPDGS-PAVHLED 154

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG-------------VSNWFQRKSTMD 132
                   PLL G++R   + +            G                    +    
Sbjct: 155 AQAALAMRPLLRGQLRPKLISLSGLFATLETGRDGAVALSFSDGATPLRQARNLPQLIDT 214

Query: 133 MIHNVIL------EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186
               + L       ++  +   +  ID+  D+ + L    + +S    ++        + 
Sbjct: 215 WDRQLELPILSAVTRVETQSVTLNYIDRRIDRAWTLDGGAVLLSREGDSVNIDAGFSVLS 274

Query: 187 G-----SVIAEGTGNFDNKRSAFKITANF-PAKNKAISLKI--QLFPLAYPIIIDLFGNL 238
           G     +V A    +  +  + F +  +  P+ + A        L  L  PI   L G +
Sbjct: 275 GREYASTVDANYRSDIGDTAAEFAVVVDQVPSVDIASQSPAFGWLDVLRAPISGALRGAV 334

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
             + K    +    +     +  +             F        ++  +L       S
Sbjct: 335 DSDGKLLPLTASLEIGTGVIQPNDQLKPVPLQSAQSFFTFDPARQELAFTRLSVESGWVS 394

Query: 299 TDEDNKTKV 307
              + + ++
Sbjct: 395 GQMEGRAEL 403


>gi|256841548|ref|ZP_05547055.1| outer membrane assembly protein [Parabacteroides sp. D13]
 gi|256737391|gb|EEU50718.1| outer membrane assembly protein [Parabacteroides sp. D13]
          Length = 1099

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/335 (11%), Positives = 97/335 (28%), Gaps = 42/335 (12%)

Query: 10  GFLFSVVLVGAFTVPL-FIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL---PFPSVF 65
           G  F + L+G   +    +           +    +   +  +  +++      P+  V 
Sbjct: 19  GIFFILPLIGGGILKWAVLPPEKLTPLVVEKTNEFIEAHLECE-RVELTYFETYPYLGVK 77

Query: 66  FKDIRIDQK-------------EDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPH 111
             + R+                         +   +       L SG++ +  + +D   
Sbjct: 78  LTNGRLISHLAEDSIGYQEDLMIPSDSLLSFKKAIVVFNPTDYLFSGKVTIPRVIMDSIR 137

Query: 112 LNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
              Y++ +G +NW   +S MD         +  + L+++H+  G     D++ D    + 
Sbjct: 138 FYGYVNEEGKANWEIYQSEMDSVDESSSSPLPKIDLQQVHITNGHFVYDDRQQDLYTAID 197

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL---K 220
              L I        + L +++   S++          + A +        +    +    
Sbjct: 198 GFFLHIDGLLTQRGNKLDVETGSSSIVFRSPSYSLANKLALRFKGRLLLADGLRRIGLRD 257

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL------------NLELSAK 268
            +L     P   D F      +        F +       L            +  L+  
Sbjct: 258 AELLVNNLPFTADGFMVPATEDNPSRIDMTFGLKVSDMNDLLHFIPDEYFKDRDKTLAEG 317

Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
           +  L G+ +   G+  +    L   + + S     
Sbjct: 318 RIILEGDIRGELGDSIVPTVNLCCKIEDGSYHVKG 352


>gi|225872277|ref|YP_002753732.1| hypothetical protein ACP_0604 [Acidobacterium capsulatum ATCC
           51196]
 gi|225793859|gb|ACO33949.1| conserved domain protein [Acidobacterium capsulatum ATCC 51196]
          Length = 1388

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/288 (9%), Positives = 73/288 (25%), Gaps = 12/288 (4%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDF----REDFERQATLIVGKKIAVKGGIKIHILPFPS 63
               +  ++L+    V  +     F    R     Q     G ++ + G     +     
Sbjct: 30  IGAGVVLLLLIAVSAVLWYATTPQFEQRVRTVVISQLERTTGGRVEL-GAFHWQLA-KMG 87

Query: 64  VFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
              +++ I   +         ++ L +  + + LL  +I +  +   +P  +  +   G 
Sbjct: 88  FVAENLTIHGKEGPGQLPFLHVDELVVHLKVIDLLGAKIGLSYLGAQRPVFHLIVYPDGS 147

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           +N    K       + + E   +   + ++ D            +L       +++    
Sbjct: 148 TNAPSPKVKQKSKTSAVDEVFSLAIDQTQLNDGLLLINEKKIPFSLDARHVGADVLFDRR 207

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII-IDLFGNL-- 238
                G + A          +                ++I+          + + G +  
Sbjct: 208 RHDYAGKIKASDIVLQRGTANPVHSKLMLEVNAWRKHIQIKNLVFTSGDSHLQITGTVTN 267

Query: 239 -FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                      G   +           +     RL         N  +
Sbjct: 268 YAHPHLAVTADGQIDLRVLEPLTGTRGIRKGVLRLKAQGNGDAQNFAL 315


>gi|296104959|ref|YP_003615105.1| hypothetical protein ECL_04628 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295059418|gb|ADF64156.1| hypothetical protein ECL_04628 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 1266

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/319 (12%), Positives = 93/319 (29%), Gaps = 26/319 (8%)

Query: 2   LRRV---LIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56
           +RR+   L+  G    V++    +    +      +R     +     G  + V   +  
Sbjct: 1   MRRLPGILLLTGATLVVIVALLVSGLRLVLPHLDSWRPQVLAKIESATGVPVDVSQ-VSA 59

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++  +DI    K+ G    KI+ +++  +    LL    +  D+   Q     
Sbjct: 60  SWQNFGPTLDARDISASLKDGG--YLKIKRVTLALDVWQSLLHMRWQFRDLTFYQLQFLT 117

Query: 115 YLSSKGVSNWFQRKSTMDMIHNVI-LEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
                G  N    ++       +   +   ++   +  I     +       L+ LN + 
Sbjct: 118 NTPLSGGDNTQSLEANRLSDLFLRQFDHFDLRDSEVSFITLSGQRAELKIPQLTWLNGKE 177

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGN-FDNKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R    ++  S++   G +         D   +  K+       +    L   +Q    
Sbjct: 178 RHRAEGQVNLSSLNGQHGVMQVRMDLRDDDGLLNNGKVWLQADDVDVKPWLGDWLQQNMQ 237

Query: 227 AYPIIIDLFGNLFWNEK-QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +   +             G   +  + +       L+ +     G  + 
Sbjct: 238 LETARFSLEGWMTLTKGVFASGDIWLKQGGASWQGESKQHQLSVDNLTAHVTKEKGGWQF 297

Query: 286 SRYKLQSILPNSSTDEDNK 304
           +       +P++    D K
Sbjct: 298 A-------IPDTRITMDGK 309


>gi|126668767|ref|ZP_01739715.1| predicted membrane protein [Marinobacter sp. ELB17]
 gi|126626750|gb|EAZ97399.1| predicted membrane protein [Marinobacter sp. ELB17]
          Length = 1244

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/260 (10%), Positives = 67/260 (25%), Gaps = 19/260 (7%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGL 86
           D   +R+  + Q +  +G  +++   +        P    KD+ + +       + +  L
Sbjct: 50  DMNQYRDTLQAQLSEQLGYTVSIA-ELSARWYWLNPEFSAKDVMVTETGPDEPLAYLRHL 108

Query: 87  SMRAE-FLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH---------- 135
            MR +    +L   + +     D   L     + G          +              
Sbjct: 109 RMRVDFLASVLRLRLVLEKFEADGLDLALRQKAAGQVVLAGSGLEVSDNSLQRLVALAER 168

Query: 136 NVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
            +    + +   ++ + D   + +   +  L+L                     +    +
Sbjct: 169 WLSKPFVRITRIQLAVTDSSGNLRQLDIPQLDLLYQRGLFRASGRAMQAGTNQQL---AS 225

Query: 195 GNFDNKRSAF-KITANFPAKNKAISLKIQLFPLAYPIIIDLFG-NLFWNEKQPIYSGVFS 252
                +R    + T        +  L   L        + + G ++          G   
Sbjct: 226 FRLVGRRFLLGQFTGQLYVDVASGRLFDGLIDDYRWRDMRVEGFDVGGQAWLSFRDGQLE 285

Query: 253 VAGDFSKLLNLELSAKKSRL 272
                 +   L+L      L
Sbjct: 286 QVNGTLRTPYLQLGVGAMSL 305


>gi|121606785|ref|YP_984114.1| hypothetical protein Pnap_3897 [Polaromonas naphthalenivorans CJ2]
 gi|120595754|gb|ABM39193.1| conserved hypothetical protein [Polaromonas naphthalenivorans CJ2]
          Length = 1379

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/395 (9%), Positives = 102/395 (25%), Gaps = 29/395 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           LR +L  +   + +  +    +  +I     +FR   E QA+  +G  + +         
Sbjct: 26  LRGLLWLVASAWLLFGLSWLVLHGWIVPRIAEFRPRLEAQASRALGVPVRIGQITGRSEG 85

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             PS    D+ +   +      ++  +        L    +    + ID+P ++   ++ 
Sbjct: 86  AIPSFELHDVSLLDAQG-REAVRLPHILGALSPSSLW--GLGFEQLVIDRPEVDIRRAAD 142

Query: 120 GVSNW--------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQIS 170
           G                 +          +  V+GG ++  D+        LS ++  + 
Sbjct: 143 GKIFVGGLEVSKDSDTGHSAMADWLFSQTEFIVRGGTVRWTDEMRQAPPLALSQVDGVMR 202

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDN---KRSAFKITANFPAKNKAISLKIQLFPLA 227
                 +  L               +      +    + T +F A    +        ++
Sbjct: 203 NGHRRHLMRLDAT---PPPEWGERFSLRGIFRQPLLSRRTGDFAAWTGQVYGDFSHVDVS 259

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
                    +L         +    +     K+    +      +          +    
Sbjct: 260 RIQRHASLESLGLALNGGQGALRAWLDVGKGKVTGALVDVALRDVDARLGSRLEPLAFES 319

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347
              +               VS +         +G +               +  ++  LK
Sbjct: 320 LAGRMGAS----QHAGGFDVSTEGL-QFRLQ-DGLQWPGGNLALAHTRASRRGPEHTTLK 373

Query: 348 KDDIQYSVNKKEEKDNSHDKENQ---ENFSGDKMI 379
            D +  +   +       D   Q    +F+   ++
Sbjct: 374 ADRLDLAALARIASRLPLDNTAQALVASFAPQGLV 408


>gi|146313316|ref|YP_001178390.1| hypothetical protein Ent638_3682 [Enterobacter sp. 638]
 gi|145320192|gb|ABP62339.1| putative protease [Enterobacter sp. 638]
          Length = 1265

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/319 (12%), Positives = 92/319 (28%), Gaps = 25/319 (7%)

Query: 2   LRRV---LIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56
           +RR+   L+  G    V++    +    +      +R     +     G  + V   +  
Sbjct: 1   MRRLPGILLLTGATLVVIVALLVSGLRLVLPHLDSWRPQVLAKIERATGVPVDVS-QLSA 59

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
           +     P++  +DI     + G    KI+ +++  +    LL    +  D+   Q     
Sbjct: 60  NWQNFGPTLDARDINAALPDGG--YLKIKRVTLALDVWQSLLHMRWQFRDLTFYQLQFLT 117

Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQIS 170
               +   +     + +  +     +   ++   I  I     +       L+ LN +  
Sbjct: 118 NTPLRNSDSKGIETNRISDLFLRQFDHFDLRDSEISFITLSGQRAELAIPQLTWLNGKDR 177

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGN-FDNKRSAFKITANFPAKNKAISLK--IQLFPLA 227
            R    ++  S+    G +         +   ++ ++       +    L   +Q     
Sbjct: 178 HRAEGQVNLSSLTGQHGIMQVRMDLRDDNGLLNSGRVWLQADDVDVKPWLGKWMQDNVAL 237

Query: 228 YPIIIDLFGNLFWNEK-QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
                 L G L   +             G   K  N         L+ +      N + S
Sbjct: 238 QRARFSLEGWLTLTDGDIAAGDVWLKQGGAAWKGDNQSHDMSVDNLTAHVTRQGANWQFS 297

Query: 287 RYKLQSILPNSSTDEDNKT 305
                  +P++    D K 
Sbjct: 298 -------IPDTRITMDGKA 309


>gi|77463530|ref|YP_353034.1| hypothetical protein RSP_2972 [Rhodobacter sphaeroides 2.4.1]
 gi|77387948|gb|ABA79133.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
          Length = 1094

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/322 (8%), Positives = 76/322 (23%), Gaps = 31/322 (9%)

Query: 16  VLVGAFTVPLFIDWTDFREDFERQATLIVG--KKIAVKG-GIKIHILPFPSVFFKDIRID 72
               AFT            + E +    +     +++ G  + +     P +   D+R+ 
Sbjct: 38  FATLAFTGRPLPLPGWAVTEAETRINRALEPALSVSLGGLVLTVEPNWIPRLRLDDVRLR 97

Query: 73  QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST-- 130
           Q +       +    +  +    L G +    + +    +     + G  ++   +    
Sbjct: 98  QADG-RTLVTLPEARVVFDRGAALRGALHPKTITLSGARIALRRLADGRFDFAMGEQGGT 156

Query: 131 ----------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                                   L +I  +G  + + D+ + + +   D  L +     
Sbjct: 157 FRLASYAELRETVDRLFAQPVLADLRRIEAEGTTLTLDDRRAGRTWQAGDGRLTLVNGPD 216

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK---------IQLFP 225
                + +  +     A          +     A   A    ++             L  
Sbjct: 217 RRALEIGLTLLNSKGRAPAQALVTFVTTPGSPEARISATVDHVAAADIAAQAAPVAWLEV 276

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
           L   +       L    +               +           +    F    G  R+
Sbjct: 277 LDAALSGRFSAALDGEGRLTRLEAGLDSGEGALQPRPETRPIAFDKAGLAFAYDPGRERL 336

Query: 286 SRYKLQSILPNSSTDEDNKTKV 307
           +  +L+    +          +
Sbjct: 337 NLTRLEVQGRSIRLSAQGHAYL 358


>gi|262197794|ref|YP_003269003.1| glycosyl transferase family 51 [Haliangium ochraceum DSM 14365]
 gi|262081141|gb|ACY17110.1| glycosyl transferase family 51 [Haliangium ochraceum DSM 14365]
          Length = 749

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 96/309 (31%), Gaps = 35/309 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFID----WTDFREDFERQATLIVGKKIAVKGGIKIHI 58
           RR+L     +  +V + A    LF      W   +     +    +G+++AV   +++  
Sbjct: 9   RRLLRVCAIVLGLVGLLALAAWLFFPQIGAW-AVKSRGLPRLEAALGRELAVA-EVEVT- 65

Query: 59  LPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
                V  + I +    D      ++I  +++  +      G  R+    ID    +   
Sbjct: 66  --RSRVVLRGITVRGPADAEDRPLAQIARVAVDFDLWQAARGRPRLGAALIDGLGAHVVR 123

Query: 117 SSKGVSN--------------WFQRKSTMDMIHNVILE--KIHVKGGRIKIIDQESDQVY 160
            + G  N                  +  +D    V L    + +  G + + D+      
Sbjct: 124 HADGSDNVRDLLRRLREQGAAPQAGEGGVDTGAGVSLRPSSVTLTRGTLTVEDRGHGVEL 183

Query: 161 FLSDLN--LQISARFLNIISPLSIDSIKGSVIAEG-TGNFDNKRSAFKITANFPAKNKAI 217
            +  ++  L  +      +  ++IDS   + + +G   +     +    T + P +N  +
Sbjct: 184 TVGGVSAELDAAGALSAELDDIAIDSGAAAGVGDGPRLSAQVAHAVLTTTLDRPVENALV 243

Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
            ++           + L         +   +    +AG          S    +  G+  
Sbjct: 244 RIEDATATATARHSVTLSAVSGTLSPEGGSALALDLAGS-----YGGSSEPLWQARGSID 298

Query: 278 ISDGNVRIS 286
           ++     I 
Sbjct: 299 LATRQASID 307


>gi|26987674|ref|NP_743099.1| hypothetical protein PP_0938 [Pseudomonas putida KT2440]
 gi|24982359|gb|AAN66563.1|AE016285_1 conserved hypothetical protein [Pseudomonas putida KT2440]
          Length = 1273

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 102/295 (34%), Gaps = 19/295 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60
           R  +G+  L +V++    ++   +     ++R D E +A   +G  + V G ++ H    
Sbjct: 15  RWGLGICALLAVLVALYVSLGRELVPLVAEYRADVESKAEQALGLPVHV-GALEGHWSGL 73

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSK 119
            P +  +D+++ +   G+   +++ + +  +    L+  E+R+  + +    L    + +
Sbjct: 74  APVLRVRDLQLGE---GTKALRLDDVMVVPDIWASLTAREVRLARIQLGGLQLILRENEQ 130

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
           G  N        D   +       ++  GRI + D       +  D           + +
Sbjct: 131 GAWNLEGLPKKDDAPLDPADLLQRLRQLGRIDVFDSLVTLHPWQRD-----PLTLTYVSA 185

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKIT---ANFPAKNKAISLKIQLFPLAYPIIIDLF 235
            L   + + ++    T   D +  A  +    +    ++  +   + L    +   +   
Sbjct: 186 GLQAGAKRQALDLRATLP-DGQPLALSLNSRMSAEAWRDGEVEAYVSLPQSDWAHWLPPR 244

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
               W+       G F +     +L    +     RL G +        ++   L
Sbjct: 245 VLGQWHADTLRAGGEFWIGWGKGQLQRAVVRLNAPRLEGAY-AGRKAANLNNLAL 298


>gi|282879119|ref|ZP_06287878.1| AsmA family protein [Prevotella buccalis ATCC 35310]
 gi|281298761|gb|EFA91171.1| AsmA family protein [Prevotella buccalis ATCC 35310]
          Length = 1545

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/384 (13%), Positives = 121/384 (31%), Gaps = 49/384 (12%)

Query: 1   MLRRVLIGLGFLFSVVLVGAF------TVPLFIDWTDFREDFERQATLIVGKKIAVKGGI 54
           M+++ L+  G +  V +  +        +P    W   +  +   A+   G +I++    
Sbjct: 1   MMKKALLWGGAILGVPVALSALLAILLYIPPVQQWMLQKATY--YASQKTGMEISIG--- 55

Query: 55  KIHILPFPSVFFKDIRIDQKEDGSF-----ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
           ++ +     +  +D+ I Q  D         +    +    + +PLLS ++ V ++  + 
Sbjct: 56  RVRLAFPLDLSMEDVLIIQPNDSLPQVKDTVASARRMVADVQLMPLLSKKVEVDELTFEG 115

Query: 110 PH---LNFYLSSK-----GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI--------ID 153
                +N   ++K     G  N             V + + +++  ++++          
Sbjct: 116 LKLNTVNLIAAAKVQGTIGKLNLVSH-GIDLSGSTVRVNEANLEDAKLQVALADSVPKDT 174

Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIKG----SVIAEGTGNFDNKRSAFKITAN 209
            ES   + +    L I    + +  P     ++     +V ++G+ +        K    
Sbjct: 175 TESKTTWKIGLDQLDIRRSDITVHLPGDTLQVRAYLGKAVASDGSFDLGEGVYQLK---- 230

Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL----EL 265
                    L       A+   +D       +    I S  +  +     +  +    + 
Sbjct: 231 -KLDWTDGKLNYDNKWKAHTNGLDYNHLALSDITVGIDSLQYQASKLDMNVRQIAFREKS 289

Query: 266 SAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED---NKTKVSQDEENLLNFSENGA 322
                 LSGN  +    + +    L++   N   D D   N        +   N      
Sbjct: 290 GLDLQHLSGNVALDSTRLSLKNAHLKTSESNLMADLDMDLNSFSEQTSGKMNANVHATLG 349

Query: 323 ESMHDLNETDFFEEEEKKNKNDDL 346
           +        D  +E ++K  N  L
Sbjct: 350 KQDLMRFMGDLPKEFKQKWPNAPL 373


>gi|126462386|ref|YP_001043500.1| hypothetical protein Rsph17029_1618 [Rhodobacter sphaeroides ATCC
           17029]
 gi|126104050|gb|ABN76728.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 1094

 Score = 65.3 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/322 (9%), Positives = 76/322 (23%), Gaps = 31/322 (9%)

Query: 16  VLVGAFTVPLFIDWTDFREDFERQATLIVG--KKIAVKG-GIKIHILPFPSVFFKDIRID 72
               AFT            + E +    +     +++ G  + +     P +   D+R+ 
Sbjct: 38  FATLAFTGRPLPLPGWAVTEAETRINRALEPALSVSLGGLVLTVEPNWIPRLRLDDVRLR 97

Query: 73  QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST-- 130
           Q +       +    +  +    L G +    + +    +     + G  ++   +    
Sbjct: 98  QADG-RTLVTLPEARVVFDRGAALRGALHPKTITLSGARIALRRLADGRFDFAMGEQGGT 156

Query: 131 ----------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                                   L +I  +G  + + D+ + + +   D  L +     
Sbjct: 157 FRLASYAELRETVDRLFAQPVLADLRRIEAEGTTLTLDDRRAGRTWQAGDGRLTLVNGPN 216

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK---------IQLFP 225
                + +  +     A          +     A   A    ++             L  
Sbjct: 217 RRALEIGLTLLNSKGRAPAQALVTFVTTPGSPEARISATVDHVAAADIAAQAAPVAWLEV 276

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
           L   +       L    +               +           R    F    G  R+
Sbjct: 277 LDAALSGRFSAALDGEGRLTRLEAGLDSGEGALQPRPETRPIAFDRAGLAFAYDPGRERL 336

Query: 286 SRYKLQSILPNSSTDEDNKTKV 307
           +  +L+    +          +
Sbjct: 337 NLTRLEVQGRSIRLSAQGHAYL 358


>gi|119503417|ref|ZP_01625500.1| AsmA [marine gamma proteobacterium HTCC2080]
 gi|119460479|gb|EAW41571.1| AsmA [marine gamma proteobacterium HTCC2080]
          Length = 1186

 Score = 65.3 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/363 (12%), Positives = 105/363 (28%), Gaps = 15/363 (4%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R +         ++        +  D   FR+    + + ++ + +          +  
Sbjct: 1   MRSINKFFIATALLISALVVVTLITKDSDFFRDFVALKTSQLLQRNVTFSDLDIDIDIDR 60

Query: 62  PSV-FFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
                  ++ I Q E   G     +    + A    L   + ++  +   QP L+     
Sbjct: 61  SINITVANVVIAQPEGFKGPAFLSLASAELNASIPDLFLSQPKIKSLRFTQPKLHLIQGV 120

Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
           +G SNW  + +         L       G    ++  +     L+ ++ Q   R L +  
Sbjct: 121 EGHSNWQFKLNKTQATA---LTSGKPAKGIPVFLESANIDDLQLTLIDNQEETRTLRVDV 177

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
            L  D     +   G  N    ++    ++   A      + + L      + ++    +
Sbjct: 178 TLDQDLSGAKLSVVGDVNKAPLQADVTASS-ADAFTSLTDINVGLDMHLGDVHLEGKALV 236

Query: 239 FWNEKQPIYSGVFSVAGDFS---KLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
                        ++ G        L       +  L  +  +  G +     +L  ++ 
Sbjct: 237 RDLRSPNTPQVEIALQGPSVEYFTELLNLPPFSQGALDLSISVQPG-IEKIVVRLDGLVG 295

Query: 296 NSSTDEDNKT-KVSQDEENLLNFSENGAES--MHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
           + S              +  L  + +G +   + DL     F           +K+D  +
Sbjct: 296 DFSGVISGTVNNFRTLTDVELAVAVSGPDIGRLADLLGAPKFPHVPFSATG-KVKRDQQR 354

Query: 353 YSV 355
            SV
Sbjct: 355 LSV 357


>gi|119947093|ref|YP_944773.1| hypothetical protein Ping_3491 [Psychromonas ingrahamii 37]
 gi|119865697|gb|ABM05174.1| hypothetical protein Ping_3491 [Psychromonas ingrahamii 37]
          Length = 432

 Score = 65.3 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/370 (9%), Positives = 101/370 (27%), Gaps = 38/370 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R  +   F+  ++         F D    R    +Q   + G ++  +  +  H+   
Sbjct: 1   MKRCFVTGAFILGLLGFLLLLFIRFFDINAHRGFISKQIEQLSGYQVNFE-SVDSHLFSD 59

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ------------ 109
            SV    + +           ++ + +    L L   ++++ ++ +              
Sbjct: 60  YSVSLSGLSLTIAN--RQVFYVDKVKVNLTKLNLWQRQLKLGEVQLTGVRISGDTAAFIN 117

Query: 110 -PHLNFYLSSKGVSNWFQRKSTMDMIHN-VILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
              +    +S  V    + +    +    + + +  V   +I+        V        
Sbjct: 118 TADVKIVENSNSVQQTAEVQIQKKLAWQRLTISRFSVNDLKIEFTHAGQRVVLD------ 171

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
              A F +    +  D     +   G      +    + TA+     K + L        
Sbjct: 172 --GADFTSDNLQIIADHKLVKMPFSGNLKLLAREFTAQPTASKTLTVKNLQLTASFNLKN 229

Query: 228 YPIIIDLF-GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR-LSGNFKISDGNVRI 285
               +    G+L         +   +            ++   S+  SG  ++    + +
Sbjct: 230 LQANLSFKAGSLNLAFGPEEVALQNTELVAELNNNKASITKLTSQIFSGQLQLQAEALFL 289

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
            +        +S      +  V +     +N             ++   ++ +      +
Sbjct: 290 IK------PLSSPFLSVQQLTVQKLAIKNMNV-----VIPAVFKDSGAVKKNKLLFPITN 338

Query: 346 LKKDDIQYSV 355
           L   ++    
Sbjct: 339 LLLKELIVKN 348


>gi|146277888|ref|YP_001168047.1| hypothetical protein Rsph17025_1851 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556129|gb|ABP70742.1| hypothetical protein Rsph17025_1851 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 1097

 Score = 65.3 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/328 (9%), Positives = 80/328 (24%), Gaps = 31/328 (9%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKG-GIKIHILPFPSVFF 66
           G+    ++ L G          ++      R  +  +   ++V G  + +     P +  
Sbjct: 34  GVAGFATLALTGRPLPLPVWAVSEAEARINRALSPAL--SVSVGGIVLTVEPSWIPRLRL 91

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126
            D+R+ Q +       +    +  +    L G +    + +    +       G  +   
Sbjct: 92  DDVRLLQADG-RVLVSLPEARVAFDRGAALRGALHPKVITLSGARIALRRMRDGRFDLAM 150

Query: 127 RKST------------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
            +                      +     L +I  +G  + + D+ + + +   D  L 
Sbjct: 151 GEQGGGLRIASYAEAREAVDRMFALPLLADLARIEAEGTTLTLDDRRAGRTWQAGDGRLA 210

Query: 169 ISARFLNIISPLSID----SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK---- 220
           +  R       L +            A  T          +I+A       +        
Sbjct: 211 LVNRPDRRALELGLSLLDPGGGAPAQAVMTFVTTPGSPEARISATVDQVAASDIAAQAAP 270

Query: 221 -IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
              L  L   +       L    +   +           +           R    F   
Sbjct: 271 VAWLEVLDTALSGGFSAALDGEGRLTRFEATLDSGEGALQPRPETKPIAFDRAGMAFSYD 330

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKV 307
               R++  +L+    +          +
Sbjct: 331 PARERLNLTRLEVQGRSLRLSAQGHAYL 358


>gi|113970751|ref|YP_734544.1| hypothetical protein Shewmr4_2416 [Shewanella sp. MR-4]
 gi|113885435|gb|ABI39487.1| protein of unknown function DUF748 [Shewanella sp. MR-4]
          Length = 1072

 Score = 65.3 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/351 (10%), Positives = 117/351 (33%), Gaps = 33/351 (9%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP-SVFFK 67
                ++  +    V   +           + T ++G+ + ++    + I PF   V  +
Sbjct: 21  FLVYLAITYLSYLIVLGLVLPKAIVSFTPEKLTQVLGRPVTLQ---DMRINPFTYRVNIE 77

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL-SSKG----- 120
            + + +K++    + +  L     F   + +  + +  + +  P  N     ++G     
Sbjct: 78  QLEVKEKDN-QAFAGLSQLQFEVNFWQSVFNQALVIDHIQLQGPFANVSRFQTQGVTQFN 136

Query: 121 ------VSNWFQRKSTMD------MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
                   N  +  S  D          VIL ++ +  G++K  D+ +  +    ++N +
Sbjct: 137 FDDIITRLNQPKTPSEPDTTTEKTRPLRVILGELTLTSGKVKFDDKITQALVDYPNINFK 196

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
           +S      +      S   S   +            +        +   +  +     A+
Sbjct: 197 LSQLDTEYLMTAKPTSPANSQATQSQNKPTTAAPTAQANTASNPPSILHNQFVVQLQDAH 256

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFS------KLLNLELSAKKSRLSGNFKIS--- 279
              + L G       + +     +                ++L+A +  ++ ++++    
Sbjct: 257 AGEVSLAGQFQLFPFKLVGDVQLAKLQLAPFWPFVADQFKVKLAAGELSINSHYQVDLPT 316

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330
           +G+++++  + Q I+        +++ ++     +   + + A+   D+ +
Sbjct: 317 EGDLQLTADRGQVIVQKVDLLNGDQSAIALPLLAIDGINLDLAKQRIDIKQ 367


>gi|255264469|ref|ZP_05343811.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
 gi|255106804|gb|EET49478.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
          Length = 1116

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/368 (11%), Positives = 102/368 (27%), Gaps = 44/368 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVP--LFIDWTDFREDFERQATLIV-GKKIAVKG-GIKIHI 58
           R  L+ L      V++ AF +        T  +   E QA+  + G  I +    I I  
Sbjct: 47  RAALLVLAIPLIFVVLAAFLIVGQEITAPTWIKSRIETQASEALAGGAIRMDEITITIAR 106

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLS 117
              PSV  + + +         ++++ +        LL  G+I    + +D   L     
Sbjct: 107 DLHPSVTLRGVSVQDANGQR-LARVQTVRAGVSPRGLLFQGDILPQTVSLDGAELALTRD 165

Query: 118 SKGVSNWFQRKSTM-------------------DMIHNVILEKIHVKGGRIKIIDQESDQ 158
           + G                              D      LE++   G  +   DQ + +
Sbjct: 166 ANGAVALAFETGAAPAQTASNLPELLDGLDAMFDAPALAALEEVRATGLILNYADQRARR 225

Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAI 217
            + +      ++    ++    S+  + G S +      ++++R            +   
Sbjct: 226 TWIVDGGRAVLTVDDQSLSLGSSVALLSGRSYVTTLAATYESRRGTSAAELGLNITDAVA 285

Query: 218 S-----------LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS 266
           +           L +   PL+  +   +             +                + 
Sbjct: 286 ADIASQSPALSFLTLIDAPLSGAMRASIDDAGTL--GPINATLELGQGALRPTAQTAPIG 343

Query: 267 AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS--QDEENLLNF-SENGAE 323
               ++   +  +D  +R  +   +      +   +    +   +D+         N   
Sbjct: 344 FDALKIYLGYDPADTGLRFDQI--EVASDWGNVIAEGHAYLRELRDDIPQALLGQFNLTN 401

Query: 324 SMHDLNET 331
              + N+ 
Sbjct: 402 ISLNPNDV 409


>gi|330969674|gb|EGH69740.1| hypothetical protein PSYAR_04188 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 1271

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 97/297 (32%), Gaps = 19/297 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A+  +G  +++ G ++     F
Sbjct: 13  RWGLSLCALILVLAALYVSLGRQLTPLVAEYRVDVETRASSALGIPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P +   D+ + +   G+   +++ + +  +    LL+ ++R+  + +D    +      
Sbjct: 72  APVLLANDVMVGE---GASALRLDRVRVVPDLWESLLARDVRIAHLEVDGLQFSLRQDKD 128

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           G  +        D   +    +  +K  ++       D    +   +    A        
Sbjct: 129 GAWSIQGLPVHNDSPFDP---EQALKQMQMVAHVSLLDSQVTVQPFDA---APLTLTYVN 182

Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235
           LS+D+   +   +      D +  A  + +       K+    +   L    +   +   
Sbjct: 183 LSLDTGSYAQRLDARLTLPDGQPVALNMRSRIQASQWKDGEADIYASLPQSDWARWLPKS 242

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
               W   +    G   ++     + +        ++ G +        I+   L +
Sbjct: 243 LTREWTLAKLQAGGEVWLSWGKGTVQSATTRLNAPQVKGVY-AGHKPSTINNLALNA 298


>gi|262198433|ref|YP_003269642.1| hypothetical protein Hoch_5264 [Haliangium ochraceum DSM 14365]
 gi|262081780|gb|ACY17749.1| protein of unknown function DUF490 [Haliangium ochraceum DSM 14365]
          Length = 1515

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 105/335 (31%), Gaps = 33/335 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTD--FREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R+  GL  L  V + G       ID      R         ++  ++ + G I+  +L  
Sbjct: 12  RLFAGLVLLIVVAVAGVLAFLH-IDRGRAFVRNQVVSALDDLLAGRLEI-GSIEGSLLD- 68

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
                + + +   E     ++++ +++  +   L++ E+ +  +  +   ++ Y +  G 
Sbjct: 69  -EFSLRHVVLYDGE-ERVAAEVDLITVDTDLWQLINNEVAIEHVSAEGVRVHAYRNPDGS 126

Query: 122 SNWFQ-------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
            N  Q          T      + ++++ V  G   I + +      + D  L       
Sbjct: 127 LNLAQLVAPQPEEPDTGPSPWVIDIDQVTVLDGAFSITEPDGSTSLSVRDFGLDGELLTG 186

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                +++D        E    +D+      + A F   + A++       L    ++  
Sbjct: 187 GGHVHVAVD--------ELRARWDDVARDALVRATFGIHDGAVTAYGVEARLGEGRVLAP 238

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                W + +       ++A     +  ++  A  + L     +    +RI    L    
Sbjct: 239 LAYFDWQKMRL-----LALAAADVPVALVDDLAPDTGLLSGISLVTAALRIDD-SLPIWF 292

Query: 295 PNSSTDEDNKTKVSQDEENL-----LNFSENGAES 324
             S+     + +     E       L     G + 
Sbjct: 293 ALSADAGGGRVQALGAAEPEIPAASLRLGAEGVDL 327


>gi|186686055|ref|YP_001869251.1| hypothetical protein Npun_F6018 [Nostoc punctiforme PCC 73102]
 gi|186468507|gb|ACC84308.1| protein of unknown function DUF490 [Nostoc punctiforme PCC 73102]
          Length = 1977

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/401 (11%), Positives = 104/401 (25%), Gaps = 31/401 (7%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66
           I L  L  + ++           T+     ++  T  + + + +    +  +     V F
Sbjct: 29  IALSGLLLLGVIIGIWRLWTFVQTELTPLAQQSLTTTLNRPVKLGKVTQFSL---TGVQF 85

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS-NWF 125
               I         + +E + +    L L+       D+ +  P +      +G   +  
Sbjct: 86  GASAIPATPTDLDRATVESVEVGFNPLQLIFNRHLKLDVTLVNPDIYIQQDEQGRWVSTS 145

Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY-----FLSDLNLQISARFLNIISPL 180
              S         L+ +  +  ++ ++ QE  +        +S  +      F  +    
Sbjct: 146 IASSGGGGAIKTDLDYLRFRNAKLALMPQERGREAGEAGEGISSASPTSPVTFSQLNGSA 205

Query: 181 SIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNL 238
            + +    +  E  G  D     + +             +K Q L       +I L  NL
Sbjct: 206 QLLANNQLIRFEVGGQADSGGNISIEGETRSKVLAGNFQVKAQDLLAADITRLIKLPVNL 265

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL----------SGNFKISDGNVRISRY 288
                        +         N  +     ++           GN +     ++++  
Sbjct: 266 QAGRANGDLLIRLTPGQQTLLYGNAAVQGVTLQIPKVPQLLSNSQGNLRFQGTELQLNNV 325

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLN-FSENGAESMHDLN---------ETDFFEEEE 338
                           T+        +N  S   A+    +          + D      
Sbjct: 326 TTNYGKIPVVATGIIDTQAGFKLAGRVNAVSLANAQETLKVKLPVPIAGQVQADLQITGS 385

Query: 339 KKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
            K          IQ +   K + ++   K      S   +I
Sbjct: 386 TKEPIISASVATIQTARIDKVDFNSISSKFELVTSSSSSLI 426


>gi|66047385|ref|YP_237226.1| hypothetical protein Psyr_4158 [Pseudomonas syringae pv. syringae
           B728a]
 gi|63258092|gb|AAY39188.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae
           B728a]
          Length = 1271

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 98/297 (32%), Gaps = 19/297 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A+  +G  +++ G ++     F
Sbjct: 13  RWGLSLCALILVLAALYVSLGRQLTPLVAEYRVDVETRASSALGIPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P +   D+ + +   G+   +++ + +  +    LL+ ++R+  + +D    +      
Sbjct: 72  APVLLAHDVMVGE---GASALRLDRVRVVPDLWESLLARDVRIAHLEVDGLQFSLRQDKD 128

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           G  +        D   +    +  +K  ++       D    +   +    A        
Sbjct: 129 GAWSVQGLPVHNDSPFDP---EQALKQMQMVAHVSLLDSQVTVQPFDA---APLTLTYVN 182

Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235
           LS+D+   +   +      D +  A  + +       K+    +   L    +   +   
Sbjct: 183 LSLDTGSYAQRLDARLTLPDGQPVALNVRSRIQASQWKDGEADIYASLPQSDWARWLPKS 242

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
               W   +    G   ++     + +        ++ G +     +  I+   L +
Sbjct: 243 LTREWTLAKLQAGGEVWLSWGKGTVQSATTRLNAPQVKGVYAGRKPS-TINNLALNA 298


>gi|330981115|gb|EGH79218.1| hypothetical protein PSYAP_21487 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 1233

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 100/307 (32%), Gaps = 19/307 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A+  +G  +++ G ++     F
Sbjct: 13  RWGLSLCALILVLAALYVSLGRQLTPLVAEYRVDVETRASSALGIPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P +   D+ + +   G+   +++ + +  +    LL+ ++R+  + +D    +      
Sbjct: 72  APVLLAHDVMVGE---GASALRLDRVRVVPDLWESLLARDVRIAHLEVDGLQFSLRQDKD 128

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           G  +        D   +    +  ++  ++       D    +   +    A        
Sbjct: 129 GAWSVQGLPVHNDSPFDP---EQVLRQMQMVAHLSLLDSQVTVQPFDA---APLTLTYVN 182

Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235
           LS+D+   +   +      D +  A  + +       K+    +   L    +   +   
Sbjct: 183 LSLDTGSYAQRLDARLTLPDGQPVALNVRSRIQASQWKDGEADVYASLPQSDWAKWLPKS 242

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
               W   +    G   ++     + +        ++ G +     +  I    L +   
Sbjct: 243 LTREWTLSKLQAGGEVWLSWGKGTVQSATTRLNAPQVKGVYAGRKPS-TIDNLALNAWFA 301

Query: 296 NSSTDED 302
            + T  D
Sbjct: 302 RTDTGFD 308


>gi|299139205|ref|ZP_07032381.1| protein of unknown function DUF490 [Acidobacterium sp. MP5ACTX8]
 gi|298598885|gb|EFI55047.1| protein of unknown function DUF490 [Acidobacterium sp. MP5ACTX8]
          Length = 1414

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/293 (10%), Positives = 83/293 (28%), Gaps = 23/293 (7%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFR----EDFERQATLIVGKKIAVKGGIKI 56
           +LR +    G L  ++++    V  +    DF+     +  +      G  + + G +  
Sbjct: 23  ILRVLGWIFGSLALLLVLLVVGVSFYTTTDDFQHRVGGEVVKVLEDSTGAHVEL-GHLSF 81

Query: 57  HILPFPSVFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSG--------EIRVFDMY 106
            +    ++    + +   +    +     + + +R      LS          + V  + 
Sbjct: 82  SLW-HLAIEADGLVLHGTEGPGEAPYLSADKIFVRLRINTFLSHIVGKGPQSHVGVNYLR 140

Query: 107 IDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
           ++QPH++  +   G +N    K        +    + ++ G++++ +  +         +
Sbjct: 141 VEQPHIHLIIDKDGKTNQPVPKHKGTSTEPIQDTLLDLQAGKVELANGLAVLNDRAIPFD 200

Query: 167 LQISARFLNIISPLSIDSIKGSVIA-EGTGNFDNKR-----SAFKITANFPAKNKAISLK 220
           L      + +    S D    +V   +       +                      SL 
Sbjct: 201 LAAQDLAVEVHYIASSDHYGATVDLADLRTKMAKQPEVQSKLHLTAEIGRDMAQLQ-SLD 259

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS 273
            +     +     L  +      Q    G   +           L+     L 
Sbjct: 260 FRTGATTHLTANALLQHFNKPAWQVQAKGSVELKQLGFLTGVEGLTGGLVDLD 312


>gi|167623599|ref|YP_001673893.1| hypothetical protein Shal_1668 [Shewanella halifaxensis HAW-EB4]
 gi|167353621|gb|ABZ76234.1| protein of unknown function DUF748 [Shewanella halifaxensis
           HAW-EB4]
          Length = 1037

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/393 (11%), Positives = 110/393 (27%), Gaps = 37/393 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF- 61
           +R+LI    ++         +  +I      +   +Q + ++ + I ++    + I PF 
Sbjct: 22  QRLLIISAAIYLTFTAILGLLVPYI----LVKQAPQQLSALLQRPITLE---SVKINPFT 74

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL--SS 118
             V     ++ + ++       + LS   +F   + +    V D+ +  P +N     S 
Sbjct: 75  LEVAIDKFQLLETDN-KPFVSFQQLSFEYQFWNSVFNTAFSVADVTLTAPAINVVRVKSP 133

Query: 119 KG-VSNWFQ---------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           +G   N+                   ++   I + ++  + +    +  +D  ++     
Sbjct: 134 QGLRFNFSDIIDSLANRHTEESVSDSTSSAGIPHFMVTNLAIINANLSFVDHVTNSQLHY 193

Query: 163 SDLNLQISARFLNIIS-----PLSIDSIKGSVIAEGTGNFDNK-RSAFKITANFPAKNKA 216
            +LN  +               L  +       A  TG       +   I  +       
Sbjct: 194 PNLNFNVKFFDSKHAIKSTLENLGDEQKTNHYSAHVTGRNGGVIATQGLIQLSPLNIVGD 253

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF 276
             L   +    +   I           +   S  + +     K   +       +L  + 
Sbjct: 254 AQLT-NIQLPQFWSFISKKFAPELTSGRLSLSSNYQLQMQDDKFE-VTTDLGLVQLD-DV 310

Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEE 336
                   I +  + ++   +   +         + N L  +    ++  DL        
Sbjct: 311 NFDYQKQSIIKLPMIALKGIAFNLQQQTVTAETLDTNGLLLNAKINKNGVDLAALFTPLS 370

Query: 337 EEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369
           E   +          Q   NK   +     K +
Sbjct: 371 ETATSAQKAEANPTTQTLANKNNNQSQEQSKPS 403


>gi|254482271|ref|ZP_05095512.1| hypothetical protein GPB2148_888 [marine gamma proteobacterium
           HTCC2148]
 gi|214037596|gb|EEB78262.1| hypothetical protein GPB2148_888 [marine gamma proteobacterium
           HTCC2148]
          Length = 1108

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/289 (12%), Positives = 81/289 (28%), Gaps = 15/289 (5%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIEG 85
           D  + +   E   + ++ +++ ++   ++ +     +   ++R+           +  + 
Sbjct: 38  DNDNAKWALEEVVSRLLQRELEIEKIHELQVGQNVFLLASNVRLANPAWAPKAPFAHSDR 97

Query: 86  LSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM--------DMIHN 136
           L +      L   G I +  + +    LN    S     W               D    
Sbjct: 98  LLLEINVPSLWRKGPIVIHRVELTNAELNLLSHSDHAPTWSFWPEEDSLADDPVEDSSFP 157

Query: 137 VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196
           +++    +    ++  D + D    +  L +        I   L+  +    V A G   
Sbjct: 158 IVINDGRLSTAVVRFQDDDQDINIEVESLLIDQEVEGGLIGLQLAATANGYPVSALGRVG 217

Query: 197 FDNKRSAFK-ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255
                   + I  N  AK + + L      L       L   +     +        +  
Sbjct: 218 PPKALVTGRNIEMNLAAKVEKLELTASGKALDLANAKGLAMEISARAPRSRVLLDM-LGM 276

Query: 256 DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS-ILPNSSTDEDN 303
              +    +L A      GNF +S    ++  + L            D 
Sbjct: 277 PEVRDGPFQLQASLKPKDGNFSVSAIG-KLGEFDLSIEGTSRDPLALDG 324


>gi|116326985|ref|YP_796705.1| hypothetical protein LBL_0154 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116119729|gb|ABJ77772.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 683

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 87/301 (28%), Gaps = 42/301 (13%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE 84
           +FI    +++    +     G  + V     + +LPFP V    +++  ++        +
Sbjct: 37  VFIRQDFYKDFILTEIEKKTGLDVKVDSS-DLVLLPFPGVELGTVQV--RKGNLIVGVSD 93

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST-------------- 130
            + +   +  LL  ++ + D+YI    +N +    G  +  +                  
Sbjct: 94  RIKINISWFGLLGQKVEIRDIYISGGKINLHKHKDGSIDLIEFFQQEKYKLESVHQTQTI 153

Query: 131 ---------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
                             I  + L+ I ++   +   D   D+ Y +   N   S  F  
Sbjct: 154 KIFDSSFTAENTLFNPKEIFKIGLKNIQIENFHVHYQDDTHDREYLIYLWNSAFSISFYG 213

Query: 176 IISPLSIDS--IKGSVIAEGTGNFDNKRSA---FKITANFPAKNKAISLK---IQLFPLA 227
               L +       S    G+ + +         K  +       ++S+    + +FP A
Sbjct: 214 NALDLILQGKLDGQSFQIYGSADLNEFPVTLENLKFQSTIILDKCSLSIFRDLLVVFPNA 273

Query: 228 YPIIIDLFGNLFWNE-KQPIYSGVFSVAGDFSK-LLNLELSAKKSRLSGNFKISDGNVRI 285
                 L G +   +      +   +  G              K  +     I +  +  
Sbjct: 274 DFSKTILNGTIRIKKAPNEPINFNVTAQGKDFAYQGGNPFGDIKLNMELRLDIPNKKLDF 333

Query: 286 S 286
            
Sbjct: 334 P 334


>gi|116332349|ref|YP_802067.1| hypothetical protein LBJ_2909 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116126038|gb|ABJ77309.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 683

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 87/301 (28%), Gaps = 42/301 (13%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE 84
           +FI    +++    +     G  + V     + +LPFP +    +++  ++        +
Sbjct: 37  VFIRQDFYKDFILTEIEKKTGLDVKVDSS-DLVLLPFPGIELGTVQV--RKGNLIVGVSD 93

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST-------------- 130
            + +   +  LL  ++ + D+YI    +N +    G  +  +                  
Sbjct: 94  RIKINISWFGLLGQKVEIRDIYISGGKINLHKHKDGSIDLIEFFQQEKYKLESVHQTQTI 153

Query: 131 ---------------MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
                             I  + L+ I ++   +   D   D+ Y +   N   S  F  
Sbjct: 154 KIFDSSFTAENTLFNPKEIFKIGLKNIQIENFHVHYQDDTHDREYLIYLWNSAFSISFYG 213

Query: 176 IISPLSIDS--IKGSVIAEGTGNFDNKRSA---FKITANFPAKNKAISLK---IQLFPLA 227
               L +       S    G+ + +         K  +       ++S+    + +FP A
Sbjct: 214 NALDLILQGKLDGQSFQIYGSADLNEFPVTLENLKFQSTIILDKCSLSIFRDLLVVFPNA 273

Query: 228 YPIIIDLFGNLFWNE-KQPIYSGVFSVAGDFSK-LLNLELSAKKSRLSGNFKISDGNVRI 285
                 L G +   +      +   +  G              K  +     I +  +  
Sbjct: 274 DFSKTILNGTIRIKKAPNEPINFNVTAQGKDFAYQGGNPFGDIKLNMELRLDIPNKKLDF 333

Query: 286 S 286
            
Sbjct: 334 P 334


>gi|261856322|ref|YP_003263605.1| membrane protein-like protein [Halothiobacillus neapolitanus c2]
 gi|261836791|gb|ACX96558.1| membrane protein-like protein [Halothiobacillus neapolitanus c2]
          Length = 1346

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/350 (12%), Positives = 103/350 (29%), Gaps = 30/350 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI- 58
           ++R +L  +  +  ++ +    + + +   T++RE+ +   +   G  +   G I +   
Sbjct: 20  LIRFLLASVAVILVLLALAFSVLRVVLPHMTNYREEAQTVLSKAWGAPVQF-GSIDVAFV 78

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLS 117
              P +   D+R+           I    +       L +       + ID+PHL F   
Sbjct: 79  NYRPQLVLTDLRLGNNGP-----VISRFGVSLAPWRSLVARHWVAGKIVIDKPHLAFIQQ 133

Query: 118 SKGVSNWFQRKSTMDMIHN--------------VILEKIHVKGGRIKIIDQESDQVYFLS 163
           + G         T                      L  + +    +  I   +  ++   
Sbjct: 134 ADGKWTLSGAPQTSPQNDPEKTANSWADWLSRLPDLGDVSINEAVVSWIRPATSDLHESR 193

Query: 164 D-LNLQISARFLNIISPLSID-----SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217
             +NL  +AR       LS +          V     G+  ++    ++       N   
Sbjct: 194 QTINLNATARLAAHGWSLSGELFAPGFGNSPVRLRADGHLGDEP-NAEVYLGAHNWNLPA 252

Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
             +         +  ++ G     E     +G+  V             A  S  S +  
Sbjct: 253 MQQAIRDFTHGSVRAEIGGCAEHVEGLDCSAGMPLVNQGQLSGELWLRFAGTSLRSVSAD 312

Query: 278 ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               ++++SR    + +   ++ +   T        L   + +G     D
Sbjct: 313 FDISSLKVSRMAKIAGIGALASTQSQATLHRIGGRLLWQKTTDGWRLDAD 362


>gi|261253979|ref|ZP_05946552.1| possible exported protein [Vibrio orientalis CIP 102891]
 gi|260937370|gb|EEX93359.1| possible exported protein [Vibrio orientalis CIP 102891]
          Length = 1289

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/386 (10%), Positives = 104/386 (26%), Gaps = 43/386 (11%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64
           + + +  L  + +              F+   +       G    + G         PS+
Sbjct: 13  LWLTVTVLIVLAIAVTGLRIALPQLNHFQPQIQAWVNQGSGLDFEISGLHGFWRNTHPSI 72

Query: 65  FFKDIRIDQKEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFY----LSSK 119
             + ++    E        E + +  +    ++  +  V D+ I Q +L+       +  
Sbjct: 73  SLQGVKAQTPESSGIHFSAETVEVEIDLFQTIMQLQPVVADLNIYQLNLDITSVQWATGD 132

Query: 120 GVSNWFQRKSTMDMIHNVI------LEKIHVKGGRIKIID-QESDQVYFLSDLNLQISAR 172
             S    +     +I  +       L+   +   +I  +    +++   ++ L  Q   R
Sbjct: 133 DKSELKPQGEQKGVIQQLDQLFLRQLDSFTIADSQIHFLGIDGTERELNIAKLRWQNDGR 192

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
                  +S+        A    N    ++ F    +    +    +  Q   +   +  
Sbjct: 193 HHLADGEISL--------ANSQINSAKVKANFVDYGSLAEVSGEFYVSAQNVLVTPWLSK 244

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
            L       + Q  ++   ++         LEL       S      +G        ++S
Sbjct: 245 YLKTETGIEKGQISFNSWLTLEKSQPVSAYLELE------SSELIWQEGGRH--ELSIES 296

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN-ETDFFEEEEKKNKNDDLKKDDI 351
            +      E                + +  +   D     +     + + +   L    +
Sbjct: 297 GVLELEPIEQG-----------WQVNAHSLKLRTDDKAWPELDMAFDWQPEQWRLNVSQL 345

Query: 352 QYSVNK---KEEKDNSHDKENQENFS 374
             +      K   ++    E  E FS
Sbjct: 346 DIATITPLVKLAPNSQATSELIETFS 371


>gi|298488463|ref|ZP_07006494.1| putative exported protein [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298157088|gb|EFH98177.1| putative exported protein [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 1005

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/331 (10%), Positives = 91/331 (27%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R L         V+V    +  FI          +Q          ++   ++   P+
Sbjct: 16  MSRGLKRTLGSLLTVIVLYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPY 72

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 73  TLELTLWGLNIGTP--GKEQVAFEKLYANLQIDSLWTRALHLQRIELIKPKTELLFDKQG 130

Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168
             N             +         + +++I +  G +   D    Q        LN +
Sbjct: 131 KLNLAQLFKLPASEPAKDEPPGKPFPLRIDEIKLADGYVHFQDMRPSQPIEFLYDTLNFE 190

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           +            +  +      G +   G  +     S   +           P    A
Sbjct: 191 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 250

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L        K    S   +     +      +  ++  +S  +
Sbjct: 251 LPLALEDGVLNFSTAYTLNLAKETELKLTNVSASVAPFALNTPDGRPLVRLQRLDVSETS 310

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + Q +   ++ + D +  
Sbjct: 311 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 341


>gi|17227958|ref|NP_484506.1| hypothetical protein all0462 [Nostoc sp. PCC 7120]
 gi|17129807|dbj|BAB72420.1| all0462 [Nostoc sp. PCC 7120]
          Length = 1829

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/357 (10%), Positives = 93/357 (26%), Gaps = 19/357 (5%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           + RR  + LG +    +           + D     E     ++G+ I +    ++    
Sbjct: 14  LARRASLVLGVMALGGIATGAWWARNYIYNDLAPLVETNLEQLLGRSIKLG---QVEGFT 70

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             S+ F  + I            + + ++     +L     V D+ + +P++       G
Sbjct: 71  LSSLRFSSLSIPATPTDPDTVTAQAVDVQFSPWQILVTRTLVLDVTLVKPNVYIQQEQDG 130

Query: 121 VSNWFQRKSTMDMIH-NVILEKIHVKGGRIKIIDQESDQV-------YFLSDLNLQISAR 172
                + K+          L+ +++  G I+++   +            +  +       
Sbjct: 131 RWVMAEVKTGEGSGAIQTQLQTLNIVDGNIELLSASAPTKPQGSVVLTQVGGVARFSPDN 190

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
                      +  G+V   G      + +  ++ A     +    L +QL  +     I
Sbjct: 191 ERIGYQINGQLTRGGTVQISGETQPKTQLTNVQVVAQSLLASDVSRL-VQLPIVFQSGRI 249

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
           D          Q   S   +   +        L    S+ +G        + +   +   
Sbjct: 250 DADLAAQIPANQSEISITGTATANQVTAKVQNLPQPFSKANGRLIFQGQTIALENLRTNF 309

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349
                    +             N +             D  +         ++  D
Sbjct: 310 GQV--PLFANGTVNTQTG----FNLAAQVKSVSVK-QLLDTLKVNSPIPAAGEVTAD 359


>gi|312959609|ref|ZP_07774126.1| hypothetical protein PFWH6_1511 [Pseudomonas fluorescens WH6]
 gi|311286326|gb|EFQ64890.1| hypothetical protein PFWH6_1511 [Pseudomonas fluorescens WH6]
          Length = 358

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/370 (9%), Positives = 98/370 (26%), Gaps = 31/370 (8%)

Query: 2   LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++R     L  +  L  +++     +P  +     R     +   +   +  +   + + 
Sbjct: 1   MKRRYSWPLWTVAGLVVLLVALNIALPYLV-----RNYLNEKLADMGDYRGEIA-DVDLA 54

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +    +     ++I + +            +     +  L      V +    +P +NF 
Sbjct: 55  LWRG-AYRINGLKIVKVDGKVPVPFVNAPLIEFAVSWHSLWYDHAVVAEGQFVRPEVNFV 113

Query: 116 LSSKGVSNWFQRKSTMDMIHN--------VILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
               G +N    ++               + L +I ++ G+I   +  S     ++  ++
Sbjct: 114 ---DGGANKQASQTGKGTDWQEQLSKLLPITLNEIRIEDGKIAFHNFTSKPAVNINATSV 170

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNK-RSAFKITANFPAKNKAISLKIQLFPL 226
             S   L  +  +           +G      +       T +  +  +    + +   L
Sbjct: 171 NASFYNLTNVVDVKGKRDA---RFDGKALLQGQAPLEASATFDPLSDFEEFEFRFRARDL 227

Query: 227 AYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
               + D     G   +                  +     L            + + + 
Sbjct: 228 QLKRMNDFASAYGKFDFKAGTGDVVIEAQAEKGQLRGYIKPLLRDVEVFDWQQDVENKDK 287

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343
            I R   ++++    T   N+ K        L+ S +  +                +  N
Sbjct: 288 NIFRSIWEAVVGAGETVLKNQGKNQFATRVELSGSVHQQDVSAFSAFLAILRNGFIQAFN 347

Query: 344 DDLKKDDIQY 353
              ++     
Sbjct: 348 ARYEQPKPSA 357


>gi|107099939|ref|ZP_01363857.1| hypothetical protein PaerPA_01000960 [Pseudomonas aeruginosa PACS2]
          Length = 1276

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 80/253 (31%), Gaps = 16/253 (6%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
           +R+  E +A   +G  + +   +      F P V  +DI++   E      ++  + +  
Sbjct: 43  YRQQLEDEAGKQLGIPVRIA-ELTGSWRGFEPLVVARDIQVGDGEQS---LRLARVRLAP 98

Query: 91  EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149
           + L  LL+ ++R+  + ++   L       G  +      +        L +  ++  RI
Sbjct: 99  DLLGSLLARQVRIGSLELEGLKLTLREGEDGQWSLDGLPHSDKPSDPRKLLQFLLQTQRI 158

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208
            ++D + +            +A  L+ +      S  G    +      D +  A     
Sbjct: 159 SLLDSQLEVAPR------GSAALSLSAVGATLRSSSVGGQSLDARLQLPDGQPLALHAEG 212

Query: 209 NFPAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
              +++    +    + L    +   +       W   +    G F       K   L  
Sbjct: 213 RIDSEDWPRSSARFYLSLPQSDWAQWLPAGLTQEWKIARAKAGGDFWFDWRDGKAQRLVA 272

Query: 266 SAKKSRLSGNFKI 278
                +L  ++  
Sbjct: 273 RLLAPQLKASYAA 285


>gi|116052508|ref|YP_792821.1| hypothetical protein PA14_58090 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115587729|gb|ABJ13744.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 1276

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 80/253 (31%), Gaps = 16/253 (6%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
           +R+  E +A   +G  + +   +      F P V  +DI++   E      ++  + +  
Sbjct: 43  YRQQLEDEAGKQLGIPVRIA-ELTGSWRGFEPLVVARDIQVGDGEQS---LRLARVRLAP 98

Query: 91  EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149
           + L  LL+ ++R+  + ++   L       G  +      +        L +  ++  RI
Sbjct: 99  DLLGSLLARQVRIGSLELEGLKLTLREGEDGQWSLDGLPHSDKPSDPRKLLQFLLQTQRI 158

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208
            ++D + +            +A  L+ +      S  G    +      D +  A     
Sbjct: 159 SLLDSQLEVAPR------GSAALSLSAVGATLRSSSVGGQSLDARLQLPDGQPLALHAEG 212

Query: 209 NFPAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
              +++    +    + L    +   +       W   +    G F       K   L  
Sbjct: 213 RIDSEDWPRSSARFYLSLPQSDWAQWLPAGLTQEWKIARAKAGGDFWFDWRDGKAQRLVA 272

Query: 266 SAKKSRLSGNFKI 278
                +L  ++  
Sbjct: 273 RLLAPQLKASYAA 285


>gi|126452785|ref|YP_001067558.1| hypothetical protein BURPS1106A_3321 [Burkholderia pseudomallei
           1106a]
 gi|242317493|ref|ZP_04816509.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei
           1106b]
 gi|126226427|gb|ABN89967.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei
           1106a]
 gi|242140732|gb|EES27134.1| conserved hypothetical protein TIGR02099 [Burkholderia pseudomallei
           1106b]
          Length = 1397

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 77/249 (30%), Gaps = 24/249 (9%)

Query: 2   LRRVLIGLGFLFS---------VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKG 52
           LRRV  G+  +            + +    +P      ++R   E   +  +  ++ + G
Sbjct: 23  LRRVFKGVLAIAIAAYFIAATAFLGLRYLLLPRI---DEYRPRIEAFVSQKLHAELRI-G 78

Query: 53  GIKIHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111
            +  H     P V    + I  ++       +   +    +  L      +  + +D P 
Sbjct: 79  RLAPHWSGMQPGVDISRLTIRGRDG-RVALSVPHATAALLWRSLARFAPTLSSLVVDDPD 137

Query: 112 LNFYLSSKGVSNWF--------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
           L     + G                        +  E I ++GG ++  D + D    L+
Sbjct: 138 LLTERRADGSLFVAGVAVPTTKTGADDTFSAWLLKQEAIVLRGGTLRWRDAQHDAP-ELA 196

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
              ++I+     ++  +++ +     +  G  +F  +     +       N      +  
Sbjct: 197 LTGIRIAVLNDGLVHRIALQAPANGTLFHGPLDFRARFVHQALAPIGKPSNWTGDAYLST 256

Query: 224 FPLAYPIII 232
            P+  P + 
Sbjct: 257 GPVDLPTLA 265


>gi|254238863|ref|ZP_04932186.1| hypothetical protein PACG_05030 [Pseudomonas aeruginosa C3719]
 gi|126170794|gb|EAZ56305.1| hypothetical protein PACG_05030 [Pseudomonas aeruginosa C3719]
          Length = 1276

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 80/253 (31%), Gaps = 16/253 (6%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
           +R+  E +A   +G  + +   +      F P V  +DI++   E      ++  + +  
Sbjct: 43  YRQQLEDEAGKQLGIPVRIA-ELTGSWRGFEPLVVARDIQVGDGEQS---LRLARVRLAP 98

Query: 91  EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149
           + L  LL+ ++R+  + ++   L       G  +      +        L +  ++  RI
Sbjct: 99  DLLGSLLARQVRIGSLELEGLKLTLREGEDGQWSLDGLPHSDKPSDPRKLLQFLLQTQRI 158

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208
            ++D + +            +A  L+ +      S  G    +      D +  A     
Sbjct: 159 SLLDSQLEVAPR------GSAALSLSAVGATLRSSSVGGQSLDARLQLPDGQPLALHAEG 212

Query: 209 NFPAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
              +++    +    + L    +   +       W   +    G F       K   L  
Sbjct: 213 RIDSEDWPRSSARFYLSLPQSDWAQWLPAGLTQEWTIVRAKAGGDFWFDWRDGKAQRLVA 272

Query: 266 SAKKSRLSGNFKI 278
                +L  ++  
Sbjct: 273 RLLAPQLKASYAA 285


>gi|218893567|ref|YP_002442436.1| hypothetical protein PLES_48551 [Pseudomonas aeruginosa LESB58]
 gi|218773795|emb|CAW29609.1| hypothetical protein PLES_48551 [Pseudomonas aeruginosa LESB58]
          Length = 1276

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 80/253 (31%), Gaps = 16/253 (6%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
           +R+  E +A   +G  + +   +      F P V  +DI++   E      ++  + +  
Sbjct: 43  YRQQLEDEAGKQLGIPVRIA-ELTGSWRGFEPLVVARDIQVGDGEQS---LRLARVRLAP 98

Query: 91  EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149
           + L  LL+ ++R+  + ++   L       G  +      +        L +  ++  RI
Sbjct: 99  DLLGSLLARQVRIGSLELEGLKLTLREGEDGQWSLDGLPHSDKPSDPRKLLQFLLQTQRI 158

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208
            ++D + +            +A  L+ +      S  G    +      D +  A     
Sbjct: 159 SLLDSQLEVAPR------GSAALSLSAVGATLRSSSVGGQSLDARLQLPDGQPLALHAEG 212

Query: 209 NFPAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
              +++    +    + L    +   +       W   +    G F       K   L  
Sbjct: 213 RIDSEDWPRSSARFYLSLPQSDWAQWLPAGLTQEWTIVRAKAGGDFWFDWRDGKAQRLVA 272

Query: 266 SAKKSRLSGNFKI 278
                +L  ++  
Sbjct: 273 RLLAPQLKASYAA 285


>gi|66047400|ref|YP_237241.1| hypothetical protein Psyr_4173 [Pseudomonas syringae pv. syringae
           B728a]
 gi|63258107|gb|AAY39203.1| Protein of unknown function DUF748 [Pseudomonas syringae pv.
           syringae B728a]
          Length = 1009

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/331 (11%), Positives = 95/331 (28%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R L         V+     +  FI          +Q          ++   ++   PF
Sbjct: 16  MSRGLKRTLGSLLAVIALYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPF 72

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 73  TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRVELIKPRTELLFDKQG 130

Query: 121 VSNWFQ----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166
             N  Q          +         + +++I + GG +   D    Q         D  
Sbjct: 131 KLNLAQLFKLPASEPTQDEPASKPFPLRIDEIKLAGGYVHFQDLRPSQPIEFLYDALDFE 190

Query: 167 LQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           L+  +      + +++ +     G +   G  +     S   +           P    A
Sbjct: 191 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 250

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L  +     K    S   +     +         ++  +S  +
Sbjct: 251 LPLALEDGVLNFSTAYTLNLSKETELKLTNVSASVAPFALNAPDGRPLARLQRLDVSETS 310

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + Q +   ++ + D +  
Sbjct: 311 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 341


>gi|160874828|ref|YP_001554144.1| hypothetical protein Sbal195_1711 [Shewanella baltica OS195]
 gi|160860350|gb|ABX48884.1| protein of unknown function DUF748 [Shewanella baltica OS195]
 gi|315267067|gb|ADT93920.1| hypothetical protein Sbal678_1750 [Shewanella baltica OS678]
          Length = 1161

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/380 (12%), Positives = 113/380 (29%), Gaps = 53/380 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR ++       S V      +P  I           + + ++G+ + + G I+I+    
Sbjct: 19  LRVLVYLTAVYLSYVCTLGLILPYAITT-----LAPEKLSALLGRPVTL-GDIRINPF-N 71

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL-SSK 119
             V    + I +K+     + +  +     F   + +    + +++I  P+ +      K
Sbjct: 72  FKVEIDQLAIKEKD-EKPFAGLAQVQFEVNFWQSVFNRAAVIENIHIQAPYAHIIRVEKK 130

Query: 120 GVSNW-----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           G + +                     +       V+L +  +  G+    D+ +      
Sbjct: 131 GKAGFNFDDILQTLNEHSSASTETTPAEASAPVRVLLSQFVLDAGQFNFDDKITHAQVNY 190

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
            ++NL++S       +   + ++  SV      N           +     + +  + IQ
Sbjct: 191 PNINLKLSQLD----TEYLMSALSASVAPATKANKTEANPTPNAQSASDTGSGSQVMPIQ 246

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
               A  +  D  G +          G F +          ++   K +L+  ++  D  
Sbjct: 247 HNHYAIQLSDDHAGEIS-------LQGQFQLFPLKVAG---DVHIAKLKLTPLWRFIDDQ 296

Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE-----SMHDLNETDFFEEE 337
                   +  L +       + +V   E   L  + N  +        +  E    +  
Sbjct: 297 -------FKPALTDGEITAKTQYQVDLAENGELQVTSNNGQFIVEKLNFNDQERSVVKLP 349

Query: 338 EKKNKNDDLKKDDIQYSVNK 357
                   +     Q  +NK
Sbjct: 350 IFALDGITMDLKQQQVRINK 369


>gi|331674762|ref|ZP_08375521.1| conserved hypothetical protein [Escherichia coli TA280]
 gi|331068201|gb|EGI39597.1| conserved hypothetical protein [Escherichia coli TA280]
          Length = 1266

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/322 (11%), Positives = 89/322 (27%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQI 169
                  + G  N     S +  +     +   ++   +  +     +    +  L    
Sbjct: 115 FRTNTPITSGGGNASLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 170 SARFLNIISPLSIDSIKGS---VIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
             R       +S+ S+ G    +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGQVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|330987062|gb|EGH85165.1| hypothetical protein PLA107_18689 [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 990

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/331 (10%), Positives = 91/331 (27%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R L         V+V    +  FI          +Q          ++   ++   P+
Sbjct: 1   MSRGLKRTLGSLLTVIVLYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPY 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 58  TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRIELIKPKTELLFDKQG 115

Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168
             N             +         + +++I +  G +   D    Q        LN +
Sbjct: 116 KLNLAQLFKLPASEPAKDEPPGKPFPLRIDEIKLADGYVHFQDMRPSQPIEFLYDTLNFE 175

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           +            +  +      G +   G  +     S   +           P    A
Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L        K    S   +     +      +  ++  +S  +
Sbjct: 236 LPLALEDGVLNFSTAYTLNLAKETELKLTNVSASVAPFALNTPDGRPLVRLQRLDVSETS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + Q +   ++ + D +  
Sbjct: 296 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 326


>gi|15599672|ref|NP_253166.1| hypothetical protein PA4476 [Pseudomonas aeruginosa PAO1]
 gi|9950713|gb|AAG07864.1|AE004861_5 hypothetical protein PA4476 [Pseudomonas aeruginosa PAO1]
          Length = 1276

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 80/253 (31%), Gaps = 16/253 (6%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
           +R+  E +A   +G  + +   +      F P V  +DI++   E      ++  + +  
Sbjct: 43  YRQQLEDEAGKQLGIPVRIA-ELTGSWRGFEPLVVARDIQVGDGEQS---LRLARVRLAP 98

Query: 91  EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149
           + L  LL+ ++R+  + ++   L       G  +      +        L +  ++  RI
Sbjct: 99  DLLGSLLARQVRIGSLELEGLKLTLREGEDGQWSLDGLPHSDKPSDPRKLLQFLLQTQRI 158

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208
            ++D + +            +A  L+ +      S  G    +      D +  A     
Sbjct: 159 SLLDSQLEVAPR------GSAALSLSAVGATLRSSSVGGQSLDARLQLPDGQPLALHAEG 212

Query: 209 NFPAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
              +++    +    + L    +   +       W   +    G F       K   L  
Sbjct: 213 RIDSEDWPRSSARFYLSLPQSDWAQWLPAGLTQEWTIVRAKAGGDFWFDWRDGKAQRLVA 272

Query: 266 SAKKSRLSGNFKI 278
                +L  ++  
Sbjct: 273 RLLAPQLKASYAA 285


>gi|257482254|ref|ZP_05636295.1| hypothetical protein PsyrptA_03232 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331011506|gb|EGH91562.1| hypothetical protein PSYTB_17880 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 990

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/331 (10%), Positives = 91/331 (27%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R L         V+V    +  FI          +Q          ++   ++   P+
Sbjct: 1   MSRGLKRTLGSLLTVIVLYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPY 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 58  TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRIELIKPKTELLFDKQG 115

Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168
             N             +         + +++I +  G +   D    Q        LN +
Sbjct: 116 KLNLAQLFKLPASEPAKDEPPGKPFPLRIDEIKLADGYVHFQDMRPSQPIEFLYDTLNFE 175

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           +            +  +      G +   G  +     S   +           P    A
Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L        K    S   +     +      +  ++  +S  +
Sbjct: 236 LPLALEDGVLNFSTAYTLNLAKETELKLTNVSASVAPFALNTPDGRPLVRLQRLDVSETS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + Q +   ++ + D +  
Sbjct: 296 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 326


>gi|296391186|ref|ZP_06880661.1| hypothetical protein PaerPAb_23659 [Pseudomonas aeruginosa PAb1]
          Length = 1276

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 81/253 (32%), Gaps = 16/253 (6%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
           +R+  E +A   +G  + +   +      F P V  +DI++   E      ++  + +  
Sbjct: 43  YRQQLEDEAGKQLGMPVRIA-ELTGSWRGFEPLVVARDIQVGDGEQS---LRLARVRLAP 98

Query: 91  EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149
           + L  LL+ ++R+  + ++   L       G  +      +        L +  ++  RI
Sbjct: 99  DLLGSLLARQVRIGSLELEGLKLTLREGEDGQWSLDGLPHSDKPSDPRKLLQFLLQTQRI 158

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208
            ++D + +            +A  L+ +      S  G    +      D +  A     
Sbjct: 159 SLLDSQLEVAPR------GSAALSLSAVGATLRSSSVGGQSLDARLQLPDGQPLALHAEG 212

Query: 209 NFPAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
              +++    +  + + L    +   +       W   +    G F       K   L  
Sbjct: 213 RIDSEDWLRSSARVYLSLPQSDWAQWLPAGLTQEWKIVRAKAGGDFWFDWRDGKAQRLVA 272

Query: 266 SAKKSRLSGNFKI 278
                +L  ++  
Sbjct: 273 RLLAPQLKASYAA 285


>gi|148546221|ref|YP_001266323.1| hypothetical protein Pput_0978 [Pseudomonas putida F1]
 gi|148510279|gb|ABQ77139.1| membrane protein-like protein [Pseudomonas putida F1]
          Length = 1271

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 95/283 (33%), Gaps = 20/283 (7%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60
           R  +G+  L +V++    ++   +     ++R D E +A   +G  + V G ++ H    
Sbjct: 13  RWGLGICALLAVLVALYVSLGRELVPLVAEYRADVESKAEQALGMPVHV-GALEGHWSGL 71

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSK 119
            P +  +D+++ +   G+   +++ + +  +    L+  E+R+  + +    L    + +
Sbjct: 72  APVLRVRDLQLGE---GTKALRLDDVMVVPDIWASLTAREVRLARIQLGGLQLILRENEQ 128

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
           G  +        D   +       ++  GRI + D        L  L+            
Sbjct: 129 GAWSLEGLPKKDDAPLDPADLLQRLRQLGRIDVFD-------SLVTLHPWQRDPLTLTYV 181

Query: 179 PLSIDSIKGSVIAEGTGNF-DNKRSAFKITANF---PAKNKAISLKIQLFPLAYPIIIDL 234
              + +       +      D +  A  + +       ++  +   + L    +   +  
Sbjct: 182 SAGLQAGATRQALDLRATLPDGQPLALSLNSRMSADAWRDGEVEAYVSLPQSDWAHWLPP 241

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
                W+       G F +     +L    +     RL G + 
Sbjct: 242 RVLGQWHADTLRAGGEFWIGWSKGQLQRAVVRLNAPRLEGAYA 284


>gi|222110967|ref|YP_002553231.1| asma family protein [Acidovorax ebreus TPSY]
 gi|221730411|gb|ACM33231.1| AsmA family protein [Acidovorax ebreus TPSY]
          Length = 761

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 30/90 (33%), Gaps = 14/90 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI----- 56
           LR  L  +G + + +++    +    DW   +     + +   G+  ++ G +       
Sbjct: 22  LRWTLGTIGAVVAALVLFIVVLVN-WDWNRAKPWVNDKVSEATGRTFSIDGDLSAEWHWP 80

Query: 57  --------HILPFPSVFFKDIRIDQKEDGS 78
                     +P  +V  + + +   E   
Sbjct: 81  QPLEEGWRRWVPGVTVRAQQLSLSNPEGFE 110


>gi|94986802|ref|YP_594735.1| asmA protein [Lawsonia intracellularis PHE/MN1-00]
 gi|94731051|emb|CAJ54414.1| asmA protein [Lawsonia intracellularis PHE/MN1-00]
          Length = 670

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/338 (10%), Positives = 96/338 (28%), Gaps = 31/338 (9%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS 78
               + ++ +         +      G+ +       +   P P +          +   
Sbjct: 17  SGIAIFIYTNKDKITLAISKAVESATGQPLYTDSIPSLSFFPTPGIELGKSSWGNPDTNE 76

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL--------------SSKGVSNW 124
              ++     R   L L +G I + +++ +QP +                  +S    N 
Sbjct: 77  ISVELIKCVFRFSLLKLFTGTIAIDEIFFEQPSIIIQKKNAQNKKIQSTAAVTSTNAINP 136

Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
            + K     +  + +  + +K G +K  D     +     L  +           +   +
Sbjct: 137 QEDKKASFQLPEISISSVTIKDGMLKFFDGRKQIILTGLQLTAKNIYPQSTGKISIHTQA 196

Query: 185 I----KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
           +      S + EG  +    ++   I       N    L +     + PI I+  G   +
Sbjct: 197 LFQPENISFVTEGNVSIILDKNILSIEHIKFIINPKTGLTV-----STPITIEGNGRYLF 251

Query: 241 N-EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI---LPN 296
           +            +        N   S + ++L G   + + +  + +         +  
Sbjct: 252 DKNLLEKSDIQVKLDQFKI---NANGSLELNKLQGT-AVINASGSLKKLASTLGMMLITP 307

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334
            +   +N +  S+ + N         + M D ++    
Sbjct: 308 ETKIFENFSAQSKVQVNGQYIQLTDLKIMLDDSQVTGK 345


>gi|330888651|gb|EGH21312.1| hypothetical protein PSYMO_07285 [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 990

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/331 (10%), Positives = 91/331 (27%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R L         V+V    +  FI          +Q          ++   ++   P+
Sbjct: 1   MSRGLKRTLGSLLTVIVLYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPY 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 58  TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRIELIKPKTELLFDKQG 115

Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168
             N             +         + +++I +  G +   D    Q        LN +
Sbjct: 116 KLNLAQLFKLPASEPAKDEPPGKPFPLRIDEIKLADGYVHFQDMRPSQPIEFLYDTLNFE 175

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           +            +  +      G +   G  +     S   +           P    A
Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSRMKLWWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L        K    S   +     +      +  ++  +S  +
Sbjct: 236 LPLALEDGVLNFSTAYTLNLAKETELKLTNVSASVAPFALNTPDGRPLVRLQRLDVSETS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + Q +   ++ + D +  
Sbjct: 296 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 326


>gi|154490148|ref|ZP_02030409.1| hypothetical protein PARMER_00378 [Parabacteroides merdae ATCC
           43184]
 gi|154089040|gb|EDN88084.1| hypothetical protein PARMER_00378 [Parabacteroides merdae ATCC
           43184]
          Length = 1130

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/298 (11%), Positives = 85/298 (28%), Gaps = 39/298 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLF---------IDWTDFREDFERQATLIVGKKIAVKG 52
           ++R    L  +    +   F +P           +           QA   +   +  + 
Sbjct: 38  MKRKKKILTIIVLATITLIFILPAIGFSILNWGVLPPEKLTPLVIEQANKFIDAHLDCE- 96

Query: 53  GIKIHIL---PFPSVFFKDIRIDQKE-------------DGSFESKIEGLSMRAEFLPLL 96
            +++      P+  V   +  +                            ++  + L  L
Sbjct: 97  RVELTYFETYPYLGVKLTNGHLISHAAEDSTAHEEELAIPSDSLLAFNRATLSLQPLDYL 156

Query: 97  SG-EIRVFDMYIDQPHLNFYLSSKGVSNWF---------QRKSTMDMIHNVILEKIHVKG 146
            G +I + D  I+ P    +++  G +NW          +  +    +  + L+K+ + G
Sbjct: 157 FGSKITIKDFSIENPRFYGFVNKNGRANWDIYESETDSTETDAGKKPLPPIDLQKVRIYG 216

Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN--FDNKRSAF 204
           G     D+++D    +    +++        + L ++    S++         ++     
Sbjct: 217 GHFTYDDRQADLFTEMQGFFVRLDGSLAGGANTLDLEMGCSSLLFSNPTYTLKNDLSLHL 276

Query: 205 KITANFPAKNKAISLK-IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261
           K          + +LK  +L     P   D     F   +         +       L
Sbjct: 277 KSRLVLAEHYNSTTLKDAELKVNNLPFTADGTIRHFPENRHTRIDMDMGLKISDMNDL 334


>gi|289627540|ref|ZP_06460494.1| hypothetical protein PsyrpaN_20827 [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289646968|ref|ZP_06478311.1| hypothetical protein Psyrpa2_04332 [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330868253|gb|EGH02962.1| hypothetical protein PSYAE_13582 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 990

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/331 (10%), Positives = 91/331 (27%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R L         V+V    +  FI          +Q          ++   ++   P+
Sbjct: 1   MSRGLKRTLGSLLTVIVLYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPY 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 58  TLELTLWGLNIGTP--GKEQVAFEKLYANLQIDSLWTRALHLQRIELIKPKTELLFDKQG 115

Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168
             N             +         + +++I +  G +   D    Q        LN +
Sbjct: 116 KLNLAQLFKLPASEPAKDEPPGKPFPLRIDEIKLADGYVHFQDMRPSQPIEFLYDTLNFE 175

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           +            +  +      G +   G  +     S   +           P    A
Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L        K    S   +     +      +  ++  +S  +
Sbjct: 236 LPLALEDGVLNFSTAYTLNLAKETELKLTNVSASVAPFALNTPDGRPLVRLQRLDVSETS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + Q +   ++ + D +  
Sbjct: 296 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 326


>gi|152984193|ref|YP_001350426.1| hypothetical protein PSPA7_5090 [Pseudomonas aeruginosa PA7]
 gi|150959351|gb|ABR81376.1| hypothetical protein PSPA7_5090 [Pseudomonas aeruginosa PA7]
          Length = 1275

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 79/253 (31%), Gaps = 16/253 (6%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
           +R+  E +A   +G  + +   +      F P V  +DI++ +   G    ++  + +  
Sbjct: 43  YRQQLEDEAGKQLGIPVRIA-ELSGSWRGFEPLVVARDIQLGEDPQG---LRLARVRVVP 98

Query: 91  EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149
           + L  LL+ + R+  + ++   L     + G  +      +        L    ++  RI
Sbjct: 99  DLLGSLLARQARIASLELEGLKLTLREGADGQWSLDGLPRSDKPSDPRQLLNFLLQTQRI 158

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208
            ++D + +            +     + + L   S+ G    +      D +  A     
Sbjct: 159 SLLDSQLEVAPRGRK-----TLSLSALGATLRSSSVAGQ-RLDARLTLPDGQPLALHAEG 212

Query: 209 NFPAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
               ++       + + L    +   +       W   +    G F       K   L  
Sbjct: 213 RIKPEDWLRSNARVYLGLPQSDWAQWLPAGLTGEWKIARAKAGGDFWFDWRDGKAQRLVA 272

Query: 266 SAKKSRLSGNFKI 278
                +L  ++  
Sbjct: 273 RLLAPQLKASYAA 285


>gi|310778410|ref|YP_003966743.1| protein of unknown function DUF490 [Ilyobacter polytropus DSM 2926]
 gi|309747733|gb|ADO82395.1| protein of unknown function DUF490 [Ilyobacter polytropus DSM 2926]
          Length = 1482

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 58/387 (14%), Positives = 109/387 (28%), Gaps = 35/387 (9%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +LR+          V+L+               +         VG  I ++    I    
Sbjct: 4   LLRKYHKVFAAFVVVILIMISYSLYTTVRYSLPQTVRTILIKAVGPDIEMQ---SIKFRE 60

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           F  +    + +  K+          + +R  F  ++ G I    + I  P +        
Sbjct: 61  FGRIEASGVTL--KDGEELILSAPKVEVRYSFRRIIKGRI--DSIDIKNPKVWISRDKNN 116

Query: 121 VSNW---------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
             N            + ST      V ++ I   GG +   D   ++    +  N++   
Sbjct: 117 NINIVKAFSKKSQSGKSSTSKAGTGVPIDMITATGGELIYRDIAYERPIEKTVYNVKGYV 176

Query: 172 RFLNII-SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
            F       L  D   G        + ++ R A  I  N    N  +            +
Sbjct: 177 SFHKDKGINLDFDGDIGEEKYRFLFDNNDTRYALGIKLNNININNNLMQYAYNSEKISYL 236

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
              +  +L         SG F      + +    LS     +SGN   +   + I     
Sbjct: 237 SGTVNLDLTLKPGSFTGSGDFR----NASVTYEGLSGTPENISGNVSFNGDKIYI----- 287

Query: 291 QSILPNSSTDEDN-KTKVSQDEENLLNFSENGAESMHD---LNETDFFEEEEKKNKNDDL 346
                NS  D D  K +             +      D   L + D  + ++   K  + 
Sbjct: 288 -----NSDYDFDGKKGQFLLSLVRKERLDLDFYFKDVDYAFLEKYDLLKRQKFPLKGTEF 342

Query: 347 KKDDIQYSVNKKEEKDNSHDKENQENF 373
               +  + NK  +   + D ++ E F
Sbjct: 343 DLVHVNLNFNKDYKLAVNVDFKSPEYF 369


>gi|302185439|ref|ZP_07262112.1| hypothetical protein Psyrps6_03814 [Pseudomonas syringae pv.
           syringae 642]
          Length = 994

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/331 (11%), Positives = 95/331 (28%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R L         V+     +  FI          +Q          ++   ++   P+
Sbjct: 1   MSRGLKRTLGSLLAVIALYSLLGFFILPGVALRIANQQLASYATVPAKLE---RLEFNPY 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 58  TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRVELIKPRTELLFDKQG 115

Query: 121 VSNWFQRKSTMDM----------IHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166
             N  Q                    + +++I + GG +   D    Q         D  
Sbjct: 116 KLNLAQLFKLPASEPTKDEPATKPFPLRIDEIKLAGGYVHFQDLRPSQPIEFLYDALDFE 175

Query: 167 LQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           L+  +      + +++ +     G +   G  +     S   +           P    A
Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L  +     K    S   +     +      +  ++  +S  +
Sbjct: 236 LPLALEDGVLNFSTAYTLNLSKETELKLTNVSASVAPFALNAPDGRPLVRLQRLDVSETS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + Q +   ++ + D +  
Sbjct: 296 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 326


>gi|260886517|ref|ZP_05897780.1| conserved hypothetical protein [Selenomonas sputigena ATCC 35185]
 gi|330839640|ref|YP_004414220.1| protein of unknown function DUF490 [Selenomonas sputigena ATCC
           35185]
 gi|260863660|gb|EEX78160.1| conserved hypothetical protein [Selenomonas sputigena ATCC 35185]
 gi|329747404|gb|AEC00761.1| protein of unknown function DUF490 [Selenomonas sputigena ATCC
           35185]
          Length = 1444

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/339 (12%), Positives = 101/339 (29%), Gaps = 32/339 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFT---VPLFIDWTDFRED----FERQATLIVGKKIAVKGGI 54
           +++  I    +   + + A              + E+       +A+  +G  +A+    
Sbjct: 1   MKKGSIVFAAVVIALFLFALVCGTAAYIARTGAYVEEAGRTLSAKASESLGVPVAID--- 57

Query: 55  KIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIR--VFDMYIDQPHL 112
            + +  + ++    I +  +       +     +       LS      +  + + +P L
Sbjct: 58  AVRVESWHTLALDGIAVQDRAG-EEILRAAHAEVEMSLFAALSASPVAAISHVTVIEPEL 116

Query: 113 NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
           +    + G  N           ++    K+ VK G+  +    S +   L D+  ++   
Sbjct: 117 SLQQRADGSWNVADLVQQEAGGNDFC-GKVSVKEGKANV--AVSGKEIALEDIGAELDFV 173

Query: 173 FLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
             + +S  +  S KG  +  EG  + + +    K          A   +  L     P  
Sbjct: 174 HKSSVSVEAEASCKGAPLAVEGEVSKERQELKLKGENINAMDYIAFLPEGVLPDEIEPQA 233

Query: 232 IDLFGNLFW---NEKQPIYSGVFSVAGDFSK--LLNLELSAKKSRLSGNFKISDGNVRIS 286
           + +   +            +G   ++G  +    + +E S      SG            
Sbjct: 234 LHVDETVLKLVREADDVSLAGDVRLSGAKALVHGMEVEASRGLVVFSGKEA--------- 284

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
           R  L++      T    K     +E    NF    A   
Sbjct: 285 RIFLRASAEEQQTSIHGKVAWQ-EEVPSFNFVVESAAFD 322


>gi|58584381|ref|YP_197954.1| hypothetical protein Wbm0121 [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58418697|gb|AAW70712.1| Uncharacterized protein involved in outer membrane biogenesis
           [Wolbachia endosymbiont strain TRS of Brugia malayi]
          Length = 856

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/310 (10%), Positives = 94/310 (30%), Gaps = 33/310 (10%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--- 78
               F DW  ++E   +        K+ + G +++ ++  P +   ++ +    +     
Sbjct: 20  VTVTFKDWDSYKEYIVQGLEKTYNAKVHIGGKVEVSLI-TPKLTVHNVYMQCNNNKEQKL 78

Query: 79  -FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV 137
                +  + +R   L L    ++   + +     N         N+    +     + V
Sbjct: 79  STLIGVNKIEVRPSILSLFLFSLQPKSITLLGMKSN-------RENFINIINAKTSSNAV 131

Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197
            +    +KG ++ + +  +D    +      I    +      S +    S   + +G  
Sbjct: 132 DI---VIKGSQVSLNNNFTDYDNIV-----NIEKVAIGKSKQFSGEIRVDSNDYDFSGKV 183

Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257
           +  +    I+      N   + K     L   + + +  +  +                 
Sbjct: 184 NITKKNVHISVESNFINLLFTGKKNQAGLQGKLTLTINNSSDFINDLAKI--------TN 235

Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317
              L   +  +   +S N   +  +   +  K++S    +S    N       + N  N 
Sbjct: 236 LSFLAYVIPGENIEISSNIDFNGNDFTATDLKIKSKSMQASGIIQND-----RKSNHTNI 290

Query: 318 SENGAESMHD 327
           + + ++   D
Sbjct: 291 NISFSKVNLD 300


>gi|77747532|ref|NP_298416.2| hypothetical protein XF1126 [Xylella fastidiosa 9a5c]
          Length = 1279

 Score = 64.1 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/318 (11%), Positives = 83/318 (26%), Gaps = 22/318 (6%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60
           R V      +F  V +    +   +       +      ++  G+ +     +       
Sbjct: 12  RYVAYVCVGVFVAVALAMGILSQLLPVVERHPQQVADWLSVRTGQPVRFD-TLNTSWTQR 70

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            P +  + +RI           I  + +       L     + ++ +    L  +  S G
Sbjct: 71  GPLLRLQGVRI----GPQGRMAIGEVEVLVAMYTGLLPGHSLIELRLRGMALTVHRDSAG 126

Query: 121 VSNWFQRKSTMDMIHN---VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
             + +     +          L ++ V GGR+ +    S     LS +NL++      + 
Sbjct: 127 RWSVYGLPRDVGGDPLEVLRRLGELQVIGGRLSVDAPSSGVSTTLSQINLRVRVAGDRLR 186

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
           + +            G  +FD       +         A    +    +    + D  G+
Sbjct: 187 AGVHGWLDSARAPVTGVVDFDRVSGDGDVYVETLPNQLASWSSLLAGVMRGVHLRDGAGH 246

Query: 238 LFWNEKQPI-------YSGVFS---VAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285
           +    +            G        G       +       +L     ++      R+
Sbjct: 247 VRAWAQLHRHHVEQVTVQGDLQGVRFEGVRLAGQTVVPRVFWPQLQALVRWQRQGDGWRV 306

Query: 286 SRYKLQSILPNSSTDEDN 303
              +L+          D 
Sbjct: 307 VAPRLRMGESGRLQKLDG 324


>gi|83954336|ref|ZP_00963056.1| hypothetical protein NAS141_18559 [Sulfitobacter sp. NAS-14.1]
 gi|83841373|gb|EAP80543.1| hypothetical protein NAS141_18559 [Sulfitobacter sp. NAS-14.1]
          Length = 1114

 Score = 64.1 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/414 (10%), Positives = 107/414 (25%), Gaps = 47/414 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVP--LFIDWTDFREDFERQATL-----IVGK-KIAVKGGI 54
           +  L+ +  + + +   A  +     +         E +         +G  ++ +    
Sbjct: 21  KWSLLVISLIVATIAGAAIYMIRSPIVVPEWLETRIEERFAKDMPLARIGFGEMVLIVDE 80

Query: 55  KIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
                  P V  +D+ I   +  S  +    +        LL+G+++  D+ +     N 
Sbjct: 81  GWR----PRVRLRDVNITNPQGVS-FAAFREVRASFSIQGLLAGDVQPRDIAMSGVVANL 135

Query: 115 YLSSKGVSNWFQRKSTMDMIHNV--------------------ILEKIHVKGGRIKIIDQ 154
                G         T                            L  I ++   ++  D 
Sbjct: 136 RRDKDGRVALSAASGTAPAERRAATMPQLIGQLDTVFETKALSRLRSIELRALTLRYTDL 195

Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214
           +S +++ +    L +     N+     +  + G   A       + +     +      +
Sbjct: 196 QSGRMWTVDGGRLLLDREGDNLRMTAELAVLGGGADAATLSANYSSKIGDTASQFGVNFD 255

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLF-WNEKQPIYSGVFSVAGDFSKLLN----LELSAKK 269
              +  I +   A+  +  L  ++           G F       ++          A  
Sbjct: 256 GVSAGDIAVQNPAFAWLKVLRASISGSVRSSLDEDGTFEPLNATLQIGAGVVQPNERATP 315

Query: 270 SRLSG-----NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL-NFSENGAE 323
               G     ++      +R     ++      S   +    +  D+   L         
Sbjct: 316 IPFDGARSYFSYDPDQRLLRFDELSVE--SKWVSGRIEGAASLGIDDSGKLGELVAQVRL 373

Query: 324 SMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
                +  D + +     +  DL         +    + +  D     N SGD 
Sbjct: 374 RDLVADPADIY-DTPVSIEGADLDAKITFNPFHMSVGRMDIVDGGTTLNLSGDL 426


>gi|332709310|ref|ZP_08429272.1| hypothetical protein LYNGBM3L_38760 [Lyngbya majuscula 3L]
 gi|332351856|gb|EGJ31434.1| hypothetical protein LYNGBM3L_38760 [Lyngbya majuscula 3L]
          Length = 2012

 Score = 64.1 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/308 (10%), Positives = 92/308 (29%), Gaps = 14/308 (4%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +LR V + +  +    + G      +          E+  +  + +K+ V       +  
Sbjct: 31  LLRPVFMLMVMILVSGIGGGSLFAWYFIQKQLAPTVEKNLSSFLNRKVNVGPVEGFSLN- 89

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK- 119
              V F   +I            E + +    + LL       D+ + +P++        
Sbjct: 90  --GVRFGSSQIPATPTDPDHLFTEAVKVSYNPVKLLFTRTLELDVTLVEPNIYVEQDKDL 147

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE----SDQVYFLSDLNLQISARFLN 175
              +    ++  D    V  + +  +   + ++ +            +++  +       
Sbjct: 148 NWVSTAFTQTAQDSAFKVDPKVVRWRDADVVVVPRSEVGIKQPPMRFTEVRGKSKFIDGG 207

Query: 176 IISPLSIDSIK---GSVIAEGTGNFDNKRSAFKITA-NFPAKNKAISLKIQLFPLAYPII 231
            +    ++S     G++  +G      + +   +   N  A   +  L I L      + 
Sbjct: 208 ELIRFDVNSQPLSGGNLKVKGDYRLSQEETDLHLDVDNVSAAEVSKVLLIPLKLQGGKLG 267

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
            +L       E+   Y G  + +   ++L  L     +S  +G        + ++    +
Sbjct: 268 GNLRIQRNNAEQPWQYWGTINFSDTIARLEPLPQLFTES--NGKLSFRGSQIWLNNITTR 325

Query: 292 SILPNSST 299
                +  
Sbjct: 326 FGQVPAQI 333


>gi|312963075|ref|ZP_07777560.1| domain of unknown function (DUF748) family [Pseudomonas fluorescens
           WH6]
 gi|311282586|gb|EFQ61182.1| domain of unknown function (DUF748) family [Pseudomonas fluorescens
           WH6]
          Length = 642

 Score = 64.1 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/331 (11%), Positives = 93/331 (28%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + LI         L     +   I          +Q          ++   +I + PF
Sbjct: 1   MPKGLIRAVGALLTALALYSLLGFLILPGIALRIANQQLAHYATVPARIE---RIELNPF 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              V    ++I     G  +   E L    +   L +  + + D+ +DQP         G
Sbjct: 58  SLEVTAWGLKIGDP--GKEQVGFERLYANLQIDSLWTRALHLADVQLDQPKTELLFDKSG 115

Query: 121 VSNWFQ----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166
             N  Q                    + ++ I + GG +   D    +         D  
Sbjct: 116 QLNLAQLFKLPPSEPTPADPEAKPFPLRIDNIKLAGGYVHFQDLRPSEPIEFLYDTLDFE 175

Query: 167 LQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           L+  +      + +++ +     G +  +G  +     S   +           P    A
Sbjct: 176 LKNLSTLPEDNADMTLVAAGPEGGQIDWKGNFSLIPITSKGTLKVTDGKMKAWWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +                   +   +     +      +  ++  +S   
Sbjct: 236 LPLVLEDGVLNFSTDYTFSLAKETELNLTNTAASIAPFAIKAPDGRPLVRLERLDVSETT 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++  +V + + +   +   ++ + D +  
Sbjct: 296 VDLAKQHVVVGKIRSNKLETWAAREADGQLD 326


>gi|330937954|gb|EGH41741.1| hypothetical protein PSYPI_04643 [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 994

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/331 (11%), Positives = 95/331 (28%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R L         V+     +  FI          +Q          ++   ++   PF
Sbjct: 1   MSRGLKRTLGSLLAVIALYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPF 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 58  TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRVELIKPRTELLFDKQG 115

Query: 121 VSNWFQRKSTMDM----------IHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166
             N  Q                    + +++I + GG +   D    Q         D  
Sbjct: 116 KLNLAQLFKLPASEPAKDEPATKPFPLRIDEIKLAGGYVHFQDLRPSQPIEFLYDALDFE 175

Query: 167 LQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           L+  +      + +++ +     G +   G  +     S   +           P    A
Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPIASEGTLKVTDSKMKLWWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L  +     K    S   +     +      +  ++  +S  +
Sbjct: 236 LPLALEDGVLNFSTAYTLNLSKETELKLTNVSASVAPFALNAPDGRPLVRLQRLDVSETS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + Q +   ++ + D +  
Sbjct: 296 VDLAKQLVTVGKVRSQKLETWAAREADGQLD 326


>gi|330895297|gb|EGH27635.1| hypothetical protein PSYJA_00785 [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 990

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/331 (11%), Positives = 96/331 (29%), Gaps = 35/331 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R L         V+     +  FI          +Q          ++   ++   PF
Sbjct: 1   MKRTL----GSLLAVVALYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPF 53

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 54  TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRVELIKPRTELLFDKQG 111

Query: 121 VSNWFQRKSTMDM----------IHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166
             N  Q                    + +++I + GG +   D    Q         D  
Sbjct: 112 KLNLAQLFKLPASEPAKDEPATKPFPLRIDEIKLAGGYVHFQDLRPSQPIEFLYDALDFE 171

Query: 167 LQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           L+  +      + +++ +     G +   G  +     S   +           P    A
Sbjct: 172 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 231

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L  +     K    S   +     +      +  ++  +S  +
Sbjct: 232 LPLALEDGVLNFSTAYTLNLSKETELKLTNVSASVAPFALNAPDGRPLVRLQRLDVSETS 291

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + Q +   ++ + D +  
Sbjct: 292 VDLAKQLVTVGKVRSQKLETWAAREADGQLD 322


>gi|302185326|ref|ZP_07261999.1| hypothetical protein Psyrps6_03244 [Pseudomonas syringae pv.
           syringae 642]
          Length = 1271

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 101/307 (32%), Gaps = 19/307 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A+  +G  +++ G ++     F
Sbjct: 13  RWGLSLCALILVLAALYVSLGRQLTPLVAEYRVDVETRASSALGIPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P +   D+ + +   GS   +++ + +  +    LL+ ++R+  + +D    +      
Sbjct: 72  APVLLAHDVMVGE---GSSALRLDRVRVVPDLWESLLARDVRIAHLEVDGLQFSLIQDKD 128

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           G  +        D   +    +  ++  ++       D    +   +    A        
Sbjct: 129 GAWSVQGLPVHNDSPFDP---EQVLRQMQMVAHLSLLDSQVTVQPFDA---APLTLTYVN 182

Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235
           LS+D+   +   +      D +  A  + +       K+    +   L    +   +   
Sbjct: 183 LSLDTGSYAQRLDARLTLPDGQPVALNVRSRIQASQWKDGEADVYASLPQSDWAKWMPKS 242

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
               W   +    G   ++     + +        ++ G +     +  I+   L +   
Sbjct: 243 LTREWTLSKLQAGGEVWLSWGKGTVQSATTRLNAPQVKGVYAGRKPS-TINNLALNAWFA 301

Query: 296 NSSTDED 302
            + T  D
Sbjct: 302 RTDTGFD 308


>gi|17229922|ref|NP_486470.1| hypothetical protein all2430 [Nostoc sp. PCC 7120]
 gi|17131522|dbj|BAB74129.1| all2430 [Nostoc sp. PCC 7120]
          Length = 2048

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/295 (10%), Positives = 80/295 (27%), Gaps = 12/295 (4%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +L R  + +G L  V L+G           +     +   T  + + + +       +  
Sbjct: 22  ILSRGGMAVGGLLIVGLMGGVWRLWTFVQRELTPLAQESLTTTLNRPVQLGKVTNFSL-- 79

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              V F    I        +  ++ + +    L L+       ++ +  P +     ++G
Sbjct: 80  -TGVQFAASSIPPTPTDPDKLTVDAVEVGFNPLLLVFNRQLKLNVTLVNPDVYIEQDNQG 138

Query: 121 VSNWFQ-RKSTMDMIHNVILEKIHVKGGRIKI----IDQESDQVYFLSDLNLQISARFLN 175
                              L+ I+ + G++ +     +    +    S  +         
Sbjct: 139 RWITTTIAPPGAAGAIKTDLDHINFRNGKLSLLPQVRNLAVGEAKTTSPSSSLYPPTSCP 198

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
               L        +        +N+   F           ++ ++ ++ P      I + 
Sbjct: 199 QPPCLLPPLEFSQLNGTAQLLENNQLIKFSAK-GLSDSGGSVDMEGEVRPKTTAANIQVR 257

Query: 236 GN---LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
           G         +        +       L    +  +   L G+  +    V+I R
Sbjct: 258 GQELLAADVTRLVKLPVGLAAGKVNGDLRVELVPGQTPLLYGSADLQKVTVQIPR 312


>gi|330969659|gb|EGH69725.1| hypothetical protein PSYAR_04113 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 994

 Score = 63.8 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/331 (11%), Positives = 95/331 (28%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R L         V+     +  FI          +Q          ++   ++   PF
Sbjct: 1   MSRGLKRTLGSLLAVIALYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPF 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 58  TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRVELIKPRTELLFDKQG 115

Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166
             N             +         + +++I + GG +   D    Q         D  
Sbjct: 116 KLNLAQLFKLPASEPAQDQPASKPFPLRIDEIKLAGGYVHFQDLRPSQPIEFLYDALDFE 175

Query: 167 LQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           L+  +      + +++ +     G +   G  +     S   +           P    A
Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L  +     K    S   +     +      +  ++  +S  +
Sbjct: 236 LPLALEDGVLNFSTAYTLNLSRETELKLTNVSASVAPFALNAPDGRPLVRLQRLDVSETS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + Q +   ++ + D +  
Sbjct: 296 VDLAKQLVTVGKVRSQKLETWAAREADGQLD 326


>gi|114764581|ref|ZP_01443785.1| hypothetical protein 1100011001360_R2601_26926 [Pelagibaca
           bermudensis HTCC2601]
 gi|114542957|gb|EAU45977.1| hypothetical protein R2601_26926 [Roseovarius sp. HTCC2601]
          Length = 1097

 Score = 63.8 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/332 (11%), Positives = 88/332 (26%), Gaps = 34/332 (10%)

Query: 8   GLGFLFSVVLVGAFTVP--LFIDWTDFREDFERQATLIV-GKKIAVKGGIKIHILPF--P 62
            +  L  +    A  +           RE  E +    + G  I   G + + +      
Sbjct: 32  VVMVLALIAGGAALVLVGRPLSAPDWLRESIEARLDEALPGLTIDF-GDVSVLVERDGLA 90

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            V   D+ + Q  DG   + +  L    + LPLL GE+++  + +    ++     +G  
Sbjct: 91  RVVLSDVDL-QTSDGVPVATLADLRAGLDPLPLLRGELQLGRVSLAGASMSLRRDREGRV 149

Query: 123 NWFQRKSTMDMIHNVILEKI------HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
                 +         +  I       +   R   + +   +   +   + +    +   
Sbjct: 150 GLALGDAFSSDTKAPDIPTIIAQIDAALSDPRFDSLRRIEAEALTIRYEDARAGRGWTAD 209

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNK---RSAFKITANFPAKNKAISLKIQLFPLA------ 227
              LS+    G++   G           +   + A      ++    + L  L       
Sbjct: 210 GGRLSLTREDGTLRLAGDVALLGAGDVAATLALNAESVIGEQSAQFGMNLSALPAQDIAT 269

Query: 228 ------------YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
                        PI   L G +    +    +    +     +                
Sbjct: 270 QSPALVWLSGLRAPISGALRGTMTETGELGALNATLQIGAGVLQPNPRTQPIPFGLARTY 329

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
           F     +  +S  ++       +   D +  +
Sbjct: 330 FSYDPASQALSFDEITVQSAVGTVISDGRAVL 361


>gi|305665194|ref|YP_003861481.1| putative outer membrane protein [Maribacter sp. HTCC2170]
 gi|88709946|gb|EAR02178.1| putative outer membrane protein [Maribacter sp. HTCC2170]
          Length = 909

 Score = 63.8 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 47/388 (12%), Positives = 112/388 (28%), Gaps = 56/388 (14%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58
           M +++L  +G +  + +V     P            E +   I+ K +            
Sbjct: 1   MKKKILKIIGVVLLIFVVLVVAAPFV---------LEAKIGDILKKNVNNNVNAAFDFSE 51

Query: 59  --------LPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGE---IRVFDM 105
                    P   V  KD+ +  K    G        + +R     L  GE   I + ++
Sbjct: 52  ANLSLIKSFPNAKVELKDVTVINKAPFEGDTLFAAGRVDLRMGIGELFKGEGEPIGIKNL 111

Query: 106 YIDQPHLNFYLSSKGVSNWFQRKST------MDMIHNVILEKIHVKGGRIKIIDQESDQV 159
            +D+  ++  ++ + ++N+                  + L+   +    +   D+ +   
Sbjct: 112 IVDKAKISVNVNEEEIANYEIANEDGNEELESSEGFTLNLQSYEITNSEVIYDDKAAKVY 171

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218
             +SD+  + S     + S L   +    +   + T   +  +                +
Sbjct: 172 LVVSDIMHRGSGDLSAVTSELDTKTEALVTFELDSTNYLNRNKVKLDALVGVDLAADKYT 231

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS------------ 266
             ++   +   + +   G +  NE+       F+      K     +             
Sbjct: 232 F-LKNEAMINQLPLVFDGYVKVNEENQEVDISFNTPSSDFKNFLALIPQAYSKDIKNVKT 290

Query: 267 AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
             +  + G FK       I ++K+     N+S            +   L  +        
Sbjct: 291 TGECLVKGEFKGIVDEEHIPKFKIDIQSENASF-----------KYPDLPKTVQNININM 339

Query: 327 DL-NETDFFEEEEKKNKNDDLKKDDIQY 353
            L N T   E+   +        D+ ++
Sbjct: 340 ALHNSTGIVEDTYVEINKASFIIDEDRF 367


>gi|153876016|ref|ZP_02003549.1| AsmA [Beggiatoa sp. PS]
 gi|152067521|gb|EDN66452.1| AsmA [Beggiatoa sp. PS]
          Length = 83

 Score = 63.8 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 33/76 (43%), Gaps = 2/76 (2%)

Query: 23 VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--E 80
          + LF+D  D + +     T   G+ ++++  I   + P+  +    + +           
Sbjct: 2  ILLFVDPNDHKAEISAFLTEKTGRTVSIQDDIGYTLYPWLGLDLGKMSVGNAPGFEEPLF 61

Query: 81 SKIEGLSMRAEFLPLL 96
          ++I+   +R + +PLL
Sbjct: 62 AQIDQAKVRVKLIPLL 77


>gi|254000452|ref|YP_003052515.1| hypothetical protein Msip34_2751 [Methylovorus sp. SIP3-4]
 gi|253987131|gb|ACT51988.1| protein of unknown function DUF748 [Methylovorus sp. SIP3-4]
          Length = 1199

 Score = 63.8 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/360 (11%), Positives = 119/360 (33%), Gaps = 39/360 (10%)

Query: 2   LRRVLIGLGF-LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +R +L+   F +F+ V++              R      A   +  + +V+    +   P
Sbjct: 5   IRTLLLTTPFKIFAGVVIAYLLFAYLAVDPLARRILPWFAETKLASQASVE---HVKFDP 61

Query: 61  -FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
               +    +++  +++G   +  + L +  E   L+    R+ D+ +  PH+   + + 
Sbjct: 62  LRLILTIDQLKL-NQKNGVPLASFDRLYVNLETSGLVRFAWRIKDIRLTAPHVAVEVGAD 120

Query: 120 GVSNWFQR---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
           G  NW             +    +  ++++ I ++GG +  +++   Q + L+   L + 
Sbjct: 121 GRLNWADLIARLNEDKDDTPSTSMPRLLIDHILIEGGDVAYVERNRPQPFELALQPLGLE 180

Query: 171 ARFLNI--------ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN--------FPAKN 214
              L+         +    + +  GS+   G    +   S   +              K+
Sbjct: 181 LDGLSTLPEDRGDYLIVAKLPADGGSLKWRGDIGLNPLVSQGVLELQGIKLAPLMQIVKH 240

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQP-----IYSGVFSVAGDFSKLLNLELSAKK 269
           +A+ +++    L   +          +++ P     +     ++    +++      A+ 
Sbjct: 241 QALPVRLTQGELQSRLTYSFAMVKGADQQDPTPEAIVQDLSLALDNVAAEVQGQHGPAQL 300

Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE-NGAESMHDL 328
                   +    +  S  K   +   +      K  + Q +  L      +     +DL
Sbjct: 301 HL--KQVSVGMPRLDFSMRKGTELTFKNMRLGLQKLTLQQAKTPLFQLDAIDVQGVDYDL 358


>gi|71738093|ref|YP_273815.1| hypothetical protein PSPPH_1565 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71558646|gb|AAZ37857.1| conserved hypothetical protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 355

 Score = 63.8 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/337 (9%), Positives = 96/337 (28%), Gaps = 24/337 (7%)

Query: 2   LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++R     L  L  L  +++     +P  +     R+    +   +   +  +   + + 
Sbjct: 1   MKRRYSWPLWTLAALVVLLIAVNIALPYLV-----RDYLNDKLADMGDYRGEIT-DVDLA 54

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +    +   K ++I + +            + +   +  L      V       P +NF 
Sbjct: 55  LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTGPQINFV 113

Query: 116 LSSKGVSNWFQRKSTM----DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
                 ++   + +      D +  + L ++ +  GRI   +  S     +    +  S 
Sbjct: 114 DGGSKQNSQTGQGTDWRTQMDKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQVNASI 173

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230
             L  +  +  +        +G                +  +  +    K++   +    
Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESSARFDPFSNFEDFDFKLRATGIQLKK 230

Query: 231 IIDLF---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
           + D     G   +N                       L       + +  + + +  + R
Sbjct: 231 LNDFSSAYGKFDFNAGDGDLVIEAQADKGQLSGYIKPLLRNVDAFNWHQDVENKDKGVFR 290

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
              ++++  S T   N+ +        L+ S +  + 
Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327


>gi|254423699|ref|ZP_05037417.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
 gi|196191188|gb|EDX86152.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
          Length = 1811

 Score = 63.8 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/311 (10%), Positives = 86/311 (27%), Gaps = 26/311 (8%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93
                     + +   +     +       V      I   E       ++ + ++    
Sbjct: 58  PRVTASVDEAINRPTELGDVTGLTFW---GVRLGKSVIPPTETDLSSITVDEIEVKIGLR 114

Query: 94  PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI--LEKIHVKGGRIK- 150
            L+  +I   ++ + +P ++   S  G    F+   + +    +   ++ I ++   +  
Sbjct: 115 SLILQQIAKSEIVLVRPDISLVQSEDGTWTDFELPESEEAESRIKSEIQSIKIEDASVTA 174

Query: 151 --IIDQE-----SDQVYFLSDLNLQISARFLNI---ISPLSIDSIKGSVIAEGTGNFDNK 200
              ID +       ++  + D ++ +              + +   G     G GN + +
Sbjct: 175 VPFIDPDLPAIVPREIVQVRDTDVLVEFFGEGAKEFTFDAAGELDSGDFALNGNGNLNTQ 234

Query: 201 RSAFKITA-NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ---PIYSGVFSVAGD 256
                + A + P     I L   L  ++  +  +L       +      +       +  
Sbjct: 235 TVKAAVRADDVPVTGVNIFLPDSLGLVSGELDGNLTLLTALVDGGLDESVTDIKGVASLQ 294

Query: 257 FSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN 316
             + L  +LSA    +         +V +    L+               V  +E    +
Sbjct: 295 NGEFLASQLSAPVEDIRSQLVFKGQSVTVEDTSLEL----DGVSAIATGDVDWEE--GYD 348

Query: 317 FSENGAESMHD 327
                     D
Sbjct: 349 LRAQIPAVTLD 359


>gi|313497307|gb|ADR58673.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 1273

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 102/295 (34%), Gaps = 19/295 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60
           R  +G+  L +V++    ++   +     ++R D E +A   +G  + V G ++ H    
Sbjct: 15  RWGLGICALLAVLVALYVSLGRELVPLVAEYRADVESKAEQALGLPVHV-GALEGHWSGL 73

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSK 119
            P +  +D+++ +   G+   +++ + +  +    L+  E+R+  + +    L    + +
Sbjct: 74  APVLRVRDLQLGE---GTKALRLDDVMVVPDIWASLTAREVRLARIQLGGLQLILRENEQ 130

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
           G  +        D   +       ++  GRI + D       +  D           + +
Sbjct: 131 GAWSLEGLPKKDDAPLDPADLLQRLRQLGRIDVFDSLVTLHPWQRD-----PLTLTYVSA 185

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKIT---ANFPAKNKAISLKIQLFPLAYPIIIDLF 235
            L   + + ++    T   D +  A  +    +    ++  +   + L    +   +   
Sbjct: 186 GLQAGAKRQALDLRATLP-DGQPLALSLNSRMSAEAWRDGEVEAYVSLPQSDWAHWLPPR 244

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
               W+       G F +     +L    +     RL G +        ++   L
Sbjct: 245 VLGQWHADTLRAGGEFWIGWGKGQLQRAVVRLNAPRLEGAY-AGRKAANLNNLAL 298


>gi|167031960|ref|YP_001667191.1| hypothetical protein PputGB1_0945 [Pseudomonas putida GB-1]
 gi|166858448|gb|ABY96855.1| conserved hypothetical protein [Pseudomonas putida GB-1]
          Length = 1271

 Score = 63.4 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 97/285 (34%), Gaps = 24/285 (8%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60
           R  +G+  L +V++    ++   +     ++R D ER+A   +G  + V G ++      
Sbjct: 13  RWGLGVCALLAVLVALYVSLGRELVPLVAEYRADVERKAEQALGLPVHV-GALEGRWSGL 71

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSK 119
            P +  +D+++ +   G+   +++ + +  +    L+  E+R+  + +    L    + +
Sbjct: 72  APVLRVRDLQLGE---GATALRLDDVMVVPDVWASLTAREVRLARIQLGGLQLILRENEQ 128

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
           GV +        D   +       ++  GR+ + D         S + L    R    ++
Sbjct: 129 GVWDLEGLPKKDDAPLDPADLLQRLRQLGRVDVFD---------SQVTLHPWQRDPLTLT 179

Query: 179 PLSIDSIKGSVIAEGTGNF---DNKRSAFKIT---ANFPAKNKAISLKIQLFPLAYPIII 232
            +S     G             D +  A  +    +    ++  +   + L    +   +
Sbjct: 180 YVSAGLQAGPARQAVDLRATLPDGQPLALTLHSRMSAKAWRDGEVEAYLSLPQSDWSHWL 239

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
                  W        G F V     +L    +      L G + 
Sbjct: 240 PPSLLGQWQADTLRAGGEFWVDWGKGQLQQAVVRLNAPELQGAYA 284


>gi|313107062|ref|ZP_07793264.1| hypothetical protein PA39016_000850003 [Pseudomonas aeruginosa
           39016]
 gi|310879766|gb|EFQ38360.1| hypothetical protein PA39016_000850003 [Pseudomonas aeruginosa
           39016]
          Length = 1276

 Score = 63.4 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 80/253 (31%), Gaps = 16/253 (6%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
           +R+  E +A   +G  + +   +      F P V  ++I++   E      ++  + +  
Sbjct: 43  YRQQLEGEAGKQLGMPVRIA-ELTGSWRGFEPLVVARNIQVGDGEQS---LRLARVRLAP 98

Query: 91  EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149
           + L  LL+ ++R+  + ++   L       G  +      +        L +  ++  RI
Sbjct: 99  DLLGSLLARQVRIGSLELEGLKLTLREGEDGQWSLDGLPHSDKPSDPRKLLQFLLQTQRI 158

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208
            ++D + +            +A  L+ +      S  G    +      D +  A     
Sbjct: 159 SLLDSQLEVAPR------GSAALSLSAVGATLRSSSVGGQSLDARLQLPDGQPLALHAEG 212

Query: 209 NFPAKN---KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
              +++    +    + L    +   +       W   +    G F       K   L  
Sbjct: 213 RIDSEDWPRSSARFYLSLPQSDWAQWLPAGLTQEWTIVRAKAGGDFWFDWRDGKAQRLVA 272

Query: 266 SAKKSRLSGNFKI 278
                +L  ++  
Sbjct: 273 RLLAPQLKASYAA 285


>gi|54294642|ref|YP_127057.1| hypothetical protein lpl1719 [Legionella pneumophila str. Lens]
 gi|53754474|emb|CAH15958.1| hypothetical protein lpl1719 [Legionella pneumophila str. Lens]
          Length = 1273

 Score = 63.4 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 48/289 (16%), Positives = 91/289 (31%), Gaps = 28/289 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           L+++ + L  L  V  V +        W   ++ + E+  T ++G+ + V+         
Sbjct: 12  LKKIWMVLAVLIIVAAVFSSVFRALTPWAKQYKGEVEQHLTSLLGQPVTVQTMETGWYWF 71

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P V  K IRI   +  +    ++ L +       L +  I+   +YID  HL  +    
Sbjct: 72  EPVVKLKHIRI--HDGHNKSIYLDRLIVGVNLFKSLWNWRIQPGVLYIDDMHL-VFREKD 128

Query: 120 GVS-------------NWFQRKSTMDMIHNVILEKIHVKG--GRIKIIDQESDQVYFLSD 164
           G               +    K+   +      EK+ V+     +   D     +  +++
Sbjct: 129 GHWRIEGISSNAMKDTDITPEKTREILDWLAQQEKLIVRHVSAHLHFND---GSLIPVNE 185

Query: 165 LNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
           LNL I  +  N          +  + + +  GN     S  + T      +    L  Q 
Sbjct: 186 LNLSIVNKGGNYKIKGEAKLKQTNATVFQLLGNVQFDPSQIENTNGRFYFSAINVLPAQW 245

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
             L     + L G     +               S    L L     +L
Sbjct: 246 QNLLPKSSMQLEGG----KGNVSLWVDLEKGNISSIQAELRLKRLAWKL 290


>gi|310823659|ref|YP_003956017.1| hypothetical protein STAUR_6433 [Stigmatella aurantiaca DW4/3-1]
 gi|309396731|gb|ADO74190.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1302

 Score = 63.4 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/281 (11%), Positives = 91/281 (32%), Gaps = 8/281 (2%)

Query: 29  WTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSM 88
           W        RQ   ++G  + + G  ++  L    V  + + +      +     +   +
Sbjct: 33  WDAACTLARRQLPELLGLDVGI-GQCELDPLGQ-RVILRGLSLFTPGTETPLFAADMAEV 90

Query: 89  RAEFLPLLSGEIRVFDMYIDQPHLNFYL-SSKGVSNWFQRKSTMDMIHNVILEKIHVKGG 147
           R  F+  LSG++ +  + + +P +   L      S+       +  +  + + ++ + G 
Sbjct: 91  RLGFIRPLSGKLTLELVRVQRPRVVLDLSRPSAKSSQEPASCVLKPLGRLRISRLALTGA 150

Query: 148 RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207
           ++++      +   ++DL+++   R+      +     K  +  EG G    +R      
Sbjct: 151 QVRLA-LPGGRRVEVTDLDVEWKDRWGVAEFDVEAQRGKLWLGPEG-GEVPVRRLVLSGG 208

Query: 208 ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA 267
            +  ++    + + ++      + +         + Q        +         +    
Sbjct: 209 LDVDSELVEFN-RAEVTLDEASVSLSGRVE-SLCDPQLALDAQVFLPLSTLSRTGVLPRP 266

Query: 268 KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308
               L     +S G        ++    N + +    T +S
Sbjct: 267 ASGHLWSRLTVS-GAPAAPHVSMELSASNLAYERFGPTSLS 306


>gi|255002726|ref|ZP_05277690.1| hypothetical protein AmarPR_00115 [Anaplasma marginale str. Puerto
           Rico]
          Length = 898

 Score = 63.4 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 52/365 (14%), Positives = 110/365 (30%), Gaps = 37/365 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKK---IAVKGGIKIHIL 59
           + L  L     VV      VP  +DW   + E   +Q     G     +   G I+  +L
Sbjct: 2   KFLGRLCCCVLVVFAALAFVPYLVDWNAHYGEYVFKQLGAATGSSGAVVKAIGNIEGSLL 61

Query: 60  PFPSVFFKDIRI---DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
             P +  +++ +   +     +    I+ + +  + L +L GE +V  + +         
Sbjct: 62  -LPKLTVRNLYVECSEDAAGCAGTLSIDRMELSVDPLSILMGEPKVRTISLYG----LRT 116

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
           S  G+      ++   + H  I +   V GG +       + V+  S     I +    +
Sbjct: 117 SVGGLVGMVGSQTKSGLGHVRIFDSAVVTGGVVGASASAYNTVHVKS---ATIKSSGSAL 173

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP--LAYPIIIDL 234
                +       +           S  K+  + P  +  +S           +    ++
Sbjct: 174 FGDAVLKIGGTKYLLSSKLERSAAGSTVKVELHSPNTSMVLSGNGAGQGLFDDFGARFEV 233

Query: 235 FG-NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
              NL    +       + + G  +    + LSA      G+         +    +QS 
Sbjct: 234 KTENLSELAQTVAVVTNYRLLGSVASAEEMVLSAGIKAAKGS------GFEVKDLTMQSK 287

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN---DDLKKDD 350
                       +++         S N +    D      F E     ++    D +   
Sbjct: 288 S------ISGTLELACTYAPFCTTSLNFSSIDLD----ALFPEGLGTEQDAYYADFQSSA 337

Query: 351 IQYSV 355
            ++SV
Sbjct: 338 ERFSV 342


>gi|222474760|ref|YP_002563175.1| hypothetical protein AMF_021 [Anaplasma marginale str. Florida]
 gi|222418896|gb|ACM48919.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
          Length = 906

 Score = 63.4 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 52/365 (14%), Positives = 110/365 (30%), Gaps = 37/365 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKK---IAVKGGIKIHIL 59
           + L  L     VV      VP  +DW   + E   +Q     G     +   G I+  +L
Sbjct: 10  KFLGRLCCCVLVVFAALAFVPYLVDWNAHYGEYVFKQLGAATGSSGAVVKAIGNIEGSLL 69

Query: 60  PFPSVFFKDIRI---DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
             P +  +++ +   +     +    I+ + +  + L +L GE +V  + +         
Sbjct: 70  -LPKLTVRNLYVECSEDAAGCAGTLSIDRMELSVDPLSILMGEPKVRTISLYG----LRT 124

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
           S  G+      ++   + H  I +   V GG +       + V+  S     I +    +
Sbjct: 125 SVGGLVGMVGSQTKSGLGHVRIFDSAVVTGGVVGASASAYNTVHVKS---ATIKSSGSAL 181

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP--LAYPIIIDL 234
                +       +           S  K+  + P  +  +S           +    ++
Sbjct: 182 FGDAVLKIGGTKYLLSSKLERSAAGSTVKVELHSPNTSMVLSGNGAGQGLFDDFGARFEV 241

Query: 235 FG-NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
              NL    +       + + G  +    + LSA      G+         +    +QS 
Sbjct: 242 KTENLSELAQTVAVVTNYRLLGSVASAEEMVLSAGIKAAKGS------GFEVKDLTMQSK 295

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN---DDLKKDD 350
                       +++         S N +    D      F E     ++    D +   
Sbjct: 296 S------ISGTLELACTYAPFCTTSLNFSSIDLD----ALFPEGLGTEQDAYYADFQSSA 345

Query: 351 IQYSV 355
            ++SV
Sbjct: 346 ERFSV 350


>gi|56416390|ref|YP_153464.1| hypothetical protein AM025 [Anaplasma marginale str. St. Maries]
 gi|56387622|gb|AAV86209.1| hypothetical protein AM025 [Anaplasma marginale str. St. Maries]
          Length = 906

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 52/365 (14%), Positives = 110/365 (30%), Gaps = 37/365 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKK---IAVKGGIKIHIL 59
           + L  L     VV      VP  +DW   + E   +Q     G     +   G I+  +L
Sbjct: 10  KFLGRLCCCVLVVFAALAFVPYLVDWNAHYGEYVFKQLGAATGSSGAVVKAIGNIEGSLL 69

Query: 60  PFPSVFFKDIRI---DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
             P +  +++ +   +     +    I+ + +  + L +L GE +V  + +         
Sbjct: 70  -LPKLTVRNLYVECSEDAAGCAGTLSIDRMELSVDPLSILMGEPKVRTISLYG----LRT 124

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
           S  G+      ++   + H  I +   V GG +       + V+  S     I +    +
Sbjct: 125 SVGGLVGMVGSQTKSGLGHVRIFDSAVVTGGVVGASASAYNTVHVKS---ATIKSSGSAL 181

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP--LAYPIIIDL 234
                +       +           S  K+  + P  +  +S           +    ++
Sbjct: 182 FGDAVLKIGGTKYLLSSKLERSAAGSTVKVELHSPNTSMVLSGNGAGQGLFDDFGARFEV 241

Query: 235 FG-NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
              NL    +       + + G  +    + LSA      G+         +    +QS 
Sbjct: 242 KTENLSELAQTVAVVTNYRLLGSVASAEEMVLSAGIKAAKGS------GFEVKDLTMQSK 295

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN---DDLKKDD 350
                       +++         S N +    D      F E     ++    D +   
Sbjct: 296 S------ISGTLELACTYAPFCTTSLNFSSIDLD----ALFPEGLGTEQDAYYADFQSSA 345

Query: 351 IQYSV 355
            ++SV
Sbjct: 346 ERFSV 350


>gi|116620232|ref|YP_822388.1| hypothetical protein Acid_1109 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223394|gb|ABJ82103.1| conserved hypothetical protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 526

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/278 (11%), Positives = 84/278 (30%), Gaps = 9/278 (3%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64
           + I +    S+  +    +     W   RE          G+++ + G       P P  
Sbjct: 17  IWIWVTGGLSLSALAVVIIVFAAHWPFTREAVTAALESASGRQVQI-GTFAKTYFP-PGC 74

Query: 65  FFKDIRIDQ--KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
               +R  +           +E LS+RA    L      + ++ +   H+    +  G +
Sbjct: 75  TAGQVRFLRHKHPGAEPIISVEKLSIRATLTGLFGSPTHLSEVRVAGMHMIVAPNVTGEN 134

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                 ++      + + KI   G  ++ I ++  +  ++  +  +++   +   +P+  
Sbjct: 135 RTTVLLNSGPGGKGLAISKITADGAVLEFIHEDRKEPPYVIRVE-RLAVTNVGFGTPMFF 193

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242
            +   +    G    + K   +  +         +S       +       + G      
Sbjct: 194 RATVRNSEPPGVIRAEGKFGPWNPS---DIGATPVSGTYAYDDIDLSFFESILGKGRAWG 250

Query: 243 KQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKIS 279
           +            G      +L+ S    +L+  F  +
Sbjct: 251 QFSDSLSRIRTRGGVEVSGFHLDGSDHAVQLATTFDAT 288


>gi|294338555|emb|CAZ86884.1| conserved hypothetical protein [Thiomonas sp. 3As]
          Length = 1426

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/289 (11%), Positives = 74/289 (25%), Gaps = 27/289 (9%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWT--DFREDFERQATLIVGKKIAVKGGIKIHI-LPF 61
           VL+ L   F +   G  T+   +      FR   E+ ++  +G  + + G I+       
Sbjct: 19  VLLVLTVYFVLG-AGLLTLRYAVLPNAQQFRPWVEQVSSQALGLPVHI-GAIQTQWHGLM 76

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P     D+RID  +      +   +     +  L         + I    L         
Sbjct: 77  PQFALHDVRIDGPQG-QPALQFAAVEATPSWKSLTRLTPTFDQLVIRGADLTVTRPDANH 135

Query: 122 SNW-----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD----QVYFLSDLN 166
                             +          ++I +   R+   +         +  ++ L 
Sbjct: 136 LEIGGIRIALNSSGQSDAAQQFADWLFEQDEILILDSRLTWENAAQQAPPLPLTQVNLLL 195

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL---KIQL 223
                     ++        G +    +     +    + TA+F      +      + L
Sbjct: 196 RNTLLTHRAALTATPPAGFGGPIDLRASFR---QPFFLRHTADFSRWKGTLYGEASNVDL 252

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
             L   + + L                   A   +   +L L     +L
Sbjct: 253 AALQPQLPLTLPATTQTGRGSVRAWAQLDKAAPTAFTADLALRGVALQL 301


>gi|320330010|gb|EFW85997.1| hypothetical protein PsgRace4_10297 [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 990

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 36/331 (10%), Positives = 91/331 (27%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R L         V+V    +  FI          +Q          ++   ++   P+
Sbjct: 1   MSRGLKRTLGSLLTVIVLYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPY 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 58  TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRIELIKPKTELLFEKQG 115

Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168
             N             +         + +++I +  G +   D    Q        LN +
Sbjct: 116 KLNLAQLFKLPASEPAKDEPPGKPFPLRIDEIKLADGYVHFQDMRPSQPIEFLYDTLNFE 175

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           +            +  +      G +   G  +     S   +           P    A
Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L        K    S   +     +      +  ++  +S  +
Sbjct: 236 LPLALEDGVLNFSTAYTLNLAKETELKLTNVSASVAPFALNTPDGRPLVRLQRLDVSETS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + Q +   ++ + D +  
Sbjct: 296 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 326


>gi|71907630|ref|YP_285217.1| hypothetical protein Daro_2001 [Dechloromonas aromatica RCB]
 gi|71847251|gb|AAZ46747.1| hypothetical protein Daro_2001 [Dechloromonas aromatica RCB]
          Length = 564

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 87/289 (30%), Gaps = 23/289 (7%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLS 87
            +  F+   E      +   + + G + + + P P +    +RI    DG     I  + 
Sbjct: 187 PYERFKPALESSLAQYLQAPVKIDG-VGVALFPMPQLKLTGVRIGNPSDG----SIAEVR 241

Query: 88  MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGG 147
           + +    L S   ++  + I    L    ++  V      K  +     VI+ KI +   
Sbjct: 242 ISSPLSLLWSSPFQIPRIDITGAAL----AANRVVAMPLLKGGVTGNGIVIIRKIRIDHS 297

Query: 148 RIKIIDQESDQVYFLSDLNLQISA---------RFLNIISPLSIDSIKGSVIAEGTGNFD 198
           +    D          ++N                  ++      S+  ++  EG   + 
Sbjct: 298 QFIFTD-NLAMTDIYGEINFGADGVVEKATFETNDRGLLIDAQPSSLGIALNIEGRA-WK 355

Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN-LFWNEKQPIYSGVFSVAGDF 257
              +     +            +        +   L G+ L         +G  +++   
Sbjct: 356 PSGTTISFASLQAKGVLQKDRLLVQNIDTTFLGGLLKGDWLLDWSNGLAMAGDGTLSRID 415

Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
           S+ L   L     ++ G+   S   +R +    +S+  NS    + +  
Sbjct: 416 SRKLAATL-VPSLKIEGDMNGSV-RLRSTGRDWESLWANSEATLNTEIT 462


>gi|71733521|ref|YP_276304.1| hypothetical protein PSPPH_4182 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71554074|gb|AAZ33285.1| Domain of Unknown Function (DUF748) family [Pseudomonas syringae
           pv. phaseolicola 1448A]
          Length = 1005

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/331 (11%), Positives = 92/331 (27%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R L         V+V    +  FI          +Q          ++   ++   P+
Sbjct: 16  MSRGLKRTLGSLLTVIVLYSLLGFFILPGVALRITNQQLANYATVPAKLE---RLEFNPY 72

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +   D+ I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 73  TLELTLWDLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRIELIKPKTELLFEKQG 130

Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168
             N             +         + +++I +  G +   D    Q        LN +
Sbjct: 131 KLNLAQLFKLPASEPAKDEPPGKPFPLRIDEIKLADGYVHFQDMRPSQPIEFLYDTLNFE 190

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           +            +  +      G +   G  +     S   +           P    A
Sbjct: 191 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 250

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L        K    S   +     +      +  ++  +S  +
Sbjct: 251 LPLALEDGVLNFSTAYTLNLAKETELKLTNVSASVAPFALNTPDGRPLVRLQRLDVSETS 310

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + Q +   ++ + D +  
Sbjct: 311 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 341


>gi|330875171|gb|EGH09320.1| hypothetical protein Pgy4_07854 [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 845

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/287 (10%), Positives = 87/287 (30%), Gaps = 28/287 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A+  +G  +++ G ++     F
Sbjct: 13  RWGLSLCALVLVLAALYVSLGRQLTPLVAEYRVDVETRASSALGMPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P     D+ + +   GS   +++ + +  +    LL+ ++R+  + +D          +
Sbjct: 72  APVFLAHDVMVGE---GSSAVRLDRVRVVPDLWESLLARQVRIAHLEVDGLQFMLRQDKE 128

Query: 120 GVSNWFQRKSTMDMIHNVI--------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
           G  +        D   +          +  + +   ++ +          L+ +NL ++ 
Sbjct: 129 GNWSVQGLPVRNDSPFDPGQVLEQMQMVSHLSLLDSQVTV-QPFDAAPLTLTYVNLSLAT 187

Query: 172 RFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
              +      +    G              +           K+    +   L    +  
Sbjct: 188 GSYHQRLDARLTLPDGQPFALNVRSRIQASQ----------WKDGEADVYASLPQSDWAK 237

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
            +       W   +    G   ++     + +         + G + 
Sbjct: 238 WLPKSLTREWTLSKLQAGGELWMSWGKGTVQSATARLNAPHVKGVYA 284


>gi|330958027|gb|EGH58287.1| hypothetical protein PMA4326_05546 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 1271

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 89/302 (29%), Gaps = 29/302 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + +  L  ++     ++   +     ++R D E +A+  +G  +++ G ++     F
Sbjct: 13  RWGLSICALILILAALYVSLGRQLTPLVAEYRVDVESRASTALGMPLSI-GRLEGSWNRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P V   D+ + +   GS   +++ + +  +    LL+ E+R+  + +D           
Sbjct: 72  SPVVLAHDVMVGE---GSSALRLDRVRVVPDLWASLLAREVRIDHLEVDGLQFILKQGED 128

Query: 120 GVSNWFQRKSTMDMIHNV--------ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
           G           D   N          +  + +   ++ +          L+ +N+ ++ 
Sbjct: 129 GSWAVQGLPIRDDSPFNPEQVLNQMQRVAHLSLLDSQVTV-QPFDAAPLTLTYVNVSLTT 187

Query: 172 RFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
              +      +    G  +           R           K     +   L    +  
Sbjct: 188 GSYHQRLDARVTLPDGQPLALNMRSRVQASR----------WKEGEADVYASLPQSDWGK 237

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
            +       W        G   ++     L +        ++ G +        +    L
Sbjct: 238 WLPKSLTREWTLSTLQAGGEVWMSWGKGTLQSATARLNAPKIKGVYAARKPT-TVDNLAL 296

Query: 291 QS 292
            +
Sbjct: 297 NA 298


>gi|320322521|gb|EFW78614.1| hypothetical protein PsgB076_21372 [Pseudomonas syringae pv.
           glycinea str. B076]
          Length = 990

 Score = 63.0 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/331 (11%), Positives = 89/331 (26%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R L         V+V    +  FI          +Q          ++   ++   P+
Sbjct: 1   MSRGLKRTLGSLLTVIVLYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPY 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 58  TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRIELIKPKTELLFEKQG 115

Query: 121 VSNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQ 168
             N             +         + +++I +  G +   D    Q        LN +
Sbjct: 116 KLNLAQLFKLPASEPAKDEPPGKPFPLRIDEIKLADGYVHFQDMRPSQPIEFLYDTLNFE 175

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAIS----- 218
           +            +  +      G +   G  +     S   +                 
Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 235

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS---GN 275
           L + L             NL    +  + +   SVA       +    A+  RL     +
Sbjct: 236 LPLALEDGVLNFSTAYTLNLAKETELKLTNVSASVAPFALNTPDGRPLARLQRLDVSETS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + Q +   ++ + D +  
Sbjct: 296 VDLAKQLVTVGKIRSQKLETWAAREADGQLD 326


>gi|304409792|ref|ZP_07391412.1| hypothetical protein Sbal183DRAFT_1248 [Shewanella baltica OS183]
 gi|307304149|ref|ZP_07583902.1| hypothetical protein Sbal175DRAFT_1961 [Shewanella baltica BA175]
 gi|304352310|gb|EFM16708.1| hypothetical protein Sbal183DRAFT_1248 [Shewanella baltica OS183]
 gi|306913047|gb|EFN43470.1| hypothetical protein Sbal175DRAFT_1961 [Shewanella baltica BA175]
          Length = 1156

 Score = 63.0 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 47/380 (12%), Positives = 114/380 (30%), Gaps = 53/380 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR ++       S V      +P  I           + + ++G+ + + G I+I+    
Sbjct: 19  LRVLVYLTAVYLSYVCTLGLILPYAITT-----LAPEKLSALLGRPVTL-GDIRINPF-N 71

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL-SSK 119
             V    + I +K+     + +  +     F   + +    + +++I  P+ +      K
Sbjct: 72  FKVAIDQLAIKEKD-EKPFAGLAQVQFEVNFWQSVFNRAAVIENIHIQAPYAHIIRVEKK 130

Query: 120 GVSNW-----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           G + +                     +       V+L +  +  G+    D+ +      
Sbjct: 131 GKAGFNFDDILQTLNEHSSASTETTPAETSAPVRVLLSQFVLDAGQFNFDDKITHAQVNY 190

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
            ++NL++S       +   + ++  SV      N           ++    + +  + IQ
Sbjct: 191 PNINLKLSQLD----TEYLMSALSASVAPATKANKTEANPTPNAQSSSDTGSGSQVMPIQ 246

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
               A  +  D  G +          G F +          ++   K +L+  ++  D  
Sbjct: 247 HNHYAIQLSDDHAGEIS-------LQGQFQLFPLKVAG---DVHIAKLKLTPLWRFIDDQ 296

Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE-----SMHDLNETDFFEEE 337
                   +  L +       + +V   E   L  + N  +        +  E    +  
Sbjct: 297 -------FKPALTDGEITAKTQYQVDFAENGELQVTSNNGQFIVEKLNFNDQERSVVKLP 349

Query: 338 EKKNKNDDLKKDDIQYSVNK 357
                   +     Q  +NK
Sbjct: 350 IFALDGISMDLKQQQVHINK 369


>gi|146302053|ref|YP_001196644.1| AsmA family protein [Flavobacterium johnsoniae UW101]
 gi|146156471|gb|ABQ07325.1| AsmA family protein [Flavobacterium johnsoniae UW101]
          Length = 939

 Score = 63.0 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 47/385 (12%), Positives = 116/385 (30%), Gaps = 35/385 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI---LP 60
           ++L   G + +  ++    +   +       + ++ A   +  K+      K+      P
Sbjct: 11  KILKWTGIVIA-GILLLLFLIPLLFPGKVASEVKKIANERLDTKLEFS-KSKLSFFTHFP 68

Query: 61  FPSVFFKDIRIDQ--KEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLS 117
             +V   DI +            K + ++        +   E+++  +Y+    +N  ++
Sbjct: 69  SLTVSLDDISMTGSKPFGNDTLLKADQVAFGINLKRLIFDSEVKINKLYVSNALINVMVN 128

Query: 118 SKGVSNWF------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
            KG +N+             +  +  +    + LE+I ++   +K  D+ +  +      
Sbjct: 129 EKGQANYNIYVAPEDRKNEKEDPNAPEEGTAIKLERIDLENCHVKYNDRSAKVLVDAKGF 188

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
           N        + I  L+ D+   ++          ++ A +          A+S  +Q   
Sbjct: 189 NYIGKGNLSDDIFDLNTDAKIDTLDFYYNRTAYLRKKAVRADLITRINTHALSFILQKNE 248

Query: 226 LA-YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
           L    + +   G           +   +      K L   LS                + 
Sbjct: 249 LQINKLPLKFTGLFTILRDGYKINIKAASENTTVKDL---LSVMPP----------EYLT 295

Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344
                  S   +          VS+ ++  L F+    +             + + + N 
Sbjct: 296 WLEKTEISGKSDLVLSFKGDYNVSKKQKPNLAFNLKIKDGAVSYQNAPVPLTDFQMDLNA 355

Query: 345 DL-KKDDIQYSVNKKEEKDNSHDKE 368
            L   D  Q  VN +  +    +K+
Sbjct: 356 MLPSLDTEQLLVNLRTLRFKVGEKD 380


>gi|104780295|ref|YP_606793.1| hypothetical protein PSEEN1079 [Pseudomonas entomophila L48]
 gi|95109282|emb|CAK13979.1| conserved hypothetical protein [Pseudomonas entomophila L48]
          Length = 1270

 Score = 63.0 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 94/300 (31%), Gaps = 25/300 (8%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60
           R  +G+  L +V++    ++   +     ++R D E +A   +G  + V G ++      
Sbjct: 13  RWGLGICALLAVLVALYVSLGRQLVPLVAEYRVDAELKAEQALGMPVHV-GALEGRWSGL 71

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSK 119
            P +  +D+++ +        +++ + +  +    L   E+R+  + +    L   L   
Sbjct: 72  APVLRVRDLQLGEGAAS---LRLDDVKLVPDLWASLKAREVRLARIQLAG--LQLILRED 126

Query: 120 GVSNWFQR--KSTMDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSDLNLQISARFLNI 176
           G  +W         D   +       ++  GRI + D +         L+          
Sbjct: 127 GQGSWALEGLPHKDDAPFDPADALKRLRQLGRIDLFDSQVT-------LHPWQRDPLTLT 179

Query: 177 ISPLSIDSIKGSVIAEGTGNF-DNKRSAFKI---TANFPAKNKAISLKIQLFPLAYPIII 232
              L + +       +      D +  A  +    +    +   +   + L    +   +
Sbjct: 180 YVSLGLQAGASRQRLDLRATLPDGQPLAMSLDSRASARAWREGRLQAYLSLPQSDWARWL 239

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                  W        G F +  +  +L    +     +L G +        +    L +
Sbjct: 240 PPRLLGQWQASTLRAGGEFWIDWNKGQLQQAMVRLNAPQLKGAY-AERKAATLDNLALSA 298


>gi|116619874|ref|YP_822030.1| hypothetical protein Acid_0746 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223036|gb|ABJ81745.1| protein of unknown function DUF490 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 1364

 Score = 63.0 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 24/250 (9%), Positives = 64/250 (25%), Gaps = 20/250 (8%)

Query: 17  LVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKG-GIKIHILPFPSVFFKDIRI--DQ 73
           +V       F D    R           G ++ ++   +            +D  I   +
Sbjct: 26  IVFVLQSSWFFD--KVRAKIVSSVETATGGRVEIRSFRMDWR---HMRAEVRDFVIHGTE 80

Query: 74  KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM-- 131
                       +++  + L +L   + +  + +  P +   ++  G +N    K     
Sbjct: 81  PAGKPPLFHASSVAVGLKLLTILKPSVDIRYLNVADPQVYLIIAPDGSTNIPAPKLKSTA 140

Query: 132 -----DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186
                + I  + +    ++ G  ++    S   +     NL ++  +             
Sbjct: 141 KTSTVEDILKLAIGTFTLERGSFEVE-ARSRTPFDARGENLNLNLAYDRAGPRYRGTLAI 199

Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
             +        D     F +      +   I++            +   G +      P 
Sbjct: 200 QPLHLSYD---DYGPVPFDVRLGLTLERNRIAVD-TGRLATSATQVTFSGAVEDLAAAPR 255

Query: 247 YSGVFSVAGD 256
            S  +     
Sbjct: 256 GSFRYEARAA 265


>gi|330981099|gb|EGH79202.1| hypothetical protein PSYAP_21407 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 994

 Score = 63.0 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/331 (11%), Positives = 95/331 (28%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R L         V+     +  FI          +Q          ++   ++   PF
Sbjct: 1   MSRGLKRTLGSLLAVIALYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPF 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 58  TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRVELIKPRTELLFDKQG 115

Query: 121 VSNWFQRKSTMDM----------IHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166
             N  Q                    + +++I + GG +   D    Q         D  
Sbjct: 116 KLNLAQLFKLPASEPAKDEPATKPFPLRIDEIKLAGGYVHFQDLRPSQPIEFLYDALDFE 175

Query: 167 LQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           L+  +      + +++ +     G +   G  +     S   +           P    A
Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPIASEGTLKVTDSKMKLWWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L  +     K    S   +     +      +  ++  +S  +
Sbjct: 236 LPLALEDGVLNFSTAYTLNLSKETELKLTNVSASVAPFVLNAPDGRPLVRLQRLDVSETS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + Q +   ++ + D +  
Sbjct: 296 VDLAKQLVTVGKVRSQKLETWAAREADGQLD 326


>gi|289676562|ref|ZP_06497452.1| hypothetical protein PsyrpsF_25004 [Pseudomonas syringae pv.
           syringae FF5]
          Length = 355

 Score = 63.0 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/337 (9%), Positives = 97/337 (28%), Gaps = 24/337 (7%)

Query: 2   LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++R     L  L  L  +++     +P  +     R+    +   +   +  +   + + 
Sbjct: 1   MKRRYSWPLWTLAALIVLLVAVNIALPYLV-----RDYLNDKLADMGDYRGEIT-DVDLA 54

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +    +   K ++I + +            + +   +  L      V       P +NF 
Sbjct: 55  LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTGPQINFV 113

Query: 116 LSSKGVSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
                  +   + +        +  + L ++ +  GRI   +  S     +    +  S 
Sbjct: 114 DGGSKQDSQTGQGTDWRTQMNKLLPITLNELRIDDGRITFNNFNSTPKVKIEADQVNASI 173

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230
             L  +  +  +        +G                +  +  +    K++   +    
Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESSARFDPFSNFEDFDFKLRATGIQLKK 230

Query: 231 IIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
           + D       ++        V     D  +L        ++    N++    N     ++
Sbjct: 231 LNDFSSAYGKFDFNAGDGDVVIEAQADKGQLKGYIKPLLRNVDVFNWQQDVENKDKGVFR 290

Query: 290 --LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
              ++++  S T   N+ +        L+ S +  + 
Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327


>gi|330862857|emb|CBX72998.1| uncharacterized protein yhdP [Yersinia enterocolitica W22703]
          Length = 916

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 105/313 (33%), Gaps = 23/313 (7%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66
            +  + ++++ G   +   I   D+R     +   I G  + V G ++     F P++  
Sbjct: 7   TIIVVVALLVSGLRMMLPLI--NDYRPQIVAKIQSISGIPLEV-GFMQGTWETFGPTLEL 63

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSN-- 123
           +DIR    +      +++ +++  +    LL    +  DM   Q  L+ + +     +  
Sbjct: 64  RDIRAKLPKAD---WQVQRVTLALDVWQSLLHRRWQFRDMTFYQLQLDLHTTLDRQQSNG 120

Query: 124 WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSI 182
                ST+  I    L+   ++  RI  +     +    +  L    S+        +S+
Sbjct: 121 NSFEASTITDIFLRQLDHFDLRNSRISFLTPSGPRAELEIPQLTWLNSSSRHRAEGQISL 180

Query: 183 DSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
            +I G   +     +  + +                ++ +Q   +     I  + +    
Sbjct: 181 STINGQHGVLMVRMDLHDNQGILS----------NGTVYMQADNIDVKPWISRWLHTNTG 230

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
            +   +S    ++    ++ +  +  ++ + +   +     + +    L+     +    
Sbjct: 231 LESAEFSLAAWLSIKSGEIYSGNVLLRQGQANWTVEGESHQLAVDNLVLEGSRHGNGWQI 290

Query: 302 DN-KTKVSQDEEN 313
           D  +  +  D + 
Sbjct: 291 DAPELSLKTDGQP 303


>gi|146281407|ref|YP_001171560.1| hypothetical protein PST_1021 [Pseudomonas stutzeri A1501]
 gi|145569612|gb|ABP78718.1| predicted membrane protein [Pseudomonas stutzeri A1501]
          Length = 1266

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/284 (10%), Positives = 82/284 (28%), Gaps = 20/284 (7%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60
           R++     F   +  +        +    ++R + + +    +   + + G ++      
Sbjct: 13  RQLFWVAAFGLILAALYVSLGRQLVPLVAEYRTELQERVRTALDMPVTL-GRLEGRWEGL 71

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P +   D+ + + +      +++ +++  +    L +   R+  +     H++      
Sbjct: 72  APRLLAHDVLLGEGDS---AMRLDRIAVVPDLAGSLWARSWRLSSLEFSGVHVSVLEGED 128

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL--QISARFLNII 177
           G           D       +KI      ++ +          S + L     +      
Sbjct: 129 GKWQVKGLPERDDAPP-PDPQKI------LEALQHIRGLALLDSQITLEPFGDSPLTLSY 181

Query: 178 SPLSIDSIKGSVIAEGTGNF-DNKRSAFKITANFP---AKNKAISLKIQLFPLAYPIIID 233
           + LS+ +    +  +G     D +  A ++ A             L + L    +   + 
Sbjct: 182 TDLSLRTDGNRLRLDGRSVLPDGQPLALRLNARVQPQRWAQAEAQLYLSLPQSDWAAWLP 241

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
                 W  +     G   +     +L    L     RL   + 
Sbjct: 242 GRLTGAWQLQTAQLGGELWLRWKAQQLERAVLRLNAPRLRAAYA 285


>gi|153000201|ref|YP_001365882.1| hypothetical protein Shew185_1674 [Shewanella baltica OS185]
 gi|151364819|gb|ABS07819.1| protein of unknown function DUF748 [Shewanella baltica OS185]
          Length = 1154

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 45/384 (11%), Positives = 109/384 (28%), Gaps = 63/384 (16%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR +        S V      +P  I           + + ++G+ + + G I+I+    
Sbjct: 19  LRVLAYLTAVYLSYVCTLGLILPYAITT-----LAPEKLSALLGRPVTL-GDIRINPF-N 71

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL-SSK 119
             V    + I +K+     + +  +     F   + +  + + +++I  P+ +      K
Sbjct: 72  FKVEIDQLAIKEKD-EKPFAGLAQVQFEVNFWQSVFNRAVVIENIHIQAPYAHIIRVEKK 130

Query: 120 GVSNW-----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           G + +                     +       V+L +  +  G+    D+ +      
Sbjct: 131 GKAGFNFDDILQTLNEHSSASTETTPAEASAPVRVLLSQFVLDAGQFNFDDKITHAQVNY 190

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
            ++NL++S      +      S+  +  A                            K +
Sbjct: 191 PNINLKLSQLDTEYLMSALSASVAPATKAN---------------------------KTE 223

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
             P          G+     +   Y+   S        L  +      +++G+  I+   
Sbjct: 224 ANPTPNAQSTSDTGSQVMPVQHNHYAIQLSDNHAGEISLQGQFQLFPLKVAGDVHIAKLK 283

Query: 283 V----RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE-----SMHDLNETDF 333
           +    R    + +  L +       + +V   E   L  + N  +        +  E   
Sbjct: 284 LPPLWRFIDDQFKPALTDGEITAKTQYQVDLAENGELQVTSNNGQFIVEKLNFNDQERSV 343

Query: 334 FEEEEKKNKNDDLKKDDIQYSVNK 357
            +          +     Q  +NK
Sbjct: 344 VKLPIFALDGITMDLKQQQVRINK 367


>gi|320327773|gb|EFW83781.1| hypothetical protein PsgRace4_23330 [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330877550|gb|EGH11699.1| hypothetical protein Pgy4_11262 [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 355

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/337 (9%), Positives = 96/337 (28%), Gaps = 24/337 (7%)

Query: 2   LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++R     L  L  L  +++     +P  +     R+    +   +   +  +   + + 
Sbjct: 1   MKRRYSWPLWTLAALVVLLIAVNIALPYLV-----RDYLNDKLADMGDYRGEIT-DVDLA 54

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +    +   K ++I + +            + +   +  L      V       P +NF 
Sbjct: 55  LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTGPQINFV 113

Query: 116 LSSKGVSNWFQRKSTM----DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
                 ++   + +      D +  + L ++ +  GRI   +  S     +    +  S 
Sbjct: 114 DGGSKQNSQTGQGTDWRTQMDKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQVNASI 173

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230
             L  +  +  +        +G                +  +  +    K++   +    
Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESSARFDPFSNFEDFDFKLRATGIQLKK 230

Query: 231 IIDLF---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
           + D     G   +N                       L       + +  + + +  + R
Sbjct: 231 LNDFSSAYGKFDFNAGDGDLVIEAQADKGQLSGYIKPLLRNVDVFNWHQDVENKDKGVFR 290

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
              ++++  S T   N+ +        L+ S +  + 
Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327


>gi|301063818|ref|ZP_07204311.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300442080|gb|EFK06352.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 593

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 38/323 (11%), Positives = 95/323 (29%), Gaps = 27/323 (8%)

Query: 21  FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFE 80
             +   I    F+     Q +   G ++     I +      ++  ++ R+         
Sbjct: 25  ILLNFLIHTEPFQRYLLEQLSQATGYELR-AKKISLSFADGIAIRARNFRVYAPSGDEK- 82

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS------KGVSNWFQRKSTM--D 132
           +    + M      LL G I   ++ I +P +            +G     ++       
Sbjct: 83  AGASRIRMDFSLRDLLRGRILPKNLAIIEPEIYLTAGKERGLSVQGKGPLLEKSYARLLA 142

Query: 133 MIHNVILEK--IHVKGGRIKIIDQ-----ESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
               V LE   + ++     + D         +   + +  L  +A +    +P S   +
Sbjct: 143 AFPLVSLENAIVTMEPSGFTLKDLNVRLVRKSKEPVVLNGTLYGTAIYQGTTAPFSASGL 202

Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
                  G  + D + S  ++        + +S+K     +   I   L G L  +    
Sbjct: 203 LMEDPENG-LSIDGRCSIREMLLTRLLLPEELSIKNGTVGINAAIKGSLDGILSIDGSLL 261

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
                F +  D                + ++   D  ++I  +++Q    N +   +  +
Sbjct: 262 FRDLNF-LLIDDGDKKAFSFKQLAVPFNASYA--DAVLKIPSFQVQ----NKAFTLNCTS 314

Query: 306 KVSQDE--ENLLNFSENGAESMH 326
            ++  +  +  L+          
Sbjct: 315 TINFTKPHDPHLDLKVKSPFMTL 337


>gi|307610454|emb|CBX00025.1| hypothetical protein LPW_17811 [Legionella pneumophila 130b]
          Length = 754

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 89/288 (30%), Gaps = 28/288 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++ + L  L  V  V +        W   ++ + E+  T ++G+ + V+          
Sbjct: 13  KKIWMVLAVLIIVAAVFSSVFRALTPWAKQYKGEVEQHLTSLLGQPVTVQTMETGWYWFE 72

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           P V  K IRI   +  +    ++ L +       L +  I+   +YID  HL  +    G
Sbjct: 73  PVVKLKHIRI--HDGHNKSIYLDRLIVGVNLFKSLWNWRIQPGVLYIDDMHL-VFREKDG 129

Query: 121 VS-------------NWFQRKSTMDMIHNVILEKIHVKG--GRIKIIDQESDQVYFLSDL 165
                          +    K+   +      EK+ V+     +   D     +  +++L
Sbjct: 130 HWCIEGISRNAMKDTDITPEKTREILDWLAQQEKLIVRHVSAHLHFND---GSLIPVNEL 186

Query: 166 NLQISARFLNIISPLSID-SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
           NL I  +  N             + + +  GN     S  K T      +    L  Q  
Sbjct: 187 NLSIVNKGGNYKIKGEARLEQTNATVFQLLGNVQFDPSQIKNTNGRFYFSAINVLPAQWQ 246

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
            L     + L G     +               S    L L     +L
Sbjct: 247 NLLPKSSMQLEGG----KGNVSLWVDLEKGNISSIQAELRLKRLAWKL 290


>gi|332531150|ref|ZP_08407063.1| hypothetical protein HGR_14359 [Hylemonella gracilis ATCC 19624]
 gi|332039257|gb|EGI75670.1| hypothetical protein HGR_14359 [Hylemonella gracilis ATCC 19624]
          Length = 1508

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 53/356 (14%), Positives = 108/356 (30%), Gaps = 64/356 (17%)

Query: 18  VGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI----HILPFPSVFFKDIRI 71
                +  FI       R   E QAT ++G+ + + G I+      +LP  S   +D+ +
Sbjct: 39  AVWAGLNFFIVPRIDSLRPMLELQATQMLGRPLRI-GSIRAETDGRLLP--SFELRDVML 95

Query: 72  DQKE-----------------DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            +                     +   ++  + ++     LL   +    + IDQP L  
Sbjct: 96  YEGAETPVPGATADGGDRGDVSAAPVLRLPRVHVQLSLHALLR--LGFDQLVIDQPDLTV 153

Query: 115 YLSSKGVSNWFQRKSTMDMI-------HNVILEKIHVKGGRIKIIDQESD-QVYFLSDLN 166
             ++ G       +               +   +  + GG ++ ID+        L  L 
Sbjct: 154 RRAADGRIYIAGIEVPQQSGGDGRLADWVLSQTEWRITGGSVRWIDETRPVPPVALQGLE 213

Query: 167 LQISARFLNIISPLSIDS---IKGSVIAEGTGN---FDNKRSAFKITANFPAKNKA-ISL 219
            ++          L + +   + G V   G      F  + S +++           + L
Sbjct: 214 FRLRNGARTHEWRLDVQAPDELGGRVSLRGQLREPLFFARPSEWQLWDGELYAELERVDL 273

Query: 220 KIQLFPLAYPIIID----------LFGNLFWNEK-QPIYSGVFSVAGDFSKLLNLELSAK 268
                 +A+P  +           L   +   E      +   ++ G   KL     +  
Sbjct: 274 DALKQRIAWPTALTQVHLEGGSTALRAWVDVEEGHISSVTADVALGGVLLKLGPDLPALD 333

Query: 269 KSRLSGNF----------KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314
            +RL+G F           + DG+  +S   L+    +         +VS  E   
Sbjct: 334 VNRLAGRFGARWGTRMGGSLQDGSYEVSTEGLRFDTRDGLVWSSGDARVSLAEYRP 389


>gi|330950298|gb|EGH50558.1| hypothetical protein PSYCIT7_02612 [Pseudomonas syringae Cit 7]
          Length = 354

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 38/331 (11%), Positives = 95/331 (28%), Gaps = 31/331 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R L         V+     +  FI          +Q          ++   ++   PF
Sbjct: 1   MSRGLKRTLGSLLAVIALYSLLGFFILPGVALRIANQQLANYATVPAKLE---RLEFNPF 57

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +    + I     G  +   E L    +   L +  + +  + + +P        +G
Sbjct: 58  TLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRVELIKPRTELLFDKQG 115

Query: 121 VSNWFQRKSTMDM----------IHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLN 166
             N  Q                    + +++I + GG +   D    Q         D  
Sbjct: 116 KLNLAQLFKLPASEPTKDEPATKPFPLRIDEIKLAGGYVHFQDLRPSQPIEFLYDALDFE 175

Query: 167 LQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANF-------PAKNKA 216
           L+  +      + +++ +     G +   G  +     S   +           P    A
Sbjct: 176 LKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPITSEGTLKVTDSKMKLWWPYVRDA 235

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GN 275
           + L ++   L +     L  +     K    S   +     +      +  ++  +S  +
Sbjct: 236 LPLALEDGVLNFSTAYTLNLSKKTELKLTNVSASIAPFALNAPDGRPLVRLQRLDVSETS 295

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             ++   V + + + Q +   ++ + D +  
Sbjct: 296 VDLAKQLVTVGKVRSQKLETWAARETDGQLD 326


>gi|229496696|ref|ZP_04390410.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
 gi|229316593|gb|EEN82512.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
          Length = 1634

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/345 (12%), Positives = 103/345 (29%), Gaps = 39/345 (11%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDF---ERQATLIVGKKIAVKGGIKIHILPFPS 63
           + +  L +   +    + L       R      E+Q     G  + + G + +      +
Sbjct: 41  VVVALLLAPFALIFLLISLLYLPPVQRGIARFAEQQVKKKTGIDLTI-GDLGLRF--PLT 97

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
           +  +DIR    E       +  L       PL +G+I    +  +        S++ +  
Sbjct: 98  LSLRDIRAISPEG-DTLVALSRLDTDIPLFPLFNGQIETPRLQAEGVSFCIPDSARTMII 156

Query: 124 WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE----------------SDQVYFLSDLNL 167
               +        V L +  V  G + + D                        +  ++L
Sbjct: 157 GGGAQHLEIAAVAVNLSQQTVDAGALLLKDGGFSLYSVDTIKNPNPTPVKWKIAIDRIDL 216

Query: 168 QISARFLNIISP-LSIDSIKGSVIAEG------TGNFDNKRSAFKITANFPAKNKAISLK 220
           Q +   L +    L + +       EG          +  R + +  +   A++  +   
Sbjct: 217 QRAKVDLTMPFDSLYVRADIDKGTMEGFSYDIEALRLEANRVSLRAKSGSYARDARLPST 276

Query: 221 IQLF-PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
             +     +   +++ G         +      +A      L     A+ + +SG+F + 
Sbjct: 277 PYVDYTHLFGYDMEVDGT------NLVQQKTLLMAEVSHLSLREHSGARINDVSGSFFMQ 330

Query: 280 DGNVRISRYKLQS--ILPNSSTDEDNKTKVSQDEENLLNFSENGA 322
           DG + +   +L +     + S        +++D   +L       
Sbjct: 331 DGLIELEEMQLTTPYSRADGSLRIPLSIFIAKDTTAILRADLRAQ 375


>gi|322436234|ref|YP_004218446.1| protein of unknown function DUF490 [Acidobacterium sp. MP5ACTX9]
 gi|321163961|gb|ADW69666.1| protein of unknown function DUF490 [Acidobacterium sp. MP5ACTX9]
          Length = 1496

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/253 (12%), Positives = 73/253 (28%), Gaps = 17/253 (6%)

Query: 35  DFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI--DQKEDGSFESKIEGLSMRAEF 92
           +         G ++ + G I  ++    ++    + I   +    +     + + +R + 
Sbjct: 65  EVVSVLEDSTGGRVDL-GRITFNLW-QLAIEADGLVIHGLEGPGEAPYLSADKILVRVKI 122

Query: 93  LPLLSGE--------IRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV 144
              L           + +  + I+QPH++  +   G +N    K T      VI   + +
Sbjct: 123 FDFLKRTTGTGKRTYVGLNLLRIEQPHVHLIIDKDGKTNQPVPKHTTPSNEPVIDTLLDL 182

Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204
           K  ++++++  +         NL        +    S D    ++          K    
Sbjct: 183 KAQKVELVNGLAALNDKAIPFNLAAKDLQAEVHYIASSDRYGATIDLNDLVTEMQKEPEA 242

Query: 205 KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW-----NEKQPIYSGVFSVAGDFSK 259
           +   +  A+    +  ++ F        DL            E      G   +      
Sbjct: 243 QSKLHLVAEIGRDAADLKEFSFHTGATSDLTATASLKNFSSPEWSTKLDGSLELKQIQVL 302

Query: 260 LLNLELSAKKSRL 272
                L A    L
Sbjct: 303 SGVDGLDAGSVEL 315


>gi|52841982|ref|YP_095781.1| transmembrane protein [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|296107346|ref|YP_003619046.1| transmembrane protein [Legionella pneumophila 2300/99 Alcoy]
 gi|52629093|gb|AAU27834.1| transmembrane protein [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|295649247|gb|ADG25094.1| transmembrane protein [Legionella pneumophila 2300/99 Alcoy]
          Length = 1273

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 89/288 (30%), Gaps = 28/288 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++ + L  L  V  V +        W   ++ + E+  T ++G+ + V+          
Sbjct: 13  KKIWMVLAVLIIVAAVFSSVFRALTPWAKQYKGEVEQHLTSLLGQPVTVQTMETGWYWFE 72

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           P V  K IRI   +  +    ++ L +       L +  I+   +YID  HL  +    G
Sbjct: 73  PVVKLKHIRI--HDGHNKSIYLDRLIVGVNLFKSLWNWRIQPGVLYIDDMHL-VFREKDG 129

Query: 121 VS-------------NWFQRKSTMDMIHNVILEKIHVKG--GRIKIIDQESDQVYFLSDL 165
                          +    K+   +      EK+ V+     +   D     +  +++L
Sbjct: 130 HWCIEGISRNAMKDTDITPEKTREILDWLAQQEKLIVRHVSAHLHFND---GSLIPVNEL 186

Query: 166 NLQISARFLNIISPLSID-SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
           NL I  +  N             + + +  GN     S  K T      +    L  Q  
Sbjct: 187 NLSIVNKGGNYKIKGEARLEQTNATVFQLLGNVQFDPSQIKNTNGRFYFSAINVLPAQWQ 246

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
            L     + L G     +               S    L L     +L
Sbjct: 247 NLLPKSSMQLEGG----KGNVSLWVDLEKGNISSIQAELRLKRLAWKL 290


>gi|148359299|ref|YP_001250506.1| transmembrane protein [Legionella pneumophila str. Corby]
 gi|148281072|gb|ABQ55160.1| transmembrane protein [Legionella pneumophila str. Corby]
          Length = 1273

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 89/288 (30%), Gaps = 28/288 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++ + L  L  V  V +        W   ++ + E+  T ++G+ + V+          
Sbjct: 13  KKIWMVLAVLIIVAAVFSSVFRALTPWAKQYKGEVEQHLTSLLGQPVTVQTMETGWYWFE 72

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           P V  K IRI   +  +    ++ L +       L +  I+   +YID  HL  +    G
Sbjct: 73  PVVKLKHIRI--HDGHNKSIYLDRLIVGVNLFKSLWNWRIQPGVLYIDDMHL-VFREKDG 129

Query: 121 VS-------------NWFQRKSTMDMIHNVILEKIHVKG--GRIKIIDQESDQVYFLSDL 165
                          +    K+   +      EK+ V+     +   D     +  +++L
Sbjct: 130 HWCIEGISRNTMKDTDITPEKTREILDWLAQQEKLIVRHVSAHLHFND---GSLIPVNEL 186

Query: 166 NLQISARFLNIISPLSID-SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
           NL I  +  N             + + +  GN     S  K T      +    L  Q  
Sbjct: 187 NLSIVNKGGNYKIKGEARLEQTNATVFQLLGNVQFDPSQIKNTNGRFYFSAINVLPAQWQ 246

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
            L     + L G     +               S    L L     +L
Sbjct: 247 NLLPKSSMQLEGG----KGNVSLWVDLEKGNISSIQAELRLKRLAWKL 290


>gi|123443981|ref|YP_001007951.1| hypothetical protein YE3800 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090942|emb|CAL13824.1| putative exported protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 1291

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/321 (12%), Positives = 105/321 (32%), Gaps = 23/321 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           L R++   G    VV+    +    +     D+R     +   I G  + V G ++    
Sbjct: 4   LPRIMFATGATIIVVVALLVSGLRMMLPLINDYRPQIVAKIQSISGIPLEV-GFMQGTWE 62

Query: 60  PF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS 117
            F P++  +DI     +      +++ +++  +    LL    +  DM   Q  L+ + +
Sbjct: 63  TFGPTLELRDISAKLPKAD---WQVQRVTLALDVWQSLLHRRWQFRDMTFYQLQLDLHTT 119

Query: 118 SKGVSN--WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFL 174
                N       ST+  I    L+   ++  RI  +     +    +  L    SA   
Sbjct: 120 LDRQQNNSNSFEASTITDIFLRQLDHFDLRNSRISFLTPSGPRAELEIPQLTWLNSASRH 179

Query: 175 NIISPLSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
                +S+ +I G   +     +  + +                ++ +Q   +     I 
Sbjct: 180 RAEGQISLSTINGQHGVLMVRMDLHDNQGILS----------NGTVYMQADNIDVKPWIS 229

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
            + +     +   +S    ++    ++ +  +  ++ + +   +     + +    L+  
Sbjct: 230 RWLHTNTGLESAEFSLAAWLSIKSGEIYSGNVLLRQGQANWTVEGESHQLAVDNLVLEGS 289

Query: 294 LPNSSTDEDN-KTKVSQDEEN 313
              +    D  +  +  D + 
Sbjct: 290 RHGNGWQIDAPQLSLKTDGQP 310


>gi|307555331|gb|ADN48106.1| conserved membrane protein [Escherichia coli ABU 83972]
          Length = 1266

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|26249826|ref|NP_755866.1| hypothetical protein c4000 [Escherichia coli CFT073]
 gi|26110254|gb|AAN82440.1|AE016767_200 Hypothetical protein yhdP [Escherichia coli CFT073]
          Length = 1266

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|327479585|gb|AEA82895.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 1266

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/299 (11%), Positives = 87/299 (29%), Gaps = 21/299 (7%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60
           R++     F   +  +        +    ++R + + +    +   + V G ++      
Sbjct: 13  RQLFWVAAFGLILAALYVSLGRQLVPLVAEYRTELQERVRTALDMPVTV-GRLEGRWEGL 71

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P +   D+ + + +      +++ +++  +    L +   R+  +     HL+      
Sbjct: 72  APRLLAHDVLLGEGDS---AMRLDRIAVVPDLAGSLWARSWRLSSLEFSGVHLSVLEGED 128

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL--QISARFLNII 177
           G           D       +KI      +K +          S + L     +      
Sbjct: 129 GKWQVKGLPERDDATP-PDPQKI------LKALQHIRGLALLDSQITLEPFGDSPLTLSY 181

Query: 178 SPLSIDSIKGSVIAEGTGNF-DNKRSAFKITANFP---AKNKAISLKIQLFPLAYPIIID 233
           + LS+ +    +  +G     D +  A ++ A             L + L    +   + 
Sbjct: 182 TDLSLRTDGNRLRLDGRSVLPDGQPLALRLNARVQPQRWAQAEAQLYLSLPQSDWAAWLP 241

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                 W  +     G   +     +L    L     RL   +      V++    + +
Sbjct: 242 GRLTGAWQLQTAQLGGELWLRWKAQQLERAVLRLNAPRLRAAYT-EHSPVQLEDLAVDA 299


>gi|255003859|ref|ZP_05278660.1| hypothetical protein AmarV_00110 [Anaplasma marginale str.
           Virginia]
          Length = 906

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 51/365 (13%), Positives = 110/365 (30%), Gaps = 37/365 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKK---IAVKGGIKIHIL 59
           + L  L     VV      VP  +DW   + E   +Q     G     +   G I+  +L
Sbjct: 10  KFLGRLCCCVLVVFAALAFVPYLVDWNAHYGEYVFKQLGAATGSSGAVVKAIGNIEGSLL 69

Query: 60  PFPSVFFKDIRI---DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
             P +  +++ +   +     +    I+ + +  + L +L GE +V  + +         
Sbjct: 70  -LPKLTVRNLYVECSEDAAGCAGTLSIDRMELSVDPLSILMGEPKVRTISLYG----LRT 124

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
           S  G+      ++   + H  I +   V GG +       + V+  S     I +    +
Sbjct: 125 SVGGLVGMVGSQTKSGLGHVRIFDSAVVTGGVVGASASAYNTVHVKS---ATIKSSGSAL 181

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP--LAYPIIIDL 234
                +       +           S  K+  + P  +  +S           +    ++
Sbjct: 182 FGDAVLKIGGTKYLLSSKLERSAAGSTVKVELHSPNTSMVLSGNGAGQGLFDDFGARFEV 241

Query: 235 FG-NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
              NL    +       + + G  +    + LSA      G+         +    ++S 
Sbjct: 242 KTENLSELAQTVAVVTNYRLLGSVASAEEMVLSAGIKAAKGS------GFEVKDLTMKSK 295

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN---DDLKKDD 350
                       +++         S N +    D      F E     ++    D +   
Sbjct: 296 S------ISGTLELACTYAPFCTTSLNFSSIDLD----ALFPEGLGTEQDAYYADFQSSA 345

Query: 351 IQYSV 355
            ++SV
Sbjct: 346 ERFSV 350


>gi|254429799|ref|ZP_05043506.1| conserved hypothetical protein TIGR02099 [Alcanivorax sp. DG881]
 gi|196195968|gb|EDX90927.1| conserved hypothetical protein TIGR02099 [Alcanivorax sp. DG881]
          Length = 1247

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/351 (11%), Positives = 94/351 (26%), Gaps = 35/351 (9%)

Query: 31  DFREDFERQATLIVGKKIAV---KGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLS 87
           D+RE  E      +   + +    G +       P    + IR+   E  S    ++ + 
Sbjct: 17  DYRERLEHLFEERIQTPLTIAELNGTMS---GLVPQFVARQIRLPAPEGESPLV-LDEVV 72

Query: 88  MRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVS-----NWFQRKSTMDMIHNVILEK 141
           +  +    L   ++ + +  +    LN      G       +   +           + K
Sbjct: 73  LSIDVFRSLWHRDLVLEEFSVRGVDLNLVRGEDGKIRLRGLDVLGQSDPESRPPLERILK 132

Query: 142 IHVKGGRIKIIDQE------SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195
           +  +   + I D               S L+  ++         + +++    +      
Sbjct: 133 LFYRQQLLSISDARLSLEWPGMPPLAASQLDATMTNTGGEHRLAVRVEARDRPLSLLAKI 192

Query: 196 NFDNKRSAFK-ITANFPAKNKAISLKIQL-FPLAYPIII-DLFGNLFWN---EKQPIYSG 249
           +  +   A   + A+   + +   L   L      P+ +  L  ++      E     SG
Sbjct: 193 HLHDDAYALDEVDADIYTRFEGKRLHEWLPDIDKMPLDLGSLDASVALWGTLEGGEPISG 252

Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNFKI--SDGNVRISRYKLQSILPNSSTDEDNKTKV 307
              V      L   + +   + LS    +   D    +S   L    P+           
Sbjct: 253 QLQVDVPTLTLTEADTAWPLTGLSLRASLLREDDEATLSLSNLSGKTPSGPLTLG----- 307

Query: 308 SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358
             D            +     NE        ++ ++           V ++
Sbjct: 308 --DMALRWEARGELRQWQLRANELPVHAIS-QQFQSWPFSLPAPADKVRQQ 355


>gi|218691527|ref|YP_002399739.1| hypothetical protein ECED1_3895 [Escherichia coli ED1a]
 gi|218429091|emb|CAR09898.1| conserved hypothetical protein; putative membrane protein, putative
           transporter [Escherichia coli ED1a]
          Length = 1266

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|331649037|ref|ZP_08350125.1| conserved hypothetical protein [Escherichia coli M605]
 gi|331042784|gb|EGI14926.1| conserved hypothetical protein [Escherichia coli M605]
          Length = 1266

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                S + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTSITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|282900257|ref|ZP_06308208.1| protein of unknown function DUF490 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194762|gb|EFA69708.1| protein of unknown function DUF490 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 1180

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/326 (12%), Positives = 84/326 (25%), Gaps = 24/326 (7%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66
           I LG    ++L+G           D     ++  T  + + + +    +  +     V F
Sbjct: 27  IALGGSVLILLMGGMWWVRGFIHKDLVPLAQKGLTSTLNRPVQLGAMKEFSL---TGVRF 83

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126
               I      S    I+ + +      L+       D+ +  P +     ++       
Sbjct: 84  AASGIPPTPTDSDRIAIQAVDVSFNPWDLVVNRHLKLDVTLIDPDIYIEQDNQQRWITTT 143

Query: 127 -RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
                   I    L KI ++ GR+ ++          SD +L +   F  +   + +   
Sbjct: 144 IAPPEEPGIIKTDLSKISIRNGRLVLV-PNQRLETPGSDTSLSVPITFAKLYGRVQLLDN 202

Query: 186 KGSVIAEGTGNFD---NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242
                 + TGN     +   A  +                L+      +I     +   +
Sbjct: 203 NQKFKFDLTGNNQSGGDISIAGDMETKPTLMGNVNVKTKDLYIADISRLIPADIKVRSGK 262

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRL----------SGNFKISDGNVRISRYKLQS 292
                    +         N  L     +L           GN K     + I       
Sbjct: 263 INSDIKIQLTPEDPVLLYGNANLEGVNWQLGKIPQPFNNTQGNIKFQGSAIEIDNLVGNY 322

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFS 318
                          S D++   N S
Sbjct: 323 GKI--PVVAKG----SIDQKRGFNLS 342


>gi|218702012|ref|YP_002409641.1| hypothetical protein ECIAI39_3738 [Escherichia coli IAI39]
 gi|218371998|emb|CAR19854.1| conserved hypothetical protein; putative membrane protein, putative
           transporter [Escherichia coli IAI39]
          Length = 1266

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|56459497|ref|YP_154778.1| hypothetical protein IL0386 [Idiomarina loihiensis L2TR]
 gi|56178507|gb|AAV81229.1| Uncharacterized conserved membrane protein [Idiomarina loihiensis
           L2TR]
          Length = 1289

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/272 (11%), Positives = 95/272 (34%), Gaps = 13/272 (4%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           +L ++ + L  +  +V VG   +   + +  D  E  E+Q      + +++   + +   
Sbjct: 7   ILNKLWLTLAIVLVLVAVGLSLLRYSLPYLPDLTEPLEQQLEARFQQPVSIS-DLSMAWT 65

Query: 60  P-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLS 117
              PS+   ++ + ++E    + ++  + +  +F   LL  ++      ++   +   + 
Sbjct: 66  REGPSIVLDNLVLLEREQSPVQVRVGKVHVVLDFWRTLLDQQLIAQQFILNDARIAVDIR 125

Query: 118 SKGVSNWFQRKSTMDMIHNV--ILEKIHVKGGRIKIID-QESDQVYFLSDLNLQISARFL 174
               +N  ++     +       LEK  +  G + + + +   +   +  L+     +  
Sbjct: 126 KFSAANEAEKLDLDYVNRLFLQQLEKFSLNNGELLLTNLRGVTREIDIDRLSWTNEGKKH 185

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKR---SAFKITANFPAKNKAISLKIQL-FPLAYPI 230
             I    ++    +   +   +    R      +   N    + +  L+ QL        
Sbjct: 186 QGIGQFRMEDFATN-SLDFIIDLRGDRWSEFNGQFYVNSQNVDISPWLEEQLGDIDVQAS 244

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262
            ++  G L       ++ G+  +  +    L+
Sbjct: 245 NVNFTGWLDVRNG-QLFEGLVKLRDNRITWLD 275


>gi|327314687|ref|YP_004330124.1| hypothetical protein HMPREF9137_2484 [Prevotella denticola F0289]
 gi|326944175|gb|AEA20060.1| conserved hypothetical protein [Prevotella denticola F0289]
          Length = 1714

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/363 (12%), Positives = 102/363 (28%), Gaps = 42/363 (11%)

Query: 2   LRRVLIGLGFLFS--VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIH 57
           +RR L  L    +  V+L       L+         +      +   G ++++     + 
Sbjct: 7   MRRSLKWLVAAVATPVILFLILVGLLYCPPVQNWAVKQVAAYVSAHTGMEVSLD---HVS 63

Query: 58  ILPFPSVFFKDIRI-----DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112
           +     +    +RI              + +  L    + LPLL   + V ++       
Sbjct: 64  LSYPLDLQLDGLRILRQNDSIPNRKDTVADVRSLVASVDLLPLLESRVEVNELTFTGLKA 123

Query: 113 N-------FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII----------DQE 155
           N         +            +   +  +V + K  V+GG I +            Q+
Sbjct: 124 NTVNFIGDLRIRGDLQRLHVVSHAVNLIGDSVRVNKADVEGGWIDVALGDTVPEDPNRQK 183

Query: 156 SDQVYFLSDLN-------LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208
                 +  LN       L +    +++ +  +    KG+ +      +      ++   
Sbjct: 184 PLWRVNIDRLNLSKTAFSLHLPGDTMSVHARFTKAVAKGTELLLHDNIYKVADLDWQGGT 243

Query: 209 NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268
               +N    ++         +     G   +    P  S     A              
Sbjct: 244 FSYDQNYVRRVRQGFDAAHMAMRDVNIGIDSFLYAAPKLSLRVRTANFR-----ERSGLV 298

Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN-LLNFSENGAESMHD 327
            +   G F +   ++R+   +LQ      +   +       D+    L+   +G  S+ D
Sbjct: 299 LNDFRGAFTMDSTHIRLPGLRLQMPGTELAGHFEMDMNAFADDHPGQLSARMDGYLSLVD 358

Query: 328 LNE 330
           L  
Sbjct: 359 LRP 361


>gi|320194722|gb|EFW69352.1| hypothetical protein EcoM_03164 [Escherichia coli WV_060327]
          Length = 1266

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|281180279|dbj|BAI56609.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 1266

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                S + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTSITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|54297668|ref|YP_124037.1| hypothetical protein lpp1719 [Legionella pneumophila str. Paris]
 gi|53751453|emb|CAH12871.1| hypothetical protein lpp1719 [Legionella pneumophila str. Paris]
          Length = 1273

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 89/288 (30%), Gaps = 28/288 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++ +GL  L  V  V +        W   ++ + E   T ++G+ + V+          
Sbjct: 13  KKIWMGLAVLIIVAAVFSSVFRALTPWAKQYKGEVEEHLTSLLGQPVTVQTMETGWYWFE 72

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           P V  K IRI   +  +    ++ L +       L +  I+   +YID  HL  +    G
Sbjct: 73  PVVKLKHIRI--HDGHNKSIYLDRLIVGVNLFKSLWNWRIQPGVLYIDDMHL-VFREKDG 129

Query: 121 VS-------------NWFQRKSTMDMIHNVILEKIHVKG--GRIKIIDQESDQVYFLSDL 165
                          +    K+   +      EK+ V+     +   D     +  +++L
Sbjct: 130 HWRIEGISRNAMKDTDITPEKTREILDWLAQQEKLIVRHVSAHLHFND---GSLIPVNEL 186

Query: 166 NLQISARFLNIISPLSID-SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
           NL I  +  N             + + +  GN     S  + T      +    L  Q  
Sbjct: 187 NLSIVNKGGNYKIKGEARLEQTNATVFQLLGNVQFDPSQIENTNGRFYFSAINVLPAQWQ 246

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
            L     + L G     +               S    L L     +L
Sbjct: 247 NLLPKSSMQLEGG----KGNVSLWVDLEKGNISSIQAELRLKRLAWKL 290


>gi|110643480|ref|YP_671210.1| hypothetical protein ECP_3329 [Escherichia coli 536]
 gi|191173844|ref|ZP_03035365.1| conserved hypothetical protein [Escherichia coli F11]
 gi|215488554|ref|YP_002330985.1| hypothetical protein E2348C_3517 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|110345072|gb|ABG71309.1| hypothetical protein YhdP [Escherichia coli 536]
 gi|190905894|gb|EDV65512.1| conserved hypothetical protein [Escherichia coli F11]
 gi|215266626|emb|CAS11065.1| conserved membrane protein, predicted transporter [Escherichia coli
           O127:H6 str. E2348/69]
 gi|222034955|emb|CAP77698.1| Uncharacterized protein yhdP [Escherichia coli LF82]
 gi|312947795|gb|ADR28622.1| hypothetical protein NRG857_16060 [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 1266

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|320322506|gb|EFW78599.1| hypothetical protein PsgB076_21297 [Pseudomonas syringae pv.
           glycinea str. B076]
          Length = 1271

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/287 (10%), Positives = 87/287 (30%), Gaps = 28/287 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A+  +G  +++ G ++     F
Sbjct: 13  RWGLSLCALVLVLAALYVSLGRQLTPLVAEYRVDVETRASSALGMPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P     D+ + +   GS   +++ + +  +    LL+ ++R+  + +D          +
Sbjct: 72  APVFLAHDVMVGE---GSSAVRLDRVRVVPDLWESLLTRQVRIAHLEVDGLQFMLRQDKE 128

Query: 120 GVSNWFQRKSTMDMIHNVI--------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
           G  +        D   +          +  + +   ++ +          L+ +NL ++ 
Sbjct: 129 GNWSVQGLPVRNDSPFDPGQVLEQMQMVSHLSLLDSQVTV-QPFDAAPLTLTYVNLSLAT 187

Query: 172 RFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
              +      +    G              +           K+    +   L    +  
Sbjct: 188 GSYHQRLDARLTLPDGQPFALNVRSRIQASQ----------WKDGEADVYASLPQSDWAK 237

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
            +       W   +    G   ++     + +         + G + 
Sbjct: 238 WLPKSLTREWTLSKLQAGGELWMSWGKGTVQSATARLNAPHVKGVYA 284


>gi|170683155|ref|YP_001745517.1| hypothetical protein EcSMS35_3541 [Escherichia coli SMS-3-5]
 gi|170520873|gb|ACB19051.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
          Length = 1266

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/322 (12%), Positives = 90/322 (27%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+      
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWHLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|330941923|gb|EGH44640.1| hypothetical protein PSYPI_20610 [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 355

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/337 (9%), Positives = 97/337 (28%), Gaps = 24/337 (7%)

Query: 2   LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++R     L  L  L  +++     +P  +     R+    +   +   +  +   + + 
Sbjct: 1   MKRRYSWPLWTLAALIVLLIAVNIALPYLV-----RDYLNNKLADMGDYRGEIT-DVDLA 54

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +    +   K ++I + +            + +   +  L      V       P +NF 
Sbjct: 55  LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTDPQINFV 113

Query: 116 LSSKGVSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
                  +   + +        +  + L ++ +  GRI   +  S     +    +  S 
Sbjct: 114 DGGSKQDSQTGQGTDWRTQMNKLLPITLNELRIDNGRITFNNFNSKPKVKIEADQVNASI 173

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230
             L  +  +  +        +G                +  +  +    K++   +    
Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESSARFDPFSNFEDFDFKLRATGIQLKK 230

Query: 231 IIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
           + D       ++        V     D  +L        ++    N++    N     ++
Sbjct: 231 LNDFSSAYGKFDFNAGDGDVVIEAQADKGQLKGYIKPLLRNVDVFNWQQDVENKDKGVFR 290

Query: 290 --LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
              ++++  S T   N+ +        L+ S +  + 
Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327


>gi|306816420|ref|ZP_07450552.1| hypothetical protein ECNC101_07379 [Escherichia coli NC101]
 gi|305849985|gb|EFM50444.1| hypothetical protein ECNC101_07379 [Escherichia coli NC101]
          Length = 1266

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|330987078|gb|EGH85181.1| hypothetical protein PLA107_18769 [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 1271

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/287 (10%), Positives = 87/287 (30%), Gaps = 28/287 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A+  +G  +++ G ++     F
Sbjct: 13  RWGLSLCALVLVLAALYVSLGRQLTPLVAEYRVDVETRASSALGMPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P     D+ + +   GS   +++ + +  +    LL+ ++R+  + +D          +
Sbjct: 72  APVFLAHDVMVGE---GSSAVRLDRVRVVPDLWESLLARQVRIAHLEVDGLQFMLRQDKE 128

Query: 120 GVSNWFQRKSTMDMIHNVI--------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
           G  +        D   +          +  + +   ++ +          L+ +NL ++ 
Sbjct: 129 GNWSVQGLPVRNDSPFDPGQVLEQMQMVSHLSLLDSQVTV-QPFDAAPLTLTYVNLSLAT 187

Query: 172 RFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
              +      +    G              +           K+    +   L    +  
Sbjct: 188 GIYHQRLDARLTLPDGQPFALNVRSRIQASQ----------WKDGEADVYASLPQSDWAK 237

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
            +       W   +    G   ++     + +         + G + 
Sbjct: 238 WLPKSLTREWTLSKLQAGGELWMSWGKGTVQSATARLNAPHVKGVYA 284


>gi|153948116|ref|YP_001399396.1| hypothetical protein YpsIP31758_0403 [Yersinia pseudotuberculosis
           IP 31758]
 gi|152959611|gb|ABS47072.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           31758]
          Length = 1305

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/335 (12%), Positives = 108/335 (32%), Gaps = 38/335 (11%)

Query: 2   LRRVLIGL---GFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56
           +RR+   +   G    VV+    +    +     ++R     +   + G  + V G ++ 
Sbjct: 1   MRRLPKIMFATGATIIVVVALLVSALRMMLPLINEYRPQIVAKIQSVSGIPLDV-GFMQG 59

Query: 57  HILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
               F P++  +DIR    +      +++ +++  +    LL    +  D+   Q  L+ 
Sbjct: 60  TWETFGPTLELRDIRAQMPKAD---LQVQRVTLALDVWQSLLHWRWQFRDLTFYQLQLDL 116

Query: 115 YLSSKGVSNWF--QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISA 171
           + +     N         +  I    L++  ++  RI  +     +    +  L    S+
Sbjct: 117 HTTLDATQNNGSNLETGNVHNIFLRQLDRFDLRNSRISFLTPSGPRAELEIPQLTWLNSS 176

Query: 172 RFLNIISPLSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                   +S+ +I G   + +   +  + +                ++ +Q   +    
Sbjct: 177 TRHRAEGQISLSTINGQHGVVQVRMDLHDNQGILN----------NGTVYMQADNIDLKP 226

Query: 231 IID--LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
            I   L  N   +  +   +   S+        N+ LS  ++  +     +   + +  +
Sbjct: 227 WISRWLQNNTGLDNAEFSLAAWLSIKSGEVYRGNVLLSQGQANWT--VGSNSHQLSVDNF 284

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
            L+     +    D           +LN   +G  
Sbjct: 285 VLEGRRQGNGWQID---------APVLNLKTDGQA 310


>gi|91212665|ref|YP_542651.1| hypothetical protein UTI89_C3676 [Escherichia coli UTI89]
 gi|117625529|ref|YP_858852.1| hypothetical protein APECO1_3199 [Escherichia coli APEC O1]
 gi|218560307|ref|YP_002393220.1| hypothetical protein ECS88_3621 [Escherichia coli S88]
 gi|237706008|ref|ZP_04536489.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|91074239|gb|ABE09120.1| hypothetical protein YhdP [Escherichia coli UTI89]
 gi|115514653|gb|ABJ02728.1| conserved membrane protein, predicted transporter [Escherichia coli
           APEC O1]
 gi|218367076|emb|CAR04847.1| conserved hypothetical protein; putative membrane protein, putative
           transporter [Escherichia coli S88]
 gi|226899048|gb|EEH85307.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|294491796|gb|ADE90552.1| conserved hypothetical protein TIGR02099 [Escherichia coli IHE3034]
 gi|323951243|gb|EGB47118.1| adhesin HecA family protein [Escherichia coli H252]
          Length = 1266

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|83943201|ref|ZP_00955661.1| hypothetical protein EE36_13508 [Sulfitobacter sp. EE-36]
 gi|83846209|gb|EAP84086.1| hypothetical protein EE36_13508 [Sulfitobacter sp. EE-36]
          Length = 1114

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/371 (9%), Positives = 95/371 (25%), Gaps = 46/371 (12%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVP--LFIDWTDFREDFERQATL-----IVGK-KIAVKGGI 54
           +  L+ +  + + +   A  +     +         E +         +G  ++ +    
Sbjct: 21  KWSLLVISLIVATIAGAAIYMIRSPIVVPEWLETRIEERFAKDMPLARIGFGEMVLIVDE 80

Query: 55  KIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
                  P V  +D+ I   +  S  +    +        LL+G+++  D+ +     N 
Sbjct: 81  GWR----PRVRLRDVNITNPQGVS-FAAFREVRASFSIQGLLAGDVQPRDIAMSGVVANL 135

Query: 115 YLSSKGVSNWFQRKSTMDMIHNV--------------------ILEKIHVKGGRIKIIDQ 154
                G         T                            L  I ++   ++  D 
Sbjct: 136 RRDKDGRVALSAASGTAPAERRAATMPQLIGQLDTVFETKALSRLRSIELRALTLRYTDL 195

Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214
           +SD+++ +    L +     N+     +  + G           + +     +      +
Sbjct: 196 QSDRMWTVDGGRLLLDREGDNLRMTAELAVLGGGADVATLSANYSSKIGDTASQFGVNFD 255

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLF-WNEKQPIYSGVFSVAGDFSKLLN----LELSAKK 269
              +  I +   A+  +  L  ++           G F       ++          A  
Sbjct: 256 GVSAGDIAVQNPAFAWLKVLRASISGSVRSSLDEDGTFEPLNATLQIGAGVVQPNERATP 315

Query: 270 SRLSG-----NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL-NFSENGAE 323
               G     ++      +R     ++      S   +    +  D+   L         
Sbjct: 316 IPFDGARSYFSYDPDQRLLRFDELSVE--SKWVSGRIEGAASLGIDDSGKLGELVAQVRL 373

Query: 324 SMHDLNETDFF 334
                +  D +
Sbjct: 374 RDLVADPADIY 384


>gi|257482238|ref|ZP_05636279.1| hypothetical protein PsyrptA_03152 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331011521|gb|EGH91577.1| hypothetical protein PSYTB_17959 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 1271

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/287 (10%), Positives = 87/287 (30%), Gaps = 28/287 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A+  +G  +++ G ++     F
Sbjct: 13  RWGLSLCALVLVLAALYVSLGRQLTPLVAEYRVDVETRASSALGMPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P     D+ + +   GS   +++ + +  +    LL+ ++R+  + +D          +
Sbjct: 72  APVFLAHDVMVGE---GSSAVRLDRVRVVPDLWESLLARQVRIAHLEVDGLQFMLRQDKE 128

Query: 120 GVSNWFQRKSTMDMIHNVI--------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
           G  +        D   +          +  + +   ++ +          L+ +NL ++ 
Sbjct: 129 GNWSVQGLPVRNDSPFDPGQVLEQMQMVSHLSLLDSQVTV-QPFDAAPLTLTYVNLSLAT 187

Query: 172 RFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
              +      +    G              +           K+    +   L    +  
Sbjct: 188 GSYHQRLDARLTLPDGQPFALNVRSRIQASQ----------WKDGEADVYASLPQSDWAK 237

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
            +       W   +    G   ++     + +         + G + 
Sbjct: 238 WLPKSLTREWTLSKLQAGGELWMSWGKGTVQSATARLNAPHVKGVYA 284


>gi|330868268|gb|EGH02977.1| hypothetical protein PSYAE_13657 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 959

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 95/284 (33%), Gaps = 22/284 (7%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A+  +G  +++ G ++     F
Sbjct: 13  RWGLSLCALVLVLAALYVSLGRQLTPLVAEYRVDVETRASSALGMPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P     D+ + +   GS   +++ + +  +    LL+ ++R+  + +D          +
Sbjct: 72  APVFLAHDVMVGE---GSSAVRLDRVRVVPDLWESLLARQVRIAHLEVDGLQFMLRQDKE 128

Query: 120 GVSNWFQRKSTMDMIHNV--ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
           G  +        D   +   +LE++ +    + +  Q + Q +  + L L          
Sbjct: 129 GNWSVQGLPVRNDSPFDPGQVLEQMQMVSHLLLLDSQVTVQPFDAAPLTL--------TY 180

Query: 178 SPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIID 233
             LS+ +       +      D +  A  + +       K+    +   L    +   + 
Sbjct: 181 VNLSLATGSYHQRLDARLTLPDGQPFALNVRSRIQASQWKDGEADVYASLPQSDWARWLP 240

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
                 W   +    G   ++     + +         + G + 
Sbjct: 241 KSLTREWTLSKLQAGGELWMSWGKGTVQSATARLNAPHVKGVYA 284


>gi|75906465|ref|YP_320761.1| hypothetical protein Ava_0240 [Anabaena variabilis ATCC 29413]
 gi|75700190|gb|ABA19866.1| Protein of unknown function DUF490 [Anabaena variabilis ATCC 29413]
          Length = 2049

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 84/295 (28%), Gaps = 11/295 (3%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +L R  + +G L  V L+G           +     +   T  + + + +       +  
Sbjct: 22  ILSRGGMAVGGLLIVGLMGGVWRLWTFVQKELTPLAQESLTTTLNRPVQLGKVTNFSL-- 79

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              V F    I        +  ++ + +    L L+       ++ +  P +     ++G
Sbjct: 80  -TGVQFAASSIPATPTDPDKLTMDAVEVGFNPLLLVFNRQLKLNVTLVNPDVYIEQDNQG 138

Query: 121 VSNWFQ-RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
                              L+ I+ + G++ ++ Q  +     +      S+ +  I  P
Sbjct: 139 RWITTTIAPPGAAGAIKTDLDHINFRNGKLSLLPQVRNLAVGEAKTTTPSSSLYPPIPCP 198

Query: 180 LSIDSIKGSVIAE---GTGNFDNKRSAFKITA-NFPAKNKAISLKIQLFPLAYPIIIDLF 235
                    +      GT          K +A        ++ ++ ++ P      I + 
Sbjct: 199 EGKACTLPPLEFSQLNGTAQILENNQLIKFSAKGISDSGGSVEMEGEVRPKTTAANIQVR 258

Query: 236 GN---LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
           G         +                L    L  +   L G+  +    V+I R
Sbjct: 259 GQELLAADVSRLVKLPVGLEAGKVNGDLRVELLPGQTPLLYGSADLQKVTVQIPR 313


>gi|302187098|ref|ZP_07263771.1| hypothetical protein Psyrps6_12135 [Pseudomonas syringae pv.
           syringae 642]
          Length = 355

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/337 (10%), Positives = 98/337 (29%), Gaps = 24/337 (7%)

Query: 2   LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++R     L  L  L  +++     +P  +     R+    +   +   +  +   + + 
Sbjct: 1   MKRRYSWPLWTLAALVVLLIAVNIALPYLV-----RDYLNDKLADMGDYRGEIA-DVDLA 54

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +    +   K ++I + +            + +   +  L      V       P +NF 
Sbjct: 55  LWRG-AYRIKRLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTGPQINFV 113

Query: 116 LSSKGVSNWFQRKSTM----DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
                  +   + +      D +  + L ++ +  GRI   +  S     +    +  S 
Sbjct: 114 DGGSKQDSQTGQGTDWRTQMDKLLPMTLNELRIDNGRITFNNFNSKPKVKIEADQVNASI 173

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230
             L  +  +  +        +G                +  +  +    K++   +    
Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESSARFDPFSNFEDFDFKLRATGIQLKK 230

Query: 231 IIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
           + D       ++        V     D  +L        ++    N++    N     ++
Sbjct: 231 LNDFSSAYGKFDFNAGDGDVVIEAQADKGQLKGYIKPLLRNVDVFNWQQDVENKDKGVFR 290

Query: 290 --LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
              ++++  S T   N+ +        L+ S +  + 
Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327


>gi|71737866|ref|YP_276288.1| hypothetical protein PSPPH_4166 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71558419|gb|AAZ37630.1| conserved hypothetical protein TIGR02099 [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 1271

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/287 (10%), Positives = 87/287 (30%), Gaps = 28/287 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A+  +G  +++ G ++     F
Sbjct: 13  RWGLSLCALVLVLAALYVSLGRQLTPLVAEYRVDVETRASSALGMPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P     D+ + +   GS   +++ + +  +    LL+ ++R+  + +D          +
Sbjct: 72  APVFLAHDVMVGE---GSSAVRLDRVRVVPDLWESLLARQVRIAHLEVDGLQFMLRQDKE 128

Query: 120 GVSNWFQRKSTMDMIHNVI--------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
           G  +        D   +          +  + +   ++ +          L+ +NL ++ 
Sbjct: 129 GNWSVQGLPVRNDSPFDPGQVLEQMQMVSHLSLLDSQVTV-QPFDAAPLTLTYVNLSLAT 187

Query: 172 RFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
              +      +    G              +           K+    +   L    +  
Sbjct: 188 GSYHQRLDARLTLPDGQPFALNVRSRIQASQ----------WKDGEADVYASLPQSDWAK 237

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
            +       W   +    G   ++     + +         + G + 
Sbjct: 238 WLPKSLTREWTLSKLQAGGELWMSWGKGTVQSATARLNAPHVKGVYA 284


>gi|320330025|gb|EFW86012.1| hypothetical protein PsgRace4_10372 [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 1271

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/282 (11%), Positives = 88/282 (31%), Gaps = 18/282 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A+  +G  +++ G ++     F
Sbjct: 13  RWGLSLCALVLVLAALYVSLGRQLTPLVAEYRVDVETRASSALGMPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P     D+ + +   GS   +++ + +  +    LL+ ++R+  + +D          +
Sbjct: 72  APVFLAHDVMVGE---GSSAVRLDRVRVVPDLWESLLARQVRIAHLEVDGLQFMLRQDKE 128

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           G  +        D   +       ++  ++       D    +   +    A        
Sbjct: 129 GNWSVQGLPVRNDSPFDP---GQVLEQMQMVSHLSLLDSQVTVQPFDA---APLTLTYVN 182

Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235
           LS+ +       +      D +  A  + +       K+    +   L    +   +   
Sbjct: 183 LSLATGSYHQRLDARLTLPDGQPFALNVRSRIQASQWKDGEADVYASLPQSDWAKWLPKS 242

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
               W   +    G   ++     + +         + G + 
Sbjct: 243 LTREWTLSKLQAGGELWMSWGKGTVQSATARLNAPHVKGVYA 284


>gi|110636633|ref|YP_676840.1| hypothetical protein CHU_0208 [Cytophaga hutchinsonii ATCC 33406]
 gi|110279314|gb|ABG57500.1| conserved hypothetical protein; possible membrane protein
           [Cytophaga hutchinsonii ATCC 33406]
          Length = 806

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 94/288 (32%), Gaps = 19/288 (6%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI---LPFPSVFFKDIRIDQKEDGSF-- 79
           L+I   D       Q    +  K+ V   I I I    P  S+ F D++  +   G    
Sbjct: 2   LYIYKDDIIYLATMQINKRLNTKVDVSKKIDISILEKFPELSIGFHDVKCYEPGAGKPVI 61

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI---HN 136
            + ++ L +  +   + +G   +  ++++  H++      GV N+   K          +
Sbjct: 62  FASVKNLFITFDIKDVWNGNYIIDKVFLEDGHIHLRTDENGVHNFMILKKDTSTAKSNSD 121

Query: 137 VILEKIHVKGGRIKIIDQESD----QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE 192
             +  I +K        + S+        +++ +L  +     I     + +    +   
Sbjct: 122 FSISFIQLKNIDFIYDFRPSNHLYQSDIKITEASLVHARNDFTIHVTGDMHTDGIRINEN 181

Query: 193 GTGNFDNKRSAFKITANFPAKNKAI---SLKIQLFPLAYPIIIDLF---GNLFWNEKQPI 246
                 + + + KI  N  ++  +I   +L I     A   + D+     +L +   +  
Sbjct: 182 NFLQNKDIKLSSKIRYNTESEVFSITPSTLHINTGAYAVEGLYDIKKSFVDLRFKTDKND 241

Query: 247 YSGVFS-VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
                S +   ++  +    S      +G  K +  N       +   
Sbjct: 242 IQSFVSILPKAYAASIQEYKSTGNVYFNGTIKGTASNAHSPSININFG 289


>gi|320325244|gb|EFW81311.1| hypothetical protein PsgB076_07452 [Pseudomonas syringae pv.
           glycinea str. B076]
          Length = 355

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/337 (10%), Positives = 97/337 (28%), Gaps = 24/337 (7%)

Query: 2   LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++R     L  L  L  +++     +P  +     R+    +   +   +  +   + + 
Sbjct: 1   MKRRYSWPLWTLAALVVLLIAVNIALPHLV-----RDYLNDKLADMGDYRGEIT-DVDLA 54

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +    +   K ++I + +            + +   +  L      V       P +NF 
Sbjct: 55  LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTGPQINFV 113

Query: 116 LSSKGVSNWFQRKSTM----DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
            S    ++   + +      D +  + L ++ +  GRI   +  S     +    +  S 
Sbjct: 114 DSGSKQNSQTGQGTDWRTQMDKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQVNASI 173

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230
             L  +  +  +        +G                +  +  +    K++   +    
Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESSARFDPFSNFEDFDFKLRATGIQLKK 230

Query: 231 IIDLF---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
           + D     G   +N                       L       + +  + + +  + R
Sbjct: 231 LNDFSSAYGKFDFNAGDGDLVIEAQADKGQLSGYIKPLLRNVDVFNWHQDVENKDKGVFR 290

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
              ++++  S T   N+ +        L+ S +  + 
Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327


>gi|94986495|ref|YP_594428.1| uncharacterized protein involved in outer membrane biogenesis
           [Lawsonia intracellularis PHE/MN1-00]
 gi|94730744|emb|CAJ54106.1| uncharacterized protein involved in outer membrane biogenesis
           [Lawsonia intracellularis PHE/MN1-00]
          Length = 1075

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 110/323 (34%), Gaps = 29/323 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFI---DWTDFREDFERQATLIVGKKIAVKGGIKIHI 58
           +R  LI +  LF + ++  F +  +                 +  +         I  HI
Sbjct: 1   MRSFLISIVTLFLLGIIVFFGITFYFIKQHPQYITNKILSTISKQLKDTSISANSIGFHI 60

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
           +PFP ++  ++ +  ++  +    I+   +  +   +LSG I ++ + + QP  +  L +
Sbjct: 61  VPFPKLYLTNVILQTQKGDT--IHIKECLITPKITNILSGNISIYSIEVIQPIASIILQN 118

Query: 119 KGVSN-----WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
           +   N     +   K    ++  +   K+ ++ G I   +  +D  + +  +N +I    
Sbjct: 119 EQKKNSKTTGYAIPKQVSHLLQLITDSKLFIENGSITFQN--NDYCFKIIGINGKIGVSK 176

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
             + S L + + +       T + ++  +   I             K+QL     P  I+
Sbjct: 177 T-LTSSLKLTADEIIWEIMNTVSNNSSTAQKSIE------------KVQLHIEDMPYKIN 223

Query: 234 LFGNLFWNEKQPIYSG-VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                  ++  P+Y     +    F     +  +   + ++ +F          +  +  
Sbjct: 224 ---TALLHDTSPLYDLFTNTKKTTFKVSGAIPTTNTANNITFDFTTKLEKDNSDKLTMHG 280

Query: 293 ILPNSSTDEDNKTKVSQDEENLL 315
            L    T  +  T +        
Sbjct: 281 QLHIEGTLPNGNTSIPILLSVPF 303


>gi|94987131|ref|YP_595064.1| hypothetical protein LI0689 [Lawsonia intracellularis PHE/MN1-00]
 gi|94731380|emb|CAJ54743.1| uncharacterized protein conserved in bacteria [Lawsonia
           intracellularis PHE/MN1-00]
          Length = 1382

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/380 (13%), Positives = 111/380 (29%), Gaps = 29/380 (7%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +L ++L  L   F++ L    T  LFI  +      +   + ++ ++  +     I I P
Sbjct: 6   ILSKLLYTLLGAFTLFLGLIITGILFIRTSTGIAWIKNTVSSLLQQQGIILQVSSI-IGP 64

Query: 61  FP-SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-NFYLSS 118
           FP  +   ++ +           I  L +++    L  G++ +    ++   L     ++
Sbjct: 65  FPEQITINELSLSDVNG--TYLTISNLEIQSNLWALFKGQLEILSFELNDLVLYRLPSNN 122

Query: 119 KGVSNWFQ--RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
               +            +     E I ++   I      SD +     L+L+      N 
Sbjct: 123 NLKKSSTSFVLPHISFDLTPWWTEHIRIQNIHINNTQLSSDIIGIPLVLSLEGDGTLTNW 182

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAF------KITANFPAKNKAISLKIQLFPLAYPI 230
                + S        GT  +   ++ F               + A         L  P+
Sbjct: 183 NGTFQLSS-SNKTKIIGTLRYQGNKTQFFEYVHPTRIVTLEIDSVADKKSYNNSILEQPL 241

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
            + L      + +  ++S +           ++E+S ++ + +   K +         +L
Sbjct: 242 HLHLSI-YPEHNRIILHSLLAEYGSWLLTSESIEVSNEQLKGNILLKYNGEATH----QL 296

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN----ETDFFEEEEKKNKNDD- 345
                NSS             +   +      E     N    +T+        + + D 
Sbjct: 297 PIKKLNSSITLSGSL-----NKPNFSIQMTLPEINITKNIIDLQTELVINLGLFSTHSDI 351

Query: 346 LKKDDIQYSVNKKEEKDNSH 365
           L    I            S 
Sbjct: 352 LTSGTITVQGETIPNSILSS 371


>gi|213969711|ref|ZP_03397846.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
 gi|301384326|ref|ZP_07232744.1| hypothetical protein PsyrptM_16895 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302062128|ref|ZP_07253669.1| hypothetical protein PsyrptK_19251 [Pseudomonas syringae pv. tomato
           K40]
 gi|302130118|ref|ZP_07256108.1| hypothetical protein PsyrptN_01920 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213925519|gb|EEB59079.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
          Length = 356

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/341 (9%), Positives = 98/341 (28%), Gaps = 31/341 (9%)

Query: 2   LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++R     L  L  L  +++     +P  +     R+    +   +   +  V   + + 
Sbjct: 1   MKRRYSWPLWTLAALVVLLIAINIALPYVV-----RDYLNDKLADMGEYRGEVT-DVDLA 54

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +    +   K ++I + +            + +   +  L      V       P +NF 
Sbjct: 55  LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTNPQINFV 113

Query: 116 LSSKGVSNWFQRKSTMDMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
               G +N    ++               + L ++ +  GRI   +  S     +    +
Sbjct: 114 ---DGGNNKQASQTGQGTDWRTQMNKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQV 170

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPL 226
             S   L  +  +  +        +G                +  +  +    +++   +
Sbjct: 171 NASFYNLTNVVDVEGNRDA---EFKGKARLLGHADLESTARFDPFSNFEDFDFRLRATGI 227

Query: 227 AYPIIIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
               + D       ++        V     +  +L        ++    N++    N   
Sbjct: 228 QLKKLNDFSSAYAKFDFNAGDGDVVIEAQANKGQLSGYIKPLLRNVDVFNWQQDVQNKDK 287

Query: 286 SRYK--LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
             ++   ++++  S T   N+ +        L+ S +  + 
Sbjct: 288 GVFRSIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 328


>gi|331019035|gb|EGH99091.1| hypothetical protein PLA106_23608 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 356

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/341 (9%), Positives = 98/341 (28%), Gaps = 31/341 (9%)

Query: 2   LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++R     L  L  L  +++     +P  +     R+    +   +   +  V   + + 
Sbjct: 1   MKRRYSWPLWTLAALVVLLIAINIALPYVV-----RDYLNDKLADMGEYRGEVT-DVDLA 54

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +    +   K ++I + +            + +   +  L      V       P +NF 
Sbjct: 55  LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTNPQINFV 113

Query: 116 LSSKGVSNWFQRKSTMDMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
               G +N    ++               + L ++ +  GRI   +  S     +    +
Sbjct: 114 ---DGGNNKQASQTGQGTDWRTQMNKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQV 170

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPL 226
             S   L  +  +  +        +G                +  +  +    +++   +
Sbjct: 171 NASFYNLTNVVDVEGNRDA---EFKGKARLLGHADLESTARFDPFSNFEDFDFRLRATGI 227

Query: 227 AYPIIIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
               + D       ++        V     +  +L        ++    N++    N   
Sbjct: 228 QLKKLNDFSSAYAKFDFNAGDGDVVIEAQANKGQLSGYIKPLLRNVDVFNWQQDVQNKDK 287

Query: 286 SRYK--LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
             ++   ++++  S T   N+ +        L+ S +  + 
Sbjct: 288 GVFRSIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 328


>gi|170022721|ref|YP_001719226.1| hypothetical protein YPK_0470 [Yersinia pseudotuberculosis YPIII]
 gi|169749255|gb|ACA66773.1| conserved hypothetical protein [Yersinia pseudotuberculosis YPIII]
          Length = 1307

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/335 (12%), Positives = 108/335 (32%), Gaps = 38/335 (11%)

Query: 2   LRRVLIGL---GFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56
           +RR+   +   G    VV+    +    +     ++R     +   + G  + V G ++ 
Sbjct: 1   MRRLPKIMFATGATIIVVVALLVSALRMMLPLINEYRPQIVAKIQSVSGIPLDV-GFMQG 59

Query: 57  HILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
               F P++  +DIR    +      +++ +++  +    LL    +  D+   Q  L+ 
Sbjct: 60  TWETFGPTLELRDIRAQMPKAD---LQVQRVTLALDVWQSLLHWRWQFRDLTFYQLQLDL 116

Query: 115 YLSSKGVSNWF--QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISA 171
           + +     N         +  I    L++  ++  RI  +     +    +  L    S+
Sbjct: 117 HTTLDATQNNGSNLETGNVHNIFLRQLDRFDLRNSRISFLTPSGPRAELEIPQLTWLNSS 176

Query: 172 RFLNIISPLSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                   +S+ +I G   + +   +  + +                ++ +Q   +    
Sbjct: 177 TRHRAEGQISLSTINGQHGVVQVRMDLHDNQGILN----------NGTVYMQADNIDLKP 226

Query: 231 IID--LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
            I   L  N   +  +   +   S+        N+ LS  ++  +     +   + +  +
Sbjct: 227 WISRWLQNNTGLDNAEFSLAAWLSIKSGEIYRGNVLLSQGQANWT--VGSNSHQLSVDNF 284

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
            L+     +    D           +LN   +G  
Sbjct: 285 VLEGRRQGNGWQID---------APVLNLKTDGQA 310


>gi|28871602|ref|NP_794221.1| hypothetical protein PSPTO_4467 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28854854|gb|AAO57916.1| conserved protein of unknown function [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 1271

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 91/297 (30%), Gaps = 19/297 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A+  +G  +++ G ++     F
Sbjct: 13  RWSLSLCALILVLAALYVSLGRQLAPLVAEYRVDVETRASSALGIPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P +   D+ + +   G+   +++ + +  +    LL+ ++R+  + +D          +
Sbjct: 72  APVLLAHDVMVGE---GANALRLDRVRVVPDLWASLLARQVRIAHLEVDGLQFTIKQDQE 128

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           G           D   +       +   ++       D    +  L+    A        
Sbjct: 129 GGWAVQGLPLRNDTPLDP---GQLLNQMQMVSHLSLLDSQVTVQPLDA---APLTLTYVN 182

Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235
           LS+ +       +      D +  A  + +       K+        L    +   +   
Sbjct: 183 LSLTTGSYHQRLDARLTLPDGQPFALNVRSRIQASQWKDGEADFYASLPQSDWAKWLPKS 242

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
               W   +    G   ++     + +        ++ G +        I    L +
Sbjct: 243 ATREWTLSRLQAGGDLWMSWGKGTVQSATARLNAPQIKGVY-ADRKPSTIDNLALNA 298


>gi|311277793|ref|YP_003940024.1| hypothetical protein Entcl_0462 [Enterobacter cloacae SCF1]
 gi|308746988|gb|ADO46740.1| hypothetical protein Entcl_0462 [Enterobacter cloacae SCF1]
          Length = 1266

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/322 (10%), Positives = 95/322 (29%), Gaps = 32/322 (9%)

Query: 2   LRRV----LIGLGFLFSVVLVGAFTVPLFID-WTDFREDFERQATLIVGKKIAVKGGIKI 56
           +RR+    L+ +  L   V +    + L +    D+R     + +   G ++     +  
Sbjct: 1   MRRLPGIILLTVATLIVAVALLVSGLRLVLPHLNDWRPQLLAKISQATGHRVE-ASELTA 59

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN- 113
           +     P++  +DI+ +  + G+       +++  +    LL    +   +   Q  +  
Sbjct: 60  NWQNFGPTLDVRDIKTELNDGGT--LSARRVTLALDVWQSLLHMRWQFRQLTFWQLQIRT 117

Query: 114 ---FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                 +++G      +   +  +     +   ++   +  +     +       L+ +N
Sbjct: 118 NTPLQRNTEGE---PLKTDRIGDLFLRQFDHFTLRDSHLSFLTLSGQRAELSIPQLTWVN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITANFPAKNKAISLK--IQL 223
            +   R    +S  S+    G +         +   +  ++       +    L   +Q 
Sbjct: 175 GKNRHRAEGELSLSSLTGQHGVMKVRMDLRDENGLLNEGRVWLQADDIDVKPWLGRWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEK-QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G   K            L+ +     G 
Sbjct: 235 NIALTSARFSLEGWMTLDKGDIASGDVWLKQGGASWKGDKRTHDLVVDNLTAHVSSEQGG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            +         +P++    D K
Sbjct: 295 WQFR-------IPDTRIAIDGK 309


>gi|218696944|ref|YP_002404611.1| hypothetical protein EC55989_3658 [Escherichia coli 55989]
 gi|218353676|emb|CAU99919.1| conserved hypothetical protein; putative membrane protein, putative
           transporter [Escherichia coli 55989]
          Length = 1266

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|45443605|ref|NP_995144.1| hypothetical protein YP_3876 [Yersinia pestis biovar Microtus str.
           91001]
 gi|108809674|ref|YP_653590.1| hypothetical protein YPA_3683 [Yersinia pestis Antiqua]
 gi|108813661|ref|YP_649428.1| hypothetical protein YPN_3501 [Yersinia pestis Nepal516]
 gi|145597593|ref|YP_001161669.1| hypothetical protein YPDSF_0277 [Yersinia pestis Pestoides F]
 gi|153997391|ref|ZP_02022491.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|162419054|ref|YP_001605735.1| hypothetical protein YpAngola_A1193 [Yersinia pestis Angola]
 gi|165927573|ref|ZP_02223405.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165937502|ref|ZP_02226065.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166011368|ref|ZP_02232266.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166214155|ref|ZP_02240190.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401981|ref|ZP_02307464.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420583|ref|ZP_02312336.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167425597|ref|ZP_02317350.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|218930681|ref|YP_002348556.1| hypothetical protein YPO3670 [Yersinia pestis CO92]
 gi|229836818|ref|ZP_04456983.1| putative exported protein [Yersinia pestis Pestoides A]
 gi|229839283|ref|ZP_04459442.1| putative exported protein [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229899846|ref|ZP_04514987.1| putative exported protein [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229904157|ref|ZP_04519268.1| putative exported protein [Yersinia pestis Nepal516]
 gi|45438475|gb|AAS64021.1| putative exported protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|108777309|gb|ABG19828.1| hypothetical protein YPN_3501 [Yersinia pestis Nepal516]
 gi|108781587|gb|ABG15645.1| hypothetical protein YPA_3683 [Yersinia pestis Antiqua]
 gi|115349292|emb|CAL22259.1| putative exported protein [Yersinia pestis CO92]
 gi|145209289|gb|ABP38696.1| hypothetical protein YPDSF_0277 [Yersinia pestis Pestoides F]
 gi|149289028|gb|EDM39108.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|162351869|gb|ABX85817.1| conserved hypothetical protein [Yersinia pestis Angola]
 gi|165914607|gb|EDR33221.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165920467|gb|EDR37744.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165989752|gb|EDR42053.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166204642|gb|EDR49122.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166961389|gb|EDR57410.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167048567|gb|EDR59975.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055611|gb|EDR65404.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|229678275|gb|EEO74380.1| putative exported protein [Yersinia pestis Nepal516]
 gi|229687338|gb|EEO79413.1| putative exported protein [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229695649|gb|EEO85696.1| putative exported protein [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229705761|gb|EEO91770.1| putative exported protein [Yersinia pestis Pestoides A]
 gi|320017163|gb|ADW00735.1| putative exported protein [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 1307

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/335 (12%), Positives = 108/335 (32%), Gaps = 38/335 (11%)

Query: 2   LRRVLIGL---GFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56
           +RR+   +   G    VV+    +    +     ++R     +   + G  + V G ++ 
Sbjct: 1   MRRLPKIMFATGATIIVVVALLVSALRMMLPLINEYRPQIVAKIQSVSGIPLDV-GFMQG 59

Query: 57  HILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
               F P++  +DIR    +      +++ +++  +    LL    +  D+   Q  L+ 
Sbjct: 60  TWETFGPTLELRDIRAQMPKAD---LQVQRVTLALDVWQSLLHWRWQFRDLTFYQLQLDL 116

Query: 115 YLSSKGVSNWF--QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISA 171
           + +     N         +  I    L++  ++  RI  +     +    +  L    S+
Sbjct: 117 HTTLDATQNNGSNLETGNVHNIFLRQLDRFDLRNSRISFLTPSGPRAELEIPQLTWLNSS 176

Query: 172 RFLNIISPLSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                   +S+ +I G   + +   +  + +                ++ +Q   +    
Sbjct: 177 TRHRAEGQISLSTINGQHGVVQVRMDLHDNQGILN----------NGTVYMQADNIDLKP 226

Query: 231 IID--LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
            I   L  N   +  +   +   S+        N+ LS  ++  +     +   + +  +
Sbjct: 227 WISRWLQNNTGLDNAEFSLAAWLSIKSGEVYRGNVLLSQGQANWT--VGSNSHQLSVDNF 284

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
            L+     +    D           +LN   +G  
Sbjct: 285 VLEGRRQGNGWQID---------APVLNLKTDGQA 310


>gi|301383135|ref|ZP_07231553.1| hypothetical protein PsyrptM_10887 [Pseudomonas syringae pv. tomato
           Max13]
          Length = 1271

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 93/297 (31%), Gaps = 19/297 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A   +G  +++ G ++     F
Sbjct: 13  RWSLSLCALILVLAALYVSLGRQLTPLVAEYRVDVETRARSALGIPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P +   D+ + +   G+   +++ + +  +    LL+ ++R+  + +D          +
Sbjct: 72  APVLLAHDVMVGE---GANALRLDRVRVVPDLWASLLARQVRIAHLEVDGLQFTIKQDQE 128

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           G           D    + L ++ +   ++       D    +  L+    A        
Sbjct: 129 GGWAVQGLPLRNDTP--LDLGQL-LNQMQMVSHLSLLDSQVTVQPLDA---APLTLTYVN 182

Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235
           LS+ +       +      D +  A  + +       K+        L    +   +   
Sbjct: 183 LSLTTGSYHQRLDARLTLPDGQPFALNVRSRIQASQWKDGEADFYASLPQSDWAKWLPKS 242

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
               W   +    G   ++     + +        ++ G +        I    L +
Sbjct: 243 ATREWTLSRLQAGGDLWMSWGKGTVQSATARLNAPQIKGVY-ADRKPSTIDNLALNA 298


>gi|51597851|ref|YP_072042.1| hypothetical protein YPTB3560 [Yersinia pseudotuberculosis IP
           32953]
 gi|186897045|ref|YP_001874157.1| hypothetical protein YPTS_3747 [Yersinia pseudotuberculosis PB1/+]
 gi|51591133|emb|CAH22798.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
 gi|186700071|gb|ACC90700.1| conserved hypothetical protein [Yersinia pseudotuberculosis PB1/+]
          Length = 1307

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/335 (12%), Positives = 108/335 (32%), Gaps = 38/335 (11%)

Query: 2   LRRVLIGL---GFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56
           +RR+   +   G    VV+    +    +     ++R     +   + G  + V G ++ 
Sbjct: 1   MRRLPKIMFATGATIIVVVALLVSALRMMLPLINEYRPQIVAKIQSVSGIPLDV-GFMQG 59

Query: 57  HILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
               F P++  +DIR    +      +++ +++  +    LL    +  D+   Q  L+ 
Sbjct: 60  TWETFGPTLELRDIRAQMPKAD---LQVQRVTLALDVWQSLLHWRWQFRDLTFYQLQLDL 116

Query: 115 YLSSKGVSNWF--QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISA 171
           + +     N         +  I    L++  ++  RI  +     +    +  L    S+
Sbjct: 117 HTTLDATQNNGSNLETGNVHNIFLRQLDRFDLRNSRISFLTPSGPRAELEIPQLTWLNSS 176

Query: 172 RFLNIISPLSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                   +S+ +I G   + +   +  + +                ++ +Q   +    
Sbjct: 177 TRHRAEGQISLSTINGQHGVVQVRMDLHDNQGILN----------NGTVYMQADNIDLKP 226

Query: 231 IID--LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
            I   L  N   +  +   +   S+        N+ LS  ++  +     +   + +  +
Sbjct: 227 WISRWLQNNTGLDNAEFSLAAWLSIKSGEIYRGNVLLSQGQANWT--VGSNSHQLSVDNF 284

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
            L+     +    D           +LN   +G  
Sbjct: 285 VLEGRRQGNGWQID---------APVLNLKTDGQA 310


>gi|330974108|gb|EGH74174.1| hypothetical protein PSYAR_26839 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 355

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/337 (9%), Positives = 97/337 (28%), Gaps = 24/337 (7%)

Query: 2   LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++R     L  L  L  +++     +P  +     R+    +   +   +  +   + + 
Sbjct: 1   MKRRYSWPLWTLAALVVLLIAVNIALPYLV-----RDYLNDKLADMGDYRGEIT-DVDLA 54

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +    +   K ++I + +            + +   +  L      V       P +NF 
Sbjct: 55  LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTGPQINFV 113

Query: 116 LSSKGVSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
                  +   + +        +  + L ++ +  GRI   +  S     +    +  S 
Sbjct: 114 DGGSKQDSQTGQGTDWRTQMNKLLPITLNELRIDDGRITFNNFNSTPKVKIEADQVNASI 173

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230
             L  +  +  +        +G                +  +  +    K++   +    
Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESTARFDPFSNFEDFDFKLRATGIQLKK 230

Query: 231 IIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
           + D       ++        V     D  +L        ++    N++    N     ++
Sbjct: 231 LNDFSSAYGKFDFNAGDGDVVIEAQADKGQLKGYIKPLLRNVDVFNWQQDVENKDKGVFR 290

Query: 290 --LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
              ++++  S T   N+ +        L+ S +  + 
Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327


>gi|218706859|ref|YP_002414378.1| hypothetical protein ECUMN_3719 [Escherichia coli UMN026]
 gi|293406848|ref|ZP_06650774.1| hypothetical protein ECGG_02158 [Escherichia coli FVEC1412]
 gi|298382589|ref|ZP_06992186.1| yhdP protein [Escherichia coli FVEC1302]
 gi|218433956|emb|CAR14873.1| conserved hypothetical protein; putative membrane protein, putative
           transporter [Escherichia coli UMN026]
 gi|291426854|gb|EFE99886.1| hypothetical protein ECGG_02158 [Escherichia coli FVEC1412]
 gi|298277729|gb|EFI19245.1| yhdP protein [Escherichia coli FVEC1302]
          Length = 1266

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|218555809|ref|YP_002388722.1| hypothetical protein ECIAI1_3387 [Escherichia coli IAI1]
 gi|218362577|emb|CAR00201.1| conserved hypothetical protein; putative membrane protein, putative
           transporter [Escherichia coli IAI1]
          Length = 1266

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|330900107|gb|EGH31526.1| hypothetical protein PSYJA_22124 [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 355

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/329 (9%), Positives = 94/329 (28%), Gaps = 20/329 (6%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65
           L  L  L  +++     +P  +     R+    +   +   +  +   + + +    +  
Sbjct: 9   LWTLAALIVLLIAVNIALPYLV-----RDYLNDKLADMGDYRGEIT-DVDLALWRG-AYR 61

Query: 66  FKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
            K ++I + +            + +   +  L      V       P +NF        +
Sbjct: 62  IKGLKIVKTDGKVPVPFFDAPMIELAVSWNSLWYDHAVVAKALFTDPQINFVDGGSKQDS 121

Query: 124 WFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
              + +        +  + L ++ +  GRI   +  S     +    +  S   L  +  
Sbjct: 122 QTGQGTDWRTQMNKLLPITLNELRIDNGRITFNNFNSKPKVKIEADQVNASIYNLTNVVD 181

Query: 180 LSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPIIIDL-FGN 237
           +  +        +G                +  +  +    K++   +    + D     
Sbjct: 182 VEGNRDA---EFKGKARLLGHADLESSARFDPFSNFEDFDFKLRATGIQLKKLNDFSSAY 238

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK--LQSILP 295
             ++        V     D  +L        ++    N++    N     ++   ++++ 
Sbjct: 239 GKFDFNAGDGDVVIEAQADKGQLKGYIKPLLRNVDVFNWQQDVENKDKGVFRSIWEALVG 298

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAES 324
            S T   N+ +        L+ S +  + 
Sbjct: 299 TSETVLKNQRENQFATRVDLSGSVHQQDI 327


>gi|289627555|ref|ZP_06460509.1| hypothetical protein PsyrpaN_20902 [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289646983|ref|ZP_06478326.1| hypothetical protein Psyrpa2_04407 [Pseudomonas syringae pv.
           aesculi str. 2250]
          Length = 1271

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 95/284 (33%), Gaps = 22/284 (7%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A+  +G  +++ G ++     F
Sbjct: 13  RWGLSLCALVLVLAALYVSLGRQLTPLVAEYRVDVETRASSALGMPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P     D+ + +   GS   +++ + +  +    LL+ ++R+  + +D          +
Sbjct: 72  APVFLAHDVMVGE---GSSAVRLDRVRVVPDLWESLLARQVRIAHLEVDGLQFMLRQDKE 128

Query: 120 GVSNWFQRKSTMDMIHNV--ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
           G  +        D   +   +LE++ +    + +  Q + Q +  + L L          
Sbjct: 129 GNWSVQGLPVRNDSPFDPGQVLEQMQMVSHLLLLDSQVTVQPFDAAPLTL--------TY 180

Query: 178 SPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIID 233
             LS+ +       +      D +  A  + +       K+    +   L    +   + 
Sbjct: 181 VNLSLATGSYHQRLDARLTLPDGQPFALNVRSRIQASQWKDGEADVYASLPQSDWARWLP 240

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
                 W   +    G   ++     + +         + G + 
Sbjct: 241 KSLTREWTLSKLQAGGELWMSWGKGTVQSATARLNAPHVKGVYA 284


>gi|284923261|emb|CBG36355.1| possible exported protein [Escherichia coli 042]
          Length = 1266

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|213966625|ref|ZP_03394776.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
 gi|302063723|ref|ZP_07255264.1| hypothetical protein PsyrptK_27384 [Pseudomonas syringae pv. tomato
           K40]
 gi|302133803|ref|ZP_07259793.1| hypothetical protein PsyrptN_20534 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213928475|gb|EEB62019.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
          Length = 1271

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 93/297 (31%), Gaps = 19/297 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A   +G  +++ G ++     F
Sbjct: 13  RWSLSLCALILVLAALYVSLGRQLTPLVAEYRVDVETRARSALGIPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P +   D+ + +   G+   +++ + +  +    LL+ ++R+  + +D          +
Sbjct: 72  APVLLAHDVMVGE---GANALRLDRVRVVPDLWASLLARQVRIAHLEVDGLQFTIKQDQE 128

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           G           D    + L ++ +   ++       D    +  L+    A        
Sbjct: 129 GGWAVQGLPLRNDTP--LDLGQL-LNQMQMVSHLSLLDSQVTVQPLDA---APLTLTYVN 182

Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235
           LS+ +       +      D +  A  + +       K+        L    +   +   
Sbjct: 183 LSLTTGSYHQRLDARLTLPDGQPFALNVRSRIQASQWKDGEADFYASLPQSDWAKWLPKS 242

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
               W   +    G   ++     + +        ++ G +        I    L +
Sbjct: 243 ATREWTLSRLQAGGDLWMSWGKGTVQSATARLNAPQIKGVY-ADRKPSTIDNLALNA 298


>gi|257487635|ref|ZP_05641676.1| hypothetical protein PsyrptA_30468 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|330894721|gb|EGH27382.1| hypothetical protein PSYMO_40180 [Pseudomonas syringae pv. mori
           str. 301020]
 gi|330989370|gb|EGH87473.1| hypothetical protein PLA107_30407 [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331013116|gb|EGH93172.1| hypothetical protein PSYTB_26311 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 355

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/337 (9%), Positives = 96/337 (28%), Gaps = 24/337 (7%)

Query: 2   LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++R     L  L  L  +++     +P  +     R+    +   +   +  +   + + 
Sbjct: 1   MKRRYSWPLWTLAALVVLLIAINIALPYLV-----RDYLNDKLADMGDYRGEIT-DVDLA 54

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +    +   K ++I + +            + +   +  L      V       P +NF 
Sbjct: 55  LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTGPQINFV 113

Query: 116 LSSKGVSNWFQRKSTM----DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
                 ++   + +      D +  + L ++ +  GRI   +  S     +    +  S 
Sbjct: 114 DGGSKQNSQTGQGTDWRTQMDKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQVNASI 173

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230
             L  +  +  +        +G                +  +  +    K++   +    
Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESTARFDPFSNFEDFDFKLRATGIQLKK 230

Query: 231 IIDLF---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
           + D     G   +N                       L       + +  + + +  + R
Sbjct: 231 LNDFSSAYGKFDFNAGDGDLVIEAQADKGQLSGYIKPLLRNVDVFNWHQDVENKDKGVFR 290

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
              ++++  S T   N+ +        L+ S +  + 
Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327


>gi|331670068|ref|ZP_08370913.1| conserved hypothetical protein [Escherichia coli TA271]
 gi|331679319|ref|ZP_08379991.1| conserved hypothetical protein [Escherichia coli H591]
 gi|332279926|ref|ZP_08392339.1| conserved membrane protein predicted transporter [Shigella sp. D9]
 gi|331062981|gb|EGI34895.1| conserved hypothetical protein [Escherichia coli TA271]
 gi|331073384|gb|EGI44707.1| conserved hypothetical protein [Escherichia coli H591]
 gi|332102278|gb|EGJ05624.1| conserved membrane protein predicted transporter [Shigella sp. D9]
          Length = 1266

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|66044827|ref|YP_234668.1| hypothetical protein Psyr_1582 [Pseudomonas syringae pv. syringae
           B728a]
 gi|63255534|gb|AAY36630.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae
           B728a]
          Length = 355

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/337 (9%), Positives = 96/337 (28%), Gaps = 24/337 (7%)

Query: 2   LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++R     L  L  L  +++     +P  +     R+    +   +   +  +   + + 
Sbjct: 1   MKRRYSWPLWTLAALVVLLIAVNIALPYLV-----RDYLNDKLADMGDYRGEIT-DVDLA 54

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +    +   K ++I + +            + +   +  L      V       P +NF 
Sbjct: 55  LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTGPQINFV 113

Query: 116 LSSKGVSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
                  +   + +        +  + L ++ +  GRI   +  S     +    +  S 
Sbjct: 114 DGGSKQDSQTGQGTDWRTQMNKLLPITLNELRIDDGRITFNNFNSTPKVKIEADQVNASI 173

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230
             L  +  +  +        +G                   +  +    K++   +    
Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESTARFEPFSNFEDFDFKLRATGIQLKK 230

Query: 231 IIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
           + D       ++        V     D  +L        ++    N++    N     ++
Sbjct: 231 LNDFSSAYGKFDFNAGDGDVVIEAQADKGQLKGYIKPLLRNVDVFNWQQDVENKDKGVFR 290

Query: 290 --LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
              ++++  S T   N+ +        L+ S +  + 
Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327


>gi|285019219|ref|YP_003376930.1| hypothetical protein XALc_2459 [Xanthomonas albilineans GPE PC73]
 gi|283474437|emb|CBA16938.1| hypothetical predicted membrane protein [Xanthomonas albilineans]
          Length = 1290

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/329 (10%), Positives = 96/329 (29%), Gaps = 38/329 (11%)

Query: 7   IGLGFLFSVVLVGAF--TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSV 64
           + +G +   ++VGA    +PL        +      +   G+ I             P +
Sbjct: 20  VAIGLVCVALVVGALSQALPLV---QRHPQQVAAWLSARAGQPIRFDRLETAWTRRGPLL 76

Query: 65  FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124
               +RI   +      +I    +       +       ++ +    LN   +  G  + 
Sbjct: 77  RLDGLRIGGGDG----VRIGQAEILVSMYTGMLPGRSFTELRLRGLALNLLRADDGNWSV 132

Query: 125 FQRKSTMDMIHNVI----LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
               ++      +     L ++ + GGR+ +     D    +  +++++      +    
Sbjct: 133 QGLPTSGQGGDPLDSLQGLGELQLIGGRLAVSAPSLDVAVQVPKIDMRLRVNGDRLR--- 189

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNLF 239
                   V  +  G+         +  +    +  + + ++ +    +  ++ + G + 
Sbjct: 190 --------VGVQSWGDMHQPPLTAVLNIDRQRGSGGLYVAVRPMDLSVWSGLLHVAG-IQ 240

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
                        +       L ++ + +  RL G   ++DG  R  +    ++   +  
Sbjct: 241 VQGGAGEIQAWLQLQQYRVAGLTVQAALRDLRLRGA-TLADGRTR-PQLLFTTLRTTARW 298

Query: 300 -DEDN---------KTKVSQDEENLLNFS 318
              D          K ++ Q         
Sbjct: 299 RQIDGAGGWRLDVPKLQIDQAGLPPQRLD 327


>gi|126173920|ref|YP_001050069.1| hypothetical protein Sbal_1689 [Shewanella baltica OS155]
 gi|125997125|gb|ABN61200.1| protein of unknown function DUF748 [Shewanella baltica OS155]
          Length = 1158

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/384 (11%), Positives = 106/384 (27%), Gaps = 59/384 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR ++       S V      +P  I           + + ++G+ + + G I+I+    
Sbjct: 19  LRVLVYLTAVYLSYVCTLGLILPYAITT-----LAPEKLSALLGRPVTL-GDIRINPF-N 71

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSS-K 119
             V    + I +K+     + +  +     F   + +    + +++I  P+ +      K
Sbjct: 72  FKVEIDQLAIKEKD-EKPFAGLAQVKFEVNFWQSVFNRAAVIENIHIQAPYAHIIRLERK 130

Query: 120 GVSNW-----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           G + +                     +       V+L +  +  G+    D+ +      
Sbjct: 131 GKAGFNFDDILQTLNEHSSASTETTPAEASAPVRVLLSQFVLDAGQFNFDDKITHAQVNY 190

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
            ++NL++S      +                         A   +     K         
Sbjct: 191 PNINLKLSQLDTEYLMS-----------------------ALSASVAPATKANKTEANPT 227

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
               +        G+     K   Y+   S        L  +      +++G+  I+   
Sbjct: 228 PNAQSASDTGSGSGSQVMPIKHNHYAIQLSDDHAGEISLQGQFQLFPIKVAGDVHIAKLK 287

Query: 283 V----RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE-----SMHDLNETDF 333
           +    R    + +  L +       + +V   E   L  + N  +        +  E   
Sbjct: 288 LTPLWRFIDDQFKPALTDGEISAKTQYQVDLAENGELQITSNNGQFIVEKLNFNDQERSV 347

Query: 334 FEEEEKKNKNDDLKKDDIQYSVNK 357
            +          +     Q  +NK
Sbjct: 348 VKLPIFALDGISMDLKQQQVHINK 371


>gi|331016673|gb|EGH96729.1| hypothetical protein PLA106_11585 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 1271

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 91/297 (30%), Gaps = 19/297 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A+  +G  +++ G ++     F
Sbjct: 13  RWSLSLCALILVLAALYVSLGRQLAPLVAEYRVDVETRASSALGIPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P +   D+ + +   G+   +++ + +  +    LL+ ++R+  + +D          +
Sbjct: 72  APVLLAHDVMVGE---GANALRLDRVRVVPDLWASLLARQVRIAHLEVDGLQFTIKQDQE 128

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           G           D   +       +   ++       D    +  L+    A        
Sbjct: 129 GGWAVQGLPLRNDTPLDP---GQLLNQMQMVSHLSLLDSQVTVQPLDA---APLTLTYVN 182

Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235
           LS+ +       +      D +  A  + +       K+        L    +   +   
Sbjct: 183 LSLTTGSYHQRLDARLTLPDGQPFALNVRSRIQASQWKDGEADFYASLPQSDWAKWLPKS 242

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
               W   +    G   ++     + +        ++ G +        I    L +
Sbjct: 243 ATREWTLSRLQAGGDLWMSWGKGTVQSATARLNAPQIKGVY-ADRKPCTIDNLALNA 298


>gi|163856278|ref|YP_001630577.1| hypothetical protein Bpet1968 [Bordetella petrii DSM 12804]
 gi|163260006|emb|CAP42307.1| conserved hypothetical protein [Bordetella petrii]
          Length = 1233

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/312 (8%), Positives = 79/312 (25%), Gaps = 26/312 (8%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKI 83
           +  +   +R   E  A+  +G ++ + G ++       P +    + I  ++       +
Sbjct: 61  VLPNIDQWRPRIEAYASEALGARVEI-GRLQADWRGLNPRLKLTALSIYDQQP-EPVLTL 118

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI--------- 134
             +S    +  +L     +  + ID P L     + G      +   ++           
Sbjct: 119 PSVSAVLGWRSVLLLSPSLLSLRIDGPELRVRRDAGGRLWVAGQSIDLNAPHDAGRSSRL 178

Query: 135 --HNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISARFLNIISPLSID---SIKGS 188
                    + +    +   D+        L +++L++    L     LS +   ++   
Sbjct: 179 VQWLGSQRDLALANATVHWNDEYRQAPEVTLRNVSLRLYNGALAHRFALSAEPPPALARE 238

Query: 189 VIAEGTGNFDNKRSAFKITANFPAKN----KAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
           +   G    +   +  +             +  +    L              L   E+ 
Sbjct: 239 LSLRGRFTRNPLLTGRQRWTGELYAEVDDAEPSAWAPWLAVPRIAGRAATRAWLTL-EQG 297

Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK---LQSILPNSSTDE 301
            +       A    +      +          ++      + ++    L      +    
Sbjct: 298 AVTDVTADAALRDVRWQAAGDATAIGLAGATLRVQGAPGDVVQFADVPLARGEDGAGMAL 357

Query: 302 DNKTKVSQDEEN 313
             +         
Sbjct: 358 RGELTGLSANLP 369


>gi|157157619|ref|YP_001464718.1| hypothetical protein EcE24377A_3728 [Escherichia coli E24377A]
 gi|191168183|ref|ZP_03029979.1| conserved hypothetical protein [Escherichia coli B7A]
 gi|209920716|ref|YP_002294800.1| hypothetical protein ECSE_3525 [Escherichia coli SE11]
 gi|307314996|ref|ZP_07594584.1| putative transporter [Escherichia coli W]
 gi|157079649|gb|ABV19357.1| conserved hypothetical protein TIGR02099 [Escherichia coli E24377A]
 gi|190901791|gb|EDV61544.1| conserved hypothetical protein [Escherichia coli B7A]
 gi|209913975|dbj|BAG79049.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|306905579|gb|EFN36111.1| putative transporter [Escherichia coli W]
 gi|315062545|gb|ADT76872.1| conserved membrane protein, predicted transporter [Escherichia coli
           W]
 gi|323376867|gb|ADX49135.1| hypothetical protein EKO11_0479 [Escherichia coli KO11]
          Length = 1266

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|82545525|ref|YP_409472.1| hypothetical protein SBO_3142 [Shigella boydii Sb227]
 gi|81246936|gb|ABB67644.1| Uncharacterized membrane protein [Shigella boydii Sb227]
          Length = 1266

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|298488477|ref|ZP_07006508.1| Possible exported protein [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298157102|gb|EFH98191.1| Possible exported protein [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 1271

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/287 (10%), Positives = 87/287 (30%), Gaps = 28/287 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A+  +G  +++ G ++     F
Sbjct: 13  RWGLSLCALVLVLAALYVSLGRQLTPLVAEYRVDVETRASSALGMPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P     D+ + +   GS   +++ + +  +    LL+ ++R+  + +D          +
Sbjct: 72  APVFLAHDVMVGE---GSSAVRLDRVRVVPDLWESLLARQVRIAHLEVDGLQFMLRQDKE 128

Query: 120 GVSNWFQRKSTMDMIHNVI--------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
           G  +        D   +          +  + +   ++ +          L+ +NL ++ 
Sbjct: 129 GNWSVQGLPVRNDSPFDPGQVLEQMQMVSHLSLLDSQVTV-QPFDAAPLTLTYVNLSLAT 187

Query: 172 RFLNIISPLSIDSIKG-SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
              +      +    G              +           K+    +   L    +  
Sbjct: 188 GSYHQRLDARLTLPDGQPFALNVRSRIQASQ----------WKDGEADVYASLPQSDWAR 237

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
            +       W   +    G   ++     + +         + G + 
Sbjct: 238 WLPKSLTREWTLSKLQAGGELWMSWGKGTVQSATARLNAPHVKGVYA 284


>gi|146305896|ref|YP_001186361.1| membrane protein-like protein [Pseudomonas mendocina ymp]
 gi|145574097|gb|ABP83629.1| membrane protein-like protein [Pseudomonas mendocina ymp]
          Length = 1273

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/275 (12%), Positives = 86/275 (31%), Gaps = 33/275 (12%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
           +R + E  A+  +G  + + G ++       P +   D++I  ++ G     ++ + +  
Sbjct: 43  YRLEAEDHASEALGVPVRI-GRLEGRWQGFAPVLVAHDVQIGAQDQG---LGLDRVQLLP 98

Query: 91  E-FLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI--------LEK 141
           +    LL+ + R+  +  D   LN    ++G  +            +V         + +
Sbjct: 99  DMLGSLLARQPRIAHLQFDGLQLNLQEDAEGAWHLQGWPERDGPDADVQQVLEQLRIVRR 158

Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNK 200
           I +   RI +      +   LS +NL +                + S   +G     D +
Sbjct: 159 ISLFDSRIVL-QPRDQEPLLLSYVNLSLGY-------------GRNSQRLDGRLLLPDGQ 204

Query: 201 RSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257
             A ++         +     L + L    +   +       W+ ++    G   +    
Sbjct: 205 PLALRLRTRMQPQSWREAEAELYLSLPQSDWAAWLPQRLTGDWHLERLQAGGELWLKARG 264

Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
             L    L     ++ G        + +      +
Sbjct: 265 LALQQGALRLHAPQVVGA-HGEQEPITLDDLAFNA 298


>gi|323173497|gb|EFZ59126.1| hypothetical protein ECLT68_1812 [Escherichia coli LT-68]
          Length = 1266

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|269958274|ref|YP_003328061.1| hypothetical protein ACIS_00024 [Anaplasma centrale str. Israel]
 gi|269848103|gb|ACZ48747.1| hypothetical protein ACIS_00024 [Anaplasma centrale str. Israel]
          Length = 905

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/334 (13%), Positives = 100/334 (29%), Gaps = 30/334 (8%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKK---IAVKGGIKIHIL 59
           + L  L     VV      VP  +DW   + E   +Q     G     +   G I+  +L
Sbjct: 10  KFLGRLCCCVLVVFAALAFVPYLVDWNAHYGEYVFKQLGAATGSSGAVVKAIGNIEGSLL 69

Query: 60  PFPSVFFKDIRI---DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
             P +  +++ +   +     +    I+ + +  + L +L GE +V  + +         
Sbjct: 70  -LPKLTVRNLYVECSEDAAGCAGTLSIDRMELSVDPLSILMGEPKVRTISLYG----LRT 124

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
           S  G+      ++   + H  I +   V GG +       + V+  S     I +    +
Sbjct: 125 SVGGLVGMVGSQTKSGLGHVRIFDSAVVTGGVVGASASAYNTVHVKS---ATIKSSGSAL 181

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP--LAYPIIIDL 234
                +       +           S  K+  + P  +  +S           +    ++
Sbjct: 182 FGDAVLKIGGTKYLLSSKLERSAAGSTVKVELHSPNTSMVLSGNGAGQGLFDDFGARFEV 241

Query: 235 FG-NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
              NL    +       + + G  +    + LSA      G+         +    ++S 
Sbjct: 242 KTENLSELAQTVAVVTNYRLLGSVASAEEMVLSAGIKAAKGS------GFEVKDLTMKSK 295

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
                       +++         S N +    D
Sbjct: 296 S------ISGTLELACTYAPFCTTSLNFSSIDLD 323


>gi|91790484|ref|YP_551436.1| hypothetical protein Bpro_4655 [Polaromonas sp. JS666]
 gi|91699709|gb|ABE46538.1| conserved hypothetical protein [Polaromonas sp. JS666]
          Length = 1441

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/315 (11%), Positives = 84/315 (26%), Gaps = 29/315 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           R  L  +   + +  +    +  +I     +FR   E +A+  +G  + +          
Sbjct: 47  RFSLWLVASAWLLFGLSWLVLHGWIVPRIGEFRPRLELEASKALGVPVRIGQITAHSQGM 106

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            PS   + + +   +      ++  L        LL   +    +YID+P L    ++ G
Sbjct: 107 IPSFELQGVALLDAQG-REALRLPRLLGTLSPTSLL--GLGFEQLYIDKPELEILRTADG 163

Query: 121 VSNWFQRKSTMDMI--------HNVILEKIHVKGGRIKIIDQ-ESDQVYFLSDLNLQISA 171
                    + D                +  ++GG ++  D+        L+ ++  +  
Sbjct: 164 KIYVGGLDVSRDQTAGNRAMADWFFSQTEFVIRGGTVRWTDELRQAPPLALTQVDWVMKN 223

Query: 172 RFLNIISPLSIDSIKGS---VIAEGTGN---FDNKRSAFKITANFPAKNKA----ISLKI 221
                +  L      G        G             F   A              +K 
Sbjct: 224 ARHRHLMRLDATPPAGWGDRFTLRGIFRQSLLSRDAGDFSAWAGQLYAESGRVDLSRIKQ 283

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK----KSRLSGNFK 277
                +  + +   G+        +  G  +       L +++                 
Sbjct: 284 YAGLESIGLDLT-RGHGALRAWAEVSKGQITGGTADVALQDVDARLGRKLEPLAFDSVAG 342

Query: 278 ISDGNVRISRYKLQS 292
              G  R++ +   +
Sbjct: 343 RFGGRQRVNGFDFNT 357


>gi|227887960|ref|ZP_04005765.1| membrane protein [Escherichia coli 83972]
 gi|227835356|gb|EEJ45822.1| membrane protein [Escherichia coli 83972]
          Length = 1263

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G  N     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|300991030|ref|ZP_07179451.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 45-1]
 gi|301047911|ref|ZP_07194958.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           185-1]
 gi|300300254|gb|EFJ56639.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           185-1]
 gi|300406951|gb|EFJ90489.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 45-1]
 gi|315294785|gb|EFU54128.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           153-1]
          Length = 1263

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G  N     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|289628926|ref|ZP_06461880.1| hypothetical protein PsyrpaN_27941 [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289651092|ref|ZP_06482435.1| hypothetical protein Psyrpa2_25644 [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298486149|ref|ZP_07004212.1| hypothetical protein PSA3335_1575 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298159156|gb|EFI00214.1| hypothetical protein PSA3335_1575 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|330868076|gb|EGH02785.1| hypothetical protein PSYAE_12663 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 355

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/337 (10%), Positives = 99/337 (29%), Gaps = 24/337 (7%)

Query: 2   LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++R     L  L  L  +++     +P  +     R+    +   +   +  +   + + 
Sbjct: 1   MKRRYSWPLWTLAALVVLLIAINIALPYLV-----RDYLNDKLADMGDYRGEIT-DVDLA 54

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +    +   K ++I + +            + +   +  L      V       P +NF 
Sbjct: 55  LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTDPQINFV 113

Query: 116 LSSKGVSNWFQRKSTM----DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
                 ++   + +      D +  + L ++ +  GRI   +  S     +    +  S 
Sbjct: 114 DGGSKQNSQTGQGTDWRTQMDKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQVNASI 173

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPI 230
             L  +  +  +        +G                +  +  +    K++   +    
Sbjct: 174 YNLTNVVDVEGNRDA---EFKGKARLLGHADLESTARFDPFSNFEDFDFKLRATGIQLKK 230

Query: 231 IIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
           + D       ++        V     D  +L        ++    N++    N     ++
Sbjct: 231 LNDFSSAYGKFDFNAGDGDVVIEAQADKGQLKGYIKPLLRNVDVFNWQQDVENKDKGVFR 290

Query: 290 --LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
              ++++  S T   N+ +        L+ S +  + 
Sbjct: 291 SIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 327


>gi|187731278|ref|YP_001881636.1| hypothetical protein SbBS512_E3277 [Shigella boydii CDC 3083-94]
 gi|187428270|gb|ACD07544.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
          Length = 1266

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G  N     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|170766061|ref|ZP_02900872.1| conserved hypothetical protein [Escherichia albertii TW07627]
 gi|170125207|gb|EDS94138.1| conserved hypothetical protein [Escherichia albertii TW07627]
          Length = 1266

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 92/323 (28%), Gaps = 34/323 (10%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIEDATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYI--DQ 109
           +        P++  +DIR + K+ G     ++ +++  +    LL    +  D+     +
Sbjct: 57  LSASWQNFGPTLEARDIRAELKDGGE--FSVKRVTLALDIWQSLLHMRWQFRDLTFWQLR 114

Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDL 165
              N  +SS G  N       +  +     +   ++   +  +     +       LS L
Sbjct: 115 FRTNTPISSSG-GNDSLEAGHISNLFLHQFDHFDLRDSEVSFLTPSGQRAELAIPQLSWL 173

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQ 222
           N     R    +S  S+    G +        D    S  ++       +    L   IQ
Sbjct: 174 NNPRRHRAEGQVSLSSLTGQHGVMQVRMDLRDDEGVLSDGRVWLQADNIDLKPWLGKWIQ 233

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG 281
                      L G +  ++             G          S     L+ +      
Sbjct: 234 DNIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHSLSVDNLTAHITREHP 293

Query: 282 NVRISRYKLQSILPNSSTDEDNK 304
             + S       +P++    D K
Sbjct: 294 GWQFS-------IPDTRITMDGK 309


>gi|330968125|gb|EGH68385.1| hypothetical protein PSYAC_26511 [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 356

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/341 (9%), Positives = 98/341 (28%), Gaps = 31/341 (9%)

Query: 2   LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++R     L  L  L  +++     +P  +     R+    +   +   +  +   + + 
Sbjct: 1   MKRRYSWPLWTLAALVVLLIAINIALPYVV-----RDYLNDKLADMGEYRGELT-DVDLA 54

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +    +   K ++I + +            + +   +  L      V       P +NF 
Sbjct: 55  LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTNPQINFV 113

Query: 116 LSSKGVSNWFQRKSTMDMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
               G +N    ++               + L ++ +  GRI   +  S     +    +
Sbjct: 114 ---DGGNNKQASQTGQGTDWRTQMNKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQV 170

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPL 226
             S   L  +  +  +        +G                +  +  +    +++   +
Sbjct: 171 NASFYNLTNVVDVEGNRDA---EFKGKARLLGHADLESTARFDPFSNFEDFDFRLRATGI 227

Query: 227 AYPIIIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
               + D       ++        V     +  +L        ++    N++    N   
Sbjct: 228 QLKKLNDFSSAYAKFDFNAGDGDIVIEAQANKGQLSGYIKPLLRNVDVFNWQQDVQNKDK 287

Query: 286 SRYK--LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
             ++   ++++  S T   N+ +        L+ S +  + 
Sbjct: 288 GVFRSIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 328


>gi|323966424|gb|EGB61858.1| adhesin HecA family protein [Escherichia coli M863]
          Length = 1263

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 87/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISAR 172
               + G  N     S +  +     +   ++   +  +     +    +  L      R
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 173 FLNIISPLSIDSIKGS---VIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
                  +S+ S+ G    +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGQVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|324009062|gb|EGB78281.1| hypothetical protein HMPREF9532_01181 [Escherichia coli MS 57-2]
          Length = 1263

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G  N     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|331659525|ref|ZP_08360467.1| conserved hypothetical protein [Escherichia coli TA206]
 gi|315300896|gb|EFU60116.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 16-3]
 gi|331054107|gb|EGI26136.1| conserved hypothetical protein [Escherichia coli TA206]
          Length = 1263

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G  N     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|218247460|ref|YP_002372831.1| hypothetical protein PCC8801_2674 [Cyanothece sp. PCC 8801]
 gi|218167938|gb|ACK66675.1| protein of unknown function DUF490 [Cyanothece sp. PCC 8801]
          Length = 1975

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/381 (10%), Positives = 106/381 (27%), Gaps = 17/381 (4%)

Query: 1   MLRRVL----IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +LRR+     I +G     V++  +T              E Q + I+ + I +      
Sbjct: 18  LLRRLTHPATIAIGVGSVTVVLIGYTGLRLFLKEYLPPWLETQVSYIINRPIKIGELQDF 77

Query: 57  HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
            +     +      I    D   +  I  ++++   L ++        +   +  ++ + 
Sbjct: 78  SL---TGLSLGSTSIPVTPDNPNQITISKINVKFNPLAVVFRRTLPITISPQKVDVDVFQ 134

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
           +++G       + +   +   +  K+      +    ++             +       
Sbjct: 135 NAQGQLLTIDVEESKLPVKLDLTFKVEKADINVFPYQKKQPLEVQFKGEARYLEEDVAKW 194

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
              L++  +   V  +G        S  K+       +   S  I          +    
Sbjct: 195 QYDLNLALLNSQVKLQGETICSTTESNIKLNVEKLDFSSLTSFIIDFPLRLNSGNVQANL 254

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS--GNFKISDGNVRISRYKLQSIL 294
           N+        + G  +        L  ++           N    +  V +   +L    
Sbjct: 255 NIQSP-SLKEFQGTQAQGNVNLSNLQGQVKPLTKPFEVLSNISFKNNKVLVKNARLTIGQ 313

Query: 295 PNSSTDEDNKTKVSQDEENLLNFS-ENGAESMHDLNETDFFEEEEKKNKNDDLK----KD 349
             +      +   +     ++N     G      L  +   + E + + N  L     K 
Sbjct: 314 ITAK--LGGEYDWNTGSNLVVNLEGLTGKNLRQVLPPSFPLQVEGELDANFKLTGQLNKP 371

Query: 350 DIQYSVNKKEEKDNSHDKENQ 370
            ++  +N K+       K +Q
Sbjct: 372 LLKGKINNKKAVTVLKTKFDQ 392


>gi|254456311|ref|ZP_05069740.1| conserved hypothetical protein [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083313|gb|EDZ60739.1| conserved hypothetical protein [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 500

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/349 (13%), Positives = 116/349 (33%), Gaps = 27/349 (7%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           +R+  G   +  VV+    ++P F +  +     + Q +  +    A+      +  P P
Sbjct: 45  KRIF-GFISVLLVVVFSYLSLPYFYNTNNLVNKIKNQLSKNLNFNFAINNDFTYNFFPKP 103

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +  FK+ +    +D    + +E + +      L S    + ++ ID   +     +  ++
Sbjct: 104 NFVFKETKFY--DDKKNFADVERIKIYISPKYLFS----LDNIKIDD--VILNNVNFNLN 155

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
           N      T  + +N       +   +I   + ++D ++  S   L+      +  + L  
Sbjct: 156 NKNYNFFTKLLNNNFSNFNFEINDSKIFYRNIDNDVLFINSVNQLKYYFDLKDQKNTLLA 215

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242
           +    ++        D          NF   N  +  +           I    N   +E
Sbjct: 216 NCEIFNLPYTIELKDDINEKKIISKLNFEFLNLKVINEYSKKNSNKKGSIKFIHNKNISE 275

Query: 243 K-----QPIYSGVFSVAGDFSKLLN----------LELSAKKSRLSGNFKISDGNVRISR 287
                 + +++  +      S               E+S   ++++ N  ++  ++ +  
Sbjct: 276 GKYEIEKNLFNFNYLDKSLDSNFKYEGMINFIPFFSEISGDVNKINLNQVLNSDSILVQL 335

Query: 288 YKLQSI---LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
           +K + +     N  T    K     ++   L  +    E + D+N T F
Sbjct: 336 FKTELLNNKNLNIDTIIKAKKIAPYNDLINLVLNLKIEEGLVDINNTKF 384


>gi|94264797|ref|ZP_01288574.1| hypothetical protein MldDRAFT_5021 [delta proteobacterium MLMS-1]
 gi|93454736|gb|EAT04994.1| hypothetical protein MldDRAFT_5021 [delta proteobacterium MLMS-1]
          Length = 1253

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 88/311 (28%), Gaps = 27/311 (8%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89
              R+    QA   +G+ + V+  +++   P P +    I  +         ++  L   
Sbjct: 30  DYARQQVASQAEAQLGQPVGVE-SLEVAWYPLPHLLLVGIAAEDHGWS---LQMPRLEFH 85

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149
             +  L  G + +  + +  P L+    +               +      ++ +K GR+
Sbjct: 86  PRWRTLWRGRLEIGQIVLQDPTLSLDPDA-------FAIPEPKSLVLPTTGELLLKNGRL 138

Query: 150 KII----------DQESDQVYFLSDLNLQISARFLNIISPLSID-SIKGSVIAEGTGNFD 198
           +++                 + LS +N ++ A    +   L+   S    +   G    +
Sbjct: 139 EVVGYSGGLLGLDLGLELAPWQLSAINGRLRAESSRLELELTTTPSFGNELRLAGWLTPE 198

Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF---WNEKQPIYSGVFSVAG 255
                   T      ++ +             I +L         +      +G      
Sbjct: 199 GGH-QLSATGRGLEFDQLLRGAAHGRIATLETIANLELTSQGQAVDHFTATINGEMPCLL 257

Query: 256 DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT-KVSQDEENL 314
              +   +      +RL    + +D  +RI   +++      S     +      + E  
Sbjct: 258 LEPEQDRVRFDCGLARLELQRRGADFKLRIHELEIREPELALSGLVSRRLPPAEDNAEPH 317

Query: 315 LNFSENGAESM 325
                 G +  
Sbjct: 318 WEIELAGRDLD 328


>gi|300979742|ref|ZP_07174692.1| hypothetical protein HMPREF9553_01450 [Escherichia coli MS 200-1]
 gi|300307960|gb|EFJ62480.1| hypothetical protein HMPREF9553_01450 [Escherichia coli MS 200-1]
 gi|324015840|gb|EGB85059.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 60-1]
          Length = 1263

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G  N     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|83858485|ref|ZP_00952007.1| hypothetical protein OA2633_03261 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853308|gb|EAP91160.1| hypothetical protein OA2633_03261 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 1151

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/334 (12%), Positives = 81/334 (24%), Gaps = 32/334 (9%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILP---FPSVFFKDIRIDQKEDGSFESKI 83
           ++    R          V    A  G +++   P      V  +D+ I  + DG      
Sbjct: 39  VNAEMIRPAVTEILLEAVKGDAAAIGDLELSFDPAYAALVVTARDVSIS-RADGDTIIAS 97

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN-------------------W 124
           E +        LL+G +    +      L  Y    G                       
Sbjct: 98  ERIEAGVALDLLLAGRVAPVSLEARGGTLWLYRDELGRLTGGLGALEDRFGAAQESEDAA 157

Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD----LNLQISARFLNIISPL 180
                         L ++ V    +++ D+  D     +     L L   A  L     L
Sbjct: 158 PDFNMDRASRVFARLLRVDVSNVSLQVRDEYHDWTGLFTGMGGALELSDGALSLRAEGAL 217

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI---QLFPLAYPIIIDLFGN 237
              +    +  +       +               A  L+     L  L  P  + L  +
Sbjct: 218 VTSAGLAPITLDVQSGRSLESVFVDAALTDLVPAAAAPLQGPFTGLSALDAPFDMHLVFD 277

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297
                     S          +    +   + +R+  +  +  G + +    + S L   
Sbjct: 278 ASREAGLRQASLQMEADTGVIRSAGRQTDIRAARIDASLDVEAGRLDLHELSVDSDLLTL 337

Query: 298 STDEDN-KTKVSQDEENLLNF-SENGAESMHDLN 329
           S +          D          N  +   DL+
Sbjct: 338 SLNGALHDFTAYDDAIPARALYELNAGQGRLDLS 371


>gi|296134610|ref|YP_003641852.1| hypothetical protein Tint_0109 [Thiomonas intermedia K12]
 gi|295794732|gb|ADG29522.1| conserved hypothetical protein [Thiomonas intermedia K12]
          Length = 1461

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/289 (11%), Positives = 73/289 (25%), Gaps = 27/289 (9%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWT--DFREDFERQATLIVGKKIAVKGGIKIHI-LPF 61
           VL+ L   F +   G  T+   +      FR   E+ ++  +G  + + G I+       
Sbjct: 19  VLLVLTVYFVLG-AGLLTLRYAVLPNAQQFRPWVEQVSSQALGLPVHI-GAIQTQWHGLM 76

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P     D+RID  +      +   +     +  L         + I    L         
Sbjct: 77  PQFALHDVRIDGPQG-QPALQFAAVEATPSWKSLTRLTPTFDQLVIRGADLTVTRPDANH 135

Query: 122 SNW-----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD----QVYFLSDLN 166
                             +          ++I +   R+   +         +  ++ L 
Sbjct: 136 LAIGGIRIALNSSGQSDAAQQFADWLFEQDEILILDSRLTWENAAQHAPPLPLTQVNLLL 195

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL---KIQL 223
                     ++        G +    +     +    + TA+F      +      + L
Sbjct: 196 RNTLLTHRAALTATPPAGFGGPIDLRASFR---QPFFLRHTADFSRWKGTLYGEVPDVDL 252

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
             L   + + L                       +   +L L     +L
Sbjct: 253 AALQPQLPLTLPATTQTGRGSVRAWAQIDDGAPTAFTADLALRGIALQL 301


>gi|213620471|ref|ZP_03373297.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 73

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 28/71 (39%)

Query: 39  QATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG 98
           Q       ++ + G ++ H+ P  S+    + +  +       + + + +     PLLS 
Sbjct: 1   QVAARSEYQLQLDGPLRWHVWPQLSILSGRMTLTARGASEPLVRADNMRLDVALWPLLSH 60

Query: 99  EIRVFDMYIDQ 109
           ++ V  + +  
Sbjct: 61  QLHVKQVMLKG 71


>gi|120555634|ref|YP_959985.1| membrane protein-like [Marinobacter aquaeolei VT8]
 gi|120325483|gb|ABM19798.1| membrane protein-like protein [Marinobacter aquaeolei VT8]
          Length = 1236

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 86/308 (27%), Gaps = 21/308 (6%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFF 66
            L  L    L       L  D   F ++     +   G  ++V G +        PS+  
Sbjct: 34  ILTLLVLFALYVGVGRQLTSDINSFSDELAASLSEATGLDVSV-GSLSSQWYWLDPSITA 92

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
           KDI I+  +     +++E L +R +F   L    +   +   D   L     +       
Sbjct: 93  KDITINSPDSDRIAAELEHLELRLDFFASLFRFRLVFRNFDADGLALTVVRPTDDPFINP 152

Query: 126 -------QRKSTMDMIHNVILEKIHVKGGRIKIID--------QESDQVYFLSDLNLQIS 170
                        ++   + L    +    +++          +++ +   +  L+L   
Sbjct: 153 VEEIVELAEPGAPELQEWIRLAGRWLSDPEVRVTRVSLALGPSRQNLRFLDIPQLDLYYQ 212

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                             + +         R  F         +  +   +        I
Sbjct: 213 GGLFQAAGRAMQSGTTTQLASFALVGQRFFRGEFTGQLYLDVDSGRLFDGLIDDLNWRGI 272

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRISRY 288
            ++ F +L  +       G         +   L+L   +  L+   + +   G  R    
Sbjct: 273 RVEGF-DLGGSAWLSFEDGELQQVQGQVRTPYLQLGVNRESLAPLEDIQAHFGWRRGEAL 331

Query: 289 KLQSILPN 296
           +LQ +  +
Sbjct: 332 RLQKLRWD 339


>gi|330877205|gb|EGH11354.1| hypothetical protein PSYMP_17091 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 1271

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 91/297 (30%), Gaps = 19/297 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A+  +G  +++ G ++     F
Sbjct: 13  RWGLSLCALILVLAALYVSLGRQLTPLVAEYRVDVETRASSALGIPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P +   D+ + +   G+   +++ + +  +    LL+ ++R+  + +D          +
Sbjct: 72  APVLLAHDVMVGE---GANALRLDRVRVVPDLWASLLARQVRIAHLEVDGLQFTIKQDQE 128

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           G           D   +       +   ++       D    +  L+    A        
Sbjct: 129 GGWAVQGLPVRNDTPFDP---GQLLNQMQMVSHLSLLDSQVTVQPLDA---APLTLTYVN 182

Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235
           LS+ +       +      D +  A  + +       K+        L    +   +   
Sbjct: 183 LSLTTGSYHQRLDARLTLPDGQPFALNVRSRIQASQWKDGEADAYASLPQSDWAKWLPKS 242

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
               W   +    G   ++     + +        ++ G +        I    L +
Sbjct: 243 LTREWTLSRLQAGGDLWMSWGKGTVQSATARLNAPQIKGVY-ADRKPSTIDNLALNA 298


>gi|307625162|gb|ADN69466.1| hypothetical protein UM146_00185 [Escherichia coli UM146]
 gi|315289059|gb|EFU48457.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           110-3]
 gi|323957614|gb|EGB53328.1| adhesin HecA family protein [Escherichia coli H263]
          Length = 1263

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G  N     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|331684886|ref|ZP_08385478.1| conserved hypothetical protein [Escherichia coli H299]
 gi|331078501|gb|EGI49707.1| conserved hypothetical protein [Escherichia coli H299]
          Length = 1263

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G  N     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|154148646|ref|YP_001406906.1| hypothetical protein CHAB381_1357 [Campylobacter hominis ATCC
           BAA-381]
 gi|153804655|gb|ABS51662.1| conserved hypothetical protein [Campylobacter hominis ATCC BAA-381]
          Length = 1025

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 51/395 (12%), Positives = 119/395 (30%), Gaps = 43/395 (10%)

Query: 2   LRRVLIGLGF---LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58
           ++++L        L  ++    F +     +        +     +  K+++        
Sbjct: 1   MKKILKFFADKKRLCVLIFAVFFLIYTIFGFFGIPYIITKILPSKMPNKVSLNIQ-NAKF 59

Query: 59  LPFPS-VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
            PF   +   ++ +          K + +    +F       +    + ++ P ++    
Sbjct: 60  NPFTYELNITNLDLRT---QIPLFKAKKIDADIKFTDFFKKNLNFEILTLESPQISIAKD 116

Query: 118 SKGVSNWFQR---------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF--LSDLN 166
             G  N+                +   N+IL+ + +K G IK  D    + +   + ++N
Sbjct: 117 KNGNFNFASLLENNKTENNNEEKNSGVNLILKYLKIKNGTIKYADNSLKEPFVAAIDNIN 176

Query: 167 LQISARFLNIISPLS-----IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN------- 214
            +++   L      +       SI  +V  E   + +  +   KI       N       
Sbjct: 177 YELTDFDLKQNIGGNHRFGGDSSIMENVNIESKVDLNPFKIYGKIDIKNLNINPFWLSFV 236

Query: 215 -KAISLKIQLFPLAYPIIIDLFGNLFW---NEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270
               +LK  +        +     + +   +    I     S+  + S+  N +  A K+
Sbjct: 237 PDNTNLKNGIINSNLLYFLKFDNEIKFYLKDSNLSISDFSLSLDKNSSEHANFKELALKN 296

Query: 271 -------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
                                +    L +   N +    N   V  + EN  NF+    +
Sbjct: 297 FNIHLLYDKDIKTDAKLEKFYLQDANLSAFNYNLNFKNLNSDNVKFNMENQ-NFNVKIPQ 355

Query: 324 SMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK 358
            +    + DF +++       DLK  +I    N  
Sbjct: 356 ILAQTTKLDFKKKDFFALSKIDLKDINISKENNTT 390


>gi|330963996|gb|EGH64256.1| hypothetical protein PSYAC_05010 [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 1271

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 92/297 (30%), Gaps = 19/297 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           R  + L  L  V+     ++   +     ++R D E +A+  +G  +++ G ++     F
Sbjct: 13  RWGLSLCALILVLAALYVSLGRQLTPLVAEYRVDVETRASSALGIPLSI-GSLEGSWSRF 71

Query: 62  -PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P +   D+ + +   GS   +++ + +  +    LL+ ++R+  + +D          +
Sbjct: 72  APVLLAHDVMVGE---GSSALRLDRVRVVPDLWASLLARQVRIAHLEVDGLQFTIKQDQE 128

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           G           D   +    +  +   ++       D    +  L+    A        
Sbjct: 129 GGWAVQGLPVRNDTPFDP---RQVLNQMQMVSHLSLLDSQVTVQPLDA---APLTLTYVN 182

Query: 180 LSIDSIKGSVIAEGTGNF-DNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLF 235
           LS+ +       +      D +  A  + +       K+        L    +   +   
Sbjct: 183 LSLTTGSYHQRLDARLTLPDGQPFALNVRSRIQASQWKDGEADAYASLPQSDWAKWLPKS 242

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
               W   +    G   ++     + +        ++ G +        I    L +
Sbjct: 243 LTREWTLSRLQAGGDLWMSWGKGTVQSATARLNAPQIKGVY-ADRKPSTIDNLALNA 298


>gi|330879573|gb|EGH13722.1| hypothetical protein PSYMP_25345 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 356

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/341 (9%), Positives = 98/341 (28%), Gaps = 31/341 (9%)

Query: 2   LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++R     L  L  L  +++     +P  +     R+    +   +   +  V   + + 
Sbjct: 1   MKRRYSWPLWTLAALVVLLIAINIALPYVV-----RDYLNDKLADMGEYRGEVT-DVDLA 54

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +    +   K ++I + +            + +   +  L      V       P +NF 
Sbjct: 55  LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTNPQINFV 113

Query: 116 LSSKGVSNWFQRKSTMDMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
               G +N    ++               + L ++ +  GRI   +  S     +    +
Sbjct: 114 ---DGGNNKQASQTGQGTDWRTQMNKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQV 170

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPL 226
             S   L  +  +  +        +G                +  +  +    +++   +
Sbjct: 171 NASFYNLTNVVDVEGNRDA---EFKGKACLLGHADLESTARFDPFSNFEDFDFRLRATGI 227

Query: 227 AYPIIIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
               + D       ++        V     +  +L        ++    N++    N   
Sbjct: 228 QLKKLNDFSSAYAKFDFNAGDGDLVIEAQANKGQLSGYIKPLLRNVDVFNWQQDVQNKDK 287

Query: 286 SRYK--LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
             ++   ++++  S T   N+ +        L+ S +  + 
Sbjct: 288 GVFRSIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 328


>gi|28871055|ref|NP_793674.1| hypothetical protein PSPTO_3903 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28854305|gb|AAO57369.1| conserved protein of unknown function [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 356

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/341 (9%), Positives = 98/341 (28%), Gaps = 31/341 (9%)

Query: 2   LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++R     L  L  L  +++     +P  +     R+    +   +   +  V   + + 
Sbjct: 1   MKRRYSWPLWTLAALVVLLIAINIALPYVV-----RDYLNDKLADMGEYRGEVT-DVDLA 54

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           +    +   K ++I + +            + +   +  L      V       P +NF 
Sbjct: 55  LWRG-AYRIKGLKIVKTDGKVPVPFFDAPMIELAVSWHSLWYDHAVVAKALFTNPQINFV 113

Query: 116 LSSKGVSNWFQRKSTMDMIH--------NVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
               G +N    ++               + L ++ +  GRI   +  S     +    +
Sbjct: 114 ---DGGNNKQASQTGQGTDWRTQMNKLLPITLNELRIDNGRITFNNFNSTPKVKIEADQV 170

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPL 226
             S   L  +  +  +        +G                +  +  +    +++   +
Sbjct: 171 NASFYNLTNVVNVEGNRDA---EFKGKARLLGHADLESTARFDPFSNFEDFDFRLRATGI 227

Query: 227 AYPIIIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
               + D       ++        V     +  +L        ++    N++    N   
Sbjct: 228 QLKKLNDFSSAYAKFDFNAGDGDVVIEAQANKGQLSGYIKPLLRNVDVFNWQQDVQNKDK 287

Query: 286 SRYK--LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
             ++   ++++  S T   N+ +        L+ S +  + 
Sbjct: 288 GVFRSIWEALVGTSETVLKNQRENQFATRVDLSGSVHQQDI 328


>gi|217973830|ref|YP_002358581.1| hypothetical protein Sbal223_2668 [Shewanella baltica OS223]
 gi|217498965|gb|ACK47158.1| protein of unknown function DUF748 [Shewanella baltica OS223]
          Length = 1151

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 46/380 (12%), Positives = 111/380 (29%), Gaps = 53/380 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR +        S V      +P  I           + + ++G+ + + G I+I+    
Sbjct: 19  LRVLAYLTAVYLSYVCTLGLILPYAITT-----LAPEKLSALLGRPVTL-GDIRINPF-N 71

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL-SSK 119
             V    + I +K+     + +  +     F   + +    + +++I  P+ +      K
Sbjct: 72  FKVAIDQLAIKEKD-EKPFAGLAQVQFEVNFWQSVFNRAAVIENIHIQAPYAHIIRVQKK 130

Query: 120 GVSNW-----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
           G + +                     +       V+L +  +  G+    D+ +      
Sbjct: 131 GKAGFNFDDILQTLNEHSSASTETTPAETSAPVRVLLSQFVLDAGQFNFDDKITHAQVNY 190

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
            ++NL++S       +   + ++  SV      N           +     + +  + IQ
Sbjct: 191 PNINLKLSQLD----TEYLMSALSASVAPATKANKTEANPTPNAQSASDTGSGSQVMPIQ 246

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                  +  D  G +          G F +          ++   K +L+  ++  D  
Sbjct: 247 HNHYVIQLSDDHAGEIS-------SQGQFQLFPLKIAG---DVHIAKLKLTPLWRFIDDQ 296

Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE-----SMHDLNETDFFEEE 337
                   +  L +       + +V   E   L  + N  +        +  E    +  
Sbjct: 297 -------FKPALTDGQITAKTQYQVDLAENGELQVTSNNGQFIVEKLNFNDQERSVVKLP 349

Query: 338 EKKNKNDDLKKDDIQYSVNK 357
                   +     Q  +NK
Sbjct: 350 IFALDGISMDLKQQQVHINK 369


>gi|294637785|ref|ZP_06716059.1| paral putative protease [Edwardsiella tarda ATCC 23685]
 gi|291089077|gb|EFE21638.1| paral putative protease [Edwardsiella tarda ATCC 23685]
          Length = 1264

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/334 (10%), Positives = 95/334 (28%), Gaps = 37/334 (11%)

Query: 2   LRRV----LIGLGFLFSVVLVGAFTVPLFID-WTDFREDFERQATLIVGKKIAVKGGIKI 56
           +RR+    L+ L  L  +V +    + L +      R     Q + + G    + G ++ 
Sbjct: 1   MRRLPGYLLVTLATLIVLVALLVSGLRLLLPHLDRVRPQIAEQLSELTGTSATI-GTLQA 59

Query: 57  HILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNF 114
               F P++  +D+ +          K+  +++  +    L    ++  D+   Q     
Sbjct: 60  SWQSFGPTLEVRDLAMSGGAGQ---LKVRRVTLALDVWQSLLHARLQFRDLTFYQLQAAT 116

Query: 115 YL-SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISAR 172
               ++       +   +  I     +   ++  R+        Q    +  L    S  
Sbjct: 117 DRPLAREQGGGGLQGDELSDIFLRQFDHFTLRDSRLSFPSPSGTQLQLTIPQLTWLNSPD 176

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS---LKIQLFPLAYP 229
                  +S  +               +    ++  +   KN  +S   L +Q   +   
Sbjct: 177 RHRAEGEVSFTTP------------QGQHGTLQVRMDLRDKNGLLSDGELYLQAQQIDLT 224

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
             +  + N         +S    +     ++   ++  +  +           + +    
Sbjct: 225 PWLSRWVNRNTGVSGADFSLDAWLTIHKGEMQAAQIRLRDGQADWQASGQRHRLTVDDLT 284

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
           L++         D            LN + +G  
Sbjct: 285 LRAARYQDGWRLD---------VPRLNLATDGQS 309


>gi|281602623|gb|ADA75607.1| putative membrane protein [Shigella flexneri 2002017]
 gi|313648512|gb|EFS12954.1| uncharacterized protein yhdP [Shigella flexneri 2a str. 2457T]
          Length = 1266

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---NAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G S+     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|257061204|ref|YP_003139092.1| hypothetical protein Cyan8802_3430 [Cyanothece sp. PCC 8802]
 gi|256591370|gb|ACV02257.1| protein of unknown function DUF490 [Cyanothece sp. PCC 8802]
          Length = 1975

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/381 (10%), Positives = 105/381 (27%), Gaps = 17/381 (4%)

Query: 1   MLRRVL----IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +LRR+     I +G     V++  +T              E Q + I+ + I +      
Sbjct: 18  LLRRLTHPATIAIGVGSVTVVLIGYTGLRLFLKEYLPPWLETQVSYIINRPIKIGELQDF 77

Query: 57  HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
            +     +      I    D   +  I  ++++   L ++        +   +  ++ + 
Sbjct: 78  SL---TGLSLGSTSIPVTPDNPNQITISKINVKFNPLAVVFRRTLPITISPQKVDVDVFQ 134

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
           +++G       + +   +   +  K+      +    ++             +       
Sbjct: 135 NAQGQLLTIDVEESKLPVKLDLTFKVEKADINVFPYQKKQPLEVQFKGEARYLEEDVAKW 194

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
              L++  +   V  +G        S  K+       +   S  I          +    
Sbjct: 195 QYDLNLALLNSQVKLQGETICSTTESNIKLNVEKLDFSSLTSFIIDFPLRLNSGNVQANL 254

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS--GNFKISDGNVRISRYKLQSIL 294
           N+        + G  +        L  ++           N    +  V +   +L    
Sbjct: 255 NIQSP-SLKEFQGTQAQGNVNLSNLQGQVKPLTKPFEVLSNISFKNNKVLVKNAQLTIGQ 313

Query: 295 PNSSTDEDNKTKVSQDEENLLNFS-ENGAESMHDLNETDFFEEEEKKNKNDDLK----KD 349
             +      +   +      +N     G      L  +   + E + + N  L     K 
Sbjct: 314 ITAK--LGGEYDWNTGSNLAVNLEGLTGRNLRQVLPPSFSLQVEGELDANFKLTGQLNKP 371

Query: 350 DIQYSVNKKEEKDNSHDKENQ 370
            ++  +N K+       K +Q
Sbjct: 372 LLKGKINNKKALTVLKTKFDQ 392


>gi|220916977|ref|YP_002492281.1| hypothetical protein A2cp1_1873 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219954831|gb|ACL65215.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 385

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 93/307 (30%), Gaps = 25/307 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR+ + LG L  + +     +     W   +         + G +      ++I +L   
Sbjct: 7   RRLAVALGILLVLGIAARLALGPIATWRTRK-----VLAGLEGMRGTFS-DVEIRLL-SL 59

Query: 63  SVFFKDIRI---DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           S    D+RI             + E + +      LL G +    + + +P LN  +   
Sbjct: 60  SYVIHDLRIVKVGAGGAALPYLEAERVELGLYGKELLHGNVVAG-VELRRPKLNLLVGKA 118

Query: 120 GVSNWFQRKSTM-----DMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQISAR 172
                  ++++      + +    +++  VK G +  +D    +   L    +   +   
Sbjct: 119 RERTQAAKEASEAGRGLERLAPFRIDRAEVKDGELLWVDGREKEKPRLWFHGIEATLENF 178

Query: 173 FLNIIS---PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
                      ++ + + ++   GT +             F  +     L++        
Sbjct: 179 ATRAALARREPTVLAARATLQRSGTVSVFATADPLAKQLTFAGQGTVTGLRLAELGELLD 238

Query: 230 IIIDL---FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
              DL    G L    +     G  S  G    + + EL A  S L    K    +  + 
Sbjct: 239 AKTDLVPEKGTLDLYVRFRAEDGRLS-GGVRPLVKDAELKAGASDLGTRLKAMLADASLH 297

Query: 287 RYKLQSI 293
            +  +  
Sbjct: 298 LFSDERG 304


>gi|197122201|ref|YP_002134152.1| hypothetical protein AnaeK_1794 [Anaeromyxobacter sp. K]
 gi|196172050|gb|ACG73023.1| conserved hypothetical protein [Anaeromyxobacter sp. K]
          Length = 385

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 91/306 (29%), Gaps = 23/306 (7%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR+ + LG L  + +     +     W   +         + G +      ++I +L   
Sbjct: 7   RRLAVALGILLVLGIAVRLALDPIATWRTRK-----VLAGLEGMRGTFS-DVEIRLLSLS 60

Query: 63  SVF--FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            V    + +++          + E + +      LL G +    + + +P LN  +    
Sbjct: 61  YVIHHLRIVKVGAGGAALPYLEAERVELGLYGKELLHGNVVAG-VELRRPKLNLLVGKAR 119

Query: 121 VSNWFQRKSTM-----DMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQISARF 173
                 +++       + +    +++  VK G +  +D    +   L    +   +    
Sbjct: 120 ERTQAAKEAPEAGRGLERLAPFRIDRAEVKDGELLWVDGREKEKPRLWFHGIEATLENFA 179

Query: 174 LNIIS---PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                     ++ + + ++   GT +             F  +     L++         
Sbjct: 180 TRAALARREPTVLAARATLQRSGTVSVFATADPLAKQLTFAGQGTVTGLRLAELGELLDA 239

Query: 231 IIDL---FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
             DL    G L    +     G  S  G    + + EL A    L    K    +  +  
Sbjct: 240 KTDLVPEKGTLDLYVRFRAEDGRLS-GGVRPLVKDAELKAGAPDLGTRLKAMLADASLHL 298

Query: 288 YKLQSI 293
           +  +  
Sbjct: 299 FSDERG 304


>gi|15803779|ref|NP_289813.1| hypothetical protein Z4604 [Escherichia coli O157:H7 EDL933]
 gi|15833372|ref|NP_312145.1| hypothetical protein ECs4118 [Escherichia coli O157:H7 str. Sakai]
 gi|187776432|ref|ZP_02802647.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188025261|ref|ZP_02777164.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|189010328|ref|ZP_02806396.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189401895|ref|ZP_02779234.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189403231|ref|ZP_02794108.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189404348|ref|ZP_02788789.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|189404779|ref|ZP_02811138.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC869]
 gi|189406041|ref|ZP_02825964.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC508]
 gi|208809716|ref|ZP_03252053.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7
           str. EC4206]
 gi|208813185|ref|ZP_03254514.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7
           str. EC4045]
 gi|208821581|ref|ZP_03261901.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7
           str. EC4042]
 gi|209398580|ref|YP_002272708.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7
           str. EC4115]
 gi|217327279|ref|ZP_03443362.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7
           str. TW14588]
 gi|254795188|ref|YP_003080025.1| hypothetical protein ECSP_4214 [Escherichia coli O157:H7 str.
           TW14359]
 gi|291284613|ref|YP_003501431.1| hypothetical protein G2583_3965 [Escherichia coli O55:H7 str.
           CB9615]
 gi|12517869|gb|AAG58373.1|AE005552_3 hypothetical protein Z4604 [Escherichia coli O157:H7 str. EDL933]
 gi|13363591|dbj|BAB37541.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|187767168|gb|EDU31012.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188013932|gb|EDU52054.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|189001012|gb|EDU69998.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189358421|gb|EDU76840.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189361834|gb|EDU80253.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189366129|gb|EDU84545.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374037|gb|EDU92453.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC869]
 gi|189376836|gb|EDU95252.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC508]
 gi|208729517|gb|EDZ79118.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7
           str. EC4206]
 gi|208734462|gb|EDZ83149.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7
           str. EC4045]
 gi|208741704|gb|EDZ89386.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7
           str. EC4042]
 gi|209159980|gb|ACI37413.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7
           str. EC4115]
 gi|209757678|gb|ACI77151.1| hypothetical protein ECs4118 [Escherichia coli]
 gi|209757680|gb|ACI77152.1| hypothetical protein ECs4118 [Escherichia coli]
 gi|209757682|gb|ACI77153.1| hypothetical protein ECs4118 [Escherichia coli]
 gi|209757684|gb|ACI77154.1| hypothetical protein ECs4118 [Escherichia coli]
 gi|209757686|gb|ACI77155.1| hypothetical protein ECs4118 [Escherichia coli]
 gi|217319646|gb|EEC28071.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7
           str. TW14588]
 gi|254594588|gb|ACT73949.1| conserved membrane protein, predicted transporter [Escherichia coli
           O157:H7 str. TW14359]
 gi|290764486|gb|ADD58447.1| hypothetical protein G2583_3965 [Escherichia coli O55:H7 str.
           CB9615]
 gi|326337940|gb|EGD61774.1| hypothetical protein ECF_05566 [Escherichia coli O157:H7 str. 1125]
 gi|326347509|gb|EGD71234.1| conserved hypothetical protein TIGR02099 [Escherichia coli O157:H7
           str. 1044]
          Length = 1266

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G S+     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|198276148|ref|ZP_03208679.1| hypothetical protein BACPLE_02337 [Bacteroides plebeius DSM 17135]
 gi|198270960|gb|EDY95230.1| hypothetical protein BACPLE_02337 [Bacteroides plebeius DSM 17135]
          Length = 1544

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/372 (10%), Positives = 111/372 (29%), Gaps = 32/372 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQA----TLIVGKKIAVKGGIKIH 57
           +++ +   G + +   +    + + I     +     +A    +   G  I ++   +I 
Sbjct: 6   MKKYIKWGGIVLASPFILFIVLCILIYIPAVQNFIVDKATFYASQATGMNIHIQ---RIS 62

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
           +    ++   +  +   +D      +E L+++ + LPL+  +I +  + +    +N    
Sbjct: 63  LSFPLNLVVHETTVTNPQD--TLLNVEKLTVKIQLLPLVKKQIEIDGVELKNASVNTVDL 120

Query: 118 SKGV-------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
            +G+         + +           IL ++ +K   +K+   ++              
Sbjct: 121 IEGMSLQGNLGELFLKSHGVDLTPETAILNELTLKDANLKLCLADTTAQDTTQSTPTFWK 180

Query: 171 ARFLNI---ISPLSIDSIKGSVIAE---GTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
            +   I        +D    S+      G  +  +        A    + K +   +   
Sbjct: 181 FKLEKIDLANVDFQMDMPLDSMNLGLTVGNASLRDGLVDLHKAAYSAKEFKLLQSGLYYN 240

Query: 225 -PLAYPIIIDLFGN------LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
                PI   L  +      +        Y G    A      L      +     G  +
Sbjct: 241 SGNTPPIEKGLDPSHIAVTDINLQMDSLYYQGNNIRALLHQFELKERSGLEIKSTEGQLQ 300

Query: 278 ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL---NFSENGAESMHDLNETDFF 334
             +  +R+   ++++     +        V++  ++ +    F     ++       D  
Sbjct: 301 ADEKAIRVPSLQIKTANSFLALKATIDWSVTEQNQDGVLNGQFMAEIGKADLFKLIPDMP 360

Query: 335 EEEEKKNKNDDL 346
           +E  +      L
Sbjct: 361 QEFIQSFPAAPL 372


>gi|157162723|ref|YP_001460041.1| hypothetical protein EcHS_A3435 [Escherichia coli HS]
 gi|157068403|gb|ABV07658.1| conserved hypothetical protein TIGR02099 [Escherichia coli HS]
          Length = 1266

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/333 (11%), Positives = 91/333 (27%), Gaps = 26/333 (7%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G S+     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315
            + S      I  +          ++   E   
Sbjct: 295 WQFSIPD-TRITMDGKPWPSGALTLAWIPEQDF 326


>gi|193065331|ref|ZP_03046402.1| conserved hypothetical protein [Escherichia coli E22]
 gi|194429136|ref|ZP_03061666.1| conserved hypothetical protein [Escherichia coli B171]
 gi|260846052|ref|YP_003223830.1| hypothetical protein ECO103_3986 [Escherichia coli O103:H2 str.
           12009]
 gi|192926972|gb|EDV81595.1| conserved hypothetical protein [Escherichia coli E22]
 gi|194412861|gb|EDX29153.1| conserved hypothetical protein [Escherichia coli B171]
 gi|257761199|dbj|BAI32696.1| conserved predicted membrane protein [Escherichia coli O103:H2 str.
           12009]
          Length = 1266

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G S+     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|114047978|ref|YP_738528.1| hypothetical protein Shewmr7_2486 [Shewanella sp. MR-7]
 gi|113889420|gb|ABI43471.1| protein of unknown function DUF748 [Shewanella sp. MR-7]
          Length = 1067

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/351 (9%), Positives = 110/351 (31%), Gaps = 33/351 (9%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP-SVFFK 67
           +    ++  +    +   +           + T ++G+ + ++    + I PF   V  +
Sbjct: 21  ILAYLAITYLSYLIILGLVLPKAVVSFAPEKLTEVLGRPVTLQ---DLRINPFTYRVNIE 77

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG------ 120
            + + + ++    + +  L     F   + +  + +  + +  P                
Sbjct: 78  QLEVKESDN-QAFAGLSQLQFEVNFWQSVFNQALVIDHIQLQGPFAKVSRFQSKGATQFN 136

Query: 121 ------VSNWFQRKSTMD------MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
                   N  +  S  +          VIL +  +  G++K  D  +  +    ++N +
Sbjct: 137 FDDILTRLNQAKTPSEPETTTENTRPLRVILGEFSLTAGKVKFEDNVTHALVDYPNINFK 196

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
           +S      +      S       +            +        +   +  +     A+
Sbjct: 197 LSQLDTEYLMTSKPASPANGQPTQSQDKPATAAPTTQANTASNPPSILHNQFVAQLQDAH 256

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFS------KLLNLELSAKKSRLSGNFKIS--- 279
              + L G       + +     +            +   ++L+A +  ++ ++++    
Sbjct: 257 AGEVSLAGQFQLFPFKLVGDVQLAKLQLAPFWPFVAEQFKVKLAAGELSINSHYQVELPA 316

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330
            GN++++  + Q I+        +++ ++     +   + N A+   D+ +
Sbjct: 317 GGNLQLTADRGQVIVEKVDLLNGDQSIIALPLLAIDGINLNLAKQRIDIKQ 367


>gi|190571054|ref|YP_001975412.1| hypothetical protein WPa_0647 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019575|ref|ZP_03335381.1| putative exported protein [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190357326|emb|CAQ54755.1| Putative exported protein [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212994997|gb|EEB55639.1| putative exported protein [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 829

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/357 (12%), Positives = 103/357 (28%), Gaps = 37/357 (10%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--- 78
               F DW+ +RE   ++       K+ V G I++ ++  P +   ++ +   ++     
Sbjct: 20  VAATFKDWSGYREYIVKELEKTYDAKVHVGGKIEVSLI-TPKLTIHNVYVQYNKNKEQKL 78

Query: 79  -FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV 137
                 + + +R       S  ++   +                SN     + ++   N 
Sbjct: 79  SDLISAKKIEIRPSL---FSFSLQPKSISFLGM----------KSNKENLLNIINTKAND 125

Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197
            +  I +K  +I               +N++  A   N      +     +    G  N 
Sbjct: 126 NIVDILIKDSQISF---------NADTINIKEVAIKKNKQFFGEVQIGDNNYDFSGKVNV 176

Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257
                   + +NF          +          +     L  N      SG+  +    
Sbjct: 177 TKNNVHISVDSNFA--------NLLFKGNRNQEELKGNLVLTINNNSDSMSGLAKI--IN 226

Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317
              L+  + ++   +S N  +++     +  K++S     +    N  K      N+   
Sbjct: 227 LSFLSYVIPSENIEISSNINLNESEFTATDLKIESKSMQGTGIIQNDRKSDHTNINISFS 286

Query: 318 SENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374
             +     H   +     E  ++    +L  D    + N + +            F+
Sbjct: 287 KVDLKNGSHKTTDMKGLLESFREVVPKNLSLDFNMEASNIQYQNRILDKFHATLKFA 343


>gi|94265824|ref|ZP_01289556.1| hypothetical protein MldDRAFT_5086 [delta proteobacterium MLMS-1]
 gi|93453631|gb|EAT04021.1| hypothetical protein MldDRAFT_5086 [delta proteobacterium MLMS-1]
          Length = 1253

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 87/311 (27%), Gaps = 27/311 (8%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89
              R+    QA   +G+ + V+  +++   P P +    I  +         ++  L   
Sbjct: 30  DYARQQVASQAEAQLGQPVGVE-SLEVAWYPLPHLLLVGIAAEDHGWS---LQMPRLEFH 85

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149
             +  L  G + +  + +  P L+    +               +      ++ +K GR+
Sbjct: 86  PRWRTLWRGRLEIGQIVLQDPTLSLDPDA-------FAIPEPKSLVLPTTGELLLKNGRL 138

Query: 150 KI----------IDQESDQVYFLSDLNLQISARFLNIISPLSID-SIKGSVIAEGTGNFD 198
           ++                  + LS +N ++ A    +   L+   S    +   G    +
Sbjct: 139 EVAGYSGGLLGLDLGLELAPWQLSAINGRLRAETSRLELELTTTPSFGNELRLAGWLTPE 198

Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF---WNEKQPIYSGVFSVAG 255
                   T      ++ +             I +L         +      +G      
Sbjct: 199 GGH-QLSATGRGLEFDQLLRGAAHGRIATLETIANLELTSQGQAVDHFTATINGEMPCLL 257

Query: 256 DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT-KVSQDEENL 314
              +   +      +RL    + +D  +RI   +++      S     +      + E  
Sbjct: 258 LEPEQDRVRFDCGLARLELQRRGADFKLRIHELEIREPELALSGLVSRRLPPAEDNAEPH 317

Query: 315 LNFSENGAESM 325
                 G +  
Sbjct: 318 WEIELAGRDLD 328


>gi|325110512|ref|YP_004271580.1| hypothetical protein Plabr_3981 [Planctomyces brasiliensis DSM
           5305]
 gi|324970780|gb|ADY61558.1| hypothetical protein Plabr_3981 [Planctomyces brasiliensis DSM
           5305]
          Length = 1162

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/327 (12%), Positives = 102/327 (31%), Gaps = 15/327 (4%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLI-VGKKIAVKGGIKIHILPFPSV 64
           L+ +    ++V+  A                 ++         I+        +     V
Sbjct: 39  LLIVAGGIALVVAVAVLWGWSQRDEFLTSMIRKELAEKHADWNISFA---NAELDHRGRV 95

Query: 65  FFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKGVSN 123
              ++ ++   D      ++GL +  +   LL  G++ V  + +++P L    +  G  N
Sbjct: 96  VLANVTVNPHGDAEPLCAMQGLRVTVDRELLLDHGKVDVKAVEVNRPKLTLIRTFDGQWN 155

Query: 124 WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS----DLNLQISARFLNIISP 179
           W     T D    V L KI      +     E ++   L     D++L  +++       
Sbjct: 156 WQNLPLTGDNDKPVPLIKIRDACVAVVWEHAEFERALRLQVDAVDVDLTPTSQHGYTFKG 215

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
           +  +   G     GT +  +K           + ++       +       +I   G   
Sbjct: 216 VGREETLGQSQFSGTFDARHKTWELTGHLKGLSIDQPFLQAAAMLSPDAERVISRLGESQ 275

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
           + + QP   G    + + +         K+  +  N   S   V  + + L+ +   ++ 
Sbjct: 276 FRKDQPEVPGS---SPNSNANEIRTAQLKEPAVLANTAASRITVGDNAFSLKLL---ANL 329

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMH 326
                 ++  + +  +       +  H
Sbjct: 330 QFHCSRQLDAEADFSVFADLVSGQLEH 356


>gi|303230973|ref|ZP_07317716.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302514355|gb|EFL56354.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
          Length = 1429

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/341 (12%), Positives = 108/341 (31%), Gaps = 29/341 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKI--AVKGGIKIHILP 60
           ++  +    +  + + G       I+    R          +   +   ++    +HI  
Sbjct: 4   KKWCLIGAAVLGLGVAGIAAS---INPIAER-YVAPMVQEQLHNTVRGTIQYD-SMHIAW 58

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-------GEIRVFDMYIDQPHLN 113
              V  +++ +  + +    + +  +++  ++  + S       G   V  + +++P ++
Sbjct: 59  NGDVVLQNVSLRDENNHL-VAAVPTMNVSMKYTSVPSILMGNSSGAAIVSTITLEKPDIH 117

Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG---GRIKIIDQESDQVYFLSDLNLQIS 170
            +  + G  N                +   V     G ++  D     V+ LS+L+  I+
Sbjct: 118 VWQLADGSWNVNSLLEPSPKSDKKSFDGNIVVNDATGAVRFKD---GNVHRLSNLDGNIA 174

Query: 171 -ARFLNIISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLKIQLFPLAY 228
                     L+      S+   G+ N +        + A     +  +++      L+ 
Sbjct: 175 LNVDGMTKGALNGLLDDHSIAVNGSINMNKMDDFDLFVRAESVDISGIMNMAPSNKNLSI 234

Query: 229 PIII--DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
              I  D+   +   + +   SG  +  G      N + + +  + +G     +  V IS
Sbjct: 235 TSGILHDVKAQITGRDGKYSMSGNLAFDGVGGTYKNGDTTYQIGQGNGKIFFQNNTVLIS 294

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
                S    +         V+  +E  LN +        +
Sbjct: 295 H----SGWYVNDQAIKVNGLVTLGDEVGLNLNAVADSIALE 331


>gi|323946907|gb|EGB42923.1| adhesin HecA family protein [Escherichia coli H120]
          Length = 1263

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G  N     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|188495453|ref|ZP_03002723.1| conserved hypothetical protein TIGR02099 [Escherichia coli 53638]
 gi|188490652|gb|EDU65755.1| conserved hypothetical protein TIGR02099 [Escherichia coli 53638]
          Length = 1266

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G S+     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGVLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|293412613|ref|ZP_06655336.1| hypothetical protein ECEG_02629 [Escherichia coli B354]
 gi|291469384|gb|EFF11875.1| hypothetical protein ECEG_02629 [Escherichia coli B354]
          Length = 1263

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G  N     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|331664853|ref|ZP_08365758.1| conserved hypothetical protein [Escherichia coli TA143]
 gi|331058101|gb|EGI30083.1| conserved hypothetical protein [Escherichia coli TA143]
          Length = 1263

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G  N     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|300904438|ref|ZP_07122284.1| hypothetical protein HMPREF9536_02516 [Escherichia coli MS 84-1]
 gi|301304291|ref|ZP_07210405.1| hypothetical protein HMPREF9347_02896 [Escherichia coli MS 124-1]
 gi|300403600|gb|EFJ87138.1| hypothetical protein HMPREF9536_02516 [Escherichia coli MS 84-1]
 gi|300840417|gb|EFK68177.1| hypothetical protein HMPREF9347_02896 [Escherichia coli MS 124-1]
 gi|315257170|gb|EFU37138.1| paral putative protease [Escherichia coli MS 85-1]
          Length = 1263

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G  N     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|300898013|ref|ZP_07116385.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           198-1]
 gi|300358263|gb|EFJ74133.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           198-1]
          Length = 1263

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G  N     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|309793822|ref|ZP_07688248.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           145-7]
 gi|308122779|gb|EFO60041.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           145-7]
          Length = 1263

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G  N     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|300817503|ref|ZP_07097719.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           107-1]
 gi|300529801|gb|EFK50863.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           107-1]
          Length = 1263

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G  N     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|223937867|ref|ZP_03629767.1| hypothetical protein Cflav_PD2738 [bacterium Ellin514]
 gi|223893473|gb|EEF59934.1| hypothetical protein Cflav_PD2738 [bacterium Ellin514]
          Length = 227

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 5/133 (3%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +      LF +++V      L +D    +E  E +     G  + + G +++ I   
Sbjct: 1   MKFLFRWAFRLFILLVVLVIAGILLLDT-IAKEVAEYRIRRQTGLDVKI-GRMQVGIF-N 57

Query: 62  PSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             V  +++ I       GS    +  L +  +   LLS ++    +  +   LN      
Sbjct: 58  SRVTIENLVIYNTAEFGGSPLIDLPELHVEYDRDSLLSHKLHCKLVRFNLAQLNLVEDKN 117

Query: 120 GVSNWFQRKSTMD 132
           G  N  Q ++ M 
Sbjct: 118 GNLNVAQLQARMQ 130


>gi|323979044|gb|EGB74122.1| adhesin HecA family protein [Escherichia coli TW10509]
          Length = 1263

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G  N     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|301022182|ref|ZP_07186099.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 69-1]
 gi|300397649|gb|EFJ81187.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 69-1]
          Length = 1263

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G  N     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|256018841|ref|ZP_05432706.1| hypothetical protein ShiD9_07988 [Shigella sp. D9]
 gi|300824397|ref|ZP_07104511.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           119-7]
 gi|300523126|gb|EFK44195.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           119-7]
          Length = 1263

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G  N     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|91762856|ref|ZP_01264821.1| hypothetical protein PU1002_06286 [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91718658|gb|EAS85308.1| hypothetical protein PU1002_06286 [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 483

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/310 (11%), Positives = 99/310 (31%), Gaps = 29/310 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           + ++  +  LF+ +      +PL  D    +     + +      +     I   ILP P
Sbjct: 34  KYIITAISILFAYIF--YLLIPLLYDKNWVQNKIVSKLSSEFNINLTNSFDISYRILPKP 91

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYLSSKGV 121
               +D         +  ++I+ L++        + + IR+ +++I++ + +   +    
Sbjct: 92  HYLIRD-------SKTSLAEIKTLNVLISQNNFFNKDSIRINEVFIEEANFSLLSN---- 140

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESD--QVYFLSDLNLQISARFLNIISP 179
                +    D  +    +KI +    +   +  ++   +  +S+  L    + L  +  
Sbjct: 141 ---DLKPLYKDSENKFSKKKIKINDSNVFFKNNLNEVISIIKISNAFLFFDEKNLFNLFD 197

Query: 180 LSIDSIKGSVIAEGTGNFDNKRS------AFKITANFPAKNKAISLKIQLFPLAYPIIID 233
           L  +              +++++        K+        K   L   +  ++    ++
Sbjct: 198 LKGEIFNIPFELNYQNTINSQKNIKIKASDIKLKIIDKFFKKDEDLNSGMNNISI---LN 254

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
              N  ++ K  I       +   +  +N       +    N KI   N +IS       
Sbjct: 255 SSINTKYSIKDQIVIFQSDGSKTLNSKINYNGQLAINPFDLNLKIDLYNYKISNL-FTPN 313

Query: 294 LPNSSTDEDN 303
              +   +  
Sbjct: 314 SIINEFIKSG 323


>gi|221067237|ref|ZP_03543342.1| AsmA family protein [Comamonas testosteroni KF-1]
 gi|220712260|gb|EED67628.1| AsmA family protein [Comamonas testosteroni KF-1]
          Length = 737

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 51/436 (11%), Positives = 110/436 (25%), Gaps = 86/436 (19%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPS------------VFFKDIRID 72
           F+DW   R     + +   G++ A+ G +++    P P             V   D+ + 
Sbjct: 47  FMDWNKLRPWINEKVSSSTGREFAINGDLQLQWTWPQPLDTGWRHWVPGVVVHASDLTLS 106

Query: 73  QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL---------SSKGVSN 123
           Q +    +   E    +   LP    E+    +       N            +  G   
Sbjct: 107 QPQGWLVQQAPEKADDKQPVLPATPKELNTGRLPGQGQAANEKRTAADDDDAIADAGRQP 166

Query: 124 WFQRKSTMDMIH--------------NVILEKIHVKGGRIKIIDQESDQ----------- 158
             +   TM                  +V L+ + ++   + +   +  +           
Sbjct: 167 PERDARTMITAANATASLRLWPLLARHVQLDSLLLQAPDMVLARNDKGENNWTFDKPTSS 226

Query: 159 ---------VYFLSDLNLQISARFLNIISPLSIDSIKGSV--------IAEGTGNFDNKR 201
                       +SD  L  S    N+     ID+++  V            TG     +
Sbjct: 227 GPKWSLDIGQLRISDGVLGWSDAIKNMAVRARIDTLRRPVSADQPYGMRFGLTGYLHQGK 286

Query: 202 SAFKITAN------FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255
           +  +I A          +   +   +++      +     G L   +          V G
Sbjct: 287 TRAQIQAQGLAGQVLDLRQDRLRFPLRISAKVGSLQAFAEGFLDNPKTLDGLDFQVKVLG 346

Query: 256 DFSKLLNLELSAKKSR---------LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
                L                   L G+ +      +  ++K +    + S D      
Sbjct: 347 KSMADLFELTGLLLPATPPFETSGHLIGSLQPGKAVWQYEKFKGRLGQSDLSGDLQ---Y 403

Query: 307 VSQDEENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDDLK---KDDIQYSVNKKEEKD 362
            S      L       +    DL             K   +       +++     ++ D
Sbjct: 404 RSAQPRPKLTAQLRSKQLRLVDLGPVIGAAPSGSSGKPQPVNGRVLPQVRFQTENWDKMD 463

Query: 363 NSHDKENQENFSGDKM 378
                E+      + +
Sbjct: 464 LDLRYESNHILRPEAL 479


>gi|218708386|ref|YP_002416007.1| hypothetical protein VS_0346 [Vibrio splendidus LGP32]
 gi|218321405|emb|CAV17355.1| Hypothetical protein VS_0346 [Vibrio splendidus LGP32]
          Length = 1290

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/329 (7%), Positives = 90/329 (27%), Gaps = 28/329 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTV-PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           +LR  L  +  L   + +   T+     +   ++ + E       G + +++        
Sbjct: 8   ILRTCLWLVVTLLVTLAIAVTTLRVALPNLNKYQSEIELWVNQHSGFEFSIQDVGGFWRN 67

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG------EIRVFDMYIDQPHLN 113
             PS+  + ++            +E + +  + +  +        ++ +  MY+D   ++
Sbjct: 68  THPSIALQGVKASLPNAEDVAFSVERVEVEFDLIQSVVQMRPVVADLVMNQMYLDIRSID 127

Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVI------LEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
            +    G        S+  +I  +       L  +  K   +      S +   L    L
Sbjct: 128 LFAGQNGKDEPKDPGSSKRVIQELDNLLLKTLVDVTAKDSSLLYRT-ISGEERQLDIETL 186

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
           +      + ++   +             N ++   +          +      +    ++
Sbjct: 187 KWQNSGKHHLAEGVVSIK--------DANLNSLSVSANFVDGGSLTDMTGEFYVSADSIS 238

Query: 228 YPIIID--LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
               +   +             +   ++         +E+   +   + + +     + +
Sbjct: 239 VMPWLTRYMQAESGIETGTVSLNSWLTLRNSKPVSAYVEVLPSELTWNEDGQHD---LML 295

Query: 286 SRYKLQSILPNSSTDEDN-KTKVSQDEEN 313
                +    +     +     +  D+  
Sbjct: 296 ESGVFKLSPIDGGWQVNGHSLNLRTDDRP 324


>gi|39995786|ref|NP_951737.1| hypothetical protein GSU0680 [Geobacter sulfurreducens PCA]
 gi|39982550|gb|AAR34010.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
 gi|298504794|gb|ADI83517.1| DUF748 repeat protein [Geobacter sulfurreducens KN400]
          Length = 1187

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/290 (10%), Positives = 82/290 (28%), Gaps = 27/290 (9%)

Query: 40  ATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE 99
            +  +G    V  G    ++   S     +++ +   G     + GL  R     +L+GE
Sbjct: 247 LSTTLGITYRVAEGKDPDLMVSGSARLAGVKVAE-HGGVPLLALAGLEARLNRARVLAGE 305

Query: 100 IRVFDMYIDQPHLNFYLSSKGVSNWF-------------QRKSTMDMIHNVILEKIHVKG 146
             +  + +++P ++    + G+ N               ++ ++      V + +  +  
Sbjct: 306 FPLSLVTLERPEIHLARDAAGIWNLQRLAGKKTAAPAAEEKPASPGRKPLVSVAEFRLAD 365

Query: 147 GRIKIID--QESDQVYFLSDLNLQISARFLNIISPLS-----IDSIKGSVIAEGTGNFDN 199
           G +++ D          +  + + +        +                  EG    D 
Sbjct: 366 GAVQLDDRLPAGGFAARVEKIAMTVKGFSTAPGTAADCMLSLATGRGEEARVEGRVTPDP 425

Query: 200 KRSAFKITANFPAKNKAISL--KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF 257
                 +                    P+   +           +   +  G   +A   
Sbjct: 426 LALTGTVQVAGIDLGAYYPYLSPYLTAPVTGKLDAGADIGFSTPDGVRVDKGRIRLASLR 485

Query: 258 SKLLNLELSAKKSRLSGN---FKISDGNVRISRYKLQSILPNSSTDEDNK 304
                 +  A+ + ++G    F   D N+ +   +L+      S +   +
Sbjct: 486 VPFEG-KDEARLAEVAGEDIAFVQKDANLTVGAVRLRDGEIRFSRNGKGE 534


>gi|300926012|ref|ZP_07141835.1| hypothetical protein HMPREF9548_04040 [Escherichia coli MS 182-1]
 gi|301326318|ref|ZP_07219689.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 78-1]
 gi|300417956|gb|EFK01267.1| hypothetical protein HMPREF9548_04040 [Escherichia coli MS 182-1]
 gi|300846984|gb|EFK74744.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 78-1]
 gi|324020755|gb|EGB89974.1| hypothetical protein HMPREF9542_00522 [Escherichia coli MS 117-3]
 gi|324119426|gb|EGC13309.1| adhesin HecA family protein [Escherichia coli E1167]
          Length = 1263

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G  N     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|255020617|ref|ZP_05292680.1| hypothetical protein ACA_1780 [Acidithiobacillus caldus ATCC 51756]
 gi|254970002|gb|EET27501.1| hypothetical protein ACA_1780 [Acidithiobacillus caldus ATCC 51756]
          Length = 395

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 74/262 (28%), Gaps = 25/262 (9%)

Query: 33  REDFERQATLIVGKKIAVKGGIKIHILP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAE 91
           R    +      G+ + +       +      +    + +          +I  L +   
Sbjct: 10  RALLVQALGAATGQPVRLAANPHFFLDRDALGIVLDGLVVG--PAAEPLLQIPRLQLEIA 67

Query: 92  FLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI 151
              L  G +R+  +  D P +           W    S   +      + + V+G  ++ 
Sbjct: 68  LPALFHGRLRLRQVLADAPRI--------RGPWPTHGSGTGLPPLP--QALLVRGASVQW 117

Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFP 211
                 +   L+ LNL      L      S+    G +         ++    ++     
Sbjct: 118 TQA--GRTLELTHLNLGWQRSRLYARGQWSVAGAAGYLAVAARWPSASRLGHGQLQLTVR 175

Query: 212 AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR 271
           +   A  L +Q   L              +  + +  G +        L  L   A+ +R
Sbjct: 176 SSQGADRLHLQASGLQ-------RAGADLHMARLVGRGSWRGREFSLNLEQLAWQAQSAR 228

Query: 272 LS---GNFKISDGNVRISRYKL 290
           LS      + +   + +  ++L
Sbjct: 229 LSCADSRLRTAGAALELRDFQL 250


>gi|270488600|ref|ZP_06205674.1| conserved hypothetical protein TIGR02099 [Yersinia pestis KIM D27]
 gi|270337104|gb|EFA47881.1| conserved hypothetical protein TIGR02099 [Yersinia pestis KIM D27]
          Length = 1198

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 104/327 (31%), Gaps = 33/327 (10%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PS 63
              G   +  V L+ +    +     ++R     +   + G  + V G ++     F P+
Sbjct: 2   FATGATIIVVVALLVSALRMMLPLINEYRPQIVAKIQSVSGIPLDV-GFMQGTWETFGPT 60

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +  +DIR    +      +++ +++  +    LL    +  D+   Q  L+ + +     
Sbjct: 61  LELRDIRAQMPKAD---LQVQRVTLALDVWQSLLHWRWQFRDLTFYQLQLDLHTTLDATQ 117

Query: 123 NWF--QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISP 179
           N         +  I    L++  ++  RI  +     +    +  L    S+        
Sbjct: 118 NNGSNLETGNVHNIFLRQLDRFDLRNSRISFLTPSGPRAELEIPQLTWLNSSTRHRAEGQ 177

Query: 180 LSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID--LFG 236
           +S+ +I G   + +   +  + +                ++ +Q   +     I   L  
Sbjct: 178 ISLSTINGQHGVVQVRMDLHDNQGILN----------NGTVYMQADNIDLKPWISRWLQN 227

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
           N   +  +   +   S+        N+ LS  ++  +     +   + +  + L+     
Sbjct: 228 NTGLDNAEFSLAAWLSIKSGEVYRGNVLLSQGQANWT--VGSNSHQLSVDNFVLEGRRQG 285

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAE 323
           +    D           +LN   +G  
Sbjct: 286 NGWQID---------APVLNLKTDGQA 303


>gi|110807107|ref|YP_690627.1| hypothetical protein SFV_3272 [Shigella flexneri 5 str. 8401]
 gi|110616655|gb|ABF05322.1| Uncharacterized membrane protein [Shigella flexneri 5 str. 8401]
          Length = 1266

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G S+     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|85058138|ref|YP_453840.1| hypothetical protein SG0160 [Sodalis glossinidius str. 'morsitans']
 gi|84778658|dbj|BAE73435.1| putative exported protein [Sodalis glossinidius str. 'morsitans']
          Length = 1271

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/335 (11%), Positives = 94/335 (28%), Gaps = 38/335 (11%)

Query: 2   LRRV---LIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56
           ++R+   L+ +G    V++    +           FR              I ++  +K 
Sbjct: 1   MKRLPGILMAIGVTLIVLVALTVSALRLALPHLDRFRPQIVSVLNRAFDADIQLR-QLKS 59

Query: 57  HILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
               F P++    I             ++ +++  +    LL    +  D+   +  L+ 
Sbjct: 60  SWQSFGPTLDIGGI---DAATADERLHVQRVTLALDVWQSLLHWRWQFRDVTFYRLQLDL 116

Query: 115 YLSSKGVSNWFQR--KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQ 168
             +  G  +            +     +   ++G +I  +    ++       L+ LN  
Sbjct: 117 NTTLMGRDHRGSPISSDRFSNLFLRQFDHFILRGSQITFLTPSGERTRLSVPQLTWLNTL 176

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
              R    IS  S +  +G++      +                 N  + L+ +   L  
Sbjct: 177 NRHRVEGKISLSSTEVQQGAIDVRMDLHDQQ----------GLLDNGKVYLQARDVDLKP 226

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
                L  N          +   ++        ++ LS     L  +       + + R 
Sbjct: 227 WFSQLLQSNTGLQSADFSLAAWLTLEKGEIAGADVLLSRGA-ALWQDGD-QTHRLDVDRM 284

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
            L      ++            E   LN + +G  
Sbjct: 285 ALHLSKRQNAWQM---------EVPTLNIATDGQS 310


>gi|74313775|ref|YP_312194.1| hypothetical protein SSON_3387 [Shigella sonnei Ss046]
 gi|73857252|gb|AAZ89959.1| Uncharacterized membrane protein [Shigella sonnei Ss046]
          Length = 1266

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G S+     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|193070335|ref|ZP_03051278.1| conserved hypothetical protein [Escherichia coli E110019]
 gi|192956394|gb|EDV86854.1| conserved hypothetical protein [Escherichia coli E110019]
          Length = 1266

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G S+     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|253771925|ref|YP_003034756.1| hypothetical protein ECBD_0501 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163182|ref|YP_003046290.1| hypothetical protein ECB_03105 [Escherichia coli B str. REL606]
 gi|242378782|emb|CAQ33573.1| conserved membrane protein, predicted transporter [Escherichia coli
           BL21(DE3)]
 gi|253322969|gb|ACT27571.1| uncharacterized protein YhdP [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253975083|gb|ACT40754.1| conserved membrane protein, predicted transporter [Escherichia coli
           B str. REL606]
 gi|253979239|gb|ACT44909.1| conserved membrane protein, predicted transporter [Escherichia coli
           BL21(DE3)]
          Length = 1266

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G S+     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|227825201|ref|ZP_03990033.1| predicted protein [Acidaminococcus sp. D21]
 gi|226905700|gb|EEH91618.1| predicted protein [Acidaminococcus sp. D21]
          Length = 1439

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 45/341 (13%), Positives = 99/341 (29%), Gaps = 24/341 (7%)

Query: 3   RRVLIGLGFLFSVVLVGA-FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R+   L  + ++ +      +P  +     R   E  A   +  K+ +    +I + P 
Sbjct: 7   KRLPFLLLVIPALYVGTFKVLMPRVLPT--VRPMVEETAAQYINGKLHID---RIEVSPD 61

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE---IRVFDMYIDQPHLNFYLSS 118
            +   KD  I  +      +KI  +++R   L LL G      V  + I+ P +   + S
Sbjct: 62  LTFRIKDSAIYDRAGIL-VAKIPEVAVRVNPLNLLLGHGTSRMVSLVAINNPTVYMVMDS 120

Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL-----NLQISARF 173
               N        +         + V  G I++           S       N       
Sbjct: 121 SDRWNVENLIKKSESSSEDFRGLVTVNRGSIQLSTPYGTWHVGASGSIDLVHNPVYGLDM 180

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
                      + GS+ ++GTG        F +T           +           +  
Sbjct: 181 DLTTEKGETLQLIGSIKSDGTGEVSASTETFCVTPYAALVAHYAPI-----AELAGTLSK 235

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
           L      ++++   SG          +    L    + + G     + ++  + + +   
Sbjct: 236 LSVTWRNDDQESKLSGSVKADSLSLSVHKDNLLLPLTAV-GTVHFDNKDLAFTDFTVSLD 294

Query: 294 LPNSSTDEDNKTKVSQDEENLL-NFSENGAESMHDLNETDF 333
               S   +    ++  +  +   F+    +   D    D 
Sbjct: 295 RS--SVTLNGGLDLTDAQTPVFHQFAVKTDDFDLDAIPLDL 333


>gi|254461737|ref|ZP_05075153.1| conserved hypothetical protein [Rhodobacterales bacterium HTCC2083]
 gi|206678326|gb|EDZ42813.1| conserved hypothetical protein [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 1102

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 68/209 (32%), Gaps = 27/209 (12%)

Query: 5   VLIGLGFLFSVVLVGAFTVPL--FIDWTDFREDFERQATLIV-GKKIAVKGGIKIHILPF 61
           VL GLG     + +G   +           ++  + +    +    IA+ G + + I P 
Sbjct: 30  VLTGLGGFVVALAIGFILLVGRDIKAPDWLQKQIDVKIAEALPNVDIAI-GTMSLRIEPS 88

Query: 62  ---PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
              P VFF+++ +   E G   + +  LS+RA F   + G+     + +    +     S
Sbjct: 89  DLSPRVFFQNVSVKD-ETGLPFASLGELSVRAAFPAAIRGQFLPKKISLSGALMKLRRGS 147

Query: 119 KGVSNWFQRKSTMDMIHNVI-------------------LEKIHVKGGRIKIIDQESDQV 159
            G  +     +                            L +++     +   D  + + 
Sbjct: 148 DGGFDLTIGSALQVSGEGASLIALIESLDSLLVQHELRYLREVNATSLTVLYEDARAGRA 207

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGS 188
           + +    ++I++    +        + G 
Sbjct: 208 WTVDGGRMRINSDGEALTIGADFALLGGQ 236


>gi|83816380|ref|YP_445385.1| hypothetical protein SRU_1261 [Salinibacter ruber DSM 13855]
 gi|83757774|gb|ABC45887.1| Domain of unknown function (DUF490) family [Salinibacter ruber DSM
           13855]
          Length = 1689

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/266 (12%), Positives = 71/266 (26%), Gaps = 15/266 (5%)

Query: 63  SVFFKDIRIDQKEDGS----FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
           S+   D+ + +           + ++ L++      LL G + +  + ID P      ++
Sbjct: 53  SLRLADVSLTRPAPDRAAPATMAHVDSLAVEYRPWALLRGRLHLTAVSIDGPSATLRQAA 112

Query: 119 KGVSNW-------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
               +W                   + ++++ V  G          +        L I A
Sbjct: 113 DSTWDWARHLPASAPASEDTSAALPIRVDRLRVSAGTFAAQFYAGGRDSTARIQGLTIRA 172

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
           + L     LS+     ++   G    D              +  A+   ++L      + 
Sbjct: 173 QDL--YYGLSMGGRLDTLGLRGRLPTDTTELRLAARGAVSERRVALD-TLRLASPRSAVQ 229

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS-DGNVRISRYKL 290
                 L       +     SV  D   L +L   A    +     +     +  S  +L
Sbjct: 230 GGGTARLPAAPGDSLDDVALSVRADPLVLGDLTAFAPFLDVDPREALDLRARLTGSEDRL 289

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLN 316
                 +  D   +          L 
Sbjct: 290 ALTTDVTVRDGGGRFTAEATATPHLA 315


>gi|238921342|ref|YP_002934857.1| hypothetical protein NT01EI_3486 [Edwardsiella ictaluri 93-146]
 gi|238870911|gb|ACR70622.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 1261

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/331 (9%), Positives = 93/331 (28%), Gaps = 33/331 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56
           +RR+   L+       V++    +    +       R     +    +G  + + G +  
Sbjct: 1   MRRLSGYLLATLATLIVLVALLVSGLRLLLPHIDSVRPQIAARLGQFIGAPLTI-GELSA 59

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNF 114
                 P +  +DI +  ++      ++  +++  +    L     +  D+   Q   + 
Sbjct: 60  SWHAFGPMLEARDIALRGEQG---LLQVRRMTLGLDVWQSLLHARPQFRDLTFYQLQAST 116

Query: 115 YL-SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQES-DQVYFLSDLNLQISAR 172
               ++   +   ++  +  I     +   ++  R++            +S L       
Sbjct: 117 DRPLAREEGHGGLKRDELSNIFLRQFDHFTLRDSRLRFPSPSGVPLQLTVSQLTWVNGPE 176

Query: 173 FLNIISPLSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
                  +S  + +G     +   +  +K                  + +Q   +     
Sbjct: 177 RHRAEGEVSFSTPQGQHGNLQLRMDLRDKNGLLS----------DGEIYLQADQIDLRPW 226

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
           +  + N         +S    ++    +L    +  +  +           + ++   LQ
Sbjct: 227 LSRWINRNTGLNAADFSLASWLSVRDGELAGALIRLRDGQAGWRADDRPHRLTVNDLTLQ 286

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGA 322
           +   +     D            LN + +G 
Sbjct: 287 ATRRDGGWQLD---------VPRLNLATDGQ 308


>gi|194439215|ref|ZP_03071296.1| conserved hypothetical protein [Escherichia coli 101-1]
 gi|194421911|gb|EDX37917.1| conserved hypothetical protein [Escherichia coli 101-1]
          Length = 1266

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G S+     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|160899692|ref|YP_001565274.1| AsmA family protein [Delftia acidovorans SPH-1]
 gi|160365276|gb|ABX36889.1| AsmA family protein [Delftia acidovorans SPH-1]
          Length = 791

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 42/452 (9%), Positives = 106/452 (23%), Gaps = 101/452 (22%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFP------------SVFFKDIR 70
               DW   +     + +   G+  A++G +++    P P            ++  + + 
Sbjct: 82  IATFDWNRAKPWVNERVSESTGRHFAIEGDLRLRWTWPQPLDQGWRHWVPGVTIEAEQLA 141

Query: 71  IDQKEDGS----FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP---------------- 110
           + Q E            + L         L+      +   +QP                
Sbjct: 142 LGQPEGWQVEQEPAKGSDELPALPAPPDQLNKGRLPEEKAKEQPKGKAKDKDEGKDKDSQ 201

Query: 111 --------HLNFYLSSKGVSNWFQRKST---------------MDMIHNVILEKIHVKGG 147
                     +  + +        R +                  +  +V+L+ + ++G 
Sbjct: 202 ASPSAPKIDSDSIVLADEKMAPPPRDAGTMATAARATASLRLWPLLGRHVLLDHLQLEGP 261

Query: 148 RIKIIDQESDQ---------------VYFLSDLNLQISARFLNI-----ISPLSIDSIKG 187
            +    ++                   + ++ L+L+      +           +DS+  
Sbjct: 262 DLVFARRKDGSNNWTFKRPESTGPRWRFQVAQLSLRGGLVGWSDGVRQMAVRARLDSLVQ 321

Query: 188 SVIAEG--------TGNFDNKRSAFKITANF--PAKNKAISLKIQLFPLAYPIIIDLFGN 237
               +         TG         +         +++     ++L+  A  +     G 
Sbjct: 322 PPSPDFPYGMRVGLTGRIAKATVEAQGLIGPVLDLQSEQARFPVKLWAHAGSLRARAEGI 381

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------LSGNFKISDGNVRISRY 288
           L              + G     L         R         L G+ +          +
Sbjct: 382 LDNPRALKGMDLQVRLRGSSMADLFPLTGLLLPRTPPFDTNGHLVGSLEPGRAVWDYEEF 441

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDDLK 347
             +    +           S      L+      +    DL         ++  K     
Sbjct: 442 DGRVGQSDLRGTLH---YASGKPRPKLSGDLASRKLRLADLGPVVGAPSTKQGQKTRQAA 498

Query: 348 KDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                 +      K N+ D +    F  D++ 
Sbjct: 499 SGKALPTQRFDTSKWNAMDMDV--RFKSDRIE 528


>gi|332709716|ref|ZP_08429675.1| hypothetical protein LYNGBM3L_43890 [Lyngbya majuscula 3L]
 gi|332351543|gb|EGJ31124.1| hypothetical protein LYNGBM3L_43890 [Lyngbya majuscula 3L]
          Length = 2256

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 90/300 (30%), Gaps = 15/300 (5%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66
           I    +   + +  +       + +     E + + ++ + + V     +++    S+  
Sbjct: 34  ITFAMISLTIGLVGYFGVRMWLYQNLPGWIETELSNVIKRDVRVGQLKALYL---TSLEL 90

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS-NWF 125
               I           I+ + +    LPLL        + +    +     + G   N  
Sbjct: 91  GPSSIPATTTDPDHVAIKAIKVGFNPLPLLVKRSLPVTINLVNVDVYAQQEANGEWINLK 150

Query: 126 QRKSTMDMIHNVILE-KIHVKGGRIKIIDQESDQVYFLS-DLNLQISARFLNIISPLSID 183
                      + L+ K+ V  G+I ++       + L  D    +S     +   ++  
Sbjct: 151 DLNFDNSFSPPIDLDAKVRVWNGKIALLPYGQTNPFKLKLDATAGLSNNNKRLKYSITTA 210

Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL------KIQLFPLAYPIIIDLFGN 237
             +G    EG       +S  ++     A  + + L       I     +  +   L  +
Sbjct: 211 IAEGKTKLEGKTWLTTGQSQARVNVQNLALAELMPLIRAVIPNIPANLQSGELDAKLNIS 270

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297
           L   ++ P   G     G   ++  L+   K    +   +     VR+ + +       +
Sbjct: 271 LPSVKEIPDVKGKAEFKGIQVQVNPLKAPVKA---NARLRFQGDQVRLEKTQGSYGAIEA 327


>gi|254038405|ref|ZP_04872463.1| membrane protein [Escherichia sp. 1_1_43]
 gi|226840029|gb|EEH72050.1| membrane protein [Escherichia sp. 1_1_43]
 gi|309703666|emb|CBJ03007.1| possible exported protein [Escherichia coli ETEC H10407]
          Length = 1266

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G S+     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|170018511|ref|YP_001723465.1| hypothetical protein EcolC_0461 [Escherichia coli ATCC 8739]
 gi|169753439|gb|ACA76138.1| uncharacterized membrane protein [Escherichia coli ATCC 8739]
          Length = 1266

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G S+     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|269140473|ref|YP_003297174.1| hypothetical protein ETAE_3132 [Edwardsiella tarda EIB202]
 gi|267986134|gb|ACY85963.1| putative exported protein [Edwardsiella tarda EIB202]
 gi|304560265|gb|ADM42929.1| Possible exported protein [Edwardsiella tarda FL6-60]
          Length = 1262

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/331 (9%), Positives = 93/331 (28%), Gaps = 33/331 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56
           +RR+   L+       V++    +    +       R     +    +G  + + G +  
Sbjct: 1   MRRLPGYLLATLATLIVLVALLVSGLRLLLPHIDSVRPQIAARLGQFIGAPLTI-GALSA 59

Query: 57  HILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNF 114
               F P++  +DI +   +      ++  +++  +    L     +  D+   Q   + 
Sbjct: 60  SWQSFGPTLEARDIALRGAQGQ---LQVRRMTLGLDVWQSLLHVRPQFRDLTFYQLQAST 116

Query: 115 YL-SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQES-DQVYFLSDLNLQISAR 172
               ++   +   ++  +  I     +   ++  R++            +S L       
Sbjct: 117 DRPLAREEGHGGLKRDELSNIFLRQFDHFTLRDSRLRFPSPSGVPLQLTVSQLTWLNGPD 176

Query: 173 FLNIISPLSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
                  +S  + +G     +   +  +K                  + +Q   +     
Sbjct: 177 RHRAEGEVSFSTPQGQHGNLQLRMDLRDKNGLLS----------DGEIYLQADQIDLRPW 226

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
           +  + N         +S    ++    ++    +  +  +           + +    LQ
Sbjct: 227 LSRWINHNTGLNAADFSLASWLSVRNGEMAGALVRLRDGQAGWRADDRPHRLTVRDLTLQ 286

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGA 322
           +   +     D            LN + +G 
Sbjct: 287 ATRRDGGWQLD---------VPRLNLATDGQ 308


>gi|194434889|ref|ZP_03067135.1| conserved hypothetical protein [Shigella dysenteriae 1012]
 gi|194416865|gb|EDX32988.1| conserved hypothetical protein [Shigella dysenteriae 1012]
          Length = 1266

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++    IR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHGIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G S+     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  +I       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRIWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|260857365|ref|YP_003231256.1| hypothetical protein ECO26_4344 [Escherichia coli O26:H11 str.
           11368]
 gi|260869989|ref|YP_003236391.1| hypothetical protein ECO111_4065 [Escherichia coli O111:H- str.
           11128]
 gi|257756014|dbj|BAI27516.1| conserved predicted membrane protein [Escherichia coli O26:H11 str.
           11368]
 gi|257766345|dbj|BAI37840.1| conserved predicted membrane protein [Escherichia coli O111:H- str.
           11128]
          Length = 1266

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G S+     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|49176330|ref|YP_026208.1| conserved membrane protein, predicted transporter [Escherichia coli
           str. K-12 substr. MG1655]
 gi|89110007|ref|AP_003787.1| conserved membrane protein, predicted transporter [Escherichia coli
           str. K-12 substr. W3110]
 gi|170082776|ref|YP_001732096.1| membrane protein, transporter [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238902346|ref|YP_002928142.1| conserved membrane protein, putative transporter [Escherichia coli
           BW2952]
 gi|301028270|ref|ZP_07191531.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           196-1]
 gi|331643944|ref|ZP_08345075.1| conserved hypothetical protein [Escherichia coli H736]
 gi|55977799|sp|P46474|YHDP_ECOLI RecName: Full=Uncharacterized protein yhdP; Flags: Precursor
 gi|48994929|gb|AAT48173.1| conserved membrane protein, predicted transporter [Escherichia coli
           str. K-12 substr. MG1655]
 gi|85676038|dbj|BAE77288.1| conserved membrane protein, predicted transporter [Escherichia coli
           str. K12 substr. W3110]
 gi|169890611|gb|ACB04318.1| conserved membrane protein, predicted transporter [Escherichia coli
           str. K-12 substr. DH10B]
 gi|238860255|gb|ACR62253.1| conserved membrane protein, predicted transporter [Escherichia coli
           BW2952]
 gi|260447727|gb|ACX38149.1| conserved hypothetical protein [Escherichia coli DH1]
 gi|299878647|gb|EFI86858.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           196-1]
 gi|315137830|dbj|BAJ44989.1| hypothetical protein ECDH1ME8569_3133 [Escherichia coli DH1]
 gi|331037415|gb|EGI09639.1| conserved hypothetical protein [Escherichia coli H736]
          Length = 1266

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G S+     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|319940801|ref|ZP_08015140.1| hypothetical protein HMPREF9464_00359 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805683|gb|EFW02464.1| hypothetical protein HMPREF9464_00359 [Sutterella wadsworthensis
           3_1_45B]
          Length = 728

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 48/382 (12%), Positives = 99/382 (25%), Gaps = 26/382 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR  ++ L FL  + L     + L+                 +G +  + G +++  LP 
Sbjct: 4   LRTTIVILLFLSLLALSLVGALTLYATPERVTARAAAMLESHLGLRAELSGDVELKRLPK 63

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             +      +   +D +   +     +      L +   RV  + +D+  LN    +K +
Sbjct: 64  LILRIPAGELIHTKDSTHAGRFASAEIELAPWSLFAQSPRVDRVAVDRLELNDISYAKLL 123

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            N               ++++ +    I+           LS L+ + S       +   
Sbjct: 124 ENTTSSAEH----AVWNIDQLELTQASIRFDALPHVGAGMLSALDAEFSNLSETGGTVRL 179

Query: 182 IDSIKGSVIAEGTGNF--DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
             ++        +     +                   +   Q   +         G   
Sbjct: 180 AGTLTLPQAPSISAALVSEGSAQTLNGLTGTLTFTGVFTFDAQKGLVLQMPAATFDG--- 236

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
                  +    S +   S  +     A+K  L G+ +                 P +S 
Sbjct: 237 -ISGSMNFKASASASRLTSAPMGQPWIAEKPALGGSLR--------ESTTFSIQAPTASI 287

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDF----FEEEEKKNKNDDLKKDDIQYSV 355
             D        E        + A+    L  T      +     K    DL       +V
Sbjct: 288 TSDG----VFAEYASARGQLSAAKRNWSLAGTAGVDLSWANGSLKLSALDLSSSTDSTTV 343

Query: 356 NKKEEKDNSHDKENQENFSGDK 377
           N+     N      Q +  G  
Sbjct: 344 NRLTGTLNLSADTLQTDLEGTF 365


>gi|86147834|ref|ZP_01066140.1| hypothetical protein MED222_17275 [Vibrio sp. MED222]
 gi|85834361|gb|EAQ52513.1| hypothetical protein MED222_17275 [Vibrio sp. MED222]
          Length = 1290

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/329 (6%), Positives = 90/329 (27%), Gaps = 28/329 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTV-PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           +LR  L  +  L   + +   T+     +   ++ + E       G + +++        
Sbjct: 8   ILRTCLWLVVTLLVTLAIAVTTLRVALPNLNKYQSEIELWVNQHSGFEFSIQDVGGFWRN 67

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG------EIRVFDMYIDQPHLN 113
             PS+  + ++            +E + +  + +  +        ++ +  MY+D   ++
Sbjct: 68  THPSIALQGVKASLPNAEDVAFSVERVEVEFDLIQSVVQMRPVVADLVMNQMYLDIRSID 127

Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVI------LEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
            +    G        S+  ++  +       L  +  K   +      S +   L    L
Sbjct: 128 LFAGQNGKDEPKDPGSSKRVMQELDNLLLKTLVDVTAKDSSLLYRT-ISGEERQLDIETL 186

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
           +      + ++   +             N ++   +          +      +    ++
Sbjct: 187 KWQNSGKHHLAEGVVSIK--------DANLNSLSVSANFVDGGSLTDMTGEFYVSADSIS 238

Query: 228 YPIIID--LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
               +   +             +   ++         +E+   +   + + +     + +
Sbjct: 239 VMPWLTRYMQAESGIETGTVSLNSWLTLRNSKPVSAYVEVLPSELTWNEDGQHD---LML 295

Query: 286 SRYKLQSILPNSSTDEDN-KTKVSQDEEN 313
                +    +     +     +  D+  
Sbjct: 296 ESGVFKLSPIDGGWQVNGHSLNLRTDDRP 324


>gi|332139673|ref|YP_004425411.1| putative protease [Alteromonas macleodii str. 'Deep ecotype']
 gi|327549695|gb|AEA96413.1| putative protease [Alteromonas macleodii str. 'Deep ecotype']
          Length = 1331

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 83/293 (28%), Gaps = 15/293 (5%)

Query: 33  REDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92
           +   E       G  +++K    +     PS+    + + + E       I  + +  +F
Sbjct: 44  KHLLEDYINEQYGVNLSIKSVHAVWQRSGPSIVLNSVSLAKDEASPVALDIRQIYVELDF 103

Query: 93  LPLLSGE-IRVFDMYIDQPHLNF--YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149
              L  + I      +    L+      S G  N F   + ++ +    L+   ++ G +
Sbjct: 104 WQSLRDQLISSTRFELRGLRLDIDADRLSGGGKNNFPVVNALERLFLEQLQSFSLEDGAV 163

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209
            I        + +  L+     +    +  L +  +  +  A    + +  R  F     
Sbjct: 164 SITHLNETNSFDIESLSWNNRKQRHQGLGRLKVADLAAN-SASFIIDINGTREDFDGVFY 222

Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP---IYSGVFSVAGDFSKLLNLELS 266
             A+   IS  +         +     N           I S    +     +  +    
Sbjct: 223 AKAEELDISPWVSDLIKTKRPLAQSRANFEVWANFANNEITSVQAELNDSLLEWGDGRAK 282

Query: 267 AKKSRLSGNFKISDGN--------VRISRYKLQSILPNSSTDEDNKTKVSQDE 311
                 SG+ +             VR+ +  L S     +TD       + D 
Sbjct: 283 TITGISSGSLQALPNKKSKRGGWNVRVDQLVLNSGNETMTTDLIGSISANGDA 335


>gi|258590999|emb|CBE67294.1| exported protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 1006

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 68/234 (29%), Gaps = 20/234 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R+       +  + L  A  V L +          R A    G +  + G   I   P 
Sbjct: 1   MRK-FKSTLIVLLLGLTTAVVVGLLVITLFLPLLLRRFACAPYGIRCTI-GQANIRPRPN 58

Query: 62  PSVFF--KDIRIDQKEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLSS 118
            +V      + +   +      +++ L+   +    +L+ ++   D+ +  P L F    
Sbjct: 59  LTVDLVIDHLILSDPDGRGVALRVKRLAATLDIPGLILTRQVMPTDVQVGSPELFFRQLD 118

Query: 119 KGVSNWFQRKS-------TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
            G  N                    +   +  +  G ++I D      + ++D+ + +  
Sbjct: 119 DGRWNLQALAQEVQRHLRPAARPSRLQFPRASLTNGTLQIRD------HRVTDIRVALEP 172

Query: 172 RFLNIISPLSIDSIKG--SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
           +   ++  +   +     SV   G      +                  L  Q 
Sbjct: 173 KSFPMLLEMQAQAAVSGRSVRVSGALQNTLEGQILAQVQEVAQPGIPRPLTAQA 226


>gi|117921019|ref|YP_870211.1| hypothetical protein Shewana3_2578 [Shewanella sp. ANA-3]
 gi|117613351|gb|ABK48805.1| protein of unknown function DUF748 [Shewanella sp. ANA-3]
          Length = 1076

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/358 (10%), Positives = 120/358 (33%), Gaps = 43/358 (12%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68
           +    +++ +    +   +           +   ++G+ + ++  ++++   F  V  + 
Sbjct: 21  ILAYLTIIYLSYLIILGLVLPKAVVSFAPEKLAEVLGRPVTLQ-DMRVNPFTF-QVNIEQ 78

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL-----SSKGVS 122
             + +K++    + +  L     F   + +  + +  + +  P  N         ++G +
Sbjct: 79  FEVKEKDN-QAFAGLSQLQFEVNFWQSVFNQAVVIDHIQLQGPFANIRRFQTQGKTQGKT 137

Query: 123 NW-----------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
            +                  +  +       VIL +  +  G++K  D+ +  +    ++
Sbjct: 138 QFNFDDIITTLNQAKTPSEPETAAENTPPPRVILGEFSLTAGKVKFDDKITQALVDYPNI 197

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFD----NKRSAFKITANFPAKNKAISLKI 221
           N ++          L   +    V  + T   D    +  +    + + P          
Sbjct: 198 NFKLGQLDTEY---LMTANPASPVKGQATTYQDKPATDTPTTQANSTSNPPSILHNQFVA 254

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL------NLELSAKKSRLSGN 275
           QL    +   + L G       + +     +                ++L+A +  +S +
Sbjct: 255 QLQ-DVHAGEVSLAGQFQLFPFKLVGDAQLAKLQLAPLWQFVAEQFKVKLAAGELSISSH 313

Query: 276 FKIS---DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330
           +++    DGNV+++  + Q I+        +++ ++     +   + N A+   D+ +
Sbjct: 314 YQVELPADGNVQLTVERGQVIVEKVDLLNGDQSVIALPLLAIDGINLNLAKQRVDIKQ 371


>gi|82778553|ref|YP_404902.1| hypothetical protein SDY_3421 [Shigella dysenteriae Sd197]
 gi|309785571|ref|ZP_07680202.1| uncharacterized protein yhdP [Shigella dysenteriae 1617]
 gi|81242701|gb|ABB63411.1| Uncharacterized membrane protein [Shigella dysenteriae Sd197]
 gi|308926691|gb|EFP72167.1| uncharacterized protein yhdP [Shigella dysenteriae 1617]
          Length = 1266

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G S+     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWVQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|300917436|ref|ZP_07134101.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           115-1]
 gi|300415346|gb|EFJ98656.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           115-1]
          Length = 1263

 Score = 59.9 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/314 (11%), Positives = 87/314 (27%), Gaps = 22/314 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ + +  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVILALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G S+     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +   + L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVNNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSST 299
           S    +  +  +  
Sbjct: 295 SIPDTRITMDGNPW 308


>gi|262367296|gb|ACY63853.1| hypothetical protein YPD8_3183 [Yersinia pestis D182038]
          Length = 783

 Score = 59.9 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 104/327 (31%), Gaps = 33/327 (10%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PS 63
              G   +  V L+ +    +     ++R     +   + G  + V G ++     F P+
Sbjct: 2   FATGATIIVVVALLVSALRMMLPLINEYRPQIVAKIQSVSGIPLDV-GFMQGTWETFGPT 60

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +  +DIR    +      +++ +++  +    LL    +  D+   Q  L+ + +     
Sbjct: 61  LELRDIRAQMPKAD---LQVQRVTLALDVWQSLLHWRWQFRDLTFYQLQLDLHTTLDATQ 117

Query: 123 NWF--QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISP 179
           N         +  I    L++  ++  RI  +     +    +  L    S+        
Sbjct: 118 NNGSNLETGNVHNIFLRQLDRFDLRNSRISFLTPSGPRAELEIPQLTWLNSSTRHRAEGQ 177

Query: 180 LSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID--LFG 236
           +S+ +I G   + +   +  + +                ++ +Q   +     I   L  
Sbjct: 178 ISLSTINGQHGVVQVRMDLHDNQGILN----------NGTVYMQADNIDLKPWISRWLQN 227

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
           N   +  +   +   S+        N+ LS  ++  +     +   + +  + L+     
Sbjct: 228 NTGLDNAEFSLAAWLSIKSGEVYRGNVLLSQGQANWT--VGSNSHQLSVDNFVLEGRRQG 285

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAE 323
           +    D           +LN   +G  
Sbjct: 286 NGWQID---------APVLNLKTDGQA 303


>gi|329850514|ref|ZP_08265359.1| hypothetical protein ABI_34210 [Asticcacaulis biprosthecum C19]
 gi|328840829|gb|EGF90400.1| hypothetical protein ABI_34210 [Asticcacaulis biprosthecum C19]
          Length = 1388

 Score = 59.9 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/340 (9%), Positives = 88/340 (25%), Gaps = 35/340 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV-GKKIAVKGGIKIHIL--- 59
           R+ +    L  +++         I     R     +    + G K ++   + +      
Sbjct: 18  RLFVFGWLLLMLLVFAWRLSLGPIRIDGIRPLIISRIEATLPGTKASID-HLDLAWFAGA 76

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                 F ++ I          +   L        L+ G      +      +   +S +
Sbjct: 77  RGVGFRFDNLIIQD-SSKRTIVRAGRLETALAADSLILGHFAPARLTASDVLVVASVSKE 135

Query: 120 GVSNWFQRKSTMDMIHNVILEKI--------------------HVKGGRIKIIDQESDQV 159
           G  +               L++                      V+ G++++I + SD  
Sbjct: 136 GRYDLGFDARGKPGAGPAGLDRFFFDLTGEEKLGRPASFARQVSVRNGQLRLIQEGSDLD 195

Query: 160 YFLSDLNLQISARFLNIISPLSI----DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215
           +      +  S     + +   +       + S  A+  G    K++             
Sbjct: 196 WTARIAAIDFSKLKGRLEAKADLTIVGADSQASFQAQANGVIGLKQATISANLKQLVPAH 255

Query: 216 AIS---LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
                 +   L  +  P+      +    +                           +R+
Sbjct: 256 VFPSVGVTRHLAAIDAPVNGLARFDYSLAKGFDGAWVDLDAGAGHVAFGGSRQVFDSARI 315

Query: 273 SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312
              +  +D   +   ++++S L +  TD   K  ++  + 
Sbjct: 316 RATYNSTDHTAQFQTFRVRSHLLD--TDLSGKVVITPADR 353


>gi|282879719|ref|ZP_06288449.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
 gi|281306388|gb|EFA98418.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
          Length = 1542

 Score = 59.9 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 41/362 (11%), Positives = 115/362 (31%), Gaps = 45/362 (12%)

Query: 2   LRRVLIGLGFLFSV------VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55
           +++ LI +  +  +      ++     +P    W    +   R A+  +G ++++    K
Sbjct: 1   MKKALIWIVSIIGIPALLLTLVAILLYIPPVQQW--LVQQTTRYASKKLGLEVSID---K 55

Query: 56  IHILPFPSVFFKDIRIDQKEDGSFESK-----IEGLSMRAEFLPLLSGEIRVFDMYIDQP 110
           + +     +  +++ I +  D   + K      + +    + LPL   ++ + ++  +  
Sbjct: 56  VRLAFPLDLSMENVLIIRPNDSLPQMKDTIGFAQRMVADVQLLPLFKKKVEIDELKFEGL 115

Query: 111 HLN--------FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI--------IDQ 154
           HLN            + G                V ++K+ ++  ++ +           
Sbjct: 116 HLNSSDFIAAAHVRGTIGQLALVSH-GIDISGSVVNVDKLALEDAKLVVTLPDTVPEDTS 174

Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF---KITANFP 211
           +S  ++ ++  +LQ+    + +  P     ++  +   G                     
Sbjct: 175 QSKSIWKINVDDLQVRHTDVTVHFPGDTLQVRTYL---GKAKVSKGFFDLGEGNYQVGRF 231

Query: 212 AKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL----ELSA 267
                  L            ID       N +  I +  +  +     +  +        
Sbjct: 232 -DWTDGELNYDNKWKGRTKGIDYNHLALSNIEVGIDALQYHASKLKLNVRQMAFKERSGF 290

Query: 268 KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN-LLNFSENGAESMH 326
              +LSG   +    + + + K+++   N   D D       ++    LN + + +   +
Sbjct: 291 DLQKLSGALALDSTKLYMRQVKMRTSSSNLLADVDMDLNSFSNQNPGKLNLTLHASLGKN 350

Query: 327 DL 328
           DL
Sbjct: 351 DL 352


>gi|91775709|ref|YP_545465.1| hypothetical protein Mfla_1356 [Methylobacillus flagellatus KT]
 gi|91709696|gb|ABE49624.1| protein of unknown function DUF748 [Methylobacillus flagellatus KT]
          Length = 1181

 Score = 59.9 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 54/352 (15%), Positives = 123/352 (34%), Gaps = 38/352 (10%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FPS 63
            L+ LGF  S +L G F +         +      A   +  ++ V+   ++   P   +
Sbjct: 20  FLMVLGFWVSYLLFGYFAINPI-----AQRLLPWVAENKLASRLQVE---RVDYDPLRIA 71

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
           +    +++   E  S  +  E L    E   L     R+ D+ +  PH++  +   G SN
Sbjct: 72  LTVNQLQLTTPEGVS-LAGFERLHADLELSGLFRLAWRLKDIQLSAPHVSVEVLPGGESN 130

Query: 124 WF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF--LSDLNLQISA- 171
           W            +   + +  ++++ I ++ G I+ +D    + +   L  L L++   
Sbjct: 131 WAKLIAKLNENPDEEKSEGMTRLLVDHILIERGDIEYMDHNRPEPFRAVLEPLGLELDGF 190

Query: 172 -----RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL----KIQ 222
                   +      +    G++  +G    +   S+ K+        K + +     + 
Sbjct: 191 STLPEDLGDYAILAKLPEQGGTLKWKGELGLNPMVSSGKVELEGLKLAKLLEVLPPEALP 250

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIY---SGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
           +   A  +   L       E +P     +   ++    + LL  +    K  L     + 
Sbjct: 251 VKLEAGLLRTRLDYQFALVEDKPEATIRNFSLALDEAAATLLQSQAQQGKVALK-QLAVE 309

Query: 280 DGNVRISRYKLQSILPNS-STDEDNKTKVSQDEENLLNFSE-NGAESMHDLN 329
             +++        +  ++     D   K++QD++ LL+      A+   DL 
Sbjct: 310 LPSLQFRMNDQAQMQFDALKLVLDG-LKLAQDDKPLLDLPAVTVADVALDLQ 360



 Score = 41.0 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 88/291 (30%), Gaps = 33/291 (11%)

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
                +    +++ Q  D      +  +++    L L + ++ +    I+Q  +      
Sbjct: 325 FDALKLVLDGLKLAQ--DDKPLLDLPAVTVADVALDLQARKLDIGSFSIEQGEVKAVRQR 382

Query: 119 KGVSNW--------------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
            G  NW                     +     +   ++ L +  + G ++   D+   +
Sbjct: 383 DGSVNWQQLHIAPEQPEQQPAEVEPDAEAAVDTETPWSIHLNQARIDGLKLDYQDETFKR 442

Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218
              ++   L ++  F +      ++S++GS+    +              +   +   + 
Sbjct: 443 PLQVAADKLSLNLAFASEQGNSRVESLQGSIGP-FSVRSGANGKPVARLESLVLQGGQVD 501

Query: 219 LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN--F 276
           L  +   L   ++  L  ++  + KQ  +  +   A   +       +A+    +G   +
Sbjct: 502 LAARQAGLEALVLKGLSADVLRDAKQVNWQAILEPAQSSTSQKTQPKTARAEPGTGEAPW 561

Query: 277 KISDGNVRISR--YKLQSILPNSSTDEDNKT------KVSQDEENLLNFSE 319
                   I       +    NS    D +        VS D +  L  S 
Sbjct: 562 AFDLKRFAIEDAGLHFRDQSANSPVALDIENANLEVKDVSLDTKRALPVSL 612


>gi|300937359|ref|ZP_07152195.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 21-1]
 gi|300457578|gb|EFK21071.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS 21-1]
          Length = 1263

 Score = 59.9 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G  N     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTLSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|124025356|ref|YP_001014472.1| hypothetical protein NATL1_06451 [Prochlorococcus marinus str.
           NATL1A]
 gi|123960424|gb|ABM75207.1| conserved hypothetical [Prochlorococcus marinus str. NATL1A]
          Length = 1319

 Score = 59.9 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 88/297 (29%), Gaps = 14/297 (4%)

Query: 7   IGLGFLFSVV--LVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
            GL   F+ +  ++      L +D   + F    E+  +  +G  + +     +      
Sbjct: 13  WGLAGTFAALGGVLIWSGADLLVDRTISRFSPQIEKTLSNSLGHPLKIGSYRGLRPW--- 69

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            V     R+      S    I  L+++      L     V         +    +  G  
Sbjct: 70  GVELGPTRLLPGIKDSSSVNISNLTIKFAPFASLLNWKPVAIFNPKGTEIILNKNDTGSF 129

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
            W   +       N+ L+    +  +I      +     L+  NL ++     I   +++
Sbjct: 130 -WVVPQKDNPKQINLQLKFNLKEPTKIVF---NAGDTTLLAKGNLSLNLGEKKIFGAINL 185

Query: 183 DSI-KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
           +S  +GS+   G G +D      K+  N  + +    +            I+    L   
Sbjct: 186 ESKEQGSLYLSGKGYWDGIEFQTKVKINKLSLSIFERILGNNSNFIAEGNINGSLKLGVK 245

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
           +     +G   +     K   L  +   +  +   +     +++          + S
Sbjct: 246 KGLIRCNGGLLLNNLTLKGGPLSDTLSTN--NSKIECDKNKLKLIDSNWNYGYWDIS 300


>gi|195939443|ref|ZP_03084825.1| hypothetical protein EscherichcoliO157_24033 [Escherichia coli
           O157:H7 str. EC4024]
 gi|261228250|ref|ZP_05942531.1| conserved membrane protein, predicted transporter [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261255106|ref|ZP_05947639.1| conserved membrane protein, predicted transporter [Escherichia coli
           O157:H7 str. FRIK966]
 gi|320640037|gb|EFX09618.1| hypothetical protein ECO5101_00478 [Escherichia coli O157:H7 str.
           G5101]
 gi|320645607|gb|EFX14616.1| hypothetical protein ECO9389_08277 [Escherichia coli O157:H- str.
           493-89]
 gi|320650917|gb|EFX19374.1| hypothetical protein ECO2687_14529 [Escherichia coli O157:H- str. H
           2687]
 gi|320656298|gb|EFX24210.1| hypothetical protein ECO7815_19119 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661988|gb|EFX29396.1| hypothetical protein ECO5905_12963 [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320666822|gb|EFX33801.1| hypothetical protein ECOSU61_06815 [Escherichia coli O157:H7 str.
           LSU-61]
          Length = 1263

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G S+     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|331654843|ref|ZP_08355843.1| conserved hypothetical protein [Escherichia coli M718]
 gi|331048225|gb|EGI20302.1| conserved hypothetical protein [Escherichia coli M718]
          Length = 1266

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 32/322 (9%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G S+     S +  +     +   ++   +  +     +       L+ LN
Sbjct: 115 FRTNTPITSGGSDDSLEASHISELFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK 304
            + S       +P++    D K
Sbjct: 295 WQFS-------IPDTRITMDGK 309


>gi|320106397|ref|YP_004181987.1| hypothetical protein AciPR4_1165 [Terriglobus saanensis SP1PR4]
 gi|319924918|gb|ADV81993.1| protein of unknown function DUF490 [Terriglobus saanensis SP1PR4]
          Length = 1453

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 87/288 (30%), Gaps = 22/288 (7%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWT-DFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
            +L  L  LF +++ G        D+         +      G K+ +    +  +    
Sbjct: 27  WILGSLFVLFLLIVGGLAWYSTTSDFDRRVSAILVKTLEDATGGKVDLA-HTRFSL-RHL 84

Query: 63  SVFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGE--------IRVFDMYIDQPHL 112
           +V    + I   +  D +    ++ + +R      L           I +  + ++QPH+
Sbjct: 85  AVEADGLVIHGLEGPDQAPYIAVDKILLRVTIKNFLWHAAGKGAIKYISLDMLRVEQPHI 144

Query: 113 NFYLSSKGVSNWFQRKSTM-------DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
           +  ++  G +N  + K+         D + ++    + +  G + + D+         DL
Sbjct: 145 HLIVNKDGTTNQPEPKTKSTSNEPVLDTLLDLQAHTVELVNGVVLMNDRAIPFDLAARDL 204

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
            + +     +    LS+         +        R   +          + SL +    
Sbjct: 205 GVSLRYLPKSDHYGLSVGISDLRTKMQ-QEPEAKSRLQLEAELGRKLIELS-SLTLDTGK 262

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS 273
            ++ ++     N      +    G   +           L   +  L+
Sbjct: 263 DSHLLVSGKIENFDNPAWEAGIKGDIEIPQISVLSGFPGLKGGRVNLN 310


>gi|293449570|ref|ZP_06663991.1| hypothetical protein ECCG_02604 [Escherichia coli B088]
 gi|291322660|gb|EFE62089.1| hypothetical protein ECCG_02604 [Escherichia coli B088]
          Length = 1263

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G S+     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|72381865|ref|YP_291220.1| hypothetical protein PMN2A_0025 [Prochlorococcus marinus str.
           NATL2A]
 gi|72001715|gb|AAZ57517.1| conserved hypothetical protein [Prochlorococcus marinus str.
           NATL2A]
          Length = 1319

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 94/297 (31%), Gaps = 14/297 (4%)

Query: 7   IGLGFLFSVV--LVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
            GL   F+ +  ++      L +D   + F    E+  +  +G  + +     +      
Sbjct: 13  WGLAGTFAALGGVLIWSGADLLVDRTISRFSPQIEKTLSNSLGHPLKIGSYRGLRPW--- 69

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            V     R+      S    I  L+++      L     V         +    +  G  
Sbjct: 70  GVELGPTRLLPGIKDSSSVNISNLTIKFAPFASLLNWKPVAIFNPKGTEIILNKNDTGSF 129

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
            W   +       N+ L+    +  +I      +     L+  NL ++     I   +++
Sbjct: 130 -WVVPQKDNPKQINLQLKFNLKEPTKIVF---NAGDTTLLAKGNLSLNLGEKKIFGAINL 185

Query: 183 DSI-KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
           +S  +GS+   G G +D      K+  N  + +     +I      +    ++ G+L   
Sbjct: 186 ESKEQGSLYLSGKGYWDGIEFQTKVKINKLSLSIFE--RILGNNSNFIARGNINGSLKLG 243

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
            K+ +      +  +   L+   LS   S  +   +     +++          + S
Sbjct: 244 VKKGLIRCNGGLLLNNLTLMGGPLSDTLSTNNSKIECDKNKLKLIDSNWNYGYWDIS 300


>gi|330807540|ref|YP_004352002.1| hypothetical protein PSEBR_a832 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375648|gb|AEA66998.1| Conserved hypothetical protein; putative exported protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 1267

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/254 (11%), Positives = 79/254 (31%), Gaps = 20/254 (7%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHIL-PFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
           +R + E +A+  +G  + + G +        P +  +D+ + +   G     ++ +    
Sbjct: 43  YRAEVETRASAALGMPVHI-GSLDGSWSALAPILAARDVVVGE---GPNALHLDQVRAVP 98

Query: 91  EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI--LEKIHVKGG 147
           +    LL+ ++R+  + +    ++    + G           D   +    LE++ V   
Sbjct: 99  DLWDSLLARQVRIAHLEVSGLKISLKEGADGKWALEGLPVKDDQPLDPQQLLERMQVV-S 157

Query: 148 RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKI 206
           +  ++D +         L              LS+ +       +      D +  A  +
Sbjct: 158 KFSLLDSQVT-------LQPVEQPPLTLTYVGLSLRTGATRQRLDVRLTLPDGQPVAINL 210

Query: 207 TA---NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL 263
                    KN      + L    +   +       WN  +    G F ++     + + 
Sbjct: 211 RTRIRASDWKNGQADAYLSLPQSDWSKWLPKRLTQQWNFSRIKAGGEFWLSWGDGTVQSA 270

Query: 264 ELSAKKSRLSGNFK 277
            +      + G + 
Sbjct: 271 AMRLNAPDILGAYA 284


>gi|121602992|ref|YP_980321.1| hypothetical protein Pnap_0074 [Polaromonas naphthalenivorans CJ2]
 gi|120591961|gb|ABM35400.1| conserved hypothetical protein [Polaromonas naphthalenivorans CJ2]
          Length = 433

 Score = 59.5 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/284 (12%), Positives = 77/284 (27%), Gaps = 11/284 (3%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89
            +       +    +G  + V G +   + P P+V  +++   Q +      +I+ L+  
Sbjct: 33  EELAARASAELEAALGVPVRV-GALHWRLRPTPTVVIEEVATGQPQP----IEIKRLTAH 87

Query: 90  AEFLPLLSGEIRVFDMYIDQPHL-NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR 148
                L    ++V    +    L    L   G                  +    ++ G 
Sbjct: 88  LNTSALWQRRMKVDLAVVQGAVLPQLSLRGLGRKPAAAEAGPAREFTLDEVPMARIEFGD 147

Query: 149 IKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208
           +  I +   +V +  + +   + R           S    +     G  D       I  
Sbjct: 148 VTWISRHGIRVVYEGEADFDAAWRPRTARLRRPQTSPPADLALARKGQDDRWEVRSHIGG 207

Query: 209 NFPAKNKAI----SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE 264
                   +       ++L     P  I++   L    ++ I +G  S            
Sbjct: 208 GTADGELLLHTSGQGGLRLTGQLQPRHIEVASALQAFNRRAIIAGKAS-GETTLSASGAT 266

Query: 265 LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308
                  L      S G   + R+ L   + +       +T + 
Sbjct: 267 AGELARSLHTTTSFSMGRSTLLRFDLDKAIRSLGQAHAGQTPLD 310


>gi|258405411|ref|YP_003198153.1| hypothetical protein Dret_1287 [Desulfohalobium retbaense DSM 5692]
 gi|257797638|gb|ACV68575.1| protein of unknown function DUF748 [Desulfohalobium retbaense DSM
           5692]
          Length = 1080

 Score = 59.5 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 80/311 (25%), Gaps = 36/311 (11%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81
             P  +D    R      A   VG + + +       +   ++   +  + + E G    
Sbjct: 127 GAPFTLDLNGMR------AATRVGLERSSEPDSSWMPVVNATLAISECTLSEPEHG-TVV 179

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-----------FQRKST 130
            +   ++  E    L     V  + +  P         G  NW                 
Sbjct: 180 SLASGAVELERFAPLEKTATVNAISLQAPFAKVVRRGDGNLNWAGYFVASASANATAPDP 239

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS-DLNLQISARFLNIISPLSIDSIK--- 186
                   L    V  G  +  D+           LN  +S       SP S  +     
Sbjct: 240 PSSPFAFSLASFTVANGIARFEDRSVASTIEKRVALNATLSDLSTTASSPASFQARARTK 299

Query: 187 --GSVIAEGTGNFDNKRSAFKITANFPAKNKAI-------SLKIQLFPLAYPIIIDLFGN 237
              ++  +G        +    +  F   +          +L  +L              
Sbjct: 300 AGETIEVKGDLRLAPALAT-NGSLAFDGVSLPHYGPYYQPALPFELASGQVQGRTTFRFA 358

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSA----KKSRLSGNFKISDGNVRISRYKLQSI 293
              +E+  +     +++G   +   L        + +  +G  ++    V I+   LQ  
Sbjct: 359 PESDEQLHLAGSDLAISGLSLRDPQLGTELFSLPQANVTNGTVRLDGQAVHIAAVDLQGG 418

Query: 294 LPNSSTDEDNK 304
             +     D +
Sbjct: 419 KVHLQRHADGQ 429



 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/361 (8%), Positives = 97/361 (26%), Gaps = 62/361 (17%)

Query: 49  AVKGGIKIHILP---------FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE 99
            V+G       P            +    + +   + G+    +   ++    + L    
Sbjct: 348 QVQGRTTFRFAPESDEQLHLAGSDLAISGLSLRDPQLGTELFSLPQANVTNGTVRLDGQA 407

Query: 100 IRVFDMYIDQPHLNFYLSSKGVSNWFQR----------------------KSTMDMIHNV 137
           + +  + +    ++    + G  +  +                       K+       V
Sbjct: 408 VHIAAVDLQGGKVHLQRHADGQLHLMRLLGEVGSQKASTATSAHAGAGRDKADASPAWRV 467

Query: 138 ILEKIHVKGGRIKIIDQESDQ--VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195
            +++  +    ++  D+ + +     +SD++L +      + +PL + ++ GS+   G  
Sbjct: 468 RVQESTLADWTVRWQDEAAPRPDALTVSDIDLALRHIDSALATPLEL-ALSGSLNTGGNL 526

Query: 196 NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255
             D       +T         + ++     +   + + L             +G + +  
Sbjct: 527 TLDGNLDPKTLTGTGSFALNDLDIRAGRMYVPGSMQLSLR------RGVVDGTGTWKLR- 579

Query: 256 DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDE---- 311
                          +LSG+  + +          ++            T+++ +     
Sbjct: 580 --------PGDGIAPQLSGDLALKE---------FEAGASGDPDTLLGVTRLACNGFSVA 622

Query: 312 ENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQE 371
                 +    + +    +           +     +   + +  +      S     QE
Sbjct: 623 LPEQAITIRKVQLVEPYADLKVNANGRLNLRTVFSGEPAHETNATRSATPRASDTSAPQE 682

Query: 372 N 372
           N
Sbjct: 683 N 683


>gi|291461028|ref|ZP_06026519.2| UbiD family decarboxylase [Fusobacterium periodonticum ATCC 33693]
 gi|291379376|gb|EFE86894.1| UbiD family decarboxylase [Fusobacterium periodonticum ATCC 33693]
          Length = 1502

 Score = 59.5 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 45/378 (11%), Positives = 133/378 (35%), Gaps = 23/378 (6%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIR 70
               +++     + + +  ++  +  E+ ++  +  ++ ++  I +          K+I 
Sbjct: 23  ISIPLIVATVLGLIITVALSNLEKIVEKVSSRYINGRVHIE-DINLSFSEP---VIKNIT 78

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
           +   E+ +     + +  +  F  LLSG I   ++ +D   +N      GV N+ +    
Sbjct: 79  LYDNEN-NVMFNSDKVMAKISFKNLLSGRI--DELNVDSASVNVVRDKDGVINFTKLSKK 135

Query: 131 MDMIHNVI-LEKIHVKGGRIKIIDQESDQVYF--LSDLNLQISARFLNIISPLSIDSIKG 187
                    ++K+ +   RI   D          + +++  + A    ++    I     
Sbjct: 136 KSDKKPSNPIDKLVLTSARINYEDYSFLDKLEKKIENIDATVIADKEKLVKNADISITDE 195

Query: 188 SVIAEGTGNFDNKR----SAFKITANFPAKNKAISLKIQLFPLAYPII-IDLFGNLFWNE 242
           ++    T   ++ +       K+  +    +K +   +           I++  +L    
Sbjct: 196 NIKLNTTFKDESNKELSSLEMKLKIDKFLLDKDLLKSLAKNNEKLEFSDINISSDLLIKT 255

Query: 243 KQPIYS----GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG--NVRISRYKLQSILPN 296
            + + +    G   V     +  +++   K  +L+G F   DG   + ++ +     +  
Sbjct: 256 DKTVKNTNIVGNLDVESPLFRYADVDSDIKNIKLAGVFDGRDGEAKLDLNVFDKDRNITV 315

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356
           +  DE+  + ++ D+ +    ++        L+  +   E+ K   +   ++  I  +  
Sbjct: 316 TYQDEELNSVINIDKIDESILNKIKPIRDKKLDLKNINIEDIKTVVHYSDERGLIVKTTM 375

Query: 357 KKEEKDNSHDKENQENFS 374
           K    D+        +F+
Sbjct: 376 KTN--DSEFKGIELNDFN 391


>gi|218248931|ref|YP_002374302.1| hypothetical protein PCC8801_4219 [Cyanothece sp. PCC 8801]
 gi|218169409|gb|ACK68146.1| protein of unknown function DUF490 [Cyanothece sp. PCC 8801]
          Length = 1846

 Score = 59.5 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/290 (8%), Positives = 76/290 (26%), Gaps = 10/290 (3%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE 84
            F          E Q +  + + + +     +       V F    I        +  + 
Sbjct: 53  WFFLQRQLTPLVEDQLSNFLNRPVKLG---SVQYFSLNRVRFGSSEILTTATDPAQVSMV 109

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV 144
           GL +  + + L+  +     +    P++      +G     +  +       + L+ +  
Sbjct: 110 GLEVDYDPIKLILTQKLEIGITAIDPNVYLKQGKQGNWILTEFDAVKPNNP-IKLKSLRF 168

Query: 145 KGGR-IKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203
           +  + + + +  + Q+                         + G +++EG        + 
Sbjct: 169 RNAQGLLLANSATGQIPEPVKFEKLSGQTDFINNRENIKFKVDGQLVSEGKFKVSGVANP 228

Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIII---DLFGNLFWNEKQPIYSGVFSVAGDFSKL 260
                    +   + +      +  P+      L  NL    +      +  VA      
Sbjct: 229 KTQETKLLVQGNRLGVTEVDHLIDLPLDFQAGKLDANLEVTLRSQQLPLLQGVANLEQVT 288

Query: 261 LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD 310
             ++      +  G  +     +   +   +    +     + K  + + 
Sbjct: 289 AKIDNFPHVLQTQGTLRFQGTAIYFDKVGTRFGAIDG--ITEGKLDLKKG 336


>gi|148977846|ref|ZP_01814401.1| hypothetical protein VSWAT3_10008 [Vibrionales bacterium SWAT-3]
 gi|145962915|gb|EDK28186.1| hypothetical protein VSWAT3_10008 [Vibrionales bacterium SWAT-3]
          Length = 1290

 Score = 59.5 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/351 (8%), Positives = 96/351 (27%), Gaps = 30/351 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTV-PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           +LR  L  +  L   + +   T+     +   ++ + E       G + +++        
Sbjct: 8   ILRACLWLVVTLLVTLAIAVTTLRVALPNLNKYQSEIELWVNQHSGFEFSIQDVGGFWRN 67

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSS 118
             PS+  + ++            +E + +  + +  L      V D+ ++Q +L+     
Sbjct: 68  THPSIALQGVKASLPNAEDVTFSVERVEVEFDLIQSLVQMRPVVADLVMNQMYLDIRSID 127

Query: 119 --KGVSNWFQRKSTMDMIHNVI---------LEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
              G +   + K +      +          L  +  K   I      SD+   L    L
Sbjct: 128 LFAGQNETDKPKDSGSSKRVMNELDNLLLKTLVDVTAKDSTILYR-AVSDEERQLDIETL 186

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
           +      + ++   +             N ++   +          +      +    ++
Sbjct: 187 KWQNSGKHHLAEGVVSIK--------DANLNSLSVSANFIDGGSLTDVTGEFYVSADNIS 238

Query: 228 YPIIID--LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
               +   +             +   ++         +E+   +   + + K     + +
Sbjct: 239 IKPWLTRYMQAESGIETGTVSLNSWLTLRNSKPVSAYVEVLPSELTWNEDGKHD---LML 295

Query: 286 SRYKLQSILPNSSTDEDN---KTKVSQDEENLLNFSENGAESMHDLNETDF 333
                +    +     +      +        L+ +    +    LN ++ 
Sbjct: 296 ESGVFKLSPIDDGWQVNGHSLNLRTDDMPWPELDVAFKWQQGPWQLNVSEL 346


>gi|312130973|ref|YP_003998313.1| hypothetical protein Lbys_2283 [Leadbetterella byssophila DSM
           17132]
 gi|311907519|gb|ADQ17960.1| protein of unknown function DUF490 [Leadbetterella byssophila DSM
           17132]
          Length = 1594

 Score = 59.5 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/322 (10%), Positives = 90/322 (27%), Gaps = 21/322 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWT----DFREDFERQATLIVGKKIAVKGGIKIH 57
           +R+ L   G    V+L     + L+ + T       +      +  +G    ++G +   
Sbjct: 6   IRKTLKVFGISILVILGAMVAILLYFNSTPGQKKLSDLIFNGLSKKIGTP--IEGRLSFS 63

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
           +  +  V    + I    +       +   +    + LL  E+ +  + ++   +     
Sbjct: 64  LPDW--VQLDQLLIRDLSN-DTLVYAQRAHLDVALMKLLHNELYIEQVELENAVVKLKK- 119

Query: 118 SKGVSNWFQ----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
                N+             K T      + L  + +K  ++   DQ+S Q + +    L
Sbjct: 120 KDEAFNFDFILNAFASEPTPKDTNSSSLKINLTGVDLKSIKVDYDDQDSGQRFLVHLGLL 179

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
                 L++                  G+   + S    ++      +  ++  +     
Sbjct: 180 NTGFDVLDLEKSRFDLKPLLVENLYVQGSL-GQSSTDTSSSGVLPDIRLKTIDAKNLNWN 238

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
           + +   L                        K LN    A         ++  G +  S 
Sbjct: 239 FDLGEQLTKGQNVALHLEPKDINLPQLEVDVKALNAGFDAISFAQKNPQRVPQGEINYSD 298

Query: 288 YKLQSILPNSSTDEDNKTKVSQ 309
            +L     +      ++  ++ 
Sbjct: 299 LELTKGSIDLENVVYSEGNLAL 320


>gi|182414079|ref|YP_001819145.1| hypothetical protein Oter_2262 [Opitutus terrae PB90-1]
 gi|177841293|gb|ACB75545.1| conserved hypothetical protein [Opitutus terrae PB90-1]
          Length = 413

 Score = 59.5 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 77/249 (30%), Gaps = 16/249 (6%)

Query: 16  VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE 75
           +L     +P  +     R     +   I G    V   I I +    +   + + I +  
Sbjct: 30  LLAVRIALPYVV-----RNQVNHRLQSIPGYTGHVA-DIGIALWRG-AYALEGVEIYKVS 82

Query: 76  DG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM-- 131
               +   +   +     +  L  G+I   D+ +++  L F   +    +          
Sbjct: 83  GEVRTPFVRARTIDFSVAWRDLFHGKIV-SDILVEEGQLTFVAGATEAESQTDVDRRWQE 141

Query: 132 --DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189
             + +  + +  + V  G ++  D        L   NL+++A  L      S +     +
Sbjct: 142 VIEDLFPLEITHLEVNHGLLRYQDTTKTPAVDLFVTNLRLAATGLRNRPSESGEEFPAEI 201

Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP-IIIDLFGNLFWNEKQPIYS 248
           + EG  +    +    I+A   A      L  +L  +  P +   L      +  +    
Sbjct: 202 VLEGD-SLGGGQLRLAISAEPLAAQPHFHLSAKLENVNLPELNESLKAYANVDVSRGKME 260

Query: 249 GVFSVAGDF 257
               +AG  
Sbjct: 261 LAAEMAGKD 269


>gi|213622241|ref|ZP_03375024.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 446

 Score = 59.5 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/205 (10%), Positives = 56/205 (27%), Gaps = 41/205 (20%)

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
           +        D   +  +  + V  G + +   E+D    + D+ L +     +  +    
Sbjct: 22  DNTLPDVAEDRGWSFDIRSLRVA-GSVLVFQHENDDQVTVRDIRLNMEQDAEHRGT---- 76

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242
                                F    N   ++ A+S    +    YP           N 
Sbjct: 77  -------------------FDFSGRVNRDQRDLALSFSGTVDASDYP----------HNL 107

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
              I    + + G       +E    + +L   ++ +   +  +   L +    + +   
Sbjct: 108 TAGIEQLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA----NDSSLT 160

Query: 303 NKTKVSQDEENLLNFSENGAESMHD 327
              +V+  E+         ++   D
Sbjct: 161 GHVQVTLAEQPEWQIDLRSSKLNLD 185


>gi|332998366|gb|EGK17965.1| hypothetical protein SFVA6_4169 [Shigella flexneri VA-6]
          Length = 1266

 Score = 59.5 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/342 (11%), Positives = 94/342 (27%), Gaps = 36/342 (10%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLN 166
                  + G S+     S +  +     +   ++   +  +             L+ LN
Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQSAELAIPQLTWLN 174

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQL 223
                R   ++S  S+    G +        D    S  ++       +    L   +Q 
Sbjct: 175 DPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQD 234

Query: 224 FPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                     L G +  ++             G          +     L+ +    +  
Sbjct: 235 NIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPG 294

Query: 283 VRISRYKLQSILPNSSTDEDNK----TKVSQDEENLLNFSEN 320
            + S       +P++    D K      ++       +    
Sbjct: 295 WQFS-------IPDTRITMDGKPWPSGALTLAWIPEQDVDGK 329


>gi|83310887|ref|YP_421151.1| hypothetical protein amb1788 [Magnetospirillum magneticum AMB-1]
 gi|82945728|dbj|BAE50592.1| Uncharacterized protein involved in outer membrane biogenesis
           [Magnetospirillum magneticum AMB-1]
          Length = 845

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 81/317 (25%), Gaps = 72/317 (22%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGL 86
           +D   +R   E +A+ ++ +K+ V G I + ILP P+V    + +D        + ++ +
Sbjct: 1   MDGEAWRGRIEAEASALLRRKVTVAGPIALRILPSPAVTLASVAVDGT------AALDRV 54

Query: 87  SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG 146
            +      LL+G   + D+ I+                                      
Sbjct: 55  RVGLSLGALLAGRPELTDLVIEG------------------------------------- 77

Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKI 206
                      +   L  LNL+ +                     E  G           
Sbjct: 78  ----------GRAGPLDGLNLRATMTGETFAVRGEAKLWGRPATLEAQGR---------- 117

Query: 207 TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS 266
               P+      LK ++   +        G     +         S+A       + +L 
Sbjct: 118 ---RPSGEAMAPLKAKVAQPSLESEASFEGTFG--KSGVTGKIDLSLASLSRAAGSDQLP 172

Query: 267 AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
                     ++S   V IS       +    +        S     L++ +        
Sbjct: 173 DAPLSAQAELRLSPDEVVISDL----GIILGESTITGSVVASLTAPALMDITLRADSFDL 228

Query: 327 DLNETDFFEEEEKKNKN 343
           D        +   + + 
Sbjct: 229 DTRRPAATAQAPTQPQK 245



 Score = 41.0 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 69/229 (30%), Gaps = 14/229 (6%)

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSDLN--LQISARFLNII 177
                Q  + +    +V L    V   GR +       +   L +L   L+I +    I 
Sbjct: 307 RLTLSQASARLPGAGSVKLTGAMVTPEGRPRFDGTLKAESRNLPELRKWLRIGSAATPIR 366

Query: 178 SPLSIDSIKGSVIAEGTG---NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
             L                  + D +R    I+A        I LK +L      +  D 
Sbjct: 367 GKLESKVQVTDSRLSLNALTLDLDERRITGMISAGLAQ---PIPLKAELGLPGLALGFDG 423

Query: 235 F-GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
             G+        + +  F+ A              +  +S   + S+G + +S  + ++ 
Sbjct: 424 TLGDGRLEGGASLRAAGFAQAIRALAPGYRPRGNGELAVSARVEGSEGRITLSELQAKAG 483

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342
                     K  +S +    L  S +G     D        ++ +++K
Sbjct: 484 DA----LVTGKASLSLEASPKLTASLSGNAIALDPFLPAEASDKAEESK 528


>gi|87303290|ref|ZP_01086083.1| hypothetical protein WH5701_12568 [Synechococcus sp. WH 5701]
 gi|87282185|gb|EAQ74146.1| hypothetical protein WH5701_12568 [Synechococcus sp. WH 5701]
          Length = 1522

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 87/305 (28%), Gaps = 20/305 (6%)

Query: 29  WTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSM 88
           +  +R   +      +G  + +     +       +     R+          +++G+ +
Sbjct: 47  YESWRPRLQVLIGRGLGHPVQLGPYEGLRPW---GLTIGPSRVLSGPADRSNLRLDGVGV 103

Query: 89  RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR 148
             + L  L+    V D+      LN   +++G   W    +       + L  +  K  R
Sbjct: 104 NLDPLASLAERALVLDLRPRGAQLNLIPNARGQL-WVFGPAGAKQPPRLTLNLLLEKPAR 162

Query: 149 IKIIDQESDQVYFLS-DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS--AFK 205
           +++     D        + L   +      +     +  G+  + G        +  +  
Sbjct: 163 LQLGSSALDLKVQGRAGVRLHRRSIDWRATARPRAQATAGAASSNGRALVRGSANWSSGA 222

Query: 206 ITANFPAKNKAISLKIQLFPLAYPIIID-----LFGNLFWNEKQPIYS--GVFSVAGDFS 258
           +      +   ++    L P A P  +        G L         S  G   +     
Sbjct: 223 VKVGLDLRRWDLAPLASLIPRARPPRLQSLKGTADGRLQLTRGSGSTSCRGSLRLGELEL 282

Query: 259 KLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFS 318
           +   L    +  RL+   +     ++   +++      ++     +  +       L  +
Sbjct: 283 RDPLLPAPLQARRLAVACRGQQILLKGDPWQM------ANWRGTVRGSLEPGNRFDLRLT 336

Query: 319 ENGAE 323
            +  +
Sbjct: 337 ASDPQ 341


>gi|297519111|ref|ZP_06937497.1| hypothetical protein EcolOP_15833 [Escherichia coli OP50]
          Length = 419

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLCIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G S+     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMGLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|115374328|ref|ZP_01461612.1| hypothetical protein STIAU_3763 [Stigmatella aurantiaca DW4/3-1]
 gi|310818997|ref|YP_003951355.1| hypothetical protein STAUR_1724 [Stigmatella aurantiaca DW4/3-1]
 gi|115368638|gb|EAU67589.1| hypothetical protein STIAU_3763 [Stigmatella aurantiaca DW4/3-1]
 gi|309392069|gb|ADO69528.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 563

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/347 (10%), Positives = 100/347 (28%), Gaps = 41/347 (11%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR +L GLG L  + L+    +                         ++       ++P 
Sbjct: 17  LRPLLWGLGALIVLELLYNSVLVT--------GLLATFLNRATHGHPSISWSRAWSLVPG 68

Query: 62  PSVFFKDIRIDQKEDGSFE--SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-LSS 118
             V+ +++++ Q+++        +E +++    + LL   +    + I   H+      +
Sbjct: 69  -DVYVRNLKLRQEDERGGFWQLDLEDVTVDLSLVSLLRRRLEAESLDIRGLHVRISPAPA 127

Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
           +   +   +         V+L  + +               + + +LN +         +
Sbjct: 128 EPEEDTSPKSLPSPDPWQVLLYGVRI---------------HEVRELNWKEVQLTGIQEA 172

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
             S++ + G  ++           A ++     A+ +  S    +  L            
Sbjct: 173 SGSLELVPGHRVSAQNVQVRLGPGALRVQGETVARVEQGSAGFVIEALRQEPQGGFDLTG 232

Query: 239 FWNEKQPIYSGVF----SVAGDFSKLLNLELSAKKSRLSGNFKISDGNV--------RIS 286
              E    ++        +    S++ ++ L      L  + ++ +G +          S
Sbjct: 233 GMKEGHLRFTAALPALEELKPLLSRITDVRLRGGAGSLEADVQVKEGRLAPGTVLKGAGS 292

Query: 287 RYKLQSILP--NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331
              L S      +           +  E         A    +  ET
Sbjct: 293 PVTLSSGPMHVTAPWKLLADAYPREGGETRFGLKLTLAPVRMEAGET 339


>gi|257061991|ref|YP_003139879.1| hypothetical protein Cyan8802_4258 [Cyanothece sp. PCC 8802]
 gi|256592157|gb|ACV03044.1| protein of unknown function DUF490 [Cyanothece sp. PCC 8802]
          Length = 1846

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/290 (8%), Positives = 76/290 (26%), Gaps = 10/290 (3%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE 84
            F          E Q +  + + + +     +       V F    I        +  + 
Sbjct: 53  WFFLQRQLTPLVEDQLSNFLNRPVKLG---SVQYFSLNRVRFGSSEILTTATDPGQVSMV 109

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV 144
           GL +  + + L+  +     +    P++      +G     +  +       + L+ +  
Sbjct: 110 GLEVDYDPIKLILTQKLEIGITAIDPNVYLKQGKQGNWILTEFDAVKPNNP-IKLKSLRF 168

Query: 145 KGGR-IKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA 203
           +  + + + +  + Q+                         + G +++EG        + 
Sbjct: 169 RNAQGLLLANSATGQIPEPVKFEKLSGQTDFINNRENIKFKVDGQLVSEGKFKVSGVANP 228

Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIII---DLFGNLFWNEKQPIYSGVFSVAGDFSKL 260
                    +   + +      +  P+      L  NL    +      +  VA      
Sbjct: 229 KTQETKLLVQGNRLGVTEVDHLIDLPLDFQAGKLDANLEVTLRSQQLPLLQGVANLEQVT 288

Query: 261 LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD 310
             ++      +  G  +     +   +   +    +     + K  + + 
Sbjct: 289 AKIDNFPHVLQTQGTLRFQGTAIYFDKVGTRFGAIDG--ITEGKLDLKKG 336


>gi|323970339|gb|EGB65609.1| hypothetical protein ERHG_03613 [Escherichia coli TA007]
          Length = 1263

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G S+     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|326314954|ref|YP_004232626.1| hypothetical protein Acav_0133 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323371790|gb|ADX44059.1| hypothetical protein Acav_0133 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 458

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/319 (13%), Positives = 108/319 (33%), Gaps = 24/319 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKKIAVKGGIKIHILP 60
           LR  L G+     +VL     +  ++   +         A  ++G  + V   ++ H+LP
Sbjct: 24  LRWTLGGVAVAGVIVLAAGAALWWWLPSDEELARRAGDGAGDLLGVPVVVD-RLEWHLLP 82

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ---PHLNFYLS 117
            P +    +  +Q+         + +   A +  LL   + +  + ++    P L+    
Sbjct: 83  SPRLVLHGVHTEQEAP----VSADRIVADARWSDLLRLRLALARLRLEGAAVPQLSLSQF 138

Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGR---IKIIDQESDQVYFLSDLNLQISARFL 174
                     +          L ++ V+      ++ I ++   + +   ++   + R  
Sbjct: 139 K----VRDAGQDGPASFGPFTLAEVPVERAEWQGVRWIGRQGRDLAYGGSVDFGAAWRPA 194

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
           + +      S    +  E  G+ D  R    +TA    +   + L+           +D 
Sbjct: 195 HGLLEREGASPPARLAIEREGSED--RWRADVTAGGRTERGELRLQEFGERYRVTGSLDF 252

Query: 235 F-----GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
                 G +   E++ I SG  S           + +A    L      +    ++  + 
Sbjct: 253 SGVDVVGVMDAFERRSIVSGQAS-GHTDLIAEGDDPAAAMRALQTRTSFTVARAKLLTFD 311

Query: 290 LQSILPNSSTDEDNKTKVS 308
           L++ + ++ +D+   T++ 
Sbjct: 312 LEAAIRSAGSDKGGTTQLD 330


>gi|300928721|ref|ZP_07144239.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           187-1]
 gi|300463310|gb|EFK26803.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           187-1]
          Length = 1263

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G S+     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|149189083|ref|ZP_01867371.1| predicted membrane protein [Vibrio shilonii AK1]
 gi|148837046|gb|EDL53995.1| predicted membrane protein [Vibrio shilonii AK1]
          Length = 1297

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/325 (12%), Positives = 97/325 (29%), Gaps = 32/325 (9%)

Query: 15  VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQK 74
            V V    +P        + +         G  I++K          PS+  + + +   
Sbjct: 26  AVTVLRVGLPQL---NKIQPEIVTWVNQGTGLNISLKDVRGFWRNTHPSISLQGVVVGLP 82

Query: 75  EDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFY--------------LSSK 119
           E    + ++  L +  + +  ++  +  + DM I+   L+                   +
Sbjct: 83  ESPETKFEVGNLELEFDLIQTIIQRQPVLADMVINDMMLDIRSVDLLKATEPKTVSQPKQ 142

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
             ++  Q  + +D +    L++  V    +      S +   L   NLQ   +    ++ 
Sbjct: 143 PAASGEQLVNRLDNLLLRQLDRFAVANSTVLY-QSISGEERQLDIENLQWRNQKARHLAQ 201

Query: 180 LSIDSIKGSVI-AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
            +I     ++   E   +F +K S   ++ +F      +SL   L            G +
Sbjct: 202 GTISIADANLNSLEVRADFIDKGSLSNVSGDFYVAVDQMSLSPWLSETQKQQTGIKDGEV 261

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
                          +      L +  S       G     D ++ +    +  +  ++ 
Sbjct: 262 SL-----RSWITLDNSTAKEAYLEVLPSELSWSKDGK----DHDLFVESAVMHLLPSDAG 312

Query: 299 TDE---DNKTKVSQDEENLLNFSEN 320
                 + K + +      L+ +  
Sbjct: 313 WQLNVHEVKARTNDVPWPELDIAAE 337


>gi|84394051|ref|ZP_00992788.1| hypothetical protein V12B01_10442 [Vibrio splendidus 12B01]
 gi|84375337|gb|EAP92247.1| hypothetical protein V12B01_10442 [Vibrio splendidus 12B01]
          Length = 1289

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/329 (8%), Positives = 85/329 (25%), Gaps = 29/329 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTV-PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           +LR  L  +  L   + +   T+     +   ++ + E       G   +++        
Sbjct: 8   ILRACLWLVVTLLVTLAIAVTTLRVALPNLNKYQSEIELWVNQHSGFDFSIQDVGGFWRN 67

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSS 118
             PSV  + ++            +E + +  + +  L      V D+ ++Q +L+     
Sbjct: 68  THPSVALQGVKASLPNAEDVTFSVERVEVEFDLIQSLVQMRPVVADLVMNQMYLDIRSID 127

Query: 119 KGVSNWFQRKSTMDMIHNV----------ILEKIHVKGGRIKIIDQES-DQVYFLSDLNL 167
               N             V           L  +  K   +        D+   +  L  
Sbjct: 128 LFAGNGTDEPKDPGSSKRVMKELDNLLLKTLVDVTAKDSSLLYRSVSGEDRQLDIDILKW 187

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
           Q + +       +SI             N ++   +          +      +    ++
Sbjct: 188 QNTDKHHLAEGVVSIK----------DANLNSLSVSANFIDGGSLTDVTGEFYVSADNIS 237

Query: 228 YPIIID--LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
               +   +             +   ++         +E+   +   + + +     + +
Sbjct: 238 VKPWLTRYMQAESGVETGTVSLNSWLTLRNSKPVSAYVEVLPSELTWNEDGQHD---LML 294

Query: 286 SRYKLQSILPNSSTDEDN-KTKVSQDEEN 313
                +    +     +     +  D+  
Sbjct: 295 ESGVFKLSPIDDGWQVNGHSLNLRTDDRP 323


>gi|325860100|ref|ZP_08173226.1| hypothetical protein HMPREF9303_1082 [Prevotella denticola CRIS
           18C-A]
 gi|325482385|gb|EGC85392.1| hypothetical protein HMPREF9303_1082 [Prevotella denticola CRIS
           18C-A]
          Length = 1719

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/324 (12%), Positives = 91/324 (28%), Gaps = 41/324 (12%)

Query: 2   LRRVLIGLGFLFS--VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIH 57
           +RR L  L    +  V+L       L+         +      +   G ++++     + 
Sbjct: 12  MRRSLKWLVAAVATPVILFLILVGLLYCPPVQNWAVKQVAAYVSAHTGMEVSLD---HVS 68

Query: 58  ILPFPSVFFKDIRI-----DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112
           +     +    +RI              + +  L    + LPLL   + V ++   +   
Sbjct: 69  LSYPLDLQLDGLRILRQNDSIPNRKDTVADMCRLVASVDLLPLLESRVEVNELTFMELKA 128

Query: 113 N-------FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII----------DQE 155
           N         +            +   +  +V + K  V+GG I +            Q+
Sbjct: 129 NTVNFIGDLRIRGDLQRLHVVSHAVNLIGDSVRVNKADVEGGWIDVALGDTVPEDPNRQK 188

Query: 156 SDQVYFLSDLN-------LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208
                 +  LN       L +    +++ +  +    KG+ +      +      ++   
Sbjct: 189 PLWRVNIDRLNLSKTAFSLHLPGDTMSVHARFTKAVAKGTELLLHDNIYKVADLDWQGGT 248

Query: 209 NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268
               +N    ++         +     G   +    P  S     A              
Sbjct: 249 FSYDQNYVRRVRQGFDAAHMAMRDVNIGIDSFLYAAPKLSLRVRTANFR-----ERSGLV 303

Query: 269 KSRLSGNFKISDGNVRISRYKLQS 292
            +   G F +   ++R+   +LQ 
Sbjct: 304 LNDFRGAFAMDSTHIRLPGLRLQM 327


>gi|158333724|ref|YP_001514896.1| hypothetical protein AM1_0530 [Acaryochloris marina MBIC11017]
 gi|158303965|gb|ABW25582.1| hypothetical protein AM1_0530 [Acaryochloris marina MBIC11017]
          Length = 1728

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 95/306 (31%), Gaps = 29/306 (9%)

Query: 14  SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73
           + +   ++ V  FID  D       + +  + + + +       +     + F    I  
Sbjct: 35  AAIAGVSWWVLRFID-EDLTPLVAEELSKTLNRPVKMGEVQNYSL---THIRFGPSEIPA 90

Query: 74  -------KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126
                   ++ +  +K+E + +R   LP+L       +  + +P L    +  G     +
Sbjct: 91  CSPQQGCAKEDADSAKMEAVDIRFNLLPVLWSRKLPLEATLIKPQLYLDQTQDGEWIATR 150

Query: 127 RKSTMDMIH-NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
            +S        V L ++ V+ G  +I    + +    S LN  ++      +   +   +
Sbjct: 151 LRSGPSKAWIKVKLNQLQVQQGTAQIE-PANIEARQFSQLNGTLNFSTPETLYFNTQSQV 209

Query: 186 KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
                    G + +K+             K + +  Q   L    ++ L   L +   + 
Sbjct: 210 DSGGQLSVKGAWQSKQ-------------KKLEVNAQTKDLVAAPLMGLLPKLPFEINKG 256

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS---ILPNSSTDED 302
              G F V       + +   A  S+           V+ +  +      + P    +  
Sbjct: 257 QLQGQFQVKLLPQHPVTIHSDATLSQGDIWIPRQAIRVQANNIRTDVRIEVPPQRPVELK 316

Query: 303 NKTKVS 308
            +  + 
Sbjct: 317 GEAYID 322


>gi|323961106|gb|EGB56720.1| hypothetical protein ERGG_02376 [Escherichia coli H489]
          Length = 1263

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G S+     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|323941661|gb|EGB37840.1| adhesin HecA family protein [Escherichia coli E482]
          Length = 1263

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G S+     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|323936270|gb|EGB32562.1| adhesin HecA family protein [Escherichia coli E1520]
          Length = 1263

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G S+     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|300958277|ref|ZP_07170423.1| hypothetical protein HMPREF9547_03991 [Escherichia coli MS 175-1]
 gi|300315064|gb|EFJ64848.1| hypothetical protein HMPREF9547_03991 [Escherichia coli MS 175-1]
          Length = 1263

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G S+     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|606186|gb|AAA58049.1| ORF_f282 [Escherichia coli str. K-12 substr. MG1655]
          Length = 282

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 83/286 (29%), Gaps = 25/286 (8%)

Query: 2   LRRV---LIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53
           +RR+   L+  G    V+           +P       +R +   +     G  +     
Sbjct: 1   MRRLPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQ 56

Query: 54  IKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPH 111
           +        P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q  
Sbjct: 57  LSASWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLR 114

Query: 112 LNFYLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQI 169
                  + G S+     S +  +     +   ++   +  +     +    +  L    
Sbjct: 115 FRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLN 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
             R       +S+ S        G       R   +        N  + L+     L   
Sbjct: 175 DPRRHRAEGLVSLSS------LTGQHGVMQVRMDLRDDEGL-LSNGRVWLQADDIDLKPW 227

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
           +   +  N+     Q    G  ++        ++ L   + +L G 
Sbjct: 228 LGKWMQDNIALETAQFSLEGWMTIDKGDVTGGDVWLKTGRCQLVGR 273


>gi|291614248|ref|YP_003524405.1| hypothetical protein Slit_1789 [Sideroxydans lithotrophicus ES-1]
 gi|291584360|gb|ADE12018.1| conserved hypothetical protein [Sideroxydans lithotrophicus ES-1]
          Length = 1009

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/293 (10%), Positives = 85/293 (29%), Gaps = 18/293 (6%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI 83
           P      D+    E++ +  + + + + G     +   P +  +++ +   +    E K+
Sbjct: 636 PYVYPLKDYIAPIEQRLSAQLKQPVHIGGMSAASL--PPRLQLQNVTMGNNQ----EVKV 689

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLN-FYLSSKGVSNWFQRKSTMDMIHNVILEKI 142
             + +    L L S    + +  ++   ++   ++ +  S      +    I ++ L+ +
Sbjct: 690 ASIVLNFAALSLFSDVKVISEADLNDVSIDGRVINKQAESLMLLGANAQYPIRHLNLQHV 749

Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202
            +    I +   +            ++S    +      + +     I            
Sbjct: 750 KIVTDEITLPTMDGIADIDAHGAFSRVSLHSPDDKLGFDLQNNDNRWIVNVNLKESGLPM 809

Query: 203 --AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW-NEKQPIYSGVFSVAGDFSK 259
                 +      N    +       A+     L G+     +K     G          
Sbjct: 810 LPDLVFSDLSAKGNIGEGVVSFTELDAHIFNGILLGSAKLSWDKGWQLQGSLEAKTFDVD 869

Query: 260 LLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE 312
            +  +L   +  L+G    S G V++S+          S   D    V +   
Sbjct: 870 KMYPKLHV-EGDLNGEGTFSMGGVKLSQL-------GDSPRLDGTFTVKKGTI 914


>gi|293416669|ref|ZP_06659308.1| hypothetical protein ECDG_03429 [Escherichia coli B185]
 gi|291432025|gb|EFF05008.1| hypothetical protein ECDG_03429 [Escherichia coli B185]
          Length = 1263

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G S+     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|157372639|ref|YP_001480628.1| hypothetical protein Spro_4406 [Serratia proteamaculans 568]
 gi|157324403|gb|ABV43500.1| conserved hypothetical protein [Serratia proteamaculans 568]
          Length = 1291

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/329 (10%), Positives = 92/329 (27%), Gaps = 35/329 (10%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKG-GIKIHILPF 61
           +L+  G    V++    +          ++R     +A  + G  + +            
Sbjct: 27  ILLATGASLIVIVALLISGLRLALPELNNYRPQLLAKAESLSGVPVQIDFMQGSWETF-G 85

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           P +  +++R    +      +IE +++  +    LL    +  D+   Q   +   +  G
Sbjct: 86  PQLEMRNVRATLPKSN---LRIERVTLALDVWQSLLHWRWQFRDLTFYQLQFDLNTTLGG 142

Query: 121 VSNWFQ--RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFL 174
             +         +  +    ++  +++  R+  +     +       L+ LN +   R  
Sbjct: 143 EEHKGSTIEPGKISDLLLHQVDHFNLRDSRLSFLTPAGARAEFEVPQLTWLNGRDRHRAE 202

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
             IS  +++   G V        +                   ++ +Q   +        
Sbjct: 203 GQISLSTLNGQHGVVQLRMDLRDNQGLLNV------------GTVYMQADNIDMKPWFTR 250

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
           +       +   +S    +     ++       K+   + N       + +    L    
Sbjct: 251 WLRANTGLESADFSLAAWLQIQNGEIAGGSALLKQGAANWNVGKQQHRLDVDNLALTLSR 310

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAE 323
             +             E   LN + +G  
Sbjct: 311 QGTGWQV---------EVPQLNLATDGQA 330


>gi|256024181|ref|ZP_05438046.1| hypothetical protein E4_12454 [Escherichia sp. 4_1_40B]
 gi|300948325|ref|ZP_07162434.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           116-1]
 gi|301645524|ref|ZP_07245458.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           146-1]
 gi|307139933|ref|ZP_07499289.1| hypothetical protein EcolH7_17606 [Escherichia coli H736]
 gi|300452138|gb|EFK15758.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           116-1]
 gi|301076208|gb|EFK91014.1| conserved hypothetical protein TIGR02099 [Escherichia coli MS
           146-1]
          Length = 1263

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAF-----TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +  +L+  G    V+           +P       +R +   +     G  +     +  
Sbjct: 1   MPGILLLTGAALVVIAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSA 56

Query: 57  HI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF 114
                 P++   DIR + K+ G     ++ +++  +    LL    +  D+   Q     
Sbjct: 57  SWQNFGPTLEAHDIRAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRT 114

Query: 115 YLS-SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQI 169
               + G S+     S +  +     +   ++   +  +     +       L+ LN   
Sbjct: 115 NTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPR 174

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPL 226
             R   ++S  S+    G +        D    S  ++       +    L   +Q    
Sbjct: 175 RHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIA 234

Query: 227 AYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
                  L G +  ++             G          +     L+ +    +   + 
Sbjct: 235 LETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQF 294

Query: 286 SRYKLQSILPNSSTDEDNK 304
           S       +P++    D K
Sbjct: 295 S-------IPDTRITMDGK 306


>gi|332143373|ref|YP_004429111.1| hypothetical protein MADE_1019955 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327553395|gb|AEB00114.1| hypothetical protein MADE_1019955 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 369

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/378 (12%), Positives = 112/378 (29%), Gaps = 27/378 (7%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           +R    +  L  +++     +P                +        V G + + +    
Sbjct: 6   KRFCYVVAGLLLMLIAFRLYLPY-----AAATYINTTLSQSKQYDGRV-GDVDLMLWRG- 58

Query: 63  SVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF------ 114
           +   + + + +          K + +     +  L  G      + ++ P +NF      
Sbjct: 59  AYSLEYVLLYKANGQIDKPLFKADYVEFTLSWSQLFKGAAVG-RVVVNSPEINFVDGNSE 117

Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
             S  G +  +      D +  + ++K+ +  G+I   + ++     ++  ++Q+    L
Sbjct: 118 EKSQSGKNENWLS--IADQLFPLRIDKLTINQGKIAFHNPDTSPAIDIALHDIQLEVNNL 175

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PIIID 233
                LS D+   +  A+G         +     N   +     L IQ   +        
Sbjct: 176 VNSDDLS-DTRVATAKAKGQTAEQGT-ISLNAKLNPATEAPTFDLDIQADNVGLVNFKNL 233

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--RLSGNFKISDGNVRISRYKLQ 291
           L     ++ +    +    VA +  K+         +    S    I           ++
Sbjct: 234 LDTYAPFDLEAGTLTLAAEVASNEGKVKGYIKPILHNVEVFSWKGDIERDGDGFIEGSIE 293

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
           +I    +   +N+++    ++        G  S  D    D F    K       K D  
Sbjct: 294 AISAFVTELFENQSE----DQIATRIPIEGDLSNPDTQTWDAFTAILKNAFIKAFKGDVE 349

Query: 352 QYSVNKKEEKDNSHDKEN 369
           +     + E D   + + 
Sbjct: 350 ESVELDRLELDRLENPKG 367


>gi|90022829|ref|YP_528656.1| exonuclease VII, small subunit [Saccharophagus degradans 2-40]
 gi|89952429|gb|ABD82444.1| conserved hypothetical protein [Saccharophagus degradans 2-40]
          Length = 1380

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 86/305 (28%), Gaps = 23/305 (7%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPF 61
           R        + +V +        F    D+R +  RQ +  +G  I + G +        
Sbjct: 26  RFWGTLFTIIIAVAVCVQLGREAFPLLNDYRTEISRQLSGTLGVDIKI-GEVAASWKGLT 84

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKG 120
           P +   D+ +  K+  +   KI+  S     L  ++        +  DQ          G
Sbjct: 85  PKLNLIDVTVSNKD--TAVFKIKRASAELSLLDSIADWRFSWRRIAFDQFETTLTQDEAG 142

Query: 121 VSNWF--QRKSTMDMIHNVILE----------KIHVKGGRIKI-IDQESDQVYFLSDLNL 167
                    K +        ++          +I +   +I +      +    +  ++L
Sbjct: 143 HWGVAGIASKPSASGEPGFNIDDPLDVFLFGRRIDITDVKINLEFRTGHNTQLVVPKVSL 202

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNK-RSAFKITANFPAKNKAISLKIQLFPL 226
           +    F  +++ L++D    +      G  D + +  F            +   +     
Sbjct: 203 ENDRDFHRLLAELNVDDEAEAFSLVVEGIGDPRNKETFHAKGYIALNQFPMEKVLAAVGA 262

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
            +         L W E            G+  K ++ +       L           ++ 
Sbjct: 263 DFWQS---DEELAWKEG-HRLDLSAWFEGNTEKGISFKGMLISDGLPVKLPEDVQLPQLV 318

Query: 287 RYKLQ 291
           + ++ 
Sbjct: 319 QSRVT 323


>gi|24374331|ref|NP_718374.1| hypothetical protein SO_2796 [Shewanella oneidensis MR-1]
 gi|24348880|gb|AAN55818.1|AE015718_10 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 1069

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/371 (9%), Positives = 116/371 (31%), Gaps = 41/371 (11%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFK 67
           +    +++ +        +           + + ++G+ ++++G   +HI PF   V   
Sbjct: 21  ILVYLTIIYLSYLIALGLVLPKAIVAFAPEKISQVLGRPVSLQG---MHINPFNYRVNIN 77

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL---------- 116
            + + +K +    + +  L     F   + +  + +  + +  P  N             
Sbjct: 78  QLAVKEKNN-QDFAGLAQLQFEVHFWQSVFNQALVIDHIQLQAPFANISRFQTPGGTQFN 136

Query: 117 --------SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
                   +     +     +       +IL +++V   + K  D+ +  +    ++N +
Sbjct: 137 FDDIITTLNQAKTPSESDTNTEQSRPLRIILGELNVSAAKFKFDDKITKALIDYPNINFK 196

Query: 169 ISARF------LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
           +S          N  S     S K +V  + T       +    +A         +  + 
Sbjct: 197 LSQLDTEYLMLPNPASVAKTSSTKNAVTNKATPVTTAANTTPATSAANATTTIVHNQFVA 256

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL------NLELSAKKSRLSGNF 276
               A+   + L G       + +     +               N++L   +  +  ++
Sbjct: 257 QLQDAHAGEVSLAGQFQLFPFKLVGDVQLAKLKLAPLWQFVADQFNVKLGTGELSIKAHY 316

Query: 277 KIS---DGNVRISRYKLQSILPNSSTDEDNK--TKVSQDEENLLNFSENGAESMHDLNET 331
           ++     G ++++  + Q I+   +    ++    +     + +N +            +
Sbjct: 317 QVDLPEQGELQLTAERGQVIVEKVNLLNGDQSVITLPLLAVDGINVNLAKQRINIKQIHS 376

Query: 332 DFFEEEEKKNK 342
           +    + K ++
Sbjct: 377 EGLSLKAKLDE 387


>gi|77361592|ref|YP_341167.1| hypothetical protein PSHAa2677 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876503|emb|CAI87725.1| conserved protein of unknown function [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 1283

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/356 (11%), Positives = 108/356 (30%), Gaps = 21/356 (5%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60
           R++      +  ++ V    +   + +  D++++ E          +++ G I       
Sbjct: 12  RKLWQTCAIILVLLAVTVSILKYTLPYANDYKDNIENYLHTKFDISLSI-GSISASWQGS 70

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPH-----LNF 114
            P++  +++     +       I   S+       L   +++     I+  H      N 
Sbjct: 71  GPALVLENLSFKDNQTAPIALTIAKTSLELNLWESLKTLQLKSNYFVINGFHTSIKVANL 130

Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII-DQESDQVYFLSDLNLQISARF 173
           +  ++G  ++  +K  ++ +         ++   I  I +  +++   L ++  Q   + 
Sbjct: 131 FAKNEGEVSFE-QKELIEELFLGDTGHFAIENSSINFILEDGTERKLLLENIVWQNQNKQ 189

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSA-----FKITANFPAKNKAISLKIQLFPLAY 228
                 L++  I      +                  + AN    +  ++  I       
Sbjct: 190 HLGSGSLALPGISVG-SFDARIALKGDTIEKMAGDMYVQANEVDVSNWLAQYINTEKQQL 248

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI--SDGNVRIS 286
              I+L   L  N+              F++        + S   G F +     + R+ 
Sbjct: 249 HSNINLQAWLELNQGLVS-DVKVQWLPSFARWELAGEKQQLSLSEGGFHLFPEQKSWRLK 307

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342
              L     + S     + +    ++N +   +     + DL E   F       +
Sbjct: 308 STGLAFNSNDKSW-PSLEFEALLGKQNKIWLQQVDIALLSDLAELTNFNNLTPFLQ 362


>gi|238758351|ref|ZP_04619529.1| hypothetical protein yaldo0001_2390 [Yersinia aldovae ATCC 35236]
 gi|238703474|gb|EEP96013.1| hypothetical protein yaldo0001_2390 [Yersinia aldovae ATCC 35236]
          Length = 1268

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/318 (11%), Positives = 96/318 (30%), Gaps = 33/318 (10%)

Query: 13  FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID 72
            ++++ G   +   I   D+R     +   + G  + +           P++  +DI++ 
Sbjct: 2   VALLVSGLRMMLPLI--NDYRPQIVAKIQSVSGIPLEIGFMQGAWESFGPTLELRDIQVK 59

Query: 73  QKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--QRKS 129
                    +++ +++  +    LL    ++ DM   Q  L+   +     N        
Sbjct: 60  MPHTD---WQVQRVTLALDVWQSLLHWRWQLRDMTFYQLQLDLNTTLNMQQNNSRNLEAG 116

Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSIDSIKGS 188
            +  I    L+   ++  RI  +     +    +  L    S         +S+ +I G 
Sbjct: 117 NLADIFLRRLDHFDLRNSRISFLTPSGPRAKLDIPQLTWLNSHNRHRAEGEISLSTINGQ 176

Query: 189 V-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID--LFGNLFWNEKQP 245
             + +   +  + +                ++ +Q   +     I   L  N   +  + 
Sbjct: 177 HGVVQVRMDLHDNQGILN----------NGTVYMQADNIDLKPWISRWLRANTGLDSAEF 226

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
             +   ++        N+ LS  ++  +         + +  + L+     +    D   
Sbjct: 227 SLAAWLTIKSGEIYHGNVLLSEGQANWT--VAGKAHQLAVDNFVLEGRRQGNGWQID--- 281

Query: 306 KVSQDEENLLNFSENGAE 323
                    LN   +G  
Sbjct: 282 ------APELNLKTDGQA 293


>gi|303230245|ref|ZP_07317013.1| phage prohead protease, HK97 family [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302515171|gb|EFL57145.1| phage prohead protease, HK97 family [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 1429

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 53/392 (13%), Positives = 125/392 (31%), Gaps = 34/392 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKI--AVKGGIKIHI 58
           M R+    +G   +V+ +G   +   I+    R          +   +   ++    +HI
Sbjct: 1   MTRKKWCLIGA--AVLGLGVVGIATSINPIAER-YVAPMVQEQLHNTVRGTIQYD-SMHI 56

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-------GEIRVFDMYIDQPH 111
                V  +++ +  + D    + +  +++  ++    S       G   V  + +++P 
Sbjct: 57  DWDGDVVLQNVSLRDENDHL-VAAVPTMNVSMKWTSAPSILMGNSSGAAIVSTITLEKPD 115

Query: 112 LNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG---GRIKIIDQESDQVYFLSDLNLQ 168
           ++ +  + G  N      +         +   V     G ++  D     V+ LS+L+  
Sbjct: 116 VHVWQLADGSWNVNSLLESSSKNDKKSFDGNIVINDATGAVRFKD---GNVHRLSNLDGN 172

Query: 169 IS-ARFLNIISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLKIQLFPL 226
           I+          L+      S+   G+ + +        + A     +  +++      L
Sbjct: 173 IALNVDGMTKGALNGLLDDHSIAVNGSIDMNKMDDFDLFVRAESVDISGIMNMVPSNKNL 232

Query: 227 AYPIII--DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
           +    I  D+   +   + +   SG  +  G      N   + +  + +G     +  V 
Sbjct: 233 SITSGILHDVKAQITGRDGKYSMSGNLAFDGLGGTYKNGSTTYQIGQGNGKIFFQNNTVL 292

Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344
           IS     S    +         V+  +E  LN +        +     F + +   N   
Sbjct: 293 ISH----SGWYVNDQAVKVNGLVTLGDEVGLNLNAVADSVALE----AFTKNQITGNVGA 344

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376
            +       SVN         D  + +N+  D
Sbjct: 345 RVHIGG--TSVNPYVSGSIKSDAISYDNYQID 374


>gi|294507265|ref|YP_003571323.1| conserved hypothetical protein containing DUF490 [Salinibacter
           ruber M8]
 gi|294343593|emb|CBH24371.1| conserved hypothetical protein containing DUF490 [Salinibacter
           ruber M8]
          Length = 1726

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/268 (11%), Positives = 72/268 (26%), Gaps = 19/268 (7%)

Query: 63  SVFFKDIRIDQKEDGS----FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
           S+   D+ + +           + ++ L++      LL G + +  + ID P      ++
Sbjct: 90  SLRLADVSLTRPAPDRAAPATMAHVDSLAVEYRPWALLRGRLHLTAVSIDGPSATLRQAA 149

Query: 119 KGVSNW-------FQRKSTMDMIHNVILEKIHVKGGRI--KIIDQESDQVYFLSDLNLQI 169
               +W                   + ++++ V  G    +      D    +  + ++ 
Sbjct: 150 DSTWDWARHLPASAPASEDTSAALPIRVDRLRVSAGAFAARFYAGGRDSTARVRGITVRA 209

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
              +      LS+     ++   G    D              +  A+   ++L      
Sbjct: 210 RDLYYG----LSMGGRLDTLGLRGRLPTDTTELRLAARGAVSERRVALD-TLRLASPRSA 264

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS-DGNVRISRY 288
           +       L       +     SV  D   L +L   A    +     +     +  S  
Sbjct: 265 VQGGGTARLPAAPGDSLDDVALSVRADPLVLGDLTAFAPFLDVDPREALDLRARLTGSED 324

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLN 316
           +L      +  D   +          L 
Sbjct: 325 RLALTTDVTVRDGGGRFTAEATATPRLA 352


>gi|158520813|ref|YP_001528683.1| hypothetical protein Dole_0796 [Desulfococcus oleovorans Hxd3]
 gi|158509639|gb|ABW66606.1| hypothetical protein Dole_0796 [Desulfococcus oleovorans Hxd3]
          Length = 577

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 78/223 (34%), Gaps = 8/223 (3%)

Query: 2   LRRVLIGLG-FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +++++   G   F V++ G     L       +   ER+ T +VG K+ + G + + ++P
Sbjct: 1   MKKLIRWPGLIAFVVLVGGLAGFWLLFADAIVKGIIERRGTAMVGAKVEIAG-LDLTLVP 59

Query: 61  FPSVFFKDIRIDQKE-DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
              +    + +   +   +   +I  + M  +   LL  ++ + +M I+        S  
Sbjct: 60  A-GMRISGLAVTDPDSPMTNAVEIGEMVMTVDSGRLLRRKLIIDEMGIEGMRFGTARSVS 118

Query: 120 G---VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
           G        + K+         L    +   +  +  ++ + +   ++L   I A     
Sbjct: 119 GAVKKRTADRPKNAEKAAKKFNLPSFDMPDPKEILEKEDLETIRLANELKADIDAARARW 178

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
            + +     + +   E     +  ++  +  +         ++
Sbjct: 179 EARIQELPDRQAFE-EYKSRINKIKTGARGLSGLLGTAGEAAV 220


>gi|218666140|ref|YP_002427384.1| hypothetical protein AFE_3017 [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|218518353|gb|ACK78939.1| hypothetical protein AFE_3017 [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 446

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/289 (11%), Positives = 84/289 (29%), Gaps = 21/289 (7%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68
             +F ++++       F      R   E      + + + +      H       +    
Sbjct: 32  AAVFILLMLVVLGGVFFWFAGGPRYAVEEFLAGRLRQPVYLAANPGWHWGKQELRIVLPG 91

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128
           +R+   +          +++   +  LL G +++  + +D P L          N     
Sbjct: 92  LRLGPTD--LPLFSASRITVALPWRALLHGRVQLQRIELDTPVL----------NAPWTG 139

Query: 129 STMDMIHNVIL-EKIHVKGGRIKIIDQESDQVYFLSDLN---LQISARFLNIISPLSIDS 184
           +       + L  ++ V+ G ++     +     L+ ++   L      L         +
Sbjct: 140 AANASGAALSLPGRVVVRDGTLRWS-GVAGHTLSLTAVHGQVLADGPSRLVGDWHWRDKT 198

Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
            +    A  T     +     +          + + I         ++       W E++
Sbjct: 199 GRWHFAAGMTSAPTLQARRISLLVGTARDPALLQVGIPTLQSVSGELVLPTMRARWQEQK 258

Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLS--GNFKISDGNVRISRYKLQ 291
              S    V      +    L+ ++  L+   +  +    V ++  KLQ
Sbjct: 259 QG-SARLDVQALHLNMAQGRLAMQQGALTVGNDLSLQIRAVALNWKKLQ 306


>gi|294505263|ref|YP_003569325.1| hypothetical protein YPZ3_3154 [Yersinia pestis Z176003]
 gi|262363326|gb|ACY60047.1| hypothetical protein YPD4_3143 [Yersinia pestis D106004]
 gi|294355722|gb|ADE66063.1| hypothetical protein YPZ3_3154 [Yersinia pestis Z176003]
          Length = 1300

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 104/327 (31%), Gaps = 33/327 (10%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PS 63
              G   +  V L+ +    +     ++R     +   + G  + V G ++     F P+
Sbjct: 2   FATGATIIVVVALLVSALRMMLPLINEYRPQIVAKIQSVSGIPLDV-GFMQGTWETFGPT 60

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +  +DIR    +      +++ +++  +    LL    +  D+   Q  L+ + +     
Sbjct: 61  LELRDIRAQMPKAD---LQVQRVTLALDVWQSLLHWRWQFRDLTFYQLQLDLHTTLDATQ 117

Query: 123 NWF--QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISP 179
           N         +  I    L++  ++  RI  +     +    +  L    S+        
Sbjct: 118 NNGSNLETGNVHNIFLRQLDRFDLRNSRISFLTPSGPRAELEIPQLTWLNSSTRHRAEGQ 177

Query: 180 LSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID--LFG 236
           +S+ +I G   + +   +  + +                ++ +Q   +     I   L  
Sbjct: 178 ISLSTINGQHGVVQVRMDLHDNQGILN----------NGTVYMQADNIDLKPWISRWLQN 227

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
           N   +  +   +   S+        N+ LS  ++  +     +   + +  + L+     
Sbjct: 228 NTGLDNAEFSLAAWLSIKSGEVYRGNVLLSQGQANWT--VGSNSHQLSVDNFVLEGRRQG 285

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAE 323
           +    D           +LN   +G  
Sbjct: 286 NGWQID---------APVLNLKTDGQA 303


>gi|84503043|ref|ZP_01001139.1| hypothetical protein OB2597_01182 [Oceanicola batsensis HTCC2597]
 gi|84388587|gb|EAQ01459.1| hypothetical protein OB2597_01182 [Oceanicola batsensis HTCC2597]
          Length = 1098

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 92/319 (28%), Gaps = 42/319 (13%)

Query: 29  WTDFREDFERQATLIV-GKKIAVKGGIKIHI--LPFPSVFFKDIRIDQKEDGSFESKIEG 85
               ++  E +    + G  +     + + +     PS+   D+RI     G     +  
Sbjct: 57  PDWLKQRIEARVAGALPGTSMEFA-DLTLTVTDSWQPSLRLTDVRIMPLAGGDPVL-LSD 114

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR------------------ 127
           ++   +   LL G++R   + +    +N +    G                         
Sbjct: 115 VTGSFDAEALLDGQVRPRVVTVTGARINVHRDEDGEYGVALGMPGGVGANNVARDLAQTL 174

Query: 128 ---KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
                  D      L +I   G  ++  D++S + + +    L +      +        
Sbjct: 175 RAVSDLFDYPVFASLRRIEGAGLTVQYEDRQSRRSWTVDGGRLALEREADALRLRGDFAL 234

Query: 185 IKG-----SVIAEGTGNFDNKRSAFKI----TANFPAKNKAISLKIQLFPLAYPIIIDLF 235
           + G     ++    T    +  +A  +     A     +++  L + L  L  PI   L 
Sbjct: 235 LGGHSYATTIELSATAAMHSSAAALTLLFEDAAARDIASQSAGL-VWLGVLDAPISGALR 293

Query: 236 GNLFWNEKQPIYSGVFSVAG--DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
            +   +      +G   +             +    +R    ++     +  S   ++S 
Sbjct: 294 VSTNEDGALGPLNGTLRIGSGAVAPNASAEPIPFDAARTYFRYEPEARTLTFSEISVES- 352

Query: 294 LPNSSTDEDNKTKVSQDEE 312
              +  +   + +V   + 
Sbjct: 353 ---AWVEATAEGRVVLGDI 368


>gi|313894691|ref|ZP_07828254.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313440881|gb|EFR59310.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 1397

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/327 (13%), Positives = 102/327 (31%), Gaps = 27/327 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           ++  +    +  +  +GA   P  I  T      + Q    +   +       + +    
Sbjct: 4   KKWCLIGAAILGLSGIGASINP--IAQTYVAPMVKEQVNNAINGSVNYD---SLRVNWNG 58

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-------GEIRVFDMYIDQPHLNFY 115
            V   D+ I  ++D         +++  +   L S       G   +  + ++ P L+ +
Sbjct: 59  DVVLTDVTIKDRDDHL-VGTAREVAVGVKLSALPSIITSNTSGATAISSVIVEAPDLHIW 117

Query: 116 LSSKGVSNWFQRKSTMDMIHNVILEK-IHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
             + G  +  +     D   +   +  I +  GR+ +   +      +  L+  ++    
Sbjct: 118 QLADGSWSVEKLVKPSDPNKSGSFDGSITIHDGRVAVRT-KDGLKRNVESLDGTMALNMG 176

Query: 175 NII-SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA-----ISLKIQLFPLAY 228
            +     + D    SV+  GT + D+    F +       + A     + L+  L     
Sbjct: 177 GMSKGAFTADVDGSSVVLNGTIDMDHVS-NFDLFVQADEIDTAGFMSFVPLRQDLSVTGG 235

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
            +  DL  N+   +   I SG     G              +  +G   ++   + ISR 
Sbjct: 236 KLQ-DLHLNVKSEDGNYIMSGNVGFKGLTGTYKRGNTIYNITDGTGRIMLNHDQIVISRS 294

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLL 315
             +     +         V+  +E   
Sbjct: 295 SWRV----NDQVAKVNGLVTLGKEEEY 317


>gi|209694083|ref|YP_002262011.1| hypothetical protein VSAL_I0488 [Aliivibrio salmonicida LFI1238]
 gi|208008034|emb|CAQ78173.1| putative exported protein [Aliivibrio salmonicida LFI1238]
          Length = 1287

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/284 (11%), Positives = 85/284 (29%), Gaps = 24/284 (8%)

Query: 21  FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSF 79
             +P       ++ + E+  +   G  I++ G +K       PS+    +       G  
Sbjct: 32  LLLPTL---NKYQPEIEQLLSQSTGFSISI-GEVKGRWRNTNPSLNLTKLTATDPNTGDE 87

Query: 80  ESKIEGLSMRAE-FLPLLSGEIRVFDMYIDQPHLNFY-----------LSSKGVSNWFQR 127
              +  + ++      L + + +  D+ ID+   +             L     +     
Sbjct: 88  IISVGSVEIQLNILSSLWAQQPQFADLRIDKLTADLTSLGNDKSEENKLEVDDKNTEDSL 147

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187
              ++ +  V L    +K   +       ++   L D +LQ        ++   +  +  
Sbjct: 148 SKRLEDLFLVRLNHFSIKNSHVTFTALNGNEKTILID-SLQWRNESRKHLAEGVVSVLGS 206

Query: 188 SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
            +      N     + FK    F + +    ++ Q   +   I  ++       E +   
Sbjct: 207 EI------NQLKVIANFKEKGTFKSLDGDFYVEAQNIQITPWIKDNIQQEYGVTEGEVSV 260

Query: 248 SGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
           +   S          +E +        +  I   ++    ++LQ
Sbjct: 261 NAWLSFKNGQPIDALVEAAPSYINWEEDKTIHKLSIESGVFELQ 304


>gi|254448636|ref|ZP_05062095.1| conserved hypothetical protein [gamma proteobacterium HTCC5015]
 gi|198261825|gb|EDY86111.1| conserved hypothetical protein [gamma proteobacterium HTCC5015]
          Length = 1283

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/287 (10%), Positives = 88/287 (30%), Gaps = 25/287 (8%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFR-EDFERQATLIVGKKIAV-KGGIKIHILPFPSVFFK 67
             L  ++L     + + +   + R    ER+ + ++G  + +            P V F 
Sbjct: 5   AVLLLLILTSQIGLRILLPMAEDRLPRIERELSTLLGGDVTIVSMDSHWDWF-VPYVDFV 63

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGVSNWF- 125
            + +  +E   +   +  LS+    + +   G      + +    L      +       
Sbjct: 64  GVEVVDRETPEWRQSLGRLSVGVNLIEMWRAGHWMPNSLSLSDARLQVLYHPEKGYRLPG 123

Query: 126 ---QRKSTMDMIHNVILEK---IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
              + +          L +   +H++   + I +  + +   +  ++  +S+        
Sbjct: 124 IYIESQDGNTAPPWQSLSQHKFLHIENASLAIRNVVNQRELRVDAIDFDLSSGDSRYRGQ 183

Query: 180 LSID-----SIKGSVIAEGTGNF-DNKRSAFKITANFPAKNKA-----ISLKIQLFPLAY 228
           L+           SV  + +G + D +     +    PA +            ++    +
Sbjct: 184 LNWRPPAQIGPPASVQYDVSGQWLDPRSWEGGVAVQVPAVDLDALKHFFPPAQRIETGDF 243

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
            +  D+  +    ++    SG   +     +  N++  A      G 
Sbjct: 244 SLRADIDFD---RQQGATGSGQIHLGVQLLEGGNIQWDAPLLLTRGE 287


>gi|110680197|ref|YP_683204.1| hypothetical protein RD1_2999 [Roseobacter denitrificans OCh 114]
 gi|109456313|gb|ABG32518.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 1119

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 89/292 (30%), Gaps = 51/292 (17%)

Query: 6   LIGLGFLFSVVLVGAFTVPL------FIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           LI  G +F+++LVGA    L       +     R+  E Q    V         + I   
Sbjct: 21  LIWTGVIFALLLVGASVSALWLQGRELLAPPWLRDRIEAQLGQAV-------PDVDISFG 73

Query: 60  ---------PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110
                      P    +D+ +   +          +S       L+   + +  ++++  
Sbjct: 74  EVVVVIDDDWRPRFSVRDVHLADAQGAE-IVSFSDVSGALSLSALMERRLSLGTLFVNGV 132

Query: 111 HLNFYLSSKG------VSNWFQRKSTMDMIHNV--------------ILEKIHVKGGRIK 150
            +  + S  G       +N          +  +               L    ++   ++
Sbjct: 133 FVTLHRSPDGPLSLSTTANAEVVSMQAPTLVELVSELDKLLLRPVLRDLSLFEMRAITLR 192

Query: 151 IIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG-----SVIAEGTGNFDNKRSAFK 205
             D  +D+ + +    +++      +   + +  + G     ++ A+ TG     +++F 
Sbjct: 193 YEDARADRAWTVDGGTMRLRRAGDALGINVDLAVLGGGADVATLSADYTGTIGAAQASFG 252

Query: 206 ITA-NFPAKNKAISLKI--QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254
           +   N  A + A        L  L  PI   L G+   +      +    + 
Sbjct: 253 LALENIDAGDVASQGAAVSWLSVLQAPISATLRGSTQEDGALAPLNVALQIG 304


>gi|121534952|ref|ZP_01666771.1| protein of unknown function DUF490 [Thermosinus carboxydivorans
           Nor1]
 gi|121306551|gb|EAX47474.1| protein of unknown function DUF490 [Thermosinus carboxydivorans
           Nor1]
          Length = 1444

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/381 (10%), Positives = 106/381 (27%), Gaps = 38/381 (9%)

Query: 31  DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
             ++    +     G ++      ++ +  +  + F D+ +         +  E +++  
Sbjct: 34  RMQDKVAEELGRAAGGRVTFA---RVEVTGYNKLSFYDVAVYDARGER-LAASERVTVTI 89

Query: 91  EFLPLLSGEI---RVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGG 147
               +LSG      V  + +++P L       G  N  Q         +    +I ++ G
Sbjct: 90  SLTSMLSGHFGPEAVTSVTLERPLLELIQHHDGRWNVEQFLDRPGRDGSACRARITLEDG 149

Query: 148 RIKIIDQESDQVY-----FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202
            + +   +           +  ++       L+     +  + +G++  +G G      +
Sbjct: 150 TVSMRSPQGAWQAEKVSGTIDFVHNPTIFIKLDSTVDGAKVTAEGTLNTDGQGVVRLTAA 209

Query: 203 AFKIT--------------ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248
              +T                  A++  ++++     L Y     + G     +  PI  
Sbjct: 210 EAPLTRLAALAPAGSMVKLTAGTAQDIMLTVRRDGQGLTYAGEARIAGAALDIDGIPIRD 269

Query: 249 GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI--SRYKLQSILPNSSTDEDNKTK 306
           G   +         L L   K+ + G      G + +  S   L   + +++ D      
Sbjct: 270 GSALL---TITPQYLYLYKGKATIHGQTVTVHGRIALATSEPVLDLAVASAAFDPAALGY 326

Query: 307 VSQDEENLLNFSENGAESMHDLNETDFFEEE-------EKKNKNDDLKKDDIQYSVNKKE 359
                      +  G  +   +       +                LK   +  +     
Sbjct: 327 EPLQGPLAFKLTVAGTAANPVVTGQAALRDGRIAGYPVTNLQTKIVLKNKVLTVTDGTVN 386

Query: 360 EKDNSHDKENQENFSGDKMIL 380
                   +   + +G    L
Sbjct: 387 AFGGRVAVKGTLDLTGQNYEL 407


>gi|212634629|ref|YP_002311154.1| pili biogenesis ATPase [Shewanella piezotolerans WP3]
 gi|212556113|gb|ACJ28567.1| ATPases involved in pili biogenesis, putative [Shewanella
           piezotolerans WP3]
          Length = 1068

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/389 (11%), Positives = 115/389 (29%), Gaps = 38/389 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKE---DG 77
            + L I +   +    +Q + ++ + + +     I I PF   +     +I + +   + 
Sbjct: 72  ILGLLIPYIAVK-QVPQQLSNLLQRPVILN---DIRINPFTFEMTIDQFQIQESKTTLNS 127

Query: 78  SFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSS-----------------K 119
               + E L+    F   + +    + D+ +  P LN                      K
Sbjct: 128 DEFVEFEQLTFEYRFWHSIFNTAFSIADVTLLNPSLNVERLKTDNSLTFNFSDILDTLAK 187

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
             S           + + ++E + +    +  ID  ++       +NL I +        
Sbjct: 188 NSSQPEGTSEPATGLPHFMVENLAIVDANLSFIDNITEGKLRYPQVNLNIKSFDSKNALS 247

Query: 180 LSIDSIK----GSVIAEGTGNFDNK-RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
           +S+ S +            GN   +  +   +     +    I L   +    +   ID 
Sbjct: 248 MSMQSKQEEQSNQYAIHFVGNNGGEISTQGVVQLEPLSIVGDIQLT-DIQLPQFWSFIDK 306

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV---RISRYKLQ 291
                    +      + +    +    +  +    +   +  + D  +    +  + ++
Sbjct: 307 QFIANLASGRLSVDSQYRLEE-KNDYFQVTTNEGLIKFE-DLTLIDDKITVASLPIFAIE 364

Query: 292 SILPN-SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350
            I  + +          SQ        ++ G+              E K+ ++D +   D
Sbjct: 365 GIEFDLNHQSISADKISSQGLVVNTTLNQKGSNLEKLFEPKLATTAEPKQQQDDVVDNAD 424

Query: 351 IQYSVNKKEEKDNSHDKENQENFSGDKMI 379
            +          N  D EN +    +K+I
Sbjct: 425 KEAQSLPWTAVLNGVDIENYQVNLTEKII 453


>gi|317485208|ref|ZP_07944089.1| hypothetical protein HMPREF0179_01442 [Bilophila wadsworthia 3_1_6]
 gi|316923499|gb|EFV44704.1| hypothetical protein HMPREF0179_01442 [Bilophila wadsworthia 3_1_6]
          Length = 1060

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/339 (11%), Positives = 96/339 (28%), Gaps = 23/339 (6%)

Query: 2   LRR----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKK---IAVKGG- 53
           ++R    +L  L  LF  +++         +       F R  +           +    
Sbjct: 1   MKRSTSILLYVLLPLFWALVLALGFFIYTFNQDPV--GFARSLSARFSAPEAGFVLSADQ 58

Query: 54  IKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113
             + + P P+     + I           ++  ++  +F  LL GE R+  + + +P L 
Sbjct: 59  ASLSLFPRPAASVSGLTIRTPA---MTLFVDEGAVYPDFWALLHGETRIAGVRLLKPTLL 115

Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-----VYFLSDLNLQ 168
                 G +    ++    +   +    + +K G I  +   +++      + +S ++  
Sbjct: 116 LE-PPAGTTPDATQQPRFSIPPQLAEMDVELKDGTIASLLPGANKSGIHSQWRMSGISGS 174

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
            +         LS+   K           D +    +  +N   +   +      FP   
Sbjct: 175 ATVPGNGEPGELSLSVGKMEWYGNTPPEKDGQAPPIQTLSNVDLEISDLEY---AFPADA 231

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
             ++               S  F +                + L G F +   +V +   
Sbjct: 232 AAMLRFKATCAMPLSFGEGSPRFVLGVTARTTQGTLAIDGVASLDGTFSLKRQSVPVHVL 291

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
              +      +       + Q      +    G ++  D
Sbjct: 292 LPFTTEAPLGSLFQG-APLPQIAIKGASLKVEGDQATLD 329


>gi|332142212|ref|YP_004427950.1| hypothetical protein MADE_1014090 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327552234|gb|AEA98952.1| hypothetical protein MADE_1014090 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 1156

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/368 (13%), Positives = 103/368 (27%), Gaps = 55/368 (14%)

Query: 13  FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71
             +V      +   +     +    +      G+K +V     I I PF   V  ++  I
Sbjct: 21  LVLVYFTYALLLGVLAPAILKTKLPQIVEEQTGRKASVA---DIAINPFLLKVDVRNFTI 77

Query: 72  ------------------DQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHL 112
                                +  S    +  +S+   F   + +    V  + ID P +
Sbjct: 78  YASAHSGVLSESQIEKETTNTQPDSRFFSVGHMSLDVGFWHSVFTLTPAVEKLSIDAPFV 137

Query: 113 NFYLSSKGV--------------------SNWFQRKSTMDMIHNVILEKIHVKGGRIKII 152
                +                       ++    +S    I ++ L +  +  G + I 
Sbjct: 138 TVARLNNTNTTQTFNFSDILEHVAQQTPETDGAPSESENGQIPHITLGEFSLTHGHVIIE 197

Query: 153 DQESDQVYFLSDL-----NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207
           D+ +D +    +L     +L   A   +     S+ S   +     T  F+  +      
Sbjct: 198 DRVTDTLLNYPELEVALQDLDTHAVLKDTAQSTSLQSANDAASKGSTSAFNQYQFTL--- 254

Query: 208 ANFPAKNKAISLKIQLFPLAYPIIIDLF--GNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
                   +I  + QL PL     +D+     +                G  S  L+ E+
Sbjct: 255 VTAEKGKISIDGEFQLSPLKLTTSVDIDDIALVPLWSLGKHLIAANLADGTVSVSLHAEI 314

Query: 266 SAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
             +K      F +  G   I+    +    ++S    +   +     + +N      +  
Sbjct: 315 FEEKDAF--QFLLQHGEFEINNLLFKRSPISNSKGGKDILSIPSFAVHNINVDALQQQVN 372

Query: 326 HDLNETDF 333
            +    D 
Sbjct: 373 IERVSLDA 380


>gi|94266835|ref|ZP_01290496.1| Protein of unknown function DUF748 [delta proteobacterium MLMS-1]
 gi|93452486|gb|EAT03082.1| Protein of unknown function DUF748 [delta proteobacterium MLMS-1]
          Length = 987

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/292 (10%), Positives = 83/292 (28%), Gaps = 37/292 (12%)

Query: 36  FERQATLIVGKKIAVKGGIK-IHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93
            ERQ   +  ++  +   I  I I P+  +   + + +  +E  +    +E L +  E  
Sbjct: 38  VERQLVSLSAERAELTTSIDNIAINPYTLTFTMEGLNVTDRE-AAPLLALERLFINLELA 96

Query: 94  PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------------FQRKSTMDMIHNV 137
            ++       + ++    +       G +N                   +         +
Sbjct: 97  SVVRRAWSFNEFHVMGLEVALERFHDGTTNLGVVAERWLATAEPKEQAPQPQEKSDPVRL 156

Query: 138 ILEKIHVKGGRIKIIDQESDQVY--FLSDLNLQISARFLNIISPLSID-----SIKGSVI 190
           ++  + V    + ++D    + +   +  LNL +      +    + D            
Sbjct: 157 VIADLLVDSAALSLVDNVPAERFATRVEALNLSVQNLSTLLDDTAAHDLTLTLGNDAVFT 216

Query: 191 AEGTGNFDNKRSAFKITANFPAK-------NKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243
            +GT + +  RS  ++T                +   +    L   +             
Sbjct: 217 WDGTSSLNPLRSQGRVTLQGAYPRLVLEYFQDRLPFDLNGGRLETELDYRAGAAADGALS 276

Query: 244 QPIYSGVFSVAGDFSKLLNL---ELSAKKSRL-SGNFKISDGNVRISRYKLQ 291
             I     ++ G      +      S  +  L +G  +     V +   +L+
Sbjct: 277 AAITDLQLTIMGTVLTASDSGERLASLPEISLENGELRWPAKTVSLDALRLR 328


>gi|261879206|ref|ZP_06005633.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270334153|gb|EFA44939.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 1541

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/398 (12%), Positives = 112/398 (28%), Gaps = 46/398 (11%)

Query: 2   LRRVLIGLGF------LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIK 55
           +++ +  +G       L  +VL   F  P F  W    +     A+  +G +I+V     
Sbjct: 1   MKKYVKWVGIGILIPVLLMIVLCLLFYFPPFQKW--AVKQVTAYASQEMGLQISVG---H 55

Query: 56  IHILPFPSVFFKDIRIDQKEDG-----SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110
           + +     +  +D+++ Q  D         + I  +    +  PL   ++ +  +  D  
Sbjct: 56  VSLAFPLDLALEDVKVLQPNDSLEHVTDTVADIGRVVADVQLRPLFDKQVMIDKLAFDHM 115

Query: 111 HLNFYLSSKGVSNWFQRKSTMDMIHNVILE--KIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
            +N        SN+         + ++ L+   I +   R+ I          + D+ L 
Sbjct: 116 KVN-------TSNFIPTARIRGTVGHLDLKAHGIDLNDERVNINHASL--RDAVLDIALT 166

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGT---GNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
            +     + S          +  E T    +      + K                 +  
Sbjct: 167 DTVIPDTMPSENFWKIKLAQLKVEDTDFILHMPGDTLSVKAYLGRTLARNTY-----MDL 221

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG-NFKISDGNVR 284
                 +   G+L WN  +  Y   +    +     +L L A K +     +  S  +++
Sbjct: 222 YQGLYSV---GHLDWNNGRLQYDKNYEPKVEGLDYSHLSLDAIKLKADSFRYCNSKLDMK 278

Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQD--EENLLNFSEN-----GAESMHDLNETDFFEEE 337
           I     +     +  +   K  +         LN               DL   D  +  
Sbjct: 279 ILAATFREKSGLAVENLQGKLAMDSTRFALPDLNLKTEAGTELSLAYDMDLQAFDDTQPG 338

Query: 338 EKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSG 375
           +   +           ++           +   +    
Sbjct: 339 KLGMQLKGQIGKQDLITIAGNSLPRELARRWPAKPLIA 376


>gi|116748275|ref|YP_844962.1| hypothetical protein Sfum_0830 [Syntrophobacter fumaroxidans MPOB]
 gi|116697339|gb|ABK16527.1| protein of unknown function DUF490 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 1256

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 85/286 (29%), Gaps = 29/286 (10%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93
           +    +     G  + +         PF  +   D+ +   +      +     +     
Sbjct: 50  DRLVSEVEGETGYSVRIG---SYRWWPFSKLELVDLTVKAAD--RNLLECRHAEISYGI- 103

Query: 94  PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ---------RKSTMDMIHNVILEKIHV 144
            L    +R  ++ +++P L+     KG                      +  V+L K+ V
Sbjct: 104 ALEWPPVRPREIVLEKPALHLESRGKGEFRIPALNGGRAADGSPEKGLGLLPVVLPKVRV 163

Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204
            GG +    Q+  QV  + ++   +  R +     + I    G                +
Sbjct: 164 IGGAVD-ASQDGRQVLAIREVTGTLLLREIRDPDGVRIKVDFGQWQGRADLPAWG---DW 219

Query: 205 KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS-VAGDFSKLLNL 263
           ++T N    + A+      F L     ++  G+    E +P Y G  + +   F     +
Sbjct: 220 ELTGNAEISDGAVHSGGIRFSLREKGSVECRGD---WELRPPYQGAATVLLNGFPVDSFV 276

Query: 264 ELSAKKSRL---SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
                  RL   SG   +         + L   +  +  D   K +
Sbjct: 277 SGHGGLPRLKEVSGRLVLDHKT---EAFVLDHEINTNLGDFAGKLE 319


>gi|197119545|ref|YP_002139972.1| hypothetical protein Gbem_3175 [Geobacter bemidjiensis Bem]
 gi|197088905|gb|ACH40176.1| protein of unknown function, DUF490-containing protein [Geobacter
           bemidjiensis Bem]
          Length = 1485

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/361 (13%), Positives = 107/361 (29%), Gaps = 37/361 (10%)

Query: 2   LRRVLIGLGF-LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIA---VKGGIKIH 57
           ++R+ + LG  + ++ LV    +   +D +              G ++    V+G ++  
Sbjct: 1   MKRIALYLGGAILALALVVFAGLVWLVDTSSGARFALTTLDSFAGVEVTVQKVEGRLRDR 60

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
           +L       + + + +        ++E L +  +   LL G++ V ++ +    +     
Sbjct: 61  LL------LQGVTVSRP---RMLVRVEKLRLVWDPERLLGGKLLVHELALRGVRI----- 106

Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
                       T        L    V G    I  + +                     
Sbjct: 107 ---------EDDTPLSEKAPELRWPRVSGAARSIDAEVTRFSLKELSYRHLQQPPSELKE 157

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
              S+   +G++   G G+    R              ++SL ++L P A    +D    
Sbjct: 158 LAASLALKEGTLTLTG-GSISASRGTASGELAAGLWRPSLSLDLRLSPSAAVADMD---- 212

Query: 238 LFWNEKQPIYSGVFSVAGDF-SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
             ++ +  +  G           L      A +  L+    I+     +   KL      
Sbjct: 213 -AFSVQARLMPGTLPEQMAGPLVLSGRRGGAPRLELTSELGITSTGFNLRNLKLVRPGRR 271

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMH--DLNETDFFEEEEKKNKNDDLKKDDIQYS 354
            +        +++ E  +LN +   AE     +LN  D        +        +   +
Sbjct: 272 GTLSGSGSMTLTKTE-PVLNLALRAAELDLSKELNTPDLISGTLNFSGTPSNYLGNFSLA 330

Query: 355 V 355
            
Sbjct: 331 N 331


>gi|67921753|ref|ZP_00515270.1| Protein of unknown function DUF490 [Crocosphaera watsonii WH 8501]
 gi|67856345|gb|EAM51587.1| Protein of unknown function DUF490 [Crocosphaera watsonii WH 8501]
          Length = 1815

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/320 (9%), Positives = 83/320 (25%), Gaps = 18/320 (5%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93
              E+Q +  + + + +     +    F  + F    +        +  +  L +    L
Sbjct: 85  PMVEQQLSRFLNRPVELG---TLETFSFNYIRFGSTDLLSTPTDPAKVSMSALKISYNPL 141

Query: 94  PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR-IKII 152
             +       ++   +P                + + ++    V  + + ++ G+ I + 
Sbjct: 142 SYIINGKLEIEVTAIEPSAYLEQGKN-RDWLVTKFNKLNPNSPVRFKHLTIEKGQAIVVS 200

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212
                +     +L        +          +   ++  G  N        +   N   
Sbjct: 201 RSAEGEKEDPINLQNLSGIIQVIHERREIKFQVNSQIVDSGKLNVSGVYDRNEKATNLLV 260

Query: 213 KNKAISLKIQLFPLAYPIII---DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK 269
           +   I+       L  PI +    +  NL  +        +  VA        ++   + 
Sbjct: 261 RGNQINANRVSQILPIPIELKSGKVDANLEVSYGNKKIKNLQGVARLNQVSTRIKGLPQS 320

Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
               GN       ++                      + +     LN + N   +     
Sbjct: 321 LVAEGNLMFKGRRIKFDEVTTNFGEVTG--IVKGNIDLDEG----LNLTANTQVTSIK-- 372

Query: 330 ETDFFEEEEKKNKNDDLKKD 349
             D F+  ++  KN  +   
Sbjct: 373 --DVFKTIKQDPKNMSVSGK 390


>gi|121998915|ref|YP_001003702.1| hypothetical protein Hhal_2136 [Halorhodospira halophila SL1]
 gi|121590320|gb|ABM62900.1| conserved hypothetical protein [Halorhodospira halophila SL1]
          Length = 1141

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 75/276 (27%), Gaps = 26/276 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFI-DWTDFREDFERQATLIVGKKIAVK-GGIKIHILPF 61
           RVL GL  +  V L GA  + L +          ER A+  +   + V+   +      +
Sbjct: 11  RVLRGLRPVLLVALAGAVALRLLVWLAPPLTSPVERLASQALEAPVTVERAELAWR-GVW 69

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKG 120
           P +    +R+           +E  ++    L  L  G  R                  G
Sbjct: 70  PGIELHGVRV----GDEASITLERATLTPAPLESLRAGAPRWAAASAAGVRATLVADRHG 125

Query: 121 VSNWFQRKSTMDMIHNVILE----KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
            S              + L+    ++ V    +++I +       L      I+ R    
Sbjct: 126 WSLPGLTPGGEGGEPRLDLDQMPRRLAVADAALELIPRRGA---ALESARFDIAGRRSAE 182

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
              L + S++GS           +               + ++   L  +A         
Sbjct: 183 ALQLGLRSVEGSAGL-------GRGVQLAARLPR-GDPGSATVYAALDEVAVAPW---AA 231

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
            L          G   +     +      + + + L
Sbjct: 232 ALAETWAAGTLDGQLWLEWADGRADAAHGALRANAL 267


>gi|163794304|ref|ZP_02188276.1| hypothetical protein BAL199_21594 [alpha proteobacterium BAL199]
 gi|159180472|gb|EDP64993.1| hypothetical protein BAL199_21594 [alpha proteobacterium BAL199]
          Length = 1072

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/310 (10%), Positives = 84/310 (27%), Gaps = 47/310 (15%)

Query: 30  TDFREDFERQATL-IVGKKIAVKGGIKIHILPF---PSVFFKDIRIDQKEDGSFESKIEG 85
              +   E   +    G +  V G  ++    +     V   D+ + + +     ++++ 
Sbjct: 59  DVLKPYVETMLSPPNAGFRTEV-GVTQVSWNGWNRALDVVAADVSMIEPDGSI-RARVDS 116

Query: 86  LSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI------- 138
           +++      LL+G +    + +  P +    ++ G               ++        
Sbjct: 117 IAVALSPKALLAGRLAPKRINVIDPKVTVVRTADGGWRLMPESDGPATEFDLSGLLQAFS 176

Query: 139 ----------LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI-----D 183
                     L +I + G RI+++D +         +   +      +            
Sbjct: 177 GTTPDSPLSELLEIDISGARIRLVDDQRGVSVTAQGVVAALVRTRDGLAFHGEATVAWDA 236

Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF---PLAYPIIIDLFGNLFW 240
             +  V   G     + R   +   N    +  +SL   L     ++ P+   +      
Sbjct: 237 GARTPVEWHGGYRNSSGRVDVEARLNGLPVDALVSLHPALERLRGISVPVSGAVRIATGI 296

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLEL----------------SAKKSRLSGNFKISDGNVR 284
                  S           +  L                    ++ +L G   +    V 
Sbjct: 297 TGVGLSGSAELEFGPGRVSIPGLIDRPVDLAGGTATITAGADLEQVKLDGTLDLGGPKVA 356

Query: 285 ISRYKLQSIL 294
           +S   L++  
Sbjct: 357 LSATALRAGS 366


>gi|298372777|ref|ZP_06982767.1| hypothetical protein HMPREF0156_00824 [Bacteroidetes oral taxon 274
           str. F0058]
 gi|298275681|gb|EFI17232.1| hypothetical protein HMPREF0156_00824 [Bacteroidetes oral taxon 274
           str. F0058]
          Length = 1517

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/355 (10%), Positives = 95/355 (26%), Gaps = 39/355 (10%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89
               +    + +   G K++++   K+ +  F S+    + + +  +         ++  
Sbjct: 34  DAIIQKLTAELSKKTGTKVSIE---KVSLKLFNSLSINGLYV-EDNNRDTLVYAGEVAAV 89

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF---------QRKSTMDMIHNVILE 140
              + LLS +I    + ID+  LN  +   GVSN                 + +    + 
Sbjct: 90  FSPIKLLSKKILFKKVDIDKLELNIAVDKNGVSNLDIFKKLFSSQDDNKDKEWLFVFQIN 149

Query: 141 KIHVKGGRIKIIDQE-----------SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189
            I ++       D             + +   +S++N Q     ++          K S 
Sbjct: 150 DIKLRNSHFSFRDLRRQTEEADNHFFASENIRISNINGQFVVYKIDKNY-YKGKIKKFSF 208

Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY-- 247
             +      + ++AF IT +                 +  I  +       N+ +P    
Sbjct: 209 EEQSGFRLKDLQTAFLITDSTCLVKDTKIFLPNSKISSDSIYFNFS---KLNKPKPNIGE 265

Query: 248 ------SGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
                      V       L+  +S     +S           I    L+ +     +  
Sbjct: 266 SRIAIKDLEAKVDLKDLWQLSPYISGLNGIMSAQLSAEG---YIDDINLRYLNITYGSQI 322

Query: 302 DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356
                        ++ +   A  ++        ++                  +N
Sbjct: 323 GFIGNARLAGLPQIDKTYISANIINLYGSIPAIQDLIANTTKKPAVLPQELIRLN 377


>gi|238782974|ref|ZP_04627002.1| hypothetical protein yberc0001_1270 [Yersinia bercovieri ATCC
           43970]
 gi|238716177|gb|EEQ08161.1| hypothetical protein yberc0001_1270 [Yersinia bercovieri ATCC
           43970]
          Length = 1273

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 47/335 (14%), Positives = 106/335 (31%), Gaps = 29/335 (8%)

Query: 13  FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71
            ++++ G   +   I   D+R     +   I G  + V G ++     F P++  +DI  
Sbjct: 2   VALLVSGLRMMLPLI--NDYRPQIVAKVQSISGIPLEV-GFMQGTWETFGPTLELRDISA 58

Query: 72  DQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--QRK 128
              +      +++ +++  +    LL    +  DM   Q  L+   +     N       
Sbjct: 59  KLPQAN---WQVQRVTLALDIWQSLLHWRWQFRDMTFYQLQLDLNTTLDAQQNSSRNLET 115

Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSIDS 184
             +  I    L+   ++  R+  +     +       L+ LN +   R    IS  +I+ 
Sbjct: 116 GNITDIFLRQLDHFDLRNSRVSFLTPSGPRAELEIPQLTWLNSRNRHRAEGQISLSTING 175

Query: 185 IKGSVIAEGTGNFDN---KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
             G V+     + +          + A+       IS  +            L   L   
Sbjct: 176 QHGVVMVRMDLHDNQGILNNGTVYLQADNIDLKPWISRWLHNNTGLDSAEFSLAAWLSIK 235

Query: 242 EKQPIYSGVFSVAGDFSK----LLNLELSAKKSRLSGNFKISDGNVRISRYKLQ------ 291
             + IYSG   ++   +       + +L+     L G  + +   +   +  L+      
Sbjct: 236 SGE-IYSGNVLLSQGQANWMVGDQSHQLAVDNLVLEGRRQGNGWQIDAPQLSLKTDGQSW 294

Query: 292 -SILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
                ++    +N   +  D+   L       +  
Sbjct: 295 PKGQLSALWLPENTQFIGPDQSQELRIRATNIQLE 329


>gi|313206522|ref|YP_004045699.1| asma family protein [Riemerella anatipestifer DSM 15868]
 gi|312445838|gb|ADQ82193.1| AsmA family protein [Riemerella anatipestifer DSM 15868]
 gi|315023537|gb|EFT36541.1| hypothetical protein RAYM_07114 [Riemerella anatipestifer RA-YM]
 gi|325336030|gb|ADZ12304.1| Protein of unknown function DUF490 [Riemerella anatipestifer RA-GD]
          Length = 1658

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/359 (11%), Positives = 114/359 (31%), Gaps = 23/359 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR   I LG +  ++ +  F++ + +     ++         +   I++K   ++ I  F
Sbjct: 9   LRIGAIILGSVVIILSILVFSLNIPVVQNFVKDRVVSYVETKIKTPISLK---RVCI-SF 64

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+    +    ++++      I  L +  +   LL  +     + +D    N     +G 
Sbjct: 65  PNRLGLEELYLEEKNKDTLLHINKLDVGLDIFQLLQNKADFTSIELDGLRANVKRDEQGR 124

Query: 122 SNWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
            N+             +        + L KI ++   +   D +      +   N +   
Sbjct: 125 FNFDYILDAFASNKDEEKQDSKPFILSLNKIKLQRVNVNFNDFQEGNHLKIEFNNFETKV 184

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA-NFPAKNKAISLKIQLFPLAYPI 230
           +  N+   +   +   +   +     +  + A K TA    + +    ++I+L  L +  
Sbjct: 185 KDFNLEKNIYALNGLTADGLKLRLKQEILKEAIKETAKTIDSLSAKKPMQIKLDFLRFT- 243

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
             +   +   N  Q  +  +F         ++L  +          K+    + +     
Sbjct: 244 --NFDVDYADNTTQSYFKVLFKELSGDFNNIDLPENKYDID---QIKLLGAKINVDLKSS 298

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENG-AESMHDLNETDFFEEEEKKNKNDDLKK 348
                      +N  KV   +   +  +     + +   N+     ++     + + KK
Sbjct: 299 SQNKSLQDELPENPAKVKS-KTPNVKLNLLALDDVILSYNDNAQKHQQGFDANHLNFKK 356


>gi|159043728|ref|YP_001532522.1| hypothetical protein Dshi_1179 [Dinoroseobacter shibae DFL 12]
 gi|157911488|gb|ABV92921.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
          Length = 1105

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/352 (11%), Positives = 92/352 (26%), Gaps = 48/352 (13%)

Query: 15  VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI---HILPF----PSVFFK 67
             L G+  VP         E   ++A  ++ + +  +G   +    +       P V   
Sbjct: 44  FALRGSVAVP---------EPLVQRAQAVLSRALDGRGDADLGGIELYLTEEGRPRVSLT 94

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127
            + +    D      +  L +      LL GE+R   + ++   L     + G+ +   +
Sbjct: 95  GLTLR-AADSVDSVTLPRLDVVLARRALLRGEVRPESVRLEGARLRLSRDADGLLSLAFQ 153

Query: 128 KSTMDM------------------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
                                        L ++ +    + + D    QV  LS     +
Sbjct: 154 SGGALTRVPSLPALIAEIEAVFDIPALQDLRRVTLSDLTLDLADSRLRQVVTLSGGEAVL 213

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI-----SLKIQLF 224
                 +   L++D       A             +++    A    +      +   L 
Sbjct: 214 DVSETALSLALALDLPGIGTGASLRFTTRKGDPETRVSLRMDAVPAQVLARQSPVLAPLG 273

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSV--AGDFSKLLNLELSAKKSRLSGNFKISDGN 282
             A P+     G L  + +     G  ++             L+  ++  +  +      
Sbjct: 274 VFAGPVSARFAGGLRPDGRLSALEGQLALGVGALALGGKAAPLAVSEATATWRYAPDQRR 333

Query: 283 VRISRYKLQSILPNSSTDEDNKTK------VSQDEENLLNFSENGAESMHDL 328
           + I    L +     +               +      L    + +E   D 
Sbjct: 334 MFIEDIVLDTDRLRLTGSAHGDIADGAASGSAPGGFPDLLLHADLSEIWVDP 385


>gi|172036283|ref|YP_001802784.1| hypothetical protein cce_1368 [Cyanothece sp. ATCC 51142]
 gi|171697737|gb|ACB50718.1| hypothetical protein cce_1368 [Cyanothece sp. ATCC 51142]
          Length = 1983

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/326 (12%), Positives = 103/326 (31%), Gaps = 17/326 (5%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66
           I +      ++   +    F          E+Q + ++ + + +    ++    F S+  
Sbjct: 28  IIIATTSVTLVFIGYAGLSFFLREYLPPWLEKQLSKVIYRPVEIG---ELEGFSFTSLQL 84

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126
           +D  I +  + S +   E + +    L +L       +++  +  +       G   W  
Sbjct: 85  EDAYIPETSEYSSQLTAETIKVTFNPLTILLQRKLAVNVFPQKVTVKIREKKPGQ--WLN 142

Query: 127 RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS---DLNLQISARFLNIISPLSID 183
            K+T ++I       ++VK   I ++  +S++   +    ++  + S +   +       
Sbjct: 143 VKATDEVIPLNFDLSVNVKNTEIILLPYQSEKTVNIKVAGNVEYEKSKQRKWLYDINLGL 202

Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL--KIQLFPLAYPIIIDLFGNLFWN 241
                +  +G     + +S   +  N       +S+   +        +  +L  NL   
Sbjct: 203 VESNEIELQGETFVKSTKSKISLQLNQLPLQAWLSIFPNLPFNLDESYLKANLNLNLPSL 262

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
                  G  +V  +  +     L  K  +     +  D  + I++   + IL +  T  
Sbjct: 263 RDLRETKGQGNVQLEDFQAKANSLK-KPIQADLAVQFEDNKIFINQ--GKIILGDILTTL 319

Query: 302 DNKTKVSQDEENLLNFSENGAESMHD 327
                  +      N          D
Sbjct: 320 QGYYDWQKGS----NIKIEVQNVNID 341


>gi|158333304|ref|YP_001514476.1| hypothetical protein AM1_0074 [Acaryochloris marina MBIC11017]
 gi|158303545|gb|ABW25162.1| hypothetical protein AM1_0074 [Acaryochloris marina MBIC11017]
          Length = 1736

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/295 (12%), Positives = 98/295 (33%), Gaps = 27/295 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI---- 58
           R V+     L  +++ G + +  FI+  +      ++ T  + + + +       +    
Sbjct: 25  RPVIGTALILLGILIWGGWRILGFIN-NELAPQIAKELTKSLNRPVLLGDVQSYSLTGLQ 83

Query: 59  -----LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113
                +P  +       I+ K+ G    K++ ++++ +    L       D+ +    L 
Sbjct: 84  FGPSSVPAHTYSSNGRTIEDKDAG----KVQTVNVQFDVWKALWTRTLNLDVTLVDAELY 139

Query: 114 FYLSSKGVS-NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
              +  G   +    +   + +  + L+ + V GG   +ID    +   L +L   ++  
Sbjct: 140 LDQTEDGEWISTTLTQEDSEGLVKIQLDSLSVDGGE-AVIDPYGAEARTLRNLKGVLTLH 198

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK--IQLFPLAYPI 230
             N    +      G++ + G      +      +     K K + +   +   P   PI
Sbjct: 199 DNNEKLKVEG---NGTLDSGGKARLKGEWLQPSQSLKLDVKAKQVQITPLMGFVPTEIPI 255

Query: 231 II---DLFGNLFW---NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
            I   ++ G+       ++    +G   V     ++    +  K     G   + 
Sbjct: 256 QIRSGEVDGDFQLTYQPQEPIQLTGTTEVKDADIRVPEQNIWVKAEEFQGELDVE 310


>gi|88810700|ref|ZP_01125957.1| hypothetical protein NB231_16508 [Nitrococcus mobilis Nb-231]
 gi|88792330|gb|EAR23440.1| hypothetical protein NB231_16508 [Nitrococcus mobilis Nb-231]
          Length = 360

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 71/257 (27%), Gaps = 17/257 (6%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67
            +  L  +++     +P  +               I G +  +   I IH+    +   +
Sbjct: 15  AVLTLIVLLVAVRIALPSLVL-----NYVNDTLDNIPGYQGRIA-DIDIHLWRG-AYKIQ 67

Query: 68  DIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
           +I +              + + +   +  L  G +   ++Y+ +P +NF    KG     
Sbjct: 68  NIELVKTDSPVPKPLFAADTIDLSVLWSALFRGAVVA-EVYMTKPQVNFVAGKKGQEAQT 126

Query: 126 QRKSTMDMIHN----VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                   +      + +++     G I   D  SD    +  +N   +       S   
Sbjct: 127 GEDKEWTEVAQELVPINIDRFQAVNGSIHYYDFNSDPQVDVY-INNVDAVLRNLNNSRGK 185

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP-IIIDLFGNLFW 240
                  +        ++      +  +  A     +   +L  L    I   L     +
Sbjct: 186 GKERLAKLKVHA-LAMNHADVNLNLNIDPFAAKPDFNFDFRLLHLQMTRIREYLKAYAPF 244

Query: 241 NEKQPIYSGVFSVAGDF 257
           +        V  +A   
Sbjct: 245 DANSGTLDLVVEMAAKD 261


>gi|253996558|ref|YP_003048622.1| hypothetical protein Mmol_1189 [Methylotenera mobilis JLW8]
 gi|253983237|gb|ACT48095.1| hypothetical protein Mmol_1189 [Methylotenera mobilis JLW8]
          Length = 434

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 102/273 (37%), Gaps = 37/273 (13%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI 83
           P FI    +  + E+QA+  +G  + +  G ++ +LP P V    + I +        KI
Sbjct: 12  PFFIPIKTYLNEAEKQASDKLGVSVTISSG-RLLLLPSPRVVINGVSIAENG----AIKI 66

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS----NWFQRKSTMDMIHNVIL 139
           E L++      + S   RV D++I++P +    S+ GV        ++       + V +
Sbjct: 67  EQLTVTPSLSSIFS-APRVIDIHINKPVV----SNDGVDMMLALASKKTGDNSEPNMVNV 121

Query: 140 EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN 199
             + +   ++ +          L  LN++ S    + +S +++ S  G++ A  T   D 
Sbjct: 122 RHVKIDALQLDL------PKLSLPALNVEFSLLDGHQLSAVALKSADGTLSATVTPEQDG 175

Query: 200 -------KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY----- 247
                  K+    +       N  + + ++   L  P  I++                  
Sbjct: 176 HLISVLAKKLTLPVGLPMMIDNAVLEMHLKGQRLDVP-RIEMDLYGGKVNANLDLLWHKD 234

Query: 248 ---SGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
              +G   VAG   +  +  +S K   LSG   
Sbjct: 235 WRVNGKVKVAGLSVREPSKLIS-KAVYLSGQLS 266


>gi|284039044|ref|YP_003388974.1| hypothetical protein Slin_4190 [Spirosoma linguale DSM 74]
 gi|283818337|gb|ADB40175.1| conserved hypothetical protein [Spirosoma linguale DSM 74]
          Length = 395

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 75/267 (28%), Gaps = 18/267 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++R       L  ++++    +P F+    +            G        I I ++  
Sbjct: 1   MKRATKIFIALVVLLIIARLLLPYFVL--RYVNKTLADMGSYTGH----VEDIDIQLIRG 54

Query: 62  PSVFFKDIRID--QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            +     +RI     +       I    +  E+  L  G++   ++   +P +NF  S  
Sbjct: 55  -AYQIDGLRIRKINGKIKEPFIYIPKTDLSVEWKSLFKGKLV-SEVECYEPEVNFAFSES 112

Query: 120 GVSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
             S+              +  + + +  +  GR+ +    +     LS   LQ   R + 
Sbjct: 113 EASSQTGADVDWTAYLKKLLPISINRFAIINGRVDLTSLVTQPRADLSIRKLQGEIRNIR 172

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI---QLFPLAYPIII 232
                    +   V+A G          F    N   +       +    L  +    + 
Sbjct: 173 -NVEDKNKKLPSPVVASGDVPGYGGTMNFSANMNLLKEMPDFDYNLRFTDLQLVKLNPLA 231

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSK 259
             + NL +           ++      
Sbjct: 232 KAYANLDFERGTVSVYSEMAMLNGKLN 258


>gi|70732594|ref|YP_262357.1| hypothetical protein PFL_5285 [Pseudomonas fluorescens Pf-5]
 gi|68346893|gb|AAY94499.1| Domain of Unknown Function (DUF748) family [Pseudomonas fluorescens
           Pf-5]
          Length = 976

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/278 (11%), Positives = 81/278 (29%), Gaps = 28/278 (10%)

Query: 55  KIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113
           +I + PF   +    + I +   G  +   + L    +   L    + + D+ +DQP   
Sbjct: 55  RIELNPFSLELTLWGLSIGEP--GKEQIAFDRLYANLQLDSLWKRALHLADVELDQPKTE 112

Query: 114 FYLSSKGVSNW----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL- 162
                +G  N                       V +E+I + GG +   D    +     
Sbjct: 113 ILFDKEGKLNLLALFKLPASEPTPSDPNAKPFPVRIERIKLAGGYLHFKDLRPSEPIEFL 172

Query: 163 ---SDLNLQISARFLNIISPLSIDSI---KGSVIAEGTGNFDNKRSAFKITANF------ 210
               D  L+  +   +  + +++ +     G +   G  +     S   +          
Sbjct: 173 YNKLDFELKNLSTLPDDSADMTLVATGPEGGQIDWSGNFSVTPLTSEGTLKVTDGKMKAW 232

Query: 211 -PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK 269
            P    A+ L ++   +                     S   +     +         ++
Sbjct: 233 WPYVRDAVPLVLEDGVVNLSTHYKFSLTKETELLLDNTSISVAPFAIKAPDGRPLARLER 292

Query: 270 SRLS-GNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             +S     ++  +V + + + Q +   ++ + D +  
Sbjct: 293 LDVSETTVDLAKQHVIVGKVRSQKLETWAALEADGQLD 330


>gi|300725912|ref|ZP_07059374.1| conserved hypothetical protein [Prevotella bryantii B14]
 gi|299776763|gb|EFI73311.1| conserved hypothetical protein [Prevotella bryantii B14]
          Length = 1548

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/339 (11%), Positives = 100/339 (29%), Gaps = 27/339 (7%)

Query: 2   LRRVLIGLGFLFS--VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIH 57
           ++++   +  +     +L    T+  +               A+   G +I+V G + + 
Sbjct: 1   MKKIWKWILVIVLTPFILFTIITLLFYFPPFQNWVANKVASVASEKTGMEISV-GHVSLE 59

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESK-----IEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112
                 +  ++ ++ +  D   + K        L  R + LPLL  ++ V ++ + Q  L
Sbjct: 60  F--PLDLAVENFKMIEHNDSLPQVKDTVTDASKLVARIQLLPLLKSQVEVDELRLQQVKL 117

Query: 113 NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
           N             R   +    +++   I +    +++ D +         L+  +   
Sbjct: 118 NTT-----HFIPDVRIKGVVGELSLVSHNIDLTKETLRLNDAQLLNSQLNVVLSDTVPPD 172

Query: 173 FLNIISPLSIDSIKGSVIAEG-TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
                +   +   +  V   G T +        K         K          L     
Sbjct: 173 TTPSKNFWKLFIDQVHVQKSGVTVHMPGDTIQVKAYLVDALAQKGF--------LDLKKS 224

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG-NFKISDGNVRISRYKL 290
           I   G L   +    Y   F V      + +++L+  +  +    ++     +++ +   
Sbjct: 225 IYQVGQLDVQDGHVQYDNRFKVHTQGLDVNHIDLNNLQLGVDSFYYQAPLLRLKMRKASF 284

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
           +       +       +   +  L        ES    N
Sbjct: 285 REKSGIILSKFTGPLMLDSTKILLPELELRTPESSLQAN 323


>gi|149179164|ref|ZP_01857732.1| hypothetical protein PM8797T_16882 [Planctomyces maris DSM 8797]
 gi|148841982|gb|EDL56377.1| hypothetical protein PM8797T_16882 [Planctomyces maris DSM 8797]
          Length = 1103

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/337 (11%), Positives = 99/337 (29%), Gaps = 43/337 (12%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFI--DWTDFREDFERQATLIV-GKKIAVKGGIKIHIL 59
           +     L  LFS+V+ G      +        +     + T  + G  + +    +    
Sbjct: 5   KTFQWCLLILFSLVITGGGYGYYWWMRSDEMLKAGILEKITNHIPGLMLDMD---RAQFD 61

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRV-FDMYIDQPHLNFYLSS 118
               V  +  R++          +  + +      L   +I     + +++P L     +
Sbjct: 62  FRRRVRIEGCRVNVVNHPDTIIDLPEVVVTLNQEKLARHQIIDVQKVVLNRPQLVLVRMA 121

Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ----VYFLSDLNLQISARFL 174
            G  NW      +   +   L ++ ++ G + +  +   Q         +L+L++     
Sbjct: 122 DGTWNWEGLPEPVKSDNP--LPELVIERGSLSLKFERGAQGVPTTMTFQNLDLRLIPSGT 179

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL-------------KI 221
           +        SI  +   E +G +D       I  ++       +L             ++
Sbjct: 180 SRYEIEGHTSIPQAGKLEISGYWDINTKLGSIAGSWSQLEFGPNLVRMATGISPELMNQL 239

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL---------------LNLELS 266
           +    +  +  D    ++           FS+A                      +  L 
Sbjct: 240 KTAMPSLQLKPDPATGMYDLGVSAQMDIQFSLARSSQNEPPQFQVLTHLREGKLKHPVLP 299

Query: 267 AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
                ++G   +++  + +    LQ+    +S +   
Sbjct: 300 FPLRNIAGKVLVNNQRLEVQ--NLQAFNGETSFELKG 334


>gi|282896034|ref|ZP_06304064.1| Protein of unknown function DUF490 [Raphidiopsis brookii D9]
 gi|281199073|gb|EFA73944.1| Protein of unknown function DUF490 [Raphidiopsis brookii D9]
          Length = 1838

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/340 (11%), Positives = 90/340 (26%), Gaps = 33/340 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R  I LG    ++L+G           +     ++  T  + + I +       +   
Sbjct: 1   MTRGSIALGGSVLILLMGGMWWVRGFIQKELSPLAQKSLTSTLNRPINLGAVKGFSL--- 57

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             V F    I        +  I+ + +      L+       D+ +  P +     ++  
Sbjct: 58  TGVQFAASSIPPTPTDPDKITIQAVDVSFNPWDLVVNRQIKLDVTLINPDIYIEQDNQQR 117

Query: 122 S-NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV--------YFLSDLNLQISAR 172
             +          I    L K+ V+  R+ ++  +  +           ++ L L    +
Sbjct: 118 WISTTIAPPGEPGIIKTDLSKLSVRNARLVLVPNQKPESAGSNGRLPVPVTFLGLYGRVQ 177

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK-AISLKIQLFPLAYPII 231
                   S  +    +  + TG  +       +  N   K+  +  + ++   L    I
Sbjct: 178 LFTNNQTNSSQNNIERIKFDLTGK-NQSGGDISLEGNIDTKSTVSGDVNLKTKELYIADI 236

Query: 232 IDL-FGNLFWNEKQPIYSGVFSVAGDFS------------KLLNLELSAKKSRLSGNFKI 278
           + L    L     +        +  +                   +     S   GN K 
Sbjct: 237 VGLVPAALSVKSGKINSDLKIQLTPEDPILVYGNASLEGISWQLPQTPQMFSNTQGNIKF 296

Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFS 318
               + I                      S D++   N +
Sbjct: 297 QGTGIEIDNLVSNYGKI--PLVAKG----SIDQKRGFNLT 330


>gi|159027873|emb|CAO89676.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 2045

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/326 (11%), Positives = 92/326 (28%), Gaps = 16/326 (4%)

Query: 7   IGLGFLFSVVLVGAFTVP-LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65
           +  G +  + +         ++ +       +   + ++ + + V      +      + 
Sbjct: 28  LIFGGITLLGITSLGYFTTRYLVYERLTPILDNIFSEMLHRPVRVGKIEGFYFN---RIR 84

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS--N 123
                I   ++ +    I+ + +    LPLL G     D+ +  P +       G    N
Sbjct: 85  IGKSEIPATDNSADSLSIDAIELGLNPLPLLLGLPLPVDVKLINPSIYLDQDKNGQWLDN 144

Query: 124 WFQRKSTMDMIHNVILE-KIHVKGGRIKIIDQESDQVYFL--SDLNLQISARFLNIISPL 180
             +  S +D    + L     V+ G I I          +        I  +   +    
Sbjct: 145 LEKIASNLDREALIRLNLGFQVEKGDITIQPYALKNPIEIKADGQGRFIDNQRQPLTYDF 204

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL--KIQLFPLAYPIIIDLFGNL 238
           S + +K  V  +G        S   +  +    N+ ++L  +         +  ++  N+
Sbjct: 205 SAEILKSQVKIQGETALKTGESQTNLQIDSLNLNELLTLIPRSNFQLNQGQVNANIALNI 264

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
               K     G  +           +      +L+    +    V + +         + 
Sbjct: 265 PSWAKLNQTEGNGNFQVTDL-AGKFQPFQYPIKLTTKLNLQGDKVLVEQATASIGKIKTE 323

Query: 299 TDEDNKTKVSQDEENLLNFSENGAES 324
                K +V+      L  +    + 
Sbjct: 324 V----KGEVNWQTGYHLKVALESVDL 345


>gi|86605603|ref|YP_474366.1| hypothetical protein CYA_0901 [Synechococcus sp. JA-3-3Ab]
 gi|86554145|gb|ABC99103.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab]
          Length = 1712

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/287 (12%), Positives = 83/287 (28%), Gaps = 30/287 (10%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66
           +GLG   +           F D        E   +  + +++ +    ++  +    V  
Sbjct: 133 LGLGLTAAAFGAAWGIGAYFQD--RVLPQVEATLSQAMRRQVELG---EVRFVAPWQVRL 187

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF-YLSSKGVSNWF 125
            +  I         + I  + +  +F   L     V ++ ++QP L       +G ++  
Sbjct: 188 GESHI------EHLASIGSIDLSPDFWTWLQTGEWVLNITLNQPQLLLMETLDRGWADVQ 241

Query: 126 QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
            +    +    +    I ++GG +  I     +        LQ  A+      P      
Sbjct: 242 FQLPEGEGSLPLQGLNIRLQGGSLTAI-PLVGERRRFE--QLQGQAQVWLSAPPGEEGGG 298

Query: 186 KGSVIAEGTGNF----DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
           + S                    +  A+F   + +++L  +  PL     +     L   
Sbjct: 299 RASFQLSAALRSLEGEGGYPLQLRGVADFAQASGSVTLAARRLPLELLPSVLPAAPLTEV 358

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
           E +                  L    +   L+G  ++    + + R 
Sbjct: 359 EGEASLDLQV-----------LWGGERPWELTGQAQVQQARLGLERL 394


>gi|238797927|ref|ZP_04641418.1| hypothetical protein ymoll0001_35830 [Yersinia mollaretii ATCC
           43969]
 gi|238718232|gb|EEQ10057.1| hypothetical protein ymoll0001_35830 [Yersinia mollaretii ATCC
           43969]
          Length = 1278

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 46/340 (13%), Positives = 108/340 (31%), Gaps = 29/340 (8%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFF 66
            +  + ++++ G   +   I   D+R     +   I G  + V G ++     F P++  
Sbjct: 7   TIIVVVALLVSGLRMMLPLI--NDYRPQIVAKVQSISGIPLEV-GFMQGTWETFGPTLEL 63

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
           +DI            +++ +++  +    LL    +  DM   Q  ++   +     N  
Sbjct: 64  RDISAKLPAA---YWQVQRVTLALDVWQSLLHWRWQFRDMTFYQLQMDLNTTLDEQQNSS 120

Query: 126 --QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISP 179
                  +  I    L+   ++  RI  +     +       L+ LN +   R    IS 
Sbjct: 121 RNLETGNITDIFLRQLDHFDLRNSRISFLTPSGPRAEVEIPQLTWLNSRNRHRAEGQISL 180

Query: 180 LSIDSIKGSVIAEGTGNFDN---KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
            +I+   G V+     + +          + A+       IS  +            L  
Sbjct: 181 STINGQHGVVMVRMDLHDNQGILNNGTVYMQADNIDLKPWISRWLHNNTGLDSAEFSLAA 240

Query: 237 NLFWNEKQPIYSGVFSVAGDFSK----LLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
            L     + +YSG   ++   +       + +L+     L G  + +   +   +  L++
Sbjct: 241 WLSIKSGE-VYSGNVLLSQGQANWTVADKSHQLAVDNFVLEGRRQGNGWQIDAPQLSLKT 299

Query: 293 -------ILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
                     ++    +N   +  D+   L       +  
Sbjct: 300 DGQAWPQGQLSALWLPENTQFIGPDQSQELRIRATNIQLE 339


>gi|209885122|ref|YP_002288979.1| hypothetical protein OCAR_5994 [Oligotropha carboxidovorans OM5]
 gi|209873318|gb|ACI93114.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
          Length = 1151

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 51/400 (12%), Positives = 103/400 (25%), Gaps = 83/400 (20%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLF-----IDWTDFREDFERQATLIVGKKIAVK----- 51
           LRR L   G L  V  VG F + L      I+               +G+   V+     
Sbjct: 20  LRRTLATFGVLALVFGVGFFGLWLRLGAGPINLDFVTPWLASAIEENLGRNHTVEVGGTQ 79

Query: 52  ----GGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
               G I++      +V  +DI +         +      +R   + LL G +R   + +
Sbjct: 80  IERAGRIRV------AVRLRDIVVRDANKAI-VATAPKAEVRLSGMALLFGTLRAETLRL 132

Query: 108 DQPHLNFYLSSK--------GVSNWFQRKSTMDMIHNV---------------------- 137
               L   ++          G                +                      
Sbjct: 133 VDAGLAVRITPDGEIIVSTAGTMQPLATGRVPVKPLVIAPSESTPAPASAPDETGQPQVA 192

Query: 138 -------------------------ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
                                     L +I ++ G + + DQ+S   +    +NL +   
Sbjct: 193 VASAPGLLAVMDWLDTLGSKGLDGQSLNEIGLRNGSLIVDDQQSKTEFSFEHINLSLRRP 252

Query: 173 FLNIISPLSIDSIKGSVIAE-GTGNFDNKRSAFKITANF-PAKNKAISLKIQLFPLA--- 227
               ++    +    +     G G  +N        AN  P +N  ++ +++ F      
Sbjct: 253 SSGGVTLTVGEDGPDAWSLRVGVGAPENGVRPVHFVANKVPTQNLILAARLKDFTYTTAG 312

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
            P+  ++ G +  +      +G  S+  GD       +      R             + 
Sbjct: 313 MPLSGEIKGEVGRDGLPTYLAGTLSIGKGDIIDRSTPDYPMPIDRFDVRLDWDASRRVMV 372

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
               Q     +        +             +G   + 
Sbjct: 373 AP-FQVTSGANRVTSLAHLEAPNGHTPNWQLGLSGGTIVL 411


>gi|325578667|ref|ZP_08148743.1| deoxycytidine triphosphate deaminase [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325159706|gb|EGC71837.1| deoxycytidine triphosphate deaminase [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 395

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/299 (11%), Positives = 78/299 (26%), Gaps = 41/299 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++         +VL   F    +I     +              I V     + +LP 
Sbjct: 1   MKKI----AISLLIVLFAIFAF-FYIQLNQLKNSIADHLAQ---YDIQVH-DFSLSLLPQ 51

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V    +   Q          E +  +    PL SG   + ++ I    L         
Sbjct: 52  PTVNLSGLTYHQ-------LSAENIEAKFALFPLFSGNPILEEVQITHFKL--------S 96

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                  +      +  L+ I      I    + +        L+L       N     +
Sbjct: 97  EQALNHTNIHGRFSDFSLKNIF--NQNIAFKGESAVT------LSLDKPLYGTNTQYQFA 148

Query: 182 IDSIKGSVIAEGT-------GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                 ++  +G           + +   + I           ++   L P     +   
Sbjct: 149 FSKGNINLNHQGKNLIQFVNARLNQQPLGY-IETYIDFSKPVKTVNAYLQPDCQNCLATF 207

Query: 235 FGNLFWNEKQPIYSGV-FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
             +    +    +SG  F +A   + L         +  +    +++  +    +   +
Sbjct: 208 KFSHKELQSAVNFSGKNFPMAQLIALLNFPNTLTGNTDFNIQLALTNSELTKGEFYFDA 266


>gi|149378038|ref|ZP_01895762.1| predicted membrane protein [Marinobacter algicola DG893]
 gi|149357693|gb|EDM46191.1| predicted membrane protein [Marinobacter algicola DG893]
          Length = 1243

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 64/191 (33%), Gaps = 18/191 (9%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFI--DWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPF 61
           ++  L     V++     +   I  +  ++R   E++ +  +G+ + + G +        
Sbjct: 24  LIWWLLLAVIVLMALYAGIGRQITQNINEYRSSIEQRLSSELGQPVTI-GALSSSWNWLD 82

Query: 62  PSVFFKDIRIDQKEDGSFES-KIEGLSMRAE-FLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
           P++  +DI +  + D S  +  ++ + +  +    L+   I   D   D   L    + +
Sbjct: 83  PTIVARDIVVVSENDRSDVAGSLKSVRIGLDFLASLMRLRIVFADFDADGLELTINQTPR 142

Query: 120 GVSNWFQRKSTMDMIHNVILE-----------KIHVKGGRIKIIDQESDQVY-FLSDLNL 167
           G            + +++ L             + V    + I D      +  +  L+L
Sbjct: 143 GAVTVEGVDIPDPVANDLELWLDIAGEWLSDPSVKVTRLDLGIRDANGALRHVEVPQLDL 202

Query: 168 QISARFLNIIS 178
                  +   
Sbjct: 203 IYRRGLFHASG 213


>gi|330909289|gb|EGH37803.1| putative exported protein [Escherichia coli AA86]
          Length = 1250

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 85/305 (27%), Gaps = 24/305 (7%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDI 69
               +V      +P       +R +   +     G  +     +        P++   DI
Sbjct: 2   IAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSASWQNFGPTLEAHDI 57

Query: 70  RIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQR 127
           R + K+ G     ++ +++  +    LL    +  D+   Q       S + G  N    
Sbjct: 58  RAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTSITSGGGNDSLE 115

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSID 183
            S +  +     +   ++   +  +     +       L+ LN     R   ++S  S+ 
Sbjct: 116 ASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHRAEGLVSLSSLT 175

Query: 184 SIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFW 240
              G +        D    S  ++       +    L   +Q           L G +  
Sbjct: 176 GQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIALETAQFSLEGWMTI 235

Query: 241 NEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
           ++             G          +     L+ +    +   + S       +P++  
Sbjct: 236 DKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQFS-------IPDTRI 288

Query: 300 DEDNK 304
             D K
Sbjct: 289 TMDGK 293


>gi|312885413|ref|ZP_07745054.1| AsmA family protein [Mucilaginibacter paludis DSM 18603]
 gi|311302111|gb|EFQ79139.1| AsmA family protein [Mucilaginibacter paludis DSM 18603]
          Length = 807

 Score = 57.2 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 54/409 (13%), Positives = 125/409 (30%), Gaps = 38/409 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFR--EDFERQATLIVGKKIAVKGGIKIHI- 58
           L+ VL     L  V+L+      L+I+    +       +    +  K+ + G ++    
Sbjct: 5   LKIVLKVFASLVVVILILVIAAMLYINSNKKKVLTLVTTELNKNLDGKLTI-GTMESSFF 63

Query: 59  --LPFPSVFFKDIRIDQKEDGS---FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113
              P  S+   ++ +               +   +      LL G I +  + I    ++
Sbjct: 64  KSFPGVSLSLHNVLLRDNRWPEHHHTLLDAKNFDVSVNTAALLRGTISINHIDISNAAID 123

Query: 114 FYLSSKGVSNWFQRKSTMDM--------IHNVILEKIHVKGGRIKIIDQESDQ--VYFLS 163
            Y  S G SN    K               +  L + ++K     + DQ++++   + + 
Sbjct: 124 LYTDSSGYSNTSVFKKNKQPKKANDGDANSSAELHQFNLKDVGFAVNDQKANKLFQFTIH 183

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIA-EGTGNF-DNKRSAFKITANFPAKNKAISLKI 221
            LN +++       + + +D +  S+   +  G+F  NK     + A +   +  I++  
Sbjct: 184 QLNGKMTYPDSGWHAAVHLDVLANSMAFNKANGSFIKNKTVEGDLVAGYNEDSGKINVSS 243

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR---------- 271
             F +   +   L       ++   +S   +      +  +  LSA  S+          
Sbjct: 244 DRFNIGGNL-FKLKALFVTGKRPAQFSIKLAANQITWRGASALLSANISKTLNMFNLGKP 302

Query: 272 --LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
             +                 + + + N++         + + + L   +   ++   D N
Sbjct: 303 FDVKATIAGDFEGGGSPYLNVTATVRNNTLTMPGGNIEACNFDGLYTNNNVPSQGFTDEN 362

Query: 330 ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378
                        N   K D    + N               NF    +
Sbjct: 363 SVIRLLHLTGVYNNLPFKVD----TCNIINLAKPIATGNFTSNFPLTNL 407


>gi|119470455|ref|ZP_01613183.1| hypothetical protein ATW7_18088 [Alteromonadales bacterium TW-7]
 gi|119446380|gb|EAW27656.1| hypothetical protein ATW7_18088 [Alteromonadales bacterium TW-7]
          Length = 1287

 Score = 57.2 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/331 (11%), Positives = 94/331 (28%), Gaps = 18/331 (5%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60
           R++      +  ++ V    +   + +  D++ D E          +++ G I       
Sbjct: 12  RKLWQTCAIILVLLAVIVSILKYTLPYANDYKGDIETYLDEKFAISLSI-GAISASWQGN 70

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPH-----LNF 114
            P++  +D+     E       I   S+       +   +++     I+  H      + 
Sbjct: 71  GPALVLEDLSFKDNETAPISLTIAKTSLELNLWESIKTLQLKSNYFVINGFHTTVNVADL 130

Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII-DQESDQVYFLSDLNLQISARF 173
           + S       F++K  ++ +         ++   I  + D   ++   L ++  Q     
Sbjct: 131 FESGNQDDVSFEQKELIEGLFLGNTGHFAIENSSINFVLDDNKERKLLLENIIWQNEESQ 190

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSA-----FKITANFPAKNKAISLKIQLFPLAY 228
                 L++  I      +       +          + AN    +  ++  I       
Sbjct: 191 HLGSGTLALPGITVG-TFDARIALKGESLEEVAGNMYVQANKVDVSNWLAQYINTEKQQL 249

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR-ISR 287
              I+L   L   +                       S + S   G F +         +
Sbjct: 250 TSDINLQAWLKIEKGLID-DIKMQWLPSSVTWFKEAQSQQVSLSEGGFHLYPEQGNWFLK 308

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFS 318
               +   N++T    + +    E N +  +
Sbjct: 309 STGLAFNNNNTTWPSLEFEAQLGENNQIWLN 339


>gi|237798587|ref|ZP_04587048.1| hypothetical protein POR16_07100 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331021440|gb|EGI01497.1| hypothetical protein POR16_07100 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 1271

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
           +R D E +AT  +G  +++ G ++     F P +   D+ + +   G+   +++ + +  
Sbjct: 43  YRVDVETKATSALGMPLSI-GRLEGSWSRFAPVLLAHDVMVGE---GATALRLDRVRVVP 98

Query: 91  EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149
           +    LL+ E+R+  + +D           G  NW  +   +        E++  +   +
Sbjct: 99  DLWGSLLAREVRIAHLEVDGLQFILRQDQDG--NWAVQGLPVRDDSPFDPEQVLNQVQAV 156

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208
           + +     QV     +    +A        LS+ +       +      D +  A  + +
Sbjct: 157 EHLSLLGSQVT----VQPYDAAPMTLTYVDLSLATGPYHQRLDARLTLPDGQPFALNVRS 212

Query: 209 ---NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
                  K     +   L    +   +       W+       G   ++     + +   
Sbjct: 213 RIQASQWKEGEADIYASLPQSDWAKWLPKSLTREWSLSTLQAGGEVWMSWGKGTVQSATA 272

Query: 266 SAKKSRLSGNFK 277
                ++ G + 
Sbjct: 273 RLNAPQIKGAYA 284


>gi|301058334|ref|ZP_07199367.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300447570|gb|EFK11302.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 1210

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/338 (11%), Positives = 102/338 (30%), Gaps = 50/338 (14%)

Query: 18  VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE-- 75
            G F +P  +    FR   E +A+    + + V+   ++       V  + ++       
Sbjct: 16  AGVFFMPKMVSTQWFRHQLETRASEFFHQAVTVQ---ELRWTWKDGVRIRGLKAADDPKF 72

Query: 76  DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------- 124
                  ++ L +  +F   L     +  +  D    N      G +N            
Sbjct: 73  GKEPLLSVDDLHLYVDFE--LKPARLLIQLEGDGLKANLVRKKDGHANLEEWLAQLKSSP 130

Query: 125 ----FQRKSTMDMIHNVILE---KIHVKGGRIKIIDQESDQVYFLS-------------- 163
                   S+ +    + ++   KI +   R++  D+  +++  +               
Sbjct: 131 ATSEAAPISSPNSPFVLPVDLAAKIKLTHVRVRAEDRMENRLLEIQQGALTLKMPSLLSS 190

Query: 164 --DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221
             DLN            P    ++  + +       D + +  ++    P  + A+   +
Sbjct: 191 PIDLNFNSQGSMDGKAMPPIALAVHVNHLMNEDRALDPQGTEVRVNGELPGLHTALDGTM 250

Query: 222 QLFPLAYPIIIDLFGNLF-----WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNF 276
               L   + IDL   L       ++  P  SG   +        +  ++   + +  + 
Sbjct: 251 ARKGLQGKVKIDLASFLKTAQPFLSDTLPEVSGEILLQTTAQLETDNTIAFHMNLICKSI 310

Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314
               G +R    + +    + +  +    ++S    N+
Sbjct: 311 LAKGGPLR----EKRVGPFSLTLTQKGSAELSSKTVNI 344


>gi|198284704|ref|YP_002221025.1| hypothetical protein Lferr_2624 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|198249225|gb|ACH84818.1| hypothetical protein Lferr_2624 [Acidithiobacillus ferrooxidans
           ATCC 53993]
          Length = 416

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/289 (11%), Positives = 84/289 (29%), Gaps = 21/289 (7%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKD 68
             +F ++++       F      R   E      + + + +      H       +    
Sbjct: 2   AAVFILLMLVVLGGVFFWFAGGPRYAVEEFLAGRLRQPVYLAANPGWHWGKQELRIVLPG 61

Query: 69  IRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRK 128
           +R+   +          +++   +  LL G +++  + +D P L          N     
Sbjct: 62  LRLGPTD--LPLFSASRITVALPWRALLHGRVQLQRIELDTPVL----------NAPWTG 109

Query: 129 STMDMIHNVIL-EKIHVKGGRIKIIDQESDQVYFLSDLN---LQISARFLNIISPLSIDS 184
           +       + L  ++ V+ G ++     +     L+ ++   L      L         +
Sbjct: 110 AANASGAALSLPGRVVVRDGTLRWS-GVAGHTLSLTAVHGQVLADGPSRLVGDWHWRDKT 168

Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
            +    A  T     +     +          + + I         ++       W E++
Sbjct: 169 GRWHFAAGMTSAPTLQARRISLLVGTARDPALLQVGIPTLQSVSGELVLPTMRARWQEQK 228

Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLS--GNFKISDGNVRISRYKLQ 291
              S    V      +    L+ ++  L+   +  +    V ++  KLQ
Sbjct: 229 QG-SARLDVQALHLNMAQGRLAMQQGALTVGNDLSLQIRAVALNWKKLQ 276


>gi|229588412|ref|YP_002870531.1| hypothetical protein PFLU0868 [Pseudomonas fluorescens SBW25]
 gi|229360278|emb|CAY47135.1| putative conserved exported protein [Pseudomonas fluorescens SBW25]
          Length = 1271

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 84/269 (31%), Gaps = 21/269 (7%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
           +R + E +A   V   + + G ++     F P +   D+ + +   GS   +++ + +  
Sbjct: 43  YRAEVEVKAQAAVQMPLHI-GSLEGRWSGFAPVLLAHDVMVGE---GSSALRLDQVEVVP 98

Query: 91  EFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI--LEKIHVKGG 147
           +    L   E+R+  + +    L+      G           D   +    L+++ V   
Sbjct: 99  DIWASLMAREVRIAHLQVSGLQLSVKEDKDGHWALQGLPVQDDQPLDPEQLLKRMQVVK- 157

Query: 148 RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKI 206
           R+ ++D +         L     A        LS+ +       +      D +  A  +
Sbjct: 158 RVSLLDSQVT-------LQPFDHAPVTLTYVGLSLHTGATRQRLDARLTLPDGQPLAVSL 210

Query: 207 TA---NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL 263
                    K   +   + L    +   I       W   Q    G F +      + + 
Sbjct: 211 RTRIRASQWKEGEVQAYLSLPQSDWAKWIPAKLTQQWKLTQFKAGGEFWLNWAKGTVQSA 270

Query: 264 ELSAKKSRLSGNFKISDGNVRISRYKLQS 292
            +     ++ G++      V I    L +
Sbjct: 271 VVRLNSPQVKGSY-ADRKPVHIENLALTA 298


>gi|315125439|ref|YP_004067442.1| hypothetical protein PSM_A0336 [Pseudoalteromonas sp. SM9913]
 gi|315013952|gb|ADT67290.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
          Length = 1282

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/308 (8%), Positives = 90/308 (29%), Gaps = 20/308 (6%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW-TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60
           R++      +  ++ V    +   + +  D++ D E          +++ G I       
Sbjct: 12  RKLWQISAVILVLLAVIVSILKYTLPYANDYKGDIESYLDDKFDISLSI-GAISASWQGS 70

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNFYLSSK 119
            P++  +++     +       I   S+       L   + +     I+  H    +++ 
Sbjct: 71  GPALVLEELSFKDNQTAPISLTIAKTSLELNLWESLKSLQFKSNYFVINGFHTKVNVANL 130

Query: 120 GVSNWF----QRKSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFL 174
              N      ++K  ++ +         ++   I  + +++  +   L ++  Q   +  
Sbjct: 131 FAGNQDEVSFEQKELIEGLFLGETGHFAIENSSISFVLEDNKERKLLLENIVWQNQDKQH 190

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                L++  I      +       +            +     L +Q   +     +  
Sbjct: 191 LGSGSLALPGISVG-NFDARIALKGETL----------EQMVGDLYVQANQVDVSNWLAQ 239

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
           + N    +     +    +  +   + ++++    S ++         V +S        
Sbjct: 240 YINTQKQQLHSDLNLQAWLRLEQGLVSDVKVQWLPSAVNWQLNEQTQKVSLSEGGFHLYP 299

Query: 295 PNSSTDED 302
             +S    
Sbjct: 300 EQNSWRLK 307


>gi|320104579|ref|YP_004180170.1| hypothetical protein Isop_3056 [Isosphaera pallida ATCC 43644]
 gi|319751861|gb|ADV63621.1| hypothetical protein Isop_3056 [Isosphaera pallida ATCC 43644]
          Length = 480

 Score = 56.8 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 89/306 (29%), Gaps = 51/306 (16%)

Query: 10  GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDI 69
             +  +++ G     L    T  R+   RQ     G ++ +   I   +    + + +  
Sbjct: 14  AGVAGLLIFGVGYGALVWIATVARDRIARQLEDQTGHRVELGRVIPWGLG---TFWVQGA 70

Query: 70  RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKS 129
            +      +     + +      L   S       + ++ P + F+    G  +     +
Sbjct: 71  AVTAPRTDTPWFVADSIRFERPTLGFGSQ----VKLTLNHPTMRFHRRPDGCYDPTDALA 126

Query: 130 TM--------------------------DMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
                                          + +    + ++ G ++  D +      + 
Sbjct: 127 QSHQRRAPSASPRAAVDGSSVVSFEVGRTPPNPLDDVYLEIRHGVVEWRDPDVQLDVRVE 186

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
           ++         +    +           E  G   + ++ F +  + P +++  +L+ QL
Sbjct: 187 EVEGVAFWLGSSSTVVVQ----------EAQGRLADGQARFAVQVHAPKRDQGWTLEGQL 236

Query: 224 F-------PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK-SRLSGN 275
                   P    ++  +   +  + + P  SG    A    K L+   SA+   RL G 
Sbjct: 237 QLRRVNPTPSLIKLLGRVAPVVTVSGEVPAISGPAPQAHSVPKSLDPIESARLFGRLQGE 296

Query: 276 FKISDG 281
             +   
Sbjct: 297 LYLETR 302


>gi|186477462|ref|YP_001858932.1| hypothetical protein Bphy_2714 [Burkholderia phymatum STM815]
 gi|184193921|gb|ACC71886.1| conserved hypothetical protein [Burkholderia phymatum STM815]
          Length = 380

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/277 (10%), Positives = 79/277 (28%), Gaps = 39/277 (14%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           RV+  +     +++V A     F+     +              +     I + I    +
Sbjct: 8   RVMAAIAGAIVLLVVLAAIGLYFVQRE-VKARVVDALA-----PVGTADRIDVGIS---A 58

Query: 64  VFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKG 120
           +    +R+   +D         + ++M  +    L +  + +  + +   +L    +S G
Sbjct: 59  ITLHRVRLTAPQDWPTPDALTADEITMTPDVRDYLFAHRMHLRSVVVRGFNLALVRTSSG 118

Query: 121 VSNWFQR-------------------KSTMDMIHNVILEKIHVKGGRIKIIDQ---ESDQ 158
                 +                    +   +    +++ I    GR    D+   +   
Sbjct: 119 RLEILPKLRQSMSKPAQPSSGASGAATNKPPLPAEKLIDHIAFADGRFVFYDETISKPPY 178

Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218
              +SD +  +    L  +S  +  S+KG++     G     R  F       +K+   +
Sbjct: 179 KVVVSDASASVDHIHLPDLSEPTGISMKGAI----KGPSHTGRVTFDGWMTIASKDSKTT 234

Query: 219 LKIQ-LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254
             ++ +  +     +                     A
Sbjct: 235 TTLKGVDVVTLDPYLLKKAGAKAQVTGGTLDLNLQAA 271


>gi|170719915|ref|YP_001747603.1| hypothetical protein PputW619_0729 [Pseudomonas putida W619]
 gi|169757918|gb|ACA71234.1| protein of unknown function DUF748 [Pseudomonas putida W619]
          Length = 978

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 90/308 (29%), Gaps = 31/308 (10%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKI 83
             I          +Q          ++   +I + PF   +    ++I +   G  +   
Sbjct: 24  FLIVPGVALRIANQQLAQYATLPANLQ---RIELNPFSLELTLWGLQIGEP--GKEQVGF 78

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW----------FQRKSTMDM 133
           E L        L SG + +  + +D+P      +  G  N            + +     
Sbjct: 79  ERLYANLALDSLWSGALHLQAIELDKPRNEVLFAKDGTLNLTQLFKLPASEPKPEEPASD 138

Query: 134 IHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQISARFLNIISPLSIDSIK----- 186
              + +  I +  G +   DQ   +       D+NL++            +  +      
Sbjct: 139 PFPLRIGSIKLSAGYLHFADQRPSEPIEFIYDDMNLELKNLSTLPDDNADMTLVALGPNG 198

Query: 187 GSVIAEGTGNFDN--KRSAFKITANF-----PAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
           G +   GT +      +   KIT        P    A+ L ++   +       L  +  
Sbjct: 199 GRIDWNGTLSLAPIASKGTLKITDGKMKLFWPYVRDAVPLVLEDGVVNLDTHYTLNLSKE 258

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GNFKISDGNVRISRYKLQSILPNSS 298
                   S   +     +      +      +S  +  ++   V + + + + +   ++
Sbjct: 259 TELLLDNTSVRVAPFAIKAPDGRPLVRLASLDVSETSIDLAKQLVTVGKIRSEKLETWAA 318

Query: 299 TDEDNKTK 306
            ++D +  
Sbjct: 319 LEQDGQLD 326


>gi|127512431|ref|YP_001093628.1| hypothetical protein Shew_1502 [Shewanella loihica PV-4]
 gi|126637726|gb|ABO23369.1| protein of unknown function DUF748 [Shewanella loihica PV-4]
          Length = 1119

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 49/373 (13%), Positives = 117/373 (31%), Gaps = 54/373 (14%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92
           +   +Q +  + + +++    ++ I PF   V   D  I +K D       + L +  +F
Sbjct: 49  QQIPKQLSNQIQRPVSLT---QVKINPFTLEVELTDFAIKEKND-QPFVGFKRLGLNIQF 104

Query: 93  L-PLLSGEIRVFDMYIDQPHL--------------------NFYLSSKGVSNWFQRKSTM 131
              LL   + + D+ ++ PH                         +SK            
Sbjct: 105 WDSLLQQGLSLTDITLENPHAEVKRLESDEALRFNFSDILETLAKNSKAQPEPEPEPEGG 164

Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS------------- 178
             I + IL+ + +    + ++D+ +        +NL++++   +                
Sbjct: 165 KTIPHFILKNLAIVDANLHLLDEITQGEVSYPKVNLKVASFDSHNPIVATKMSGDAAKPK 224

Query: 179 PLSIDSIKGSVIAEGTGN--------FDNKRSAFKITANFPAKNKAISLKIQ-LFPLAYP 229
           PL   S+     A    N            + A K             +++  +      
Sbjct: 225 PLEGQSLDAKNDAAQKANRYHMEFHSDRGGKIALKGQVQLTPFELVGDVRLSHIDLPQLW 284

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN--VRISR 287
             +D   ++  ++    ++  + VA D    L    SA +   S      +    + + R
Sbjct: 285 TFVDKAFHVSLDKGYVDFATEYRVAMDD-DQLEASTSAGELSFSDLLITHEQRELISLGR 343

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347
           + L  I  +    + +   ++  +   L  +    +   DL           K K+ +  
Sbjct: 344 FALSGIAADLGQQQVDVAALTSSD---LLVNARLDDKGIDLVALLAPIGNGDKAKSTETP 400

Query: 348 KDDIQYSVNKKEE 360
           K     + +++ E
Sbjct: 401 KATDNSTASEQAE 413


>gi|298209120|ref|YP_003717299.1| hypothetical protein CA2559_12788 [Croceibacter atlanticus
           HTCC2559]
 gi|83849047|gb|EAP86916.1| hypothetical protein CA2559_12788 [Croceibacter atlanticus
           HTCC2559]
          Length = 401

 Score = 56.4 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/324 (12%), Positives = 101/324 (31%), Gaps = 24/324 (7%)

Query: 12  LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71
           +  +++V    +P F+     +    +    I G    V+  I I +     V    + +
Sbjct: 27  IIVLLIVARLLLPYFV-----KNYVNKTLANIPGYYGQVE-DIDIALWRGAYV-IHGLYL 79

Query: 72  DQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY------LSSKGVSN 123
           ++ +          E   +  E+  +L G+I   ++ +  PH+N+        S  G ++
Sbjct: 80  NKLDGVTQVPFLNFEKTDISIEWDAILDGKIV-SEIEMTNPHINYVFEDQQATSEDGDAD 138

Query: 124 WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                  +  +  + + ++ V  G++  +   ++    L    + +SA  L     +   
Sbjct: 139 IDDWTKALTDLVPIDVNRLQVTNGKLAFVQLATEPNIDLYLDQVNLSATNLR---NVKEK 195

Query: 184 SIKGSVIAEGTG-NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNE 242
                        +    +   K   N   +   + + + L     P I  +   L   +
Sbjct: 196 QRILPSDVTANAISIGQGKVDLKGKINLLKQIPDMDITLSLKDANLPAINSMTSGLAGID 255

Query: 243 KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
            +   SG F V  +F+   +      K  +S    I   +        +  +        
Sbjct: 256 FE---SGTFDVYSEFAIADSYLKGYVKPLISDAKYIGKEDGIFETI-WEGFVSFFDFILT 311

Query: 303 NKTKVSQDEENLLNFSENGAESMH 326
           N +  +           +  ++  
Sbjct: 312 NPSTDNLATNVPFEGDLSATQANV 335


>gi|9106086|gb|AAF83936.1|AE003948_8 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 1251

 Score = 56.4 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/286 (10%), Positives = 75/286 (26%), Gaps = 21/286 (7%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92
           +      ++  G+ +     +        P +  + +RI           I  + +    
Sbjct: 16  QQVADWLSVRTGQPVRFD-TLNTSWTQRGPLLRLQGVRI----GPQGRMAIGEVEVLVAM 70

Query: 93  LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN---VILEKIHVKGGRI 149
              L     + ++ +    L  +  S G  + +     +          L ++ V GGR+
Sbjct: 71  YTGLLPGHSLIELRLRGMALTVHRDSAGRWSVYGLPRDVGGDPLEVLRRLGELQVIGGRL 130

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209
            +    S     LS +NL++      + + +            G  +FD       +   
Sbjct: 131 SVDAPSSGVSTTLSQINLRVRVAGDRLRAGVHGWLDSARAPVTGVVDFDRVSGDGDVYVE 190

Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI-------YSGVFS---VAGDFSK 259
                 A    +    +    + D  G++    +            G        G    
Sbjct: 191 TLPNQLASWSSLLAGVMRGVHLRDGAGHVRAWAQLHRHHVEQVTVQGDLQGVRFEGVRLA 250

Query: 260 LLNLELSAKKSRLSG--NFKISDGNVRISRYKLQSILPNSSTDEDN 303
              +       +L     ++      R+   +L+          D 
Sbjct: 251 GQTVVPRVFWPQLQALVRWQRQGDGWRVVAPRLRMGESGRLQKLDG 296


>gi|189462814|ref|ZP_03011599.1| hypothetical protein BACCOP_03512 [Bacteroides coprocola DSM 17136]
 gi|189430430|gb|EDU99414.1| hypothetical protein BACCOP_03512 [Bacteroides coprocola DSM 17136]
          Length = 1530

 Score = 56.4 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/375 (11%), Positives = 109/375 (29%), Gaps = 31/375 (8%)

Query: 2   LRRVLIGLGFLFS--VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIH 57
           +++ L   G   +   +L     + ++I            R A+   G +I++ G I + 
Sbjct: 1   MKKYLRWTGIAVASPFILFILLCILIYIPPIQNFLVNTATRYASEATGMQISI-GRISLS 59

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
                 +   +  I  K+D       + L+ + +  PLL  +I +  + + +  +N    
Sbjct: 60  F--PLDLVVNNTVIIDKQD--TILNAKKLTAKIQLTPLLRKKIELDGLELSKASVNTANL 115

Query: 118 SKGV-------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
            +G+         +             I+  + +K   + I   ++      S   +   
Sbjct: 116 IEGMTLKGNLGELFVSSHGVELDPETAIVNTLSLKDTHLSICMADTTASDTTSSQPVFWK 175

Query: 171 ARFLNIISPLSIDSIKGSV----------IAEGTGNFDNKRSAFKITANFPAKNKAISLK 220
            +  N+       +++  +                   +   +     +    N +  L 
Sbjct: 176 IQLKNVDFENVSFAMQMPLGTFSMSTSLEKLSLRNGLVDLHKSAYSAGSLKLTNGSAYLD 235

Query: 221 IQLFPLAYPIIIDLFG--NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278
               P A        G  N+  +     Y+G    A      L      +     G    
Sbjct: 236 TNTLPAAEGFDASHIGITNIKLDVDSAYYAGNDIYANIRDFNLKERSGLEIVSTKGKLVS 295

Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL---NFSENGAESMHDLNETDFFE 335
               +++   ++ +             + +  E++ +       +  ++      T   E
Sbjct: 296 DAKTLKVPSLQITTPDSYLEFSASMDWEATDAEKDGMINARLMADIGKNDLLKVITGMPE 355

Query: 336 EEEKKNKNDDLKKDD 350
           +  KK  +  L+   
Sbjct: 356 DFIKKYPSAPLQIRA 370


>gi|166367100|ref|YP_001659373.1| hypothetical protein MAE_43590 [Microcystis aeruginosa NIES-843]
 gi|166089473|dbj|BAG04181.1| hypothetical protein MAE_43590 [Microcystis aeruginosa NIES-843]
          Length = 2045

 Score = 56.4 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/325 (10%), Positives = 87/325 (26%), Gaps = 13/325 (4%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65
           LI  G     +    +    ++ +       +   + ++ + + V      +      + 
Sbjct: 28  LIVGGITLLGITSLGYFTTRYLVYERLTPILDNIFSEMLHRPVRVGKIEGFYFN---RIR 84

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS--N 123
                I    + +    I+ + +    LPLL G     D+ +  P +       G    N
Sbjct: 85  IGKSEIPATANSADSLSIDAIELGLNPLPLLLGLPLPVDVKLINPSIYLDQDKNGQWLDN 144

Query: 124 WFQRKSTMDMIHNVILE-KIHVKGGRIKIIDQESDQVYFL--SDLNLQISARFLNIISPL 180
             +  S  D    + L     V+   I I      +   +        I  +  N+    
Sbjct: 145 LDKISSNFDREAPIRLNLGFQVEKAAINIQPYALKKPIEIKADGQGRFIDNQKQNLTYDF 204

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
           S + +K  V  +G        S   +  +    ++ ++L            ++    L  
Sbjct: 205 SAEILKSQVKIQGETALKTGESLTNLQIDRLNLSELLTLIPNRNFQLNQGQVNANIALNI 264

Query: 241 NEKQPIYSGVFSVA-GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
                +     +            +      +L+    +    V + +         +  
Sbjct: 265 PSWAKLNQSQGNGNFQVTEVAGKFQPFQYPIKLTTKLNLQGDKVLVEQATATIGKIKTEV 324

Query: 300 DEDNKTKVSQDEENLLNFSENGAES 324
               + +V+      L  +    + 
Sbjct: 325 ----RGEVNWQTGYHLKVALESVDL 345


>gi|320202155|gb|EFW76730.1| hypothetical protein ECoL_00783 [Escherichia coli EC4100B]
          Length = 1250

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 84/305 (27%), Gaps = 24/305 (7%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDI 69
               +V      +P       +R +   +     G  +     +        P++   DI
Sbjct: 2   IAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSASWQNFGPTLEAHDI 57

Query: 70  RIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQR 127
           R + K+ G     ++ +++  +    LL    +  D+   Q         + G  N    
Sbjct: 58  RAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPITSGGGNDSLE 115

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSID 183
            S +  +     +   ++   +  +     +       L+ LN     R   ++S  S+ 
Sbjct: 116 ASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHRAEGLVSLSSLT 175

Query: 184 SIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFW 240
              G +        D    S  ++       +    L   +Q           L G +  
Sbjct: 176 GQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIALETAQFSLEGWMTI 235

Query: 241 NEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
           ++             G          +     L+ +    +   + S       +P++  
Sbjct: 236 DKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQFS-------IPDTRI 288

Query: 300 DEDNK 304
             D K
Sbjct: 289 TMDGK 293


>gi|320184034|gb|EFW58856.1| hypothetical protein SGF_03800 [Shigella flexneri CDC 796-83]
          Length = 1250

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 84/305 (27%), Gaps = 24/305 (7%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDI 69
               +V      +P       +R +   +     G  +     +        P++   DI
Sbjct: 2   IAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSASWQNFGPTLEAHDI 57

Query: 70  RIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQR 127
           R + K+ G     ++ +++  +    LL    +  D+   Q         + G  N    
Sbjct: 58  RAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPITSGGGNDSLE 115

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSID 183
            S +  +     +   ++   +  +     +       L+ LN     R   ++S  S+ 
Sbjct: 116 ASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHRAEGLVSLSSLT 175

Query: 184 SIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFW 240
              G +        D    S  ++       +    L   +Q           L G +  
Sbjct: 176 GQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIALETAQFSLEGWMTI 235

Query: 241 NEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
           ++             G          +     L+ +    +   + S       +P++  
Sbjct: 236 DKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQFS-------IPDTRI 288

Query: 300 DEDNK 304
             D K
Sbjct: 289 TMDGK 293


>gi|264678340|ref|YP_003278247.1| AsmA [Comamonas testosteroni CNB-2]
 gi|262208853|gb|ACY32951.1| AsmA [Comamonas testosteroni CNB-2]
          Length = 745

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/439 (9%), Positives = 107/439 (24%), Gaps = 88/439 (20%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPS------------VFFKDIRID 72
           F+DW   R     + +   G+  A+ G +++    P P             +   D+ + 
Sbjct: 55  FMDWNKLRPWINEKVSTSAGRDFAINGDLQLQWTWPQPLDTGWRHWVPGVVLHASDLTLS 114

Query: 73  QK------------EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ----------- 109
           Q             +D           +    LP            +D            
Sbjct: 115 QPQGWLVRQAPEKADDKQPVLPATPKELNTGRLPEQDQVANEKKTSVDDEDAIADAGRQP 174

Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ----------- 158
           P  +        +     +    +  +V L+ + ++   + +   +  +           
Sbjct: 175 PERDARTMITAANATASLRLWPLLARHVQLDSLLLQAPDMVLARNDKGENNWTFDKPASS 234

Query: 159 ---------VYFLSDLNLQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKR 201
                       +SD  L  S    N+      D+++          V     G     +
Sbjct: 235 GPKWSFEIGQLRISDGVLGWSDAVKNMAVRARFDTLRRPVSADQPYGVRFGLAGYLHQGK 294

Query: 202 SAFKITAN------FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255
           +  +I A          +   +   +++   A  +     G L   +          + G
Sbjct: 295 TRAQIQAQGLAGPVLDLRQDRLRFPLRISAKAGSLQAFAEGILDNPKTLDGLDFQVQIRG 354

Query: 256 DFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
                L                  RL G+        +  +++ +    +         +
Sbjct: 355 KSMADLFELSGLLLPATPPFETSGRLIGSLAPGKAVWQYEKFQGKLGQSD----LRGDLQ 410

Query: 307 VSQDE-ENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDDLK---KDDIQYSVNKKEEK 361
               +    L    +  +    DL            +K   +       +++     ++ 
Sbjct: 411 YRSAQPRPKLTAQLHSKQLRLVDLGPVIGAAPSGSPDKPQPVNGKVLPQVRFQTENWDKM 470

Query: 362 DNSHDKENQENFSGDKMIL 380
           D     E+      + + L
Sbjct: 471 DLDLRYESSHILRPEALPL 489


>gi|299532180|ref|ZP_07045574.1| AsmA family protein [Comamonas testosteroni S44]
 gi|298719842|gb|EFI60805.1| AsmA family protein [Comamonas testosteroni S44]
          Length = 745

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/439 (9%), Positives = 107/439 (24%), Gaps = 88/439 (20%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPS------------VFFKDIRID 72
           F+DW   R     + +   G+  A+ G +++    P P             +   D+ + 
Sbjct: 55  FMDWNKLRPWINEKVSTSAGRDFAINGDLQLQWTWPQPLDTGWRHWVPGVVLHASDLTLS 114

Query: 73  QK------------EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ----------- 109
           Q             +D           +    LP            +D            
Sbjct: 115 QPQGWLVRQAPEKADDKQPVLPATPKELNTGRLPEQDQVANEKKTSVDDEDAIADAGRQP 174

Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ----------- 158
           P  +        +     +    +  +V L+ + ++   + +   +  +           
Sbjct: 175 PERDARTMITAANATASLRLWPLLARHVQLDSLLLQAPDMVLARNDKGENNWTFDKPASN 234

Query: 159 ---------VYFLSDLNLQISARFLNIISPLSIDSIKGS--------VIAEGTGNFDNKR 201
                       +SD  L  S    N+      D+++          V     G     +
Sbjct: 235 GPKWSFEIGQLRISDGVLGWSDAVKNMAVRARFDTLRRPVSADQPYGVRFGLAGYLHQGK 294

Query: 202 SAFKITAN------FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255
           +  +I A          +   +   +++   A  +     G L   +          + G
Sbjct: 295 TRARIQAQGLAGPVLDLRQDRLRFPLRISANAGSLQAFAEGILDNPKTLDGLDFQVQIRG 354

Query: 256 DFSKLLNLELSAKKS---------RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
                L                  RL G+        +  +++ +    +         +
Sbjct: 355 KSMADLFELSGLLLPATPPFETSGRLIGSLAPGKAVWQYEKFQGKLGQSD----LRGDLQ 410

Query: 307 VSQDE-ENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDDLK---KDDIQYSVNKKEEK 361
               +    L    +  +    DL            +K   +       +++     ++ 
Sbjct: 411 YRSAQPRPKLTAQLHSKQLRLVDLGPVIGAAPSGSPDKPQPVNGKVLPQVRFQTENWDKM 470

Query: 362 DNSHDKENQENFSGDKMIL 380
           D     E+      + + L
Sbjct: 471 DLDLRYESSHILRPEALPL 489


>gi|320175958|gb|EFW51034.1| hypothetical protein SDB_01561 [Shigella dysenteriae CDC 74-1112]
          Length = 1250

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 84/305 (27%), Gaps = 24/305 (7%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDI 69
               +V      +P       +R +   +     G  +     +        P++   DI
Sbjct: 2   IAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSASWQNFGPTLEAHDI 57

Query: 70  RIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQR 127
           R + K+ G     ++ +++  +    LL    +  D+   Q         + G  N    
Sbjct: 58  RAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPITSGGGNDSLE 115

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSID 183
            S +  +     +   ++   +  +     +       L+ LN     R   ++S  S+ 
Sbjct: 116 ASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHRAEGLVSLSSLT 175

Query: 184 SIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFW 240
              G +        D    S  ++       +    L   +Q           L G +  
Sbjct: 176 GQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIALETAQFSLEGWMTI 235

Query: 241 NEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
           ++             G          +     L+ +    +   + S       +P++  
Sbjct: 236 DKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQFS-------IPDTRI 288

Query: 300 DEDNK 304
             D K
Sbjct: 289 TMDGK 293


>gi|325104967|ref|YP_004274621.1| protein of unknown function DUF490 [Pedobacter saltans DSM 12145]
 gi|324973815|gb|ADY52799.1| protein of unknown function DUF490 [Pedobacter saltans DSM 12145]
          Length = 1672

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 46/389 (11%), Positives = 108/389 (27%), Gaps = 38/389 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+ +   +G +  ++L     + L       +          +   + +    ++ +   
Sbjct: 9   LKIIAWIVGGIVGLILAIIILLQLPAVQNFAKNKVVSYLESKIKTPVRID---RLQLGLP 65

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             +    +   + ++       E + +      LL  ++ + ++ +     N   +   V
Sbjct: 66  KKLVLSGVYF-ESQEQDTLLAGERIGVDISLFKLLKNQVEINEIDLKGITANVVRNQDSV 124

Query: 122 SNWF-------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
            N+               +           ++KI +   +IK  D  S        LN  
Sbjct: 125 FNFDYIIKAFASEQKKEPKPEDTTSTMKFSIDKIKLDRVKIKFDDAISKNA-----LNFY 179

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
           +      I            +  +             +      +    S K        
Sbjct: 180 VGHFDTRIK-----KFDLDHLDFDVP-KITMSDLNLNLKQGIVGEIVQKSSKAVNEAANS 233

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
           PI+    G L +++ +  +    +       L  L +S  K  L G   I   ++ +   
Sbjct: 234 PILKLNLGELDFSKIRIGFDNEGTKLNTSLDLGKLLISFNKIDLDGQV-IDIRDILVKDL 292

Query: 289 KLQSIL---PNSSTDEDNKTKVSQDEENLLNFSENGAESMH---DLNETDFFEEEE---K 339
               +L     + T E  K  +       +  + + +       DLN     +  +    
Sbjct: 293 NGNLVLGKILKNKTVEVPKDTIGNTNWRAILSNADFSNINFRFDDLNSKPVTKGIDYMHM 352

Query: 340 KNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
                +LK  D  YS +       S + E
Sbjct: 353 SLSGMNLKAKDFYYSTDTISGNILSFNAE 381


>gi|254445917|ref|ZP_05059393.1| conserved domain protein [Verrucomicrobiae bacterium DG1235]
 gi|198260225|gb|EDY84533.1| conserved domain protein [Verrucomicrobiae bacterium DG1235]
          Length = 1026

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/319 (11%), Positives = 92/319 (28%), Gaps = 28/319 (8%)

Query: 3   RRVLIGLGFLFSVVL-VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R+LI    LF++ L  G + VP            ++  +  +G+++ +    +    PF
Sbjct: 13  KRILISGLVLFTLYLCFGIWGVPAI-----LVSQAQKHGSEALGREVTIG---RASFNPF 64

Query: 62  -PSVFFKDIRIDQKEDGSF-ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                  ++ I + +  S    K+  LS   +   +  G I +  + I+   +     + 
Sbjct: 65  SFETKIYNLVIAEADGKSGSLLKVGKLSANVQLSSVF-GTILLKSVEIEDSDIWITKDAA 123

Query: 120 GVSNWF-----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQE--SDQVYFLSDLN 166
           G  ++              +          + K  V    +   D    SD    L+  +
Sbjct: 124 GRLSFQDVLDGFNAEATPDEEEPSSEITAQIMKTSVDNFNLHFTDSSLPSDYEETLTIES 183

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
                        +      G        +F                     L       
Sbjct: 184 FNGRDIGTVEKVSIKSSDTGGPAY---HWDFGGVVKTASGANLAIDGGATGQLPWSFELN 240

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
           A      L     + ++  I     ++  DF+  + L     +  ++G+  ++  ++   
Sbjct: 241 ASLADFPLASLQAYIDESVIAQVEGALGFDFNAQIVLAEEGAEIVVAGDLGLNGFSISDP 300

Query: 287 RYKLQSILPNSSTDEDNKT 305
             +  ++   + +      
Sbjct: 301 EQEFVALESLTFSGLRADA 319


>gi|229592630|ref|YP_002874749.1| hypothetical protein PFLU5247 [Pseudomonas fluorescens SBW25]
 gi|229364496|emb|CAY52342.1| putative membrane protein [Pseudomonas fluorescens SBW25]
          Length = 972

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/308 (10%), Positives = 86/308 (27%), Gaps = 31/308 (10%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKI 83
             I          +Q          ++   +I   PF   V    ++I +   G  +   
Sbjct: 24  FLILPGIALRIANQQLANYATVPARIE---RIEFNPFSLEVTAWGLQIGEP--GKEQVGF 78

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----------RKSTMDM 133
           E L    +   L +  + + D+ +D+P         G  N  Q                 
Sbjct: 79  ERLYANLQIDSLWTRALHLADIQLDKPKTELLFDKSGQLNLAQLFKLPPSEPTPTDPDAK 138

Query: 134 IHNVILEKIHVKGGRIKIIDQESDQVYFL----SDLNLQISARFLNIISPLSIDSI---K 186
              + ++ I +  G +   D    +         D  L+  +      + +++ +     
Sbjct: 139 PFPLRIDSIKLAAGYVHFQDLRPSEPIEFLYDTLDFELKNLSTLPEDNADMTLVAAGPEG 198

Query: 187 GSVIAEGTGNFDNKRSAFKITANF-------PAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
           G +  +G  +     S   +           P    A+ L ++   L +           
Sbjct: 199 GQIDWKGNFSLVPITSEGTLKVTGGKMKAWWPYVRDALPLVLEDGVLNFSTEYTFSLAKE 258

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GNFKISDGNVRISRYKLQSILPNSS 298
              K    +   +     +      +  ++  +S     ++   V + + +   +   ++
Sbjct: 259 TELKLTNTAASIAPFSIKAPDGRPLVRLERLDVSETTVDLAKQQVVVGKIRSNKLETWAA 318

Query: 299 TDEDNKTK 306
            + D +  
Sbjct: 319 LEADGQLD 326


>gi|220921329|ref|YP_002496630.1| hypothetical protein Mnod_1327 [Methylobacterium nodulans ORS 2060]
 gi|219945935|gb|ACL56327.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
          Length = 599

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 91/299 (30%), Gaps = 14/299 (4%)

Query: 36  FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDI--RIDQKEDGSFESKIEGLSMRAEFL 93
            E +     G+   V+GG  + + P  +V  +D+  R D    G+    I  L +    L
Sbjct: 33  VEERLEAETGRPWTVRGGATLSLWPTVAVVVRDVGTRTDYPGVGTASLDIASLKVTGAPL 92

Query: 94  PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIID 153
            L++G   + ++ +++P L +  +    +       +         E+I V+ G + +++
Sbjct: 93  DLIAGRGLLRELEVERPVLRWP-AEWWRAGPAPGSGSGPAQPGPRPERIRVREGALLLVN 151

Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213
            E+  V  L  +  +  AR        +  +  G+         +          + P +
Sbjct: 152 GEA-TVASLEGIAAEAVARPGGFEVQATGRTGGGTCEVAAAPPGEASPGEAGKGESVPLR 210

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS 273
                 ++   PLA      + G      +     G    +G     L  +         
Sbjct: 211 FTCRLPRLGPEPLAGSADAAVHGAALTLSRLSGSLGAAPFSGAVVVDLAAKPFV------ 264

Query: 274 GNFKISDGNVRISRYK---LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
               ++   + +        + +        D + K           +   A     L 
Sbjct: 265 -RIDLASEALTLPAGAPPGAEDLDLGLLRSFDGRAKARIGALRAGGLTLTDASLDAKLT 322


>gi|46202344|ref|ZP_00053360.2| COG2982: Uncharacterized protein involved in outer membrane
           biogenesis [Magnetospirillum magnetotacticum MS-1]
          Length = 874

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 95/303 (31%), Gaps = 20/303 (6%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGL 86
           +D   +R   E +A+ ++ +K+ V G I + ILP P+V    + ++        + ++ +
Sbjct: 28  MDGDAWRGRIETEASALLRRKVTVAGPISLRILPSPAVTLAAVAVEGT------ASLDRV 81

Query: 87  SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG 146
            +      LL+G  ++ D+ ++   +   +     +        +         ++  K 
Sbjct: 82  RLGLSLGSLLAGRPQLDDVVMEGGRVGPLVDLSLRAVTTGESFAISGSA-----RLWGKS 136

Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN-KRSAFK 205
             ++   +       ++ L   +S   L   +       KG++  +   +  +  R    
Sbjct: 137 ATLEAKGRRPTSTESMAPLKAAVSLPSLESGASFDGSFGKGALSGKLDVSLASLARFTGS 196

Query: 206 ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
                   +    L++    +          +L     +   +G    +     L+++ L
Sbjct: 197 AQLPDAPLSAQAELRLSPDEVVIS-------DLGVILGESTITGSVVASLTAPALMDVTL 249

Query: 266 SAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
            A    L              +    +     ++      + S           +G  + 
Sbjct: 250 RADSFDLDSRRAAISAKTEQPKSATATTTATPASQPQQTAQPSPAASQPFELP-HGLAAN 308

Query: 326 HDL 328
            D+
Sbjct: 309 LDV 311



 Score = 39.1 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/177 (10%), Positives = 56/177 (31%), Gaps = 18/177 (10%)

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITA-----------NFPAKNKAISLKIQLFPLAY 228
           LS+ S    +  +  G      +   + A              +   A+ + ++      
Sbjct: 385 LSLGSSAAPIRGKLEGKVQLAENRLALNALTLDLDERRVTGMISAGLALPIPLKAELGLP 444

Query: 229 PIIIDLFGNLF---WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
            + +   G L     +    + +  F+ A              +  +S + + ++G + +
Sbjct: 445 GLALGFDGVLSDGRIDGGASLRAAGFAQAIRALAPGYHPRGNGELAVSAHVEGANGLITL 504

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342
           +  + ++           K  +S + +  L  +  G     D       +++ +++K
Sbjct: 505 TDLQAKAGEA----QITGKASLSLEGQPKLTANLAGNAIGLDPFLPAPNQDKGEESK 557


>gi|197287439|ref|YP_002153311.1| hypothetical protein PMI3636 [Proteus mirabilis HI4320]
 gi|194684926|emb|CAR47103.1| putative exported protein [Proteus mirabilis HI4320]
          Length = 1267

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/328 (10%), Positives = 88/328 (26%), Gaps = 27/328 (8%)

Query: 2   LRRV-----LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           ++R+     LI L  L    +V +          ++R + E   +      + +      
Sbjct: 1   MKRLSKSLLLITLFCLIIFAVVLSGFRYFLPRLDNYRPEIETYLSKQFNSPVTMTQVKGE 60

Query: 57  HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN-- 113
                P +    + ID     S E   E ++   +    LL  ++   ++  +Q  +N  
Sbjct: 61  WQNFGPDIQITGLYIDNN---SVEVSAEQITFSFDVWRSLLHFQLYFRELTFEQLAVNYK 117

Query: 114 --FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQIS 170
              +    G   +      +  I     ++  +   R   +    D     + +L     
Sbjct: 118 KPIFTGQNGDITF-TEPDDISSIFLKQFDRFKLVDSRFVFLSPSGDTSTLHIPELMWLNQ 176

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                    +++D+           ++   +    +            + +    +    
Sbjct: 177 KNRHRAQGEVTLDTPIN--------HYGGLKVRLDLYTKKQGALDKGQVFVTADEVDISP 228

Query: 231 IID--LFGNLFWNEKQPIYSGVFSVAG--DFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
            +   +  N    E +   S    ++        L +       R  G   +      I 
Sbjct: 229 WLSQWVKSNSGLGEAKASLSNWIEISNGRITGSQLQIHQGEMDWRNEGRTHVLKVEDLIL 288

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENL 314
           R + Q     +      K  +  DE   
Sbjct: 289 RMRRQENGWLADIPYTRKITMDGDEWPD 316


>gi|257093912|ref|YP_003167553.1| hypothetical protein CAP2UW1_2334 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046436|gb|ACV35624.1| hypothetical protein CAP2UW1_2334 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 625

 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/297 (9%), Positives = 82/297 (27%), Gaps = 31/297 (10%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE 84
           +F  +  +    E       G+   V G +++   P P +    + +   E      ++ 
Sbjct: 237 MFFPYALYLPAVEGALAQSTGEPAKV-GEMRVSFYPQPGLLLGKVVL-GAETEGNVVRVA 294

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV 144
            + ++     LLS  I   ++ +    L         S     +S         +  + +
Sbjct: 295 EMRLQPALATLLSPRIVFRNVQLSGIQLTAETMG---SLARMLESAARGSARAGVSHVAL 351

Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204
               I            + ++  +       ++  +S+ S   ++  E            
Sbjct: 352 DKAEISF------SGLGVDEMKGEFGLSTDGLLQSVSLHSPDRNLQLEARPIAGGVAIQL 405

Query: 205 KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE 264
           +     PA              +  +  ++ GN F  E+         + G  ++   + 
Sbjct: 406 EGLGWRPAPQSPY------LMDSLTVKGEILGNAFVIERM-----ELRIFGGLAEGTAIL 454

Query: 265 LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321
            + ++  L+G              ++ +     +     + +         + +   
Sbjct: 455 RAERQPALAGEMSFE---------RIDAKRFGEAFGIGGQFEGQAAGRLKFSATAES 502


>gi|332163142|ref|YP_004299719.1| hypothetical protein YE105_C3522 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667372|gb|ADZ44016.1| hypothetical protein YE105_C3522 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 1274

 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/308 (11%), Positives = 103/308 (33%), Gaps = 23/308 (7%)

Query: 13  FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71
            ++++ G   +   I   D+R     +   I G  + V G ++     F P++  +DIR 
Sbjct: 2   VALLVSGLRMMLPLI--NDYRPQIVAKIQSISGIPLEV-GFMQGTWETFGPTLELRDIRA 58

Query: 72  DQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSN--WFQRK 128
              +      +++ +++  +    LL    +  DM   Q  L+ + +     +       
Sbjct: 59  KLPKAD---WQVQRVTLALDVWQSLLHRRWQFRDMTFYQLQLDLHTTLDRQQSNGNSFEA 115

Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSIDSIKG 187
           ST+  I    L+   ++  RI  +     +    +  L    S+        +S+ +I G
Sbjct: 116 STITDIFLRQLDHFDLRNSRISFLTPSGPRAELEIPQLTWLNSSSRHRAEGQISLSTING 175

Query: 188 SV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
              +     +  + +                ++ +Q   +     I  + +     +   
Sbjct: 176 QHGVLMVRMDLHDNQGILS----------NGTVYMQADNIDVKPWISRWLHTNTGLESAE 225

Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN-KT 305
           +S    ++    ++ +  +  ++ + +   +     + +    L+     +    D  + 
Sbjct: 226 FSLAAWLSIKSGEIYSGNVLLRQGQANWTVEGESHQLAVDNLVLEGSRHGNGWQIDAPEL 285

Query: 306 KVSQDEEN 313
            +  D + 
Sbjct: 286 SLKTDGQP 293


>gi|332765245|gb|EGJ95472.1| putative protease [Shigella flexneri 2930-71]
          Length = 1250

 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 85/305 (27%), Gaps = 24/305 (7%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDI 69
               +V      +P       +R +   +     G  +     +        P++   DI
Sbjct: 2   IAALLVSGLRIALPHL---NAWRPEILNKIESATGMPVE-ASQLSASWQNFGPTLEAHDI 57

Query: 70  RIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQR 127
           R + K+ G     ++ +++  +    LL    +  D+   Q         + G S+    
Sbjct: 58  RAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPITSGGSDDSLE 115

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSID 183
            S +  +     +   ++   +  +     +       L+ LN     R   ++S  S+ 
Sbjct: 116 ASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHRAEGLVSLSSLT 175

Query: 184 SIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFW 240
              G +        D    S  ++       +    L   +Q           L G +  
Sbjct: 176 GQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIALETAQFSLEGWMTI 235

Query: 241 NEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
           ++             G          +     L+ +    +   + S       +P++  
Sbjct: 236 DKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQFS-------IPDTRI 288

Query: 300 DEDNK 304
             D K
Sbjct: 289 TMDGK 293


>gi|320181515|gb|EFW56433.1| hypothetical protein SGB_01386 [Shigella boydii ATCC 9905]
          Length = 1250

 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 85/305 (27%), Gaps = 24/305 (7%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDI 69
               +V      +P       +R +   +     G  +     +        P++   DI
Sbjct: 2   IAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSASWQNFGPTLEAHDI 57

Query: 70  RIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQR 127
           R + K+ G     ++ +++  +    LL    +  D+   Q         + G S+    
Sbjct: 58  RAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPVTSGGSDDSLE 115

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSID 183
            S +  +     +   ++   +  +     +       L+ LN     R   ++S  S+ 
Sbjct: 116 ASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHRAEGLVSLSSLT 175

Query: 184 SIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFW 240
              G +        D    S  +I       +    L   +Q           L G +  
Sbjct: 176 GQHGVMQVRMDLRDDEGLLSNGRIWLQADDIDLKPWLGKWMQDNIALETAQFSLEGWMTI 235

Query: 241 NEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
           ++             G          +     L+ +    +   + S       +P++  
Sbjct: 236 DKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQFS-------IPDTRI 288

Query: 300 DEDNK 304
             D K
Sbjct: 289 TMDGK 293


>gi|83643637|ref|YP_432072.1| chromosome segregation ATPase [Hahella chejuensis KCTC 2396]
 gi|83631680|gb|ABC27647.1| Chromosome segregation ATPase [Hahella chejuensis KCTC 2396]
          Length = 563

 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 74/234 (31%), Gaps = 10/234 (4%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           R L  +G++F +++V       FID    +   E + T  V  K+ V   + +   P   
Sbjct: 2   RALKFVGYIFVLLIVIVIAALFFIDI-IAKFAIEEEGTKAVKAKVEVD-SVDVRFFP-LG 58

Query: 64  VFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
                +++       +   + E +    ++ PLL  ++ V    ++    N   S  G  
Sbjct: 59  ASIYGLKVTNPQAPMTNAFEAELIDANLDWEPLLKSKVIVETAALEGMRFNTARSVTG-- 116

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                  T        L     +  ++  ID   D    L+ ++L+  +    + + LS 
Sbjct: 117 --AVPGLTPPPSQEPSLVDQFKEDMKLPAID-IPDPSELLARVDLKTVSMAKEMEASLSA 173

Query: 183 DSIKGSVIAEG-TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
                    +        +    +I A   AKN    L+               
Sbjct: 174 RKKAWKERIDALPNKETLESYKQRIKALKEAKNPLERLQAVAKVKDLQSDAKKD 227


>gi|320189592|gb|EFW64251.1| hypothetical protein ECoD_04599 [Escherichia coli O157:H7 str.
           EC1212]
          Length = 1250

 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 85/305 (27%), Gaps = 24/305 (7%)

Query: 11  FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDI 69
               +V      +P       +R +   +     G  +     +        P++   DI
Sbjct: 2   IAALLVSGLRIALPHL---DAWRPEILNKIESATGMPVE-ASQLSASWQNFGPTLEAHDI 57

Query: 70  RIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQR 127
           R + K+ G     ++ +++  +    LL    +  D+   Q         + G S+    
Sbjct: 58  RAELKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPITSGGSDDSLE 115

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSID 183
            S +  +     +   ++   +  +     +       L+ LN     R   ++S  S+ 
Sbjct: 116 ASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHRAEGLVSLSSLT 175

Query: 184 SIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFW 240
              G +        D    S  ++       +    L   +Q           L G +  
Sbjct: 176 GQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIALETAQFSLEGWMTI 235

Query: 241 NEKQPI-YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
           ++             G          +     L+ +    +   + S       +P++  
Sbjct: 236 DKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQFS-------IPDTRI 288

Query: 300 DEDNK 304
             D K
Sbjct: 289 TMDGK 293


>gi|318603974|emb|CBY25472.1| putative exported protein [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 1274

 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/308 (11%), Positives = 103/308 (33%), Gaps = 23/308 (7%)

Query: 13  FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71
            ++++ G   +   I   D+R     +   I G  + V G ++     F P++  +DIR 
Sbjct: 2   VALLVSGLRMMLPLI--NDYRPQIVAKIQSISGIPLEV-GFMQGTWETFGPTLELRDIRA 58

Query: 72  DQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSN--WFQRK 128
              +      +++ +++  +    LL    +  DM   Q  L+ + +     +       
Sbjct: 59  KLPKAD---WQVQRVTLALDVWQSLLHRRWQFRDMTFYQLQLDLHTTLDRQQSNGNSFEA 115

Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSIDSIKG 187
           ST+  I    L+   ++  RI  +     +    +  L    S+        +S+ +I G
Sbjct: 116 STITDIFLRQLDHFDLRNSRISFLTPSGPRAELEIPQLTWLNSSSRHRAEGQISLSTING 175

Query: 188 SV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
              +     +  + +                ++ +Q   +     I  + +     +   
Sbjct: 176 QHGVLMVRMDLHDNQGILS----------NGTVYMQADNIDVKPWISRWLHTNTGLESAE 225

Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN-KT 305
           +S    ++    ++ +  +  ++ + +   +     + +    L+     +    D  + 
Sbjct: 226 FSLAAWLSIKNGEIYSGNVLLRQGQANWTVEGESHQLAVDNLVLEGSRHGNGWQIDAPEL 285

Query: 306 KVSQDEEN 313
            +  D + 
Sbjct: 286 SLKTDGQP 293


>gi|325298930|ref|YP_004258847.1| hypothetical protein Bacsa_1816 [Bacteroides salanitronis DSM
           18170]
 gi|324318483|gb|ADY36374.1| protein of unknown function DUF490 [Bacteroides salanitronis DSM
           18170]
          Length = 1532

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/393 (9%), Positives = 108/393 (27%), Gaps = 29/393 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+ I +   F + ++    V L            R A+   G +I++    +I +   
Sbjct: 5   IRRLGIIVASPFILFVLICVLVYLPPIQNFLVRTATRYASEATGMQISIG---RISLGFP 61

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             +      +     G   +    L+ + + LPLL  ++ +  + +     +      G+
Sbjct: 62  LDLVVHRALVVN--QGDTIADAGRLTAKVQLLPLLKKQVELDGLELSDTRFHTADLISGM 119

Query: 122 S-------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                    +             ++ ++ +K  R+ +   ++      +   +    +  
Sbjct: 120 RLEGEIGSVFVSSHGVDLSPETAVVNQLTLKDTRLSMCLADTAAQDTAASAPVYWKFQLQ 179

Query: 175 NIISPLSIDSIKGSVIAEG------TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
            I       +++  +                  +     A           +      + 
Sbjct: 180 KIDFENVSFALQMPLDTLSMAVSLHRLALREGNADLHRMAYSARSFALEEGRFSFDTGSL 239

Query: 229 -PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK------LLNLELSAKKSRLSGNFKISDG 281
            P  + L  +        I       AG+  +       L      + +   G       
Sbjct: 240 PPAEVGLDPSHIAVTGLNIGMDSLYYAGNDIRAFIRTFELKERSGLEITSGEGRLVSDAH 299

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341
            +++  + ++       +  +    +  D  +        A  M D+ + D  +      
Sbjct: 300 ALQVPSFSIK----TQDSALELNASMDWDAMDAGKEGTVQARLMADIGKNDLLKLVTGIP 355

Query: 342 KNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374
            +   +       V    +   +  K  Q +F+
Sbjct: 356 ADFVRQYPSRPLQVRAGIDGSLNDLKLTQLSFA 388


>gi|317474879|ref|ZP_07934148.1| hypothetical protein HMPREF1016_01127 [Bacteroides eggerthii
           1_2_48FAA]
 gi|316908782|gb|EFV30467.1| hypothetical protein HMPREF1016_01127 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 1513

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/335 (12%), Positives = 105/335 (31%), Gaps = 40/335 (11%)

Query: 1   MLRRVLIGLGFLFS--VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56
           M R+ L G  ++    +VL     + L++       R+     A+   G  I+V+  I +
Sbjct: 1   MRRKWLKGALWVLLTPIVLFVILMILLYVPPVQNFIRKQATAIASDATGMNISVE-RIDL 59

Query: 57  HILPFPSVFFKDIRIDQKEDG-------SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                 ++  + +++ Q E              +  L++  +  PLL G + V  + + Q
Sbjct: 60  RF--PLNLLVRGVQVVQSEADAADVQHPDTLLNLGSLNVSVQAWPLLQGRVEVNAITLQQ 117

Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHNVILEK---------IHVKGGRIKIID------- 153
             +N     +G+             H + L+K         +     ++ + D       
Sbjct: 118 VAVNSSNLLEGMHIKGTLGRFFLESHGIDLKKEDAILNNVELSNTHMQVMLADTTETPKD 177

Query: 154 -QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212
             E+   + ++  NL++    +++  PL   +++ ++   G  + ++     K       
Sbjct: 178 STETAVNWRIALHNLKLKNVSVDLQMPLDSMALRANI---GDASIEDANLDLKRQFYGWR 234

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL------NLELS 266
           +       +         +     +        I        G     +           
Sbjct: 235 RFTLTESAVNYDLGMAAPVEGFDASHIALRDIRIGIDSVMACGRDMNAIIREFSMYDRSG 294

Query: 267 AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
              + L+G        +RI   +L++   +     
Sbjct: 295 LTVTSLTGRLFADSTLIRIPYLQLKTPHSDMDLTA 329


>gi|323137719|ref|ZP_08072795.1| hypothetical protein Met49242DRAFT_2183 [Methylocystis sp. ATCC
           49242]
 gi|322397016|gb|EFX99541.1| hypothetical protein Met49242DRAFT_2183 [Methylocystis sp. ATCC
           49242]
          Length = 1166

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 54/414 (13%), Positives = 109/414 (26%), Gaps = 70/414 (16%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTV----PLFIDWTDFREDFERQATLIVG--KKIAVK 51
           LRRV      G   L  V +   F +    PL   W             + G      + 
Sbjct: 32  LRRVATGLGLGALLLLCVSVGAFFLLLSRGPLTFSW--LAPKIVESLDELAGGRYDFQLA 89

Query: 52  GGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH 111
           G    +    P++    + +  K DG          +  +   LL G I+   + +    
Sbjct: 90  GAAIANTDHGPTLSVDGLVV--KTDGRAILAAPRAELSLDLASLLVGRIQPRRLEVLDLD 147

Query: 112 LNFYLSSKGVSNWFQRKST----------------------------------------- 130
           L   + + G                                                   
Sbjct: 148 LRLSVQADGAIAVSAGADPLATTKPAVAPTENAASPAVAPAARVALLRAAAGALRGLMDL 207

Query: 131 --MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188
                     L+++ V  GR+ I D+  D+V   +D+ L +     ++   L+       
Sbjct: 208 ATSPTSPIGALDRLGVLHGRLVIDDRTLDRVIQYNDVTLSLDKGVSSMRFSLAASGPSRR 267

Query: 189 VIAEGTGNFD-NKRSAFKIT---ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
             A         +R  F       +          +   F    P+ ++L   L  +++ 
Sbjct: 268 WAATAVAKGAPGQRRDFLAQLHDLSIDEAALIGGFRTTRFDTDAPMSLNLGFALSPDDRI 327

Query: 245 PIYSGVFSVAGDFSKLLNLE---LSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
              +G   V   F +L   +   +   +  L+ ++      V +S  +  +   + S   
Sbjct: 328 IEAAGHVEVGHGFFRLEEPDHEPVMIDRLALTASWDEEGRKVVLSPIEFAAGGFDMSIAG 387

Query: 302 DNKTKVSQ--DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353
           +           +       +       LN       E    K   ++K  +  
Sbjct: 388 EAAAPADVPAGADPG----ADAWTIALRLNRPTVVAPERAGEKIVKIEKGSLAA 437


>gi|289209149|ref|YP_003461215.1| membrane protein-like protein [Thioalkalivibrio sp. K90mix]
 gi|288944780|gb|ADC72479.1| membrane protein-like protein [Thioalkalivibrio sp. K90mix]
          Length = 1300

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/223 (10%), Positives = 62/223 (27%), Gaps = 16/223 (7%)

Query: 29  WTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLS 87
           W    E  E  A+  +G  I     I++    + P++  + + +D    G     +E L 
Sbjct: 36  WDGLDEWVETTASAQLGYPIH-TDEIELGWSGWSPALVARGVSVDL--SGEEPLHLERLR 92

Query: 88  MRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVIL-----EKI 142
           +       L        + +    +     + G  +    +  +     + +       +
Sbjct: 93  LSLSAGATLRSRFPSMQVEVAGAEVRVVREADGAIHVHGYEVGLGDGALLEIPVERWPDL 152

Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG-------TG 195
                 I   D+ +     L    L +     + +      +++G+   +          
Sbjct: 153 EASEVHITWEDRGAGLESVLDVRRLAVRTDARSRLRVFLDGAMQGAADGDFVLGVEVPDA 212

Query: 196 NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
              + R                 +++   P      + L+G +
Sbjct: 213 TARDARFFLDTQPVALGAWSPWLVRLGWEPPPGTTALRLWGEI 255


>gi|56752314|ref|YP_173015.1| hypothetical protein syc2305_c [Synechococcus elongatus PCC 6301]
 gi|81300597|ref|YP_400805.1| hypothetical protein Synpcc7942_1788 [Synechococcus elongatus PCC
           7942]
 gi|56687273|dbj|BAD80495.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81169478|gb|ABB57818.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 1568

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/332 (9%), Positives = 98/332 (29%), Gaps = 24/332 (7%)

Query: 31  DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
                 E+Q T  +G+ I +      +      V     ++            +  ++  
Sbjct: 46  WLIPQAEQQLTAALGQPIQLGNIEGWNWD---GVRLGQSQLGTVSG-PSFVSWQTTTVGI 101

Query: 91  EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIK 150
           ++  L  G +    + ++    +    S G   W+   +   +     L K+ V GG++ 
Sbjct: 102 DWAGLFQGRL-PLQLRLENVDASLQQLSNGQ--WYTFPTQAQISEYPDL-KLVVAGGKLS 157

Query: 151 IIDQESDQVYFLS--------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202
           +  + +     +          L L    R     +       +G V  E  G  + +  
Sbjct: 158 LQPRNTQNQLLVPIRLSAIAGHLQLSQEQRARFQATAQLSTGQRGWVAGEIQGGRNGEIR 217

Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLL 261
                   P   + ++  ++L  +A         +L   ++Q    +G   +     K  
Sbjct: 218 LRSQQVALPEVQRLLAQTLRLPAIAEAGTASGNLSLQLRDQQVTAINGSAQLQSATLKAT 277

Query: 262 NLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321
            + +  +  +++   +  D  + +   +  +   +            Q     L  + + 
Sbjct: 278 EVPVRLQ--QVTAALQFQDRQITVQ--RGTARWQDWRIQGQGNWTFDQGGTIQLTTTASS 333

Query: 322 AESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353
           + +    +     +         ++++    +
Sbjct: 334 STAR---SPLPGLKLGGPLQAQLNIEQAREAF 362


>gi|218129098|ref|ZP_03457902.1| hypothetical protein BACEGG_00672 [Bacteroides eggerthii DSM 20697]
 gi|217988733|gb|EEC55052.1| hypothetical protein BACEGG_00672 [Bacteroides eggerthii DSM 20697]
          Length = 1513

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/335 (12%), Positives = 104/335 (31%), Gaps = 40/335 (11%)

Query: 1   MLRRVLIGLGFLFS--VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKI 56
           M R+ L G  ++    +VL     + L++       R+     A+   G  I+V+  I +
Sbjct: 1   MRRKWLKGALWVLLTPIVLFVILMILLYVPPVQNFIRKQATAIASDATGMNISVE-RIDL 59

Query: 57  HILPFPSVFFKDIRIDQKEDG-------SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                 ++  + +++ Q E              +  L++  +  PLL G + V  + + Q
Sbjct: 60  RF--PLNLLVRGVQVVQSEADAADVQHPDTLLNLGSLNVSVQAWPLLQGRVEVNAITLQQ 117

Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHNVILEK---------IHVKGGRIKIID------- 153
             +N     +G+             H + L+K         +     ++ + D       
Sbjct: 118 VAVNSSNLLEGMHIKGTLGRFFLESHGIDLKKEDAILNNVELSNTHMQVMLADTTETPKD 177

Query: 154 -QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212
             E+   + ++  NL++    +++  PL   ++  ++   G  + ++     K       
Sbjct: 178 STETAVNWRIALHNLKLKNVSVDLQMPLDSMALGANI---GDASIEDANVDLKRQFYGWR 234

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL------NLELS 266
           +       +         +     +        I        G     +           
Sbjct: 235 RFTLTESAVNYDSGMAAPVEGFDASHIALRDIRIGIDSVMACGRDMNAIIREFSMYDRSG 294

Query: 267 AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
              + L+G        +RI   +L++   +     
Sbjct: 295 LTVTSLTGRLFADSTLIRIPYLQLKTPHSDMDLTA 329


>gi|255036770|ref|YP_003087391.1| hypothetical protein Dfer_3011 [Dyadobacter fermentans DSM 18053]
 gi|254949526|gb|ACT94226.1| conserved hypothetical protein [Dyadobacter fermentans DSM 18053]
          Length = 1532

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/332 (12%), Positives = 91/332 (27%), Gaps = 43/332 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQ----ATLIVGKKIAVKGGIKIH 57
           LR +  GL  +   VL+        +     +    +      +  +G  I + G + I 
Sbjct: 5   LRALGNGLIVVIIFVLLALGIATTALQLPSVQTWAVQHLTANVSGKLGYPITI-GRVNIK 63

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS---GEIRVFDMYIDQPHLNF 114
                 V  +++ +           +  + +      ++     EI + ++ + QP+++ 
Sbjct: 64  WFDV--VSLENVSVKDTSGAD-MIDVGRIDVNLNVNNIIRDSAKEIFLDEVNVYQPNVHL 120

Query: 115 YLSSK-GVSNWF---------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQES-- 156
            +  + G  N                 +  +  +     I+ K  V  G     D     
Sbjct: 121 VIVPQSGDLNIDGFIARINELTAPAVPRPPNAPENNTPFIIGKAKVIDGTFGYDDPRQPR 180

Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE-GTGNFDNKRSAFKITANFPA--- 212
           D+   + D +          +S   +     +  A+                        
Sbjct: 181 DRGARVFDYSHFSLRHLYGELSDFLVQGDTIAFRAKNLKTVDRQTGLEMHDLDTKFLFCQ 240

Query: 213 -KNKAISLKIQLFPLAYP----IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL---- 263
            K +   L  ++             +  G L     +    G    +   S+ L L    
Sbjct: 241 KKMELKELDARIGNSHLKNEVIFYYNRSGELGDFNHKIRMKGRLVGSRVDSRDLGLFSSY 300

Query: 264 -ELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
            +   +   +SGNF     +  +S   L    
Sbjct: 301 IDGLNESWLISGNFNGKVDDFMLSDTDLHFGK 332


>gi|152995966|ref|YP_001340801.1| membrane protein [Marinomonas sp. MWYL1]
 gi|150836890|gb|ABR70866.1| membrane protein-like protein [Marinomonas sp. MWYL1]
          Length = 1272

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/398 (10%), Positives = 115/398 (28%), Gaps = 51/398 (12%)

Query: 1   MLRRVLI-----GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIA---VKG 52
           +LR++++      + F   + +       L      +R   E     I+G  +    + G
Sbjct: 4   LLRKLILFTFWGAIAFSALLAIFAVSVGQLLPYLDHYRPQIEHNLQQIMGYPVTLEEIGG 63

Query: 53  GIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAE-FLPLLSGEIRVFDMYIDQPH 111
            ++      P+V     ++    +G     +  + +R +    LL+   +   +   +P 
Sbjct: 64  RLE---GVDPTVSISGFKLQ--ANGQSAITVNEMRVRLDTVKSLLTLSPQFTYIRFVRPK 118

Query: 112 LNFYLSSKGVSNWFQRKSTMDMIHNVILEK----------IHVKGGRIKI-IDQESDQVY 160
           +     S G         + ++ + V +E+            +    + +  DQ    + 
Sbjct: 119 VGLQ-ESDGQWRLNGATPSRNVGNEVGVERVLDYLSAQRNFSIYDAELAVNSDQFGQHLV 177

Query: 161 FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSA-FKITANFPAKNKAISL 219
            +  + +   +    + S L +D  +     +   +      + +++ A+  A   +I L
Sbjct: 178 RIPHVYIFQKSFESLLTSELYLDDYESPFHLDARIDQTRSLLSNYRVKASIKAPLFSIPL 237

Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--RLSGNFK 277
                  +Y +    FG   W +                 +   +    +    +   + 
Sbjct: 238 NDMFPENSYSLSSMEFGGDIWLDALVGKELEVRTEATQLNVAFDDGQKYEVTSSIKLRYS 297

Query: 278 ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEE 337
                VR+  + +     +                       N   +    + +      
Sbjct: 298 QKHPGVRVDVHDMLIKDKDG---------------------LNYPTTDLSFDWSSVTNRS 336

Query: 338 EKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSG 375
                  DL     + + +   E  N+    N  + +G
Sbjct: 337 NISFARADLGLAH-KIAAHFLPEDTNASKILNGLDPNG 373


>gi|108762353|ref|YP_634588.1| hypothetical protein MXAN_6465 [Myxococcus xanthus DK 1622]
 gi|108466233|gb|ABF91418.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
          Length = 1556

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/336 (10%), Positives = 92/336 (27%), Gaps = 45/336 (13%)

Query: 17  LVGAFTV-------PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDI 69
           + G              +           Q +  +       G + + +     V  +D+
Sbjct: 16  VAGVLVFATTSRGEAWLVQKGL--ALANEQLSGRLEL-----GRLDLSLS---GVILEDV 65

Query: 70  RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG--------- 120
           ++   E     + I  + +RA    L+   + +    I++P L      +G         
Sbjct: 66  KLYAPEGEL-VADIARVDVRARLAGLVRQHVNLPSARIERPRLYLAQDERGLNLTRALEP 124

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIID---QESDQVYFLSDLNLQISARFLNII 177
            +   +  S       + L ++ ++ G +       +  ++   L DL+ + SAR+    
Sbjct: 125 RTPSPEEPSQGRGSLTLDLHELVLEDGYVDFRQALPEGGERRVRLEDLDARGSARY---- 180

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
              +  +       + T +   +     +     A+ +  + +  +   A  +++D  G 
Sbjct: 181 ---AAATQGVGANLDATASLA-RPVPGPVRLALKARGEEGAFEGDVDLEAAGLVLDASGR 236

Query: 238 LFWNEKQP------IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD-GNVRISRYKL 290
                + P             +    +    L        L           +     ++
Sbjct: 237 AKLPPETPPGAPEGRLQAGLELRRLSAPPDLLRAFVPTWPLRVPVSAEGSAGLDGDAARV 296

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
                 +S     K  +  +       S    +   
Sbjct: 297 DVTAKAASASLSVKGGMDLERMRTDGLSVKARDVDL 332


>gi|238764601|ref|ZP_04625547.1| hypothetical protein ykris0001_24590 [Yersinia kristensenii ATCC
           33638]
 gi|238697191|gb|EEP89962.1| hypothetical protein ykris0001_24590 [Yersinia kristensenii ATCC
           33638]
          Length = 392

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/320 (13%), Positives = 100/320 (31%), Gaps = 37/320 (11%)

Query: 13  FSVVLVGA-FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIR 70
            ++++ G    +P      D+R     +   I G  + V G ++     F P++  +DIR
Sbjct: 2   VALLVSGLRMMLPHI---NDYRPQIVAKIQSISGIPLEV-GFMQGTWETFGPTLEMRDIR 57

Query: 71  IDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF--QR 127
               +      +++ +++  +    LL    +  DM   Q  L+   +     N      
Sbjct: 58  ATLPQAN---WQVQRVTLALDVWQSLLHWRWQFRDMTFYQLQLDLNTTLDRQQNNGNNFE 114

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSIDSIK 186
            ST+  I    L+   ++  R+  +     +    +  L    S         +S+ +I 
Sbjct: 115 ASTLTDIFLRQLDHFDLRNSRVSFLTPSGPRAELEIPQLTWLNSPSRHRAEGQISLSTIN 174

Query: 187 GSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID--LFGNLFWNEK 243
           G   +     +  + +                ++ +Q   +     I   L  N   +  
Sbjct: 175 GQHGVLMVRMDLHDNQGILS----------NGTVYMQADNIDLKPWISRWLHNNTGLDSA 224

Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
           +   +   S+        N+ LS  ++  +         + +  + L+     +    D 
Sbjct: 225 EFSLAAWLSIKSGEIYSGNVLLSQGQANWT--VGSESHQLAVDDFVLEGCRQGNGWQID- 281

Query: 304 KTKVSQDEENLLNFSENGAE 323
                      LN   +G  
Sbjct: 282 --------APELNLKTDGQS 293


>gi|86158505|ref|YP_465290.1| hypothetical protein Adeh_2083 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85775016|gb|ABC81853.1| hypothetical protein Adeh_2083 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 385

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 90/307 (29%), Gaps = 25/307 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR+ + LG L  + +     +     W   +         + G +      ++I +L   
Sbjct: 7   RRLAVALGILLVLGIAVRLALDPIATWRTRK-----VLAGLEGMRGTFS-DVEIRLL-SL 59

Query: 63  SVFFKDIRI---DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS- 118
           S     +RI       +     ++E   +      LL G +    + + +P +N  +   
Sbjct: 60  SYVIHHLRIEKVGAGGEALPYLEVERAELGVYAKELLHGHLVAG-VELRRPKMNLLVGKA 118

Query: 119 ----KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQISAR 172
               +      +    ++ +    +++  VK G +  +D    +   L    +   +   
Sbjct: 119 REGTQAAKEAPEAGRGLEALAPFRIDRAEVKDGELLWVDGREPEKPRLWFHGIEATLENF 178

Query: 173 FLNIIS---PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
                      ++ + + ++   GT +             F  +     L++        
Sbjct: 179 ATRAALARREPTVLAARATLQRSGTVSVFATADPLAKQLTFAGQGTVTGLRLAELGELLD 238

Query: 230 IIIDL---FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
              DL    G L          G  S  G    + +  L A  S L    K    +  + 
Sbjct: 239 AKTDLVPEKGTLDLYVSFRAEDGRLS-GGVRPLVKDAALKAGASGLGTRLKAMLADASLH 297

Query: 287 RYKLQSI 293
            +  +  
Sbjct: 298 LFSDERG 304


>gi|227358299|ref|ZP_03842640.1| membrane protein [Proteus mirabilis ATCC 29906]
 gi|227161635|gb|EEI46672.1| membrane protein [Proteus mirabilis ATCC 29906]
          Length = 1267

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/328 (10%), Positives = 87/328 (26%), Gaps = 27/328 (8%)

Query: 2   LRRV-----LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           ++R+     LI L  L    +V +          ++R + E   +      + +      
Sbjct: 1   MKRLSKSLLLITLFCLIIFAVVLSGFRYFLPRLDNYRPEIETYLSKQFNSPVTMTQVKGE 60

Query: 57  HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN-- 113
                P +    + ID     S E   E +    +    LL  ++   ++  +Q  +N  
Sbjct: 61  WQNFGPDIQITGLYIDNN---SVEVSAEQIIFSFDVWRSLLHFQLYFRELTFEQLAVNYK 117

Query: 114 --FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQIS 170
              +    G   +      +  I     ++  +   R   +    D     + +L     
Sbjct: 118 KPIFTGQNGDITF-TEPDDISSIFLQQFDRFKLVDSRFVFLSPSGDTSTLHIPELMWLNQ 176

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
                    +++D+           ++   +    +            + +    +    
Sbjct: 177 KNRHRAQGEVTLDTPIN--------HYGGLKVRLDLYTKKQGALDKGQVFVTADEVDISP 228

Query: 231 IID--LFGNLFWNEKQPIYSGVFSVAG--DFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
            +   +  N    E +   S    ++        L +       R  G   +      I 
Sbjct: 229 WLSQWVKSNSGLGEAKASLSNWIEISNGRITGSQLQIHQGEMDWRNEGRTHVLKVEDLIL 288

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENL 314
           R + Q     +      K  +  DE   
Sbjct: 289 RMRRQENGWLADIPYTRKITMDGDEWPD 316


>gi|313205109|ref|YP_004043766.1| hypothetical protein Palpr_2650 [Paludibacter propionicigenes WB4]
 gi|312444425|gb|ADQ80781.1| protein of unknown function DUF490 [Paludibacter propionicigenes
           WB4]
          Length = 1658

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/289 (12%), Positives = 90/289 (31%), Gaps = 24/289 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           ML+ +L   G L  + ++ A  + +               +     ++ +K    + I  
Sbjct: 11  MLKVILWMAGVLVLLFVILALIIQIPAVQNKIVHSATSFVSDKTHTRVEIK---NVSISF 67

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN-FYLSSK 119
             SV  + + ++  +          +        LL  +I +  + I+  +LN +  ++ 
Sbjct: 68  PKSVVVEGLYLEDLK-KDTLIYAGKIKANVSLYNLLFSKININSITIENLNLNAYNTNTD 126

Query: 120 GVSNWFQR-------------KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
            V N+                K          ++K+++K  R++  D  S      S   
Sbjct: 127 SVFNYNFLITAFADSTIRQENKPATSSKSTFNIDKVNLKDIRLRYDDAYSGMRVSASLGK 186

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
           L++    L+I       +                +      +         S  I++   
Sbjct: 187 LRLKVDKLDIPGAAYGINELLVEKLRVKVGLTQSKKTSTQKSEGILPQIKASG-IRINNS 245

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
           ++ +   + G   + + +      F +      L    + + +  LSG+
Sbjct: 246 SFTLEDAVNGQSVYADIR-----QFELKAGSVDLQKELIYSDRISLSGS 289


>gi|260773637|ref|ZP_05882553.1| possible exported protein [Vibrio metschnikovii CIP 69.14]
 gi|260612776|gb|EEX37979.1| possible exported protein [Vibrio metschnikovii CIP 69.14]
          Length = 1288

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 90/291 (30%), Gaps = 23/291 (7%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89
             F+++ ++        +I +           PS+  + ++ +  +    + +   + + 
Sbjct: 38  NRFKDEIQQWVGEQTQIQITIADVRGFWRNTHPSLALQGVQANLPDGSQIQLETARIDVE 97

Query: 90  AEFLPLLSGE-IRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM------------DMIHN 136
            + L         V ++ I Q +L+         N    + +             D +  
Sbjct: 98  FDLLESFRQRAPVVANLVIHQLNLDVRSVDWLAINQASDEPSSQTGDQGRILQRLDDLFL 157

Query: 137 VILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNII-----SPLSIDSIKGSVI 190
             L+   ++   I       D +   +  L+ +   R          +   I+S+K S  
Sbjct: 158 RQLDDFSIQDSTILYQTMAGDFRQLDVEKLHWKNRGRQHIAEGIISLADSEINSLKVSAH 217

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250
            +  G+  +    F I+A+       ++  +         +I     +     QP   G 
Sbjct: 218 FKDHGSLRDVSGQFYISADKLRVRPWLTRYLADATGIERGLISFNAWITLQHNQP-IDGY 276

Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKI--SDGNVRISRYKLQSILPNSST 299
             +        + E        SG  ++  ++   ++S + L+    ++  
Sbjct: 277 VELKPSELAWHDTERHELLLE-SGIVQLFPTEDGWQVSAHSLKLRTDDNPW 326


>gi|71082722|ref|YP_265441.1| hypothetical protein SAR11_0013 [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71061835|gb|AAZ20838.1| hypothetical protein SAR11_0013 [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 483

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/278 (12%), Positives = 95/278 (34%), Gaps = 26/278 (9%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF 79
              +PL  D    +     +        ++    I   ILP P    +D +I        
Sbjct: 49  YLLIPLLYDKNWIQNKVVTKLGNEFNINLSNSFDISYRILPKPHYLIRDSKIS------- 101

Query: 80  ESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI 138
            ++I+ L++        + + IR+ ++ I++ + +   ++        +    D  +   
Sbjct: 102 LAEIKTLNVFISQNNFFNKDSIRINEVVIEEANFSLLSNN-------LKPLYKDSENKFS 154

Query: 139 LEKIHVKGGRIKIIDQESD--QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196
            +KI +    I + D  ++   +  +S+  L    + L  +  L+ +             
Sbjct: 155 KKKIKINNSNIFLKDNLNEVISIIKISNAFLFFDEKNLFNLFDLNGEIFNIPFTLNYQNT 214

Query: 197 FDNKRS------AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250
            +++++        K+        K   LK  +  ++    ++   N  ++ K  I    
Sbjct: 215 INSQKNINIKAPDLKLKIIDKFFKKDEDLKSGMNNISI---LNSSINTKYSIKDQIVIFQ 271

Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
              +  ++  ++       +    N KI+  + +IS  
Sbjct: 272 SDGSRIYNSKIDYNGQLAINPFDLNLKINLYDYKISNL 309


>gi|325273350|ref|ZP_08139616.1| hypothetical protein G1E_09996 [Pseudomonas sp. TJI-51]
 gi|324101513|gb|EGB99093.1| hypothetical protein G1E_09996 [Pseudomonas sp. TJI-51]
          Length = 160

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 58/139 (41%), Gaps = 8/139 (5%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI-LP 60
           R  +G+  L +V++    ++   +     ++R D + +A   +G  + V G ++      
Sbjct: 13  RWGLGICALLAVLVALYVSLGRALIPLVAEYRADVQSKAEQALGMPVHV-GALEGRWSGL 71

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P +  +D+++ +   G+   +++ + +  +    LL+ E+R+  + +    L    + +
Sbjct: 72  APVLRVRDLQLGE---GAKALRLDEVMVVPDVWASLLAREVRLSRIQLGGLQLIVRENGQ 128

Query: 120 GVSNWFQRKSTMDMIHNVI 138
           G  N        D   N  
Sbjct: 129 GAWNLEGLPQQDDTPLNPA 147


>gi|288802928|ref|ZP_06408365.1| conserved hypothetical protein [Prevotella melaninogenica D18]
 gi|288334745|gb|EFC73183.1| conserved hypothetical protein [Prevotella melaninogenica D18]
          Length = 1490

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/369 (12%), Positives = 109/369 (29%), Gaps = 34/369 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATL----IVGKKIAVKGGIKIH 57
           ++++   + ++   +     T  + +     +    ++        +G ++ V G I + 
Sbjct: 1   MKKLRTIIRWVIWTIAGLYITTIVLLHIPAVQGFLAQKVGDVAGNKLGTEVHV-GRIDLG 59

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYL 116
            +        DI I   +          +  R +   LL  GEI +    +       Y 
Sbjct: 60  FI--NRFVLDDILIYD-QSHKKMLSASRVGARVDIWHLLRTGEINISSAQLFGLRAELYK 116

Query: 117 -SSKGVSNW-------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
            S     N+         + +T     ++ +  + ++ G IK    ++       +LN  
Sbjct: 117 TSKDAKPNFQFVLDSLASKDTTSHTPLHLSINSLVIRHGSIKYDCLDAPTTPNRLNLNHI 176

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
             +   + +    +D                +  AFK  +    K  A  LK        
Sbjct: 177 NVSDISSYLILNKLDDTSVWADL--------RALAFKEASGLEVKQLAFELKANQQQATL 228

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
              I   G       + +++  +           L  + K        K SD    +   
Sbjct: 229 RDFI-FDGTNSKIALKELFT-TYKFNNKNLDFNTLRYTIK--DFKAAIKPSDFAPILP-- 282

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
            L+ +  N ++  D +          LN S+    +     +   +    +K+   +   
Sbjct: 283 DLKPLTTNYTSTVDVEGTSQSVLVKHLNVSDQTLSTQI---KAKGWVRNIQKSPIWNFTF 339

Query: 349 DDIQYSVNK 357
             ++ S N 
Sbjct: 340 SPLKVSKNT 348


>gi|118580229|ref|YP_901479.1| hypothetical protein Ppro_1809 [Pelobacter propionicus DSM 2379]
 gi|118502939|gb|ABK99421.1| conserved hypothetical protein [Pelobacter propionicus DSM 2379]
          Length = 1189

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/330 (10%), Positives = 97/330 (29%), Gaps = 30/330 (9%)

Query: 15  VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAV-----KGGIKIHILPFPSVFFKDI 69
           +  V    + ++++ +          T  + + + V      G +         +    +
Sbjct: 28  LAAVAVLALKIYLNSSHAPRLLSAILTDYLHQTVRVATLRTDGDV---------LSLTAV 78

Query: 70  RIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127
            +    D       ++E +++  ++  LL G   +  + +    ++   +S GV N+ + 
Sbjct: 79  TLANPPDAPPGNLCRVERITVAPDWGELLRGRRSLRLLSLSGLRVDLRRNSTGVWNFSRL 138

Query: 128 KS----TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
           +            +++ +  V+ G + I  Q    +  L             I       
Sbjct: 139 QRLLGTRKPSGAELLVRRFVVRDGALTIDGQGVRGLNLLLTELTTKGTSDARIQLSFQDP 198

Query: 184 SIKGSVIAEGTGNFDNKR---SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
                    G     N+          A  PA    +   ++   L       L  N+  
Sbjct: 199 GR-NRYTLIGKLRPGNEPELDLNLSAPAISPAALAGM-FAVKDASLLKKTRAALRMNVLM 256

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI-SDGNVRISRYKLQSILPNSST 299
           +  +    G   V      L+  +    +  L+G  +  +  +    + +L+S+    + 
Sbjct: 257 HAGRLRLRGSLDVRQLPLALVTKQHPTIRP-LNGKLEFIASYDTTQDQARLKSLTLTLND 315

Query: 300 DEDNKTKVSQDEEN---LLNFSENGAESMH 326
               +   + +E       +   + A    
Sbjct: 316 RLVARASATMEEVRSAQRFSVDLDIARLDL 345


>gi|86158476|ref|YP_465261.1| AsmA [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774987|gb|ABC81824.1| AsmA [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 878

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/318 (11%), Positives = 84/318 (26%), Gaps = 41/318 (12%)

Query: 37  ERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL 96
               +  +G+ + V+      +               + +    + +E   +    L  L
Sbjct: 43  ADTLSQRLGRPVTVERVKTRLLGGVGVRVGGVSVGPGEGEDRPLATLERAEVEVNLLGAL 102

Query: 97  S---GEIRVFDMYIDQPHLNFYLSSKGVSNW-------------------FQRKSTMDMI 134
                 + V +  +D   +N      G++N                     + +     +
Sbjct: 103 LSGGKRVTVREAVVDGLRVNVVRFPDGITNLERVAKRLEETAAKEPPAQAPEGEPKPADL 162

Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
             V +++  V+  RI  +D+       L   +L +  R L    PL +      +     
Sbjct: 163 SAVRVDRAAVENARIAFLDRSVKGAEELYVDDLDVEVRDLRAGRPLEVVLKAAVLAKAQN 222

Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI----------IIDLFGNLFWNEKQ 244
                K +    T     +   + ++        P                  +      
Sbjct: 223 LELRVKAAPLPPTLVPTPEQLTLKVQPIDLGPLAPFVPGEAGFRGGRFQADLAVALGAAV 282

Query: 245 PIYSGVFSVA-GDFSKLLNLELSAKKSRLSGNFKIS------DGNVRISRYKLQSILPNS 297
           P  SG  +V  G  +  L         +L  +           G++RI + +L +     
Sbjct: 283 PGGSGRTTVKGGFRADQLAFAGQEGGKKLDASLDADLDADAEKGDLRIGKLELTAGPV-- 340

Query: 298 STDEDNKTKVSQDEENLL 315
           +          + +   +
Sbjct: 341 ALTGHGAATGLRGDAPRV 358


>gi|332186785|ref|ZP_08388527.1| hypothetical protein SUS17_1945 [Sphingomonas sp. S17]
 gi|332013118|gb|EGI55181.1| hypothetical protein SUS17_1945 [Sphingomonas sp. S17]
          Length = 1411

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 84/255 (32%), Gaps = 16/255 (6%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQA---TLIVGKKIAVKGGIKIHIL 59
           +RVL  +GF    +++    + L I+    R     Q    T   G  I V G I+  + 
Sbjct: 26  QRVLKWIGFTILGLILLVGAILLGINTDPGRRFVADQLGGYTTASGLNIKV-GRIEGSLY 84

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
              S+   D+R+   +          L++        +  I V  +  D   +      +
Sbjct: 85  GRMSLV--DLRVSDPKG--VFLSSPRLNVDWRPFAYTNNHIDVRSLSAD--LVTLARKPE 138

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
                    + +    ++ + ++ +K  R  I    + Q + L+ ++ ++          
Sbjct: 139 LKPTPSDPNAPLLPDLDIDVNRLTLK--RFVIGAPVTGQRHVLA-IDGKVHIADRRAQVT 195

Query: 180 LSIDSIKGSVIAEG---TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
            S D+++G  IA G       D    A ++  +         +   +  L  P+ + + G
Sbjct: 196 ASADALRGPGIAGGDRLRLMLDAVPDADRLAVDVKLTAPTGGVVASMAGLKAPLTLAVDG 255

Query: 237 NLFWNEKQPIYSGVF 251
              W           
Sbjct: 256 RGGWKAWNGRAIATL 270


>gi|94501794|ref|ZP_01308307.1| hypothetical protein RED65_07659 [Oceanobacter sp. RED65]
 gi|94426102|gb|EAT11097.1| hypothetical protein RED65_07659 [Oceanobacter sp. RED65]
          Length = 1277

 Score = 54.1 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/385 (10%), Positives = 115/385 (29%), Gaps = 26/385 (6%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAV---KGGIKIHILPFP 62
           L  +     + L  A    +F     +R++ E+  +  +  ++ +    G + + +   P
Sbjct: 15  LFLVAAFLLMALYSAIGQQVFPYIGQYRQNLEQFLSEQLNSQVDIRSLSGDMNVLV---P 71

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEF-LPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           S+  + I I  K        I  +       L L++ +     + +   +L+        
Sbjct: 72  SIQMEGITIAGKSARQANLSIASIDAVLNPRLSLINLKPVFDRVRLSGLYLSLGDGEPTD 131

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           S          + + ++ + + +    +   D  + ++  +    +     F  +++   
Sbjct: 132 SQNNPVGLKSLIQNLLLQQYLELNNVTVDFGDGRTVELDHV----VMTGDGFHRLMTGSV 187

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFK---ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
           +   + S+ A      +             N    N  ++  ++              ++
Sbjct: 188 VYGEEKSIRASLQLYSEGDPWDLSQFYARGNLDVANADVAYWLK-NLFDLSTFESFSPSM 246

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR-----ISRYKLQSI 293
               +       ++     S  + ++  A    ++  F +   ++        + K    
Sbjct: 247 NLGFEFKEGLLNYAKFNVSSPRVEMQDYANLKAVNTQFWVKQLSLNSWSIWFDKAKFNLK 306

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353
                 +        + ++N   +     E  +  N      + E   +  D   D ++ 
Sbjct: 307 QEPWQFENFGLNLSRKGQDNRWQYYIQDIELSYLEN---LLYDLELMPETLDETLDSLRP 363

Query: 354 SVNKKEEKDNSH---DKENQENFSG 375
             N ++     +    KE Q NF  
Sbjct: 364 QGNLRDANLIVNQSPSKETQYNFVA 388


>gi|261209927|ref|ZP_05924227.1| possible exported protein [Vibrio sp. RC341]
 gi|260840992|gb|EEX67524.1| possible exported protein [Vibrio sp. RC341]
          Length = 1280

 Score = 54.1 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/341 (10%), Positives = 100/341 (29%), Gaps = 25/341 (7%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
            +L+ L  + ++ + G   +   +    F+ + +         ++A+           PS
Sbjct: 2   WLLVSLLIVLALAVTGLRILLPQM--NRFQAEIQDWLNQNSSVQVAIADVQGYWRNTHPS 59

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN--------F 114
           +  + ++    +    +     + +  + L  L   +  + D+ ++   L+         
Sbjct: 60  LSLQTLQAHWPDSNDIQLNAASIEIEFDLLQSLWQRQPVIADLTVNGMVLDLRVIDWLAL 119

Query: 115 YLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172
             +     +   R    +D +    L+   +K   I       D +   +  L  Q    
Sbjct: 120 EQNPNPRQSRQGRVVKQLDDLLLRQLDDFSLKNSAILYRTFAGDLRQLDIDKLRWQNRGP 179

Query: 173 FLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
                  +SI          S      G+  +    F ++A+       ++  ++     
Sbjct: 180 RHFTEGVVSIAGTNINSLLVSANFTDHGSLRDVSGDFYVSADKVRVLPWLTRYLKDQTGI 239

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285
               +   G       QP+  G   +        N E   +    SG    K +    ++
Sbjct: 240 QKGQLSFNGWATLEHNQPV-DGYVELKPSELVWQNAEQRHELLLESGIVELKPTKLGWQV 298

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENL-LNFSENGAESM 325
           + + L+    ++         V+ D +      + +     
Sbjct: 299 NAHSLRLRSDDALWPL---MDVAMDWQPDQWRLNLSQLNIE 336


>gi|269793313|ref|YP_003318217.1| hypothetical protein Taci_1721 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100948|gb|ACZ19935.1| hypothetical protein Taci_1721 [Thermanaerovibrio acidaminovorans
           DSM 6589]
          Length = 1174

 Score = 54.1 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/364 (12%), Positives = 101/364 (27%), Gaps = 44/364 (12%)

Query: 2   LR--RVLIGLGFLFSVVLVGAF-TVPLFIDWTDF----REDFERQATLIVGKKIAVKGGI 54
           +R  R+L  L  LF+V+ +GA        +   +    R+         +G ++ +    
Sbjct: 1   MRGARLLALLVGLFAVIALGAVPLASALRNSDLYASRVRDALVEGVQSSLGCELELG--- 57

Query: 55  KIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            +   P      + IR+     G    + E  S+      L+ GE R+  + + +   + 
Sbjct: 58  DVSGNPIRGYEMRGIRLSTPSGGV-VLEAEEGSLHLSIPDLMRGEPRLSVVRLGRGRGDL 116

Query: 115 YLSSKGVSNWFQRKSTMDMIHNVIL-------EKIHVKGGRIKIIDQE---------SDQ 158
            L    +    +++        V         E + V   R+++ +           S  
Sbjct: 117 DLMRSLMPRGPRKERPPFDEVRVRDLVLTSSGESLSVNSARVRLPEGGYLFALSGGLSGL 176

Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218
              L     +  +        L+     G +   G       R            +    
Sbjct: 177 EVNLKGEVHRAPSGGGAWRLDLAASLGDGKISISG---VAGDRIDLAGRVTSLWIDDLRR 233

Query: 219 LKIQL-----FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS 273
           ++  L      P      +    NL  + +     G  +V         +E +       
Sbjct: 234 VRPFLPASVSLPKGIQGRVTASFNLRGSGEALAGEGEGNVRDLLVAGYLVEEAKGAWSTD 293

Query: 274 GN---FKISDGNVRISRYK------LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAES 324
           G    F+++ G V  +         L++   +     +  +               G   
Sbjct: 294 GRAVTFRVTAGRVNGAAVSGVVLVPLRTGGVSLDLKLEGVSADRWRGNLPWLEDIQGDRI 353

Query: 325 MHDL 328
             D+
Sbjct: 354 SADV 357


>gi|88799730|ref|ZP_01115304.1| hypothetical protein MED297_14155 [Reinekea sp. MED297]
 gi|88777464|gb|EAR08665.1| hypothetical protein MED297_14155 [Reinekea sp. MED297]
          Length = 1291

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/295 (8%), Positives = 85/295 (28%), Gaps = 25/295 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIK---IH 57
           R  L+ +   + +VL     +           + + E   +  +G  + + G +    + 
Sbjct: 14  RNALLKVAAFWVLVLAAYLALGRQFFPYIDRIQPEIEVWLSGQLGTPVTI-GELHGEWVR 72

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYL 116
             P   V   D+ +          ++  +++       +  G +      +         
Sbjct: 73  FNPV--VHLSDVTLGDD------IRVAQMTLAPGIYESISRGGLSFIRFELTDFQAELIE 124

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
           + +G  +      +   +    L  +  +   +  ++        +  L L      +  
Sbjct: 125 TREG-WSLQGLSGSGGRVELSELLALLQRQQEVNFVN----TRLAVRPLEL-PRFELILH 178

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA-KNKAISLKIQLFPLAYPIIIDLF 235
              L+    +  ++A  +   +      ++       +N    L ++   +     +   
Sbjct: 179 DGQLAGYGSENFLVARASIRANQIDVPIELQLETSQIQNTKNRLYLRHGTIDLSPWLQ-- 236

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
             +     +   +G + +  D S+  +L +      L+         +  + ++ 
Sbjct: 237 -EVADGIGRAEMAGEYWLNLDGSQWRDLTVRLTTESLTYAGTYDVIELNGAHFEG 290


>gi|226943398|ref|YP_002798471.1| hypothetical protein Avin_12700 [Azotobacter vinelandii DJ]
 gi|226718325|gb|ACO77496.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
          Length = 1277

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 91/304 (29%), Gaps = 28/304 (9%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKG-GIKIHILPFPSVFFKDIRIDQKEDGSFE 80
             PL  D    R + + +   ++   +A++    +   L  P +  +D+ I + ED    
Sbjct: 36  LAPLVADT---RLEVQARVRDVLDMPVAIRALEGRWTAL-SPRLLARDVTIGEGED---A 88

Query: 81  SKIEGLSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV-- 137
             +E + +R + L  LL+ E+RV  + ++         + G                   
Sbjct: 89  LHLERVQVRLDLLRTLLARELRVAALEVEGVSFTLAQDAGGRWTLEGAPQRGRQRPFNPD 148

Query: 138 -------ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG-SV 189
                   ++ + +   ++        + + L +++L + +          +    G  +
Sbjct: 149 ESLRALERIDHLSLLDSQVTFA-PHGQEPFSLQNVDLTLRSDGWRQRLDGRLILPDGQPL 207

Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                G   ++           +    +SL    +    P  +     +        +  
Sbjct: 208 QLSLHGQLADEGWRQS------SAELYVSLPQSDWASWVPRSLTGDWRIERLRAGGEFWL 261

Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
            +  +        L+    + + +G       ++ +S + L      +     +  +   
Sbjct: 262 AWDKSRLQRAAARLQAPELRIQRTGQAPAEVRDLALSGHFLSDGE--NLRALIDSLQADF 319

Query: 310 DEEN 313
            E  
Sbjct: 320 GESR 323


>gi|302877877|ref|YP_003846441.1| adenylyl cyclase class-3/4/guanylyl cyclase [Gallionella
            capsiferriformans ES-2]
 gi|302580666|gb|ADL54677.1| adenylyl cyclase class-3/4/guanylyl cyclase [Gallionella
            capsiferriformans ES-2]
          Length = 1290

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/308 (10%), Positives = 91/308 (29%), Gaps = 32/308 (10%)

Query: 20   AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF 79
             F +P  +    +  + E+  +  + + + + G +   ILP P +   ++ I      + 
Sbjct: 915  LFALPAVMPMQSYLANIEQTLSAKLQQPVHI-GRLSARILPAPRLILSEVSI----GATR 969

Query: 80   ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVIL 139
            + + +   +   +  L      +  + ++       +  + +              +  +
Sbjct: 970  QIQADQAQVNFAYSALFGATRAIDSLNLEG----VRVKDEALLQVAGWLQQTASDAHYPV 1025

Query: 140  EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN 199
             +I     R++           LS +  ++        +   +++    ++ E       
Sbjct: 1026 ARIGFTQARLE------SDSVPLSGVGGEVDFDASGHFTEAKLNADGHKLVLELHA---G 1076

Query: 200  KRSAFKIT-----ANFPAKNKAISLKIQLFPLAYPIIID-----LFGNLFWNEKQPIYSG 249
             +  F +T                LK         + I      + G +   + +  +  
Sbjct: 1077 PKLPFSLTLRDRALPLFPDWIFEDLKANGELSQDEMRISDLDGRIRGGVLTGDARINWRE 1136

Query: 250  VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
             + V G   +   + L      L G+    DG  R      +      +   +    V++
Sbjct: 1137 GWRVQGA-LEAKVIPLQNINKLLGGDL---DGTARFQMQSGRLAKLADTAVLNGVFNVNK 1192

Query: 310  DEENLLNF 317
               N ++ 
Sbjct: 1193 GIVNGVDV 1200


>gi|327481155|gb|AEA84465.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 356

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/293 (10%), Positives = 79/293 (26%), Gaps = 20/293 (6%)

Query: 53  GIKIHILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110
            + +      +   + + I++K+    +   K   + +   +  +L     V ++   QP
Sbjct: 49  DVDLVWWRG-AYRVEGLLIEKKDKRVQAPLFKAPSIDIAISWDAILRHREIVGEVVFKQP 107

Query: 111 HLNFYLSSKGVSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
           HLNF        +              +  + L +I V  G++   +  SD    +   +
Sbjct: 108 HLNFVDGGDSGDSQSGEGVDWRDQLDALVPITLNEIRVVDGQLSFRNFSSDPQVHVYASD 167

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
           +Q S   L   +  +  +   +    G   F+          +     +   + ++   +
Sbjct: 168 IQASLYNL-TNTDDADGTRTATFEGTGKL-FNQAPIEATARFDPFTDWEDFEVNLRATGV 225

Query: 227 AYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
               + DL    G   +             +              K  L           
Sbjct: 226 PLKQLNDLSRAYGKFDFAGGTGDLVVEVEASNSQL------DGYIKPLLRNVDIFDYEQD 279

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLL--NFSENGAESMHDLNETDFF 334
             +  K        +     +  +    ++        +G     D++    F
Sbjct: 280 VANEDKGFFRGLWEAVVGGGQEVLKNQRKDQFATRVELSGTTKETDVSPFQAF 332


>gi|91786026|ref|YP_546978.1| hypothetical protein Bpro_0115 [Polaromonas sp. JS666]
 gi|91695251|gb|ABE42080.1| hypothetical protein Bpro_0115 [Polaromonas sp. JS666]
          Length = 435

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 96/299 (32%), Gaps = 26/299 (8%)

Query: 21  FTVPLFIDWTD-FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF 79
             +   +   D        Q    +G K+ V G +   +LP P++  ++I   Q +    
Sbjct: 23  VAMMRLVPSDDELARRAALQLEAWLGVKVNV-GALHWRLLPAPTLVMENIITVQPQP--- 78

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-------NFYLSSKGVSNWFQRKSTMD 132
              I+ L+   + L L    +++  + +    +              G       + T  
Sbjct: 79  -IVIQKLTAYPDLLALWQRRVKMDRVDLHGATVPQLSLGWALARPEHGR------EPTES 131

Query: 133 MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE 192
            + ++ L ++  +   +  I +    V +  +++     R  + +      +    +   
Sbjct: 132 SVGDIPLARLVFRD--VTWISRHGVPVIYDGEVDFDPGWRPRHALLRRPGFTPVTDLTLT 189

Query: 193 GTGNFDNKRSAFKITANFPAKNKAIS----LKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248
             G  D   +   +          +      +  L     P  +++   L    ++ I +
Sbjct: 190 REGQDDRWAARINVGGGTAHGTVELQTRPNGRFHLEGALQPKDMEVESALAAFNRRSIVA 249

Query: 249 GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
           G  S     S   +  +   +  L      + G+ ++ R+ L   + ++  +   +T +
Sbjct: 250 GKASGNTVLSAHGDNVVELAQ-SLHTRTTFAMGSSKLLRFDLDKAIRSAGQEFAGQTAL 307


>gi|302346552|ref|YP_003814850.1| hypothetical protein HMPREF0659_A6809 [Prevotella melaninogenica
           ATCC 25845]
 gi|302150416|gb|ADK96677.1| conserved hypothetical protein [Prevotella melaninogenica ATCC
           25845]
          Length = 1708

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/381 (10%), Positives = 98/381 (25%), Gaps = 43/381 (11%)

Query: 2   LRRVLIGLGFLFS--VVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIH 57
           + R L  L  + +  V+L       L+         +      +   G ++++    +++
Sbjct: 1   MNRSLKWLVAIVATPVILFLILVALLYCPPVQNWAVKHVAAYVSDKTGMEVSID---RVN 57

Query: 58  ILPFPSVFFKDIRIDQKEDGSF-----ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112
           +          +++ +  D         + +  L    + LPLL   + V ++   +   
Sbjct: 58  LSFPLDFQLDGLKMLRPNDSIPNKKDTVADVHRLVANVDLLPLLKSRVEVNELTFTKLKA 117

Query: 113 N-------FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI-------IDQESDQ 158
           N         +            +   +  +V + K  ++GG + I        D    +
Sbjct: 118 NTVNFIGDLRIRGDLQRLHIVSHAVNLVGDSVRVNKADIEGGWVDIALGDTVPEDPNKQK 177

Query: 159 ---VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215
                 +  +NL  +   L++    ++        A   G            AN   +  
Sbjct: 178 PLWRINIDKINLTKTDFRLHMPGD-TMSVRANFKKAVANGAELLLHDNIYKVANVDWQGG 236

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY------SGVFSVAGDFSKLLNLELSAKK 269
             S        A          +                    V     K    +     
Sbjct: 237 DFSYNQNYVRHAKTGFDAAHIAMQDVNLGIDSFLYAAPKIRLRVRTANMKE---KSGLIV 293

Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
               G F +   ++ +     +      +T+   +  +  +     N  +   +    L 
Sbjct: 294 KDFRGPFSMDSTSINLRDLYFRLP----NTELSGRFMMDMNAFADKNPGQISTQLDGFLR 349

Query: 330 ETDFFEEEEKKNKNDDLKKDD 350
             D         KN      +
Sbjct: 350 LEDLHPFLTSIPKNIYQAIPN 370


>gi|271498847|ref|YP_003331872.1| hypothetical protein Dd586_0270 [Dickeya dadantii Ech586]
 gi|270342402|gb|ACZ75167.1| conserved hypothetical protein [Dickeya dadantii Ech586]
          Length = 1284

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/314 (9%), Positives = 79/314 (25%), Gaps = 43/314 (13%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFE 80
            +P       FR      A    G  + V   +      F P++   ++RI   +     
Sbjct: 35  VLPTL---DTFRPQIVAWAQSATGLPMEVD-SLSGSWETFGPTLDITNLRIHHPDAE--- 87

Query: 81  SKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNF--YLSSKGVSNWFQRKSTMDMIHNV 137
            + E +S+  +    L   + +  D+      L+    +  +           +  +   
Sbjct: 88  WQSERISVALDVWQSLLHLKWKFRDLTFYHLQLDLKTPIDPERQRTRSWEPDQLGSLFLR 147

Query: 138 ILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196
             +   ++  RI+ +     Q    +  L              +S+ S            
Sbjct: 148 QFDHFDLRNSRIRFLTPSGTQAELQIPQLTWLNGKNRHRAEGQISLSS------------ 195

Query: 197 FDNKRSAFKITANFPAKNKAIS---LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253
           F+ +    ++  +   +   ++   + +Q   +     +                G +  
Sbjct: 196 FNGQHGVVQVRMDLRDEQGWLNNGVVYLQADNIDMKPWL----------------GRWIR 239

Query: 254 AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313
           +    +     L+A      G+    D  +       +          +         +N
Sbjct: 240 SNTGLENARFSLAAWLQVREGDIYGGDLLLNQGDASWRDGDTLHQLGVNGLALHVNRYQN 299

Query: 314 LLNFSENGAESMHD 327
                        D
Sbjct: 300 GWQLDVPSLNLSTD 313


>gi|297568793|ref|YP_003690137.1| hypothetical protein DaAHT2_0814 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924708|gb|ADH85518.1| hypothetical protein DaAHT2_0814 [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 1266

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/343 (11%), Positives = 98/343 (28%), Gaps = 29/343 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M R++ + +  +  +  + A  +PL +     R D   +    +  +I++   I++  LP
Sbjct: 1   MARKIRLIVLGVLLLAALSALVLPLILRSETVRSDLADRLGYHLRSEISLD-SIELAWLP 59

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS-- 118
            P +  + + + + E       +    +   F+ LL   +    + ++ P L   L +  
Sbjct: 60  TPHLLVRGVDVQRPELS---LIMPETHVYPSFIALLQMRLEPRRVVLNDPELQLDLQARL 116

Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
            G                V + + ++     ++      +     D+   I         
Sbjct: 117 AGTEVASPAVFPRKFKGEVEISRGNLSLTSTELPGNLRLEALEFRDIEAAIKLSPTRFDL 176

Query: 179 PLSID-------SIKGSVIAEGTGNFD--NKRSAFKITANFPAKNKAISLKIQLFPL--- 226
            LS+        ++ G+ + +G        ++         P       L+         
Sbjct: 177 ELSLRPSFGRHLALSGTYLVDGNYQLQTHGRQLHLHELITTPLL-GVAPLETAADLQLQA 235

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
               +  L   L  N    +            +   + L      L+ + +     + I+
Sbjct: 236 TGKGLAKLDAALTGNLPCFLLKPQ----DIAPQAGAVRLDCGAIDLALHQREDFWQLTIN 291

Query: 287 RYKLQSILPNSSTDEDNKTKVSQD--EENLLNFSENGAESMHD 327
            +++                      +        +G E   D
Sbjct: 292 DFEVSQPQ----FRLGGVITRDSRATDSPHWEVDLHGRELNAD 330


>gi|258623374|ref|ZP_05718378.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258584340|gb|EEW09085.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 1292

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           L R+L+ L     +VL  A T    +      F+ + +         ++A+         
Sbjct: 8   LGRILMWLLVSLLIVLALAVTGLRILLPQMNRFQAEIQHWLNQNSSVQVAIADVKGYWRN 67

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113
             PS+  + ++    +    +     + +  + L  L   +  + D+ I+   L+     
Sbjct: 68  THPSLSLQALQAHWPDSNDIQLNAASIEIEFDLLQSLWERQPVIADLTINGMVLDLRAID 127

Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168
                 +     +   R    +D +    L+   +K   I       D +   +  L  Q
Sbjct: 128 WLALEQNPNPRQSRQGRVVQQLDDLLLRQLDDFTLKNSAILYRTFVGDMRQLDIEKLRWQ 187

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
            S +       +SI          S      G+  +    F ++A+       ++  ++ 
Sbjct: 188 NSGQRHFTEGVVSIAGTNINSLLVSANFRDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281
                   +           QP   G   +        N E + +    SG    K +  
Sbjct: 248 QTGIQKGQLSFNAWATLEHNQP-IDGYVELKPSELVWQNGEQNHELLLESGIVELKPTKQ 306

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
             +++ + L+ +  +          +     N    + +     
Sbjct: 307 GWQVNAHSLR-LRSDDVLWPLLDVAMDWQP-NEWRLNLSQLNID 348


>gi|154175119|ref|YP_001407535.1| transcription termination factor [Campylobacter curvus 525.92]
 gi|112803852|gb|EAU01196.1| transcription termination factor [Campylobacter curvus 525.92]
          Length = 1081

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/371 (11%), Positives = 109/371 (29%), Gaps = 36/371 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           +++ I    + + +L+       +      +     +    +   +++    ++   P+ 
Sbjct: 5   KKIAIITSCVVAALLLIYTLFGFYGVPYILKNVVPNKLKE-MNVSLSLN---EVKFNPY- 59

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +    ++   +    S     E + ++ +   +    I V  + +++P +          
Sbjct: 60  TFEL-NVTKPELNTTSPLFSGEQIDVKLKPFLIFKKLIAVDILRLEKPDIRISRDKNASL 118

Query: 123 NWFQRKSTMDMIH------NVILEKIHVKGGRIKIIDQESDQVYFL--SDLNLQISARFL 174
           N     S  +         N  L    +  G     D+     + +  +D+N +IS    
Sbjct: 119 NLAPFLSDSNNTSEEKSSLNFALNTAKIVKGSFGYSDENLTHPFNVKFNDINYEISGINT 178

Query: 175 -----NIISPLSIDSIKGSVIAEGTGNFDNKR---------SAFKITANFPAKNKAISLK 220
                   S  S  S+   +  +G  +    R          + K  A     ++++ +K
Sbjct: 179 ELNSIGKHSFDSNSSLAQKIDWQGGVDISPLRIYGVLKINEFSIKPVAISFIDDQSLQIK 238

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS-AKKSRLSGNFKIS 279
             +        +    N    + +  +           +  N++ S      +  +  IS
Sbjct: 239 NMIIDTKLDYELAADKNATSIKLKDSF-LTLKALEAVLENQNMKFSELSIPNIVFDATIS 297

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339
           D      +  L +I     + E     VS + +  LN S     +  D N +        
Sbjct: 298 DKRDL--KLNLDTIALKEPSFEGG---VSLNTK-ELNLSGLALHANIDENSSLSLNTALN 351

Query: 340 KNKNDDLKKDD 350
                 +    
Sbjct: 352 SAYISAVSLGQ 362


>gi|83311967|ref|YP_422231.1| hypothetical protein amb2868 [Magnetospirillum magneticum AMB-1]
 gi|82946808|dbj|BAE51672.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
          Length = 252

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/223 (12%), Positives = 74/223 (33%), Gaps = 7/223 (3%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R++LIG G L +VV+  A  +   +D    ++  E   + + G K++V G +KI +   
Sbjct: 1   MRKLLIGAGVLVTVVIGAAVFLLSSLDT-IVKKVIEDVGSQVTGVKVSV-GAVKISLSEG 58

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                  + +            ++  +++  +   L    + V D+ +  P + + ++S 
Sbjct: 59  KG-SISGLTVANPPGFSSDPAIRLGEIALALDTGSLNKNPVVVKDITVASPFVAYEMASG 117

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           G +                      +  +    D++ ++   +  L +      L     
Sbjct: 118 GSN--IDVIQKNVKAFTAKQAGAKAEPAKPASKDKDEEKKLVIERLAITGGQVKLAAGGI 175

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
              +          T    +   A          +  ++  ++
Sbjct: 176 PGAEGTAKLADIVLTNIGKDSGGASSAQVAQKVMDSLVNGALK 218


>gi|31789469|gb|AAP58582.1| hypothetical protein [uncultured Acidobacteria bacterium]
          Length = 500

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/317 (11%), Positives = 87/317 (27%), Gaps = 23/317 (7%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE 84
                   R+  E+QA+  +G+ + +    ++ ILP P +   D+++           + 
Sbjct: 26  WLFAGDGVRQALEQQASTWLGQPVQIA-SARVAILPRPGLRLSDVKVGGAAS----LSLS 80

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV 144
            + +  +   LL   I    + I    L   +             T              
Sbjct: 81  AIDIATDLGALLRRRIENARIEISSSRLELPI----------ALPTSGGGGAPTASGDAT 130

Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF 204
                 +I+  S     L D+ L    R + + +   +D  +  V    T          
Sbjct: 131 SDASASVIEVASISEIALRDVTLASHGREITVSASAGLDGNRLIVR-RFTATSGLTTLDA 189

Query: 205 KITAN-FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL 263
               +  P  +  + +      +   + +    +     +    +    VA   S     
Sbjct: 190 LGEVDLAPRVDARLKVAANRLDVDELLALAAAFSPAAAARPAASTPPPRVAARVSAESAT 249

Query: 264 ELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
               +  + + +F+++   V +S    Q                +      L+ S     
Sbjct: 250 AGGVEIRQFATDFELNGDAVALSPLTFQLFGG----RYQGSMNATMG--RTLSASIRSRI 303

Query: 324 SMHDLNETDFFEEEEKK 340
              D+ +   F   E  
Sbjct: 304 MDLDVAQLAAFGGAEGT 320


>gi|85713046|ref|ZP_01044083.1| Uncharacterized conserved membrane protein [Idiomarina baltica
           OS145]
 gi|85693149|gb|EAQ31110.1| Uncharacterized conserved membrane protein [Idiomarina baltica
           OS145]
          Length = 1290

 Score = 53.4 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 94/271 (34%), Gaps = 15/271 (5%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFE 80
            +P F D T      ERQ +  +G+++ +   + +      P++   + ++   +  +  
Sbjct: 35  GLPYFPDLTK---PLERQVSASLGQQVHINQ-LALSWRQQGPAIELSNFKLGDTDHDALS 90

Query: 81  SKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHL--NFYLSSKGVSNWFQRKSTMDMIHNV 137
             +  L +  +F   +   +  +    ++Q  +  +    ++G S    +   ++ +   
Sbjct: 91  VDVGRLWVVIDFWESVAERQWVLQQFILEQADIQLDLRRLTQGESE-SVKLDQVEQLFLN 149

Query: 138 ILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196
            LE    +   + +     + +   +  L+          +    + +            
Sbjct: 150 QLESFSFQQSSLHVTPLSGNSRTIDIERLSWSNRGSIHQGVGQFRVKNF-TPNRLNFVLQ 208

Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGD 256
            + +R    +   F   ++ I +   L      I I    N+ +     I+ G   V+  
Sbjct: 209 LEGRRWR-DMVGQFYVDSRGIDVSPWLEKQIPGIDIT-DSNVNFTVWLDIFQGQ--VSKA 264

Query: 257 FSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
             ++L+  L+ ++     +  I  G V++ R
Sbjct: 265 LMRILDNRLTMQRDNRVVDLHIPSGEVQMER 295


>gi|87120468|ref|ZP_01076362.1| hypothetical protein MED121_21962 [Marinomonas sp. MED121]
 gi|86164111|gb|EAQ65382.1| hypothetical protein MED121_21962 [Marinomonas sp. MED121]
          Length = 1263

 Score = 53.4 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 84/274 (30%), Gaps = 10/274 (3%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHI- 58
           +  ++  L   F ++L         +      +R+  E   + + G  + +   I   + 
Sbjct: 1   MTDIIWWLAVSFVLILASLIVSVKLLLPHVDKYRQQIEINLSHLSGYNVKID-NISAKLE 59

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG-EIRVFDMYIDQPHLNFYLS 117
              PS+  + + ++  E+       E L +R  F   +   E +   +      +     
Sbjct: 60  GLDPSIAIRGLSLEAAENSEP-VAFERLMIRFNFWESVRQFEPKFSYIRFYNTKIGLSEV 118

Query: 118 SKGVSNWFQRKSTMDMIHNV-ILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLN 175
               S                 +    +   +I ++D   D     +  ++L   + +L 
Sbjct: 119 GGNWSLTGIESGGGGSADGFTRILNYFLDQRQISLLDTRLDIDSERVGKVSLSSDSMYLK 178

Query: 176 IISP-LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
             S  + I +  G    +    F+ +        N       +SL  ++  +   +    
Sbjct: 179 RTSSGIGITANVGHQNYDDEFRFNAEIKGDLKKLNNLNLEAQLSLP-EMVIMPSQLKALK 237

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268
              L            +S   DFS + ++++S  
Sbjct: 238 EYKLSKLALGTNLWLSYSPEKDFSLVGDIKVSPM 271


>gi|146306820|ref|YP_001187285.1| hypothetical protein Pmen_1789 [Pseudomonas mendocina ymp]
 gi|145575021|gb|ABP84553.1| hypothetical protein Pmen_1789 [Pseudomonas mendocina ymp]
          Length = 364

 Score = 53.4 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/335 (11%), Positives = 93/335 (27%), Gaps = 22/335 (6%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMR 89
            R+    +   +   +  +   I +      +     + I +              + + 
Sbjct: 34  IRDYLNDKLADMGDYQGQIS-DIDLAWWRG-AYRINGLSIVKVTGDVPVPLLDAPLIDIS 91

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH--------NVILEK 141
             + PL      V ++Y ++P LNF     G  N    ++               + L +
Sbjct: 92  VSWPPLWRERAVVAEVYFERPQLNFV---DGGENEQADQTGAGTDWRDQLNKLLPITLNE 148

Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG-NFDNK 200
           + V  GRI   +  +     LS   +  S   L  +     D +      EG     ++ 
Sbjct: 149 LRVIDGRITFHNFTTSPKVELSADEVNASLYNLTNVGDEPGDRVAH---FEGRALLLEHA 205

Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDF 257
               + T +   + +   L+++   +      D     G   +           S     
Sbjct: 206 PLEAEATFDPFEQFEDFELRLRARDIDLTRFNDFARAYGRFDFKRGSGDLVIEASADDAQ 265

Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317
                  L  +         + D +  + R   ++++    T   N+ +        L+ 
Sbjct: 266 LSGYIKPLLREVEVFDWEQDVEDEDKGVLRSLWEALVGGGETLLKNQRRDQFATRVELSG 325

Query: 318 SENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
           + +  E        +       +  +   ++   Q
Sbjct: 326 NVHDQEVSAFQAFLEILRNGFVEAFDPRFERPPPQ 360


>gi|297621442|ref|YP_003709579.1| hypothetical protein wcw_1216 [Waddlia chondrophila WSU 86-1044]
 gi|297376743|gb|ADI38573.1| hypothetical protein wcw_1216 [Waddlia chondrophila WSU 86-1044]
          Length = 767

 Score = 53.4 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 40/399 (10%), Positives = 109/399 (27%), Gaps = 39/399 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFRED----FERQATLIVGKKIAVKGGIKIH 57
           ++ +   +  LF     G       +     R               G  + +    +I 
Sbjct: 1   MKWIKQAIFILF----AGFLLFGALLQLDSVRSRMKTFLIESIESGTGYTVQIG---QIR 53

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-NFYL 116
           + P   +  KDI     +     +    L +    L LL G++R   ++I+   + N   
Sbjct: 54  LFPSFQMTAKDIVFM--DGEVPLAAFNHLHLGIYPLDLLKGKLRFSTLHIEGVDVLNLPK 111

Query: 117 S------SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQ---ESDQVYFLSDLNL 167
                       +    +       +  ++ I+     I +      +       S+ N+
Sbjct: 112 ETLKSEGKNSTISMIAIEDFFIEKIHWSIKGINPPDYPISLKGSLIVDQQHDLIYSNFNV 171

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
             S +   +   L  +   G+++ +     D  R++     +     +            
Sbjct: 172 F-SPQSSGVSGDLRYEKKNGTLLLQQE---DGFRASLAFVMDESRGVRVPRFLATWHETT 227

Query: 228 YPIIIDLFGNLFWNEKQPIYSGV-----FSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
                 +       +     S         ++G       +  S    ++  +  +S   
Sbjct: 228 IDGKFSVTQTGGIEDSAFFLSIDDLSQMVPISGALLGEAVISGSINSPKI--DLSLSSNQ 285

Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQ-DEENLLNFSENGAESMHDLNETDFFEEEEKKN 341
           +      ++ +  + ST       ++    E    F    +    D     F  + + + 
Sbjct: 286 LSGFGQTVEKLKLHLSTSGKGSFSLAFVKNEQDYMF---SSALTWDQKTPWFPTQLDLRL 342

Query: 342 KNDDLKKDDIQYSVNKKEEKDNSHDKENQ-ENFSGDKMI 379
             + + +       +   +   +   +NQ   F  + + 
Sbjct: 343 PLEKVAQLANWDVADIDGQLLINVRYQNQTLTFKAELLE 381


>gi|312958983|ref|ZP_07773502.1| hypothetical protein PFWH6_0880 [Pseudomonas fluorescens WH6]
 gi|311286753|gb|EFQ65315.1| hypothetical protein PFWH6_0880 [Pseudomonas fluorescens WH6]
          Length = 1271

 Score = 53.0 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 82/267 (30%), Gaps = 17/267 (6%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
           +R   E +A   VG    + G ++     F P +  +D+ + +   GS   +++ + +  
Sbjct: 43  YRAQVEARAEGAVGMPTHI-GSLEGRWSGFAPVLLARDVMVGE---GSNALRLDQVEVVP 98

Query: 91  EFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149
           +    L   E+R+  + +    L+      G           D   +    +  +   ++
Sbjct: 99  DIWASLMAREVRLAHLQLSGLQLSAKEDKDGHWALQGLPMQDDQPLDP---EQLLTRMQM 155

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF-DNKRSAFKITA 208
                  D    L  L+    A        LS+ +       +      D +  A  + +
Sbjct: 156 VKRVSLLDSQVTLQPLD---QAPLTLTYVGLSLHTGVTRQRLDARLTLPDGQPLAVSLRS 212

Query: 209 ---NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL 265
                  K+  +   + L    +   I       W   Q    G F +      + +  +
Sbjct: 213 RIRASQWKDAQVQAYLSLPQSDWAKWIPAKLTQQWKLTQFKAGGEFWLNWGKGTVQSAVV 272

Query: 266 SAKKSRLSGNFKISDGNVRISRYKLQS 292
                ++ G++      V I    L +
Sbjct: 273 RLNSPQVKGSY-AERKPVHIENLALTA 298


>gi|311695341|gb|ADP98214.1| conserved hypothetical protein [marine bacterium HP15]
          Length = 1251

 Score = 53.0 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 13/175 (7%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLS 87
           +   FR+D  R+ +  +G  +++ G         P+    DI++   + G   + ++ L+
Sbjct: 54  NVDSFRDDLARELSDRLGHDVSIGGLSSQWYWLDPAFTASDIQVTHPDTGIVVANLQHLN 113

Query: 88  MRA-EFLPLLSGEIRVFDMYIDQPHLNFYLSSKG----VSNWFQRKSTMDMIHNVILEK- 141
           +R      L+   I   D   D   L       G             +  +   + L   
Sbjct: 114 IRFAALASLMRLRIVFEDFQADGLELTVNQERGGDVAVRGAEIPEPVSNQLQEWLELAGD 173

Query: 142 ------IHVKGGRIKIIDQESD-QVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189
                 + +    + I D + + +   +  L+L       +             +
Sbjct: 174 WLSDPYVKITRVNLGIRDNQGNLRHLDIPQLDLDYRRGLFHASGRAMQSGTTQQL 228


>gi|269469166|gb|EEZ80708.1| hypothetical protein Sup05_0618 [uncultured SUP05 cluster
           bacterium]
          Length = 830

 Score = 53.0 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/299 (10%), Positives = 87/299 (29%), Gaps = 11/299 (3%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-P 62
           +V   +  + ++++V +    +    +  +   E Q + +    + +K  I         
Sbjct: 14  KVSTWISAIVALLVVLSVAFFVAF-PSLIKAPIEHQISHLSNLNVELK-KITFDFERRGL 71

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           ++    + +   E     + +  L  R   + L     +  ++Y+D   L   +  +   
Sbjct: 72  ALKIHGLEVSSLEKKQPIASVNILKWRLNLMSLFEDIFQPSNIYLDTLTLYSSVDPQDRE 131

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
                   +    N+       K   I     +  ++  ++ + L          + L +
Sbjct: 132 FSVDDIKQLISSENLATLHF-FKSLTINKTLIKGREIIQIAPIKL------SRDEAQLLL 184

Query: 183 DSIKGSVIAEGTG-NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                 +   G   N         ++A    ++K ++L + +    + ++  L       
Sbjct: 185 KIKDQDIDLGGMASNLGKVDITATLSATQSEQDKFLTLPLLISSDDFSLMSHLKIFNEGG 244

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300
           E    +          S    L      S        +  + ++S  KL      S   
Sbjct: 245 EDFVEFVSYLDQVEIDSIGEYLPPKLLSSATYAWLNRAFVSGKLSNVKLNVKKNLSKQT 303


>gi|289676034|ref|ZP_06496924.1| hypothetical protein PsyrpsF_22360 [Pseudomonas syringae pv.
           syringae FF5]
          Length = 532

 Score = 53.0 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/278 (11%), Positives = 83/278 (29%), Gaps = 28/278 (10%)

Query: 55  KIHILPF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113
           ++   PF   +    + I     G  +   E L    +   L +  + +  + + +P   
Sbjct: 19  RLEFNPFTLELTLWGLNIGTP--GKEQVAFEKLYANLQINSLWTRALHLQRVELIKPRTE 76

Query: 114 FYLSSKGVSNWFQRKSTMDM----------IHNVILEKIHVKGGRIKIIDQESDQVYFL- 162
                +G  N  Q                    + +++I + GG +   D    Q     
Sbjct: 77  LLFDKQGKLNLAQLFKLPASEPAKDEPATKPFPLRIDEIKLAGGYVHFQDLRPSQPIEFL 136

Query: 163 ---SDLNLQISARFLNIISPLSIDS---IKGSVIAEGTGNFDNKRSAFKITANF------ 210
               D  L+  +      + +++ +     G +   G  +     S   +          
Sbjct: 137 YDALDFELKNLSTLPEDNADMTLVAAGPDGGQIDWVGRISLIPIASEGTLKVTDSKMKLW 196

Query: 211 -PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKK 269
            P    A+ L ++   L +     L  +     K    S   +     +      +  ++
Sbjct: 197 WPYVRDALPLALEDGVLNFSTAYTLNLSKETELKLTNVSASVAPFALNAPDGRPLVRLQR 256

Query: 270 SRLS-GNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             +S  +  ++   V + + + Q +   ++ + D +  
Sbjct: 257 LDVSETSVDLAKQLVTVGKVRSQKLETWAAREADGQLD 294


>gi|296125685|ref|YP_003632937.1| hypothetical protein Bmur_0638 [Brachyspira murdochii DSM 12563]
 gi|296017501|gb|ADG70738.1| conserved hypothetical protein [Brachyspira murdochii DSM 12563]
          Length = 1086

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/381 (10%), Positives = 99/381 (25%), Gaps = 32/381 (8%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI--DQKEDGSFESKI 83
           + +    +   E        +K+ + G     +L FP +   D+ +      +     KI
Sbjct: 53  YFNNERVKNLIEDIVYSSTDRKLEI-GDFNYALL-FPKIELSDVVLYNSSNFNNEENIKI 110

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIH 143
           + L +R     L   ++ + +  ID  ++  +    G  N      +   I +   E   
Sbjct: 111 DNLRLRFSLFSLFLLKLHIKEFSIDNLYVYMFTDESGNWNLPDLPPSEPKIEDTNKEPFD 170

Query: 144 VKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS-IDSIKGSVIAEGTGNFDNKRS 202
           +      +  + + +   +++L  +  ++      P + + +   +       +      
Sbjct: 171 MSKLDF-LKLKANIENIRINNLAFKADSKSFLTNEPNNGLIASLSNYNLHLDLHSKRFSL 229

Query: 203 AFKITANFPAKNKAISLK--------------IQLFPLAYPIIID---LFGNLFWNEKQP 245
           +  +  N P   K I LK              +      + + I           +E   
Sbjct: 230 SQVMGVNAPEVLKDIYLKSFISSSLAYNDSSILFNDNPLFNLDISYPKKEEGFSEDEIII 289

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
            +                +     + L   + +   +V +     + +  +         
Sbjct: 290 RFDFEIDEPNFTYNGKKRDDIQASAHLFARYNVKTQSVYLENLSSELLN-DEILKVIASA 348

Query: 306 KVSQDEENLLNFSENGAESMHDLNETDFF--------EEEEKKNKNDDLKKDDIQYSVNK 357
                    +N     A    D   T                 N + D     I    N 
Sbjct: 349 NQIFSSNIGVNLDTLYARINLDKVNTLVPMIVPDLGINVGGMVNVDADKTIGTINDLTNT 408

Query: 358 KEEKDNSHDKENQENFSGDKM 378
                +       +  S D +
Sbjct: 409 INISLDKIKLSMGDTISVDNL 429


>gi|71276039|ref|ZP_00652320.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
 gi|71163122|gb|EAO12843.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
          Length = 1286

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/286 (10%), Positives = 79/286 (27%), Gaps = 21/286 (7%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92
           +      ++  G+ +     +        P +  + +RI        +  +  + +    
Sbjct: 56  QQVADWLSVRAGQPVRFD-TLSTSWTQRGPLLRLQGVRI----GPQGKVGVGQVEVLVAM 110

Query: 93  LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKI---HVKGGRI 149
              L     + ++ +    L  +  S G  + +     +      +L +     V GGR+
Sbjct: 111 YTGLLPGHSLIELRLRGMALTVHRDSAGRWSVYGLPRDVGGDPLEVLRRFGELQVIGGRL 170

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209
            +    S     LS +NL++      + + +            G  +FD       +   
Sbjct: 171 SVDAPSSGVSTTLSQINLRVRVAGDRLRAGVHGWLDSARAPVTGVVDFDRVSGDGDVYVE 230

Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI-----YSGVFSVAGDFSKLLNLE 264
                 A    +    +    + D  G++    +         +    + G   + + L 
Sbjct: 231 TLPNQLASWSSLLAGVMRGVHLRDGAGHVRAWAQLHRHHVEQVTVQGDLQGVRFEGVRLA 290

Query: 265 LSAKKSR-------LSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
                 R       +   ++      R+   +L+          D 
Sbjct: 291 GQTVVPRVFWPQLQVLVRWQRQGDGWRVVAPRLRMGESGRLQKLDG 336


>gi|188994012|ref|YP_001928264.1| hypothetical protein PGN_0148 [Porphyromonas gingivalis ATCC 33277]
 gi|188593692|dbj|BAG32667.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 1582

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/290 (12%), Positives = 77/290 (26%), Gaps = 26/290 (8%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI 83
           P    W        ++A+   G +I +    +I +     +  +DI    K  G   + I
Sbjct: 19  PPIQQW--AVGIATQKASEATGMQIGIG---RIRLGFPLHLSLQDIT-AVKVQGDTLADI 72

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLN-------FYLSSKGVSNWFQRKSTMDMIHN 136
             L +    LPLL  ++ V ++ +    ++         L  K  S      +       
Sbjct: 73  GSLRVSVSVLPLLRRQMEVPELKLQDASIHYTDSLGLMDLRLKAKSIRAAHIAIDPEAKR 132

Query: 137 VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI------ 190
           V+L +  +    I     ++                   +        ++  +       
Sbjct: 133 VVLGRWQLSDTDIAYFSADTTATDTTQKEPFDWQFELDRLDLKNISAEVRMPLDSVLLKT 192

Query: 191 AEGTGNFDNKRSAFK---ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
             G       +               ++ +         A P   D       +      
Sbjct: 193 FVGKAAIAKAKMDIADMLYQVGMAQLDRTVLSYDTDEGEASPTSFDYRHIALNDVSLQAK 252

Query: 248 SGVFSVAGDFSKLLN----LELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
              F       +L+N         +  RLSG +++      ++   L + 
Sbjct: 253 DICFHDGDMELQLVNGSLRERDRFELQRLSGRYRMDRFGFLLTDLSLATG 302


>gi|258627020|ref|ZP_05721818.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258580694|gb|EEW05645.1| conserved hypothetical protein [Vibrio mimicus VM603]
          Length = 1292

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           L R+L+ L     +VL  A T    +      F+ + +         ++A+         
Sbjct: 8   LGRILMWLLVSLLIVLALAVTGLRILLPQMNRFQAEIQHWLNQNSSVQVAIADVKGYWRN 67

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113
             PS+  + ++    +    +     + +  + L  L   +  + D+ I+   L+     
Sbjct: 68  THPSLSLQALQAHWPDSNDIQLNAASIEIEFDLLQSLWERQPVIADLTINGMVLDLRAID 127

Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168
                 +     +   R    +D +    L+   +K   I       D +   +  L  Q
Sbjct: 128 WLALEQNPNPRQSRQGRVVQQLDDLLLRQLDDFTLKNSAILYRTFVGDMRQLDIEKLRWQ 187

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
            S +       +SI          S      G+  +    F ++A+       ++  ++ 
Sbjct: 188 NSGQRHFTEGVVSIAGTNINSLLVSANFMDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281
                   +           QP   G   +        N E + +    SG    K +  
Sbjct: 248 QTGIQKGQLSFNAWATLEHNQP-IDGYVELKPSELVWQNGEQNHELLLESGIVELKPTKQ 306

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
             +++ + L+ +  +          +     N    + +     
Sbjct: 307 GWQVNAHSLR-LRSDDVLWPLLDVAMDWQP-NEWRLNLSQLNID 348


>gi|311696755|gb|ADP99628.1| secreted protein containing DUF748 [marine bacterium HP15]
          Length = 941

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 76/235 (32%), Gaps = 28/235 (11%)

Query: 64  VFFKDIRID-QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +  ++  +   ++          +S+ A    L   EIR+  + +D+  +    S+ G  
Sbjct: 285 LQLENFAVALDEQSEQARLTNAEVSVDAVGFDLNGREIRIGQVSLDKLDVAVARSANGEI 344

Query: 123 NWFQR-------------KSTMDMIHNVILEKIHVKGGRIKIID--QESDQVYFLSDLNL 167
           +W                 ST        +  + + GGRI   D    +     +  L+ 
Sbjct: 345 DWLAPLATNNGETEGGGEASTGGQPFRWSVAGVALSGGRILWQDSQPATATEIAVEQLSA 404

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL-------- 219
            I      +  P+S + I GS+ + G  + + + +    T         I+L        
Sbjct: 405 SIGQLSHQLEEPVSYE-ITGSLASGGQLSLNGQVTPAPFTLEAAISGNGIALAAFEPYVQ 463

Query: 220 ---KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR 271
               + +      +  +L  +         +SG   VAG   KL +   S    +
Sbjct: 464 EGANLAITSGTLGVDGNLDLDGQQEPLTGTFSGTAEVAGLDLKLPDSSGSLVSWQ 518


>gi|170729678|ref|YP_001775111.1| hypothetical protein Xfasm12_0471 [Xylella fastidiosa M12]
 gi|167964471|gb|ACA11481.1| conserved hypothetical protein [Xylella fastidiosa M12]
          Length = 1286

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/286 (10%), Positives = 79/286 (27%), Gaps = 21/286 (7%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92
           +      ++  G+ +     +        P +  + +RI        +  I  + +    
Sbjct: 56  QQVADWLSVRAGQPVRFD-TLSTSWTQRGPLLRLQGVRI----GPQGKVGIGQVEVLVAM 110

Query: 93  LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKI---HVKGGRI 149
              L     + ++ +    L  +  S G  + +     +      +L +     V GGR+
Sbjct: 111 YTGLLPGHSLIELRLRGMALTVHRDSAGRWSVYGLPRDVGGDPLEVLRRFGELQVIGGRL 170

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209
            +    S     LS +NL++      + + +            G  +FD       +   
Sbjct: 171 SVDAPSSGVSTTLSQINLRVRVAGDRLRAGVHGWLDSARAPVTGVVDFDRVSGDGDVYVE 230

Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI-----YSGVFSVAGDFSKLLNLE 264
                 A    +    +    + D  G++    +         +    + G   + + L 
Sbjct: 231 TLPNQLASWSSLLAGVMRGVHLRDGAGHVRAWAQLHRHHVEQVTVQGDLQGVRFEGVRLA 290

Query: 265 LSAKKSR-------LSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
                 R       +   ++      R+   +L+          D 
Sbjct: 291 GQTVVPRVFWPQLQVLVRWQRQGDGWRVVAPRLRMGESGRLQKLDG 336


>gi|307579440|gb|ADN63409.1| hypothetical protein XFLM_07485 [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 1271

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/286 (10%), Positives = 79/286 (27%), Gaps = 21/286 (7%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92
           +      ++  G+ +     +        P +  + +RI        +  I  + M    
Sbjct: 41  QQVADWLSVRAGQPVRFD-TLSTSWTQRGPLLRLQGVRI----GPQGKVGIGQVEMLVAM 95

Query: 93  LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN---VILEKIHVKGGRI 149
              +     + ++ +    L  +  S G  + +     ++         L ++ V GGR+
Sbjct: 96  YTGILPGHSLIELRLRGVALTVHRDSAGRWSVYGLPRDVEGDPLEVLRRLGELQVIGGRL 155

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209
            +    S     LS +NL++      + + +            G  +FD       +   
Sbjct: 156 SVDAPSSGVSTTLSQINLRVRVAGDRLRAGVHGWLDSARAPVTGVVDFDRVSGDGDVYVE 215

Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI-----YSGVFSVAGDFSKLLNLE 264
                 A    +    +    + D  G++    +         +    + G   +   L 
Sbjct: 216 TLPNQLASWSSLLAGVMRGVHLRDGAGHVRVWAQLHRHHVEQVTVQGDLQGVRFEGGRLA 275

Query: 265 LSAKKSR-------LSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
                 R       +   ++      R+   +L+          D 
Sbjct: 276 GQTVVPRVFWPQLQVLVRWQRQGDGWRVVAPRLRMGESRRLQKLDG 321


>gi|326317328|ref|YP_004235000.1| AsmA family protein [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323374164|gb|ADX46433.1| AsmA family protein [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 766

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/434 (8%), Positives = 90/434 (20%), Gaps = 92/434 (21%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFP--------------SVFFKDIR 70
             DW   R     + +   G+  A++G +      P P              +V  + + 
Sbjct: 46  TFDWNRARPWINERVSAATGRHFAIEGDLTARWHWPQPADMETGWRRWVPGLTVQAERMV 105

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV--------- 121
           +  + D      +   +  A+   +                     S+            
Sbjct: 106 LGNRADFGRYGAVGMDAGNADARVVERRASAASATAPASGVPASPASAPASAASAPEAAG 165

Query: 122 -----------SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL--Q 168
                       +          +  + L   HV  G + I   +          N    
Sbjct: 166 AAGASGSGPVPPSMATVGRATASLKLLPLLVRHVSIGTLSIQTPDVALARRADGSNNWTF 225

Query: 169 ISARFLNIISPLSIDSIKGSVIA-EGTGNFDNKRSAFKITANFPAKNKAISLKIQLF--- 224
                    SP         ++  +G     + R      A+   +++     ++     
Sbjct: 226 DRPAPDGSASPNPWTVNVARLVVNDGRLALSDARKDLAFVAHLATQSQPGPYGVRFDVRG 285

Query: 225 -------------------------------PLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253
                                            A  +  ++ G L              +
Sbjct: 286 RYAKARIEGSGQAGNVLSLRQQDVQYPLQFKARAGTVRAEVEGTLANPLALAGMDLQVLL 345

Query: 254 AGDFSKLLNLELSAKKSR---------LSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
             +    L                   L G+ +          +       +       +
Sbjct: 346 QAESMADLYPLTGLVLPNTPPFRTKGHLVGSLEPGRAVWDYRDFTGMVGQSD----LRGQ 401

Query: 305 TKVSQDE-ENLLNFSENGAESMH-DLN-----ETDFFEEEEKKNKNDDLKKDDIQYSVNK 357
              +  +    L       +    DL       +    +E+  +K       D  ++ ++
Sbjct: 402 LTYTSGQPRPRLKGEMASRQLRLADLGPVVGAPSGERPQEKGTSKRAGKVLPDASFATDR 461

Query: 358 KEEKDNSHDKENQE 371
               D     + + 
Sbjct: 462 WNAMDLDLTFKGER 475


>gi|325298012|ref|YP_004257929.1| hypothetical protein Bacsa_0863 [Bacteroides salanitronis DSM
           18170]
 gi|324317565|gb|ADY35456.1| hypothetical protein Bacsa_0863 [Bacteroides salanitronis DSM
           18170]
          Length = 1001

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/263 (11%), Positives = 77/263 (29%), Gaps = 31/263 (11%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL---PFPSVFFKDIRIDQK- 74
            A  +              + A   +  K+ +K  +++      P   +   +  +  K 
Sbjct: 27  IALAINFIFTPEKLTPVVLKVANQTMNAKLDMK-SVELTFFSTFPRFGLKLTEGSLVSKA 85

Query: 75  ------EDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127
                 E            +    L      +I V  + ++   +  Y + +GV+NW   
Sbjct: 86  VSDSVWEKTDSLLAFGKCVVVVNPLDYFYKSKITVNYLGVEDASIYAYKNKEGVANWDIL 145

Query: 128 KSTMDM----------------IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
           K+                       + + K+ +K   +   D+++     L + +L + A
Sbjct: 146 KTDTASVQAPADTVVSDTVRPLTGGIDIRKVSLKRANVTFDDRDTRVYASLRNASLALRA 205

Query: 172 RFLNIISPLSIDSIKGSVIA--EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
                 S LS+     ++I   +G    +   +            + ++L          
Sbjct: 206 SLYKERSRLSVGFKNDNIIFWQDGQLLVNRIATELNADVELERATRLLTLN-DAGISVNG 264

Query: 230 IIIDLFGNLFWNEKQPIYSGVFS 252
           +  D+ G L  +  +   +    
Sbjct: 265 VRFDVKGTLRGDSARHALAVNLE 287


>gi|146282817|ref|YP_001172970.1| hypothetical protein PST_2475 [Pseudomonas stutzeri A1501]
 gi|145571022|gb|ABP80128.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
          Length = 356

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 85/291 (29%), Gaps = 16/291 (5%)

Query: 53  GIKIHILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110
            + +      +   + + I++K+    +   K   + +   +  +L     V ++   QP
Sbjct: 49  DVDLVWWRG-AYRVEGLLIEKKDKRVQAPLFKAPSIDIAISWDAILRHREIVGEVVFKQP 107

Query: 111 HLNFYLSSKGVSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
           HLNF        +              +  + L +I V  G++   +  SD    +   +
Sbjct: 108 HLNFVDGGDSGDSQSGEGVDWRDQLDALVPITLNEIRVVDGQLSFRNFSSDPQVHVYASD 167

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
           +Q S   L   +  +  +   +    G   F+          +     +   + +++  +
Sbjct: 168 IQASLYNL-TNTDDADGTRTATFEGTGKL-FNQAPIEATARFDPFTDWEDFEVNLRVTGV 225

Query: 227 AYPIIIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
               + DL      ++        V  V  + S+L        K  L             
Sbjct: 226 PLKQLNDLSRAYANFDFAGGTGDLVVEVEANDSQL----DGYIKPLLRNVDIFDYEQDVA 281

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLL--NFSENGAESMHDLNETDFF 334
           +  K        +     +  +    ++        +G     D++    F
Sbjct: 282 NEDKGFFRGLWEAVVGGGQEVLKNQRKDQFATRVELSGTTKETDVSPFQAF 332


>gi|77747641|ref|NP_778647.2| hypothetical protein PD0417 [Xylella fastidiosa Temecula1]
 gi|182680973|ref|YP_001829133.1| hypothetical protein XfasM23_0411 [Xylella fastidiosa M23]
 gi|182631083|gb|ACB91859.1| conserved hypothetical protein [Xylella fastidiosa M23]
          Length = 1274

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/286 (10%), Positives = 79/286 (27%), Gaps = 21/286 (7%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92
           +      ++  G+ +     +        P +  + +RI        +  I  + M    
Sbjct: 44  QQVADWLSVRAGQPVRFD-TLSTSWTQRGPLLRLQGVRI----GPQGKVGIGQVEMLVAM 98

Query: 93  LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN---VILEKIHVKGGRI 149
              +     + ++ +    L  +  S G  + +     ++         L ++ V GGR+
Sbjct: 99  YTGILPGHSLIELRLRGVALTVHRDSAGRWSVYGLPRDVEGDPLEVLRRLGELQVIGGRL 158

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209
            +    S     LS +NL++      + + +            G  +FD       +   
Sbjct: 159 SVDAPSSGVSTTLSQINLRVRVAGDRLRAGVHGWLDSARAPVTGVVDFDRVSGDGDVYVE 218

Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI-----YSGVFSVAGDFSKLLNLE 264
                 A    +    +    + D  G++    +         +    + G   +   L 
Sbjct: 219 TLPNQLASWSSLLAGVMRGVHLRDGAGHVRVWAQLHRHHVEQVTVQGDLQGVRFEGGRLA 278

Query: 265 LSAKKSR-------LSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
                 R       +   ++      R+   +L+          D 
Sbjct: 279 GQTVVPRVFWPQLQVLVRWQRQGDGWRVVAPRLRMGESRRLQKLDG 324


>gi|183219754|ref|YP_001837750.1| hypothetical protein LEPBI_I0330 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189909890|ref|YP_001961445.1| hypothetical protein LBF_0321 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167774566|gb|ABZ92867.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167778176|gb|ABZ96474.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 702

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/421 (9%), Positives = 117/421 (27%), Gaps = 46/421 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + + L+   F+ S+ +      PL  D   ++         +    +  K    +   PF
Sbjct: 13  IGKTLLTFIFVISMTMF-FILYPLLADPDYYKNLILESTYKLTELNVNYKSSEPV-FFPF 70

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK-- 119
           P +   ++ + + +D      +  L +   +   +   + +  +Y++   +         
Sbjct: 71  PGIELNEVTVSKADD--EIIHVNKLRIEIYYGVFIGKSLELRKIYLNTGTVEITREKDES 128

Query: 120 --------GVSNWFQRKSTMDMIHNVI-------------------LEKIHVKGGRIKII 152
                      N   +K T + I ++                    + +I +K   I   
Sbjct: 129 FPLFERLSSQPNPDPKKKTKNEIESLDSNTEETPTELYFSKTFVNFVNQIEIKNITILFE 188

Query: 153 DQESDQVYFLS--DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF-KITAN 209
           D+   +   L   +  L +     N+   L        +       F   +  +  +   
Sbjct: 189 DKLYSRNINLYLWETTLHLDQDLRNLDFYLYGKLNHEPITLSSNFFFVEDKMTYESLRLE 248

Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLF-----GNLFW--NEKQPIYSGVFSVAGDFSKLLN 262
              + + +        L      DL      G + +   ++  IY+ +  +      L +
Sbjct: 249 GELQFQNLKGIDLHDILIIFTRGDLRFVKTTGTIPFYKRDESKIYAVIDQLHIKDLALKD 308

Query: 263 LELSA-KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321
            +  A        ++ I++     +   ++    +          +       ++F    
Sbjct: 309 GKTFADGHVSTLMHYDINESKFNFANIVIEWKGKSKLYASGYVNFLKPPLSPTVSFEATS 368

Query: 322 AESMHD--LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
                   L     + + + +         +  Y        + +    N  +F  D + 
Sbjct: 369 DYLDVPSILKVAKIWIDPDFEKSILTRGLPNTGYVNRMNVYLNFNFRNLNIADFKADSLK 428

Query: 380 L 380
           L
Sbjct: 429 L 429


>gi|197122231|ref|YP_002134182.1| AsmA [Anaeromyxobacter sp. K]
 gi|196172080|gb|ACG73053.1| AsmA [Anaeromyxobacter sp. K]
          Length = 879

 Score = 52.2 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 78/270 (28%), Gaps = 33/270 (12%)

Query: 38  RQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS-FESKIEGLSMRAEFLPLL 96
            + +  +G+ +AV+  +K  +L    V    + +   E      + +E   +    +  L
Sbjct: 44  DRLSQQLGRPVAVE-RVKTRLLGGVGVRVAGVSVGAGEGEDRPLATLERAEVEVNLVGAL 102

Query: 97  S---GEIRVFDMYIDQPHLNFYLSSKGVSNWF-------------------QRKSTMDMI 134
                 + V +  +D   +N      G +N                       +     +
Sbjct: 103 LSGGKRVTVREAVVDGLRVNVIRFPDGTTNLERVAKRLQETSAKEPAAEAPAGEQKPADL 162

Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
             V +++  V+  RI  +D+       L   +L +  R L    PL +      +     
Sbjct: 163 SAVRVDRAAVENARIAFLDRSVKGAEELYVDDLDVEVRDLRAGRPLEVVLKAAVLAKAQN 222

Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254
                K +    T     +   + ++        P    + G   +   +       ++ 
Sbjct: 223 LELRVKAAPLPPTLVPTPEQLTLKVQPIDLGPLAPF---VPGEAGFRGGRFQADLAVALG 279

Query: 255 GDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                   +   + ++ + G F+       
Sbjct: 280 AA------VPGGSGRTTVKGGFRADQLAFA 303


>gi|119713302|gb|ABL97367.1| hypothetical protein ALOHA_HF1045G01.0036 [uncultured marine
           bacterium HF10_45G01]
          Length = 496

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/346 (13%), Positives = 112/346 (32%), Gaps = 23/346 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           ++++    LF  + V    +P F + TD  E+ +++    +         IK +  P P 
Sbjct: 42  KIILTFVALFV-IFVSYLLLPTFYNKTDISEELKKELQDKLDLNFRFSENIKYNFFPKPH 100

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGVS 122
               D +I  K      SKI    +   F  L S  +I + D+ ++  + N   ++K  +
Sbjct: 101 FIITDSKIYYK--QEEISKISKSKIFISFDNLFSISDIEIRDVILENSNFNL--NAKNYN 156

Query: 123 NWFQRKSTMDMIHNVILEK----IHVKGGRIKIIDQESDQVYFLSDLN----LQISARFL 174
            + +  +      ++I+E            + +I +     Y+                 
Sbjct: 157 FFLELLNRSFKNGDLIIEDSNVIFRHSDSEVLLISKIFKMKYYYESNEEKNIFFSENEIF 216

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK-------AISLKIQLFPLA 227
           NI   +     +G      + N +  +   +    F  + K       +  L+       
Sbjct: 217 NIPFTIESFFSEGKNEFFSSINLNLMKLKIQNQLTFKNEKKIGKSEFVSNKLRRIAEYQI 276

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
                + +     ++   IY G F+    ++ L   +     + L G   I    ++   
Sbjct: 277 EKNSFNFYIFDKIDQPDVIYKGKFNFKPFYANLEGNQNEINFNYLFGTNAIIAQLLKTEI 336

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
           +   +   +   + +  +         +  +    + + D + T F
Sbjct: 337 F--NNTNIDFKLNINADSIYKNSNFKNIKLNSKIQDGLIDTDNTKF 380


>gi|126735608|ref|ZP_01751353.1| hypothetical protein RCCS2_17071 [Roseobacter sp. CCS2]
 gi|126714795|gb|EBA11661.1| hypothetical protein RCCS2_17071 [Roseobacter sp. CCS2]
          Length = 1095

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/351 (11%), Positives = 87/351 (24%), Gaps = 40/351 (11%)

Query: 29  WTDFREDFERQATLIV-GKKIAVKGGIKIHILPF--PSVFFKDIRIDQKEDGSFESKIEG 85
            +   E  E +A  ++ G ++   G I + I     P+V   D R+     G   S +  
Sbjct: 54  PSWIIERIEARADDVLEGARLEF-GAITVRIGRDLHPTVRLVDTRLVDA-GGLTLSSVPI 111

Query: 86  LSMRAEFLP-LLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR----------------- 127
           +         +L  E+ + D+ +    +N   +  G  ++                    
Sbjct: 112 VEGLMSPRGLILQQEVLMQDVRLIGAQVNLRRARDGSVSFALTTGGNDLGQARSLPELLE 171

Query: 128 --KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
                 +      LE +   G  +   D  + + + +    + +  R        +   +
Sbjct: 172 QFDQVFERPALEALETVRADGLIVNFDDARAGRSWIVDGGRVSLDLRGGETTIRGNFALL 231

Query: 186 KGSVIA-----------EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
            G                    F        +  +  A++ A+     L  +   I   L
Sbjct: 232 SGGTNVTTVRLNYTSPRGSRAAFMGLNLDNALATDIAAQSPALR---WLQGVDAQITAAL 288

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
              L         +    +     +                F        IS  +L    
Sbjct: 289 RTQLDETGALGPLNASLEIGQGVLQPNPATQPIGFDDAKAYFTYDPVRDSISFNELSLET 348

Query: 295 PNSSTDEDNKTKV-SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND 344
                  D    +    +            S   LN   FFE   +  +  
Sbjct: 349 EWGRLRADGDAYLRDFRDGLPRALLAQFRFSDLVLNPPGFFETPPEIPQAA 399


>gi|220910219|ref|YP_002485530.1| hypothetical protein Cyan7425_4866 [Cyanothece sp. PCC 7425]
 gi|219866830|gb|ACL47169.1| protein of unknown function DUF490 [Cyanothece sp. PCC 7425]
          Length = 1601

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/327 (11%), Positives = 88/327 (26%), Gaps = 32/327 (9%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG--------SFES 81
            +     E   + ++ + + +    +I +    S+ F    I                 +
Sbjct: 50  NELAPTIETNLSQLLNRPVKLGKLEQITL---TSLRFDRTTIPPFSQQVGGQTIREQDSA 106

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN-VILE 140
               + +      LL        + + QP LN     +G     Q +           L+
Sbjct: 107 MAAAVEVNFNPWDLLWSRSLNLAVSLKQPQLNLVQDKEGRWLRTQLQPLKPSGWFTTNLQ 166

Query: 141 KIHVKGGRIK-IIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK-GSVIAEGTGNFD 198
            I V+  +I  +    + +       N+ ++ +   +   L    ++ G +  +G     
Sbjct: 167 SIQVQQAQITALPYGANPRQLTGVQGNVLLADQGQRLRFDLQGQVVQGGDLKLDGEWRNP 226

Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPLAYPI----------IIDLFGNLFW---NEKQP 245
            +     +     A     +L  +                     +  NL       + P
Sbjct: 227 AQDLKLTLRTRNLAATVVNNLFPEQKVAPVVGGPPVDVVQIQRGQVDSNLRLYLRQGELP 286

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR---YKLQSILPNSSTDED 302
              G   V     KL+N+  S +  R+ G  ++      + +   +     L       D
Sbjct: 287 QVEGTAQVRDLALKLVNVPQSLQ--RIEGQVRLQGLTAVLEQGKGFFGDIPLKGVRGTID 344

Query: 303 NKTKVSQDEENLLNFSENGAESMHDLN 329
            +          +  + +       L 
Sbjct: 345 QQGFNLSGHIPPVEVNRSLKTLALKLT 371


>gi|28056403|gb|AAO28296.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
          Length = 1286

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/286 (10%), Positives = 79/286 (27%), Gaps = 21/286 (7%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92
           +      ++  G+ +     +        P +  + +RI        +  I  + M    
Sbjct: 56  QQVADWLSVRAGQPVRFD-TLSTSWTQRGPLLRLQGVRI----GPQGKVGIGQVEMLVAM 110

Query: 93  LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN---VILEKIHVKGGRI 149
              +     + ++ +    L  +  S G  + +     ++         L ++ V GGR+
Sbjct: 111 YTGILPGHSLIELRLRGVALTVHRDSAGRWSVYGLPRDVEGDPLEVLRRLGELQVIGGRL 170

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN 209
            +    S     LS +NL++      + + +            G  +FD       +   
Sbjct: 171 SVDAPSSGVSTTLSQINLRVRVAGDRLRAGVHGWLDSARAPVTGVVDFDRVSGDGDVYVE 230

Query: 210 FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI-----YSGVFSVAGDFSKLLNLE 264
                 A    +    +    + D  G++    +         +    + G   +   L 
Sbjct: 231 TLPNQLASWSSLLAGVMRGVHLRDGAGHVRVWAQLHRHHVEQVTVQGDLQGVRFEGGRLA 290

Query: 265 LSAKKSR-------LSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
                 R       +   ++      R+   +L+          D 
Sbjct: 291 GQTVVPRVFWPQLQVLVRWQRQGDGWRVVAPRLRMGESRRLQKLDG 336


>gi|88797989|ref|ZP_01113576.1| hypothetical protein MED297_01095 [Reinekea sp. MED297]
 gi|88779186|gb|EAR10374.1| hypothetical protein MED297_01095 [Reinekea sp. MED297]
          Length = 625

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/145 (10%), Positives = 43/145 (29%), Gaps = 3/145 (2%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++         F +       + L       ++  E     + G ++ V   + + + P 
Sbjct: 1   MKLFRWSGLIGFVLFTAVLMIIGLLFLDGWTKKAVEAAGFQVNGAEVTVA-DVDLTLSP- 58

Query: 62  PSVFFKDIRIDQKED-GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
               F+ + +   +D      +I  + +   F  L  G +R+ D+ +          +  
Sbjct: 59  LGFRFEQVAVADADDPMRNAVEIGQMRLAINFAQLFLGNVRLEDVTVADVQTRTEREAPA 118

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVK 145
                    +        + +  V+
Sbjct: 119 RLAESAENDSDSAGAEPSVAEQQVE 143


>gi|51245490|ref|YP_065374.1| hypothetical protein DP1638 [Desulfotalea psychrophila LSv54]
 gi|50876527|emb|CAG36367.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 1130

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 85/289 (29%), Gaps = 27/289 (9%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDG 77
           G F VP +I     +             K+ ++  +K +   F  S+   +I+     + 
Sbjct: 66  GFFAVPYYI-----KNVLPEYVAAHSEFKLEIE-EVKANPFSFEISIIKAEIKKPGANNH 119

Query: 78  S-FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR--------- 127
                 I+ LS   E L LL  +       ++  HL        + N+            
Sbjct: 120 QAPLLSIDSLSTAIEPLGLLHKKFTSRRSTLNGVHLALKKEGANLYNFGSLFKDKNGKLI 179

Query: 128 ---KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
               +  + +       I ++ G     D    Q +   D+ + +               
Sbjct: 180 TNIAAIKESLFLFSFNNIVMENGSFVFQDIPGKQTHHGKDIKISLPTINNFDSGTEITTK 239

Query: 185 IKGSVIAEGT-GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243
              S I  G+  +F           +   K+  + L     PL  P  I           
Sbjct: 240 PYFSAIINGSPIHFSKNSYGKDSRISCEVKDLDLPLYFSYLPLHIPFEI------KSGLG 293

Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                  F+   +  + L L ++   + ++        ++ I R ++++
Sbjct: 294 TGSIDLFFNSTENSVETLTLGMNITATNITLRHNSKKASINIPRSQIRA 342


>gi|302341921|ref|YP_003806450.1| AsmA family protein [Desulfarculus baarsii DSM 2075]
 gi|301638534|gb|ADK83856.1| AsmA family protein [Desulfarculus baarsii DSM 2075]
          Length = 766

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 82/268 (30%), Gaps = 20/268 (7%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAE 91
           +   +      G++  V+  I + +L    +  K +RID      G    K++ L +   
Sbjct: 35  DMAVQAIHEHTGRQARVE-SIDLRLLGGAELEVKGLRIDDLPRFGGRPLLKLDRLLVEFG 93

Query: 92  FLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI 151
            LPLL+ ++ +  + +D   L+     +G  N     +           +          
Sbjct: 94  LLPLLTRKVDLGQVLVDGLELSLVRDQQGALNTDFAAAQPPADQPAAPPETPPAEAPAAD 153

Query: 152 IDQESD---QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208
                    +   +S   + ++       + L +   + +   +        + A     
Sbjct: 154 EPHAGSLIVRRLAISGSTIFLANLATGSQASLPLQKAELTTEFDAQTPLIQAQLAM-PGL 212

Query: 209 NFPAKNKAIS----LKIQLFPLAYPII-------IDLFGNLFWNEKQPIYSGVFSVAGDF 257
              A     S    LK ++               ++L G L              V    
Sbjct: 213 GIEASGGQASAPAELKAEIDLAQLGQRLIVVWPGLELAGELKLAAAAVGPDNQ-KVINAS 271

Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRI 285
            + LNL +S+        F+++D ++ +
Sbjct: 272 CRALNLRISSPTPG-QAPFELADADLTL 298


>gi|296535642|ref|ZP_06897820.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
 gi|296264037|gb|EFH10484.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
          Length = 1058

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 73/270 (27%), Gaps = 43/270 (15%)

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             +  + + +           +   S+   F  LL G++    + + QP +    S +G 
Sbjct: 74  LRLRLQQVELRDAAGAV-RQSLPDASITLSFARLLQGQLAPLQVAVRQPAIVLERSPEGE 132

Query: 122 SNWFQRKSTMDMIHNVI---------------------------LEKIHVKGGRIKIIDQ 154
                 ++                                    L ++ +  GR+ IID+
Sbjct: 133 VTLSMGRAGPPAEPPPDSGGHDDEGGAVLRDLLGRGGGDGRFGALRELSISEGRLSIIDR 192

Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214
           + +  + L   N+ +       +      + +  ++  G G     R       + P+  
Sbjct: 193 QLNLTWQLERANIALRRLPEGGVG----GTGEAELVLPGHGGTLPVRLEGSARGDGPSLE 248

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274
             + L     P   P  I               S    ++G F    +         L+ 
Sbjct: 249 GKLVL-----PALEPARIATLLPALAPLSLFDGSAALELSGRF----DAGRDGAAPELAL 299

Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNK 304
                 G V +   +  +   +   + +  
Sbjct: 300 RLSAGPGGVTLEGRR--TGFADLQLEAEGT 327


>gi|148242023|ref|YP_001227180.1| hypothetical protein SynRCC307_0924 [Synechococcus sp. RCC307]
 gi|147850333|emb|CAK27827.1| Conserved hypothetical protein [Synechococcus sp. RCC307]
          Length = 1387

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 51/160 (31%), Gaps = 5/160 (3%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGL 86
            D   F    E+Q +  +   + +   +   +     + F   R+        +  +E L
Sbjct: 29  WDAEGFHNWLEKQLSAGLNHPVELGPLLGFGLQ---GLEFGPTRVLPSASDGSQMSVERL 85

Query: 87  SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG 146
           ++  + +  +     V  + +    +    +++G   W   +        + L+   +  
Sbjct: 86  TLLPDLISSVRQGSAVAQIGLGNLRMQLQRNAQGRL-WTFPQLAGQAPPRLRLKLQLLDA 144

Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186
            +  + D      +    L+L ++++ L          + 
Sbjct: 145 AQFSL-DGARPWRFTGGRLDLNLASQQLRFGGAFRPKGLG 183


>gi|15597904|ref|NP_251398.1| hypothetical protein PA2708 [Pseudomonas aeruginosa PAO1]
 gi|107102231|ref|ZP_01366149.1| hypothetical protein PaerPA_01003283 [Pseudomonas aeruginosa PACS2]
 gi|116050693|ref|YP_790487.1| hypothetical protein PA14_29120 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218891131|ref|YP_002439997.1| hypothetical protein PLES_23961 [Pseudomonas aeruginosa LESB58]
 gi|313107764|ref|ZP_07793944.1| hypothetical protein PA39016_001080024 [Pseudomonas aeruginosa
           39016]
 gi|9948783|gb|AAG06096.1|AE004699_1 hypothetical protein PA2708 [Pseudomonas aeruginosa PAO1]
 gi|115585914|gb|ABJ11929.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218771356|emb|CAW27123.1| hypothetical protein PLES_23961 [Pseudomonas aeruginosa LESB58]
 gi|310880446|gb|EFQ39040.1| hypothetical protein PA39016_001080024 [Pseudomonas aeruginosa
           39016]
          Length = 361

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/335 (11%), Positives = 95/335 (28%), Gaps = 21/335 (6%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI--DQKEDGSFESKIEGLSMR 89
            R+    +   +   +  +   + + +    +     + I  D  +          + + 
Sbjct: 30  VRDYLNGKLADMGDYRGHIA-DVDLALWRG-AYRIDGLSIVKDNGKVPVPFLDAPSIDLS 87

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNFY-----LSSKGVSNWFQRKSTMDMIHNVILEKIHV 144
             +  L      V  +  ++P LNF        +         +  +D +  + L ++ V
Sbjct: 88  VSWQALWDDHAVVARVVFERPQLNFVDAGGDRDASQTGAGTDWREQLDKLLPITLNEVRV 147

Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN-FDNKRSA 203
             G ++  +  S     L    L  S   L  ++    +        EGT          
Sbjct: 148 VDGTLRFRNFTSKPPVNLHASALNASIYNLTNVADARGER---PARLEGTARILGQAPLE 204

Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDFSKL 260
                +  +  +   L++++  +    + D     G   +N                   
Sbjct: 205 VAAHFDPLSDFEDFDLRLRVTRVELKRLNDFASAYGKFDFNAGTGDLVLEAQAKRGQLDG 264

Query: 261 LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320
               L       +    + DG+  + R   ++++    T   N+ K        L+ + +
Sbjct: 265 YIKPLLRDVDVFNWRQDVEDGDKNLFRSVWEALVGGGETVLKNQRKDQFATRVSLSGNIH 324

Query: 321 -----GAESMHDLNETDFFEEEEKKNKNDDLKKDD 350
                  ++   +    F E    + +     +DD
Sbjct: 325 QRDVSAFQAFLGILRNAFVEAFNARFERSPATRDD 359


>gi|152988650|ref|YP_001349339.1| hypothetical protein PSPA7_3985 [Pseudomonas aeruginosa PA7]
 gi|150963808|gb|ABR85833.1| hypothetical protein PSPA7_3985 [Pseudomonas aeruginosa PA7]
          Length = 361

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 83/304 (27%), Gaps = 16/304 (5%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMR 89
            R     +   +   +  +   + + +    +     + I +             G+ + 
Sbjct: 30  VRGYLNDRLANMGDYRGHIA-DVDLALWRG-AYRIDGLSIVKDNGRVPVPFLDAPGIDLS 87

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNFY-----LSSKGVSNWFQRKSTMDMIHNVILEKIHV 144
             +  L      V  +  ++P LNF        +         +  +D +  + L+++ V
Sbjct: 88  VSWRALWQDHAVVARVVFERPQLNFVDAGGDREASQTGAGTDWREQLDKLLPITLDEVRV 147

Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN-FDNKRSA 203
             G ++  +  S     L    L  S   L  ++             EGT          
Sbjct: 148 VDGTLRFRNFGSKPPVNLRASALDASIYNLTNVADAQGQR---PAHLEGTARILGQAPLE 204

Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDFSKL 260
                +  +  +   L++++  +    + D     G   +N                   
Sbjct: 205 VTARFDPLSDFEDFDLRLRVTGVELKRLNDFASAYGKFDFNAGSGDLVLEAHAKRGQLDG 264

Query: 261 LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320
               L       +    + D +  + R   ++++    T   N+ K        L+ +  
Sbjct: 265 YIKPLLRDVDVFNWRQDVEDSDKNLFRSVWEALVGGGETALKNQRKDQFATRVELSGNVR 324

Query: 321 GAES 324
             + 
Sbjct: 325 QRDI 328


>gi|330503979|ref|YP_004380848.1| hypothetical protein MDS_3065 [Pseudomonas mendocina NK-01]
 gi|328918265|gb|AEB59096.1| hypothetical protein MDS_3065 [Pseudomonas mendocina NK-01]
          Length = 360

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/339 (11%), Positives = 94/339 (27%), Gaps = 22/339 (6%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMR 89
            R+    +   +   +  +   I +      +    ++ I ++             + + 
Sbjct: 30  IRDYLNDKLAEMGDYRGHIA-DIDLAWWRG-AYRINELTIVKETGDVPVPLLDAPLIDLS 87

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH--------NVILEK 141
             +  L      V +++ ++P LNF     G  N    ++               + L +
Sbjct: 88  VSWPALWREHAVVAEVFFERPQLNFV---DGGDNDQATQTGAGTDWRDQLNKLLPITLNE 144

Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG-NFDNK 200
           + V  GRI   +  +D    LS   +  S   L  +     D +      EG     ++ 
Sbjct: 145 LRVIDGRISFHNFTTDPQVELSADKVNASLYNLTNVGDEPGDRVAH---FEGRALLLEHA 201

Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDF 257
               + T +   + +   L+++   +      D     G   +                 
Sbjct: 202 PLEAEATFDPFEQFEDFELRLRAKDIDLTRFNDFARAYGRFDFKRGNGDLVIEAQAKNAQ 261

Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317
                  L            + D +  + R   ++I+  S T   N+ +        L+ 
Sbjct: 262 LNGYIKPLLRDVEVFDWEQDVEDEDKGVLRSIWEAIVGGSETLLKNQRRDQFATRVELSG 321

Query: 318 SENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356
           S +  ++               +      ++   Q   N
Sbjct: 322 SVHNQQTSAFQAFIAILRNGFVEAFTPRYERPPPQQDGN 360


>gi|251793725|ref|YP_003008455.1| hypothetical protein NT05HA_2054 [Aggregatibacter aphrophilus
           NJ8700]
 gi|247535122|gb|ACS98368.1| hypothetical protein NT05HA_2054 [Aggregatibacter aphrophilus
           NJ8700]
          Length = 912

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 86/305 (28%), Gaps = 33/305 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI--- 58
           ++R L  L  L  +++     +P +I      +  E  A   +     ++   + H+   
Sbjct: 1   MKRWLYALLGLIVLLVAIVCLLPWWITP----KQVENLANRFLAPDYELQLPERWHLQTT 56

Query: 59  ---LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
              LP   V      I    +           +   +      E+    +     + +  
Sbjct: 57  GLQLPELEVRTSQCAIATFGN-----------VHINWWEPRRLEVAHASLDYKCLN-SLP 104

Query: 116 LSSKGVSNWFQRKS--TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
            S+          +  +      V ++ + +   + ++      +     ++        
Sbjct: 105 SSNDNTKTPLNLTALFSAIPSAEVSIQHLQLVNSK-ELNVPPIVRQLLDPNVAATAHYDG 163

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN---FPAKNKAISLKIQLFPLAYPI 230
             +    +  +   ++I         +   F+        P   +   L          +
Sbjct: 164 NRLQLTANAKADDDNLILHHQSTLARENDTFRWQGQTDYQPLDGQTYHLHFSTQLKDEML 223

Query: 231 IIDLFGNLFWNEKQPIYS-----GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
            +   G L ++ +   +S       F+  G+  ++   +LS  K  L   F  +   + I
Sbjct: 224 QLPHQGELRFDWQNTDFSVSKGTLQFNWNGEKGQINAQDLSRNKPLLDVPFTFTSDGLAI 283

Query: 286 SRYKL 290
           +    
Sbjct: 284 NWGTF 288


>gi|116751191|ref|YP_847878.1| membrane protein-like [Syntrophobacter fumaroxidans MPOB]
 gi|116700255|gb|ABK19443.1| membrane protein-like [Syntrophobacter fumaroxidans MPOB]
          Length = 1234

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 87/301 (28%), Gaps = 28/301 (9%)

Query: 21  FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK--DIRIDQKEDGS 78
           F     I     RE          G  I  +  +++  LP P +      + +  K DG 
Sbjct: 27  FIASRVIGLESVREKLLTDVREQTGLHIEFR-KLELSFLPTPRLLIHSGGLTLPGKLDG- 84

Query: 79  FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVI 138
               ++ L +    LPL  GE++   + ++ P  +  L    V    +  S         
Sbjct: 85  ---TVDTLVLVPRLLPLFKGELKADIIRLESPKFSITLPQPRVEAQPEPTSFSRRSAEKG 141

Query: 139 LE-------------KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
           +               I +  G  +  D      ++  ++N + +     +         
Sbjct: 142 VRALISLLKPETHEITIRITNGSFECRDAA-GSRFWFREVNARAAMTSERLELSADCMRS 200

Query: 186 KGSVIAEGTGNFDNKRSAFKITA---NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN- 241
                   +G  + +  +         F  +     L            +DL   L    
Sbjct: 201 NLWESLIVSGWMNPRDLSSSGRVILHGFSPEPLWAYLFPGAAMRFGESRLDLDATLVSEG 260

Query: 242 --EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
               +  + G   +        + +L+ K   + G+F +    + I   +L  + P ++ 
Sbjct: 261 PRNMRAFFQGSAPIVTLIETD-DDQLALKGGAVQGSFALEGRRLEIDLTRLDFLYPQANL 319

Query: 300 D 300
            
Sbjct: 320 T 320


>gi|237749229|ref|ZP_04579709.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
 gi|229380591|gb|EEO30682.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
          Length = 1244

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/349 (12%), Positives = 96/349 (27%), Gaps = 31/349 (8%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF 79
              +  F+      +   ++     G  I ++G   +      S   + I     E    
Sbjct: 16  VGGLVWFVSQEWALQWIVQRVVQASGGDIEIQG---VSGTLASSFEIERISYTSPERD-- 70

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG--VSNWFQRKSTMDMIHNV 137
             ++  L    +   LLSG++ +  +   +  ++   SS                MI  V
Sbjct: 71  -IEVTDLQFDWQPWQLLSGQLDIGKISASKLVIDMKKSSDEPFKMPQSLAPPVAIMISGV 129

Query: 138 ILEKIHVKGG-------RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
            ++ + V G         +          + L +L         +I   L          
Sbjct: 130 NVDTVSVSGMGVGVELKDVHFSLTADRNGWELKNLGFDSPFGNASINVDLETT---QPFK 186

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250
             GT  FDN+ +  K TA+        +L +      Y     L   +         S  
Sbjct: 187 IRGTLQFDNELA--KATASLKLGGDLNNLYVSGNLDGYDAKAKLEAVVTPFAPFVFQSVH 244

Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKIS-----DGNVRISRYKLQSILPNSSTDEDNKT 305
            S  G       +E S  +++ +    ++          +S    +    + +    +  
Sbjct: 245 LSAKGIDPS--RIESSWPQAQFNAEIHVTAHEDKTLKGSVSVDNSKPGPFDENYLPIHSV 302

Query: 306 KVSQDEENLLNFSENGAESMHDLNETDFFEEEE-KKNKNDDLKKDDIQY 353
           K            ++      D+ +   F        +  ++     ++
Sbjct: 303 KAKIAGNVDNVLIDDVL---LDMGKAGQFAGNGQFSTEKTEVTLKTSRF 348


>gi|328544414|ref|YP_004304523.1| hypothetical protein SL003B_2796 [polymorphum gilvum SL003B-26A1]
 gi|326414156|gb|ADZ71219.1| hypothetical protein SL003B_2796 [Polymorphum gilvum SL003B-26A1]
          Length = 1450

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/399 (12%), Positives = 96/399 (24%), Gaps = 53/399 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV---GKKIAVKGGIKIHI 58
           LRRVL GL +    +      +   +         ER     +   G +  V G   + I
Sbjct: 4   LRRVLKGLAYTALALGASVVALGALLPTPLGGIVIERIVNAALEGDGGRTTVSG---VGI 60

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL--NFYL 116
                +    + +           +  L +      LL+GE  V  +     H+      
Sbjct: 61  GWTGDLRVDAVTVADAAG--PWLTLADLRLDWRPSRLLAGEAFVDTLTAGAVHVARRPVA 118

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS------------- 163
           ++ G ++   R      +    L    +    I++    +     L+             
Sbjct: 119 AADG-NDGADRSEGSLSLPVPRLRLERLAVAEIRLAAPVAGTPLTLTASGSARIDDDPQI 177

Query: 164 -----------------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKI 206
                               +  +     +   L +   +G ++A      D      ++
Sbjct: 178 VRATLDIRRADGTAGTIGARIDFAPGDGRLGFDLDVSEPRGGLVARLMEIPDLPALDIRL 237

Query: 207 TANFPAKNKAISLKIQLFP---LAYPIIIDLFGNLFWNEKQPIYSGVFS--------VAG 255
             + P  +    L + L     +     +   G                        + G
Sbjct: 238 AGDGPLDDWGADLTVALDGRQTVTGTARLGTDGAGRMLSVDLDGDLAPLAPPVAAAFLLG 297

Query: 256 DFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL 315
                    L+A    LSG   ++   VR+          +          V      L+
Sbjct: 298 STELKGEARLNASFEFLSGRLSLTTQTVRLDA-DGGLDPLSQQLSGKGTLSVGAGGGALI 356

Query: 316 NFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYS 354
               +G          +          N  L     Q S
Sbjct: 357 ALDIDGRRVAFGAVSAELTLSGALSKANWTLAATATQLS 395


>gi|296388825|ref|ZP_06878300.1| hypothetical protein PaerPAb_11780 [Pseudomonas aeruginosa PAb1]
          Length = 361

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 86/304 (28%), Gaps = 16/304 (5%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI--DQKEDGSFESKIEGLSMR 89
            R+    +   +   +  +   + + +    +     + I  D  +          + + 
Sbjct: 30  VRDYLNGKLADMGDYRGHIA-DVDLALWRG-AYRIDGLSIVKDNGKVPVPFLDAPSIDLS 87

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNFY-----LSSKGVSNWFQRKSTMDMIHNVILEKIHV 144
             +  L      V  +  ++P LNF        +         +  +D +  + L ++ V
Sbjct: 88  VSWQALWDDHAVVARVVFERPQLNFVDAGGDRDASQTGAGTDWREQLDKLLPITLNEVRV 147

Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN-FDNKRSA 203
             G ++  +  S     L    L  S   L  ++    +        EGT          
Sbjct: 148 VDGTLRFRNFTSKPPVNLHASALNASIYNLTNVADARGER---PARLEGTARILGQAPLE 204

Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDFSKL 260
                +  +  +   L++++  +    + D     G   +N                   
Sbjct: 205 VAAHFDPLSDFEDFDLRLRVTRVELKRLNDFASAYGKFDFNAGTGDLVLEAQAKRGQLDG 264

Query: 261 LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320
               L       +    + DG+  + R   ++++    T   N+ K        L+ + +
Sbjct: 265 YIKPLLRDVDVFNWRQDVEDGDKNLFRSVWEALVGGGETVLKNQRKDQFATRVSLSGNIH 324

Query: 321 GAES 324
             + 
Sbjct: 325 QRDV 328


>gi|320108504|ref|YP_004184094.1| hypothetical protein AciPR4_3346 [Terriglobus saanensis SP1PR4]
 gi|319927025|gb|ADV84100.1| hypothetical protein AciPR4_3346 [Terriglobus saanensis SP1PR4]
          Length = 559

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/282 (9%), Positives = 77/282 (27%), Gaps = 20/282 (7%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           + V    G LF ++++    V   ++    R+      +      + +   + I      
Sbjct: 21  KWVAGVTGGLFLLLVLAFIYVAKHLEP-ILRKRVVDTLSARFHSPVELD-ELHIGASKGF 78

Query: 63  SVFFKDIR---IDQKEDGS-----FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            V    +R   I    D          +++       +   L   +R+ ++ +    L+ 
Sbjct: 79  GVTGSGLRVMYIVNTNDQGKQRVLPMLEVQEFEFHTSYKAFLRQPMRIGNVIVRGVRLHL 138

Query: 115 YLSSK------GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
              ++         N  ++++      +V +++I V    + +   +  ++    D+   
Sbjct: 139 PPGTQRAGPLLKQGNDKRKETNEAPKESVFVDRIFVHDAVVVMETDKPGKLPLEFDVQRV 198

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-NKAISLKIQ--LFP 225
           +   +     P   ++   +    G  +       +          +   S         
Sbjct: 199 VLTEYARTQ-PFRYEATLVNPKPVGDIHAVGHFGPWNADDPRQTPLDGDYSFDHADMNTI 257

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA 267
                 +   G      +     G   V      + N  +  
Sbjct: 258 KGLGGTLSAKGKFGGVLEGITTDGEADVPDFSLDVSNHPVPL 299


>gi|254235687|ref|ZP_04929010.1| hypothetical protein PACG_01623 [Pseudomonas aeruginosa C3719]
 gi|126167618|gb|EAZ53129.1| hypothetical protein PACG_01623 [Pseudomonas aeruginosa C3719]
          Length = 361

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/335 (11%), Positives = 95/335 (28%), Gaps = 21/335 (6%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI--DQKEDGSFESKIEGLSMR 89
            R+    +   +   +  +   + + +    +     + I  D  +          + + 
Sbjct: 30  VRDYLNGKLADMGDYRGHIA-DVDLALWRG-AYRIDGLSIVKDNGKVPVPFLDAPSIDLS 87

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNFY-----LSSKGVSNWFQRKSTMDMIHNVILEKIHV 144
             +  L      V  +  ++P LNF        +         +  +D +  + L ++ V
Sbjct: 88  VSWQALWDDHAVVARVVFERPQLNFVDAGGDRDASQTGAGTDWREQLDKLLPITLNEVRV 147

Query: 145 KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN-FDNKRSA 203
             G ++  +  S     L    L  S   L  ++    +        EGT          
Sbjct: 148 VDGTLRFRNFTSKPPVNLHASALNASIYNLTNVADARGER---PAHLEGTARILGQAPLE 204

Query: 204 FKITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDFSKL 260
                +  +  +   L++++  +    + D     G   +N                   
Sbjct: 205 VAAHFDPLSDFEDFDLRLRVTRVELKRLNDFASAYGKFDFNAGTGDLVLEAQAKRGQLDG 264

Query: 261 LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320
               L       +    + DG+  + R   ++++    T   N+ K        L+ + +
Sbjct: 265 YIKPLLRDVDVFNWRQDVEDGDKNLFRSVWEALVGGGETVLKNQRKDQFATRVNLSGNIH 324

Query: 321 -----GAESMHDLNETDFFEEEEKKNKNDDLKKDD 350
                  ++   +    F E    + +     +DD
Sbjct: 325 QRDVSAFQAFLGILRNAFVEAFNARFERSPATRDD 359


>gi|253699718|ref|YP_003020907.1| hypothetical protein GM21_1088 [Geobacter sp. M21]
 gi|251774568|gb|ACT17149.1| protein of unknown function DUF490 [Geobacter sp. M21]
          Length = 1485

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/332 (12%), Positives = 106/332 (31%), Gaps = 39/332 (11%)

Query: 2   LRRVLIGLGF-LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIA---VKGGIKIH 57
           +RRV + LG  + ++ L     +   +  +              G +++   V+G ++  
Sbjct: 1   MRRVALYLGGAVLALALTVFAGLIWLVGTSSGARFALTTLDRFAGVEVSVQKVEGRLRDR 60

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
           +        + + + +        ++E L +  +   L  G++ V ++ +    +     
Sbjct: 61  L------ILRGVTVSRP---RMLVRVEELRLVWDPERLSGGKLLVHELALRGVRI----- 106

Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
                +    +   ++    + E +      +          + L DL+ +   +  + +
Sbjct: 107 ---QDDTPLSEKAPELRWPQVSEVVRRIDAEVT--------RFSLKDLSYRHLQQPPSQL 155

Query: 178 SPL--SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
             L  S+   +G++   G G+    +              ++SL ++L P     + D+ 
Sbjct: 156 KELAASLALRQGTLTLTG-GSISASQGTASGELAAGLWRPSLSLDLRLNPS--AAVADMD 212

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
                 +  P  +    +AG    +      A +  L     I+     +   KL  + P
Sbjct: 213 AFFVQAKLSPGTAPE-QMAGP-LAIAGKRGGAPRLELESVLGITGTGFNLRNLKL--VRP 268

Query: 296 NSSTDEDNKTKVSQ-DEENLLNFSENGAESMH 326
                      ++    E L   +   AE   
Sbjct: 269 GRRGTLSGSASMTLTRTEPLFTLALRAAELDL 300


>gi|254226002|ref|ZP_04919602.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125621458|gb|EAZ49792.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 933

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           L R+L+ L     +VL  A T    +      F+ + +         ++A+         
Sbjct: 8   LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113
             PS+  + ++    +    +     + +  + L  L   +  V D+ ++   L+     
Sbjct: 68  THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127

Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168
                 +     +   R    +D +    L+   +K   I       D +   +  L  Q
Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
                      +SI  I       S      G+  +    F ++A+       ++  ++ 
Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281
                   + L         QP   G            N E + +    SG    K ++ 
Sbjct: 248 QTGIQKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
             +++ + L+ +  +          +    +     + +     
Sbjct: 307 GWQVNAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 348


>gi|229589062|ref|YP_002871181.1| hypothetical protein PFLU1539 [Pseudomonas fluorescens SBW25]
 gi|229360928|emb|CAY47788.1| putative membrane protein [Pseudomonas fluorescens SBW25]
          Length = 358

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/347 (9%), Positives = 91/347 (26%), Gaps = 27/347 (7%)

Query: 21  FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF- 79
             +P  +     R     +   +   +  V   + + +    +     ++I + +     
Sbjct: 24  IALPYLV-----RNYLNEKLADMGDYRGQVA-DVDLALWRG-AYRINGLQIVKVDGKVPV 76

Query: 80  -ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN-- 136
              K   +     +  L      V + +  +P +NF     G +N    ++         
Sbjct: 77  PFVKAPLIEFAVSWHSLWYDHAVVAEGHFVRPEINFV---DGGANKQASQTGKGTDWQEQ 133

Query: 137 ------VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 + L ++ ++ G+I   +  S     ++  ++  S   L  +  +          
Sbjct: 134 LSKLLPITLNEVRIEEGKIAFHNFSSKPQVNINATDVNASFFNLTNVVDVKGKRDA---R 190

Query: 191 AEGTGNFDNK-RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPI 246
            EG      +       T +  +  +    + +   L    + D     G   +      
Sbjct: 191 FEGKALLQGQAPLEATATFDPLSDFEEFEFRFRAKDLQLKRMNDFASAYGKFDFKAGTGD 250

Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
                             L            + + +  I R   ++++  S T   N++K
Sbjct: 251 VVIEAQAEKGQLTGYIKPLLRDVEVFDWKQDVENKDKNIFRSIWEAVVGASETVLKNQSK 310

Query: 307 VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353
                   L+ S +                   +  N   ++     
Sbjct: 311 NQFATRVELSGSVHQQNVSAFSAFLAILRNGFIQAFNARYEQPKPSA 357


>gi|238928125|ref|ZP_04659885.1| protein of hypothetical function DUF490 [Selenomonas flueggei ATCC
           43531]
 gi|238884085|gb|EEQ47723.1| protein of hypothetical function DUF490 [Selenomonas flueggei ATCC
           43531]
          Length = 1444

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 84/292 (28%), Gaps = 19/292 (6%)

Query: 36  FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95
            ER     +G  + + G ++I  L    +   DI I  K+      + +   +    L L
Sbjct: 39  AERIVAQRLGTDVHI-GAVEIRSLH--ELTIDDIVIYDKQ-TEEVLRADRARVTLRLLSL 94

Query: 96  LSG-EIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQ 154
           L   E  V ++ +   H++      G  N+    +         + +I +          
Sbjct: 95  LLSPETSVDEVLLTGAHVHLVRREDGSWNYADLVADDAEPSTF-VGRIRIADS--AADVD 151

Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG--TGNFDNKRSAFKITANFPA 212
                Y L+DL+              S + +   + A G  T +  + + A       P 
Sbjct: 152 ADGHSYVLTDLSGAADIDRGAFSYDASAEFMGIPLRARGEKTSDVQDVQFAADDADLTPL 211

Query: 213 KNKAISLKIQLFPLAYPIIID-LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR 271
            +      +        +  D +   L   +      G        + L   + +     
Sbjct: 212 LSLLPETVLPERVKISTLHADRVRTRLRLVDGARTMEGRIDGVRADADLYGTQTTLT--- 268

Query: 272 LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
            S   +  +  V ++     +     +   D   ++  D    L+      +
Sbjct: 269 -SAALRFDERTVFVAA---TATAAEQTARVDGTVQMDTD-APYLDLRVRAND 315


>gi|289165643|ref|YP_003455781.1| hypothetical protein LLO_2318 [Legionella longbeachae NSW150]
 gi|288858816|emb|CBJ12730.1| hypothetical protein LLO_2318 [Legionella longbeachae NSW150]
          Length = 1329

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 92/304 (30%), Gaps = 27/304 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RV + L      + V +        W   ++ + E+  +L++G+ + ++          
Sbjct: 13  KRVWMYLAVFIIFMAVFSSIFRALTPWAKEYKGEIEQHLSLLLGQPVTIQTIETGWYWFH 72

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           P +    + +   +D +    +  L +       L + +I+   +YID  HLN       
Sbjct: 73  PVLKLNQVTLG--DDSNKNFHVNKLLVGINLFKSLWNWQIQPGVLYIDDMHLNL-REKDA 129

Query: 121 VS------------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
                         +    K+   +I     E++ +K         +   +  +  LN+ 
Sbjct: 130 HWTIDGITTNALNSDMTPEKTKQILIWLSQQERLIIKHVSAYFYFSDGG-LIPVDGLNVS 188

Query: 169 ISARFLNIISPLS---IDSIKGSVIAEGTGNFDNKRS-AFKITANFPAKNKAISLKIQLF 224
           ++    +           +        G G FD+      K    F AKN   +    LF
Sbjct: 189 VANSGGHYKFKGGARLAQTNSTDFQLLGDGYFDSDHFEEIKGRFYFSAKNIVPAQWQSLF 248

Query: 225 PLAYPIIIDLFGNLFWNEKQP-----IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
           P A   +    GN+                         +LL  + S        N    
Sbjct: 249 PQATEHLEGGKGNIALWVDMRHGSITSVQAQVDFKRLAWRLLRNQQSQLVQSFFANLSWK 308

Query: 280 DGNV 283
             NV
Sbjct: 309 PDNV 312


>gi|254291324|ref|ZP_04962118.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150422780|gb|EDN14733.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 1291

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           L R+L+ L     +VL  A T    +      F+ + +         ++A+         
Sbjct: 8   LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113
             PS+  + ++    +    +     + +  + L  L   +  V D+ ++   L+     
Sbjct: 68  THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127

Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168
                 +     +   R    +D +    L+   +K   I       D +   +  L  Q
Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
                      +SI  I       S      G+  +    F ++A+       ++  ++ 
Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281
                   + L         QP   G            N E + +    SG    K ++ 
Sbjct: 248 QTGIQKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
             R++ + L+ +  +          +    +     + +     
Sbjct: 307 GWRVNAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 348


>gi|262276891|ref|ZP_06054684.1| hypothetical protein HIMB114_0293 [alpha proteobacterium HIMB114]
 gi|262223994|gb|EEY74453.1| hypothetical protein HIMB114_0293 [alpha proteobacterium HIMB114]
          Length = 456

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 54/386 (13%), Positives = 123/386 (31%), Gaps = 30/386 (7%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWT-DFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++LI +       +      P  I++  D +   E   + ++  K+ +KG I+  + P 
Sbjct: 7   KKLLISI-LFLVFSVTAYVCSPFLINFNYDKKTGIENLISELILYKVNIKGNIQYKLYPL 65

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           PS+   ++ I   E+ S    +  + +      LL  +    ++ I+       L++   
Sbjct: 66  PSLEISEVHITNDEENS---ILNKIVLNVSIFDLLKNKFSYKNILINSGEFIINLNN--- 119

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                    +  I     +KI+ +   IK  D +          N+    + ++      
Sbjct: 120 ------LEVLSSIEEFDNKKINFEKVNIKFFDNKHSFSINEFSGNILYKNKKID-KINGK 172

Query: 182 IDSIKGSVIAEGT---GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
               +     +      +  +    FK +       K +          +P +  +F + 
Sbjct: 173 FYVGEILFKIKFKENQLSLKSPEINFKASIENFLNPKKLIKLDYNNSSIFPGVDSIFASF 232

Query: 239 FWNEKQPIYSG---VFSVAGDF-SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
            + + +  +S     F          +N         L G F+ S    +IS   L + L
Sbjct: 233 TYEQNKNKFSLITKEFETNIFSGLININNNNDKNIIVLDGYFEDSKFK-KISNTDLATFL 291

Query: 295 PNS----STDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKK---NKNDDLK 347
             +    +   D + K+S +            +        D F E+      N   ++K
Sbjct: 292 SQNLNLLANLFDGRVKLSFNNFKSDKEIFENIKFNVLFQNGDVFFEDINIYSDNNTINIK 351

Query: 348 KDDIQYSVNKKEEKDNSHDKENQENF 373
             ++ Y  +     D     +N +  
Sbjct: 352 GRNVTYQKDNLFFYDVIFSTKNLKRL 377


>gi|148244387|ref|YP_001219081.1| hypothetical protein COSY_0227 [Candidatus Vesicomyosocius okutanii
           HA]
 gi|146326214|dbj|BAF61357.1| hypothetical protein [Candidatus Vesicomyosocius okutanii HA]
          Length = 824

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/310 (12%), Positives = 91/310 (29%), Gaps = 24/310 (7%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFP 62
            V +    +  +++V   T P+       +   E Q + + G  + +   I  +      
Sbjct: 19  WVSVIFSLIIVLIVVLFVTFPIL-----LKAPIENQLSSLTGLDVRLS-KITFYFENIGI 72

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           ++   DI I   ++    + I+ LS     L L         +YID   L     +  ++
Sbjct: 73  ALQVHDIAILSNKNQQKVAIIKKLSWHVNLLNLFDNIYHSSKIYIDTLMLFSNSGNVNIN 132

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGR---------IKIIDQESDQVYFLSDLNLQISARF 173
           N     S   +      E +HV             + +       +  +   +L      
Sbjct: 133 NINNIVSLDMLEKLYFFESLHVNKIIIKHAIKITPLTLKRDGVQFLLTIPRQDLVTKYFN 192

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF-------PL 226
           +         S  G +    T   ++ +    +       +  I +   +          
Sbjct: 193 VTFSLSNVQVSRDGCLTLPITVINNDFKLVLGLKLYNQKNDDFIQITGLIKRMNVVKISD 252

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
             P+++       W ++    SG         K    +    K +++ +   ++      
Sbjct: 253 YLPVVLIGSATYQWIKQAFQ-SGTIDNINIDIKKNLSKELPAKIKINAHLTNTELLFNAD 311

Query: 287 RYKLQSILPN 296
            + L+ +  N
Sbjct: 312 WHNLKQLDAN 321


>gi|153825623|ref|ZP_01978290.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|149740653|gb|EDM54760.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
          Length = 1291

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           L R+L+ L     +VL  A T    +      F+ + +         ++A+         
Sbjct: 8   LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113
             PS+  + ++    +    +     + +  + L  L   +  V D+ ++   L+     
Sbjct: 68  THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127

Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168
                 +     +   R    +D +    L+   +K   I       D +   +  L  Q
Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
                      +SI  I       S      G+  +    F ++A+       ++  ++ 
Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281
                   + L         QP   G            N E + +    SG    K ++ 
Sbjct: 248 QTGIQKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
             +++ + L+ +  +          +    +     + +     
Sbjct: 307 GWQVNAHSLR-LRSDDELWPLLDVAMDWHPD-EWRLNLSQLNIE 348


>gi|120602703|ref|YP_967103.1| AsmA family protein [Desulfovibrio vulgaris DP4]
 gi|120562932|gb|ABM28676.1| AsmA family protein [Desulfovibrio vulgaris DP4]
          Length = 1191

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 73/264 (27%), Gaps = 14/264 (5%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE---DGSFE 80
           P  +      E+         G  +  +GG+   +LP P+V  +D+     E     + +
Sbjct: 26  PRLVSPERLAEEVRALVRERTGVVLDSRGGVTFSLLPHPAVILRDVTATVPESMFGNAAK 85

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILE 140
                +  R  +  LL G + +  + ++   + F                 D + +  + 
Sbjct: 86  GHASVIVCRPSWRSLLEGRLLLAGLELEDAVIEFE-----------MALATDGLVSGTVA 134

Query: 141 KIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200
               +     +    + Q     +     +       S L+     GS  A G   + + 
Sbjct: 135 GSAYREASETMRRAPAPQGGTGGNGIAVATPVSPAGDSVLNAPDSPGSPEAPGVPVWRDL 194

Query: 201 RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKL 260
                           I +      ++  +   +             +   S  G     
Sbjct: 195 PVGVAAFLLRDLPCDFIRITRGRIVVSDAVADGIDFVFRRAGAAAHLNLQVSRVGQSVVS 254

Query: 261 LNLELSAKKSRLSGNFKISDGNVR 284
            +   +   + +SG    S G ++
Sbjct: 255 PDAGFAVPGAAVSGEAASSGGVLQ 278


>gi|297580558|ref|ZP_06942484.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534974|gb|EFH73809.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 1291

 Score = 50.7 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           L R+L+ L     +VL  A T    +      F+ + +         ++A+         
Sbjct: 8   LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113
             PS+  + ++    +    +     + +  + L  L   +  V D+ ++   L+     
Sbjct: 68  THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127

Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168
                 +     +   R    +D +    L+   +K   I       D +   +  L  Q
Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
                      +SI  I       S      G+  +    F ++A+       ++  ++ 
Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281
                   + L         QP   G            N E + +    SG    K ++ 
Sbjct: 248 QTGIQKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
             +++ + L+ +  +          +    +     + +     
Sbjct: 307 GWQVNAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 348


>gi|153802108|ref|ZP_01956694.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|124122352|gb|EAY41095.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 1291

 Score = 50.7 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           L R+L+ L     +VL  A T    +      F+ + +         ++A+         
Sbjct: 8   LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113
             PS+  + ++    +    +     + +  + L  L   +  V D+ ++   L+     
Sbjct: 68  THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127

Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168
                 +     +   R    +D +    L+   +K   I       D +   +  L  Q
Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
                      +SI  I       S      G+  +    F ++A+       ++  ++ 
Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281
                   + L         QP   G            N E + +    SG    K ++ 
Sbjct: 248 QTGIQKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
             +++ + L+ +  +          +    +     + +     
Sbjct: 307 GWQVNAHSLR-LRSDDELWPLLDVAMDWHPD-EWRLNLSQLNIE 348


>gi|121590783|ref|ZP_01678112.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121547385|gb|EAX57499.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
          Length = 1291

 Score = 50.7 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 101/344 (29%), Gaps = 23/344 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           L R+L+ L     +VL  A T    +      F+ + +         ++A+         
Sbjct: 8   LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113
             PS+  + ++    +    +     + +  + L  L   +  V D+ ++   L+     
Sbjct: 68  THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127

Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168
                 +     +   R    +D +    L+   +K   I       D +   +  L  Q
Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
                      +SI  I       S      G+  +    F ++A+       ++  ++ 
Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281
                   + L     +   QP   G            N E + +    SG    K ++ 
Sbjct: 248 QTGIQKGQVSLNAWATFEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
             +++ + L+ +  +          +    +     + +     
Sbjct: 307 GWQVNAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 348


>gi|15640447|ref|NP_230074.1| hypothetical protein VC0420 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121727241|ref|ZP_01680400.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147673677|ref|YP_001218689.1| hypothetical protein VC0395_A2839 [Vibrio cholerae O395]
 gi|153822579|ref|ZP_01975246.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227080631|ref|YP_002809182.1| hypothetical protein VCM66_0405 [Vibrio cholerae M66-2]
 gi|254850652|ref|ZP_05240002.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|298501047|ref|ZP_07010848.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9654842|gb|AAF93593.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121630360|gb|EAX62755.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|126519883|gb|EAZ77106.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146315560|gb|ABQ20099.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227008519|gb|ACP04731.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227012274|gb|ACP08484.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|254846357|gb|EET24771.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|297540295|gb|EFH76355.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 1291

 Score = 50.7 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           L R+L+ L     +VL  A T    +      F+ + +         ++A+         
Sbjct: 8   LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113
             PS+  + ++    +    +     + +  + L  L   +  V D+ ++   L+     
Sbjct: 68  THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127

Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168
                 +     +   R    +D +    L+   +K   I       D +   +  L  Q
Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
                      +SI  I       S      G+  +    F ++A+       ++  ++ 
Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281
                   + L         QP   G            N E + +    SG    K ++ 
Sbjct: 248 QTGIQKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
             +++ + L+ +  +          +    +     + +     
Sbjct: 307 GWQVNAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 348


>gi|153830404|ref|ZP_01983071.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|148874106|gb|EDL72241.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 1291

 Score = 50.7 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           L R+L+ L     +VL  A T    +      F+ + +         ++A+         
Sbjct: 8   LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113
             PS+  + ++    +    +     + +  + L  L   +  V D+ ++   L+     
Sbjct: 68  THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127

Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168
                 +     +   R    +D +    L+   +K   I       D +   +  L  Q
Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
                      +SI  I       S      G+  +    F ++A+       ++  ++ 
Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281
                   + L         QP   G            N E + +    SG    K ++ 
Sbjct: 248 QTGIQKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
             +++ + L+ +  +          +    +     + +     
Sbjct: 307 GWQVNAHSLR-LRSDDELWPLLDVAMDWHPD-EWRLNLSQLNIE 348


>gi|153217099|ref|ZP_01950863.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124113879|gb|EAY32699.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 1291

 Score = 50.7 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           L R+L+ L     +VL  A T    +      F+ + +         ++A+         
Sbjct: 8   LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113
             PS+  + ++    +    +     + +  + L  L   +  V D+ ++   L+     
Sbjct: 68  THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127

Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168
                 +     +   R    +D +    L+   +K   I       D +   +  L  Q
Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
                      +SI  I       S      G+  +    F ++A+       ++  ++ 
Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281
                   + L         QP   G            N E + +    SG    K ++ 
Sbjct: 248 QTGIQKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
             +++ + L+ +  +          +    +     + +     
Sbjct: 307 GWQVNAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 348


>gi|167751914|ref|ZP_02424041.1| hypothetical protein ALIPUT_00156 [Alistipes putredinis DSM 17216]
 gi|167660155|gb|EDS04285.1| hypothetical protein ALIPUT_00156 [Alistipes putredinis DSM 17216]
          Length = 1536

 Score = 50.7 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 41/131 (31%), Gaps = 12/131 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--------TDFREDFERQATLIVGKKIAVKGG 53
           +RR++  L  + S +++    +PL +               +     +  +G +I++   
Sbjct: 1   MRRIVNILAKMVSAIVLALIFLPLLVALLFEIPAAQNFVAREATEIISRKLGTRISID-- 58

Query: 54  IKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113
            ++ I  F  V      + +            L  R + L L  G +      +      
Sbjct: 59  -RVDIGLFYRVSLDGFYV-EDFQRDTLLYAGRLDARIKSLGLFGGGLVFSRAELSDARFC 116

Query: 114 FYLSSKGVSNW 124
              +  G  N 
Sbjct: 117 LRETPDGEMNI 127


>gi|153818251|ref|ZP_01970918.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126511210|gb|EAZ73804.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
          Length = 1291

 Score = 50.7 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 23/344 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           L R+L+ L     +VL  A T    +      F+ + +         ++A+         
Sbjct: 8   LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN----- 113
             PS+  + ++    +    +     + +  + L  L   +  V D+ ++   L+     
Sbjct: 68  THPSLSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAID 127

Query: 114 ---FYLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQ 168
                 +     +   R    +D +    L+   +K   I       D +   +  L  Q
Sbjct: 128 WLALEQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQ 187

Query: 169 ISARFLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
                      +SI  I       S      G+  +    F ++A+       ++  ++ 
Sbjct: 188 NQGLRHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKD 247

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDG 281
                   + L         QP   G            N E + +    SG    K ++ 
Sbjct: 248 QTGIQKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEK 306

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
             +++ + L+ +  +          +    +     + +     
Sbjct: 307 GWQVNAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 348


>gi|115373652|ref|ZP_01460947.1| hypothetical protein STIAU_5844 [Stigmatella aurantiaca DW4/3-1]
 gi|310824957|ref|YP_003957315.1| hypothetical protein STAUR_7733 [Stigmatella aurantiaca DW4/3-1]
 gi|115369355|gb|EAU68295.1| hypothetical protein STIAU_5844 [Stigmatella aurantiaca DW4/3-1]
 gi|309398029|gb|ADO75488.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1228

 Score = 50.7 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/272 (7%), Positives = 58/272 (21%), Gaps = 29/272 (10%)

Query: 31  DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG----SFESKIEGL 86
             +     Q     G ++  +      I     +  + + +              ++  L
Sbjct: 46  WLKPRIVSQVEAATGLQLDYQ---TARIAVLSGLRLEGLVVRTPSPFQGVAPDLLRVGSL 102

Query: 87  SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG 146
            ++  F  LLS   RV  +      L       G++++             +   +    
Sbjct: 103 EVQWSFGALLSKSPRVERVTARDVALALVADEAGLTSFSGLMGPAAPEPPPVKPPLGASQ 162

Query: 147 GRIKI-----------IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195
                           I   S     +    +        +   +             T 
Sbjct: 163 QVAAFLASAPPFGKAEISGVSLSFTRVRSGEVLERWSLGGLAVTVEAKHQDDGWKLLATT 222

Query: 196 NFDNKRSAFKI-----TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250
                    ++            +  +    +    A    +DL         +  +   
Sbjct: 223 GQTGAPLPVELVREGSAHPPAQASLELIFSAEAGASAARTRVDLDIA------RQTFDPQ 276

Query: 251 FSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
           F+V        +     +K  ++     +   
Sbjct: 277 FTVRSLLHGTASARFDGEKRHITIELDRTQLT 308


>gi|70728896|ref|YP_258645.1| hypothetical protein PFL_1518 [Pseudomonas fluorescens Pf-5]
 gi|68343195|gb|AAY90801.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
          Length = 358

 Score = 50.7 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/346 (10%), Positives = 89/346 (25%), Gaps = 27/346 (7%)

Query: 21  FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF- 79
             +P  +     R+    +   +   +  +   I + +    +     + I +       
Sbjct: 24  IALPYLV-----RDYLNDKLADMGDYRGRIS-DIDLALWRG-AYRINGLEIVKVSGKVPV 76

Query: 80  -ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH--- 135
              K   + +   +  L      V  +   QP LNF     G ++    ++         
Sbjct: 77  PFVKAPLIDLSVSWHSLWYDHAVVAKVQFIQPELNFV---DGGADKQASQTGEGTDWRAQ 133

Query: 136 -----NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                 + L+++ +  G+I   +  S     +    +  S   L  +             
Sbjct: 134 LGKLLPITLDELRIDDGKIHFHNFSSKPPVNIGATQVNASFYNLTNVVDTQGKRDA---R 190

Query: 191 AEGTGNFDNK-RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPI 246
            +G      +       T +  +  +    +++   +      D     G   +N     
Sbjct: 191 FDGKALLQGQAPMESTATFDPLSNFENFEFRLRARDIELKRFNDFASAYGKFDFNAGHGD 250

Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
                             L       +    + + N  I R   ++++  S T   N+ K
Sbjct: 251 VVIEAQAEKGQLHGYIKPLLRDVEVFNWQQDVENRNKSIFRSVWEALVGASETLLKNQRK 310

Query: 307 VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
                   L+ S +  +                +  N   ++    
Sbjct: 311 NQFATRVELSGSVHQQDISAFQAFLQILRNGFIQALNARYEQPKPS 356


>gi|307544505|ref|YP_003896984.1| hypothetical protein HELO_1915 [Halomonas elongata DSM 2581]
 gi|307216529|emb|CBV41799.1| hypothetical protein HELO_1915 [Halomonas elongata DSM 2581]
          Length = 1292

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/252 (10%), Positives = 64/252 (25%), Gaps = 10/252 (3%)

Query: 30  TDFREDFERQATLIVGKKIAVK---GGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGL 86
                  E         ++++    GG+   + P+  +   D    +        ++E  
Sbjct: 37  DRLSPQLESMLASRFSAEVSLNEARGGVD-GLDPWFEIADLDFHSRKGLGNVPLLEVEQA 95

Query: 87  SMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVK 145
            +R +    L  G   +    ++   L+ Y        W         +       +   
Sbjct: 96  KLRLDTAASLRRGMPVLERSRLEGVTLHLYQDEDLSWQWPAPADVPPELMPPGGFDLSRL 155

Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK 205
              I ++ ++      +  +        +     L + S  G    EG      +  +  
Sbjct: 156 DFWIGVLLRQRAWADDMRVVLHGRKRVAVLHAPRLLMTSDNGRAHLEGEVRLQGQPGSAF 215

Query: 206 ITANFPAKNKAISLKIQLFPL-AYPIIIDLFGNLFWNE----KQPIYSGVFSVAGDFSKL 260
                  ++        L        +I L   L +++                    +L
Sbjct: 216 QAVMELRRDTGNGFDADLQADMQLESLIGLSALLGFDDILRFDDASGEARLWGNWQDGRL 275

Query: 261 LNLELSAKKSRL 272
            ++ L     RL
Sbjct: 276 ADVRLDVTSPRL 287


>gi|332298217|ref|YP_004440139.1| protein of unknown function DUF490 [Treponema brennaborense DSM
           12168]
 gi|332181320|gb|AEE17008.1| protein of unknown function DUF490 [Treponema brennaborense DSM
           12168]
          Length = 1489

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 87/297 (29%), Gaps = 31/297 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW---------TDFREDFERQATLIVGKKIAVKG 52
           ++  ++ +     + +   FT  + +           TD+R    R      G +++   
Sbjct: 1   MKSQIVKISISSVLFIALLFTALILVRPLCVAFERQLTDYRTTALRLLEEKTGLRLSYA- 59

Query: 53  GIKIHILPFP--SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID-- 108
                I P    +   K +     E G    +I+   +  +   LL G        +   
Sbjct: 60  ----SISPSILSAFKIKGVAFYDAETGVPVLEIDRAVLSYKIGALLRGRFDTAFTKLTVN 115

Query: 109 ------QPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
                    +N+ +  K ++    R  T      V+    ++    I    +  +     
Sbjct: 116 GIALEYDAMINYRIIEKLLALVSSRTETETQQSPVVSGAFNL---SIPFDIEVKNISLHY 172

Query: 163 SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN-FDNKRSAFKITANFPAKNKAISLKI 221
           SD ++     F +            SV      +   +     K+ A   +    +S   
Sbjct: 173 SDASVDARVVFKSADIKSMQQGSLLSVSVNAKASAVLSAALLAKLPAKVASALGPVSASF 232

Query: 222 QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278
           Q      P   DL G+    +   + SG +S+A         + S K + +      
Sbjct: 233 QFDAAVTP---DLDGSSAKIKVLSLNSGSYSLARTGLFAEYKDGSVKLASMQNALPF 286


>gi|262172488|ref|ZP_06040166.1| possible exported protein [Vibrio mimicus MB-451]
 gi|261893564|gb|EEY39550.1| possible exported protein [Vibrio mimicus MB-451]
          Length = 1280

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/340 (10%), Positives = 99/340 (29%), Gaps = 23/340 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
            +L+ L  + ++ + G   +   +    F+ + +         ++A+           PS
Sbjct: 2   WLLVSLLIVLALAVTGLRILLPQM--NRFQAEIQHWLNQNSSVQVAIADVKGYWRNTHPS 59

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN--------F 114
           +  + ++    +    +     + +  + L  L   +  + D+ I+   L+         
Sbjct: 60  LSLQALQAHWPDSNDIQLNAASIEIEFDLLQSLWERQPVIADLTINGMVLDLRAIDWLAL 119

Query: 115 YLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172
             +     +   R    +D +    L+   +K   I       D +   +  L  Q S +
Sbjct: 120 EQNPNPRQSRQGRVVQQLDDLLLRQLDDFTLKNSAILYRTFVGDMRQLDIEKLRWQNSGQ 179

Query: 173 FLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
                  +SI          S      G+  +    F ++A+       ++  ++     
Sbjct: 180 RHFTEGVVSIAGTNINSLLVSANFMDHGSLRDVSGDFYVSADKVRVLPWLTRYLKDQTGI 239

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285
               +           QP   G   +        N E + +    SG    K +    ++
Sbjct: 240 QKGQLSFNAWATLEHNQP-IDGYVELKPSELVWQNGEQNHELLLESGIVELKPTKQGWQV 298

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
           + + L+ +  +          +     N    + +     
Sbjct: 299 NAHSLR-LRSDDVLWPLLDVAMDWQP-NEWRLNLSQLNID 336


>gi|220917007|ref|YP_002492311.1| AsmA [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219954861|gb|ACL65245.1| AsmA [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 879

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/269 (10%), Positives = 72/269 (26%), Gaps = 31/269 (11%)

Query: 38  RQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS 97
            + +  +G+ +AV+      +               + +    + +E   +    +  L 
Sbjct: 44  DRLSQQLGRPVAVESVKTRLLGGVGVRVAGVSVGAGEGEDRPLATLERAEVEVNLIGALL 103

Query: 98  ---GEIRVFDMYIDQPHLNFYLSSKGVSNWF-------------------QRKSTMDMIH 135
                + V +  +D   +N      G +N                       +     + 
Sbjct: 104 SGGKRVTVREAVVDGLRVNVIRFPDGTTNVERVAKRLEETSAKEPAAEAPAGEQKPADLS 163

Query: 136 NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195
            V +++  V+  RI  +D+       L   +L +  R L    PL +      +      
Sbjct: 164 AVRVDRAAVENARIAFLDRSVKGAEELYVDDLDVEVRDLRAGRPLEVVLKAAVLAKVQNL 223

Query: 196 NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255
               K +    T     +   + ++        P    + G   +   +        +  
Sbjct: 224 ELRVKAAPLPPTLVPTPEQVTLKVQPIDLGPLAPF---VPGEAGFRGGRFQADLAVVLGA 280

Query: 256 DFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                  +   + ++ + G F+       
Sbjct: 281 A------VPGGSGRTTVKGGFRADQLAFA 303


>gi|262164136|ref|ZP_06031875.1| possible exported protein [Vibrio mimicus VM223]
 gi|262027664|gb|EEY46330.1| possible exported protein [Vibrio mimicus VM223]
          Length = 1280

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/340 (10%), Positives = 99/340 (29%), Gaps = 23/340 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
            +L+ L  + ++ + G   +   +    F+ + +         ++A+           PS
Sbjct: 2   WLLVSLLIVLALAVTGLRILLPQM--NRFQAEIQHWLNQNSSVQVAIADVKGYWRNTHPS 59

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN--------F 114
           +  + ++    +    +     + +  + L  L   +  + D+ I+   L+         
Sbjct: 60  LSLQALQAHWPDSNDIQLNAASIEIEFDLLQSLWERQPVIADLTINGMVLDLRAIDWLAL 119

Query: 115 YLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172
             +     +   R    +D +    L+   +K   I       D +   +  L  Q S +
Sbjct: 120 EQNPNPRQSRQGRVVQQLDDLLLRQLDDFTLKNSAILYRTFVGDMRQLDIEKLRWQNSGQ 179

Query: 173 FLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
                  +SI          S      G+  +    F ++A+       ++  ++     
Sbjct: 180 RHFTEGVVSIAGTNINSLLVSANFMDHGSLRDVSGDFYVSADKVRVLPWLTRYLKDQTGI 239

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285
               +           QP   G   +        N E + +    SG    K +    ++
Sbjct: 240 QKGQLSFNAWATLEHNQP-IDGYVELKPSELVWQNGEQNHELLLESGIVELKPTKQGWQV 298

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
           + + L+ +  +          +     N    + +     
Sbjct: 299 NAHSLR-LRSDDVLWPLLDVAMDWQP-NEWRLNLSQLNID 336


>gi|118602273|ref|YP_903488.1| membrane protein-like [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567212|gb|ABL02017.1| membrane protein-like protein [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 821

 Score = 50.3 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/318 (12%), Positives = 91/318 (28%), Gaps = 27/318 (8%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-P 62
            V +   F+F +V++     P+       +   E Q + + G  + +   I         
Sbjct: 18  WVSVIFTFIFVLVVLFFVIFPML-----LKVPIETQLSSLTGLDVQLS-KITFDFEKKGI 71

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS---K 119
           ++   DI I   E     + I+ LS     L L         ++ID   L   L      
Sbjct: 72  TLKVHDISIASGEAQQ-MAMIKNLSWHINLLSLFDDIYHSSQIFIDTLVLYSNLDDFSID 130

Query: 120 GVSNWFQRKSTMD--MIHNVILEKIHVKG----GRIKIIDQESDQVYFLSDLNLQISARF 173
            + N        +     ++ + K  +K       + +       +  + + ++      
Sbjct: 131 DIRNIASLGMLKELYFFESLHINKTIIKDTVEIASLTLKRDGMQLLLTIPNQSIGTKHLD 190

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA-------KNKAISLKIQLFPL 226
           + II   +  +  G +    T + D+      +                   + +     
Sbjct: 191 ITIILSSAKINQNGFLTLPITLSGDDFELLSSLKIYSYQGYDFIQFSGLIQRMNVINISD 250

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
             P+++    N  W +     SG         K         K +   +   ++      
Sbjct: 251 YLPMVLIGDINHQWIKHAFQ-SGELDNINISIKKNLSTQLPAKIKFDAHLSNTELLFNTD 309

Query: 287 RYKLQSILPNSSTDEDNK 304
              L+    +++   D +
Sbjct: 310 WQSLK--QLDANIAIDGR 325


>gi|227494710|ref|ZP_03925026.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
 gi|226831790|gb|EEH64173.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
          Length = 77

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 58  ILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
            +P+P V  +DI +    D        +  +      L LL+  + +  + +++P     
Sbjct: 1   WVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEKPDARLI 60

Query: 116 LSSKGVSNWFQRKSTMD 132
             S+  +NW    +  D
Sbjct: 61  RLSEKNNNWTFNLANDD 77


>gi|84515553|ref|ZP_01002915.1| hypothetical protein SKA53_02806 [Loktanella vestfoldensis SKA53]
 gi|84510836|gb|EAQ07291.1| hypothetical protein SKA53_02806 [Loktanella vestfoldensis SKA53]
          Length = 1110

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/374 (11%), Positives = 94/374 (25%), Gaps = 45/374 (12%)

Query: 2   LRRVLIGLGFLFSV----VLVGAFTVPLFID-----WTDFREDFERQATLIV-GKKIAVK 51
           L RV + L  +  V    ++       + ID      +      + + T ++ G ++   
Sbjct: 30  LSRVRLVLRGVLLVCLMPLVFALVAGVMIIDREITAPSWITAQVQDRGTEVLDGGRLRFA 89

Query: 52  GGIKIHILPF--PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLP-LLSGEIRVFDMYID 108
             I + I     P++   D ++  +      ++I  +         +L   + V  + I 
Sbjct: 90  -AISVRIGRDLHPTIRLIDTQLIDRNGAL-VTRIPVVEADLSPRGVILQRAVLVQQVRII 147

Query: 109 QPHLNFYLSSKGVSNWFQRKSTMDMIHNV-----------------ILEKIHVKGGRIKI 151
              +N   +  G               ++                  L    V G  +  
Sbjct: 148 GAQINLRRARDGSLGLALGAGNQLRTRSLPEWLDEIDLFLDRPVFDALRTAQVSGLIVNY 207

Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI-----AEGTGNFDNKRSAFKI 206
            D  + + + +    + +  R   +     +  + G               D++ +   +
Sbjct: 208 DDARARRNWTVDGGQVDLDMRGGQLTVQAELALLSGRADVTTALLSYASPRDSRAADLAV 267

Query: 207 TANFPAKNKAISLKIQLFPL---AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL 263
           T N  A +   +    L  L   A P+   L   L              +     +    
Sbjct: 268 TINNIAASDIAAQSPALNWLRDVAAPLSATLRTTLDETGALGALRASLDIGAGVLQPTPA 327

Query: 264 ELSAKKSRLSGNFKISD--GNVRISRYKLQSILPNSSTDEDNKTKV-SQDEENLLNFSEN 320
                 S              +R S   +Q      S        +    +         
Sbjct: 328 SDPVGFSAARAELTYDPTLDLIRFSDIAVQ--SEWGSLQASGDAYLRDFADGLPRALLAQ 385

Query: 321 GAESMHDLNETDFF 334
                  LN    F
Sbjct: 386 FQLRDVALNPPGLF 399


>gi|238751398|ref|ZP_04612891.1| hypothetical protein yrohd0001_15850 [Yersinia rohdei ATCC 43380]
 gi|238710456|gb|EEQ02681.1| hypothetical protein yrohd0001_15850 [Yersinia rohdei ATCC 43380]
          Length = 1267

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/319 (13%), Positives = 99/319 (31%), Gaps = 37/319 (11%)

Query: 14  SVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRID 72
           ++++ G   +   I   D+R     +   + G  + V G ++     F P++  +DI   
Sbjct: 2   ALLVSGLRMMLPLI--NDYRPQIVAKVQSLSGIPLEV-GFMQGTWETFGPTLELRDIGAQ 58

Query: 73  QKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNF--YLSSKGVSNWFQRKS 129
             +      +++ +++  +    LL    +  DM   Q  L+    L+ +  S+     S
Sbjct: 59  LPQAD---LQVQRVTLALDVWQSLLHWRWQFRDMTFYQLQLDLNTTLARQPGSDSSLETS 115

Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSIDSIKGS 188
            +  I    L+   ++  RI  +     +    +  L    S         +S+ +I G 
Sbjct: 116 QITDIFLRQLDHFDLRNSRISFLTPSGPRAELEIPQLTWLNSLSRHRAEGQISLSTINGQ 175

Query: 189 V-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID--LFGNLFWNEKQP 245
             +     +  + +                 + +Q   +     I   L  N   +  + 
Sbjct: 176 HGVVMVRMDLHDNQGILNYGT----------VYMQADNIDVKPWISRWLHNNTGLDSAEF 225

Query: 246 IYSGVFSVAGDFSKLLNLELSAK-KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
                 S+ G      N+ LS    +   G+       + +  + L+     +    D  
Sbjct: 226 SLEAWLSIKGGEVYSGNMLLSQGQANWTVGD---QPHQLAVDNFVLEGHRQGTGWQID-- 280

Query: 305 TKVSQDEENLLNFSENGAE 323
                     L    +G  
Sbjct: 281 -------APELRLKTDGQS 292


>gi|59710984|ref|YP_203760.1| membrane protein, transporter [Vibrio fischeri ES114]
 gi|59479085|gb|AAW84872.1| conserved membrane protein, predicted transporter [Vibrio fischeri
           ES114]
          Length = 1277

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/242 (11%), Positives = 73/242 (30%), Gaps = 21/242 (8%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKI 83
                  ++ + E   +   G  I++ G +K       PS+  + +       G     +
Sbjct: 21  FLPTLNQYQPEIETFLSETTGFSISI-GEVKGRWRNTNPSLNLRKLTAVDPSTGDEIISV 79

Query: 84  EGLSMRAE-FLPLLSGEIRVFDMYIDQPHLNF------------YLSSKGVSNWFQRKST 130
             + ++      L +   +  D+ ID+   +               +     +       
Sbjct: 80  GAVEIQLNILSSLWAQRPQFADLRIDKLTADLTSLGPSSLGKSEEDAKAEQESDESLAKR 139

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSIDSIKGS- 188
           ++ +  V L    +K  ++  +  +  +    +  L  +   R       +S+   + + 
Sbjct: 140 LEDLFLVRLNHFSIKSSQVAFMALDGKEKTIQIDSLQWRNERRKHLAEGIVSVIGSEINQ 199

Query: 189 ----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
                  +  G+F +    F + A        I+  IQ         + +     + + Q
Sbjct: 200 LKVIANFKEKGSFKSLDGHFYVEAKNIQVTPWITESIQKEYGITQGEVSVNAWFSFKDGQ 259

Query: 245 PI 246
           PI
Sbjct: 260 PI 261


>gi|116623055|ref|YP_825211.1| hypothetical protein Acid_3959 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226217|gb|ABJ84926.1| conserved hypothetical protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 525

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 83/306 (27%), Gaps = 41/306 (13%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQA----TLIVGKKIAVKG------ 52
           ++ L G+G    V L+G     + ++   F+    +QA           + + G      
Sbjct: 5   KKWLAGIGLAAGVALIGLTIAGIVLNR-RFQPYLRQQAILYLRERFHSDVELSGLHVSLP 63

Query: 53  ---GIKIHI----LPFPSVFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVF 103
               ++  +         V    + +    + D      I   S   +   L      V 
Sbjct: 64  RLSPLRWALTRGRGTQLWVDGYGLVLRHKGRADLPPMFAIRKFSFAVDPGSLFEKTKVVP 123

Query: 104 DMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH---NVILEKIHVKGGRIKI---IDQESD 157
            + ++   LN               S+         V+L+++ ++     +      +  
Sbjct: 124 VVEVEGLELNLP-PKDERPALSANPSSAAEEEGKTGVLLQEVRIRDAEFVMLPRDRAKKP 182

Query: 158 QVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI 217
             + +  LNL  +   + +     + +       +  G F          ++ P  +  +
Sbjct: 183 LRFAIHQLNLHSAGTGVPMKYDARLTNPTPPGEIQSKGIFGP------WNSDEPG-DTPL 235

Query: 218 SLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV----AGDFSKLLNLELSAKKSRLS 273
           S   +       +     G          + G                 L+ S  +  L 
Sbjct: 236 SGDYRFDHADLGV---FHGVAGILSSTGRFEGELDTITARGEATVPDFRLKRSGNRVPLK 292

Query: 274 GNFKIS 279
             F++ 
Sbjct: 293 AQFEVQ 298


>gi|46579826|ref|YP_010634.1| AsmA family protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|46449241|gb|AAS95893.1| AsmA family protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|311234167|gb|ADP87021.1| hypothetical protein Deval_1870 [Desulfovibrio vulgaris RCH1]
          Length = 1194

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 35/95 (36%), Gaps = 3/95 (3%)

Query: 24  PLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE---DGSFE 80
           P  +      E+         G  +  +GG+   +LP P+V  +D+     E     + +
Sbjct: 26  PRLVSPERLAEEVRALVRERTGVVLDSRGGVTFSLLPQPAVILRDVTATVPESMFGNAAK 85

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
                +  R  +  LL G + +  + ++   + F 
Sbjct: 86  GHASVIVCRPSWRSLLEGRLLLAGLELEDAVIEFE 120


>gi|260885242|ref|ZP_05734615.2| conserved hypothetical protein [Prevotella tannerae ATCC 51259]
 gi|260853111|gb|EEX72980.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259]
          Length = 1463

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/343 (10%), Positives = 93/343 (27%), Gaps = 23/343 (6%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M +     +G L S+ L+                   +Q +  +  ++ + G   + +  
Sbjct: 1   MGKIARWVVGGLLSLYLLLLIIFNFSPADRWVSRLVSQQLSDRLHTQVKIGG---VRLGL 57

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS-SK 119
           F  +   D+ +  +       + + +S + EF  L  G + +  + +    +N Y     
Sbjct: 58  FNRLILTDVYLADQRGKE-LLRADLMSAKIEFRSLFQGRVSLRTVSLLDAQVNLYKESPD 116

Query: 120 GVSNWFQ------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV--------YFLSDL 165
              N+         K       ++ +  + ++  +       + +           +SD+
Sbjct: 117 KAPNFQFLLDAFRSKDQSPSNLDLRINSLILRRCKASYHALYAPRSPEKLNLNHLVVSDI 176

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-- 223
           N  +S + L   S              G                   ++  + L      
Sbjct: 177 NANVSLKHLTPDSINIRVRELSLREQSGLDLRRLSLRLAANKTRADIQDFDLQLPGTNIG 236

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
           FP                    I +  F+       +  L          G F ++   +
Sbjct: 237 FPRLLAFYKPDDFFKTLYLAGRIDNAQFTTTDFGFLVPRLRGFTHTLTARGLFAVNAKEI 296

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
            +  + +     N       K  +S+    +++   N      
Sbjct: 297 VLENWYVHEEHNNLLLALSGK--LSRRNGRIVSADANIKTLNL 337


>gi|258405316|ref|YP_003198058.1| hypothetical protein Dret_1192 [Desulfohalobium retbaense DSM 5692]
 gi|257797543|gb|ACV68480.1| hypothetical protein Dret_1192 [Desulfohalobium retbaense DSM 5692]
          Length = 948

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/297 (10%), Positives = 82/297 (27%), Gaps = 30/297 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR+L  + FL  + L G    PL ++     +  E         ++ V+           
Sbjct: 14  RRLLAAMLFLLVLCLGGWLGAPLALEQLLLVQMREAGVEQP---RVQVE----------- 59

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV- 121
           ++    I +      +   +++   +      LL G      + I         +  G  
Sbjct: 60  ALHPGRIALSGLSGANLGLEVQRAILHFSIQGLLQG--SADKLEIHGLTWRLKWTKAGPD 117

Query: 122 -----SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
                 +          +  + ++ I V+   ++    +      L+  +++  +    +
Sbjct: 118 PGLPFRSPSSPGRPDSPLPLLPIKHIQVRSSYLQWQYADFAWPQPLAG-DIRTQSEQGLL 176

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
              L    +   +  EG  +      + +       K         L   A  +   L  
Sbjct: 177 EFKLRSRLLGIPLRLEGEADLQQAILSAQARIPESGKPA-----APLETQAPALQAGLNA 231

Query: 237 NLFWNE-KQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
               +       +   ++     +  + ++S  K  L    ++    +      L  
Sbjct: 232 TWQQDLHGSGQGTLQAALQTANLRWPDYDVSLNKLVLDLRAEMDTD-LHFEALDLDL 287


>gi|270263283|ref|ZP_06191553.1| conserved membrane protein, putative transporter [Serratia
           odorifera 4Rx13]
 gi|270042971|gb|EFA16065.1| conserved membrane protein, putative transporter [Serratia
           odorifera 4Rx13]
          Length = 1270

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 79/301 (26%), Gaps = 36/301 (11%)

Query: 21  FTVPLFIDWTDFREDFERQATLIVGKKIAVKG-GIKIHILPFPSVFFKDIRIDQKEDGSF 79
             +P       +R     +   + G    V            P +  +++R    +    
Sbjct: 28  LALPEL---NKYRPQVLEKVASLSGVPFQVDFMQGSWETF-GPQLEMRNVRATLPKSN-- 81

Query: 80  ESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKG--VSNWFQRKSTMDMIHN 136
              IE +++  +    LL    +  D+   Q  L+   +  G            +  +  
Sbjct: 82  -LHIERVTLALDVWQSLLHWRWQFRDLTFYQFQLDMNTTLGGDDRKGNTIEPGKISDLML 140

Query: 137 VILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSIDSIKGS---VIAE 192
             L+   ++  RI  +     +  + +  L              LS+ ++ G    V   
Sbjct: 141 HQLDHFDLRDSRISFLMPSGARAEFEIPQLTWLNGRDRHRAEGQLSLSTLNGQHGVVQLR 200

Query: 193 GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID--LFGNLFWNEKQPIYSGV 250
                +                   ++ +Q   +         L  N          +  
Sbjct: 201 MDLRDNQGLLN------------TGTVYMQADNIDMKPWFTRWLRANTGLESADFSLAAW 248

Query: 251 FSVAGDFSKLLNLEL--SAKKSRL---SGNFKISDGNVRISR--YKLQSILPNSSTDEDN 303
             +        N+ L   A   R+        + +  + +SR     Q  +P  S   D 
Sbjct: 249 LQIKNGEIAGGNVLLKQGAANWRVGTEQHRLDVDNQALALSRQGNGWQVDVPQLSLQTDG 308

Query: 304 K 304
           K
Sbjct: 309 K 309


>gi|168048727|ref|XP_001776817.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671821|gb|EDQ58367.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 623

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/274 (12%), Positives = 74/274 (27%), Gaps = 13/274 (4%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           ++++V+   G L  +  + A   P         +     A+  +   ++V    +  +  
Sbjct: 128 LIKKVVKLAGVLLVLATIFAAAAPSMFSSPRGLKTIMSMASHTIPGTVSVA---RASLGW 184

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              ++ + + +   +       I  +  RA    ++SG+    D  +  P ++       
Sbjct: 185 RKPLYLEGVTLKGIDG-ETVLYIPKIETRASLWSIVSGKAGFGDSTVTAPVVDLQQDPAS 243

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF--LSDLNLQISARFLNIIS 178
              +     T           ++    R   I+   D      +   N  +      +I 
Sbjct: 244 GQPYLALALTPLAKLQENKPNLNNSKKRSVAIEPPRDVALAASVKAPNGGMEIVKGKVIL 303

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
           P    +  G  I           +         A      L I+    +     +  G L
Sbjct: 304 PQDAATAIGPSIF-LDVAAGRFATEADDALESAAHEYRGKLPIRGNIYSDRAQAEGLGFL 362

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
                     G   +       L+L     K  L
Sbjct: 363 SLP------QGQIHLLRPLKAELDLTPEFGKLYL 390


>gi|33240523|ref|NP_875465.1| hypothetical protein Pro1073 [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|33238051|gb|AAQ00118.1| Uncharacterized conserved protein [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 1309

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 91/301 (30%), Gaps = 10/301 (3%)

Query: 31  DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
             R D E + +   G+ + +     +             ++ Q  +      I  L ++ 
Sbjct: 22  KVRPDLENKLSDQWGRTLIIGPYKGLRPW---GFAVGPSKLLQGVEDDSSVDISSLKIQI 78

Query: 91  EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIK 150
             +  L     V      +  +    +  G   +   K+     +N  L  I +      
Sbjct: 79  APVASLLNWKPVVIFSPSKAKIFLKTNENGAH-FVLGKTKGGKANNFDLI-IRLDQSSGI 136

Query: 151 IIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF 210
           ++D   +++   ++  +++  + +     LS    KG +  +G G  +      K     
Sbjct: 137 LLDSSKEEIKTKANAFIKLVDKKIKGSVSLSFP-DKGELFLKGGGYLNTLSFRGKARFKN 195

Query: 211 PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270
                  S     +       ++    +   E+    +G     G   +  +L+ S    
Sbjct: 196 FNLESFQSTIFNRYNFLARGRVNANIRVGVKEEDINCAGGIRFDGLNLRFASLD-SRTLV 254

Query: 271 RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE 330
             S + +  +  + +   K +  L ++         + +     LN   +   S  D+N 
Sbjct: 255 SKSTSIRCRNKTIEMPNSKFKYGLWSADLRA--YMPIKKKAAYKLNL-LSSIHSESDINS 311

Query: 331 T 331
            
Sbjct: 312 P 312


>gi|237800286|ref|ZP_04588747.1| hypothetical protein POR16_15758 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331023143|gb|EGI03200.1| hypothetical protein POR16_15758 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 331

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/307 (9%), Positives = 84/307 (27%), Gaps = 22/307 (7%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMR 89
            R+    +   +   +  +   + + +    +   K ++I + +            + + 
Sbjct: 5   VRDYLNDKLADMGDYRGQIS-DVDLALWRG-AYRIKGLKIVKTDGKVPVPFVDAPMIELA 62

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH--------NVILEK 141
             +  L +    V       P +NF     G +N    ++               + L +
Sbjct: 63  VSWNSLWNDHAVVAKALFTDPQINFV---DGGNNKQASQTGQGTDWRTQLDKLLPITLNE 119

Query: 142 IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKR 201
           + +  GRI   +  S     +    +  S   L  +  +  +        +G        
Sbjct: 120 LRINNGRITFNNFNSTPKVKIDADQVNASFYNLTNVVDVEGNRDA---EFKGKARLLGHA 176

Query: 202 -SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDF 257
                   +  +  +    +++   +    + D     G   +N                
Sbjct: 177 DLESTARFDPFSNFEDFDFRLRATGIQLKKLNDFSSAYGKFDFNAGDGDIVIEAQADKGQ 236

Query: 258 SKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317
                  L       + +  + + +  I R   ++++  S T   N+ +        L+ 
Sbjct: 237 LTGYIKPLLRNVDVFNWHQDVENKDKGIFRSVWEALVGTSETVLKNQRENQFATRVDLSG 296

Query: 318 SENGAES 324
           S +  + 
Sbjct: 297 SVHQQDI 303


>gi|317969682|ref|ZP_07971072.1| hypothetical protein SCB02_09105 [Synechococcus sp. CB0205]
          Length = 1469

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/291 (9%), Positives = 72/291 (24%), Gaps = 9/291 (3%)

Query: 33  REDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92
           +   E  A+  +G  + +     +       +     R     D     + + +S+  + 
Sbjct: 57  KPWLEFLASRSMGHPLELGPYRGLRP---LGLAAGASRFKPGLDNPSTIEAQAVSVSLDP 113

Query: 93  LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILE-KIHVKGGRIKI 151
           L  L     V    ID+  ++   +S+G      R         + L   +     +++I
Sbjct: 114 LRSLLTRSWVLQFQIDRARVDLRRNSQGSFWQLGRVPAGGEPPPLTLRYGLSGGPAQVRI 173

Query: 152 IDQESDQVYFLSDLNLQISARFLNIISPLSIDSI-KGSVIAEGTGNFDNKRSAFKITANF 210
              +          +L +  R   + +   + S   G +  E   ++  +R   ++    
Sbjct: 174 HGAKGAPTSLALKGSLSVDLRRRRLDTNTQLRSREAGQLRVEVRNDWQRQRLQLQLQPQA 233

Query: 211 PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270
                 +              ++    L          G   +                +
Sbjct: 234 LKLASLLPFLPGEVKADVRGALNGRLRLERTASTNRCQGQLDLTDLRWTPGGAMEPLTSA 293

Query: 271 RLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321
           RL          +  S  +              +  +     N L      
Sbjct: 294 RLDLRCSPQGLRLASSPLRWSGWRG----QLQGEFPLVGAWSNQLQLQLQA 340


>gi|312890431|ref|ZP_07749968.1| glycosyl transferase family 51 [Mucilaginibacter paludis DSM 18603]
 gi|311297201|gb|EFQ74333.1| glycosyl transferase family 51 [Mucilaginibacter paludis DSM 18603]
          Length = 717

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/343 (13%), Positives = 94/343 (27%), Gaps = 22/343 (6%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93
                +A       + +      H     +V F  I +   E+      I    +  +  
Sbjct: 43  SKATAKAKRDYNLDVKIG---SAHFSGLSTVSFSGITVV-PENRDSLVSISNFEVSVKLW 98

Query: 94  PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIID 153
           PLL G +++  + +D   LN   + KGV N+           +              I  
Sbjct: 99  PLLFGNMKLASVKLDNGVLNLS-NVKGVKNFDFLFKKKKDTTDTHSGGDISVVANNLINQ 157

Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSID-SIKGSVIAEGTGNFDNKRSAFKITANFPA 212
                   L   N  I     +I   L    ++  +         +N  S    T     
Sbjct: 158 VLYKIPDELDIKNFTIKFHDDSINVKLLTQYALIKNSNLSSAIIVNNGESTLHFTGKMRP 217

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
            +K I +K                 +     Q  +    S     ++L  +E S  ++R+
Sbjct: 218 SDKYIDVKFYADNKK----------VELPFIQKKFGMKLSFDTISTELKKVERSDGETRI 267

Query: 273 SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS-QDEENLLNFSENGAESMHDLNET 331
            G + + +  +   +        N           +    EN ++   + A  + D+   
Sbjct: 268 YGYWAVKNLLINHPKI-----ASNDIIIPSGSIDANIFIGENYVSIDSSSAIHIKDVTAN 322

Query: 332 DFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374
            + +   K  K  ++K         K          +  E   
Sbjct: 323 PYIKYTLKPVKVYEVKLHTDFIDAQKIFSSFPIGTFDALEGIQ 365


>gi|114569857|ref|YP_756537.1| hypothetical protein Mmar10_1307 [Maricaulis maris MCS10]
 gi|114340319|gb|ABI65599.1| hypothetical protein Mmar10_1307 [Maricaulis maris MCS10]
          Length = 1162

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/303 (9%), Positives = 77/303 (25%), Gaps = 50/303 (16%)

Query: 1   MLRRVLIGLGF---------LFSVVLVGAFTVPLF----IDWTDFREDFERQATLIVGKK 47
           MLR+                L   +    F +       ++    RED +         +
Sbjct: 1   MLRKSAKWTLIYLLEAVAALLALTIFAIGFVLWRLSSGPVELEFLREDAQAMLATAFEGE 60

Query: 48  IAVKGGIKIHILPFPS---VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFD 104
           +   G ++    P      +   D+ + +       ++   +        L+ G I   +
Sbjct: 61  VVALGSLQARFEPSTRAIVLVATDVTVAEASG-EVVTRAPRIEAGLAADALIFGRIEPVE 119

Query: 105 MYIDQPHLNFYLSSKGVSN--------------------------WFQRKSTMDMIHNVI 138
           + ID   ++    + G                             +    S+        
Sbjct: 120 LTIDGGSVSIVRRADGAVGAGLGGVDRISSTARLPERGGDDSVSLFEILASSGAPAQLDR 179

Query: 139 LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS------IDSIKGSVIAE 192
           L  + +    ++++D  +   +F+    + +      I++ +              +   
Sbjct: 180 LRHVRISNAAVRVVDDVAGLAWFIDSAGVSLDRDDARILAEVEGRLATPSGFAPVDLRLR 239

Query: 193 GTGNFDNKRSAFKITANFPAKNKAISLKI-QLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
                ++       +   PA     +     L  L  PI +D   +          S   
Sbjct: 240 AGTGLESLLLEMSFSDLSPAGILPDTGPASALRALDAPIALDFVVDATRENGIRTASLQL 299

Query: 252 SVA 254
            + 
Sbjct: 300 DIG 302


>gi|332994876|gb|AEF04931.1| putative protease [Alteromonas sp. SN2]
          Length = 1331

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/320 (11%), Positives = 88/320 (27%), Gaps = 17/320 (5%)

Query: 1   MLRRVLIGLGFLFSVVL----VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           +++++ + L  L  +         + +P        +   E   +   G  + +     +
Sbjct: 11  LVKKIWLLLAILLVLFALLISAARYALPHI---EHNKHLLEDYISQRYGVNLTINSVHAV 67

Query: 57  HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFY 115
                PS+    + + Q +       I  + +  +F   L  + I      +    L+  
Sbjct: 68  WQRSGPSIVLNSVSMAQSDASPVGLNIRQVYVELDFWQSLRRQMISSTRFELRGLKLDVD 127

Query: 116 LS--SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
                +   N F     +  +    L+   ++ G + +      Q + +  L    S + 
Sbjct: 128 ADRFERAGDNNFPVVDALKSLFLEQLQSFSLEEGEVLLSKNGETQSFIIDQLTWNNSGKR 187

Query: 174 LNIISPLS---IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
              +  +    + S   S I + TGN D     F   A     +  +S  I+        
Sbjct: 188 HQGLGQMKVADVSSNSASFIIDVTGNKDAFEGVFYARAEDLDISPWVSDLIKTKRPLTES 247

Query: 231 IIDLFGNLFWN-EKQPIYSGVFS---VAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
                                F    +     +   L    +   +         +VR+ 
Sbjct: 248 RASFEIWADVQSNGITGVQAQFEESLLEWGGEEYSTLVTGIRGGSIEAAPTQDGWSVRVD 307

Query: 287 RYKLQSILPNSSTDEDNKTK 306
           +  + S       D   K  
Sbjct: 308 QLVIDSGNETIEADFVGKVT 327


>gi|197335662|ref|YP_002155134.1| hypothetical protein VFMJ11_0368 [Vibrio fischeri MJ11]
 gi|197317152|gb|ACH66599.1| conserved hypothetical protein [Vibrio fischeri MJ11]
          Length = 1289

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/306 (9%), Positives = 89/306 (29%), Gaps = 27/306 (8%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKI 83
                  ++ + E   +   G  I++ G +K       PS+  + +       G+    +
Sbjct: 33  FLPTLNQYQPEIETFLSETTGFSISI-GEVKGRWRNTNPSLNLRKLTAVDPSTGNEIISV 91

Query: 84  EGLSMRAE-FLPLLSGEIRVFDMYIDQPHLNFYLS------------SKGVSNWFQRKST 130
             + ++      L + + +  D+ ID+   +                     +       
Sbjct: 92  GAVEIQLNILSSLWAQQPQFADLRIDKLTADLTSLGPSSLGKNEEDIEAEKESDESLAKR 151

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDLNLQISARFLNIISPLSIDSIKGS- 188
           ++ +  V L    +K  ++  +  + ++    +  L  +   R       +S+   + + 
Sbjct: 152 LEDLFLVRLNHFSIKSSQVAFMALDGNEKTIQIDSLQWRNERRKHLAEGIVSVIGSEINQ 211

Query: 189 ----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
                  +  G+F +    F + A        I+  IQ         + +     +   Q
Sbjct: 212 LKVIANFKEKGSFKSLDGHFYVEAKNIQVTPWITDSIQKEYGITQGEVSVNAWFSFKNGQ 271

Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSG---NFKISDGNVRISRYKLQSILPNSST-D 300
           P    +   +  +   +  + S  +  + G     +  +    +    +Q     +   +
Sbjct: 272 P-IDALVEASPSYLNWVE-DKSIHQVSVEGGVFELQPDNEGWNVFATDVQVKHQGNKWPE 329

Query: 301 EDNKTK 306
                 
Sbjct: 330 ITGSFS 335


>gi|254883614|ref|ZP_05256324.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319642317|ref|ZP_07996975.1| hypothetical protein HMPREF9011_02575 [Bacteroides sp. 3_1_40A]
 gi|254836407|gb|EET16716.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317386040|gb|EFV66961.1| hypothetical protein HMPREF9011_02575 [Bacteroides sp. 3_1_40A]
          Length = 1549

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/337 (11%), Positives = 97/337 (28%), Gaps = 31/337 (9%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89
               +     A+   G  I+V G I +      ++   ++      +      +  L + 
Sbjct: 34  NFLVDKAAVYASEATGMNISV-GRISLSF--PLNLVVTNVDAASPHN-DTLLSVRRLQVN 89

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLN-------FYLSSKGVSNWFQRKSTMDMIHNVILEKI 142
            + LPLL  ++ V  + +    +N         L+      +             I+ K+
Sbjct: 90  VQLLPLLKKQVEVDGISLQGATVNSNDLIHGMKLNGTLGELFISSHGVALDPETAIVNKV 149

Query: 143 HVKGGRIKI-----------IDQESDQVYFLSDLNLQISARFLNIISP--LSIDSIKGSV 189
            +K   + +               +     L D++LQ  +  L++         S+  ++
Sbjct: 150 LLKDTDLSLCLNDTAAADTAASDTAYWKIILQDIDLQNVSFALDMPLDSLSLAASLDNAI 209

Query: 190 IAEGTGNFDNKRS---AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
           + +G  +          F+I       +    L                 ++        
Sbjct: 210 LRDGLIDLHKSAYSLQTFRIENGRVRYDNGKPLAADSLSSGLDPSHIALTDIGVKLDSLY 269

Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
           Y G    A     +L      +    +G    +D  +R+   KL+       +  +    
Sbjct: 270 YGGRNMKAIISQFVLKERSGVEIVSATGRMVSNDKVLRVPSLKLE----TRDSYLELNAA 325

Query: 307 VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343
           +  +  +  +     A  M D+ + D        ++ 
Sbjct: 326 MDWNALDFKDEGLVSARLMADIGKPDVVRFMGSMDEK 362


>gi|71281982|ref|YP_271251.1| hypothetical protein CPS_4604 [Colwellia psychrerythraea 34H]
 gi|71147722|gb|AAZ28195.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
          Length = 842

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/394 (12%), Positives = 108/394 (27%), Gaps = 41/394 (10%)

Query: 12  LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP-SVFFKDIR 70
           +   + +G F     I     +             ++ +     I   PF   +   DI 
Sbjct: 15  ILLALYLGIFLCIWLISSPVAKHFINPILAE---HQLQLSDDSSIRFNPFLMRITLSDID 71

Query: 71  IDQKEDGS--FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK--------- 119
           +   +         +E L+++     L   +I + +  + +  L                
Sbjct: 72  LSSTKSKQQYTVFSLEELTLQVALWQLAFDKIALSEFSLTRGTLKVIQHDDHLIIAGITI 131

Query: 120 -----GVSNWFQRKSTMDM--IHNVILEKIHVKGGRIKII---DQESDQVYFLSDLNL-- 167
                G      + +       + ++L    +    I+I     +  ++ + +    L  
Sbjct: 132 PPSTEGEELTKAQINEPATSLPYQLVLPDFLLSQFAIEIEIDSQKLQNKTHHIEIKQLAL 191

Query: 168 -QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
            QI A        L++ ++        T N         I +N    N  I         
Sbjct: 192 SQIKATETKQEGHLALTALVDETHLSLTANTQLVSGKGDIHSNLLINNYPIEKLAPYVEQ 251

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL---SGNFKISDGNV 283
              +   L                  V      L +L L   +      +     SD  V
Sbjct: 252 LTELKGSLSFTSQQTVTLAEQGINLKVQKASLTLQDLLLGLAEQNFTLQTLQHNFSDVAV 311

Query: 284 RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF---SENGAESMHDLNE------TDFF 334
            +   K+  +  NS+        +SQ+E           +  +    L++      TD  
Sbjct: 312 HLQDNKITHLAGNSNIKLT-DAILSQNESKATITAFKQLSLDDINFVLDDEPSIDITDIV 370

Query: 335 EEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKE 368
            ++   +K   L     Q ++++  +  +    +
Sbjct: 371 MDDLLFSKKAALADAVAQKAIDRINKLSDEDGLD 404


>gi|226226015|ref|YP_002760121.1| hypothetical protein GAU_0609 [Gemmatimonas aurantiaca T-27]
 gi|226089206|dbj|BAH37651.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 1520

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 54/165 (32%), Gaps = 13/165 (7%)

Query: 3   RRVLIGLG-FLFSVVLVGAFTVPLFIDWTDFREDFERQA----TLIVGKKIAVKGGIKIH 57
           R +++G    L ++++     +         R    R         +  ++ V G I   
Sbjct: 6   RTIVLGTATVLLTLLVAVIGGIVALTQTDRGRAIILRAVLPAARAAIPGRLYV-GKIGGT 64

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
           +    ++   D+R     DG+       + +  +   LL   + V  + +D+P +     
Sbjct: 65  LFTDITIDSIDLR---TPDGTPFLSTGRVRVTYDPRDLLDFRVIVRSLEVDRPQVTLVDY 121

Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL 162
                NW +         ++   ++    GR  ++D  +      
Sbjct: 122 GDDDWNWKRALRKRAPRPSMNPGRL----GRYIVVDTATLNELTF 162


>gi|150002972|ref|YP_001297716.1| hypothetical protein BVU_0375 [Bacteroides vulgatus ATCC 8482]
 gi|149931396|gb|ABR38094.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
          Length = 1549

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/337 (11%), Positives = 97/337 (28%), Gaps = 31/337 (9%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89
               +     A+   G  I+V G I +      ++   ++      +      +  L + 
Sbjct: 34  NFLVDKAAVYASEATGMNISV-GRISLSF--PLNLVVTNVDAASPHN-DTLLSVRRLQVN 89

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLN-------FYLSSKGVSNWFQRKSTMDMIHNVILEKI 142
            + LPLL  ++ V  + +    +N         L+      +             I+ K+
Sbjct: 90  VQLLPLLKKQVEVDGISLQGATVNSNDLIHGMKLNGTLGELFISSHGVALDPETAIVNKV 149

Query: 143 HVKGGRIKI-----------IDQESDQVYFLSDLNLQISARFLNIISP--LSIDSIKGSV 189
            +K   + +               +     L D++LQ  +  L++         S+  ++
Sbjct: 150 LLKDTDLSLCLNDTAAADTAASDTAYWKIILQDIDLQNVSFALDMPLDSLSLAASLDNAI 209

Query: 190 IAEGTGNFDNKRS---AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
           + +G  +          F+I       +    L                 ++        
Sbjct: 210 LRDGLIDLHKSAYSLQTFRIENGRVRYDNGKPLAADSLSSGLDPSHIALTDIGVKLDSLY 269

Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
           Y G    A     +L      +    +G    +D  +R+   KL+       +  +    
Sbjct: 270 YGGRNMKAIISQFVLKERSGVEIVSATGRMVSNDKVLRVPSLKLE----TRDSYLELNAA 325

Query: 307 VSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343
           +  +  +  +     A  M D+ + D        ++ 
Sbjct: 326 MDWNALDFKDEGLVSARLMADIGKPDVVRFMGSMDEK 362


>gi|315637109|ref|ZP_07892332.1| conserved hypothetical protein [Arcobacter butzleri JV22]
 gi|315478645|gb|EFU69355.1| conserved hypothetical protein [Arcobacter butzleri JV22]
          Length = 919

 Score = 48.7 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/376 (9%), Positives = 104/376 (27%), Gaps = 22/376 (5%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP-FP 62
           + L  L +    +L         +     +++  +     +  K +++    +   P   
Sbjct: 2   KALKILFYTLISLLAIYIISGFTLVPYLLKKELIKNLDENLTLKSSIE---DVKFNPITL 58

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSKGV 121
           +    D ++  + +       + L++       +     R+ ++  D+  LN      G 
Sbjct: 59  NAKVHDFKLVDENNNI-IVFFKELNISLSIFKSIEQKHFRIENITFDEIFLNIIQEKDGS 117

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            N        +      +E    +     I    S      +D+N   +         L 
Sbjct: 118 INLANILKPTENEEE-QIEDNTDEQTSNNIKFLVSKIDLKNADINFVSNIDKQPFSIYLK 176

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
             +     +     +  +    F+I      ++  + +        +     +  N    
Sbjct: 177 DINYTIYDLGTFKNSLSSNNLTFRIN-----EHTNVQISSAFKINPFKAYGKISINDLRI 231

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI--SDGNVRISRYKLQSILPNSST 299
           ++   +   F      +              +    +  +   + I+   L+        
Sbjct: 232 KEFIDFDKNFFNFELNNDANINLGLNYNIDTTNELALYLATDLLEINNINLKQNKKTM-- 289

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN-DDLKKDDIQYSVNKK 358
                  + + +    +F         +    D  +     +KN  +        + + +
Sbjct: 290 -----ASLKKLDIKRFDFDLISQNINFNGVFIDGLKANMILDKNGVNFASLVTTSTNSNE 344

Query: 359 EEKDNSHDKENQENFS 374
           ++++NS+ K    NFS
Sbjct: 345 KKEENSNSKPWILNFS 360


>gi|164605265|dbj|BAF98443.1| AsmA family protein [Sphingopyxis macrogoltabida]
          Length = 421

 Score = 48.7 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 49/193 (25%), Gaps = 24/193 (12%)

Query: 116 LSSKGVSNW-FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
             + G SNW   R    D      +  + +  GR  + D +           L I+    
Sbjct: 2   RDADGRSNWGGPRPGGSDSSPPPAIGTVRINEGRFTLKDAKRR---------LDIAGTIE 52

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
              +     + +G              +A    A   A++            +  + +  
Sbjct: 53  AKDAKGLAIAAEGQFN---------GAAAKLGAAASWAQDAKGRWPFSAELTSDLLRLSA 103

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK-----KSRLSGNFKISDGNVRISRYK 289
            G +         +   +  G   K L+  + A         L G  +    +  I R  
Sbjct: 104 SGTMAAPLDTAHMTMRMTAHGTSLKQLDYIIEAGLFGTQAIDLDGAVRRDGTDWFIDRLD 163

Query: 290 LQSILPNSSTDED 302
            +      +    
Sbjct: 164 GRIGRSTIAATAK 176


>gi|196230638|ref|ZP_03129500.1| hypothetical protein CfE428DRAFT_2665 [Chthoniobacter flavus
           Ellin428]
 gi|196225568|gb|EDY20076.1| hypothetical protein CfE428DRAFT_2665 [Chthoniobacter flavus
           Ellin428]
          Length = 464

 Score = 48.7 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/300 (10%), Positives = 73/300 (24%), Gaps = 27/300 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFT----VPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           LR +      L  +++VG F     V  ++    FR+   ++A   +     +   +   
Sbjct: 16  LRLLFWATPILLVLLIVGYFVGRAAVESYLHSDGFRQFIAKKAGDTLHADAEIA-PLS-- 72

Query: 58  ILPFPSVFFKDIRIDQKEDGSFE-SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
                ++F    +     D +F   +IE +              +V    + +  ++   
Sbjct: 73  -FAGSTIFSDGFQAKGGPDAAFSNLQIEQIRTEISLRRFFEKVWQVEQFDVQRVRVDLSG 131

Query: 117 SSKGVSNWFQRKSTMDM----------IHNVILEKIHVKGGRIKIIDQE-SDQVYFLSDL 165
                                       + V + K  V   ++   D      V+ +   
Sbjct: 132 PRIDRPLEPAPSPLSAPKTEHTSNGWFPNRVEIGKATVHDTQLTWKDGGLRGTVFEVEPH 191

Query: 166 NLQISARFLNIISP----LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI 221
           +                   +D     +       F +     + +         I    
Sbjct: 192 DGSWQLTGQGGRLTYGKLPPLDVNNLHLRYRAPSLFISSSELRQPSGGSLQATGEIDFTR 251

Query: 222 QLFPLAYPIIIDLFGNLFWN---EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI 278
           +       I I +   L  +     +   SG   V          ++S       G    
Sbjct: 252 EADLQLTLINIAITPYLSEDWRVRTKGNLSGEVKVKSPLPARGGPQISGTVKLTQGELTA 311


>gi|34541677|ref|NP_906156.1| hypothetical protein PG2096 [Porphyromonas gingivalis W83]
 gi|34397995|gb|AAQ67055.1| conserved domain protein [Porphyromonas gingivalis W83]
          Length = 1596

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 87/314 (27%), Gaps = 29/314 (9%)

Query: 3   RRVLIG---LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           +R+L        L  +++ G   +P    W        ++A+   G +I +    +I + 
Sbjct: 9   KRILFWVLISPLLLVLLVAGLLYLPPIQQW--AVGIATQKASEATGMQIGIG---RIRLG 63

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN------ 113
               +  +DI    K  G   + I  L +    LPLL  ++ V ++ +    ++      
Sbjct: 64  FPLHLSLQDIT-AVKVQGDTLADIGSLRVSVSVLPLLRRQVEVPELKLQDASIHYTDSLG 122

Query: 114 -FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
              L  K  S      +       V+L +  +    I     ++                
Sbjct: 123 LMDLRLKAKSIRAAHIAIDPEAKRVVLGRWQLFDTDIAYFSADTTAADTTQKEPFDWQFE 182

Query: 173 FLNIISPLSIDSIKGSVI------AEGTGNFDNKRSAFK---ITANFPAKNKAISLKIQL 223
              +        ++  +         G       +               ++ +      
Sbjct: 183 LDRLDLKNISAEVRMPLDSVLLKTFVGKAAIAKTKMDIADMLYQVGMAQLDRTVLSYDTD 242

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN----LELSAKKSRLSGNFKIS 279
              A P   D       +         F       +L+N         +  RLSG +++ 
Sbjct: 243 EGEASPTSFDYRHIALNDVSLQAKDICFHDGDMELQLVNGSLRERDRFELQRLSGRYRMD 302

Query: 280 DGNVRISRYKLQSI 293
                ++   L + 
Sbjct: 303 RFGFLLTDLSLATG 316


>gi|182678690|ref|YP_001832836.1| hypothetical protein Bind_1717 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182634573|gb|ACB95347.1| protein of unknown function DUF490 [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 1423

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 85/281 (30%), Gaps = 14/281 (4%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR+LI  G   + +   +  + L +     ++      +  +          KI I   
Sbjct: 1   MRRLLIRSGVAVAALAGVSSLILLSVQTRPGKDALASFLSRQL-----SSADQKIAIGRI 55

Query: 62  PSVFFKDIR---IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
                 D+R   I   +     ++I+  ++R     LL+  + +  +  D+  ++     
Sbjct: 56  EGFVPFDMRIDHITAADSQGIFAEIDNAALRWSPSALLALTVHIDALTADR--IHLARFP 113

Query: 119 KGVSNWF-QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
                    +  ++  +  + L+++ +    +  +         L   +  ++     + 
Sbjct: 114 ASQPTPASDKPFSLPSLPPLRLDRLAIAIIDLDAVVLGQAASLSLEG-SASLANAAQGLQ 172

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
             L    + G   A        +     + A+ PA     +L       A  + I   G 
Sbjct: 173 LQLDRKDVPGRFAANLHFVPGTEALDLDVNASEPAGGLIGTLLDLRDEPALALAIQGKGT 232

Query: 238 LFWNEKQPIYSGVF--SVAGDFSKLLNLELSAKKSRLSGNF 276
           L   +   + +      + G        E       L G+ 
Sbjct: 233 LKNWDSTLVLTADTVERLKGSAQLRGTAEGIRSTFTLDGDL 273


>gi|295687584|ref|YP_003591277.1| hypothetical protein Cseg_0133 [Caulobacter segnis ATCC 21756]
 gi|295429487|gb|ADG08659.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756]
          Length = 1077

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 87/305 (28%), Gaps = 28/305 (9%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVF 65
           L+ LG     + + AF     + W+  R +  R+      +   ++  ++I  L      
Sbjct: 22  LVDLGLEAVSLSMLAFIATGLVVWSG-RREISRELAESWLRDHGIQAAVEIDDLDATGFS 80

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE---IRVFDMYIDQPHLNFYLSSKGVS 122
              +R+  +++       + L +  +     +GE   I+   + + +P +   +  KG  
Sbjct: 81  -GRVRLGSRDN--PVFAADRLEVAYDLAAPWTGERFGIQTKAVRLVRPRILASVDDKGRL 137

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSI 182
            +   ++ +D            +   +            + D  L ++     +      
Sbjct: 138 RFGPLQALIDEALKAP------RNPNV------PGPAILVEDARLDLATPGGRVRLTGDA 185

Query: 183 DSIKGSVIAEGTGNFDNKRSAFKITA-NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
               G +        D + +  +  + +     K  ++  +       + + L  +    
Sbjct: 186 SLDDGQL-----LRLDGRLAPLRYASPDLALTAKGATVSARKRGDRLTVEVSLAID-SLE 239

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
                 +G  +         +L        L     +   N R      Q+    +    
Sbjct: 240 ANDADLAGAAATLSADLPYPDLAGMRASGPLEARLAVKAENGRFGE--GQARGLTADLSL 297

Query: 302 DNKTK 306
             +  
Sbjct: 298 AGRFD 302


>gi|294056198|ref|YP_003549856.1| protein of unknown function DUF748 [Coraliomargarita akajimensis
           DSM 45221]
 gi|293615531|gb|ADE55686.1| protein of unknown function DUF748 [Coraliomargarita akajimensis
           DSM 45221]
          Length = 1053

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/338 (10%), Positives = 90/338 (26%), Gaps = 41/338 (12%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH---IL 59
           + VL  + +   +     F V              R  +  V  +  +    ++    + 
Sbjct: 7   KTVLRIIAYAVGIYAAIGFLVV---------PPVVRYVSERV-LQAHLSPDARVRQVNMN 56

Query: 60  PF-PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS 117
           PF      + + I   E G+    +   ++    L  ++     +  + ++ P++  + +
Sbjct: 57  PFTFKARVQGVSIPD-EQGAVWMSLSSATVNVSLLQSVVRLHPVMDAIRVEDPYIAVHRT 115

Query: 118 SKGVSNWFQRKSTMDM---------IHNVILEKIHVKGGRIKIIDQESDQVY--FLSDLN 166
               S+                   I  V L K+ V+ GR    D  ++  Y   +  +N
Sbjct: 116 PTEPSDEQAELPDWRDVVTQLAVVEIPKVTLHKLTVQNGRAYYTDSTNEDFYEKEVGPVN 175

Query: 167 LQISARFLNIISPLSIDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAIS--- 218
             +            +  +  +     +   G    D +    +        +       
Sbjct: 176 FTLRDLTTARSKHNEMSFVASTPREERMEFRGELTMDPRTVQIEFELAGIQIHDLSPYYT 235

Query: 219 --LKIQLFPLAYPIIIDLFGNLFWNEKQPIY-SGVFSVAGDFSKLLNLELSAKKSRLSGN 275
             +   L    +    DL  NL   E      +G   +     +  + +           
Sbjct: 236 RFINFNLKEAVFGTSFDLVLNLSDVENVLELRNGQVLLTDMMLERRDADDRIVSLD---R 292

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313
             + + +      +       +S       +    + N
Sbjct: 293 LSVENMSFDFPSLEANIDRIEASGGGTLVARDKNGDIN 330


>gi|294775605|ref|ZP_06741114.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
 gi|294450547|gb|EFG19038.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
          Length = 1549

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 84/286 (29%), Gaps = 27/286 (9%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89
               +     A+   G  I+V G I +      ++   D+      +      +  L + 
Sbjct: 34  NFLVDKAAVYASEATGMNISV-GRISLSF--PLNLVVTDVDAASPHN-DTLLSVRRLQVN 89

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLN-------FYLSSKGVSNWFQRKSTMDMIHNVILEKI 142
            + LPLL  ++ V  + +    +N         L+      +             I+ K+
Sbjct: 90  VQLLPLLKKQVEVDGISLQGATVNSNDLIHGMKLNGTLGELFISSHGVALDPETAIVNKV 149

Query: 143 HVKGGRIKI-----------IDQESDQVYFLSDLNLQISARFLNIISP--LSIDSIKGSV 189
            +K   + +               +     L D++LQ  +  L++         S+  ++
Sbjct: 150 LLKDTDLSLCLNDTAAADTAASDTTYWKIILQDIDLQNVSFALDMPLDSLSLAASLDNAI 209

Query: 190 IAEGTGNFDNKRS---AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
           + +G  +          F+I       +    L                 ++        
Sbjct: 210 LRDGLIDLHKSAYSLQTFRIENGRVRYDNGKPLAADSLSSGLDPSHIALTDIGVKLDSLY 269

Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
           Y G    A     +L      +    +G    +D  +R+   KL++
Sbjct: 270 YGGRNMKAIISQFVLKERSGVEIVSATGRMVSNDKVLRVPSLKLET 315


>gi|71899461|ref|ZP_00681619.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
 gi|71730774|gb|EAO32847.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
          Length = 220

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/148 (12%), Positives = 47/148 (31%), Gaps = 9/148 (6%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHI-LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEF 92
           +      ++  G+ +     +        P +  + +RI        +  +  + +    
Sbjct: 56  QQVADWLSVRAGQPVRFD-TLSTSWTQRGPLLRLQGVRI----GPQGKVGVGQVEVLVAM 110

Query: 93  LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKI---HVKGGRI 149
              L     + ++ +    L  +  S G  + +     +      +L +     V GGR+
Sbjct: 111 YTGLLPGHSLIELRLRGMALTVHRDSAGRWSVYGLPRDVGGDPLEVLRRFGELQVIGGRL 170

Query: 150 KIIDQESDQVYFLSDLNLQISARFLNII 177
            +    S     LS +NL++      + 
Sbjct: 171 SVDAPSSGVSTTLSQINLRVRVAGDRLR 198


>gi|325917982|ref|ZP_08180149.1| hypothetical protein XVE_4170 [Xanthomonas vesicatoria ATCC 35937]
 gi|325535805|gb|EGD07634.1| hypothetical protein XVE_4170 [Xanthomonas vesicatoria ATCC 35937]
          Length = 1258

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/377 (11%), Positives = 104/377 (27%), Gaps = 55/377 (14%)

Query: 12  LFSVVLVGAFTVPLFIDWTDFREDFERQATLIV--GKKIAVKGGIKIHILPFPSVFFKDI 69
           +  +VL+    +   +     R+    Q    +  G              P   +  +++
Sbjct: 3   VLGLVLLALIAIYWLLQTVAGRDVLLAQVVARLPVGASFTYGSVEGPVAGP---LTLRNV 59

Query: 70  RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK--GVSNWFQR 127
                         E + +  +  PLL  ++++  + +    LN   S +   + +W + 
Sbjct: 60  DFKY---QDIHFTAERVYLEPDLRPLLGRKLQLDAVQVSNATLNLGKSDEPFKLPSWPES 116

Query: 128 KSTMDMIHNVILEKIHVKGGRIK----------------------IIDQESDQVYFLSDL 165
              +++   +  +KI V+  RI                       +  ++      + D 
Sbjct: 117 LPQINVPLAIQADKIDVQNLRITRLQQPMIVLRKMQGGLEVATGELRTRDLVIDTDMGDF 176

Query: 166 NLQISARFLNII---------SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA---- 212
            L       +            P +      S+     G+ D    A    A  P     
Sbjct: 177 RLHGDYIPNDDYHADLTATAVLPAARGRTPASLGLVARGDLDKMEVAIAGRAPAPLQASL 236

Query: 213 -----KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA 267
                 +   + +     L   + +    N  +       +   S +G   K  +L+ S 
Sbjct: 237 VFTGRDDPTWAFRAVTEALDTSL-LMPPANGQYAAPATPIALNLSASGKGGK-ADLQGSV 294

Query: 268 KKSRLSGNFKISDGNVRISRYKLQSILPNSS---TDEDNKTKVSQDEENLLNFSENGAES 324
           K+  LS   + S  +++     ++ ++ ++    T           +     F+ N    
Sbjct: 295 KQGELSATLQPSHISLQEQVLTVEPLVIDTFEGRTQLRGTADFRDTQNPSFRFAVNANGL 354

Query: 325 MHDLNETDFFEEEEKKN 341
                      +     
Sbjct: 355 RFTPTPDPATPDAPAVP 371


>gi|77164490|ref|YP_343015.1| hypothetical protein Noc_0975 [Nitrosococcus oceani ATCC 19707]
 gi|254434011|ref|ZP_05047519.1| hypothetical protein NOC27_942 [Nitrosococcus oceani AFC27]
 gi|76882804|gb|ABA57485.1| hypothetical protein Noc_0975 [Nitrosococcus oceani ATCC 19707]
 gi|207090344|gb|EDZ67615.1| hypothetical protein NOC27_942 [Nitrosococcus oceani AFC27]
          Length = 232

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 44/136 (32%), Gaps = 6/136 (4%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP-S 63
           +++     F  ++  A     F      +   ER  T I   ++ +     + I P    
Sbjct: 6   MILVGTIAFIAIVSVALIYAWFSLNGLIKAAIERYGTQITQTRVQIS---TVKIAPTAGG 62

Query: 64  VFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
                + I        S    ++ +S++ +   L    I + ++    P + F +S  G 
Sbjct: 63  GTISRLTISNPPGFSSSSLIALDTISIKIDASTLRQNPIIIKEIIFHSPQVFFEISLSGK 122

Query: 122 SNWFQRKSTMDMIHNV 137
           SN    +  +      
Sbjct: 123 SNIGVLRKNIVTAGEF 138


>gi|327483277|gb|AEA77684.1| Possible exported protein [Vibrio cholerae LMA3894-4]
          Length = 1279

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/340 (10%), Positives = 98/340 (28%), Gaps = 23/340 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
            +L+ L  + ++ +     +   +    F+ + +         ++A+           PS
Sbjct: 2   WLLVSLLIVLALAVTALRILLPQM--NRFQAEIQHWLNQNSSVQVAIADVQGYWRNTHPS 59

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN--------F 114
           +  + ++    +    +     + +  + L  L   +  V D+ ++   L+         
Sbjct: 60  LSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAIDWLAL 119

Query: 115 YLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172
             +     +   R    +D +    L+   +K   I       D +   +  L  Q    
Sbjct: 120 EQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQNQGL 179

Query: 173 FLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
                  +SI  I       S      G+  +    F ++A+       ++  ++     
Sbjct: 180 RHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKDQTGI 239

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285
               + L         QP   G            N E + +    SG    K ++   ++
Sbjct: 240 QKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEKGWQV 298

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
           + + L+ +  +          +    +     + +     
Sbjct: 299 NAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 336


>gi|212690584|ref|ZP_03298712.1| hypothetical protein BACDOR_00070 [Bacteroides dorei DSM 17855]
 gi|265754251|ref|ZP_06089440.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|212666830|gb|EEB27402.1| hypothetical protein BACDOR_00070 [Bacteroides dorei DSM 17855]
 gi|263234960|gb|EEZ20515.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 1552

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/345 (12%), Positives = 95/345 (27%), Gaps = 44/345 (12%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89
               +     A+   G  I+V G I +      ++   D+             +  L + 
Sbjct: 34  NFLVDKAAVYASEATGMNISV-GRISLSF--PLNLVVTDVDAASPH-KDTLLSVRRLQVN 89

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLN-------FYLSSKGVSNWFQRKSTMDMIHNVILEKI 142
            + LPLL  ++ V  + +    +N         L+      +             I+ K+
Sbjct: 90  VQLLPLLKKQVEVDGISLQGATVNSNDLIHGMRLNGTLGELFISSHGVALDPETAIVNKV 149

Query: 143 HVKGGRIKI-----------IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA 191
            +K   + +               +     L D++LQ  +  L++  PL   S+  S+  
Sbjct: 150 LLKDTDLSLCLNDTAAADTAASDTTYWKIILQDIDLQNVSFALDM--PLDSLSLAASLD- 206

Query: 192 EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG-------------NL 238
                  +       +A      +  + +++                           ++
Sbjct: 207 --NATLRDGLIDLHKSAYSLQTFRIKNGRVRYDSGRPSATASADSLSAGLDPSHIALTDI 264

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
                   Y G    A     +L      +     G    +D  +R+   KL+       
Sbjct: 265 GVKLDSLYYEGRNMKAIISQFVLKERSGVEIVSTEGRLVSNDKVLRVPSLKLE----TRD 320

Query: 299 TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN 343
           +  +    +  D  +        A  M D+ + D        ++ 
Sbjct: 321 SYLELNAAMDWDALDFKKEGLVSARLMADIGKPDVVRFMGSMDEK 365


>gi|86146577|ref|ZP_01064899.1| hypothetical protein MED222_18273 [Vibrio sp. MED222]
 gi|85835634|gb|EAQ53770.1| hypothetical protein MED222_18273 [Vibrio sp. MED222]
          Length = 656

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/358 (8%), Positives = 92/358 (25%), Gaps = 27/358 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFER-QATLIVGKKIAVKGGIKIHILP 60
           +++V +  G   ++ +     + L +    +R D         + + + ++    +    
Sbjct: 1   MKKVFMVFGIALAIAVATIAALLLSLQT-QYRTDITNFFIKHAIEQPVLIE---DVEYQS 56

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-------- 112
              +    I   Q E  +    I+ + +      +   ++    + I    L        
Sbjct: 57  PYHITLMGITQSQPEKQTP-LYIDKIDLWFSSSSITEAKLVFESVLISGLQLEADDLETL 115

Query: 113 -NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY---FLSDLNLQ 168
            + +       +     +      +     I ++       +  S   Y    LS   L 
Sbjct: 116 TSLFTQPSIKIHQLAINNLDFSTPDFNARGIDLQISDPTWNNDNSLLPYGKTQLSASQLY 175

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
                 + +          S +   + ++   + + +        +        L     
Sbjct: 176 WQGEAFDNLLIDLDLKPSDSTLYGASFDWRGAKISGQAEQYQQDWSLVNVTVDGLRLNQK 235

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
                L         Q  +     +     +  +  L+A        F  S  N+++   
Sbjct: 236 QTQSLLSKEWDVAGIQINHINSLDILRSDVEWQDGHLAA--------FDASLENIQLPFE 287

Query: 289 KLQSILPNSSTDEDN-KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
             +      S   +          E  +  + +  + + +   T F +   + N    
Sbjct: 288 LWKQQRAIFSLQAEGVSIDDDMFIEPSIKLNLDPNQILIEDFYTQFLQGTVQLNGKVT 345


>gi|229530264|ref|ZP_04419652.1| hypothetical protein VCG_003380 [Vibrio cholerae 12129(1)]
 gi|229332037|gb|EEN97525.1| hypothetical protein VCG_003380 [Vibrio cholerae 12129(1)]
          Length = 1279

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/340 (10%), Positives = 98/340 (28%), Gaps = 23/340 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
            +L+ L  + ++ +     +   +    F+ + +         ++A+           PS
Sbjct: 2   WLLVSLLIVLALAVTALRILLPQM--NRFQAEIQHWLNQNSSVQVAIADVQGYWRNTHPS 59

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN--------F 114
           +  + ++    +    +     + +  + L  L   +  V D+ ++   L+         
Sbjct: 60  LSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAIDWLAL 119

Query: 115 YLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172
             +     +   R    +D +    L+   +K   I       D +   +  L  Q    
Sbjct: 120 EQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQNQGL 179

Query: 173 FLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
                  +SI  I       S      G+  +    F ++A+       ++  ++     
Sbjct: 180 RHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKDQTGI 239

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285
               + L         QP   G            N E + +    SG    K ++   ++
Sbjct: 240 QKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEKGWQV 298

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
           + + L+ +  +          +    +     + +     
Sbjct: 299 NAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 336


>gi|255536197|ref|YP_003096568.1| hypothetical protein FIC_02064 [Flavobacteriaceae bacterium
           3519-10]
 gi|255342393|gb|ACU08506.1| hypothetical protein FIC_02064 [Flavobacteriaceae bacterium
           3519-10]
          Length = 1682

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/274 (12%), Positives = 90/274 (32%), Gaps = 17/274 (6%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +L+   I +G L  ++++ A ++ L       +          +  K+ +    ++++  
Sbjct: 19  ILKYTAIFIGSLLLLLVILALSLQLPGVQNFAKGKLVNYLEEKIHTKVRLD---RVYVGF 75

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             S+  +++ +  +E        + L +      LL     +  + +     N   S  G
Sbjct: 76  PNSLVMENLYLQGQE-VDTLLFAKKLDVGLNIPKLLKNTADLTSIDLQGVKANVVRSKDG 134

Query: 121 VSNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
             N+            + +      + L+KI ++  R+  IDQ+S     L   +     
Sbjct: 135 RFNFDYIIDAFATKDSEESESKPFIISLDKIKLRDIRVSFIDQQSRNDIALYFKSFDTRV 194

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
           +  ++ +                   D  +  A  +     + N+   +KI L  + +  
Sbjct: 195 KTFDLQNNSYAAGDINMDGLRLKLKQDLLEEVAENVEEKVDSLNQQKPMKIGLNKIKFT- 253

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLE 264
             +   +   +  +     +F         L+LE
Sbjct: 254 --NFNIDYGDDNSKTFAKVIFKELSTKINQLDLE 285


>gi|229512649|ref|ZP_04402118.1| hypothetical protein VCB_000289 [Vibrio cholerae TMA 21]
 gi|229350326|gb|EEO15277.1| hypothetical protein VCB_000289 [Vibrio cholerae TMA 21]
          Length = 1279

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/340 (10%), Positives = 98/340 (28%), Gaps = 23/340 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
            +L+ L  + ++ +     +   +    F+ + +         ++A+           PS
Sbjct: 2   WLLVSLLIVLALAVTALRILLPQM--NRFQAEIQHWLNQNSSVQVAIADVQGYWRNTHPS 59

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN--------F 114
           +  + ++    +    +     + +  + L  L   +  V D+ ++   L+         
Sbjct: 60  LSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAIDWLAL 119

Query: 115 YLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172
             +     +   R    +D +    L+   +K   I       D +   +  L  Q    
Sbjct: 120 EQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQNQGL 179

Query: 173 FLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
                  +SI  I       S      G+  +    F ++A+       ++  ++     
Sbjct: 180 RHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKDQTGI 239

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285
               + L         QP   G            N E + +    SG    K ++   ++
Sbjct: 240 QKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEKGWQV 298

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
           + + L+ +  +          +    +     + +     
Sbjct: 299 NAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 336


>gi|114777074|ref|ZP_01452094.1| hypothetical protein SPV1_06919 [Mariprofundus ferrooxydans PV-1]
 gi|114552595|gb|EAU55055.1| hypothetical protein SPV1_06919 [Mariprofundus ferrooxydans PV-1]
          Length = 881

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 80/306 (26%), Gaps = 19/306 (6%)

Query: 55  KIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            I   PF         +     G     +  LS++ ++LPLL  ++ +  +++    L  
Sbjct: 54  DIDFNPFTG----SFVLVGLNAGKGM-HVRRLSVKVDWLPLLKRKVLIHSLHLHGGDLRV 108

Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
              + GV  +   +                   ++   D         SD+NL +  R  
Sbjct: 109 QQDAHGVWQFGSIRLDDTAGEATPEADAGSSDWQVAPAD------VQFSDINLHLEGRLS 162

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANF-PAKNKAISLKIQLFPLAYPIIID 233
           +    LS+     ++   G         + +             +L          I +D
Sbjct: 163 DKPLSLSLPIQLLTLHLRGADASGRHGMSLRFQTGPVDLIIAGYNLAYTTLETDGDIRLD 222

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN--FKISDGNVRISRYKLQ 291
             GN          +    +     K ++    A    +         DG V      L 
Sbjct: 223 A-GNQDLLTGLRTGTLRVGLGRVSLKDMDGVQLASLESVDIRDLGVHMDGKVTAGMVDLV 281

Query: 292 SILPNSSTDEDNKTKVSQDEENLLNFSENG----AESMHDLNETDFFEEEEKKNKNDDLK 347
           +     +   +        +   ++   NG    A    D        +       D +K
Sbjct: 282 APKVTDALTGNGAMGAKAVKLQNVHVVANGKVSVASLSLDSVTAPDMNKSSANVSVDRVK 341

Query: 348 KDDIQY 353
              I  
Sbjct: 342 AQQITV 347


>gi|229507060|ref|ZP_04396566.1| hypothetical protein VCF_002282 [Vibrio cholerae BX 330286]
 gi|229508785|ref|ZP_04398277.1| hypothetical protein VCE_000191 [Vibrio cholerae B33]
 gi|229519773|ref|ZP_04409216.1| hypothetical protein VCC_003805 [Vibrio cholerae RC9]
 gi|229606299|ref|YP_002876947.1| hypothetical protein VCD_001202 [Vibrio cholerae MJ-1236]
 gi|255743805|ref|ZP_05417762.1| possible exported protein [Vibrio cholera CIRS 101]
 gi|262153582|ref|ZP_06028710.1| possible exported protein [Vibrio cholerae INDRE 91/1]
 gi|262167616|ref|ZP_06035320.1| possible exported protein [Vibrio cholerae RC27]
 gi|229344462|gb|EEO09437.1| hypothetical protein VCC_003805 [Vibrio cholerae RC9]
 gi|229354188|gb|EEO19119.1| hypothetical protein VCE_000191 [Vibrio cholerae B33]
 gi|229355805|gb|EEO20725.1| hypothetical protein VCF_002282 [Vibrio cholerae BX 330286]
 gi|229368954|gb|ACQ59377.1| hypothetical protein VCD_001202 [Vibrio cholerae MJ-1236]
 gi|255738554|gb|EET93942.1| possible exported protein [Vibrio cholera CIRS 101]
 gi|262023952|gb|EEY42649.1| possible exported protein [Vibrio cholerae RC27]
 gi|262030609|gb|EEY49245.1| possible exported protein [Vibrio cholerae INDRE 91/1]
          Length = 1279

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/340 (10%), Positives = 98/340 (28%), Gaps = 23/340 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
            +L+ L  + ++ +     +   +    F+ + +         ++A+           PS
Sbjct: 2   WLLVSLLIVLALAVTALRILLPQM--NRFQAEIQHWLNQNSSVQVAIADVQGYWRNTHPS 59

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN--------F 114
           +  + ++    +    +     + +  + L  L   +  V D+ ++   L+         
Sbjct: 60  LSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAIDWLAL 119

Query: 115 YLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172
             +     +   R    +D +    L+   +K   I       D +   +  L  Q    
Sbjct: 120 EQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQNQGL 179

Query: 173 FLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
                  +SI  I       S      G+  +    F ++A+       ++  ++     
Sbjct: 180 RHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKDQTGI 239

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285
               + L         QP   G            N E + +    SG    K ++   ++
Sbjct: 240 QKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEKGWQV 298

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
           + + L+ +  +          +    +     + +     
Sbjct: 299 NAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 336


>gi|229525114|ref|ZP_04414519.1| hypothetical protein VCA_002723 [Vibrio cholerae bv. albensis
           VL426]
 gi|229338695|gb|EEO03712.1| hypothetical protein VCA_002723 [Vibrio cholerae bv. albensis
           VL426]
          Length = 1279

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/340 (10%), Positives = 98/340 (28%), Gaps = 23/340 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
            +L+ L  + ++ +     +   +    F+ + +         ++A+           PS
Sbjct: 2   WLLVSLLIVLALAVTALRILLPQM--NRFQAEIQHWLNQNSSVQVAIADVQGYWRNTHPS 59

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN--------F 114
           +  + ++    +    +     + +  + L  L   +  V D+ ++   L+         
Sbjct: 60  LSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAIDWLAL 119

Query: 115 YLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172
             +     +   R    +D +    L+   +K   I       D +   +  L  +    
Sbjct: 120 EQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWKNQGL 179

Query: 173 FLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
                  +SI  I       S      G+  +    F ++A+       ++  ++     
Sbjct: 180 RHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRVLPWLTRYLKDQTGI 239

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285
               + L         QP   G            N E + +    SG    K ++   ++
Sbjct: 240 QKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEKGWQV 298

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
           + + L+ +  +          +    +     + +     
Sbjct: 299 NAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 336


>gi|237745440|ref|ZP_04575920.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
 gi|229376791|gb|EEO26882.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
          Length = 1096

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/330 (14%), Positives = 95/330 (28%), Gaps = 49/330 (14%)

Query: 75  EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW---------- 124
           + G    K+  + +      +LSG I +  + + QP L    +  G  N           
Sbjct: 293 KGGKTLLKMPEMGVDIARSDILSGNIGLSHIRLKQPELYLDRNKAGQWNVERLARIDMKK 352

Query: 125 -----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
                        +     ++ ++ L ++ ++ G+++I DQ        S  N  ++A  
Sbjct: 353 IPEKADSGNLKADKTHKESLLWSIALGQLTLEEGQLQIHDQVQVVPANFSMRNFGLNA-- 410

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
                        G ++ + +G                  +  ++             I 
Sbjct: 411 -------------GDIVLDISGRNATVGKLVSTGTQVQFVHGKLNFP------EDKKRIR 451

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLEL---SAKKSRLSGNFKISDGNVRISRYKL 290
                  +E +      F V         +      A K  ++   +I   NV I     
Sbjct: 452 KSAQKTVSEMEAQTGFGFHVNRLELNDWGVHFENRDAGKPVVT---RIDGLNVAIDHLSD 508

Query: 291 QSILPNSSTDEDNKTKVSQDEEN-LLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349
            +  P   +      +      N  LN S   A+   +L + D    +       +L   
Sbjct: 509 NTEQPVQLSVNAGVNRRGTIAVNGSLNLSPFVADLDLNLKDVDVRFIQPYIEDFVNLSLK 568

Query: 350 DIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
               +V  K     +  +  Q  F+GD  I
Sbjct: 569 QADLTVQGKLRLSQTKRQAIQGRFTGDAGI 598


>gi|95929903|ref|ZP_01312644.1| hypothetical protein Dace_2557 [Desulfuromonas acetoxidans DSM 684]
 gi|95134199|gb|EAT15857.1| hypothetical protein Dace_2557 [Desulfuromonas acetoxidans DSM 684]
          Length = 1009

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 91/317 (28%), Gaps = 29/317 (9%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89
                    + +  +   + +K   ++   P P++ F +I I+        + I  L +R
Sbjct: 32  EQIGAMISSRLSDNLKTPVTLK-KARLGFHPRPTLDFTEITIEANHRFK--ATIPQLHVR 88

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNF-YLSSKGVSNWFQRKSTMDMIHNVILE--KIHVKG 146
             +  LL G++    + +  P +     + +  S+      T        L    I ++ 
Sbjct: 89  VSWRDLLQGQLAHSHITVVDPQIYLLPHTLQAPSDATPSSGTPFDWRKAHLPQLHITIER 148

Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKI 206
           G I +             ++   +    +  + LS        + +G+      R     
Sbjct: 149 GEIHLA-APHGDTPQFWQISELAAKLTPSGKTGLSFQGSGNLHLPDGSIATIFSRIELSG 207

Query: 207 TANFPAKNKAISLKIQLFPLA--------YPIIIDLFGNLFWNEKQPIYSG---VFSVAG 255
                     +  + ++            +P  ID   N+  + +   + G     +V  
Sbjct: 208 -MTHELGLATVQAQGKVSNTTLPASLQKAWPFQIDGRLNIQSDWRGNFHDGLRLQATVKP 266

Query: 256 DFSKLLNLELSAKKSR-----LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD 310
             + L     +A   +     LS   + +D         L      +      +   S D
Sbjct: 267 TAAPLQLRHANAPTIQVNQCTLSCRLQQTDELFTFDEATL----SLNKMKLSGQGFWSSD 322

Query: 311 EENLLNFSENGAESMHD 327
                  + N    M +
Sbjct: 323 LS-HYGITANSNAIMLE 338


>gi|229520011|ref|ZP_04409440.1| hypothetical protein VIF_000526 [Vibrio cholerae TM 11079-80]
 gi|229342960|gb|EEO07949.1| hypothetical protein VIF_000526 [Vibrio cholerae TM 11079-80]
          Length = 1279

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/340 (10%), Positives = 98/340 (28%), Gaps = 23/340 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
            +L+ L  + ++ +     +   +    F+ + +         ++A+           PS
Sbjct: 2   WLLVSLLIVLALAVTALRILLPQM--NRFQAEIQHWLNQNSSVQVAIADVQGYWRNTHPS 59

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLN--------F 114
           +  + ++    +    +     + +  + L  L   +  V D+ ++   L+         
Sbjct: 60  LSLQTLQAHWPDSNDIQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAIDWLAL 119

Query: 115 YLSSKGVSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESD-QVYFLSDLNLQISAR 172
             +     +   R    +D +    L+   +K   I       D +   +  L  Q    
Sbjct: 120 EQNPNPKQSRQGRVVKQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLDIEKLRWQNQGL 179

Query: 173 FLNIISPLSIDSIK-----GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
                  +SI  I       S      G+  +    F ++A+       ++  ++     
Sbjct: 180 RHFAEGVVSIAGININSLLVSANFIDHGSLRDVSGDFYVSADKVRILPWLTRYLKDQTGI 239

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG--NFKISDGNVRI 285
               + L         QP   G            N E + +    SG    K ++   ++
Sbjct: 240 QKGQVSLNAWATLEHNQPK-DGYVEFKPSELVWQNGEQTHELLLESGIVELKPTEKGWQV 298

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
           + + L+ +  +          +    +     + +     
Sbjct: 299 NAHSLR-LRSDDELWPLLDVAMDWQPD-EWRLNLSQLNIE 336


>gi|157737395|ref|YP_001490078.1| hypothetical protein Abu_1149 [Arcobacter butzleri RM4018]
 gi|157699249|gb|ABV67409.1| conserved hypothetical protein (DUF748 domain protein) [Arcobacter
           butzleri RM4018]
          Length = 919

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/378 (9%), Positives = 110/378 (29%), Gaps = 26/378 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP- 60
           L+ +   L  L  + ++  FT+  ++     +++  +     +  K +++    +   P 
Sbjct: 4   LKILFYTLISLLVIYIISGFTLVPYL----LKKELIKNLDENLTLKSSIE---DVKFNPI 56

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSK 119
             +    D ++  + +       + L++       +     R+ ++  D+  LN      
Sbjct: 57  TLNAKVHDFKLVDENNNI-IVFFKELNISLSIFKSIEQKHFRIENITFDEIFLNIIQEKD 115

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           G  N        +      +E    +     I    S      +D+N   +         
Sbjct: 116 GSINLANILKPTENEEK-QIEDNTDEQTSNNIKFLVSKIDLKNADINFVSNIDKQPFSIY 174

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
           L   +     +     +  +    F+I      ++  + +        +     +  N  
Sbjct: 175 LKDINYTIYDLGTFKNSLSSNNLTFRIN-----EHTDVQISSAFKINPFKAYGKISINDL 229

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI--SDGNVRISRYKLQSILPNS 297
             ++   +   F      +              +    +  +   + I+   L+      
Sbjct: 230 RIKEFIDFDKNFFNFELNNDANINLGLNYNIDTTNELALYLATDLLEINNINLKQNKKTM 289

Query: 298 STDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKN-DDLKKDDIQYSVN 356
                    + + +    +F         +    D  +     +KN  +        + +
Sbjct: 290 -------ASLKKLDIKRFDFDLVSQNINFNGVFIDGLKANMILDKNGVNFASLVTTSTNS 342

Query: 357 KKEEKDNSHDKENQENFS 374
            +++++NS+ K    NFS
Sbjct: 343 NEKKEENSNSKPWILNFS 360


>gi|89093939|ref|ZP_01166884.1| hypothetical protein MED92_01544 [Oceanospirillum sp. MED92]
 gi|89081825|gb|EAR61052.1| hypothetical protein MED92_01544 [Oceanospirillum sp. MED92]
          Length = 1289

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 14/303 (4%)

Query: 19  GAFTVPLFI--DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ--K 74
                   I  D +D+R+D E+  +  +  ++ + G         P+V      +D    
Sbjct: 25  VFLVSVRLIVDDLSDYRQDIEKLLSEQLSARVHIAGISGGWRGAHPAVKLHSFSLDGLSA 84

Query: 75  EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134
           + G   + + G         +           +    + + L+        +  +    +
Sbjct: 85  DSGLSLALLNGEVALDPLASVKQLAPIFSQFDLSGLTVRYDLAKADQKQLSEGGAQKSAV 144

Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
            +          G   +          + D  + +  +  + IS               +
Sbjct: 145 AHQPSTSQSRSDGSGLLEFLLLQSAVNIDDTQIVVRQKNGDEISVSP---------IHLS 195

Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN-EKQPIYSGVFSV 253
              D      K+ A+  AK     +         P        L  +     + +   S+
Sbjct: 196 LQNDGVLHQLKVNADLVAKTGTADITFVAEVEGDPKRSTTDFYLNISGLSAQLLNPWLSL 255

Query: 254 AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313
           A    + L+ E        +G      G   I R+K +    +  +      +     + 
Sbjct: 256 ADISIEDLDAEQEIWGQSKAGKLIYLTGKTGIKRFKFEEYAFDDFSLHTALIRRDSGYQL 315

Query: 314 LLN 316
            LN
Sbjct: 316 QLN 318


>gi|99034162|ref|ZP_01314251.1| hypothetical protein Wendoof_01000954 [Wolbachia endosymbiont of
          Drosophila willistoni TSC#14030-0811.24]
          Length = 98

 Score = 48.0 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 5/79 (6%)

Query: 22 TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--- 78
              F DW+ +R+   ++       K+ + G IK+ ++  P +   ++ +   E+     
Sbjct: 20 VAATFKDWSGYRKYIIKELEKTYDAKVHIGGKIKVSLI-TPKLTIYNVYVQYNENKEQKL 78

Query: 79 -FESKIEGLSMRAEFLPLL 96
               +  + +R  FL L 
Sbjct: 79 SDLISVRKIEIRPSFLSLF 97


>gi|296534909|ref|ZP_06897224.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
 gi|296264764|gb|EFH11074.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
          Length = 345

 Score = 48.0 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/287 (7%), Positives = 66/287 (22%), Gaps = 30/287 (10%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLS-------MRAEFLPLLSGEIRVFDM----YIDQPH 111
              F  + +  +      +++ G         +R          +    +     +    
Sbjct: 57  RFGFHGVTVAAEGGSGPLARLTGTLPGDGAWPLRLALAAPGLQLVAEGSLAQPDVLGGWR 116

Query: 112 LNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
           L    +++  +        +     + L  + +       + Q +      + L   ++A
Sbjct: 117 LTLEATAEDATRLAPFLGPLPPAQGIDL-SLDLADAGPGALPQINRLRLRSTGLATPLAA 175

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
                ++ + +      V        +      +       +              +P+ 
Sbjct: 176 GLRLGLTSIGVSGPGEPVSLSAALTLNALPLQAEARLPPLPRMMQG---AAAPDSPWPLR 232

Query: 232 IDLFGNL------FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS-----RLSGNFKISD 280
             L G           +         + +   +  L   LS         RL+G  +   
Sbjct: 233 ATLRGEGLEASAEGQWKGGQEGELSLTASAADTASLLAALSLPAPLLTEARLTGRLRRDG 292

Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
               +   +L S         + +    + +   L           D
Sbjct: 293 RRTSLDELRLTS----RQLQAEGEAAWQEGDRPALTARLAAQRVDLD 335



 Score = 39.5 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 21/186 (11%), Positives = 51/186 (27%), Gaps = 22/186 (11%)

Query: 127 RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186
                     + +  I ++GGR+   D  + +   L                 L  +   
Sbjct: 1   AAREDAQSLPLTVAAIAIEGGRLGWRDARAGRSETLD-----------IRRFDLEAEHPD 49

Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKN-----KAISLKIQLFPLAYPIIIDLFGNLFWN 241
             +   G   F     A +  +   A+         +  ++L   A  + +   G+L   
Sbjct: 50  APMRFAGRFGFHGVTVAAEGGSGPLARLTGTLPGDGAWPLRLALAAPGLQLVAEGSLAQP 109

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV------RISRYKLQSILP 295
           +    +        + +  L   L         +  +   +       +I+R +L+S   
Sbjct: 110 DVLGGWRLTLEATAEDATRLAPFLGPLPPAQGIDLSLDLADAGPGALPQINRLRLRSTGL 169

Query: 296 NSSTDE 301
            +    
Sbjct: 170 ATPLAA 175


>gi|325498824|gb|EGC96683.1| hypothetical protein ECD227_2921 [Escherichia fergusonii ECD227]
          Length = 1245

 Score = 48.0 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 81/298 (27%), Gaps = 17/298 (5%)

Query: 13  FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRI 71
             +V      +P       +R +   +     G  +     +      F P++  +DI  
Sbjct: 2   ALLVSGLRLALPHL---DHWRPEILNKIESATGVPVD-ASQLSASWQTFGPTLEARDIHA 57

Query: 72  DQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQRKS 129
           D K+ G     ++ +++  +    LL    +  D+   Q           G        S
Sbjct: 58  DLKDGGE--FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPIEPGDGGEGLEGS 115

Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSIDSI 185
            +  +     +   ++   +  I     +       L+ LN Q   R    +S  S+   
Sbjct: 116 QLSDLFLRQFDHFDLRDSEVSFITLSGQRAELAIPQLTWLNDQARHRAEGQVSLSSLTGQ 175

Query: 186 KGSVIAEGTG-NFDNKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFWNE 242
            G +       + D      +I       +    L   +Q           L G +  ++
Sbjct: 176 HGVMQVRMDLQDNDGLLKDGRIWLQADDIDVKPWLGKWMQANIALETAQFSLEGWMTIDD 235

Query: 243 KQPIYSGV-FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
              I   +     G          S     L+ +        + S    +  + +   
Sbjct: 236 GDIIGGDIWLKKGGASWLGEGKTHSLSVDNLTAHITREQPGWQFSIPDTRITMDDKPW 293


>gi|149641710|ref|XP_001505789.1| PREDICTED: similar to AHNAK nucleoprotein, partial [Ornithorhynchus
            anatinus]
          Length = 5946

 Score = 48.0 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/350 (13%), Positives = 100/350 (28%), Gaps = 56/350 (16%)

Query: 49   AVKGGIKIHI---------------LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93
             VKG + + +                P   +   D+ I   +      K++         
Sbjct: 3060 KVKGDVDVSLPTLEGEVKVPDVDIKGPKLDISAPDVDIHGPDWNLKMPKMKMPKFSV--- 3116

Query: 94   PLLSGE---------IRVFDMYIDQPHLNFYLSS---KGVSNWFQRKSTMDMIHNVILEK 141
            P   GE         +   D+ I  P ++        +G     +         N+   K
Sbjct: 3117 PGFKGEGPDVNVDVDLPKGDIDISGPKVDIEAPDVSIEGPEGKLKGPKFKMPEMNIKGPK 3176

Query: 142  IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG-TGNFDNK 200
            I +    + +   +      +  L   +    +++  P ++D     +   G  G     
Sbjct: 3177 ISMPDFDLNLKGPKVKGDIDVPQLEGDLKGPSIDVKVP-TLDIDAPDIDIHGPEGKLKGP 3235

Query: 201  RSAF-KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259
            +     +  N P  +     +I L      +  D+  ++   E            G    
Sbjct: 3236 KLKMPDMHVNMPKISMP---EIDLNLKGSKLKGDVDVSIPKVEG--------DFKGPKLD 3284

Query: 260  LLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319
            +   E+     +LS   K      ++ ++        +  + D K K     +  ++   
Sbjct: 3285 VKGPEIDITSPKLSVEGKPKKSRFKLPKFHFSGPKVQTP-EVDAKVK-----KPDVDL-- 3336

Query: 320  NGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369
               ++  D+N  D   E   K K    K   +  S  K    D   + ++
Sbjct: 3337 --GDAKVDINAPDV--EVHGKVKGSKFKMPFLSISSPKVSMPDVELNLKS 3382



 Score = 40.3 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 93/309 (30%), Gaps = 36/309 (11%)

Query: 53   GIKIHILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110
             I +   P   +   D+ I+  E      + K+  ++++A  + +       FD+ +  P
Sbjct: 4102 DIDVS-GPKVDIEAPDLNIEGPEGKLKGPKFKMPEVNIKAPKISM-----PDFDLNLKGP 4155

Query: 111  HLNFYLSSKGVSNWFQRKSTMD-MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
             +      KG  +    +   D    +  L+   V  G   +     D    +  + +  
Sbjct: 4156 KI------KGDVDVSVPQIEGDIKGPDFDLKGPKVDIGAPDVDVHGPDWNLKMPKVKMPK 4209

Query: 170  SARFLNIISPLSIDSIKGSVIAEGTG-NFDNKRSAFKITANFPAKNKAI----SLKIQLF 224
                        +D        + +G   D +     I                +     
Sbjct: 4210 FHMPGFKGEGPDVDVNLPKADIDVSGPKVDIEAPDVHIEGPEGKVKGPKFKMPEMHFHAP 4269

Query: 225  PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL---SGNFKISDG 281
             ++ P   D   NL     +              K   +++   K  +   + + +  +G
Sbjct: 4270 KISMP---DFDLNLKGPRGKGDIDVALPKVEGDLKGPEVDIKGPKLDIDTPNIDIEGPEG 4326

Query: 282  NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN 341
             V+  ++K+  +  ++      K  +        + +  G +   D+N +    E + K 
Sbjct: 4327 KVKGPKFKMPEMHFHAP-----KISM-----PDFDLNLKGPKVKGDINASLPKVEGDLKG 4376

Query: 342  KNDDLKKDD 350
               D+K  +
Sbjct: 4377 PEIDIKGPE 4385



 Score = 39.1 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 42/351 (11%), Positives = 105/351 (29%), Gaps = 56/351 (15%)

Query: 53   GIKIHILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPL--------------- 95
             I I   P   +   D+ I+  E      + K+  +  +A  + +               
Sbjct: 1230 DIDIS-GPKLDIDAPDVTIEGPEGKLKGPKFKMPEMHFKAPKISMPDVDLNLKGPKVKGD 1288

Query: 96   -------LSGEIRVFDMYIDQPHLNFYL-SSKGVSNWFQRKSTMDMIHNVILEKIHVKGG 147
                   + GE++V D+ I  P L+            +  K     +    +     +G 
Sbjct: 1289 VDVSVPKIEGEVKVPDVDIKGPKLDVSAPDVDVHGPDWNLKMPKMKMPKFHMPGFRGEGP 1348

Query: 148  RIKIIDQE-----SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA------EGTGN 196
             + +   +     S     +   ++ I      +  P      +    A      +   N
Sbjct: 1349 EVDVTLPKGDIDVSGPKVDIDAPDVTIEGPEGKLKGP-KFKMPEMHFKAPKISMPDVDLN 1407

Query: 197  FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII---DLFGNLFWNEKQ--PIYSGVF 251
                +    +  + P     + +   +      + I   D+  +      +   +    F
Sbjct: 1408 LKGPKVKGDVDVSVPKIEGEVKVP-DVDIKGPKLDISAPDVDVHGPDWNLKMPKMKMPKF 1466

Query: 252  SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD------EDNKT 305
             + G   +  +++++  K    G+ ++S   V IS   +    P++          +   
Sbjct: 1467 HMPGFKGEGPDVDVNLPK----GDIEVSGPKVDISAPDVHIDAPDAKFKGPKFKMPEMNI 1522

Query: 306  KVSQDEENLLNFSENGAESMHDLNETDFFEEEEK-KNKNDDLKKDDIQYSV 355
            K  +     +  +  G +   +  E +  + E + K  + D+K   +  S 
Sbjct: 1523 KAQKISMPDVGLNLKGPKVKGEY-EVEVPKVEGEMKVPDVDIKGPKLDISA 1572


>gi|222087410|ref|YP_002545947.1| hypothetical protein Arad_4271 [Agrobacterium radiobacter K84]
 gi|221724858|gb|ACM28014.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 1394

 Score = 47.6 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/399 (12%), Positives = 102/399 (25%), Gaps = 32/399 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +LR V   +  +  + ++    V      T +  +   +      + I +     +    
Sbjct: 11  LLRFVGYVVVAILVLAIIAVLVVGFVPGATGYAVNRVAKLVSTPDRTITIAQPSGL---L 67

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-NFYLSSK 119
             S+    I +   +     +K++ L++    L LL+G      +  D   L    +S+ 
Sbjct: 68  TGSLRVGAITVTDTKG--TVAKVQNLAIDWSPLSLLTGTFHADRVAADVVDLQRLPVSTV 125

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
                     +      + L+   +    ++I    + Q + L   N  + A   +I   
Sbjct: 126 KAEPQAATSESSGFSLPIALDIGAIALPDLRISQAVAGQDFALV-ANGSVKANNNSIDLV 184

Query: 180 LSIDSIKGS-VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
           L+ +             +F    +   + A+       +   +   P    I I+L G  
Sbjct: 185 LNANRQDVPDAKLSTNISFAPAENRLNLKADVAEPRDGLLAGLLHLPGGPAIDINLSGEG 244

Query: 239 FWNEKQPIYSGVFS-----------------VAGDFSKLLNLELSAKKSRLSGNFKIS-- 279
             +                            +     K      S     L   F     
Sbjct: 245 PLSNWAGKLQAALDDKPTVSISGQHTMSADGLHHIDVKGGGDVDSLLPPTLRPLFAGQTT 304

Query: 280 -DGNVRIS---RYKLQSILP-NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334
            D +       +  +Q+      S        +     N LN +  G     D       
Sbjct: 305 IDLSATFDGKGKIDIQTGNLATGSVVIAASGTLDPSGNNSLNANLLGTSGPVDFRWPMEN 364

Query: 335 EEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENF 373
            E   K    DL       S     +         Q   
Sbjct: 365 GELRAKISRADLALTGASQSAKIDAKASLESASAPQGQI 403


>gi|301624424|ref|XP_002941506.1| PREDICTED: LOW QUALITY PROTEIN: neuroblast differentiation-associated
            protein AHNAK [Xenopus (Silurana) tropicalis]
          Length = 4006

 Score = 47.6 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 99/311 (31%), Gaps = 31/311 (9%)

Query: 49   AVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYID 108
             V+G +K    P   +   ++ ++  +       +  +    +  P + G+++   + I 
Sbjct: 963  KVEGDLK---GPKVDIKAPEVNLEAPD--MPSLHMPDIDFNLK-GPKVEGDLKGPKVDIK 1016

Query: 109  QPHLNFY---LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
             P +N     +   G     + K       ++    ++VKG +++   +       +   
Sbjct: 1017 APEVNLEAPDVDVDGKVKGPKFKMPSMPKVSMPDLGLNVKGPKVE--GELKGPKIDMKGP 1074

Query: 166  NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKI-QLF 224
             + ++   + +  P            EG       +      +      K I +K+ +  
Sbjct: 1075 EVDVAIPDVELEGP------------EGKLKMPKFKMPKFGFSGSKVDGKEIDIKLPEGE 1122

Query: 225  PLAYPIIIDLFG-NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
                   +D+    L     +    G          + +++ + K  +L G+ K    ++
Sbjct: 1123 IDLSGPKLDISAPELDIECPEGKVKGS-KFKMPSLHMPDIDFNLKGPKLEGDLKSPKVDI 1181

Query: 284  RISRYKLQSILPNSSTDEDN-KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK 342
            +     L++   +        K K+       ++F+  G +   DL         + +  
Sbjct: 1182 KAPEVNLEAPAVDIDGKVKGSKFKMPSLHMPDIDFNLKGPKVEGDLKGPKV----DIRAP 1237

Query: 343  NDDLKKDDIQY 353
              + +  D+  
Sbjct: 1238 EVNFEAPDVDI 1248



 Score = 42.6 bits (98), Expect = 0.093,   Method: Composition-based stats.
 Identities = 41/332 (12%), Positives = 103/332 (31%), Gaps = 43/332 (12%)

Query: 41   TLIVGKKIAV---KGGIKIHILPFPSVFFKDIRIDQKEDGS-------FESKIEGLSMRA 90
            +   GK + +   +G I I   P   +    + I+  E              +  +    
Sbjct: 2978 SKADGKDVDIKLPEGEIDIS-GPKVDISAPKLDIECPEGKVKGPKFKMPSLHMPDIDFNL 3036

Query: 91   EFLPLLSGEIRVFDMYIDQPHLNFY---LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGG 147
            +  P + G+++   + I  P +N     +   G     + K            K+ +   
Sbjct: 3037 K-GPKVEGDLKGPKVDIRAPEVNLEAPDVDIDGKVKGPKFKMPSMP-------KVSMPDL 3088

Query: 148  RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207
             + I   + +  +    ++++     + I   + ++  +G +       F   +  F  +
Sbjct: 3089 GLNIKGPKMEGEFKGPKIDMKGPQVDVAIP-DVELEGPEGKLKMP---KFKMPKFGFSGS 3144

Query: 208  ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA 267
                 K+  I L      ++ P +      L     +    G          + +++L+ 
Sbjct: 3145 -KVDGKDVDIKLPEGEIDVSGPKVDISAPELDIECPEGKLKGS-KFKMPSLHMPDIDLNL 3202

Query: 268  KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT----KVSQDEENLLNFSENGAE 323
            K  +L G+ K    +++     L++   +              V +     L  +  G +
Sbjct: 3203 KSPKLEGDLKDPKVDIKAPEINLEAPDVDMDGKVKGPKFKMPSVPKVSMPDLGLNVKGPK 3262

Query: 324  SMHDLNETDFFEEEEKKNKNDDLKKDDIQYSV 355
                        E E K    D+K  ++  ++
Sbjct: 3263 V-----------EGELKGPKIDMKGPEVDVAI 3283



 Score = 42.2 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 93/296 (31%), Gaps = 37/296 (12%)

Query: 64   VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY---LSSKG 120
            V   D+ ++  E      K + +           G+++   + I  P +N     +   G
Sbjct: 2802 VAIPDVELEGPEGKLKMPKFKMVE----------GDLKGPKVDIRAPEVNLEAPDVDIDG 2851

Query: 121  VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                 + K     + ++     ++KG +++   +         ++NL+     ++     
Sbjct: 2852 KVKGSKFKMPSLHMPDLD---FNLKGPKVEGDLKGPKVDIRAPEVNLEAPDVDVDGKVKG 2908

Query: 181  SIDSIKGSVIA-EGTGNFDNKRSAFKITANFPAKNK-AISLKIQLFPLAYPIIIDLFGNL 238
            S   +       +   N    +   +            + + I    L  P      G L
Sbjct: 2909 SKFEMPSLXNMPDLDFNLKGPKMEGEFKGPKIDMKGSQVDVAIPDVELEGP-----EGKL 2963

Query: 239  FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG-NFKISDGNVRISRYKLQSILPNS 297
               +   +    FS +    K ++++L   +  +SG    IS   + I   + +   P  
Sbjct: 2964 KMPK-FKMPKFGFSGSKADGKDVDIKLPEGEIDISGPKVDISAPKLDIECPEGKVKGP-- 3020

Query: 298  STDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353
                  K K+       ++F+  G +   DL         + +    +L+  D+  
Sbjct: 3021 ------KFKMPSLHMPDIDFNLKGPKVEGDLKGPKV----DIRAPEVNLEAPDVDI 3066



 Score = 39.9 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 98/307 (31%), Gaps = 36/307 (11%)

Query: 60   PFPSVFFKDIRIDQKEDGS----FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
            P  ++   D+ ID K  GS        +  +    +  P + G+++   + I+ P +N  
Sbjct: 1784 PEVNLEAPDVDIDGKVKGSKFKMPSLHMPDIDFNLK-GPKVEGDLKGPKVDINAPEVNLE 1842

Query: 116  ---LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
               +   G                  + K+ +    + I   + +  +    ++++    
Sbjct: 1843 ALDVDIDGK-------VKGPKFKMPSVPKVSMPDLGLNIKGPKMEGEFKGPKIDMKGPQV 1895

Query: 173  FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             + I   + ++  +G +       F   +  F  +     K+  I L      ++ P + 
Sbjct: 1896 DVAIP-DVELEGPEGKLKMP---KFKMPKFGFSGS-KVDGKDVDIKLPEGEIDVSGPKVD 1950

Query: 233  DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
                 L     +    G          + +++L+ K  +L G+ K    +++     L++
Sbjct: 1951 ISAPELDIECPEGKLKGS-KFKMPSLHMPDIDLNLKSPKLEGDLKDPKVDIKAPEINLEA 2009

Query: 293  ILPNSSTDEDNKT----KVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
               +              V +     L  +  G +            E E K    D+K 
Sbjct: 2010 PDVDMDGKVKGPKFKMPSVPKVSMPDLGLNVKGPKV-----------EGELKGPKIDMKG 2058

Query: 349  DDIQYSV 355
             ++  ++
Sbjct: 2059 PEVDVAI 2065


>gi|58578782|ref|YP_196994.1| hypothetical protein ERWE_CDS_01180 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417408|emb|CAI26612.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 878

 Score = 47.6 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/328 (12%), Positives = 105/328 (32%), Gaps = 36/328 (10%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI---- 56
           M++  L+  G    + L+     P FI+W  +       A+ ++ +   +   I +    
Sbjct: 1   MMK-FLVYFGSAILIFLLFLVVSPFFINWNSY------YASHVLKQIENISSDISVKGVN 53

Query: 57  ----HILPFPSVFFKDIRIDQKEDGSFE---SKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
                ++  P +   ++ ++   D S       IE L ++   L LL    +V+ + +D 
Sbjct: 54  NVTGSLV-LPKIVVNNLHVESGSDSSDYKSTILIERLELKISLLSLLLFSPKVYAVTVDG 112

Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII-DQESDQVYFLSDLNLQ 168
             +        +S++ +            +   +++   I    D+ S     +      
Sbjct: 113 LSMPLGSLVDILSSFKKGS--------FQIGTFNIRNSVINTHYDRTSFSSKPIYIKEGN 164

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
           I       +    +D  K S       + D  +     + +       +S          
Sbjct: 165 IKTINDTKVISGLLDIGKNSYTMTADVSLDKTQYRIAGSVSSELTKVTLSGVSYENKFDG 224

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
            I+        +       +         + + +   S ++  LS N K++D    ++ +
Sbjct: 225 VIVAKGSNFAQFINDLSETN--------KTSVFSFINSQEEFSLSSNIKLTDKRFELTDF 276

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLN 316
           K+ +   N   +    +  S + +   +
Sbjct: 277 KVATGSLNGLGNITCLSYSSCNIDIDFS 304


>gi|255039092|ref|YP_003089713.1| hypothetical protein Dfer_5355 [Dyadobacter fermentans DSM 18053]
 gi|254951848|gb|ACT96548.1| conserved hypothetical protein [Dyadobacter fermentans DSM 18053]
          Length = 393

 Score = 47.6 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 98/332 (29%), Gaps = 25/332 (7%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           ++L+G+     ++ +    + L            R    + G    +K  I + I+   +
Sbjct: 15  KILLGILIAIVLIRLALPYIVLHF--------ANRSLANMNGYYGHIK-DIDLAIIRG-A 64

Query: 64  VFFKDIRI----DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS- 118
                I I       +  +     + + +  E+  L  G I   ++   +P+L F     
Sbjct: 65  YQIDSIYINKEDSVTQKQTPFFASQTIDLSVEWKALFKGSIVG-ELVFQRPYLLFTKDKV 123

Query: 119 ---KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
              + V +    +  +D    + + +  ++GG I+  D  S     ++  NL + A+ L 
Sbjct: 124 EPQEVVKDSADFRQILDKFMPLSINRCELRGGAIQYRDNSSSPKVDIAMTNLNLLAQNLR 183

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID-L 234
                   S         T      +  F    N  A      +  +L       + D  
Sbjct: 184 NSYD---SSAVLPASVHATAEIYEGKLRFDAKLNPLADAPTFDMSAELNNTNLVKLNDFF 240

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                 +     +     VA    +         K+         D    + +   +++ 
Sbjct: 241 KAYAKIDVNDGRFGLYTEVAAKDEEFKGYVKPVIKNL--DVLGQEDRKDNLLQKLWEALA 298

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
             +    +NK K     +       +  ++  
Sbjct: 299 GGAGKLFENKNKDQVATKIPFQGRLDDPKTNM 330


>gi|220933633|ref|YP_002512532.1| hypothetical protein Tgr7_0447 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219994943|gb|ACL71545.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 1352

 Score = 47.2 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/347 (12%), Positives = 96/347 (27%), Gaps = 32/347 (9%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           MLRRVL   G L + +++      L       R     Q + +   ++ ++  ++  +L 
Sbjct: 1   MLRRVL--FGALIAFIMLATLLTVLLGTEPGTR-WVIHQGSALAPGELRIE-QVEGTLLR 56

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              V  + IR    ED S  + +E L +R     L    + +  + +    L+       
Sbjct: 57  --GVTLQGIRF---EDESASASLERLEIRINANALFLARLAITRLELHGLDLHTRPDPDP 111

Query: 121 VSNWFQR-KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF------ 173
                 +    + +   + L   H    R+   D +   ++ +                 
Sbjct: 112 APAEPFQIPEAIRLPLAIDLSPAHFTDLRLSFGDADPLVIHEIHLAASADRDAARIRTLT 171

Query: 174 -LNIISPLSIDSIKG---SVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF----- 224
              +   L + +  G       +    +   R          A+  +  ++I+       
Sbjct: 172 VDAVDFDLDLSARAGLALPYPMQAELAWR-VRLPEAAALGLDAEEASGRVRIEGDLERLT 230

Query: 225 ---PLAYPIIIDLFGNLFWNEKQPIYSGV--FSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
               +  P+ +   G        P +     +             ++ +  RL     + 
Sbjct: 231 LSHGIEAPLRLSGEGEFHTLLNTPAWDLAHHWEAFTWQVPEQGP-IAVEAGRLLSTGNLD 289

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
           D  + +         P    +   +       E  L  S        
Sbjct: 290 DHRLELHTTVTPLDYPAQRIELTGRGDAEHLAELSLAISGEVGRLGL 336


>gi|291326554|ref|ZP_06124982.2| paral putative protease [Providencia rettgeri DSM 1131]
 gi|291313536|gb|EFE53989.1| paral putative protease [Providencia rettgeri DSM 1131]
          Length = 1242

 Score = 47.2 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/294 (12%), Positives = 90/294 (30%), Gaps = 15/294 (5%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSFESKI 83
           L  +  ++R+D            + + G I+     F P +   D+ +  K   + +   
Sbjct: 8   LLPNIDNYRQDLIDYVEKKTDVSVQI-GKIEGAWQSFGPVLTLSDVVLQNK---TTDITA 63

Query: 84  EGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQRKSTMDMIHNVILEK 141
             +++  +    L S   R  D+   Q +++  +  S G S+  Q    ++ +     + 
Sbjct: 64  NTITVELDIWSSLFSLRWRFRDLTFYQLNVDHKVPFSLGDSSEGQSLDGIEELFLRQFDH 123

Query: 142 IHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197
             +K  ++  +     +       LS LN     R    +S  +I+   G +  +   + 
Sbjct: 124 FVLKESQLTFLTPSEQKTTLILPELSWLNDNDRHRAQGFVSLETINKQHGYLQVKLDVSD 183

Query: 198 DNKRSA---FKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSV 253
            N   +   F + A+       +S  ++           L   +     +          
Sbjct: 184 KNGVLSDGIFYLQADNIDMQPWLSRWLRDNTSLRDANFSLSSWVTLKNNRIDSGLIQLRQ 243

Query: 254 AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
                    L  + + + L    K        +  +L ++  N          V
Sbjct: 244 GEANWGTGELAQNLQVNDLLLRMKRQGNGWLFNIPELDTLKTNEFIWPRGSASV 297


>gi|326795041|ref|YP_004312861.1| membrane protein-like protein [Marinomonas mediterranea MMB-1]
 gi|326545805|gb|ADZ91025.1| membrane protein-like protein [Marinomonas mediterranea MMB-1]
          Length = 1271

 Score = 47.2 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 64/210 (30%), Gaps = 11/210 (5%)

Query: 5   VLIGLGFLFSVVLVGAFTVPLFIDW--TDFREDFERQATLIVGKKIAVKGGIKIHILP-F 61
           +L      F VVL         +      +R   E   + I+G  + ++      +    
Sbjct: 11  LLWWSAVGFVVVLAAIVVSVKQLLPLADRYRPQIESNISQIIGLPVQIE-TFGGSLNGID 69

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAE-FLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            S+    + I         + ++ +++  + F  LL+   +  ++ ++   L+    S G
Sbjct: 70  ISINISKLGISTVSG-EAVASVDQVALSFDTFKSLLTLSPQFRNVRVNGLSLHL-KESHG 127

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN--IIS 178
                   S          E   V    I  +  +   +   S ++L           I 
Sbjct: 128 KIGLVGFNSNASPDSVSDPE--VVAERVIDYLSSQKQWIINDSKISLTSENFDSQMLRIP 185

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208
              I       + +     +++ +  K+ A
Sbjct: 186 TFVIREYADRTMGQAEVFVNDQITPIKLKA 215


>gi|58700127|ref|ZP_00374646.1| conserved hypothetical protein [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58533357|gb|EAL57837.1| conserved hypothetical protein [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 223

 Score = 47.2 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 49/140 (35%), Gaps = 15/140 (10%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--- 78
               F DW+ +R+   ++       K+ + G +++ ++  P +   ++ +   E+     
Sbjct: 87  VAATFKDWSGYRQYIIKELEKTYDAKVHIGGKVEVSLI-TPKLTIYNVYVQYNENKEQKL 145

Query: 79  -FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV 137
                +  + +R  FL L    ++   + +     N         N     +T    + V
Sbjct: 146 SDLISVRKIEIRPSFLSLFLFSLQPKSITLFGMKSN-------KENLINIINTKASGNTV 198

Query: 138 ILEKIHVKGGRIKIIDQESD 157
            +    +K  ++      +D
Sbjct: 199 DI---VIKDSQVSFKSDFAD 215


>gi|58040440|ref|YP_192404.1| hypothetical protein GOX2012 [Gluconobacter oxydans 621H]
 gi|58002854|gb|AAW61748.1| Hypothetical protein GOX2012 [Gluconobacter oxydans 621H]
          Length = 1381

 Score = 47.2 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/318 (12%), Positives = 97/318 (30%), Gaps = 32/318 (10%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLF-----IDWTDFREDFERQATLIVGKKIAVKGGIKIH 57
           RR+L+ +     +V VG   V +      I+ +  +   ER+   + G  + + G   + 
Sbjct: 4   RRILLRVAAGLVIVPVGLVAVAVTGVLVGINISPGQRLIERKIGPLTGDMVEISG---LS 60

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL--NFY 115
                 +    + I   +      +++   +R   L LL  + ++ ++   +  +     
Sbjct: 61  GFLPHHLAVAKLLIKDTKG--PWIELDNADLRWSPLSLLHLDAKITNLSASRVAVLRKMV 118

Query: 116 LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
              +         ST     ++ ++   +  GR++I     D     +  +L   A   +
Sbjct: 119 SEPEKTPAKPTTTSTAPSKLHLRVDLASLHVGRLEI---GPDYTVTPTAFSLDGHAHIHS 175

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI----- 230
           I   L   ++K   + +             +T N     K I++ I+             
Sbjct: 176 IAPFLDGVTMKTLPVMDVALALKRLDQPGSLTLNVQTPKKRIAVGIRFQEGDNGFATTLG 235

Query: 231 ------IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                  +DL  NL       +        G      +   +       G+  +      
Sbjct: 236 QMPQLDPLDLHLNLNGPRTASLLDFGL---GAGPIKASATGTMNLLTRVGDLHV---KAN 289

Query: 285 ISRYKLQSILPNSSTDED 302
                L+  +  ++   D
Sbjct: 290 APSMTLRPGIAWNAIALD 307


>gi|58616841|ref|YP_196040.1| hypothetical protein ERGA_CDS_01140 [Ehrlichia ruminantium str.
           Gardel]
 gi|58416453|emb|CAI27566.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
          Length = 878

 Score = 46.8 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/327 (12%), Positives = 105/327 (32%), Gaps = 34/327 (10%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIH--- 57
           M++  L+  G    + L+     P FI+W  +       A+ ++ +   +   I +    
Sbjct: 1   MMK-FLVYFGSAILIFLLFLVVSPFFINWNSY------YASHVLKQIENISSDISVKGVN 53

Query: 58  ----ILPFPSVFFKDIRIDQKEDGSFE---SKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110
                L  P +   +++++   D S       IE L ++   L LL    +V+ + +D  
Sbjct: 54  NVTGSLVLPKIVVNNLQVESGSDSSDYKSTILIERLELKISLLSLLLFSPKVYAVTVDGL 113

Query: 111 HLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII-DQESDQVYFLSDLNLQI 169
            +        +S++ +            +   +++   I    D+ S     +      I
Sbjct: 114 SMPLGSLVDILSSFKKGS--------FQIGTFNIRNSVINTHYDRTSFSSKPIYIKEGNI 165

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
                  +    +D  K S       + D  +     + +       +S           
Sbjct: 166 KTINDTKVISGLLDIGKNSYTMTADVSLDKTQYRIAGSVSSELTKVTLSGVSYENKFDGV 225

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
           I+        +       +         + + +   S ++  LS N K++D    ++ +K
Sbjct: 226 IVAKGSNFAQFINDLSETN--------KTSVFSFINSQEEFSLSSNIKLTDKRFELTDFK 277

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLN 316
           + +   N   +    +  S + +   +
Sbjct: 278 VATGSLNGLGNITCLSYSSCNIDIDFS 304


>gi|254496586|ref|ZP_05109454.1| transmembrane protein [Legionella drancourtii LLAP12]
 gi|254354210|gb|EET12877.1| transmembrane protein [Legionella drancourtii LLAP12]
          Length = 1308

 Score = 46.8 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/284 (12%), Positives = 83/284 (29%), Gaps = 17/284 (5%)

Query: 31  DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRA 90
            ++ D E+  +L++G+ + ++          P +  K + +   +D     ++  L +  
Sbjct: 17  QYKGDVEQHLSLLLGQPVTIQTMETGWYWFQPVLKLKQVTLG--DDSKNVFRLNKLLVGI 74

Query: 91  EFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRI 149
                L + +I+   +YID  HL      +G        +      ++  EK   K   I
Sbjct: 75  NLFKSLWNWQIKSGVLYIDDMHLTL-REKQGHWTIDGISTDTINAEDMTPEKS--KQILI 131

Query: 150 KIIDQESDQVYFLSD-LNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208
            +  QE   +  +S                 +SI +  G    +G    +   S      
Sbjct: 132 WLSQQERLIIKRVSAHFYFSDGGIIPVDGLNVSILNNGGHYKLKGNARLEQTNST-DFQL 190

Query: 209 NFPA-------KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLL 261
                      ++           +       LF     + +         +      + 
Sbjct: 191 LGDGYFDADHFEDIDGKFYFSAQNVMPAQWQSLFPKATEHLEGGKGDIQLWMDIHQGTIA 250

Query: 262 NLELSAKKSRLSGNFKISDGNVRISRY--KLQSILPNSSTDEDN 303
           +++   K  RL+     +  +  I  +   L     ++      
Sbjct: 251 SVQAQIKLERLAWRLLNNQHSQLIQSFFANLSWKPNSTGWQLHG 294


>gi|300776120|ref|ZP_07085979.1| clan AA aspartic protease [Chryseobacterium gleum ATCC 35910]
 gi|300505253|gb|EFK36392.1| clan AA aspartic protease [Chryseobacterium gleum ATCC 35910]
          Length = 1675

 Score = 46.8 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/277 (11%), Positives = 87/277 (31%), Gaps = 17/277 (6%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +LRR+ I    +  ++ +   ++ L       ++         +   ++++   +++I  
Sbjct: 10  LLRRIAITFISILVLLTLLILSLRLPAVQNFIKDKLIVYLEKKIKTPVSLE---RVYIGF 66

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             S+  +++ +   +D      ++ L +    L LL+    +  + ++    N      G
Sbjct: 67  PNSLVMENLYLKG-QDVDTLLAVKKLDVGLHMLKLLNSTADITSVNMEGARANVVRKPDG 125

Query: 121 VSNWF---------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA 171
             N+           ++ +      + L+KI++K   +   DQ+S     L   +     
Sbjct: 126 KFNFDYIIDAFATSDKEESPSKPFIISLDKINLKDVGVTFNDQQSKNDIQLYFKSFDTRV 185

Query: 172 RFLNIISPLSIDSIKGSVIAEG-TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
           +  ++      +     +  +G                     +     K     L    
Sbjct: 186 KTFDLN---KNNYAVNDINLDGLKLKLKQDLVEEVAKKVEKKVDFLNEKKPMNIGLRGIK 242

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA 267
           +     +      +     +F         L+LE +A
Sbjct: 243 LTHFDIDYGDENTKTFAKVIFKELSTKVNKLDLENNA 279


>gi|120608812|ref|YP_968490.1| hypothetical protein Aave_0103 [Acidovorax citrulli AAC00-1]
 gi|120587276|gb|ABM30716.1| conserved hypothetical protein [Acidovorax citrulli AAC00-1]
          Length = 457

 Score = 46.8 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/279 (11%), Positives = 90/279 (32%), Gaps = 22/279 (7%)

Query: 40  ATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE 99
           A  ++G  + V   ++ H+LP P V    +  +Q+         + +   A +  LL   
Sbjct: 63  AGDLLGVPVVVD-RLEWHLLPAPRVVLHGVHTEQEAP----VSADRIVADARWSDLLRLR 117

Query: 100 IRVFDMYIDQ---PHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR---IKIID 153
           + +  + ++    P L+              +          L ++ V+      ++ I 
Sbjct: 118 LALARLRLEGAAIPQLSLSQFK----VRDAEEDGPAGFGPFTLAEVPVEHAEWQGVRWIG 173

Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213
           ++   + +   ++   + R +  +      S    +  E  G     R    +TA    +
Sbjct: 174 RQGRDLAYGGSVDFGPAWRPVRGLLEREGASPPTRLAIEREGE---DRWRADVTAGGRTE 230

Query: 214 NKAISLKIQLFPLAYPIIIDLFG---NLFWNEKQPIYSGVFSVAG-DFSKLLNLELSAKK 269
              + L+           +D  G       +  +         +G         + +A  
Sbjct: 231 RGELRLQESGERYRVTGSLDFSGVDVVGLMDAFERRSIVSGRASGHTDLIAEGDDPAAAM 290

Query: 270 SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVS 308
             L      +    ++  + L++ + ++ +D+   T++ 
Sbjct: 291 RALQTRTSFTVARAKLLTFDLEAAIRSAGSDKGGTTQLD 329


>gi|307826261|ref|ZP_07656470.1| membrane protein-like protein [Methylobacter tundripaludum SV96]
 gi|307732723|gb|EFO03591.1| membrane protein-like protein [Methylobacter tundripaludum SV96]
          Length = 1266

 Score = 46.8 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/376 (10%), Positives = 86/376 (22%), Gaps = 47/376 (12%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-LPFPSVF 65
           +    L +  +       L      ++ D     + +VG  + + G +   +    P + 
Sbjct: 12  LIFWSLIAAAIGLTGVRLLLSGIEHYKSDLATSISALVGTPVTI-GRLGAKMRGFNPELI 70

Query: 66  FKDIRIDQ--------------------------KEDGSFESKIEGLSMRAEFLPLLSGE 99
            KDI +                              +     +   + +    L +L   
Sbjct: 71  LKDIAVSSQAAPVHPPSGATQANPLQADLSSAAPTGNEEPAIQFNEIRLGINLLDMLVRR 130

Query: 100 --IRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI-HNVILEKIHVKGGRIKIIDQES 156
             +    + +    L       G       K++       +   K  V    I   D+ S
Sbjct: 131 DLLSSSWVTLVGAKLAIKRQQDGSIVIVGLKASGGQPQWLLQGGKYEVLQSEIIWQDEAS 190

Query: 157 DQVYFL---SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213
                L    DL +        +   + +    G+     + +F                
Sbjct: 191 RARPLLFNGVDLAISNQGEHHRLNMLMKLPKRVGN-ALRVSMDFKGNVFEPSTIEGRVYI 249

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS 273
                L  +L  L    + D   ++          G +  A   S  +  ++        
Sbjct: 250 EGQAVLLPELAALGQASVGD-RIHINAGTGDFKIWGDWRQAQLTSMDVAAQIQQMTLVRQ 308

Query: 274 GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN-ETD 332
              + S   ++  R              D          N  +                 
Sbjct: 309 DKREFSVKQLKT-RLHWGLNDAGKQWQLD---------VNDFSLETQDNPKDVVKKWPAA 358

Query: 333 FFEEEEKKNKNDDLKK 348
            F    ++  +  L K
Sbjct: 359 VFSVSGQRRDDAALHK 374


>gi|90020024|ref|YP_525851.1| hypothetical protein Sde_0375 [Saccharophagus degradans 2-40]
 gi|89949624|gb|ABD79639.1| hypothetical protein Sde_0375 [Saccharophagus degradans 2-40]
          Length = 382

 Score = 46.8 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 45/372 (12%), Positives = 111/372 (29%), Gaps = 43/372 (11%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           +V I    LF++++      P  +     +    +      G   +++  I +H+    +
Sbjct: 11  KVFIAACILFTLLVALRMLAPTIV-----KNIVNQSLDNAPGIAGSIQ-DIDLHLYRG-A 63

Query: 64  VFFKDIRIDQKED--GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
              + I +   ++        I  L +   +  L+ G++   ++   QP   F  + +  
Sbjct: 64  YQIEGIELRTVKNNIEHPFVTISELDISIFWTKLIRGKVVT-ELVFKQPSFTFADTKEEQ 122

Query: 122 S-------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQES----DQVYFLSDLNLQIS 170
           +       N        + +    ++++ V  G      + +       + +SD+N  + 
Sbjct: 123 TKKYEAAANKSTWLGISEQLVPFDIDRLEVIDGHFTFEGKSNTLNQKGAFQVSDINGVVV 182

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGN-----FDNKRSAFKITANFPAKNKAISLKIQLFP 225
                       +  K +    GT       +   +   + + +  +K     +   +  
Sbjct: 183 GITSPSQYDTENNKSKNTTSTRGTLTGYGMVYGESKVTAEGSFDPFSKKPMFDVDAHIDD 242

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
           +       L   +       + +G F  A         EL A    L+G  K+    + +
Sbjct: 243 IQAK---HLDALIKIYTPFDVEAGSFMAAT--------ELKADMGELTGYLKVGADELDV 291

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
             +K Q I  +     +            +      +    DL  T    E    N    
Sbjct: 292 FSWK-QDIEIDGDNPFEALADALIGGIANIL-----SNRETDLVATQIPIEGSLNNPETS 345

Query: 346 LKKDDIQYSVNK 357
           + +  +    N 
Sbjct: 346 VIESFLSLLNNA 357


>gi|270159561|ref|ZP_06188217.1| conserved hypothetical protein [Legionella longbeachae D-4968]
 gi|269987900|gb|EEZ94155.1| conserved hypothetical protein [Legionella longbeachae D-4968]
          Length = 1313

 Score = 46.4 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 88/298 (29%), Gaps = 27/298 (9%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67
           L      + V +        W   ++ + E+  +L++G+ + ++          P +   
Sbjct: 3   LAVFIIFMAVFSSIFRALTPWAKEYKGEIEQHLSLLLGQPVTIQTIETGWYWFHPVLKLN 62

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLSSKGVS---- 122
            + +   +D +    +  L +       L + +I+   +YID  HLN             
Sbjct: 63  QVTLG--DDSNKNFHVNKLLVGINLFKSLWNWQIQPGVLYIDDMHLNL-REKDAHWTIDG 119

Query: 123 --------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                   +    K+   +I     E++ +K         +   +  +  LN+ ++    
Sbjct: 120 ITTNALNSDMTPEKTKQILIWLSQQERLIIKHVSAYFYFSDGG-LIPVDGLNVSVANSGG 178

Query: 175 NIISPLS---IDSIKGSVIAEGTGNFDNKRS-AFKITANFPAKNKAISLKIQLFPLAYPI 230
           +           +        G G FD+      K    F AKN   +    LFP A   
Sbjct: 179 HYKFKGGARLAQTNSTDFQLLGDGYFDSDHFEEIKGRFYFSAKNIVPAQWQSLFPQATEH 238

Query: 231 IIDLFGNLFWNEKQP-----IYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
           +    GN+                         +LL  + S        N      NV
Sbjct: 239 LEGGKGNIALWVDIRHGSITSVQAQVDFKRLAWRLLRNQQSQLVQSFFANLSWKPDNV 296


>gi|288959224|ref|YP_003449565.1| hypothetical protein AZL_023830 [Azospirillum sp. B510]
 gi|288911532|dbj|BAI73021.1| hypothetical protein AZL_023830 [Azospirillum sp. B510]
          Length = 1193

 Score = 46.4 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 86/303 (28%), Gaps = 51/303 (16%)

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +  + +R    +     + +  + +      LL G +    + + +P L+    + G
Sbjct: 21  RLDLRARRVRALNADG-VELAAVPEMGIGFSIPALLRGTLSPTRIDLVRPRLSVLRRADG 79

Query: 121 VSNWFQRKSTMDMIHNVI-------------------------LEKIHVKGGRIKIIDQE 155
              +  R  T                                 L ++ V G  +++ ++ 
Sbjct: 80  SLAFDVRAETEPDRKPDDGAPDLMDEALESLRRPPDIDRPLGLLRRLSVAGADLRVENRM 139

Query: 156 SDQVYFLSDLNLQISARFLNIISPLSID----------------SIKGSVIAEGTGNFDN 199
               +  +  ++ ++           +                 +   +V A G  N  +
Sbjct: 140 LGLSWHATRADIVLTRDAQGAQGRARVTLDLGTAGGGTAGGTGAARAVTVAATGHYNIAD 199

Query: 200 KRSAFKITANFPAKNKAISLKIQLFPLA---YPIIIDLFGNLFWNEKQPIYSGVFSVAGD 256
             +   ++ +         +   L PL+    P+   +   L    +        +  G 
Sbjct: 200 TTTDLSLSVDGLEPAALAEIGPALAPLSAIRLPLSGTVRTRLDSRFQPLTADLALNSGGG 259

Query: 257 FSKLLNL------ELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQD 310
               + L       +S +   L G   ++   +RI+   L++  P+ S       +    
Sbjct: 260 GGGTIALPELWPRPVSVQSLALRGTLDVAGRRLRIADLALKAESPDDSGPLALNGQGELG 319

Query: 311 EEN 313
           E N
Sbjct: 320 ETN 322


>gi|167035088|ref|YP_001670319.1| hypothetical protein PputGB1_4093 [Pseudomonas putida GB-1]
 gi|166861576|gb|ABY99983.1| conserved hypothetical protein [Pseudomonas putida GB-1]
          Length = 357

 Score = 46.4 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/361 (10%), Positives = 99/361 (27%), Gaps = 20/361 (5%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R  L+GLG L  +++     +P  +     R+    +   +   +  V   + +      
Sbjct: 6   RWPLLGLGSLIVLLVALHLALPYLV-----RDYLNDKLADMGDYRGQVA-DVDLAWWRG- 58

Query: 63  SVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           +     ++I +              + +   +  L   +  V ++   +P LNF      
Sbjct: 59  AYQINGLKIVKTSGKVPVPFLDAPLIDLSVSWRSLWYDKAVVAEVTFVRPELNFVDGGSK 118

Query: 121 VSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
            ++   + +        +  + L ++ +  G +   +  S     L    L  + R L  
Sbjct: 119 QASQTGQGTDWRQQLEKLLPITLNEVRIDNGVLTFRNFNSKPPVDLKATQLNANIRNLTN 178

Query: 177 ISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
           +              EGT       +   + T +  +       +++   +    + D  
Sbjct: 179 VRDKKGRRDAS---FEGTALIAGDAKVESRATFDPFSDFDDFKFRLRATGIELRKLNDFA 235

Query: 236 ---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
              G   +N                       L            + + +    R   ++
Sbjct: 236 SAYGKFDFNAGHGDVVIEAQAENGRLNGYIKPLLRDVDVFDWQQDVEEKDKGFFRSVWEA 295

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
           ++  + T   N+ K        L+ S +  +                +  N   ++    
Sbjct: 296 LVGATETVLKNQPKNQFATRVELSGSVHKQDISAFEAFLQILRNGFIQAFNARYERGAPD 355

Query: 353 Y 353
            
Sbjct: 356 A 356


>gi|218708194|ref|YP_002415815.1| hypothetical protein VS_0130 [Vibrio splendidus LGP32]
 gi|218321213|emb|CAV17163.1| hypothetical protein VS_0130 [Vibrio splendidus LGP32]
          Length = 617

 Score = 46.4 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/358 (9%), Positives = 95/358 (26%), Gaps = 27/358 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFER-QATLIVGKKIAVKGGIKIHILP 60
           +++V +  G   ++ +     + L +    +R D         + +++ ++    +    
Sbjct: 1   MKKVFMVFGIALAIAVATIAALLLSLQT-QYRTDITNFFIKHAIEQRVLIE---DVEYQA 56

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-------- 112
              +    I   Q E  +    I+ + +      +L  ++ +  + I    L        
Sbjct: 57  PYHITLMGITQSQPEKQTP-LYIDKIDLWFSSDSILETKLVLDSVLISGLQLEANDLDTV 115

Query: 113 -NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY---FLSDLNLQ 168
            + +             +      N     I ++       +  S   Y    LS   L 
Sbjct: 116 TSVFTQPNLKLRQLAINNLDFSTPNFNARGIDLQISDPTWNNDNSLLPYGKTQLSASQLY 175

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
             +   + +          S +   + ++   + + +        +        L     
Sbjct: 176 WQSEAFDNLLIDLDLKPSDSTLYGASFDWRGAKISGQAEQYQQDWSLVNVTVDGLRLNQK 235

Query: 229 PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRY 288
                L         Q  +     +     +  +  L+A        F  S  N+++   
Sbjct: 236 QTQSLLSKEWDVAGIQINHINSLDILRSDVEWQDGHLAA--------FDASLENIQLPFE 287

Query: 289 KLQSILPNSSTDEDN-KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
             +      S   +          E  +  + +  + + +   T F +   + N    
Sbjct: 288 LWKQQKAMFSLQAEGVTIDEDMFIEPSIKLNLDPNQILIEDFYTQFLQGTVQLNGKVT 345


>gi|78777839|ref|YP_394154.1| hypothetical protein Suden_1642 [Sulfurimonas denitrificans DSM
           1251]
 gi|78498379|gb|ABB44919.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM
           1251]
          Length = 665

 Score = 46.4 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 43/362 (11%), Positives = 98/362 (27%), Gaps = 37/362 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +      +   V+         +     +   E +    +     ++          
Sbjct: 1   MKYLAWISAIILFFVVSVYVVAFTPVGNNLIKPIIEAKIQERIKVTTKME---------N 51

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            S+   D +I  + D     K EG+          + EI   ++   +P     +   G 
Sbjct: 52  FSLSMSDFKITLELDKGNFIKAEGIYSIFAKSFDFNYEIDFKNLKTLKPL--LEMPLNGA 109

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                          +         G+  +   ++     LSDLN        +II+ + 
Sbjct: 110 FKTDGVVRGDLAFMKI--------DGKSDVAQSDTSYHVELSDLN------PTSIIANMK 155

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAK---NKAISLKIQLFPLAYPIIIDLFGNL 238
              +   +       +        I          +  + L +    +  P  +    N+
Sbjct: 156 NAKLSLLLYLGAKNPYAAADVNLDINLKSITPHKLDGDVKL-VTKNGVINPEFMKSDFNV 214

Query: 239 FWNEKQPIYSGVFSVAGDFSKLL-NLELSAKKSRLSGNFK----ISDGNVRISRYKLQSI 293
              +     S    + GD      +L  +  K   SGN       +D    +    L+ +
Sbjct: 215 TVPKSSFDMSLDAKLKGDDLVYSCDLTSNLFKINSSGNLTPEPFKADLKYALDVENLEVL 274

Query: 294 LPNSSTDEDNKTKVS---QDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350
            P ++ D     K++     + N L    N   +          ++    +    +   D
Sbjct: 275 KPITNADIRGALKLNGTLSGDRNRLLVRANSDVAASQTTLEAVLKDFTPISLRAKITDLD 334

Query: 351 IQ 352
           I 
Sbjct: 335 IA 336


>gi|42523088|ref|NP_968468.1| hypothetical protein Bd1583 [Bdellovibrio bacteriovorus HD100]
 gi|39575293|emb|CAE79461.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio
           bacteriovorus HD100]
          Length = 321

 Score = 46.4 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 60/180 (33%), Gaps = 13/180 (7%)

Query: 3   RRVLIGL----GFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGG-IKIH 57
           R++L  +    G +F +V+       +   + D  +    Q + +    + V+   +K+ 
Sbjct: 5   RQLLKLIRESKGKIFVMVVSALVFAFMLFPFDDLSDLISSQVSRLSNNSVYVQFEKLKMS 64

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS----GEIRVFDMYIDQPHLN 113
           + P P V    + I+     +       L +      L+     G +    +      ++
Sbjct: 65  LFPQPGVKMDQVYIESI--RTPAISATELVITPSVRGLIQQKPYGHVSAKGLLKGDVDVH 122

Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVILEKIH-VKGGRIKIIDQESDQVYFLSDLNLQISAR 172
               SK   N  +R         + L  +  +    I +  Q + +   L+DL  Q    
Sbjct: 123 VGKGSK-TENGAERHKIEVSAKKISLHDLREMANLPILLKGQLNLESTALADLTFQEQPD 181


>gi|239993730|ref|ZP_04714254.1| hypothetical protein AmacA2_04511 [Alteromonas macleodii ATCC
           27126]
          Length = 370

 Score = 46.4 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/360 (10%), Positives = 106/360 (29%), Gaps = 27/360 (7%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           +RV   L  L   ++     +P                +        V G + + +    
Sbjct: 6   KRVCYVLIALLLTLIAIRLYLPY-----AAASYINTTLSQSKAYNGRV-GDVDLMLWRG- 58

Query: 63  SVFFKDIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF------ 114
           +   + + +     +      K + +     +  L  G      + ++ P +NF      
Sbjct: 59  AYSLEHVLLYKANGQVDRPLFKADYVEFTLSWSQLFKGAAVG-KVIVNSPEINFVDGNTE 117

Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS--DLNLQISAR 172
             S  G    +      D +  + ++K+ +  G++   + ++     ++  D+ L+++  
Sbjct: 118 ERSQSGKDENWLS--IADQLFPLRIDKLTINQGKVAFHNPDTSPAIDIALHDIQLEVNNL 175

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-PII 231
             +       DS   +  A+G         +     N         + IQ   +      
Sbjct: 176 VNSDNLS---DSRVATAKAQGQTAQQGT-ISLNAKLNPATTAPTFDVDIQADNVGLVNFK 231

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS--RLSGNFKISDGNVRISRYK 289
             L     ++ +    +    VA +  K+         +    S    I           
Sbjct: 232 NLLDTYAPFDLEAGTLTLAAEVASNEGKVKGYIKPILHNVEVFSWKGDIERDGDGFIEGS 291

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349
           +++I    +   +N+++        +    +  ++      T   +    +  N D++K 
Sbjct: 292 IEAISAFVTELFENQSEDQIATRIPVEGDLSSPDTQTWEAFTAILKNAFIEAFNGDVEKS 351


>gi|224025210|ref|ZP_03643576.1| hypothetical protein BACCOPRO_01944 [Bacteroides coprophilus DSM
           18228]
 gi|224018446|gb|EEF76444.1| hypothetical protein BACCOPRO_01944 [Bacteroides coprophilus DSM
           18228]
          Length = 643

 Score = 46.0 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/325 (10%), Positives = 85/325 (26%), Gaps = 20/325 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQA---TLIVGKKIAVKGGIKIHI 58
           ++R LIG G    VVL  +  +             ER+        G  I       +  
Sbjct: 1   MKRKLIGAGGGLLVVLGLSLFLLWGFRNPVINSMAERKILAMKERYGLDIHYD---YLEF 57

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN-FYLS 117
                + F  + +   E       I    +      LL G + +  + ++QP L      
Sbjct: 58  TKTGRILFGGLSVV-PEQRDTLLTIHSAEITPGLWQLLRGNLEIRRISMEQPELRFVKKG 116

Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
           ++   ++               +K        +   +    +  +  L L    +   + 
Sbjct: 117 TQANYDFMFLGDRTSRPETSRPDK-----SSAEYDRRAGLLLKTIFRL-LPSEGKLTRLR 170

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG- 236
                D+   S+         ++     I      K +      ++ P  + + + +   
Sbjct: 171 ISEKKDNNSVSLYIP-EFRIKDRHFQSHIQFVEDGKEQHWQTSGEIDPSEHLLSLHIQAP 229

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN---FKISDGNVRISRYKLQSI 293
           ++     +                +  + S  + +         +    +      L   
Sbjct: 230 DVAVPYLKRRLGAKIHFDELMLSFIQKDGSPMQLQGKAEVRGLSLFHHRLSPEVINLNHG 289

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFS 318
             +   +      +  D  + + F+
Sbjct: 290 EVDFHLNI-GSQSIELDSCSTVRFN 313


>gi|239996503|ref|ZP_04717027.1| hypothetical protein AmacA2_18801 [Alteromonas macleodii ATCC
           27126]
          Length = 773

 Score = 46.0 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 46/396 (11%), Positives = 108/396 (27%), Gaps = 31/396 (7%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M +R L  +     ++LV  + V   I          +       + +++     I    
Sbjct: 1   MRKRTLSAILLSPVLILVALYAV--LISP--LGGPTVKLLANTFVENLSID---AIDGGF 53

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
             ++   ++  +  +        +   +   +  L    + V ++ ++   L    ++  
Sbjct: 54  ADTLEVHNVEWENPQWK---VSAQYTYIDITWRCLFEPRVCVNEVTLENATLTQRSNAPD 110

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKG------------GRIKIIDQESDQVYFLSDLNLQ 168
            S+       +++   + +  + +                +++ D E +    L  +  +
Sbjct: 111 SSDDAPAGGQIELPLPIDVGYLALTNIKLALLTTTVEIDELELTDFEGNSDLILDSIAAK 170

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA- 227
                L      +  S      A  T +        +  +   A   + SL   +  L  
Sbjct: 171 GVRIALLNQDEAASSSPAAMTNASETNSEQPAPKKEQAPSADSALPTSYSLSYDVPLLPN 230

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
               I L    F  E   I  G       F  LL          +     +      +  
Sbjct: 231 IATPIPLSLGTFLVEDLHIIQGESKQHISFISLLEAHFKGSDVAIE-EMTVVHEQGEVKG 289

Query: 288 YKLQSILPNSSTDEDNKTKVSQDEEN-LLNFSENGA--ESMHDLNETDFFEEEEKKNKND 344
               ++  N   +     K    +    L+ +  GA  +    +              N 
Sbjct: 290 KASATLDGNFPLNVAINAKTKLGDTPQELSVAAAGALDDLTLSVVAKGAVTANANLMANI 349

Query: 345 DLKKDDIQYSVN----KKEEKDNSHDKENQENFSGD 376
                 I+++ N         +N+  KE Q   SG 
Sbjct: 350 LDSNLPIEFTANWQEQAIPTVENTTLKEGQLTLSGT 385


>gi|149369919|ref|ZP_01889770.1| hypothetical protein SCB49_02559 [unidentified eubacterium SCB49]
 gi|149356410|gb|EDM44966.1| hypothetical protein SCB49_02559 [unidentified eubacterium SCB49]
          Length = 523

 Score = 46.0 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 42/350 (12%), Positives = 113/350 (32%), Gaps = 28/350 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAV-KGGIKIHILPF 61
           + + I LG         AF V +F   T  +          +   I   +G I ++    
Sbjct: 6   KLIFITLGIFLI-----AFAVTVFYVNTTVKSKINHFLENRLPPHITSTQGKIDVNTFDG 60

Query: 62  PSVFFKDIRIDQKEDGS----FESKIEGLSM-RAEFLPL-LSGEIRVFDMYIDQPHLNFY 115
            +V   D+ +  K            ++ L +    +    ++ +I+V D+ +  P++ +Y
Sbjct: 61  -TVTLSDVLVKIKNKNDTLTHTFVTLKKLVVEDVGYWDYIINKKIKVEDIKLKDPNITYY 119

Query: 116 LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
                +         + +    ++++++++     II +E D ++  +      +     
Sbjct: 120 KDKVALKKDTLISPPIKLFKPFLIDELNLENATFTIIQKEKDSLFLQTK-----NTNIKI 174

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
               +S ++++  +  + + ++     +  +  +        SL I+   ++     D+ 
Sbjct: 175 DNIEISKETLRNKIPVKYS-SYKTTADSIFVKISPYENVTVNSLNIKNNKVSLQ---DIN 230

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
               ++ K                   +++S        +F      + I    +    P
Sbjct: 231 LKTKYSRKALSKILTKEQDHFNVHFNEIQIS------EVDFGFKKNRLFIKSPSIIIDTP 284

Query: 296 NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDD 345
           N+S   D         +NL +     A     +N+      E    +   
Sbjct: 285 NASIYRDKLVADDPTIKNLYSKMLRKATIDLTINKVAINNGEISYTERVK 334


>gi|144898142|emb|CAM75006.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 291

 Score = 46.0 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/263 (7%), Positives = 64/263 (24%), Gaps = 40/263 (15%)

Query: 27  IDWTDFREDFERQATLIVGKKIAVKGGIKIHI----------LPFPSVFFKDIRIDQKED 76
           +         E             +GG+ + +               +    +     ++
Sbjct: 36  VALDFLTPYIEEALAAP-------EGGVSVRLDTTVLALGANNRTLEIRALGVNAYVGDN 88

Query: 77  GSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN 136
               + +  +++      LL+G++    + + +P L+   S  G           +    
Sbjct: 89  ARPIASVPEIALTLSGQALLNGQLAPKSITLLRPRLHLVRSVDGRFQMDIGAVGAETPTP 148

Query: 137 V-----------------------ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
                                    L++  +    + + D   +  +   D ++++    
Sbjct: 149 PSGNAAESLLAALVGEPDPTKPGRSLQRAAIIDADLTVDDLYLNTTWQAKDADVELHRVE 208

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
             +     ++   G            ++   K+ A         +   +L      +   
Sbjct: 209 GGLDGSAHLEFDLGGETGIADATVTYRKDGDKLGAEIEVSGIRPAALARLGGPLTQLQAL 268

Query: 234 LFGNLFWNEKQPIYSGVFSVAGD 256
                     +   SG   + G 
Sbjct: 269 DLPLAGMVRAKGDVSGKVEIRGV 291


>gi|308805130|ref|XP_003079877.1| unnamed protein product [Ostreococcus tauri]
 gi|116058334|emb|CAL53523.1| unnamed protein product [Ostreococcus tauri]
          Length = 2061

 Score = 46.0 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/149 (8%), Positives = 44/149 (29%), Gaps = 9/149 (6%)

Query: 2   LRRVLIGLGFLFSV--VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           L++ +     L +V   +      P  +            A+ +VG+ + V     +  +
Sbjct: 147 LKQSVKWALALTAVMSAVFHYIVGPAVVSPRL--PYIGEMASSVVGRPVRVGRCKSLSFM 204

Query: 60  PFPS----VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
                   +    + +   E      +++ + +  + L  +     V ++ ++  + +  
Sbjct: 205 GALGFGKFLEVGPVVLGPSETEKSIVEVDSVKISYDVLRSILRRKLVTEVNLEGVNASLR 264

Query: 116 LSSKGVSNWFQRKSTMDMI-HNVILEKIH 143
                    +   +        + L  I 
Sbjct: 265 QGENNSWFGYPEDTNPLSSRPTLQLGSIS 293


>gi|27364839|ref|NP_760367.1| hypothetical protein VV1_1454 [Vibrio vulnificus CMCP6]
 gi|27360984|gb|AAO09894.1| Possible exported protein [Vibrio vulnificus CMCP6]
          Length = 1295

 Score = 46.0 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 86/303 (28%), Gaps = 29/303 (9%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89
             F+++ +       G  +++           PSV  +        +      ++ + + 
Sbjct: 38  NQFQDEIKTWVKQGTGLDVSISSVSGSWRNSHPSVALQGFEAFLPGEKKVNISVDEVHIE 97

Query: 90  AEFL-PLLSGEIRVFDMYIDQPHLNFY----LSSKGVSNWFQRKSTMDMIHNV------- 137
            + L  +L  +  V ++ +    L+      ++++G         + +  + +       
Sbjct: 98  FDLLESILRLQPVVANLNMSGLALDIRSIELVAAEGPPTREASSESQESSNLIKQLDNLL 157

Query: 138 --ILEKIHVKGGRIKIIDQES-DQVYFLSDLNLQISARFLNIISPLS-----IDSIKGSV 189
              LE+  V   +I        ++   +  L  +           +S     ++++  S 
Sbjct: 158 LRQLEEFSVTQSKIWYQSVSGENRRLDIDRLRWRNQGAHHLAEGVVSVAGTNLNALLVSA 217

Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                G+  +    F + A   A  + ++  ++         I L   L     QP Y+ 
Sbjct: 218 NFVDHGSLLDVSGEFYVNAEEIAVTQWLTRYVKKETGIDSGKISLKSWLTLQHSQPRYAF 277

Query: 250 ------VFSVAGDFSKLLNLELSAKKSRLSG---NFKISDGNVRISRYKLQSILPNSSTD 300
                   S   +    L LE    K    G           +R    +   +       
Sbjct: 278 VELLPSELSWTENGQHELTLESGILKLSPDGEGWKVSGHSLTLRTDEIEWPQLDIAFDWQ 337

Query: 301 EDN 303
              
Sbjct: 338 PQG 340


>gi|37681113|ref|NP_935722.1| hypothetical protein VV2929 [Vibrio vulnificus YJ016]
 gi|37199863|dbj|BAC95693.1| predicted membrane protein [Vibrio vulnificus YJ016]
          Length = 1295

 Score = 46.0 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 86/303 (28%), Gaps = 29/303 (9%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89
             F+++ +       G  +++           PSV  +        +      ++ + + 
Sbjct: 38  NQFQDEIKTWVKQGTGLDVSISSVSGSWRNSHPSVALQGFEAFLPGEKKVNISVDEVHIE 97

Query: 90  AEFL-PLLSGEIRVFDMYIDQPHLNFY----LSSKGVSNWFQRKSTMDMIHNV------- 137
            + L  +L  +  V ++ +    L+      ++++G         + +  + +       
Sbjct: 98  FDLLESILRLQPVVANLNMSGLALDIRSIELVAAEGPPTREASSESQESSNLIKQLDNLL 157

Query: 138 --ILEKIHVKGGRIKIIDQES-DQVYFLSDLNLQISARFLNIISPLS-----IDSIKGSV 189
              L++  V   +I        ++   +  L  +           +S     ++++  S 
Sbjct: 158 LRQLDEFSVTQSKIWYQSVSGENRRLDIDRLRWRNQGAHHLAEGVVSVAGTNLNALLVSA 217

Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                G+  +    F + A   A  + ++  ++         I L   L     QP Y+ 
Sbjct: 218 NFVDHGSLLDVSGEFYVNAEEIAVTQWLTRYVKKETGIDSGKISLKSWLTLQHSQPRYAF 277

Query: 250 ------VFSVAGDFSKLLNLELSAKKSRLSG---NFKISDGNVRISRYKLQSILPNSSTD 300
                   S   +    L LE    K    G           +R    +   +       
Sbjct: 278 VELLPSELSWTENGQHELTLESGILKLSPDGEGWKVSGHSLTLRTDEIEWPQLDIAFDWQ 337

Query: 301 EDN 303
              
Sbjct: 338 PQG 340


>gi|320155229|ref|YP_004187608.1| hypothetical protein VVM_00733 [Vibrio vulnificus MO6-24/O]
 gi|319930541|gb|ADV85405.1| possible exported protein [Vibrio vulnificus MO6-24/O]
          Length = 1295

 Score = 45.6 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 86/303 (28%), Gaps = 29/303 (9%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89
             F+++ +       G  +++           PSV  +        +      ++ + + 
Sbjct: 38  NQFQDEIKTWVKQGTGLDVSISSVSGSWRNSHPSVALQGFEAFLPGEKKVNISVDEVHIE 97

Query: 90  AEFL-PLLSGEIRVFDMYIDQPHLNFY----LSSKGVSNWFQRKSTMDMIHNV------- 137
            + L  +L  +  V ++ +    L+      ++++G         + +  + +       
Sbjct: 98  FDLLESILRLQPVVANLNMSGLALDIRSIELVAAEGPPTREASSESQESSNLIKQLDNLL 157

Query: 138 --ILEKIHVKGGRIKIIDQES-DQVYFLSDLNLQISARFLNIISPLS-----IDSIKGSV 189
              LE+  V   +I        ++   +  L  +           +S     ++++  S 
Sbjct: 158 LRQLEEFSVTQSKIWYQSVSGENRRLDIDRLRWRNQGAHHLAEGVVSVAGTNLNALLVSA 217

Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                G+  +    F + A   A  + ++  ++         I L   L     QP Y+ 
Sbjct: 218 NFVDHGSLLDVSGEFYVNAEEIAVTQWLTRYVKKETGIDSGKISLKSWLTLQHSQPRYAF 277

Query: 250 ------VFSVAGDFSKLLNLELSAKKSRLSG---NFKISDGNVRISRYKLQSILPNSSTD 300
                   S   +    L LE    K    G           +R    +   +       
Sbjct: 278 VELLPSELSWTENGQHELTLESGILKLSPDGEGWKVSGHSLTLRTDEIEWPQLDIAFDWQ 337

Query: 301 EDN 303
              
Sbjct: 338 PQG 340


>gi|118590059|ref|ZP_01547463.1| hypothetical protein SIAM614_15380 [Stappia aggregata IAM 12614]
 gi|118437556|gb|EAV44193.1| hypothetical protein SIAM614_15380 [Stappia aggregata IAM 12614]
          Length = 1093

 Score = 45.6 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 37/337 (10%), Positives = 88/337 (26%), Gaps = 23/337 (6%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK---GGIKIHI- 58
           +R       +   ++ G             R           G +  V+   G   +   
Sbjct: 19  KRFRYIAAAVLIGLVGGLVI---LFATGPVRIPLLGSLLAYQGTRGQVQLSIGSASVDFT 75

Query: 59  LP-FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
            P   ++   D  +D             L+       LLSG++    + + +PH+   L 
Sbjct: 76  APDGINILVSDANVDIAGGSPVSISFPELTAPLNRDALLSGKVHFSSLNLTKPHVRIVLD 135

Query: 118 SKGVSNWFQRK----------STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNL 167
                                   D      L  + ++    ++      +   +    L
Sbjct: 136 GGPAKLPEMGPLMEAVDRVSEVVDDQFARRGLSFVKIRNASFELAGSFPRRYSGIDADIL 195

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITAN---FPAKNKAISLKIQLF 224
           +   R +   + ++ +     +             +  +  N           +  +Q  
Sbjct: 196 RDENRSIRAFARVAGNVSTWRLELARNAPLGANAKSIGVVVNGITLAELLGPSAKSVQGK 255

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
            L  P    +   L  + K    + V  +   + +L    ++   + LS  F+     + 
Sbjct: 256 GLGLPASAKIESRLTGDGKFVSANAVARIRNGWFQLGKTLVAFDDAALSLLFEAGQDAIE 315

Query: 285 ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321
           I+   +     NS        + +  E      + N 
Sbjct: 316 ITSSHVIRG--NSRFFFTGSIRPTAGETPEWQINLNS 350


>gi|78357883|ref|YP_389332.1| hypothetical protein Dde_2842 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78220288|gb|ABB39637.1| hypothetical protein Dde_2842 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 267

 Score = 45.6 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 59/175 (33%), Gaps = 32/175 (18%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQAT----LIVGKKIAVKGGIKIH 57
           ++++L  +  L  ++     T+ L I+        E+        +   K+++ G   + 
Sbjct: 1   MKKLLALVAVLGVIIAGLVVTLVLSIN-----PIIEKAVNTFGPKLTQAKVSLSG-ADVS 54

Query: 58  ILPFPSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
            +       K   +            K++ + ++     L S  I +  + I  P + + 
Sbjct: 55  FMSGEG-SLKGFVLGNPSGFQSDHAMKVDSVLVKINKDTLTSNTIVINLVEIVNPDIIYE 113

Query: 116 L-------------------SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI 151
                               S  G +   ++ +       VI++K  V+GG++ +
Sbjct: 114 KSGRTDNFTALLNNVKKAVASGSGQTPAQEQPAESGSQRKVIIDKFVVRGGQVSL 168


>gi|57238852|ref|YP_179988.1| hypothetical protein Erum1210 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57160931|emb|CAH57836.1| putative exported protein [Ehrlichia ruminantium str. Welgevonden]
          Length = 877

 Score = 45.6 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 40/325 (12%), Positives = 103/325 (31%), Gaps = 35/325 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI------- 56
           + L+  G    + L+     P FI+W  +       A+ ++ +   +   I +       
Sbjct: 2   KFLVYFGSAILIFLLFLVVSPFFINWNSY------YASHVLKQIENISSDISVKGVNNVT 55

Query: 57  -HILPFPSVFFKDIRIDQKEDGSFE---SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112
             ++  P +   ++ ++   D S       IE L ++   L LL    +V+ + +D   +
Sbjct: 56  GSLV-LPKIVVNNLHVESGSDSSDYKSTILIERLELKISLLSLLLFSPKVYAVTVDGLSM 114

Query: 113 NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII-DQESDQVYFLSDLNLQISA 171
                   +S++ +            +   +++   I    D+ S     +      I  
Sbjct: 115 PLGSLVDILSSFKKGS--------FQIGTFNIRNSVINTHYDRTSFSSKPIYIKEGNIKT 166

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
                +    +D  K S       + D  +     + +       +S           I+
Sbjct: 167 INDTKVISGLLDIGKNSYTMTADVSLDKTQYRIAGSVSSELTKVTLSGVSYENKFDGVIV 226

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
                   +       +         + + +   S ++  LS N K++D    ++ +K+ 
Sbjct: 227 AKGSNFAQFINDLSETN--------KTSVFSFINSQEEFSLSSNIKLTDKRFELTDFKVA 278

Query: 292 SILPNSSTDEDNKTKVSQDEENLLN 316
           +   N   +    +  S + +   +
Sbjct: 279 TGSLNGLGNITCLSYSSCNIDIDFS 303


>gi|320103340|ref|YP_004178931.1| hypothetical protein Isop_1800 [Isosphaera pallida ATCC 43644]
 gi|319750622|gb|ADV62382.1| hypothetical protein Isop_1800 [Isosphaera pallida ATCC 43644]
          Length = 1166

 Score = 45.6 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 43/368 (11%), Positives = 101/368 (27%), Gaps = 57/368 (15%)

Query: 8   GLGFLFSVVLVGAFTVPL-FIDWTDFREDFERQATLIV-GKKIAVKGGIKIHILPFP-SV 64
           GL  +   ++ G + +    +D     +     AT  +   ++ V+   ++   P    +
Sbjct: 50  GLALVMLTLIGGGWGLIRNLLDDQRLAQLVVAHATKYLPTSELKVE---RVDFEPLSDKI 106

Query: 65  FFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
               I I+Q+         +   + +      LL G  +   + + QP L       G  
Sbjct: 107 RLNRIEINQEAQRGRVETLRFPWIEVLHNPKALLEGHFQPIKVSLAQPRLRLARQQDGRW 166

Query: 123 NWFQRKSTMDMIHNVILE-KIHVKGGRIKIIDQESDQVYFLSDLNLQIS-----ARFLNI 176
           N     +       + +  +I ++GG +++ D  S  +  L +  + I      +  L  
Sbjct: 167 NVQTLLADPWPGMPMKVWPEIEIQGGVVELTD-ASGVIGLLDNAQVVIKRVSRQSPDLMS 225

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS------------------ 218
               +   +  S+   G  +  N              ++++                   
Sbjct: 226 YRIAARGRVVDSIELHGQFDKSNGAVVISGIIRGLKLSESLQNCLPSDLRMAFRRSRLEG 285

Query: 219 -------LKIQLFPLAYPIIIDLFG--------NLFWNEKQPIYSGVFSVAGDFSKLLNL 263
                  ++++  P+  P      G        NL   +    Y     +     +    
Sbjct: 286 GRLDLEIVRLERPPIWGPTKAQPPGKPGDKASLNLNPIQGPWRYELTARLREASLREDPA 345

Query: 264 ELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ-DEEN---LLNFSE 319
                        K   G +  S ++       +      +  +     E       F  
Sbjct: 346 PFRLTDVTADLQLKTGWGRLDASGWRG-----PTRVRLTGEFGIDLTAPEPTFEDFKFDL 400

Query: 320 NGAESMHD 327
           N  +   D
Sbjct: 401 NVIDLSLD 408


>gi|238792993|ref|ZP_04636622.1| hypothetical protein yinte0001_32880 [Yersinia intermedia ATCC
           29909]
 gi|238727593|gb|EEQ19118.1| hypothetical protein yinte0001_32880 [Yersinia intermedia ATCC
           29909]
          Length = 1249

 Score = 45.6 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 50/407 (12%), Positives = 119/407 (29%), Gaps = 55/407 (13%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL  +  DFR   + Q   I G+++ + G   + I             +    + 
Sbjct: 206 ALFAKPLLPELPDFRLPLDLQIKEISGQQLRLTGDTDVVISSLLLQASTQENQITLDKLE 265

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVF-------DMYIDQP---HLNFYLSSKG 120
           I   + G        L+       +++  + +         + +       LN  L+  G
Sbjct: 266 IKSPQGGLSAQGDATLTDNWPVSMVINSALNIEPLKGEKVKLTVGGALREKLNVALNLSG 325

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +      T      + L  + ++  +++      +  Y + +L ++++ +  +    +
Sbjct: 326 PVSAQLDAETALAQAGLPL-VLTLQSKQLRWP-LSGEPQYQIDNLKMRLNGQATDYALSI 383

Query: 181 SIDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDL 234
             D             +G GN +      ++       N  ++  +     +++  ++ L
Sbjct: 384 RSDFKGTDLPPAVFTLDGKGNVEQFNLT-RLRLAALQGNTDLTGVVDWSKAISWNSVLTL 442

Query: 235 FG---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD--- 280
            G      W E      G     G             L L+ + K++R++    ++    
Sbjct: 443 SGINTAKQWPEWPAKLDGKIVTRGSIHGGSWQLQVPELALDGNVKQNRVTARGSLTGNAA 502

Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKK 340
           G   I    L      +  D          +   L+ + +  +    L       +   K
Sbjct: 503 GQWHIPGINLALGR--NKLDVKG----DLSDTWQLDANVDAPQLDGALPGLGGVVKGALK 556

Query: 341 NKN--------DDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
            +          DL    +Q+            D  + +   G   I
Sbjct: 557 LRGNLKAPQLLADLTASRLQWQELTINRIKIDGDVRSTDQIQGQLAI 603


>gi|56461258|ref|YP_156539.1| hypothetical protein IL2158 [Idiomarina loihiensis L2TR]
 gi|56180268|gb|AAV82990.1| Uncharacterized conserved secreted protein [Idiomarina loihiensis
           L2TR]
          Length = 582

 Score = 45.6 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 50/155 (32%), Gaps = 17/155 (10%)

Query: 2   LRRVLI---GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58
           ++R +I   GL      VL+    +         +   E     + G ++ ++  ++   
Sbjct: 1   MKRSIIRWPGLAVFAGFVLL-LVAISWLFLDAIIKVTLEHTLGRLNGAEVNIE-RVEHSW 58

Query: 59  LPFPSVFFKDIRIDQKE-DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
           +P  S+    I++       +   ++   S       ++ G   +  + +    +N    
Sbjct: 59  VP-LSLTLAGIQVTDPNAPKNNRVQVGEASADISPTEIVLGRTLIEQLTMTGVRVNQPRE 117

Query: 118 SKG----------VSNWFQRKSTMDMIHNVILEKI 142
           S+G          V NW  +           ++ I
Sbjct: 118 SEGDVYVMPDQEDVQNWASQSWDKLTTSLPSVDDI 152


>gi|42524348|ref|NP_969728.1| hypothetical protein Bd2946 [Bdellovibrio bacteriovorus HD100]
 gi|39576557|emb|CAE80721.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio
           bacteriovorus HD100]
          Length = 651

 Score = 45.6 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/295 (11%), Positives = 82/295 (27%), Gaps = 18/295 (6%)

Query: 12  LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71
              +  V       F D    R+  E      VG ++ +   ++       S+  + I +
Sbjct: 26  FVIICAVIGLYFHFFFD-AHLRKGMEWAGYKAVGAEVNIA-KVETSFF-EASLRIQGIEV 82

Query: 72  DQKEDGS-FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
              E  +     I  +     +  LL  ++ V +  ++Q       +  G         +
Sbjct: 83  TDAEKPTHNSLNIGDIRFSMLWDALLRAKVVVNEAVVEQIAFGVKRARPGRV-APPEPVS 141

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQ----------ESDQVYFLSDLNLQISARFLNIISPL 180
            +      L++  +   + +  D            +D    L  L   + ++ +      
Sbjct: 142 NEPGFADKLKEQAISEAQQQAGDSVLGDVIAMLTGTDANVQLQKLQDSLPSKAMLESFEK 201

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
            + + + +  A        K            K K      +L      +          
Sbjct: 202 DLKAKQATWDARMKSLPQGKDIEALNKRLNSIKYKDFKTPQELQSSLQELDKVFK---DG 258

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
           +       G  +      K L  +    + ++  + K  + + RI +   +S+  
Sbjct: 259 DAMYKQVQGAGNDLQKDLKALEAQYKEIEKQVKTDIKSLEQHFRIPKLDAKSMSM 313


>gi|30248933|ref|NP_841003.1| putative signal peptide protein [Nitrosomonas europaea ATCC 19718]
 gi|30138550|emb|CAD84840.1| putative signal peptide protein [Nitrosomonas europaea ATCC 19718]
          Length = 1324

 Score = 45.3 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/295 (11%), Positives = 89/295 (30%), Gaps = 29/295 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR+ L G+  +  + +   F     I  +         A+   G  +   G     +   
Sbjct: 22  LRKWLAGIATVVVLAVTSGFY--WLIFTSAGLHWLLMIASQATGGALTFSG-----VNGS 74

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
                    I  + D    +++E ++ R +   LL+G++ +  + I    ++   +S+  
Sbjct: 75  LHHTVHAGMIAYQSDELT-ARVEDMTFRWQPRQLLTGKLHIETLMIRSVEVH-SAASEQE 132

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                    + +  + ++EK+ ++  + +           ++DL L++ +          
Sbjct: 133 EEPVTLPENLSLPVDAVIEKLGIRSLK-RYTLGNDQPDIVMTDLALRLDSDGKRHHLQTL 191

Query: 182 IDSIK-------------GSVIAEGTG---NFDNKRSAFKITANFPAKNKAISL---KIQ 222
              ++                         N+ N  +     A + A     +L   +  
Sbjct: 192 ALGLEWGKIAGNLEIGIHPPFDLASQLVFYNWANVANTSSEPAGYAAVRLGGNLQQIQAA 251

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
           L      +       +   +  P+      V+G    + + +L       S    
Sbjct: 252 LTIADRKLAGKGNFTIHPFDALPLLEANLVVSGLDLNVFSSDLPKADLSFSSQLA 306


>gi|295133927|ref|YP_003584603.1| hypothetical protein ZPR_2082 [Zunongwangia profunda SM-A87]
 gi|294981942|gb|ADF52407.1| conserved hypothetical protein [Zunongwangia profunda SM-A87]
          Length = 1670

 Score = 45.3 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 48/405 (11%), Positives = 120/405 (29%), Gaps = 37/405 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQA----TLIVGKKIAVKGGIKIH 57
           LR+ L     + + +L+    + LFI     +     +           ++ +    ++ 
Sbjct: 8   LRKALRITLRILAGILIFFVLLILFIRSPWGQNIIVNKVVSTIQNKTNTEVEID---RLF 64

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYL 116
           I    ++  + + ++ K+          L       P++ G    V D+ +     N Y 
Sbjct: 65  ITFGGAISLEGLYLEDKKG-DTLVYAHNLEANIPIWPIIKGSGFGVNDLDLKGLKANIYR 123

Query: 117 -SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
             S    N+               ++  V+      +D        L ++ L  + +   
Sbjct: 124 EDSISGYNFQFLVDAFAASDTTNTQQTKVQDTTSSSMDISIG-DVNLQNIILNYNDQVAG 182

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
           + + L +  +  ++      N   + +   ++       +  +L           ++ + 
Sbjct: 183 MEAQLKLGELDVAMRKTDLKNMQFEVADASLSNTMIVYRQLKTLPPGEDTETPMPLVVVD 242

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GNFKISDGNVRISR----YKL 290
                N             G  + +   E  A+  ++  GN++I   N+ + R     ++
Sbjct: 243 ---RLNLNNVNAKYQSEPGGILADVHIPEFIAEMPKMDLGNYEIQFNNISLKRSNVLLRM 299

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF-----------FEEEEK 339
           Q+    S   +  K   +         +          N   +           F     
Sbjct: 300 QTKTAQSQPQDSIKNDTTGFVWPAWKINVK--RIDLAQNNIAYIVDSAKIEQRQFNPNAL 357

Query: 340 KNKNDDLKKDDIQYSVNKKEEKDNSHDKE-----NQENFSGDKMI 379
           K +N  LK  +I  + +K     N    +     +   FS +  +
Sbjct: 358 KFRNLRLKTGNIALADHKLNADINQVSFQEASGLDLREFSTEITL 402


>gi|187736128|ref|YP_001878240.1| hypothetical protein Amuc_1639 [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187426180|gb|ACD05459.1| hypothetical protein Amuc_1639 [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 527

 Score = 45.3 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 38/372 (10%), Positives = 100/372 (26%), Gaps = 44/372 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLF----IDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58
           +R LIGL  L  +         ++     +  +F    +   +   G ++ + G + +  
Sbjct: 52  KRFLIGLCILVLLAAGALAGTYMYRLTSFNTEEFAGRLQADLSAAWGGEVKISG-MAVD- 109

Query: 59  LPFPSVFFKDIRIDQKEDG-SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
               ++    IRI   ED       +EG+S     +PL  G+I+   + + +  +     
Sbjct: 110 --GLTMKASRIRISFPEDSCLSFVAMEGISGEISAVPLFMGKIKGESLNVSRAVVGLRP- 166

Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
             G   +   ++  ++                             +   L++        
Sbjct: 167 --GFVKFAVPQTKRELPFVFR----------------------RYTAPRLEVGYAHGTEE 202

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
             L  +     + AE            +   +   +   I     +   +  +I++  G 
Sbjct: 203 FTLERNGAPFYMTAEAYIRTSGNGPEPEYVLDLSQQKLKIKGWPLMGVDSGSVILNGSGV 262

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297
                   +  G             +  +        +F+     +    + L S+L + 
Sbjct: 263 KQLTFSGFLDKGRLLNKPTDLSPFMITGNFLLGT---DFRHQAWTLTGKNFDLASLLGDD 319

Query: 298 STDE----DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353
            +        + +  +  E  L+F+        +              K   ++   ++ 
Sbjct: 320 FSSLLKVQTGEQEGDEKHELKLDFALP---VTTEQKRPSLKGYSGSVIKATMIRLPVLRL 376

Query: 354 SVNKKEEKDNSH 365
                       
Sbjct: 377 LAAMTARNTEIR 388


>gi|213029573|ref|ZP_03344020.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
          Typhi str. 404ty]
 gi|213580365|ref|ZP_03362191.1| AsmA family protein [Salmonella enterica subsp. enterica serovar
          Typhi str. E98-0664]
          Length = 102

 Score = 44.9 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 4/33 (12%), Positives = 14/33 (42%)

Query: 26 FIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58
            DW   +    ++ +  + +  A++G + +  
Sbjct: 28 TFDWNRLKPTINQKVSTELNRPFAIRGDLGVVW 60


>gi|311746029|ref|ZP_07719814.1| hypothetical protein ALPR1_06355 [Algoriphagus sp. PR1]
 gi|126576245|gb|EAZ80523.1| hypothetical protein ALPR1_06355 [Algoriphagus sp. PR1]
          Length = 1648

 Score = 44.9 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 47/380 (12%), Positives = 105/380 (27%), Gaps = 53/380 (13%)

Query: 18  VGAFTVPLFIDWTDFREDFERQA----TLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ 73
           V    + LFI     +     +A        G  + ++   ++ I    +++  +  I  
Sbjct: 2   VLILALILFIRSPWGQGIIVDKAVTFLEDKTGADVEIE---RLFITFSGNIYLDNFYISD 58

Query: 74  KEDGSFESKIEGLSMRAEFLPLLS-GEIRVFDMYIDQPHLNFYLSSK-GVSNWFQ----- 126
                  +    L     F+PL+  G I V +   D   +      + GV N+       
Sbjct: 59  VNG-DTLAYSRELEAGIAFVPLIKNGAIHVSNFEWDGLKVRVKRPEESGVYNFQFIIDAF 117

Query: 127 ----------RKSTMDMIHNVILEKIHVKGGRIKIIDQESD--QVYFLSDLNLQISARFL 174
                              ++ L  I ++   I+  D+         L D  L I    L
Sbjct: 118 SSGEEEVAETPPEEESPQLDITLSPISLRNFDIQFKDEVLGIEASILLGDFELAIPELDL 177

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
           N         +      +         S      +     K   L +    L Y   +D 
Sbjct: 178 NKYEFGIGSVLLSDTEIKYIQTKPLAESEETEEESIMPLIKLDELTLNNINLNYENQVDQ 237

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSR----------------------- 271
                + +   I      +A    ++  + L+                            
Sbjct: 238 QQADVFIQAFSIGMPKLDLAQQIVEINEVSLAESSILYHDFSPSPATQENTSASLETEEF 297

Query: 272 LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNET 331
              ++K++   + +S   L+    +  +    K + + +   L   +  G++   D +  
Sbjct: 298 AWPDWKVNLSKITLSENNLEYKTVDLPSK---KGEFNPEVILLNQLNLEGSDISLDESSA 354

Query: 332 DFFEEEEKKNKNDDLKKDDI 351
               E+ +  +    +  D+
Sbjct: 355 KLLIEKFQLQEGSGFELKDL 374


>gi|188535059|ref|YP_001908856.1| Conserved hypothetical protein (DUF490) [Erwinia tasmaniensis
           Et1/99]
 gi|188030101|emb|CAO97987.1| Conserved hypothetical protein (DUF490) [Erwinia tasmaniensis
           Et1/99]
          Length = 1257

 Score = 44.9 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 87/300 (29%), Gaps = 19/300 (6%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL  D  +F    +     I+G+++ + G   I +             +  + + 
Sbjct: 214 ALFAKPLLPDLPEFILPLDVNVQQILGEQLRITGDSDIAVNRLLLKAKTEHNQLQLQTLD 273

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
           +D  +          LS        L+G I +  +  ++  +      +         S 
Sbjct: 274 VDSPQGQLNAQGGATLSGSWPMSFTLNGAINLDPLKGEKIKMTLDGGLRDTLKLALNLSG 333

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                     ++ V G  I +  Q     +      L+ +A+F       S +      +
Sbjct: 334 PVRAQLDADSQLAVAGLPINMRLQSPQLRW-----PLEGAAQFQANNVNFSFNGKATDYV 388

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    +      T     K       +  L   A     DL   + W++    +  
Sbjct: 389 MSLKAALQGEGVP-PATLTLDGKGNVEQFSLDKLRLAALQGNTDLTALVDWSK-AISWHS 446

Query: 250 VFSVAGDFSKLLNLELSA---KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
             +++G  +     +  A    K    G+       +R+   KL+  + N++   D    
Sbjct: 447 ELTLSGINTAKQYPDWPAKLEGKITTRGSLYGGSWQMRVPELKLKGNVRNNAVSADGSLS 506


>gi|324115151|gb|EGC09115.1| adhesin HecA family protein [Escherichia fergusonii B253]
          Length = 1260

 Score = 44.5 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 35/290 (12%), Positives = 79/290 (27%), Gaps = 17/290 (5%)

Query: 21  FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSF 79
             +P       +R +   +     G  +     +      F P++  +DI  D K+ G  
Sbjct: 25  LALPHL---DHWRPEILNKIESATGVPVD-ASQLSASWQTFGPTLEARDIHADLKDGGE- 79

Query: 80  ESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQRKSTMDMIHNV 137
              ++ +++  +    LL    +  D+   Q           G        S +  +   
Sbjct: 80  -FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPIEPGDGGEGLEGSQLSDLFLR 138

Query: 138 ILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193
             +   ++   +  I     +       L+ LN Q   R    +S  S+    G +    
Sbjct: 139 QFDHFDLRDSEVSFITLSGQRAELAIPQLTWLNDQARHRAEGQVSLSSLTGQHGVMQVRM 198

Query: 194 TG-NFDNKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250
              + D      +I       +    L   +Q           L G +  ++   I   +
Sbjct: 199 DLQDNDGLLKDGRIWLQADDIDVKPWLGKWMQDNIALETAQFSLEGWMTIDDGDIIGGDI 258

Query: 251 -FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
                G          +     L+ +        + S    +  + +   
Sbjct: 259 WLKKGGASWLGEGKTHTLSVDNLTAHITREQPGWQFSIPDTRITMDDKPW 308


>gi|218550529|ref|YP_002384320.1| hypothetical protein EFER_3223 [Escherichia fergusonii ATCC 35469]
 gi|218358070|emb|CAQ90716.1| conserved hypothetical protein; putative membrane protein, putative
           transporter [Escherichia fergusonii ATCC 35469]
          Length = 1263

 Score = 44.5 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 35/290 (12%), Positives = 79/290 (27%), Gaps = 17/290 (5%)

Query: 21  FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSF 79
             +P       +R +   +     G  +     +      F P++  +DI  D K+ G  
Sbjct: 28  LALPHL---DHWRPEILNKIESATGVPVD-ASQLSASWQTFGPTLEARDIHADLKDGGE- 82

Query: 80  ESKIEGLSMRAEFL-PLLSGEIRVFDMYIDQPHLNFYLS-SKGVSNWFQRKSTMDMIHNV 137
              ++ +++  +    LL    +  D+   Q           G        S +  +   
Sbjct: 83  -FSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPIEPGDGGEGLEGSQLSDLFLR 141

Query: 138 ILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193
             +   ++   +  I     +       L+ LN Q   R    +S  S+    G +    
Sbjct: 142 QFDHFDLRDSEVSFITLSGQRAELAIPQLTWLNDQARHRAEGQVSLSSLTGQHGVMQVRM 201

Query: 194 TG-NFDNKRSAFKITANFPAKNKAISLK--IQLFPLAYPIIIDLFGNLFWNEKQPIYSGV 250
              + D      +I       +    L   +Q           L G +  ++   I   +
Sbjct: 202 DLQDNDGLLKDGRIWLQADDIDVKPWLGKWMQDNIALETAQFSLEGWMTIDDGDIIGGDI 261

Query: 251 -FSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
                G          +     L+ +        + S    +  + +   
Sbjct: 262 WLKKGGASWLGEGKTHTLSVDNLTAHITREQPGWQFSIPDTRITMDDKPW 311


>gi|238757548|ref|ZP_04618733.1| hypothetical protein yaldo0001_30420 [Yersinia aldovae ATCC 35236]
 gi|238704310|gb|EEP96842.1| hypothetical protein yaldo0001_30420 [Yersinia aldovae ATCC 35236]
          Length = 1249

 Score = 44.5 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 41/345 (11%), Positives = 106/345 (30%), Gaps = 47/345 (13%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL  +  DFR   + Q   I G+++ + G   + I             +    + 
Sbjct: 206 ALFAKPLLPELPDFRLPLDLQIKSITGQQLRLTGDTDVLINSLLLQASTQENHIKLDALE 265

Query: 71  IDQKEDG----SFESKIEGLSMRAEFLPLLSGEI-RVFDMYID-----QPHLNFYLSSKG 120
           I   + G       +  +   +       L+ E  +   + +      +  L   L+  G
Sbjct: 266 IKSPQGGLSAHGEATLADKWPLDIVINSALNIEPLKGEKIKLTVGGDLRDQLTVALNLSG 325

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +      T      + L  + ++  +++      +  Y ++ L ++++ +  +    +
Sbjct: 326 PVSAQLDAQTSLAQAGLPLA-LTLQSKQLRWP-LAGEPQYQINHLRMRLNGQATDYALSI 383

Query: 181 SIDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDL 234
             D             +G GN +      ++       N  ++  +     +++  ++ L
Sbjct: 384 RSDFNGTDLPPALFTLDGKGNVEQFSLT-RLRLAALQGNTDLTGVVDWRKAVSWNSVLTL 442

Query: 235 FG---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD--- 280
            G      W +      G     G             L L+ + K++R++    ++    
Sbjct: 443 SGINTTKQWPDWPAKLDGKIVTRGSLHGGSWQLQVPELTLDGNVKQNRVTARGSLTGNAA 502

Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
           G   I    L      +  D         ++   L+ + +  +  
Sbjct: 503 GQWHIPGINLALGR--NRLDVKG----DLNDHWQLDANIDAPQLD 541


>gi|325277899|ref|ZP_08143443.1| hypothetical protein G1E_29627 [Pseudomonas sp. TJI-51]
 gi|324096970|gb|EGB95272.1| hypothetical protein G1E_29627 [Pseudomonas sp. TJI-51]
          Length = 357

 Score = 44.5 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 41/359 (11%), Positives = 106/359 (29%), Gaps = 18/359 (5%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R  LIGL  L ++++     +P  +     R+    +   +   +  V   + +      
Sbjct: 6   RWPLIGLASLVALLVALHLALPYLV-----RDYLNDKLADMGDYRGHVA-DVDLAWWRG- 58

Query: 63  SVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           +     +RI +              + +   +  L+  +  V  +  +QP LNF      
Sbjct: 59  AYRINGLRIVKTSGKVPVPLLDAPVIDLSVSWHSLIYDKAVVAKVIFEQPELNFVDGGNK 118

Query: 121 VSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL-- 174
            ++   + +        +  + L+++H+  G +   +  S+    L    L  +   L  
Sbjct: 119 QASQTGQGTDWRQQLEKLLPITLDEVHIDNGTLTFRNFNSNPPVNLKATRLDATISNLTN 178

Query: 175 -NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
                     S +G+ +  G    +++ +    +     + +  +  I+L  L       
Sbjct: 179 VRDKQGRRDASFEGTALIAGNAKVESRATFDPFSDFDDFEFRLRATGIELRNLND--FAS 236

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
            +G   ++                       L            + + +    R   +++
Sbjct: 237 AYGKFDFSAGHGDVVIEAQAENGRLNGYIKPLLRDVDVFDWQQDVENKDKGFFRSVWEAL 296

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
           +  S T   N+ K        L+ S +                   +  N   ++   +
Sbjct: 297 VGASETVLKNQPKNQFATRVELSGSVHKQNISAFEAFLQILRNGFIQAFNARYEQPAPK 355


>gi|296122562|ref|YP_003630340.1| hypothetical protein Plim_2315 [Planctomyces limnophilus DSM 3776]
 gi|296014902|gb|ADG68141.1| hypothetical protein Plim_2315 [Planctomyces limnophilus DSM 3776]
          Length = 1089

 Score = 44.1 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 9/152 (5%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVP--LFIDWTDFREDFERQATLIV-GKKIAVKGGIKIH 57
           MLR      G +  + + GA       F      RE+  RQ         I + G     
Sbjct: 1   MLRTFRWIFGIVVLLGIAGAGGAGALYFRSDAMLREEALRQFARACPDSIITLDG---AR 57

Query: 58  ILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYL 116
                 +   +++I  +      + I  L +  +   L   + I +  + + QPH++   
Sbjct: 58  FDFSGRIRLFNLQITPEGQELPLAVIPELIVSLDREQLSQHQLIVIEQLRLIQPHIHLKR 117

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR 148
           S+ G  N+            +   +I ++ GR
Sbjct: 118 SADGHWNFESLALARQSAMAMP--EIFIESGR 147


>gi|327482017|gb|AEA85327.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 962

 Score = 44.1 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 77/251 (30%), Gaps = 32/251 (12%)

Query: 73  QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW-------- 124
              DG    ++E L +    L L   ++ +  +            + G  NW        
Sbjct: 275 DSPDGRKLVRLERLELSETTLDLARRQVSIGKLRSRHLETWAAREADGELNWQKLFAAGP 334

Query: 125 ----------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS--DLNLQISAR 172
                          T      V+L+   ++  R+ + D+  D    L    LNL IS  
Sbjct: 335 SPSNADEQIADSETQTAGEPWQVLLQDAQLRDYRVHLADRVPDDEVQLELGPLNLDISDF 394

Query: 173 FLNIISPLSID-----SIKGSVIAEGTGNFDNKRSAF-------KITANFPAKNKAISLK 220
                 P S+        +G++ A+G    +              +       +  +SL+
Sbjct: 395 DSLAARPFSLKLDTGVGRQGALQAQGQLQLNPISGQLAVTTRDIDLRIAQAYLSPLVSLE 454

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISD 280
           ++   L+  + +DL G                +    +      +  ++ +LSG      
Sbjct: 455 LRSGMLSSELQVDLQGTEPLAFSVRGSVDATQLHTLDTINNRDFVKWQRLQLSGLDYQHP 514

Query: 281 GNVRISRYKLQ 291
            ++ I R  L+
Sbjct: 515 RSLDIERIDLR 525


>gi|317049729|ref|YP_004117377.1| hypothetical protein Pat9b_3531 [Pantoea sp. At-9b]
 gi|316951346|gb|ADU70821.1| protein of unknown function DUF490 [Pantoea sp. At-9b]
          Length = 1256

 Score = 44.1 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 40/358 (11%), Positives = 101/358 (28%), Gaps = 56/358 (15%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           ++VLIG G    ++      +                     G  + +KG      +P  
Sbjct: 5   KKVLIGFGIFLLLIFGSVAFLIGTTP----------------GLHLLLKGAD--RWVPGL 46

Query: 63  SV-----FFKDIRIDQKEDGSFESKIE--GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           S+      ++D+ +   +       ++     +      LL   + V D+ +    +   
Sbjct: 47  SIDKVEGGWRDLTLSGVKYEMPGVSVDAGRFHLALRLNCLLHSAVCVNDIALQDVSVVVD 106

Query: 116 LSS------------KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
                           G +N             +    + V    I ++D  +   +   
Sbjct: 107 SKKMAPASQAAPEPESGTTNLSTPYPITLSKVGLHNINVKVDDTAISLLDFTTGLHWQDR 166

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN---------KRSAFKITANFPAKN 214
            L L  +     +I+      +    + +                 ++ F         +
Sbjct: 167 ALTLTPTHIESLLIALPKAAKVVDEQVVQPKVQQPQPDEKPLGETLQAMFAQPLLPALPD 226

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274
             + L I +  L+    + L G+        +     +      +  +++ +  +   SG
Sbjct: 227 FQLPLDITVQELSGK-QLRLTGDTDVTINSLLLKAQTNDRHLQLETFDVDSTQGQVNASG 285

Query: 275 NFKISD---------GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
              ++D         G V +   K + I  N S    ++ K++ +    +    + A 
Sbjct: 286 EATLADNWPVNFALNGAVNLDPIKGEKIKLNLSGALRDELKLALNLSGPVQAQLDAAA 343



 Score = 40.6 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 88/309 (28%), Gaps = 37/309 (11%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL     DF+   +     + GK++ + G   + I             +  +   
Sbjct: 214 AMFAQPLLPALPDFQLPLDITVQELSGKQLRLTGDTDVTINSLLLKAQTNDRHLQLETFD 273

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
           +D  +     S    L+        L+G + +  +  ++  LN                 
Sbjct: 274 VDSTQGQVNASGEATLADNWPVNFALNGAVNLDPIKGEKIKLNL-------------SGA 320

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
           +     + L        ++   D  +        L+L++++  L       +      + 
Sbjct: 321 LRDELKLALNLSGPVQAQL---DAAAQPAAVGLPLSLKLTSPQLRWPLTGPVQYQADKLD 377

Query: 191 AEGTGNFDNKRSAFKIT-----ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW----- 240
            +  G   +   + +                    +Q F L    +  L GN+       
Sbjct: 378 YQFKGKATDYVMSLRTAVKGEGVPPADIALDGKGNVQQFSLDKLRVAALQGNIDLTALVD 437

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSA---KKSRLSGNFKISDGNVRISRYKLQSILPNS 297
             K   +    +++G  +     E  A    K    G+       + + + +L+  + N+
Sbjct: 438 WSKAISWHSELTLSGINTAKQYPEWPAKLEGKIATRGSLYGGSWQLSVPQLQLKGNVKNN 497

Query: 298 STDEDNKTK 306
           +   D    
Sbjct: 498 AVSADGSLT 506


>gi|26991256|ref|NP_746681.1| hypothetical protein PP_4572 [Pseudomonas putida KT2440]
 gi|24986310|gb|AAN70145.1|AE016654_2 conserved hypothetical protein [Pseudomonas putida KT2440]
          Length = 357

 Score = 44.1 bits (102), Expect = 0.038,   Method: Composition-based stats.
 Identities = 38/360 (10%), Positives = 99/360 (27%), Gaps = 20/360 (5%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R  L+GL  L  +++     +P  +     R+    +   +   +  V   + +      
Sbjct: 6   RWPLVGLASLIVLLVALHLALPYLV-----RDYLNDKLADMGDYRGQVA-DVDLAWWRG- 58

Query: 63  SVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           +     ++I +              + +   +  L   +  V ++    P LNF      
Sbjct: 59  AYQINGLKIVKTTGKVPVPFLDAPLIDLSVSWHSLWYDKAVVAEVTFVHPELNFVDGGSK 118

Query: 121 VSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
            ++   + +        +  + L ++ +  G +   +  S     L    L  S R L  
Sbjct: 119 QASQTGQGTDWRQQLEKLLPITLNEVRIDNGVLTFRNFNSKPPVDLKATRLNASIRNL-- 176

Query: 177 ISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
            + +     +     EGT       +   + T +  +       +++   +    + D  
Sbjct: 177 -TNVRDQQGRRDASFEGTALIAGDAKVESRATFDPFSDFDDFEFRLRATGIELRKLNDFA 235

Query: 236 ---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
              G   +N                       L            + + +    R   ++
Sbjct: 236 SAYGKFDFNAGHGDVVIEAQAENGRLNGYIKPLLRDVDVFDWQQDVEEKDKGFFRSVWEA 295

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
           ++  + T   N+ K        L+ S    +                +  N   ++   +
Sbjct: 296 LVGATETVLKNQPKNQFATRVELSGSVRQQDISAFEAFLQILRNGFVQAFNARYEQPAPK 355


>gi|303327680|ref|ZP_07358120.1| LigA [Desulfovibrio sp. 3_1_syn3]
 gi|302862041|gb|EFL84975.1| LigA [Desulfovibrio sp. 3_1_syn3]
          Length = 1073

 Score = 44.1 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 48/320 (15%), Positives = 104/320 (32%), Gaps = 36/320 (11%)

Query: 40  ATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE 99
            +   G    V+  + + +LP PS+   +  +  K+       +   ++R +FL LL GE
Sbjct: 57  ISARTGLIFCVE-AVDVVLLPVPSIAVSNASVRGKDLH---FSVAYATLRPDFLALLRGE 112

Query: 100 IRVFDMYIDQPHL-NFYLSSKGVSNWFQRKSTMDMIHNVILE---KIHVKGGRIKIIDQE 155
               ++ + +P L        G  +    +   +      L    ++ +  G  ++I   
Sbjct: 113 FVPRNISLLRPKLGGALPLPLGDMDALAARLRGNGGGLPDLPDGCRMTIVQGEAELI-GT 171

Query: 156 SDQVYFLSDLNLQISARFLNIIS------------PLSIDSIKGSVIAEGTGNFD----- 198
                 LS L  ++      ++S              +      + +AEG  +       
Sbjct: 172 DGAHLQLSGLQCRLDTEAPAVVSGRVHLGAVLLRRQGAPLIRLDNFLAEGESDLRTPLTA 231

Query: 199 --NKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS--GVFSVA 254
               R +  +      +   ++L +Q     +    DL G L  + +   +S  G  ++ 
Sbjct: 232 TPKLRLSGSLRWPPFLERFNMALDLQGGATGWTARADLRGELAKDRESLPFSVAGTAAMR 291

Query: 255 GD----FSKLLNLELSAKKSRLSGNFKISDGNVRISR-YKLQSILPNSSTDEDNKTKVSQ 309
           G       + L LEL      LSG  ++        + + L   L             ++
Sbjct: 292 GSEPIVNLERLRLELGPDSGELSGTLRLPGALQNKEQDFSLDGRLLLHRASLTQWLGFAR 351

Query: 310 DEENLLNFSENG-AESMHDL 328
           +    L  + +   +   D 
Sbjct: 352 NLAPGLQLALDNLTDGNLDF 371


>gi|198276057|ref|ZP_03208588.1| hypothetical protein BACPLE_02241 [Bacteroides plebeius DSM 17135]
 gi|198271686|gb|EDY95956.1| hypothetical protein BACPLE_02241 [Bacteroides plebeius DSM 17135]
          Length = 641

 Score = 44.1 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 40/356 (11%), Positives = 99/356 (27%), Gaps = 45/356 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFID---WTDFREDFERQATLIVGKKIAVKGGIKIHI 58
           +RR+LI  G    ++L+                  E    +     G ++       +  
Sbjct: 1   MRRILIYTGAGLLLLLLLLAGGLWIFRNHILNRMAERRIAKLEQRYGLEVNYD---DLRF 57

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
                +F   + +   E       +   +    F  LL G + V D+ +D   ++F   +
Sbjct: 58  EGTGRLFLNGLSVV-PEKRDTLLTLRSATFNLGFWQLLKGNVEVMDVALDGLTVDFVKEN 116

Query: 119 -KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVY----FLSDLNLQISARF 173
            +   ++  R  +          +      R++ +     ++      L+ L+++     
Sbjct: 117 HQANYDFLFRSRSEGEKETERASEKVGYDKRVQTLLSGMFRLLPSEGRLTRLHVRERKDS 176

Query: 174 LNIIS-PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
            ++               ++ T   +     ++      A  + +S+ IQ   L  P   
Sbjct: 177 DSVSLYVPEFCIENHQFRSQLTFVEEGHTQHWETEGEINASERRVSVSIQAPELTVPY-- 234

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
            +   L            F+   +  K++ L     ++ + G  K+    +   R  L  
Sbjct: 235 -IRRRLGAEVAFDRLWLSFTQQKEDEKVILL----GQTEVDG-LKVFHRRLSPERINLDR 288

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD------LNETDFFEEEEKKNK 342
              +                     +        D       N+  F      ++ 
Sbjct: 289 GKLD------------------FQLNVESHALELDSCSTIRFNDLQFHPYLRVESP 326


>gi|213023197|ref|ZP_03337644.1| putative assembly protein [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 171

 Score = 43.7 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 7/80 (8%), Positives = 25/80 (31%), Gaps = 7/80 (8%)

Query: 248 SGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV 307
              + + G       +E    + +L   ++ +   +  +   L +    + +      +V
Sbjct: 4   QLRWQLQGADLPAQGIE---GQGQLQAQWQEAQKRLSFNHLNLTA----NDSSLTGHVQV 56

Query: 308 SQDEENLLNFSENGAESMHD 327
           +  E+         ++   D
Sbjct: 57  TLAEQPEWQIDLRSSKLNLD 76


>gi|170723034|ref|YP_001750722.1| hypothetical protein PputW619_3872 [Pseudomonas putida W619]
 gi|169761037|gb|ACA74353.1| conserved hypothetical protein [Pseudomonas putida W619]
          Length = 357

 Score = 43.7 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 35/330 (10%), Positives = 86/330 (26%), Gaps = 13/330 (3%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMR 89
            R+    +   +   +  V   +++      +     ++I +              + + 
Sbjct: 30  VRDYLNDKLADMGEYRGQVT-DVELAWWRG-AYQINGLKIVKTSGKVPVPLLDAPLIDLS 87

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM----IHNVILEKIHVK 145
             +  L      V ++   +P LNF       ++   + +        +  + L  + + 
Sbjct: 88  VSWHALWYDHAVVAEVTFVRPVLNFVDGGNKQASQTGQGTDWRQQLEKLLPITLNDVRIN 147

Query: 146 GGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFK 205
            G +   +  S     L    L  + R L  +          S  A+      + R   +
Sbjct: 148 DGTLTFHNFNSKPPVDLKATRLDANIRNLTNVRDEKGRRDA-SFEAKA-LLLGDARVESR 205

Query: 206 ITANFPAKNKAISLKIQLFPLAYPIIIDLF---GNLFWNEKQPIYSGVFSVAGDFSKLLN 262
            T +  +       +++   +    + D     G   +N                     
Sbjct: 206 ATFDPFSDFDDFEFRLRATGMELRRLNDFASAYGKFDFNAGHGDVVIEAQAENGRLNGYI 265

Query: 263 LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGA 322
             L       +    I D N    R   ++++  S T   N+ K        L+ S +  
Sbjct: 266 KPLLRDVDVFNWQQDIEDKNKGFFRSVWEALVGASETVLKNQPKNQFATRVELSGSVHQQ 325

Query: 323 ESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
                            +  N   ++    
Sbjct: 326 NISAFEAFLQILRNGFVQAFNARYEQPAPD 355


>gi|71082775|ref|YP_265494.1| membrane-bound pili assembly protein Fimc [Candidatus Pelagibacter
           ubique HTCC1062]
 gi|71061888|gb|AAZ20891.1| possible membrane-bound pili assembly protein Fimc [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 239

 Score = 43.7 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 20/188 (10%), Positives = 71/188 (37%), Gaps = 18/188 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++ L  +           + +  FI     +   E   +  + +++++K  + I  L  
Sbjct: 3   MKKFLSIITIFAL----SFYILVEFIGDRLIKNILEDNISSSLNREVSIK-KLSIDYLSG 57

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL----- 116
                 +I+I  K+     ++++ + +  +   + S +I + D+ ++  +LN+Y      
Sbjct: 58  -EARANNIKILNKKFDGNLAEVDFVKVNLDTFSIFSNDILINDVQLNNINLNYYFKFSDR 116

Query: 117 -----SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII--DQESDQVYFLSDLNLQI 169
                      +   + +         ++ +  K   + ++  D + ++ + ++D+N + 
Sbjct: 117 ITSDNLRNLQQDLEFKNTDSQSSKYFNIKNLDAKNINLAVLSSDFDFEKTFSINDMNFKD 176

Query: 170 SARFLNII 177
                +  
Sbjct: 177 IGNTKDSK 184


>gi|222150012|ref|YP_002550969.1| hypothetical protein Avi_4089 [Agrobacterium vitis S4]
 gi|221736994|gb|ACM37957.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 1404

 Score = 43.7 bits (101), Expect = 0.045,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 79/255 (30%), Gaps = 10/255 (3%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R +  GL  L ++++V    V      + F  DF         + IAV G   I  L   
Sbjct: 13  RILAYGLLVLAAMLVVALTLVGTTQFGSRFIGDFVASLMSKPNRIIAVDG---ISGLLDG 69

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-NFYLSSKGV 121
            +    I +          +I+ LS+    L L+S       +      L    L ++  
Sbjct: 70  HLRVDTITVSDANGA--YGRIQDLSIDWSPLALMSRRFEASQIKAASLTLARKPLPAEET 127

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS-DLNLQISARFLNIISPL 180
           +      +   +  ++ +E++ V   R++     +     L  ++  +  +         
Sbjct: 128 ATEASSSNGFSLPVDIRIERVSVPEIRLEQPLLGTAAKLALDGNVEAERGSEANQQSITS 187

Query: 181 SIDSIKGSV---IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
            +   +  +          +  +++   + A        I   +   P    + I + G 
Sbjct: 188 QLTVSRADLPQANLSARLAYAPQQNRLDVDAILQEPKGGILANLLQLPDDPALAITVKGG 247

Query: 238 LFWNEKQPIYSGVFS 252
              N+ +   +    
Sbjct: 248 GPINDWKGSLAATLD 262


>gi|300113828|ref|YP_003760403.1| hypothetical protein Nwat_1148 [Nitrosococcus watsonii C-113]
 gi|299539765|gb|ADJ28082.1| protein of unknown function DUF748 [Nitrosococcus watsonii C-113]
          Length = 997

 Score = 43.7 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 98/304 (32%), Gaps = 34/304 (11%)

Query: 28  DWTDFREDFE-RQATLIVGKKIAV-----KGGIKIHILPFPSVFFKDIRIDQKEDGSFES 81
            W  FR+       +  +G +        +G +++ +    +     + +  K+      
Sbjct: 243 PWKYFRDQVAFEIISGRIGGRANYTLERQEGALQLSLD-GVTFALTQLGLKPKKGDREIL 301

Query: 82  KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW--------------FQR 127
            I         L      I V  +Y+   HL  +++ +GV NW                 
Sbjct: 302 TIPKFGFSGGQLRWPEKIIGVKFVYMGGTHLRAWMNKQGVLNWQKLFKNKTAEKKMTDST 361

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187
            ++        ++KI V+     + D+ ++    L+  +L +    +  I  L  D    
Sbjct: 362 ANSPSSSWRAAIKKIKVENVSASLQDRTTEPSAALNVSDLGLQLINVTTIPGLKSDFNLQ 421

Query: 188 -SVIAEGTGNFDNKRSAFKITANFPAKNKAIS-------LKIQLFPLAYPIIIDLFGNLF 239
             +  +G         A   +A+     + +S       L   L        +++ GN+ 
Sbjct: 422 FHLNKQGQFLARGHVMALPPSADLEIHLEPLSLLPFQPYLNRFLKLKLISGNLEVKGNIA 481

Query: 240 W----NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
           +    N     + G  ++    ++   L+        +  F+    ++  SR  + +I  
Sbjct: 482 YAQSNNAPNLQFKGKLALQKFATEDTLLDKRLLAWD-NLKFEQVLVDLFPSRIHIANIAL 540

Query: 296 NSST 299
           ++  
Sbjct: 541 DAPY 544


>gi|320101907|ref|YP_004177498.1| hypothetical protein Isop_0354 [Isosphaera pallida ATCC 43644]
 gi|319749189|gb|ADV60949.1| hypothetical protein Isop_0354 [Isosphaera pallida ATCC 43644]
          Length = 1420

 Score = 43.7 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 37/328 (11%), Positives = 85/328 (25%), Gaps = 38/328 (11%)

Query: 29  WTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID------QKEDGSFESK 82
                   E Q       ++ + G     I P   V   ++ ++        +DG     
Sbjct: 59  PDWIARRIEAQIDA----RVRLDG---WWIGPN-GVGLTNLILEPLTPPVDAQDGDRIVA 110

Query: 83  IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV---SNWFQRKSTMDMIHNVIL 139
           ++ ++++  +  LL+G +    + +           +G         R+S          
Sbjct: 111 VDSIALQGRWGDLLAGRLSSTVLTLSGVKTTLRFDEEGHLLSPLPAFRESLDPQTDFTPP 170

Query: 140 EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN 199
             I ++   + +I     + +    L      R  +++  L  + + G+   +G  N D 
Sbjct: 171 ALIRLERADLTLIQGSRSEHFQPVALEATPGPRGWSLVGGLENERL-GTWTLDGFINEDF 229

Query: 200 KRSAFKIT---------------ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
                                  A     +    L      L   +     G+    E Q
Sbjct: 230 STIRLTARGRSLPLHRIYPTLPLAPPEIWDDFQPLSSLQSMLLEIVWDGSDGDAAGGENQ 289

Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
              S         S       +       G   I+   + +    L ++           
Sbjct: 290 GELSYRIEADLTESSWSFPRAAMTGRARDGGLLITPTTIELRSVTLDTLG--GQLKVGGT 347

Query: 305 TKVSQDEENLLNFSENGAESMHDLNETD 332
             +S++       +   +    DL    
Sbjct: 348 LDLSRNPSPG---TVRLSAINLDLQRVP 372


>gi|68171470|ref|ZP_00544856.1| hypothetical protein EchaDRAFT_0403 [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88658243|ref|YP_507001.1| hypothetical protein ECH_0176 [Ehrlichia chaffeensis str. Arkansas]
 gi|67999111|gb|EAM85776.1| hypothetical protein EchaDRAFT_0403 [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88599700|gb|ABD45169.1| conserved hypothetical protein [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 880

 Score = 43.7 bits (101), Expect = 0.052,   Method: Composition-based stats.
 Identities = 58/376 (15%), Positives = 116/376 (30%), Gaps = 24/376 (6%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKKIAVKGGIKIH-ILPF 61
           R+LI  G    V L+     P FI+W   +     +Q   I G  ++VKG  K+   L  
Sbjct: 2   RLLIYSGGTILVFLLFLIISPFFINWNSYYASHVLKQIEDISG-DVSVKGVGKVTGRLIL 60

Query: 62  PSVFFKDIRIDQKEDG----SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLS 117
           P +   ++ I+   +          I  L ++   L LL    +V  + ID  ++     
Sbjct: 61  PKIVINNLYIEGHGNELLNHKSTILISRLELKISLLSLLLFSPKVNAITIDGLNIPLGNL 120

Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII-DQESDQVYFLSDLNLQISARFLNI 176
                       +     N  ++  +V    +    D  S     +S  +  I       
Sbjct: 121 LD--------LFSSFQSKNFNIKTFNVFNSVVNTSYDGTSFNSKPISIKSGTIKTVSDMK 172

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
           +    +   K         + + +    +I AN  +++  ++L       A+  +I   G
Sbjct: 173 VINGLLSIGKNDYNVVADISLNEEH---RINANIYSQSTKVTLSGVAAGNAFDGVILTNG 229

Query: 237 N-LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
           +           +   S+    +      LS     L   F+++D  +     +      
Sbjct: 230 SDFSQFINDISETNKTSIFSFINSHEEFSLSTNIKLLDKTFELNDFKLSTDSMEG-IGKV 288

Query: 296 NSSTDEDNKTKVSQ---DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
             S        +     D + L            D    D+      +N N ++K    +
Sbjct: 289 ICSNYASCSANIDFSRIDVDRLYGVKHESDVYRKDSRTLDYLNTLISENLNYNIKASAKE 348

Query: 353 YSVNKKEEKDNSHDKE 368
              + +   +   D E
Sbjct: 349 IKYHDQVSSNLIMDLE 364


>gi|292489597|ref|YP_003532487.1| hypothetical protein EAMY_3134 [Erwinia amylovora CFBP1430]
 gi|292898183|ref|YP_003537552.1| exported protein [Erwinia amylovora ATCC 49946]
 gi|291198031|emb|CBJ45134.1| putative exported protein [Erwinia amylovora ATCC 49946]
 gi|291555034|emb|CBA23097.1| Uncharacterized protein ytfN [Erwinia amylovora CFBP1430]
          Length = 1257

 Score = 43.7 bits (101), Expect = 0.053,   Method: Composition-based stats.
 Identities = 42/324 (12%), Positives = 88/324 (27%), Gaps = 22/324 (6%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL  D  +F    +     I+G+K+ + G   I I             +  + + 
Sbjct: 214 ALFAKPLLPDLPEFVLPLDVNVQQILGEKLRISGDSNIAINRLLLRAKTERNRLQLQALD 273

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
           +D  +          LS        L+  + V  +  ++  +      +  +      S 
Sbjct: 274 VDSPQGQLNAQGEATLSGSWPLNFTLNSALNVEPLKGEKIKMTLGGGLRDTTKLALNLSG 333

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                     ++ V G  + +  Q     + L       +A+F       S +      +
Sbjct: 334 PLRAQLDADSQLAVAGLPLNMRLQSPQLRWPLDG-----AAQFQASNVNFSFNGQATDYV 388

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    +      T     K       +  L   A     DL   L    K   +  
Sbjct: 389 MSLKAALQGEGLP-PATLTLDGKGNVAQFSLDKLRLAALQGNTDLTA-LIDWSKAISWRS 446

Query: 250 VFSVAGDFSKLLNLELSA---KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT- 305
             +++G  +     +  A    K    G+       +R+   KL+  + N++   D    
Sbjct: 447 ELTLSGINTAKQYPDWPAKLEGKITTRGSLYGGSWQMRVPELKLKGNVRNNAVSADGSLS 506

Query: 306 --KVSQDEENLLNFSENGAESMHD 327
               +Q +   +            
Sbjct: 507 GNSYNQWDIPGIKLVLGRNNLNLK 530


>gi|300715063|ref|YP_003739866.1| conserved uncharacterized protein YtfN [Erwinia billingiae Eb661]
 gi|299060899|emb|CAX58006.1| conserved uncharacterized protein YtfN [Erwinia billingiae Eb661]
          Length = 1257

 Score = 43.7 bits (101), Expect = 0.054,   Method: Composition-based stats.
 Identities = 39/328 (11%), Positives = 85/328 (25%), Gaps = 30/328 (9%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL  D  DF    +     I+G+++ + G   I +             +  + + 
Sbjct: 214 AMFAKPLLPDLPDFNMPLDVDVQEILGEQLRITGDTDITVNRLLVKAKTQDKLLHLETLN 273

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
           +D  +          LS        L+  + V  +  ++  +      +   N     S 
Sbjct: 274 VDSPQGQLNAQGQATLSDNWPVNFTLNSTVNVDPIKGEKIKMTLDGGLREQLNMALNLSG 333

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISA----RFLNIISPLSIDSIK 186
              +            G  ++ D        +    L+       ++       S     
Sbjct: 334 PVQVQM---------DGNTRLADVGLPLSVNVKSPQLRWPLTGEIQYEVDNFNFSFKGKA 384

Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNLFWNEKQP 245
                        +      T     K       +  L   A    IDL   + W++   
Sbjct: 385 TDYAMSLKAALKGQGIP-PATVALDGKGNIEQFSLDKLRLAALEGNIDLTALVDWSK-AI 442

Query: 246 IYSGVFSVAGDFSKLLNLELSAKK---SRLSGNFKISDGNVRISRYKLQSILPNSSTDED 302
            +    +++G  +     +  AK        G+       +R+   KL+  +  ++   D
Sbjct: 443 SWRSDLTLSGINTAKQYPDWPAKLEGHISTRGSLYGGSWQMRVPELKLRGNVKQNAVTAD 502

Query: 303 NKT---KVSQDEENLLNFSENGAESMHD 327
                   +Q +   L            
Sbjct: 503 GSLYGNSYNQWDIPGLKLVLGRNNINLK 530


>gi|238787566|ref|ZP_04631364.1| hypothetical protein yfred0001_20850 [Yersinia frederiksenii ATCC
           33641]
 gi|238724353|gb|EEQ15995.1| hypothetical protein yfred0001_20850 [Yersinia frederiksenii ATCC
           33641]
          Length = 1253

 Score = 43.3 bits (100), Expect = 0.057,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 105/344 (30%), Gaps = 47/344 (13%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71
            F  PL  D  DFR   +     I G+++ + G   + I             +    + I
Sbjct: 211 LFAKPLLPDLPDFRLPLDLNIKEISGQQLRLTGDTDVLISSVLLRATTQDNRITLDTLDI 270

Query: 72  DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVF-------DMYIDQP---HLNFYLSSKGV 121
              + G        L+ +     +++  + +         + +       L   L+  G 
Sbjct: 271 KSPQGGLSAHGEAQLADKWPLSMVVNSALNIEPLKGEKVKLTVGGALREQLKVDLNLSGP 330

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +      T      + L  + ++  +++      +  + L +L +  + +  +    + 
Sbjct: 331 VSAQLAAETALAQAGLPLA-LTLQSKQLRWP-LSGEPQFQLDNLRMHFNGQATDYALSIR 388

Query: 182 IDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDLF 235
            D             +G GN +      ++       N  ++  +     +++  ++ L 
Sbjct: 389 SDFKGTDLPPAVFTLDGKGNVEQFNLT-RLRLAALQGNTDLTGVVDWSKAISWNSVLTLS 447

Query: 236 G---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281
           G      W E      G     G             L L+ + K++R++    ++    G
Sbjct: 448 GINTAKQWPEWPAKLDGKIVTRGSIHGGSWQLQVPELTLDGNVKQNRVTARGSLTGNAAG 507

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
              I   KL      ++ D       +  +   L+ + +  +  
Sbjct: 508 QWHIPGIKLALGR--NNLDVKG----NLGDNWQLDANVDAPQLD 545


>gi|296116292|ref|ZP_06834908.1| hypothetical protein GXY_10857 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295977111|gb|EFG83873.1| hypothetical protein GXY_10857 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 1395

 Score = 43.3 bits (100), Expect = 0.059,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 87/277 (31%), Gaps = 23/277 (8%)

Query: 12  LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71
            F ++LVGA       +    R + ER+   + G  + + G +         +      +
Sbjct: 34  AFMLILVGA-------NTGMGRHEIERRLPGLTGGSVRMTG-LSGRFPDSLRIA----HL 81

Query: 72  DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTM 131
           +  +       I+ L++      LL     V D+ I +  +               + + 
Sbjct: 82  ELNDYRGTWLAIDDLALDWSPTRLLLRRAVVDDISIARLSIPRLSEEDPAHQSPPSRDSS 141

Query: 132 DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIA 191
           D +H      + ++   I  ID  +      +  +L   AR  +I   L+  S+     A
Sbjct: 142 DNVHM----GVDIRHAHIARIDVGAPLARLPATFSLDGHARLADIAPVLNGISVATLPAA 197

Query: 192 EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVF 251
           +             ++         ++L +         +    G L         +   
Sbjct: 198 DINLQVQRLDQPGTVSVRTQLGRGTLALDVHAHEEKNGFL----GTLSGLPMLAPLNLDM 253

Query: 252 SVAGD---FSKLLNLELSAKKSRLSGNFKISDGNVRI 285
            V+G     +  + ++  A ++ + G   +    +++
Sbjct: 254 HVSGPRDQSTLAVAIQAGAAQAHIDGRVGLVHHAMQL 290


>gi|156766050|ref|NP_612429.2| protein AHNAK2 [Homo sapiens]
 gi|172045740|sp|Q8IVF2|AHNK2_HUMAN RecName: Full=Protein AHNAK2
          Length = 5795

 Score = 43.3 bits (100), Expect = 0.061,   Method: Composition-based stats.
 Identities = 45/344 (13%), Positives = 104/344 (30%), Gaps = 38/344 (11%)

Query: 49   AVKGGI---KIHILPF---PSVFFKDIRIDQKEDGSFE---SKIEGLSMRAEFLPLLSGE 99
            +++G +    + I P      +    + +   E    E    K     ++     +   +
Sbjct: 1366 SMQGDLKTTDLSIQPPSTDLELQAGQLDVKLPEGPVPEGAGLKGHLPKLQMPSFKVPKVD 1425

Query: 100  IRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159
            ++  ++ I  P L+       V+      S   +  +V      + GGR++     +D+ 
Sbjct: 1426 LKGPEIDIKGPKLDLKDPKVEVTAPDVEVSLPSVEVDVEAPGAKLDGGRLEEDMSLADKD 1485

Query: 160  YFLSDLNLQISAR--------FLNIISPLSIDSIKGSVIAEGTG-NFDNKRSAFKITANF 210
                D   ++                   S+D     V A+ +  +      A  ++   
Sbjct: 1486 LTTKDSKFKMPKFKMPSFGVSAPGKSIEASVDVSAPKVEADVSLPSMQGDLKATDLSIQP 1545

Query: 211  PAKNKAIS-LKIQLFPLAYPII--IDLFGNL------FWNEKQPIYSG-VFSVAGDFSKL 260
            P+ +  +   ++ +     P+     L G+L       +   +    G    V G    L
Sbjct: 1546 PSADLEVQAGQVDVKLPEGPVSEGAGLKGHLPKVQMPSFKMPKVDLKGPQIDVKGPKLDL 1605

Query: 261  LNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEE-------- 312
               ++      +  +    + +V+  R KL            +K   ++D +        
Sbjct: 1606 KGPKVEVTAPDVKMSLSSMEVDVQAPRAKLDGAQLEGDLSLADKAVTAKDSKFKMPKFKM 1665

Query: 313  NLLNFSENGAESM--HDLNETDFFEEEEKKNKNDDLKKDDIQYS 354
                 S  G       D++E     +    +   DLK  D+   
Sbjct: 1666 PSFGVSAPGKSIEASVDVSEPKVEADVSLPSMQGDLKTTDLSIQ 1709


>gi|186473138|ref|YP_001860480.1| hypothetical protein Bphy_4318 [Burkholderia phymatum STM815]
 gi|184195470|gb|ACC73434.1| protein of unknown function DUF748 [Burkholderia phymatum STM815]
          Length = 1268

 Score = 43.3 bits (100), Expect = 0.063,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 77/332 (23%), Gaps = 26/332 (7%)

Query: 49  AVKGGIKIHIL-----PFPSVF----FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE 99
            +   + +  +     P   +       DI +   E  +       L + A+ L  L   
Sbjct: 266 KLSSDLNVTFVMTEDAPTLRITGTTDLADIDVLD-EHKAPFFAARSLHVAAQTLEPLKSV 324

Query: 100 IRVFDMYIDQPHLNFYLSSKG-----VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQ 154
            R  D+ +D P ++      G      +      +      +         G        
Sbjct: 325 YRFDDIRLDSPTVHLARDKSGVLSVQRTFAPAPAAGQQKAASAPAVASGASGASGASGAA 384

Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214
            +D    +  L+LQI    L   S   +D    +     +    N               
Sbjct: 385 AADAAKAVPPLDLQIKHFAL---SDGVVDMQDEAASRPVSAGLSNLAVTLDDFTTLGKTP 441

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274
              +L  ++        + + GNL    K          A        L+       L G
Sbjct: 442 ARYTLNTKVQNHRQST-LAVTGNLTLAAKTADAKIDLKSAELPVLQPYLDTVTSAKVLDG 500

Query: 275 NFKIS---DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL--- 328
              +    + N       LQ                   +  +       +    DL   
Sbjct: 501 TLSVQSALNANWSKEPVDLQIGESQIDLQALKLAAAGAKQAAIAIADGKASIKHVDLAAR 560

Query: 329 -NETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359
             E D  +          LK   I  +     
Sbjct: 561 KAEIDGVDLTGLSVDAQRLKDGTIDLAALAAP 592


>gi|171696292|ref|XP_001913070.1| hypothetical protein [Podospora anserina S mat+]
 gi|170948388|emb|CAP60552.1| unnamed protein product [Podospora anserina S mat+]
          Length = 927

 Score = 43.3 bits (100), Expect = 0.063,   Method: Composition-based stats.
 Identities = 27/252 (10%), Positives = 68/252 (26%), Gaps = 26/252 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFRE--DFE----RQATLIVGKKIAVKGGIK 55
           +RR LI +  L     V    +  ++    ++     E           GK++ +   + 
Sbjct: 106 MRRTLIIVAGLLISAWV--VGLFFYVSHKSYKPASQIEHDPQATVVQGTGKQVTLDQVMG 163

Query: 56  IHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
            +           I   +  DG     +            L        + ++       
Sbjct: 164 SYW----RAESHSISWIESPDGEDGLLL------------LKDGPGKDFLVVEDVRTQNS 207

Query: 116 LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
                  +    ++ +    +          GR+    ++  +V   ++L       F  
Sbjct: 208 AGVNAAVDVASSRTLIKE-RHFDFGGQTHTPGRV-WPSKDLKKVLIATNLEANWRHSFYA 265

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
                 +D      +  G  N   + + +  T++  A  +  +L ++       + I   
Sbjct: 266 SYWVFDVDMQIAEPLIPGEPNVRVQLAQWSPTSDAIAYVRDNNLFLRSLKHDKVVQITKD 325

Query: 236 GNLFWNEKQPIY 247
           G        P +
Sbjct: 326 GGAEVFNGVPDW 337


>gi|262277707|ref|ZP_06055500.1| putative membrane-bound pili assembly protein Fimc [alpha
           proteobacterium HIMB114]
 gi|262224810|gb|EEY75269.1| putative membrane-bound pili assembly protein Fimc [alpha
           proteobacterium HIMB114]
          Length = 275

 Score = 43.0 bits (99), Expect = 0.071,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 40/102 (39%), Gaps = 3/102 (2%)

Query: 9   LGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKD 68
              L ++++ G +    F      +   E +AT    +++ +   +KI  L    V  K+
Sbjct: 4   FIILITLIVGGVYFFAEFKADNIAKNIIESEATKAAEREVKID-NLKIDFL-KEQVTLKN 61

Query: 69  IRIDQKEDGS-FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
           I I   +       KI+ + +      ++S  + +  + ++ 
Sbjct: 62  ITIKNNDGFPGDLLKIKDVKIITNLKSVISDTVEIKLVDLNG 103


>gi|91762803|ref|ZP_01264768.1| possible membrane-bound pili assembly protein Fimc [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|91718605|gb|EAS85255.1| possible membrane-bound pili assembly protein Fimc [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 237

 Score = 43.0 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 20/188 (10%), Positives = 72/188 (38%), Gaps = 18/188 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++ L  +        +  + +  FI     +   E   +  + +++++K  + I  L  
Sbjct: 1   MKKFLSIITIF----TLSFYILVEFIGDRLIKNILEDNISSSLNREVSIK-KLSIDYLSG 55

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL----- 116
                 +I+I  K+     ++++ + +  +   + S +I + D+ ++  +LN+Y      
Sbjct: 56  -EARANNIKILNKKFDGNLAEVDFVKVNLDTFSIFSNDILINDVQLNNINLNYYFKFSDR 114

Query: 117 -----SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII--DQESDQVYFLSDLNLQI 169
                      +   + +         ++ +  K   + ++  D + ++ + ++D+N + 
Sbjct: 115 ITSDNLRNLQQDLEFKNTDSQSSKYFNIKNLDAKNINLAVLSSDFDFEKTFTINDMNFKD 174

Query: 170 SARFLNII 177
                +  
Sbjct: 175 IGNTKDSK 182


>gi|300771540|ref|ZP_07081415.1| penicillin-binding protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300761529|gb|EFK58350.1| penicillin-binding protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 694

 Score = 43.0 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 25/262 (9%), Positives = 83/262 (31%), Gaps = 13/262 (4%)

Query: 38  RQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS 97
            +     G  + ++           +V FK++ +   +     + I+  ++     PLL 
Sbjct: 52  EKMDKKYGVDLKIQ---YYGFKGLATVVFKNVYVT-PKGKDQLAHIDDFAVSVRIWPLLF 107

Query: 98  GEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----RKSTMDMIHNVILEKIHVKGGRIKIID 153
           G++++  + +++ +         +SN+      +                +  G +K + 
Sbjct: 108 GDVKIGQIEMNKANFTLIK-KDSISNYDFLFKKKNKDSTDTPKAEKNLASLADGILKQVF 166

Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213
            +  +   + D  +            +    I G    +     ++  + + +       
Sbjct: 167 FKIPRNMDVQDFEVSFRDDSTYQRLRIPRAEISGG-DIDAALFLNDNDAQWNVAGYVNPD 225

Query: 214 NKAISLKIQLFPLAYPII-IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
            + ++LK+           +     +  +  +  +     V     ++L L        L
Sbjct: 226 RQELNLKLSSEQKDTEFPFLKSKFGVRLSFDEIEFDLN-KVDRKGKEMLTLRGDWHFKNL 284

Query: 273 S-GNFKISDGNVRISRYKLQSI 293
              ++++SD ++ +    L+  
Sbjct: 285 KVHHWRLSDQDINLPEATLEGG 306


>gi|217977781|ref|YP_002361928.1| hypothetical protein Msil_1618 [Methylocella silvestris BL2]
 gi|217503157|gb|ACK50566.1| conserved hypothetical protein [Methylocella silvestris BL2]
          Length = 1197

 Score = 43.0 bits (99), Expect = 0.076,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 59/199 (29%), Gaps = 5/199 (2%)

Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189
           T        ++++ +  GRI + D+ S+Q      +NL            LS+D   G  
Sbjct: 243 TSPDSQIAAVDRVGITRGRIVVDDRTSNQKMTFDGVNLAFDKTDAGTRFTLSVDGPNGRW 302

Query: 190 IAEGTGNFDN---KRSAFKI-TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQP 245
            A G  +      +R  F +   +      A  ++        P+   +   L  +    
Sbjct: 303 SASGLASGQPGADRRLTFSLENLSIDEILLATGVRSIGADFDMPLSAHVNVGLRADGVLS 362

Query: 246 IYSGVFSVAGDFSKLLNLELSAKKSR-LSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
                F +   + +  +          + G      G  RI    ++ +   S       
Sbjct: 363 EAVATFGLGSGYLRFDDPNDEPMLVDEIKGGVHWDGGQRRIVVDPVRLVAGQSHGAVSGF 422

Query: 305 TKVSQDEENLLNFSENGAE 323
             + Q E +   F     E
Sbjct: 423 IALPQREGDAWTFELGAPE 441


>gi|313497640|gb|ADR59006.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 357

 Score = 43.0 bits (99), Expect = 0.079,   Method: Composition-based stats.
 Identities = 38/360 (10%), Positives = 99/360 (27%), Gaps = 20/360 (5%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R  L+GL  L  +++     +P  +     R+    +   +   +  V   + +      
Sbjct: 6   RWPLVGLASLIVLLVALHLALPYLV-----RDYLNDKLADMGDYRGQVA-DVDLAWWRG- 58

Query: 63  SVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           +     ++I +              + +   +  L   +  V ++    P LNF      
Sbjct: 59  AYQINGLKIVKTTGKVPVPFLDAPLIDLSVSWHSLWYDKAVVAEVTFVHPELNFVDGGSK 118

Query: 121 VSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
            ++   + +        +  + L ++ +  G +   +  S     L    L  S R L  
Sbjct: 119 QASQTGQGTDWRQQLEKLLPITLNEVRIDNGVLTFRNFNSKPPVDLKATRLNASIRNL-- 176

Query: 177 ISPLSIDSIKGSVIAEGTGNFDN-KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
            + +     +     EGT       +   + T +  +       +++   +    + D  
Sbjct: 177 -TNVRDQQGRRDASFEGTALIAGDAKVESRATFDPFSDFDDFEFRLRATGIELRKLNDFA 235

Query: 236 ---GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQS 292
              G   +N                       L            + + +    R   ++
Sbjct: 236 SAYGKFDFNAGHGDVVIEAQAENGRLNGYIKPLLRDVDVFDWQQDVEEKDKGFFRSVWEA 295

Query: 293 ILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQ 352
           ++  + T   N+ K        L+ S    +                +  N   ++   +
Sbjct: 296 LVGATETVLKNQPKNQFATRVELSGSVRKQDVSAFEAFLQILRNGFVQAFNARYEQPAPK 355


>gi|171913098|ref|ZP_02928568.1| hypothetical protein VspiD_18000 [Verrucomicrobium spinosum DSM
           4136]
          Length = 1387

 Score = 43.0 bits (99), Expect = 0.083,   Method: Composition-based stats.
 Identities = 49/386 (12%), Positives = 111/386 (28%), Gaps = 42/386 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLF---IDWTDFREDFERQATLIVGKKI--AVKGGIKI 56
           L+RVL+G+  L  +V++  F  PL    +DW               G ++   + G +  
Sbjct: 24  LKRVLLGITALVLLVVI--FHRPLLRWGVDWGAH------HFAGKAGYQLDWQLDGPV-- 73

Query: 57  HILPFPSVFFKDIRIDQKEDGS-FESKIEGLSMRAEFLPLLS--GEIRVFDMYIDQPHLN 113
                      D+R+   +       +++        + LLS  G   V    I    + 
Sbjct: 74  ----ITGFKLGDVRVVGPQGAVLQSIELKNAGAEYNLVKLLSRGGGRFVDRFEISDAVVV 129

Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
             L ++         +    + +V L+ + ++   ++ I Q+      L +L L +    
Sbjct: 130 LDLRNQKPRTEPLPSTQRKSLPDVWLDDLALRNVTVRAITQDG--EILLKNLTLVLKQGQ 187

Query: 174 LNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
              +    +   + S+  E            ++  N   +++ I L+         I   
Sbjct: 188 TGELRIEELVVPQRSLHIE------------QVRGNTALQDRWIRLQDLQVMPDLTIQKL 235

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK---- 289
                   E         S      +         +  LS +  ++   +     +    
Sbjct: 236 AVNLSQLREGDLPLELELSSGTSRLQTKGSLKGVGRENLSLDLDLTVDQLEDGELRRWVA 295

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKD 349
           L   +                E + L        +   +   D F+ ++  N    +K  
Sbjct: 296 LPVGMTWQVNRLAGHVSGLPGEPHSLTADLALHATSF-ITGQDGFKVDD-LNTRLTMKSG 353

Query: 350 DIQYSVNKKEEKDNSHDKENQENFSG 375
            ++      +   N      Q +   
Sbjct: 354 RLEIHDAVIKAGRNLLKLSGQADLPP 379


>gi|85711212|ref|ZP_01042272.1| Uncharacterized conserved secreted protein [Idiomarina baltica
           OS145]
 gi|85695125|gb|EAQ33063.1| Uncharacterized conserved secreted protein [Idiomarina baltica
           OS145]
          Length = 583

 Score = 43.0 bits (99), Expect = 0.089,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 39/114 (34%), Gaps = 4/114 (3%)

Query: 8   GLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67
           GLG  F V+        LF+D    +  FE+    + G ++ V   +     P   +   
Sbjct: 10  GLGAFFVVLGTLVLLSWLFLDT-ILKFTFEQTLGRLNGAEVNVA-EVSHQWSP-VRLTLT 66

Query: 68  DIRIDQKEDGS-FESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
            ++I           + E +S       L+ G + +  + +    L     S G
Sbjct: 67  GVQITDPNQPELNRVQAERISGDVSLSELILGRVLMEQLDVTGVRLAQKRESPG 120


>gi|321470168|gb|EFX81145.1| hypothetical protein DAPPUDRAFT_242649 [Daphnia pulex]
          Length = 263

 Score = 42.6 bits (98), Expect = 0.095,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 70/222 (31%), Gaps = 19/222 (8%)

Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197
             +   ++ G  +  D E+       D +        +I   +      G + A+ +G+ 
Sbjct: 53  DFQYEDIEAGDFQYEDIEAGDFPSDIDGDFSGDFEAGDINGDMF-----GDIDADLSGDI 107

Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII-----DLFGNLFWNEKQPIYSGVFS 252
           D               +  +S   +   +   +       D  G+L  N +   + G F 
Sbjct: 108 DGDLFGDIDADLSGDIDGDLSGDFEANDIDGDLSGNFEAGDFDGDLSGNFEAGDFDGDFQ 167

Query: 253 VAGDFSKLLN--LELSAKKSRLSGNFKISDGNVRIS-RYKLQSILPNSSTDEDNKTKVSQ 309
                +  ++  L  + +   LSG+      +   +   +   +  + S D D   +   
Sbjct: 168 YKDFEAGDIDGELSGNFEAGDLSGDIDGDFKSSDFNVDLRFGDLNGDLSGDFDGDFQ--- 224

Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
                 N      +   D +  DF  + +  + + +L+  ++
Sbjct: 225 --SGDFNVDLRFGDLNGDFS-GDFDSDFQSGDFDAELQSGNL 263


>gi|303237890|ref|ZP_07324445.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
 gi|302481917|gb|EFL44957.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
          Length = 1722

 Score = 42.6 bits (98), Expect = 0.095,   Method: Composition-based stats.
 Identities = 34/351 (9%), Positives = 104/351 (29%), Gaps = 36/351 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW----TDFREDFERQATLIVGKKIAVKGGIKIH 57
           +R+ +  L  +    ++    + + +          +     A+   G +I+++    + 
Sbjct: 25  MRKSMKWLIAIVLAPILLFIILLVLLYLPPVQNWAVKQVASYASEKTGLEISLE---HVS 81

Query: 58  ILPFPSVFFKDIRIDQKEDGSF-----ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL 112
           +     +  +  ++ +  D         + ++ L +  + +PL S ++ +  +       
Sbjct: 82  LSFPLDLKLEGFKMLRPNDSIPQRRDTVADVKELLVDVQLIPLFSNQVEIDKLTFKNLKA 141

Query: 113 N-------FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGG--RIKIID--------QE 155
           N         +                     IL    +  G   I + D        ++
Sbjct: 142 NTMDYIGDLQIRGDLQRLQLTAHGIDLNNSAAILNSAEMADGFLDIALNDTMPKDTTKKK 201

Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215
           +     +  LNL  +A  L++     +   K    A    N D  + ++++  +   ++ 
Sbjct: 202 TLWKINVEKLNLYNTALKLHMPGDTMVVGAKFGRAALTKTNIDLLKKSYRVQ-SLNWQSG 260

Query: 216 AISLKIQLFPLAYPIIIDLFGN---LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
            ++  +     A         +   L        Y      A   +     +     + L
Sbjct: 261 MLTYDMIYQKRAKQGFDAAHISMTDLNLGVDSLAYDSTGIAANIRTANFKEKSGLIVNDL 320

Query: 273 SGNFKISDGNVRISR--YKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321
             NF++      ++    ++ +     +   D      ++       + +G
Sbjct: 321 RTNFRLDANRFYLTPLYLRMPNTELRGNFIMDLNAFADKNPG-KFKINLDG 370


>gi|312173774|emb|CBX82028.1| Uncharacterized protein ytfN [Erwinia amylovora ATCC BAA-2158]
          Length = 1240

 Score = 42.6 bits (98), Expect = 0.097,   Method: Composition-based stats.
 Identities = 42/324 (12%), Positives = 87/324 (26%), Gaps = 22/324 (6%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL  D  +F    +     I+G+K+ + G   I I             +  + + 
Sbjct: 197 ALFAKPLLPDLPEFVLPLDVNVQQILGEKLRISGDSNIAINRLLLRAKTERNRLQLQTLD 256

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
           +D  +          LS        L   + V  +  ++  +      +  +      S 
Sbjct: 257 VDSPQGQLNAQGEATLSGSWPLNFTLISALNVEPLKGEKIKMTLGGGMRDTTKLALNLSG 316

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                     ++ V G  + +  Q     + L       +A+F       S +      +
Sbjct: 317 PLRAQLDADSQLAVAGLPLNMRLQSPQLRWPLDG-----AAQFQASNVNFSFNGQATDYV 371

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    +      T     K       +  L   A     DL   L    K   +  
Sbjct: 372 MSLKAALQGEGLP-PATLTLDGKGNVAQFSLDKLRLAALQGNTDLTA-LIDWSKAISWRS 429

Query: 250 VFSVAGDFSKLLNLELSA---KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT- 305
             +++G  +     +  A    K    G+       +R+   KL+  + N++   D    
Sbjct: 430 ELTLSGINTAKQYPDWPAKLEGKITTRGSLYGGSWQMRVPELKLKGNVRNNAVSADGSLS 489

Query: 306 --KVSQDEENLLNFSENGAESMHD 327
               +Q +   +            
Sbjct: 490 GNSYNQWDIPGIKLVLGRNNLNLK 513


>gi|238783543|ref|ZP_04627565.1| hypothetical protein yberc0001_8870 [Yersinia bercovieri ATCC
           43970]
 gi|238715598|gb|EEQ07588.1| hypothetical protein yberc0001_8870 [Yersinia bercovieri ATCC
           43970]
          Length = 1261

 Score = 42.6 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 42/345 (12%), Positives = 109/345 (31%), Gaps = 47/345 (13%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL  +  DFR   + Q   I G+++ + G   + I             +    + 
Sbjct: 218 ALFAKPLLPELPDFRLPLDLQIKSISGQQLRLTGDTDVLISSLLLQASTQDQRITLDTLE 277

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVF-------DMYIDQP---HLNFYLSSKG 120
           I   + G        L+ +     +++  + V         + +D      L   L+  G
Sbjct: 278 IKSPQGGLSAQGEATLADKWPLSMVVNSTLNVEPLKGEKVKLTLDGALREQLKVALNLSG 337

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +             + L  + ++  +++      +  Y + +L ++++ +  +    +
Sbjct: 338 PVSAQLDAEASLAQVGLPLA-LTLQSKQLRWP-LAGESEYQIDNLRMRLNGQATDYALSI 395

Query: 181 SIDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDL 234
             +          +  +G GN +      ++       N  ++  +     +++  ++ L
Sbjct: 396 RAELKGSDLPPAVLTFDGKGNIEQFNLT-RLRLAALQGNTDLTGVVDWSKAVSWNSVLTL 454

Query: 235 FG---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD--- 280
            G      W E     SG     G             L L+ + K++R++    ++    
Sbjct: 455 SGINTAKQWPEWPAKLSGKIVTRGSIHGGSWQLQVPELTLDGNVKQNRVTARGSLTGNAA 514

Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
           G   I    L      +  D         +++  L+ + +  +  
Sbjct: 515 GQWHIPGINLALGR--NKLDVRG----DLNDQWQLDANIDAPQLD 553


>gi|307295019|ref|ZP_07574861.1| protein of unknown function DUF490 [Sphingobium chlorophenolicum
           L-1]
 gi|306879493|gb|EFN10711.1| protein of unknown function DUF490 [Sphingobium chlorophenolicum
           L-1]
          Length = 1400

 Score = 42.6 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 38/357 (10%), Positives = 93/357 (26%), Gaps = 55/357 (15%)

Query: 26  FIDWTDFREDFERQATL---IVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82
           F++    ++   RQ        G  I V G I+  I    ++   ++ +   +     + 
Sbjct: 44  FLNTQPGKKFLIRQIAALKLESGMAIEV-GRIEGSIYSDMTIR--NLVLRDPKGI--FAV 98

Query: 83  IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKI 142
              + +       ++  I V    ++ P +    S     N  +      ++ ++ ++  
Sbjct: 99  SPEVHVVWSPFRYINNHISVR--LLESPLVVLARSP--RFNITKTDPNAPILPDLDIDVD 154

Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202
            +K GR  +      Q   +                             +G  +  + R+
Sbjct: 155 RLKIGRFLVAKPVIGQKREI---------------------------AIDGVTHIADGRA 187

Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262
                A   + +    L+  L  +     + + G L   +   I     +++G       
Sbjct: 188 ILSANAVVDSGD---RLQAHLDAVPAQNRLSMRGTLTAPKNGVIA----AMSGLTDGFTA 240

Query: 263 LELSAKKSRL-SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321
                   +  +G    + G   ++   L           D            L F+   
Sbjct: 241 TLDGRGTWQAWNGRLIATSGKGELANIAL--------AARDGNFTAKGPLRPGLVFAGTV 292

Query: 322 AESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378
                   + D F     +  N          S   +   D    + +        +
Sbjct: 293 DRLTTPALDVDLFAGLNARRVNLKGTLKSPALSATAQGLVDLGQSRFSALRIDAALL 349


>gi|32474762|ref|NP_867756.1| hypothetical protein RB7309 [Rhodopirellula baltica SH 1]
 gi|32445301|emb|CAD75303.1| hypothetical protein RB7309 [Rhodopirellula baltica SH 1]
          Length = 1315

 Score = 42.6 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 43/339 (12%), Positives = 98/339 (28%), Gaps = 27/339 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFID-WTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           ++R    +  L    ++G    P  I      R    R           V     + I  
Sbjct: 77  MQRKRTLVLVLLVFAILGIGAFPSLISHSPMGRSLLVRTL-DAYDLDANVD---SMQIGW 132

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEI---RVFDMYIDQPHLNFYLS 117
              +  + + +  +  GS    ++ L        L SG+    +  ++ +    L+  + 
Sbjct: 133 LTPLQIRGLHLVGRTSGSE-ITVDDLQTSISLSNLWSGDPQAGQFGEVLVRGVQLSCTVD 191

Query: 118 SKGVSNWFQ-----RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSD--LNLQIS 170
             G ++  Q        T +    +    + ++   I+  D  + Q + LS    N  + 
Sbjct: 192 -NGTTSIEQDLAKLLAPTGEPSSFIPRGTVKLQDLEIRATDAATSQTWTLSQSHANAVLD 250

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
           A  L++     +    G     G G+            N  A  + ++++I    L   +
Sbjct: 251 ASLLDVTFDGVLSQPGG-----GDGSLAGHVKLAMDPGNVSADGERLAVEIDADSLPLSV 305

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
           +  +      +E     +G         K   +   + +  L          V       
Sbjct: 306 LTLVQRRFPSSELPTAITGDV-----SGKTQLILTGSGEPNLVLRQLYVRNLVAADAQTG 360

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLN 329
           + +  N     D   ++     N    +     +   +N
Sbjct: 361 RKLWDNELATFDGDLQIRGGRVNARQIAAKTDFASVQMN 399


>gi|304413351|ref|ZP_07394824.1| hypothetical protein REG_0395 [Candidatus Regiella insecticola
           LSR1]
 gi|304284194|gb|EFL92587.1| hypothetical protein REG_0395 [Candidatus Regiella insecticola
           LSR1]
          Length = 1253

 Score = 42.6 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 46/344 (13%), Positives = 97/344 (28%), Gaps = 46/344 (13%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71
            F  PL     DF    + Q   I+ ++I +KG   + I  F          V   D++I
Sbjct: 210 FFATPLLPKLPDFSLPLDIQIKEILAQQIRIKGDQDVLITHFLLKGSTQGQQVQLDDLQI 269

Query: 72  DQKED----GSFESKIEGLSMRAEFLPLLS-GEIRVFDMYID-----QPHLNFYLSSKGV 121
              +         +      +       L+   ++   + +      +  L   L+  G 
Sbjct: 270 KSPQGELSAKGNLTLAGKWPLDIVANSTLNIAPLKEEKIKLKLAGDLRGQLALALNLSGS 329

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +      T      + L    ++  +++      D+ Y L++ N++   +  +    L 
Sbjct: 330 VSAQLTAKTQLSEIGLPL-SATLQSQQLRWP-LTGDKQYQLNNFNMRFDGKMTDYALSLR 387

Query: 182 IDSIK-----GSVIAEGTGNFDN---KRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
            D             EG G+                       +  +  +       +  
Sbjct: 388 SDFQGLDLPSAQFTLEGKGDLAQFYLTALNLAALQGNAHLTGRVDWRNAINWHQILTVSG 447

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKI------------SDG 281
           +     W        G  +  G  S+  + ++   +  L+GN K             S G
Sbjct: 448 INTEKQWPAWPAKLDGKITTQGSVSRDGHWQMQIPELTLNGNIKQKQLTARGAISGNSAG 507

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
              +    L      +S +         D+   L+ S +  E  
Sbjct: 508 QWHVPAINLALGR--NSLNIKG----DLDKNWALDASLDAPELN 545


>gi|123440787|ref|YP_001004778.1| hypothetical protein YE0406 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122087748|emb|CAL10533.1| putative exported protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 1259

 Score = 42.6 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 43/344 (12%), Positives = 108/344 (31%), Gaps = 47/344 (13%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71
            F  PL  D  DFR   + Q   I G+++ + G   + I             +    + I
Sbjct: 217 LFAKPLLPDLPDFRLPLDLQIKEISGQQLRLTGDTDVLITSLLLQASTQDNRITLDTLDI 276

Query: 72  DQKEDG----SFESKIEGLSMRAEFLPLLS-GEIRVFDMYID-----QPHLNFYLSSKGV 121
              + G       +  +   +       L+   ++   + +      +  LN  L+  G 
Sbjct: 277 KSPQGGLSARGEATLADTWPLSITVNSALNIAPLKGEKVKLTVGGGLREQLNVALNLSGP 336

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +      T      + +  + ++  +++      +  + L +L ++++ +  +    + 
Sbjct: 337 VSAQLEAETALAQAGLPMA-LTLQSKQLRWP-LSGEPQFQLDNLRMRLNGQATDYALSIR 394

Query: 182 IDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDLF 235
            D             +G GN +      ++       N  ++  +     +++  ++ L 
Sbjct: 395 SDFKGTDLPPAIFTLDGKGNVEQFNLT-RLRLAALQGNTDLTGVVDWSKAISWNSVLTLS 453

Query: 236 G---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281
           G      W E      G     G             L L+ + K++R++    ++    G
Sbjct: 454 GINTAKQWPEWPAKLDGKIVTRGSIHGGSWQLQVPELTLDGNVKQNRVTARGSLTGNAAG 513

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
              I    L      +  D         ++  LL+ + +  +  
Sbjct: 514 QWHIPGINLALGR--NKLDVKG----DLNDNWLLDANVDAPQLD 551


>gi|157964429|ref|YP_001499253.1| hypothetical protein RMA_0490 [Rickettsia massiliae MTU5]
 gi|157844205|gb|ABV84706.1| hypothetical protein RMA_0490 [Rickettsia massiliae MTU5]
          Length = 892

 Score = 42.2 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 53/382 (13%), Positives = 133/382 (34%), Gaps = 33/382 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M++++  G+   FS++L   F    F+++           T  +G      G IK++  P
Sbjct: 17  MIKKIAAGVIICFSLLLFIMFGALSFVNYNS----VTNNFTSHLGIAKENIGKIKMNKFP 72

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +  + IR         +  +E + +      L+    ++  + I         S+  
Sbjct: 73  LSYLVIETIR------EEGKLDLEQIKIHFSLWSLIKFNPKINKIDILDAKFY---SNSN 123

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
           V N +  +  +       L+ I++    + II+++   +   ++  L+      +     
Sbjct: 124 VLNIYNHEELIKNFFKYKLQNINLNVTNLSIINKQDYSILNFNNCILKKENALSSNYIFK 183

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITAN------------FPAKNKAISLKIQ-LFPLA 227
           +  +  G +        D    +  I  N                + +   +I+ L  + 
Sbjct: 184 ATSNYIGKISGSINKRDDIVEFSLNIGNNDYGFKLSQIYKDSKLTSGSGEYQIKNLASVM 243

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDF--SKLLNLELSAKKSRLSGNFKISDGNVRI 285
           Y I+ DL        +    +  F+++ +    +L ++ +++     +G   I+  +   
Sbjct: 244 YNILPDLNHLFNKFNQHEAVNVKFNISNNEDAIELKDIVIASSFIIGNGFVNIAKNDNIT 303

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEE---NLLNFSENGAESMHDLNE--TDFFEEEEKK 340
           +  KL     +  +      +V+ +         F++   ++   +NE      EE EK 
Sbjct: 304 TNVKLDFPKIDLRSLISPNAEVTFNTSSSNIRFIFADKLLKADVAINEIILSNNEELEKI 363

Query: 341 NKNDDLKKDDIQYSVNKKEEKD 362
             + +L K  ++ +      K 
Sbjct: 364 VFSSNLSKGTLKINEFSGNIKS 385


>gi|332702391|ref|ZP_08422479.1| hypothetical protein Desaf_1245 [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332552540|gb|EGJ49584.1| hypothetical protein Desaf_1245 [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 307

 Score = 42.2 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/275 (10%), Positives = 71/275 (25%), Gaps = 42/275 (15%)

Query: 2   LRR-----VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKI 56
           ++R     +L     L  +VL+     P    W                      G +++
Sbjct: 12  MKRRIPTILLYAGFGLAVLVLLAMIKFP----WPVLAGRLTSTVNA--------SGVVRL 59

Query: 57  HI-------LPFPSVFFKDIRIDQK-EDGSFESKIEGLSMRAEFLPLLSGEI-RVFDMYI 107
                     P P +  + + +    +  +       + +   +L  L G+         
Sbjct: 60  SYLVATPSCFP-PGLVLEGVALTSAQDPDTPLFTASRVRLTPAWLSFLVGKTGVKLRAEA 118

Query: 108 DQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG---------GRIKIIDQESDQ 158
               L   +++ G+++       + +    +     +           GRI +    S  
Sbjct: 119 YGGELRGRITADGITSPENFVVDLSLDDLDLSRHPQLAEQAGAQGLLSGRISLAGPLSGS 178

Query: 159 VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS 218
              L + +L +++      S      +      +    + N R   +        +    
Sbjct: 179 QALLGNADLAVTSGAARYKSDFLTRDVVRLGKVQADLTWLNGRLGVE-RLAMAEGDLQGE 237

Query: 219 LKIQLFPLAY-----PIIIDLFGNLFWNEKQPIYS 248
           LK    P           + + G+L          
Sbjct: 238 LKGSFQPGQGGKPLSGGKLTVDGSLLVEPSLLHLD 272


>gi|118602126|ref|YP_903341.1| hypothetical protein Rmag_0070 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567065|gb|ABL01870.1| hypothetical protein Rmag_0070 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 266

 Score = 42.2 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/267 (10%), Positives = 77/267 (28%), Gaps = 28/267 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++   L  L  ++   A  V +  D    ++  ++ A  ++   + +        L  
Sbjct: 1   MKKIGYFLIGLIVIL---ALIVTVAFDPMG-KKYAQQYAQNLLKIPVTIS-QFSTSFLDK 55

Query: 62  PSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS- 118
             +    I++    + +      ++   ++      +S  I + ++  D        +  
Sbjct: 56  -RLNIDFIKVKNPPNFNNKYAFSLDHFVLKIS-DESISDLIVIDELSFDGISFVLEQNKT 113

Query: 119 ---------------KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
                           G +     +        + + + +V    +KI  +   +   + 
Sbjct: 114 NVNLVTLIDNLDKTSSGTTFSLSEEIQNIGNKRIKINQFYVTNITLKIDTKWLKETIKVP 173

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF---KITANFPAKNKAISLK 220
           ++NLQ       I        +   V+       + K       +I      K +  S+K
Sbjct: 174 NINLQKFGGGSGIALSQVGQELMTVVLKNIKDALEKKGIELGKKEIKETLMHKLRVDSIK 233

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIY 247
            +         ++  G      K    
Sbjct: 234 EKFNLDKIKDSLNFSGTEELQNKAKDL 260


>gi|308270566|emb|CBX27178.1| hypothetical protein N47_A12070 [uncultured Desulfobacterium sp.]
          Length = 1091

 Score = 42.2 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 88/276 (31%), Gaps = 35/276 (12%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           ++  K+I ++   +     +   L  + + + L    + +  + +  P +       G  
Sbjct: 266 TLGLKNIAVNDTNN-LPFIRFSKLLFKIDDIQLPEKSVHLSAINLTSPEVYIRRDKSGEL 324

Query: 123 NWF----------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
           N               +T     ++ ++++ +KGG + + D     V  +  +N      
Sbjct: 325 NLESVIPKTNTKGSETNTETQTFSLKIDQVELKGGILNLSD-----VLAVDTVNFLADNL 379

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA-KNKAISLKI---------- 221
            L+  +   I S     +   +G    K  A   T + P  +   +++KI          
Sbjct: 380 NLSANNISYIQSQNKPPVFHASGTLGLKNIAVNDTKSLPLVRLSELTVKIADIKLPERNA 439

Query: 222 ---QLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL-SGNFK 277
               +   +  + I        N +Q +        G  +K     +   K  L SG F 
Sbjct: 440 HLSAIDLTSPEVYIRRDKAGELNSEQILKKINAENTGAKTKSKPFPVKIDKVELKSGVFS 499

Query: 278 ISDGN----VRISRYKLQSILPNSSTDEDNKTKVSQ 309
            SD +    V +    L     +  T    K  +S 
Sbjct: 500 FSDVSTTDPVNLVADNLIISANDIDTTAGGKADLSF 535


>gi|220905217|ref|YP_002480529.1| hypothetical protein Ddes_1955 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869516|gb|ACL49851.1| hypothetical protein Ddes_1955 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 1070

 Score = 42.2 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/222 (9%), Positives = 59/222 (26%), Gaps = 20/222 (9%)

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF---P 225
             +        +   ++ GS           K     +  +     ++   ++ +     
Sbjct: 638 WFSGDGADGGQMDFTNLPGSFSLRMDAERSLKPDGLHVQTSGRFSGQSSRNELSVSEAHI 697

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF---------SKLLNLELSAKKSRLSGNF 276
               +      +L   +  P + G  S                 L++  S  +  +   F
Sbjct: 698 NVLGVEAHGQASLASGKDGPFWQGKLSAYSPDIARTLRMAGMGRLSVPPSLNRIEVEARF 757

Query: 277 KISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEE 336
           + +   + +   + +       +       V   E+  LNF  N  +   D     +   
Sbjct: 758 RGTPDTLTLREIRAK----TDQSVITGTLNVDWREQPALNFKLNADQINLDR----YMST 809

Query: 337 EEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378
                     K+ D ++    + + + S  +     F+   +
Sbjct: 810 APAGKSKAGSKEWDFRFMRAFRAQGEMSVTRLTVMRFTVQNL 851


>gi|227536339|ref|ZP_03966388.1| penicillin-binding protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227243715|gb|EEI93730.1| penicillin-binding protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 694

 Score = 42.2 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/262 (9%), Positives = 83/262 (31%), Gaps = 13/262 (4%)

Query: 38  RQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS 97
            +     G  + ++           +V FK++ +   +     + I+  ++     PLL 
Sbjct: 52  EKMDKKYGVDLKIQ---YYGFKGLATVVFKNVYVT-PKGKDQLAHIDDFAVSVRIWPLLF 107

Query: 98  GEIRVFDMYIDQPHLNFYLSSKGVSNWFQ----RKSTMDMIHNVILEKIHVKGGRIKIID 153
           G++++  + +++ +         +SN+      +                +  G +K + 
Sbjct: 108 GDVKIGQIEMNKANFTLIK-KDSISNYDFLFKRKNKDSTDNPKAEKNLAALADGILKQVF 166

Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213
            +  +   + D  +            +    I G    +     ++  + + +       
Sbjct: 167 FKIPRNMDVQDFEVSFRDDSTYQRLRIPRAEISGG-DIDAALFLNDNDAQWNVAGYVNPD 225

Query: 214 NKAISLKIQLFPLAYPII-IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRL 272
            + ++LK+           +     +  +  +  +     V     ++L L        L
Sbjct: 226 RQELNLKLSSEQKDTEFPFLKSKFGVRLSFDEIEFDLN-KVDRKGKEMLTLRGDWHFKNL 284

Query: 273 S-GNFKISDGNVRISRYKLQSI 293
              ++++SD ++ +    L+  
Sbjct: 285 KVHHWRLSDQDINLPEATLEGG 306


>gi|330813259|ref|YP_004357498.1| putative membrane-bound pili assembly protein Fimc [Candidatus
           Pelagibacter sp. IMCC9063]
 gi|327486354|gb|AEA80759.1| putative membrane-bound pili assembly protein Fimc [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 269

 Score = 42.2 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 48/114 (42%), Gaps = 8/114 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++ LI L  L   +L+    +  F D    +     + ++  G+++++ G I  + L  
Sbjct: 1   MKKFLIYLSILIFAILI---FLKFFFDP-IAKSIISERLSVDTGREVSL-GKINTNFL-K 54

Query: 62  PSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113
            S+  K+I+I           + I  +  + +   L SG I    +  +  +LN
Sbjct: 55  GSIQIKNIQIKNSPIFSRENLATISSIEGKLKLDMLTSGIINFSKISFENINLN 108


>gi|126657819|ref|ZP_01728972.1| hypothetical protein CY0110_13181 [Cyanothece sp. CCY0110]
 gi|126620759|gb|EAZ91475.1| hypothetical protein CY0110_13181 [Cyanothece sp. CCY0110]
          Length = 140

 Score = 42.2 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 37/99 (37%), Gaps = 3/99 (3%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66
           I +      ++   +T   F          E+Q + ++ + I +    ++    F S+  
Sbjct: 28  IIIATTSVTLVFIGYTGLSFFLREYLPPWLEKQLSKVIYRPIEIG---ELEGFSFTSLQL 84

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDM 105
           +D  I +  + S + + E + +    L +L       ++
Sbjct: 85  EDAYIPETTEYSSQLRAETIKVTFNPLTILLQRKLAVNI 123


>gi|127513101|ref|YP_001094298.1| hypothetical protein Shew_2173 [Shewanella loihica PV-4]
 gi|126638396|gb|ABO24039.1| protein of unknown function DUF490 [Shewanella loihica PV-4]
          Length = 1299

 Score = 42.2 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 47/343 (13%), Positives = 105/343 (30%), Gaps = 21/343 (6%)

Query: 45  GKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFD 104
              + ++G I   +     +  + +++D  E          LS R +    L G++ V  
Sbjct: 537 QYPLRLQGDI--SLNDKFQLNAEHLQLDALESQLT------LSGRVDDAWALDGQLSVPA 588

Query: 105 MYIDQPH----LNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR-IKIIDQESDQV 159
           + +  P     +   ++  G        +            I V   + I     +    
Sbjct: 589 LSLWDPSASGAIKAVINVSGDDE-HPEVAINADTIEFKYADITVDKAKLIAFYRPQDAHQ 647

Query: 160 YFLSDLNLQISAR---FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216
           + LS  +  I  +     ++      D  K  +  +  G+     S          +  A
Sbjct: 648 FALSLKSSGIKGQGMALSDLTLGFKGDIAKQKLGLQTYGDLQLNTSIASTFDEKTQRFDA 707

Query: 217 ISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGV---FSVAGDFSKLLNLELSAKKSRLS 273
              +I L      + +D   +L+W+ K          +        L +      K    
Sbjct: 708 KIKRISLNSRLGAMALDEPFDLYWDNKHAKGEISPFCWRHDAASLCLTDTAELGDKGDTR 767

Query: 274 GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
             F    G +       +++     T  D + + ++  +     +   A    DL  T  
Sbjct: 768 LQFAGDLGALLAPVLP-ENLKWRGPTQLDGELQWAKGAKPTGQLTLAMAPGQFDLTTTKR 826

Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGD 376
             E +    N   + D++Q +++ + E +     ++Q   S D
Sbjct: 827 HIEAQYHYLNLTARLDELQLAIDTQLESERFAKIDSQLTISTD 869


>gi|21241318|ref|NP_640900.1| hypothetical protein XAC0547 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21106643|gb|AAM35436.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 813

 Score = 42.2 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 35/355 (9%), Positives = 92/355 (25%), Gaps = 39/355 (10%)

Query: 31  DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE----------DGSFE 80
            F      Q   +  +++ ++G  ++ +  F  +    + I                   
Sbjct: 223 QFDRIVAEQVQAVSLRQLHIEGQGQLQLGLFKRLRGGPMEIFPSRAVFESTRVRWGQDEV 282

Query: 81  SKIEGLSMRAEFL----------PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
            +   L + A              +L     +  ++ D   L+    ++G      R   
Sbjct: 283 MRNGQLRIEASIARHAPEQASGQAVLQFTDALIAVHGDTAALDVARDAQGRHTLATRPGK 342

Query: 131 MDMIHNVILEKIHVKGG-----RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
                 +   +  ++ G     R  + D    Q   L +L  Q+       ++    +  
Sbjct: 343 GRADGELRWIRGALQPGSQLQWRAPLHDGTRAQAALLGELTAQLQVDQNMRLTVSMPEPA 402

Query: 186 KGSVIAEGTGNFDNKRSAF-KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
              +  +       ++     + +  P  +    L  QL  L++                
Sbjct: 403 DAGLTLDADVRVQGRQLPVQSMRSLLPRTSGHARLHWQLSSLSW-----------IAALF 451

Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
           P      ++ G+     +L +   +       ++     ++      +I   +S D    
Sbjct: 452 PDVD-WLTLEGEGLVDADLRIDRGQLGAGSRLQVPHVQAQVGVM-GHAITGQASADLRVD 509

Query: 305 TKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKE 359
              +      L          H    T  F +      +   + D    +  +  
Sbjct: 510 ADANGQLLPALALQMQQFSIAHTDAPTRPFVQGRDLRLDLKTRADARNLASLRDA 564


>gi|126665505|ref|ZP_01736487.1| hypothetical protein MELB17_22970 [Marinobacter sp. ELB17]
 gi|126630133|gb|EBA00749.1| hypothetical protein MELB17_22970 [Marinobacter sp. ELB17]
          Length = 911

 Score = 42.2 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/339 (8%), Positives = 79/339 (23%), Gaps = 40/339 (11%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           S     +      +       + L +      +    + +  + +     N   +  G  
Sbjct: 506 SASVTGLETRLPGNSQPLLAWQTLQLAPIEYNVNPARLEIGRVTLIDLAANIIRNDDGSH 565

Query: 123 N------------WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
           +                 +  +      + ++ +    +   D+            LQ +
Sbjct: 566 DITNLLTLAPAGKPAAADANENQGFIFRIGELQLDNADVDYTDRTLKPELTTRFGQLQGN 625

Query: 171 ARFLNIISPLSID-SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
              L+ I P     S+KG V   G  +     +           +  ++L+    P   P
Sbjct: 626 LSGLSNIPPQQGRVSLKGKVNQVGNLDMSGSIATL---GTDQQSDLVLNLENLELPRLSP 682

Query: 230 I------------IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
                         +DL  +      +   S    +             A    +     
Sbjct: 683 YSGRYLGYGIAGGKLDLKLDYQLQGTRINASNQIILNRLELGQPMPSEQAVGVSIKLGLA 742

Query: 278 ISDGNVRISRYKLQS-ILPNSSTDEDNKT-------KVSQDEENLLNFSENGAESMH--- 326
           +      +    +           +  K         +++   +        A+      
Sbjct: 743 LLRDGNNVIELNVPVNGDLADPEFQMGKVMMRAFVNVLTKAATSPFALIGTLADIAGLGG 802

Query: 327 -DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS 364
             + +  F     +  +    K   +   +N+K E   S
Sbjct: 803 EQMQQVSFAPGGVELTEASTQKLAALAQVLNQKPELILS 841


>gi|190573517|ref|YP_001971362.1| putative penicillin acylase 2 [Stenotrophomonas maltophilia K279a]
 gi|190011439|emb|CAQ45057.1| putative penicillin acylase 2 precursor [Stenotrophomonas
           maltophilia K279a]
          Length = 775

 Score = 42.2 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/387 (7%), Positives = 94/387 (24%), Gaps = 55/387 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR    +  +   +++    V   +      +     A   + + + ++          
Sbjct: 1   MRRTWRWVLGVLVAIVLVTALVLWLLLRGSLADLDGEHALPGLARPVTIERD-------- 52

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
                  + I           +  +  +  +           +M + +       S+ G 
Sbjct: 53  ---ALGVVTITATSQADAMRALGRVHAQERYF----------EMDLMR------RSAAGE 93

Query: 122 SNWFQRKSTMDMIHNVILEKIHVK---GGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
            +       +D    + + ++  +     +  + D       ++  +N  ++   +   +
Sbjct: 94  LSALFGPKAIDADKRMRVHRLRARTEANMQAALGDNVEAVSAYVGGVNEGLAGLSVRPWA 153

Query: 179 PLSIDSIKGSVIAE----------GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
            L +        A                   ++   ++        A+   I      +
Sbjct: 154 YLLLRQSPQPWQASDSVLTGLAMYADLQDPGNQTELALSRIRAVVPPALYALIAHDGTEW 213

Query: 229 --PIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
             P+  +  GN    +   +            +     + +    ++G        +   
Sbjct: 214 DAPLFGEPTGNAALPDASQLDLRTLHAKPGTEQEEADVIGSNNFAVAGALTADGRAIVAD 273

Query: 287 RYKLQSILP----------NSSTDEDNKTKV---SQDEENLLNFSENGAESMHDLNETDF 333
              L    P                  +  V   S      +    NG  +    N    
Sbjct: 274 DMHLGLRAPGLWFRVRLRYPDPQAAGGQVDVTGFSLPGLPAVIVGSNGHVAWGFTNSYID 333

Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKKEE 360
             +   +  N  +   + + +V  + +
Sbjct: 334 TADYRTEPANAAVTVHEERIAVAGQAD 360


>gi|254457287|ref|ZP_05070715.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
 gi|207086079|gb|EDZ63363.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
          Length = 1198

 Score = 42.2 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 46/386 (11%), Positives = 104/386 (26%), Gaps = 55/386 (14%)

Query: 27  IDWTDFREDFERQATLIVG------KKIAVKGGIKIHIL----------PFPSVFFKDIR 70
            D   FR   +  A   +       ++  V    K+ +L             ++      
Sbjct: 445 FDIVRFRPYIDEAAQDALSVYDVKLQRATVGFDAKVSVLALEDETQVSVSDANLNLSKFA 504

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF----- 125
           I+++  G          +    L   +  + + +  +   ++   L   G  N       
Sbjct: 505 INKRSTGERLVDFADFGVNNLSLDTKAKAVNIENTTLKSLNIRTGLYKDGKLNVDNLIVA 564

Query: 126 ------------QRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYF--LSDLNLQISA 171
                       + K+  +  + V L+   ++  R+   D+         L  +N     
Sbjct: 565 KKAKTTKVATSKKSKTKDESEYRVKLKHFALQSARVSFSDKTLKPTLNTKLDRINFNAYN 624

Query: 172 RFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPII 231
                 + L+  S+   + ++G      K     +        K ISLK       +   
Sbjct: 625 IDSEKKTWLNY-SLSARLNSKGYAKAKGKLRHTPLRQTGTFDLKKISLK------EFSPY 677

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSK-LLNLELSAKKSRLSGNFKISDGN-VRISRYK 289
           I+    L  N+           A       L +      +    N    +   +  +   
Sbjct: 678 IEKDLYLKLNDGYVDLKTKVEYAKSTETADLKVNGRLDINEFFLNDSRDNSTLLSFNNMA 737

Query: 290 LQ----SILPN----SSTDEDN---KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEE 338
           L+    S+ P+    +  D +       + + +           +   D N T   + E+
Sbjct: 738 LKSFDYSMSPDRAFVNELDINGFYVNALIDETKTMNFATLSKAPKVQSDANATKVAQSED 797

Query: 339 KKNKNDDLKKDDIQYSVNKKEEKDNS 364
                   K   +  +    +  D S
Sbjct: 798 TNATKFPFKIMKLNVASGSAKFADLS 823


>gi|86359431|ref|YP_471323.1| hypothetical protein RHE_CH03849 [Rhizobium etli CFN 42]
 gi|86283533|gb|ABC92596.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 2139

 Score = 42.2 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 46/403 (11%), Positives = 99/403 (24%), Gaps = 36/403 (8%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R     +G +  + +               R   ER A+ +  + + ++      +L   
Sbjct: 13  RVTGYAVGAILVLAVAALAIFGFT--SFGARIVTERIASTLSNRDMTIEVREPEGLLTG- 69

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            +   +I +         ++I G+++    L LL+G        ID       +  K V 
Sbjct: 70  GLRAAEISLSDTRG--VFAEIHGVAIDWNPLALLTGTFHAKRFQID----TISVLRKPVR 123

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGR---IKIIDQESDQVYFLSDLNLQISARFLNIISP 179
               R +  +     +  K+ V       IK+ +  + + + L+      +         
Sbjct: 124 TLPSRPNAENSGGFALPVKVDVDHMALPDIKLAEAFAGRAFALAAEGSLSADGDGGEAMV 183

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
                            +    +  ++ A        +       P    + IDL G   
Sbjct: 184 NVSRHAVPDARLTADIAYAPAENRLRLKAQLAEPKGGLLAGFLGLPGNPAVNIDLDGQGP 243

Query: 240 WNEKQPIYSGVFS------------VAGDFSKLLNLELSAKK---------SRLSGNFKI 278
            +                       ++ D    L+L+                 +G   I
Sbjct: 244 ISNWAGKMQAALDGQQRAAIEGRHAISADGLHHLDLKGGGDLSSLLPAAFRPLFAGQTNI 303

Query: 279 SDGN--VRISRYKLQSIL-PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335
                     +  +Q+      S        +     N LN +  G     D        
Sbjct: 304 DVAATFDDRGKIDIQTGNIATGSVVIAASGALDPAGNNSLNANLLGTSGPVDFRWPLAEG 363

Query: 336 EEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378
           E        +L       +               Q +    K+
Sbjct: 364 EARFLISGLNLALTGDAQTARLSLSGSLDSATLPQADIGNVKL 406


>gi|161505086|ref|YP_001572198.1| hypothetical protein SARI_03220 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160866433|gb|ABX23056.1| hypothetical protein SARI_03220 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 1259

 Score = 42.2 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/359 (9%), Positives = 97/359 (27%), Gaps = 49/359 (13%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           +++ +G+     ++L     +                   + G  +          +P  
Sbjct: 5   KKISLGVLIFIVLLLASVAFL----------------VGTMTGLHLVFSAAN--RWVPGL 46

Query: 63  SV-----FFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
            +      ++D+ +                + +      L    + V D+ +   ++   
Sbjct: 47  EIGQVTGGWRDLSLKNIRYEQPGVAVNAGEIHLAVGLDCLWHSTLCVNDLALKDINVAID 106

Query: 116 -----LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
                 S +           +     V L ++ +    IKI D        +S L+    
Sbjct: 107 SKKMPPSEQAQEEEDSGPLNLSTPWPVTLSRVALNNINIKIDD------TTVSVLDFTSG 160

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
             + +    L    ++G +IA        ++   +     P  ++    +      A P+
Sbjct: 161 LAWQDKNLTLKPTRLQGLLIALPKVADVAQKEVVEPKIEKPQPDEKPLGETLKDLFAKPV 220

Query: 231 IIDL-FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
           + ++   +L  N     + G        + L    +  K S + GN K+   ++  ++  
Sbjct: 221 MPEMTDVHLPLNLNIESFRGEQLRVTGDTDLTVRTMLLKVSSIDGNMKLDTLDIDANQ-- 278

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGA-ESMHDLNETDFFEEEEKKNKNDDLK 347
                                    ++ + N          E    +      +  ++ 
Sbjct: 279 ---------GTVKASGTAQLANNWPVDITLNSTLNIDPLKGEKIKLKVGGALREQLEVG 328


>gi|332716399|ref|YP_004443865.1| hypothetical protein AGROH133_11933 [Agrobacterium sp. H13-3]
 gi|325063084|gb|ADY66774.1| hypothetical protein AGROH133_11933 [Agrobacterium sp. H13-3]
          Length = 333

 Score = 42.2 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 82/294 (27%), Gaps = 33/294 (11%)

Query: 6   LIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVK-GGIKIHILPF-PS 63
            + LG    V+++G +T   F      ++      +    + ++ + G I     PF   
Sbjct: 13  FLWLGI-AVVLVIGLYTAGWFYAADKLKQTVLNVISPSQARNVSGECGDIAFKGYPFRIG 71

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
           +F   + +D K++G   +    L   A+      G I      +D P     + +     
Sbjct: 72  LFCSKVTVDDKQNGV-SASFGELRSAAQVYNP--GHIV---WELDAPA---EIRTAHGLT 122

Query: 124 WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                  M       L  I                   +  L  Q  +            
Sbjct: 123 VSALWQNMQSSIVTKLRGID-------------RTSLVIDGLKAQAVSTVTGQTIDFDAA 169

Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243
             +  +   G             T           L            + L G     + 
Sbjct: 170 KTEMHLRQNGADLDGAITLTDSSTVIKDWPQLLPRLNAIAD-------VTLAGKAGMVDG 222

Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297
               +G++  +G+  +L+      +  R+SG F   +      ++KL+    ++
Sbjct: 223 S-DTAGLYGASGELRRLVADIGEGRTMRISGPFSFDNEGYLSGQFKLEIEKLDA 275


>gi|325300369|ref|YP_004260286.1| glycosyl transferase family 51 [Bacteroides salanitronis DSM 18170]
 gi|324319922|gb|ADY37813.1| glycosyl transferase family 51 [Bacteroides salanitronis DSM 18170]
          Length = 643

 Score = 42.2 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 41/110 (37%), Gaps = 3/110 (2%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGK-KIAVKGGIKIHILP 60
           ++R L   G   ++  V +      +     R   +R+   +  +  I +   + + +  
Sbjct: 1   MKRRLKQFGIWIALFTVLSGAGLFLLRGPLLRHIADRRIEALSARYGIRIA-YVSLKMPS 59

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110
             SV  + + +          ++    ++ +FLPLL G + +  +  +  
Sbjct: 60  LTSVRVEGLSMV-PFGRDTLLRLASAEVKLDFLPLLRGNLSIRKVDTEGL 108


>gi|146340339|ref|YP_001205387.1| hypothetical protein BRADO3366 [Bradyrhizobium sp. ORS278]
 gi|146193145|emb|CAL77157.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
          Length = 681

 Score = 41.8 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 31/330 (9%), Positives = 84/330 (25%), Gaps = 46/330 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV-----GKKIAVKGGIKI 56
           ++R+LI    +  + + G   VP +      +   ER+              A  G +  
Sbjct: 11  MKRILIATVAVVVLGIAGLVGVPWY-----AQSRAEREVEASFAQIRQNGATASHGKVAF 65

Query: 57  HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ------- 109
            +     +   D++++             ++            +    + +         
Sbjct: 66  DLWSR-KLTIADVKVESAAQPPASISFGAITA-MGLSQPDGDHVAASSIELSDVAMSGQM 123

Query: 110 ------------PHLNFYLSSKGVSNWFQRKSTMDMIHNVI--LEKIHVKGGRIKIIDQE 155
                       P +       G   +    +    +      +++         I+ + 
Sbjct: 124 PGPSAIRLSYKLPQIVL-KDYAGPVRFAALPAGSGPLETYRTLMQQFATISASSIILPRA 182

Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG---TGNFDNKRSAFKITANFPA 212
              +             +         D    S   +G   T +     +     A  P 
Sbjct: 183 EGTMEGGPAAAAPAEFTYSGFTIDNIKDGRIASYKLDGLAFTMSMQQPANKLAAGAGQPG 242

Query: 213 KNKAISLKIQL----FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268
           + + +  ++         A  ++  L      +++     G  +             S  
Sbjct: 243 RIEKLQGRVTDIVHHDIDANAMLAVLSPEAAKDDRVYRVYGRVTAGAYEVN----SDSGV 298

Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSS 298
           + R+ G     + +VR SR +L ++     
Sbjct: 299 RMRMEG-ISADEFSVRPSRLQLPALFAALP 327


>gi|290473311|ref|YP_003466177.1| hypothetical protein XBJ1_0228 [Xenorhabdus bovienii SS-2004]
 gi|289172610|emb|CBJ79379.1| conserved hypothetical protein; putative exported protein
           [Xenorhabdus bovienii SS-2004]
          Length = 603

 Score = 41.8 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 38/327 (11%), Positives = 100/327 (30%), Gaps = 33/327 (10%)

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P++  KD+ I   +       ++ L    + L L++G                     G+
Sbjct: 248 PAIHVKDLNITNAKLQGKNWSVDYLDTTIKNLGLVNGSWEA---------------KDGL 292

Query: 122 SNWFQRKSTMDMIHNVI-LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
            ++       +       L ++H  G    +    +     L ++  +   +   +    
Sbjct: 293 IDFNVMNMAFNNAQFSNTLGQLHFSGDTFTVAHLTTHYQKGLFNIQSEWDRKNRQLTFNN 352

Query: 181 -SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
            S+  +   +      +  N    +         +   +L I + P     +  L G++ 
Sbjct: 353 SSVTGLVYDLPPTWRNDIKNAAPGWISGLTLNDISVNNTLLIDVNPDFPFQLTTLSGHV- 411

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS---GNFKISDGNVRISRYKLQSILPN 296
            +    + +G + +    + L     +  K  ++        +D  + I +  L +   +
Sbjct: 412 -DTMNILKNGRWGLWEGQASLQAASGTFNKIEITRPYLQLHATDDRLTIDK--LNAFNGH 468

Query: 297 SSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-------EEEEKKNKNDDLKKD 349
                    +    ++     +  G  +   +     +       E         +L  D
Sbjct: 469 GLLQASGSAEQQTAQKP-FELNFKGMNADLGILPRWGWIPLTMQGEGNFSLALTGNLSAD 527

Query: 350 DIQYSVN-KKEEKDNSHDKENQENFSG 375
           DI+ ++N     +D S +K++Q    G
Sbjct: 528 DIKGTINGTLTAEDKSSNKDSQSIVQG 554


>gi|238750098|ref|ZP_04611601.1| hypothetical protein yrohd0001_6780 [Yersinia rohdei ATCC 43380]
 gi|238711642|gb|EEQ03857.1| hypothetical protein yrohd0001_6780 [Yersinia rohdei ATCC 43380]
          Length = 1246

 Score = 41.8 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 40/345 (11%), Positives = 104/345 (30%), Gaps = 47/345 (13%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL  +  DFR   + Q   I G+++ + G   + +             +    + 
Sbjct: 203 AMFAKPLLPELPDFRLPLDIQINEISGQQLRLTGDTDVLVSSVLLRANIQENHITLDTLD 262

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVF-------DMYIDQP---HLNFYLSSKG 120
           I   + G        L+ +     +++  + +         + +       L   ++  G
Sbjct: 263 IKSPQGGLSARGEAKLADKWPLTMVVNSALNIEPLKGEKVKLTVGGALREQLKVAINLSG 322

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                    T      + L  + ++  +++      +  + L +L ++++ +  +    +
Sbjct: 323 PVTAQLEAETALAQAGLPLA-LTLQSKQLRWP-LSGEPQFQLDNLRMRLNGQATDFALSI 380

Query: 181 SIDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDL 234
             D             +G GN +      ++       N  ++  +     +++  ++ L
Sbjct: 381 RSDFKGTDLPPAVFTLDGKGNVEQFNLT-RLRLAALQGNTDLTGVVDWSKAISWNSVLTL 439

Query: 235 FG---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD--- 280
            G      W E      G     G             L L+ + K++R+     ++    
Sbjct: 440 SGINTAKQWPEWPAKLDGKIVTRGSLHGGSWQLQVPELMLDGNVKQNRVIARGSLTGNAA 499

Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
           G   I    L      +  D       S  +   L+ + +  +  
Sbjct: 500 GQWNIPSINLALGR--NKLDVKG----SLADNWQLDANVDAPQLD 538


>gi|327395397|dbj|BAK12819.1| periplasmic protein YtfN [Pantoea ananatis AJ13355]
          Length = 1255

 Score = 41.8 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 41/361 (11%), Positives = 112/361 (31%), Gaps = 52/361 (14%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           ++VLIG      ++  G   +                     G  + +KG      +P  
Sbjct: 5   KKVLIGFLIFLVLLFAGLAFLIGTTP----------------GLHLVLKGAS--RWVPGL 46

Query: 63  SVF-----FKDIRIDQKEDGSFESKI--EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           S+      ++++ +           +    + +  +   LL   + V D+ +    ++  
Sbjct: 47  SINKVDGGWRNLTLSGLRYEMPGVSVNAGNIHLAVDLNCLLHSSVCVNDLTLRD--ISVV 104

Query: 116 LSSKGVSNWFQRKSTM------DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
           + SK ++                  + + L  + +    +K+ D        +S ++   
Sbjct: 105 VDSKKMTPSTAPPEEESGKTNLSTPYPITLRHVGLHNINVKVDDTA------ISLVDFTT 158

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
             ++ +    L+   I+  +IA        K    +     P  ++    +      A P
Sbjct: 159 GLQWQDRALTLNPTHIQSLLIALPKAAQVAKEQVVQPKIQQPKPDEKPLGETLQAMFAKP 218

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
           ++ +L          P +     +         L ++          ++    +     +
Sbjct: 219 LLPEL----------PDFQLPLDIDVQDIVGEQLRITGDTDITVSRLQVKAKTLD-RHMQ 267

Query: 290 LQSILPNSST-DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
           LQ++  +S+    +   + +  +   ++ + NG +   D  + +      K    D+LK 
Sbjct: 268 LQTLAVDSNLGKLNGSGQATLADNWPVDLTLNG-DVNVDPVKGEKLNLTVKGAMRDELKL 326

Query: 349 D 349
            
Sbjct: 327 A 327


>gi|167949558|ref|ZP_02536632.1| hypothetical protein Epers_25030 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 187

 Score = 41.8 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 41/135 (30%), Gaps = 16/135 (11%)

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHN--V 137
                 L +    + LL+G I V +  +    L    ++   +NW    S          
Sbjct: 1   MISARELQLSLSPMALLAGRIEVAEGRLLGADLRLERATDNANNWQFGASGGSSSGASLP 60

Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197
            + +I +    +  ++        L+ ++ ++ A               G     G   +
Sbjct: 61  EIPRIQIDDSLLSYLEDGVLHRLELTSVSGRLGA--------------TGHFELFGDVRY 106

Query: 198 DNKRSAFKITANFPA 212
            +     +   +FPA
Sbjct: 107 RSIPMNGRYVIDFPA 121


>gi|148546559|ref|YP_001266661.1| hypothetical protein Pput_1317 [Pseudomonas putida F1]
 gi|148510617|gb|ABQ77477.1| hypothetical protein Pput_1317 [Pseudomonas putida F1]
          Length = 357

 Score = 41.8 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 67/209 (32%), Gaps = 16/209 (7%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R  L+GL  L  +++     +P  +     R+    +   +   +  V   + +      
Sbjct: 6   RWPLVGLASLIVLLVALHLALPYLV-----RDYLNDKLADMGDYRGQVA-DVDLAWWRG- 58

Query: 63  SVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           +     ++I +              + +   +  L   +  V ++    P LNF      
Sbjct: 59  AYQINGLKIVKTTGKVPVPFLDAPLIDLSVSWHALWYDKAVVAEVTFVHPELNFVDGGSK 118

Query: 121 VSNWFQRKSTMDM----IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL-- 174
            ++   + +        +  + L ++ +  G +   +  S     L    L  S R L  
Sbjct: 119 QASQTGQGTDWRQQLEKLLPITLNEVRIDNGVLTFRNFNSKPPVDLKATRLNASIRNLTN 178

Query: 175 -NIISPLSIDSIKGSVIAEGTGNFDNKRS 202
                     S +G+ +  G  N +++ +
Sbjct: 179 VRDQKGRRDASFEGTALIAGDANVESRAT 207


>gi|327290092|ref|XP_003229758.1| PREDICTED: neuroblast differentiation-associated protein AHNAK-like
            [Anolis carolinensis]
          Length = 5352

 Score = 41.8 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 41/342 (11%), Positives = 105/342 (30%), Gaps = 55/342 (16%)

Query: 60   PFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPL-----------LSGEIRVFDMY 106
            P   +    + I+  E    + + K+  ++++A  + +           + G++ V    
Sbjct: 1778 PKLDIDAPAVDIEGPEGNWKTPKFKMPEMNIKAPKISMPDVDFNLRGPKIKGDVDVSAPK 1837

Query: 107  IDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIID-QESDQVYFLSDL 165
            ++ P ++             +        ++ + +  VKG + ++ D         + D+
Sbjct: 1838 LEGPDIDIK---------GPKLDIDAPGLDIEVPEGKVKGPKFRMPDMHFKTPKISMPDI 1888

Query: 166  NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
            +L +    +     +S+         +  G+                    + L+     
Sbjct: 1889 DLNLKGPKVKGDVDVSV--------PKLEGDLKGPNIDIHGP-KLDVDVPDVELEGPEGK 1939

Query: 226  LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
            L  P       +    +   +    F++ G   K    +L     +L G+ K  D +++ 
Sbjct: 1940 LRGPKFKMPDMHFKAPK-ISMPDVDFNLKGPKLKG---DLDVSVPKLEGDLKGPDFDIKG 1995

Query: 286  SRYKLQSILPNSSTDEDNKTKVSQDEENLL---NFSENGAESMHDLNETDF--------- 333
             +  + +   +     + K K+ + +       +F   G +    L + D          
Sbjct: 1996 PKLDIDAPDVDL-HGPEGKLKMPKFKMPKFGMPSFKGEGPDVDLSLPKADVDASLPKVDL 2054

Query: 334  ------FEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369
                   E  E K K    K  D+ +   K    D   + + 
Sbjct: 2055 EGPSLDVEGPEGKLKGPKFKMPDMHFKTPKISMPDIDLNLKG 2096



 Score = 41.4 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 40/353 (11%), Positives = 101/353 (28%), Gaps = 68/353 (19%)

Query: 47   KIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI----EGLSMRAEF-LPLLSGEIR 101
             + ++G      L  P     D+     +    +  +      L    +  +P L G+++
Sbjct: 3248 DVEIEGPEGK--LKGPKFKMPDLHFKAPKISMPDLDMNLKGPKLKGDVDVSVPKLEGDLK 3305

Query: 102  VFDMYIDQPHLNFYL------SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE 155
              D+ I  P L+            G     + K          +                
Sbjct: 3306 GPDVDIKGPKLDIDAPDVEIEGPDGKWKGPKFKMPDMHFKTPKIS--------------- 3350

Query: 156  SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215
                  + D++L +    +     +S+  ++G +      +    +    +      + +
Sbjct: 3351 ------MPDIDLNLKGPKVKGDVDVSVPKLEGDLKGP-NIDIQGPKLDVDV---PDVELE 3400

Query: 216  AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY-SGVFSVAGDFSKLLNLELSAKKSRLSG 274
                K++      P        L     +       F++ G   K    +L     +L G
Sbjct: 3401 GPEGKLRGPKFKMP-------ELNIKAPKISMPDVDFNLKGPKLKG---DLDVSVPKLEG 3450

Query: 275  NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLL----------NFSENGAES 324
            + K  D +++  +  + +   +     + K K+ + +              +   +  ++
Sbjct: 3451 DLKGPDLDIKGPKLDIDAPDVDL-HGPEGKLKMPKFKMPKFGMPSFKAEGPDVDVSLPKA 3509

Query: 325  MHDLN--------ETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369
              D++         +   E  E K K    K  D+ +   K    D   + + 
Sbjct: 3510 DLDVSLPKVDLEGPSLDVEGPEGKLKGPKFKMPDMHFKTPKISMPDIDLNLKG 3562



 Score = 41.0 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 42/347 (12%), Positives = 106/347 (30%), Gaps = 45/347 (12%)

Query: 60   PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL----PLLSGEIRVFDMYIDQPHLNFY 115
            P   +   D+ +   E      K +             P +   +   ++ I  P L+  
Sbjct: 2874 PKVDIDVPDVDLHGPEGKLKMPKFKMPKFGMPGFKGEGPSVDVNLPKGEVDISAPKLDIE 2933

Query: 116  LSS---KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE--SDQVYFLSDLNLQIS 170
                  +G     +         +  + KI +    + +   +   D    +   N+++ 
Sbjct: 2934 TPDLEIEGPEGKLKAPKFKKPDMHFNVPKISMPDIDLNLRGPKIKGDVEGDIKGPNVELK 2993

Query: 171  ARFLNIISP-LSIDSIKGSVIAEG-TGNFDNKRS---AFKITANFPAKNKAISLKIQLFP 225
               +++ +P + I++       +    NF   +       +    P  + +         
Sbjct: 2994 GPDIDLEAPKIDIEAKPKKSRFKLPKFNFSGPKVHTPEVDVKLKKPDVDVSGP-----KL 3048

Query: 226  LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS----DG 281
                  +DL G +             +++     + ++EL+ K  +L G+  +S    +G
Sbjct: 3049 DVQGPDVDLQGKVK---GSKFKMPSLNISSPKVSVPDVELNLKAPKLKGDLNVSSPSLEG 3105

Query: 282  NVRISRYKLQSILPNS---STDEDN---KTKVSQDEENLL-----NFSENGAESMHDLN- 329
            +++     ++    +      D      K K+ + +             N  ++  D+  
Sbjct: 3106 DLKGPDIDIKGPKLDIAAPDVDLHGPEAKLKMPKFKMPKFGMKGPEVDLNLPKADLDVTG 3165

Query: 330  -----ETDFFEEEEKK--NKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369
                 ET   E E  +   K    K  D+ + + K    D   + + 
Sbjct: 3166 PKMDIETPDLEIEGPEGKIKGSRFKMPDMNFEMPKISMPDIDLNLKG 3212



 Score = 41.0 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 39/328 (11%), Positives = 92/328 (28%), Gaps = 43/328 (13%)

Query: 60   PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
            P   +   D+ +   E      K +         P   GE    D+ +  P  +  +S  
Sbjct: 3738 PKLDIDAPDVDLHGPEGKLKMPKFKMPKFGM---PGFKGE--GPDVDVSLPKADLDVSLP 3792

Query: 120  GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
             V               +   K  +                 + D +L +    +     
Sbjct: 3793 KVDLEAPSLDVEGPEGKLKGPKFKMPDMHF------KTPKISMPDFDLSLKGPKVKGDVD 3846

Query: 180  LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
            +S+  ++G        +    +    +          + L+     L  P       N+ 
Sbjct: 3847 VSMPKLEGDFRGP-DFDIKGPKLDVDVP--------DVELEGPDAKLRGPKFKMPEMNIK 3897

Query: 240  WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
              +   +    F++ G   K    +L     +L G+ K  D +++  +  + +   +   
Sbjct: 3898 APK-ISMPDVDFNLKGPKLKG---DLDVSVPKLEGDLKGPDFDIKGPKLDIDAPDVDL-H 3952

Query: 300  DEDNKTKVSQDEENLL----------NFSENGAESMHDLN--------ETDFFEEEEKKN 341
              + K K+ + +              +   +  ++  D++         +   E  E K 
Sbjct: 3953 GPEGKLKMPKFKMPKFGMPGFKAEGPDVDVSLPKADLDVSLPKVDLEGPSLDVEGPEGKL 4012

Query: 342  KNDDLKKDDIQYSVNKKEEKDNSHDKEN 369
            K    K  D+ +   K    D   + + 
Sbjct: 4013 KGPKFKMPDMHFKSPKISMPDMDFNLKG 4040



 Score = 38.7 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 43/366 (11%), Positives = 97/366 (26%), Gaps = 66/366 (18%)

Query: 49   AVKGGIKIHI---------------LPFPSVFFKDIRIDQKED------------GSFES 81
             +KG + + +                P   +   D+ +   E             G    
Sbjct: 3914 KLKGDLDVSVPKLEGDLKGPDFDIKGPKLDIDAPDVDLHGPEGKLKMPKFKMPKFGMPGF 3973

Query: 82   KIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEK 141
            K EG  +          ++ +  + ++ P L+      G     +         +    K
Sbjct: 3974 KAEGPDVDVSLPKA-DLDVSLPKVDLEGPSLDVE----GPEGKLKGPKFKMPDMHFKSPK 4028

Query: 142  IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI----AEGTGNF 197
            I +      +   +      +S    +   +  +         I    +     EG    
Sbjct: 4029 ISMPDMDFNLKGPKLKGDLDVSAPKFEGDLKGPDFDIKGPKVDIDAPDVDLHGPEGKLKM 4088

Query: 198  DNKRSAFKITANFPAKNKAISLKI-QLFPLAYPIIIDLFG-NLFWNEKQPIYSG------ 249
               +        F A+   + + + +         +DL G +L     +    G      
Sbjct: 4089 PKFKMPKFGMPGFKAEGPDVDVSLPKADLDVSLPKVDLEGPSLDVEGPEGKLKGPKFKMP 4148

Query: 250  -------VFSVAGDFSKLLNL----ELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
                    FS+      L       ++     +L G+FK  D +++  +  +     +  
Sbjct: 4149 DMHFKTPKFSMPDIDLNLKGPKVKGDVDVSMPKLEGDFKGPDFDIKGPKLDVDVPDVDLE 4208

Query: 299  T---DEDNK--------TKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLK 347
                              K  +     +N +  G +   D++ +    E + K  + DLK
Sbjct: 4209 VPDPKLKGPKFKMPDMHFKTPKISMPDMNLNLKGPKVKGDMDVSVPKLEGDLKGPDIDLK 4268

Query: 348  KDDIQY 353
               I  
Sbjct: 4269 GPQIDL 4274


>gi|258404565|ref|YP_003197307.1| hypothetical protein Dret_0432 [Desulfohalobium retbaense DSM 5692]
 gi|257796792|gb|ACV67729.1| protein of unknown function DUF490 [Desulfohalobium retbaense DSM
           5692]
          Length = 1448

 Score = 41.8 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 79/256 (30%), Gaps = 21/256 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI-- 58
           ML+R+     F     L+    +   +     R         I     A+   I++ +  
Sbjct: 1   MLQRLFRVFIFGLVAGLLLLGGIWAGLQTEYGRSTLLHAVEYIT----ALTSPIELELEG 56

Query: 59  ----LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
                P  SV  + + +            E + +  ++  L  G +    ++  +     
Sbjct: 57  LGSGFPG-SVRLERLELADANG--TWMAAEAIGLDWDWSALWHGRLHGERLFAREIVWY- 112

Query: 115 YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
                            D     +L ++ ++   I  +    D    L+ +  Q   R  
Sbjct: 113 ------RPPQTPPDPEQDTPPWWLLSRLSLESLSIPKLTVAGDHPAALA-VKGQFDGRPE 165

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
            + + L+  +++G       G F  +++A+++T    A+ +    ++   P  +   +  
Sbjct: 166 ALRANLAAKALQGKDTLRLNGRFTPEQAAYELTLETTAEAQGPLARLTRLPGPWHGRLQA 225

Query: 235 FGNLFWNEKQPIYSGV 250
            G          + G 
Sbjct: 226 NGTRRRGSGTARFKGE 241


>gi|260820964|ref|XP_002605804.1| hypothetical protein BRAFLDRAFT_84409 [Branchiostoma floridae]
 gi|229291139|gb|EEN61814.1| hypothetical protein BRAFLDRAFT_84409 [Branchiostoma floridae]
          Length = 3776

 Score = 41.8 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 36/333 (10%), Positives = 88/333 (26%), Gaps = 44/333 (13%)

Query: 59   LPFPSVFFKDIRIDQKEDGSFE----SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
               P    K  +    +    +    + ++    + E   +   ++   D+ ++ P +N 
Sbjct: 2257 FGKPDFDIKGPKFRGPDWKMPKFGGKADVDLPEAQLEGPDV---KLEGPDVDLEGPDINL 2313

Query: 115  -YLSSKGVSNWFQRKSTMDM---------------------IHNVILEKIHVKGGRIKII 152
                +KG   W   K                            +V ++    + G + + 
Sbjct: 2314 GSPDAKGGFKWKGPKFGKPDFHMKKPTFKSPSFRWKGKKVKSPSVEIDAPSAEIGALNLE 2373

Query: 153  DQ-----ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207
                          + D+ L+        ++  S D        +    FD  ++ F+ +
Sbjct: 2374 TPGLDINAPKVSGEVPDVELESPGFKGKSMTLGSPDLELEGPTLKSPSWFDRMKAKFRGS 2433

Query: 208  ---ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLLNL 263
               +           +     L  P +     ++               V G    L   
Sbjct: 2434 GRFSGPDFNGPEAKFRTPSGNLEGPDVTINSPDMNLEGPDLDIDSPDLDVKGPDVDLKGP 2493

Query: 264  ELSAKKSRL------SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317
            ++   K R       S +F +   N++   +  +        +      +   E  +L  
Sbjct: 2494 KMKGPKFRFGKPKFKSPDFHMKGPNLKGPSFGGRLSGEFEPPNVGGDVDIGIAEAEVLVP 2553

Query: 318  SENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350
                 +   ++   +       K K+  LK  D
Sbjct: 2554 DAEIPDWDVNVEGPEVEGGLSGKFKSPKLKGPD 2586



 Score = 39.5 bits (90), Expect = 0.84,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 83/298 (27%), Gaps = 37/298 (12%)

Query: 66   FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY-----LSSKG 120
             K  R    +    +  +     +A    L  G++   ++ I+ P +N       +  +G
Sbjct: 2725 VKGGRFKMPKFKGPDFSMPKFGGKAGV-DLPEGKLEGPNVDIEGPDVNLEGPEVDVDLEG 2783

Query: 121  VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
              +    K  M  I    +    +K  +  +          +   ++ I    +N+  P 
Sbjct: 2784 -PDMKGGKFKMPKIKGPDISMPSMKMPKFGMKSNIDLPEGEVRGPSVDIEGPDVNVEGPD 2842

Query: 181  SIDSIKGSVIAEGTGNFDNKRSA-FK-ITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
                ++G  +  G       +   F   +   P       + +    +  P  +DL G  
Sbjct: 2843 VDVDLEGPDVKGGKFKMPKFKGPDFSMPSIGMPKFGGKADIDLPEGEVRGP-SVDLEGPD 2901

Query: 239  FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
               E          + G   K        K  +  G             + + SI     
Sbjct: 2902 VNVEGP---DVDVDLEGPDVKGGKF----KMPKFKG-----------PDFSMPSIGMP-- 2941

Query: 299  TDEDNKTKVSQ--DEENLLNFSENGAESMH---DLN-ETDFFEEEEKKNKNDDLKKDD 350
                 K  +     E    +    G +      D++ + +  + +  K K    K  D
Sbjct: 2942 -KFGGKADIDLPEGEVRGPSVDLEGPDVNVEGPDVDVDLEGPDVKGGKFKMPKFKGPD 2998


>gi|225166361|ref|ZP_03728039.1| hypothetical protein ObacDRAFT_5202 [Opitutaceae bacterium TAV2]
 gi|224799395|gb|EEG17946.1| hypothetical protein ObacDRAFT_5202 [Opitutaceae bacterium TAV2]
          Length = 772

 Score = 41.8 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/225 (8%), Positives = 55/225 (24%), Gaps = 23/225 (10%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
            +L  +      + +              R    +      G  +  K      + P   
Sbjct: 19  WMLWLILGAALALQIFLLVGRNIELPDFARNQLRKAIAAQ-GLDLNFK---TATLDPGGV 74

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN 123
           +    + +              L +R +   L++               +  + + GV+ 
Sbjct: 75  IVLDHVSLADARISEPLLTARSLLIRVDPGWLITRR------------SDLRVEATGVNL 122

Query: 124 WFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSID 183
                 +   +   ++E         +   + S +   +  L+ ++    L     L +D
Sbjct: 123 LLPAVVSPSGVAEPLVENA-------QFSVRLSGRHIDIHGLSARLGGVTLTASGTLDLD 175

Query: 184 SIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
           +       + +     +     I A           +     + +
Sbjct: 176 APAEPPSGQLSTAALRRLLTGAIPAARHFVTFTSKFRATGDLVTH 220


>gi|330862063|emb|CBX72229.1| uncharacterized protein ytfN [Yersinia enterocolitica W22703]
          Length = 1294

 Score = 41.8 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 43/344 (12%), Positives = 107/344 (31%), Gaps = 47/344 (13%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71
            F  PL  D  DFR   + Q   I G+++ + G   + I             +    + I
Sbjct: 252 LFAKPLLPDLPDFRLPLDLQIKEISGQQLRLTGDTDVLITSLLLQASTQDNRITLDTLDI 311

Query: 72  DQKEDG----SFESKIEGLSMRAEFLPLLSGEI-RVFDMYID-----QPHLNFYLSSKGV 121
              + G       +  +   +       L+ E  +   + +      +  L   L+  G 
Sbjct: 312 KSPQGGLSARGEATLADTWPLSITVNSALNIEPLKGEKVKLTVGGGLREQLKVALNLSGP 371

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +      T      + +  + ++  +++      +  + L +L ++++ +  +    + 
Sbjct: 372 VSAQLDAETALAQAGLPMA-LTLQSKQLRWP-LSGEPQFQLDNLRMRLNGQATDYALSIR 429

Query: 182 IDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDLF 235
            D             +G GN +      ++       N  ++  +     +++  ++ L 
Sbjct: 430 SDFKGTDLPPAIFTLDGKGNVEQFNLT-RLRLAALQGNTDLTGVVDWSKAISWNSVLTLS 488

Query: 236 G---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281
           G      W E      G     G             L L+ + K++R++    ++    G
Sbjct: 489 GINTAKQWPEWPAKLDGKIVTRGSIHGGSWQLQVPELTLDGNVKQNRVTARGSLTGNAAG 548

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
              I    L      +  D         ++  LL+ + +  +  
Sbjct: 549 QWHIPGINLALGR--NKLDVKG----DLNDNWLLDANVDAPQLD 586


>gi|260655505|ref|ZP_05860993.1| hypothetical protein GCWU000246_01466 [Jonquetella anthropi E3_33
           E1]
 gi|260629953|gb|EEX48147.1| hypothetical protein GCWU000246_01466 [Jonquetella anthropi E3_33
           E1]
          Length = 1196

 Score = 41.8 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 37/360 (10%), Positives = 97/360 (26%), Gaps = 42/360 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV-GKKIAVKGGIKIHILPF 61
           RR L GL  +  +++     +    DW        R     + G  + V     +     
Sbjct: 6   RRSLAGLCTVLIILVAACAVLLFVGDWGA--RLASRYGKQYLAGVPLDVTFD-DLRGNLG 62

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL----SGEIRVFDMYIDQPHLN-FYL 116
                  + +   + GS   +++ L      L L     S ++R   + +   +L+ F+ 
Sbjct: 63  SGYDLTGLSLR-TQSGSDVLELKDLRFGLSRLSLSPLGGSLDLRSSGLRLTAGNLSEFFK 121

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
                      K        + L  + ++  +       +D  + +  L++    +F  +
Sbjct: 122 DVDAAFPSEPEKQQEPFHSPLQLGTVLIEDWQ------GTDLPWAVERLSVAPGEKFSQL 175

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID--- 233
            + LS   +   +    + + ++      + A   +   +  L          + +D   
Sbjct: 176 EASLSWQGVPIHLSGLVSPDLNDPAGNVTVQALDASITLSGRLSEGFDVTLSGLKLDKLK 235

Query: 234 --------------LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
                         L G++     +  ++    ++G     L   +          FK  
Sbjct: 236 ELERSLEPLQLGGSLSGSVRLVPTKNGWAISGRLSGQDLAALGSLIG----SFVLPFKYD 291

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339
                +            +   D         +           +   L++    +    
Sbjct: 292 GSMASVDGASGTVFG--GALAADGTFDA---GDPNFPLFLQVKLTGARLDKAPGVKGTGA 346


>gi|294661402|ref|YP_003573278.1| hypothetical protein Aasi_1949 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|227336553|gb|ACP21150.1| hypothetical protein Aasi_1949 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 802

 Score = 41.8 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/234 (9%), Positives = 68/234 (29%), Gaps = 12/234 (5%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHI---LPFPSVFFKDIRIDQKEDGSFESKIEGL 86
                   + A   +   I     ++I +    P  S+    + I   E+ +     + +
Sbjct: 13  EQIIPKAFQAAISALKLPIN-AKHVEISLLKDFPRLSLLLHQVTIKDSENTNNILVADQV 71

Query: 87  SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK-----GVSNWFQRKSTMDMIHNVILEK 141
                 +  L G+  +  ++++Q  L+  +  +        N  +     +    V L+K
Sbjct: 72  GCVFNIIHFLKGKYILEQLFVNQGTLSIPVQKQVARTVRTDNAIEDALQANFTFPVHLKK 131

Query: 142 IHVKGGRIKIIDQESDQVYFL--SDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN 199
           + +   +     + S +   +    +  + + +  ++   +   ++   +  +       
Sbjct: 132 LVLNDVKCIYPGKLSSEQVIIHTQKIFAKFNMQNQHLSMHVKGQAVIQEIAYKPISYAST 191

Query: 200 KRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253
                     +    +  SL  +         + L G    N  +P        
Sbjct: 192 IPIYISTDIEYNLLEQVYSLH-RSTIKQSNNTLYLQGTWSPNIVKPYIDIQLKA 244


>gi|312888904|ref|ZP_07748466.1| protein of unknown function DUF490 [Mucilaginibacter paludis DSM
           18603]
 gi|311298645|gb|EFQ75752.1| protein of unknown function DUF490 [Mucilaginibacter paludis DSM
           18603]
          Length = 1703

 Score = 41.8 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 30/302 (9%), Positives = 92/302 (30%), Gaps = 29/302 (9%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L+ +L  +G +  +VL+    + +       ++         +  K+ +    ++ +   
Sbjct: 9   LKTLLWVIGIVILLVLLVLILIQVPAVQNFAKDKAVTFLQSKIKTKVKID---RLSVEFP 65

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK-- 119
             +  + +     + G      + L +    + LL  ++ + ++ +     N   +    
Sbjct: 66  KMLVLEGVYFAD-QKGDTLLAGDKLKVNITMMQLLHKKVEINEINLQGITANVVRTPDSA 124

Query: 120 -----------GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
                      G      + +         L+K+ +    IK  D  S         +  
Sbjct: 125 FNYTYIMKAFMGEQKNEPKPTDTTSTLKFSLDKVILDKINIKYNDAISGNNVKFLLGHFD 184

Query: 169 ISARFLNIISPLSIDSIKGSVIAEG-TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
              +  ++     +      +   G         +   + A      K ++L + L  + 
Sbjct: 185 TRVKNFDLD---KMKFNIPKITLAGFDATIIQTPTGPSVVAAPDTAVKPLNLTLDLGVID 241

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
                     +  N +        ++     ++  ++L  +K  +  N ++ + N ++S 
Sbjct: 242 LS-------KINVNYQGGEMKTKVNLGRLLVEMDKIDLKNQKVAIK-NIQLENTNGQLSL 293

Query: 288 YK 289
            K
Sbjct: 294 LK 295


>gi|34580600|ref|ZP_00142080.1| hypothetical protein [Rickettsia sibirica 246]
 gi|28261985|gb|EAA25489.1| unknown [Rickettsia sibirica 246]
          Length = 876

 Score = 41.8 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 45/357 (12%), Positives = 115/357 (32%), Gaps = 17/357 (4%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M++++  G+   FS++L   F    F+++           T  +G      G IK++  P
Sbjct: 1   MIKKIAAGVIICFSLLLFIMFGALSFVNYNS----VTNNFTSHLGIAKENIGKIKMNKFP 56

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +  + IR         +  +E + +      L+    ++  + I         S   
Sbjct: 57  LSYLVIETIR------EEGKLDLEQIKIHFSLWSLIKFNPKINKIDILDAKFY---SHSN 107

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
           V N +  +  +       L+ I++    + II+++   +   ++  L+      +     
Sbjct: 108 VLNIYNHEELIKNFFKYKLQNINLNVTNLSIINKQDYSILNFNNCILKKENALSSNYIFK 167

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLK-IQLFPLAYPIIIDLFGNLF 239
           +  +  G +        D    +  I  N      +   K  +L   +    I    ++ 
Sbjct: 168 TTSNYIGKISGSINKRDDIVDFSLNIDNNDYGFKLSQIYKDSKLTSGSGEYQIKNLASVM 227

Query: 240 WNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST 299
           +N    +           +  +   +S  +  +     +   +  +    +     ++  
Sbjct: 228 YNILPDLNHLFNKFNQHEAVNVKFNISNNEDEIELKDIVIASSFIVGHGFVNIAKNDN-- 285

Query: 300 DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVN 356
                 K+   + +L +     AE   + + ++       K    D+  D+I  S N
Sbjct: 286 -ITTNVKLDFPKIDLSSLISPNAEVTFNTSSSNSRFIFANKLLKADVTIDEIILSNN 341


>gi|332160051|ref|YP_004296628.1| hypothetical protein YE105_C0427 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325664281|gb|ADZ40925.1| hypothetical protein YE105_C0427 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 1281

 Score = 41.8 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 43/344 (12%), Positives = 107/344 (31%), Gaps = 47/344 (13%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71
            F  PL  D  DFR   + Q   I G+++ + G   + I             +    + I
Sbjct: 239 LFAKPLLPDLPDFRLPLDLQIKEISGQQLRLTGDTDVLITSLLLQASTQDNRITLDTLDI 298

Query: 72  DQKEDG----SFESKIEGLSMRAEFLPLLSGEI-RVFDMYID-----QPHLNFYLSSKGV 121
              + G       +  +   +       L+ E  +   + +      +  L   L+  G 
Sbjct: 299 KSPQGGLSARGEATLADTWPLSITVNSALNIEPLKGEKVKLTVGGGLREQLKVALNLSGP 358

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +      T      + +  + ++  +++      +  + L +L ++++ +  +    + 
Sbjct: 359 VSAQLDAETALAQAGLPMA-LTLQSKQLRWP-LSGEPQFQLDNLRMRLNGQATDYALSIR 416

Query: 182 IDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDLF 235
            D             +G GN +      ++       N  ++  +     +++  ++ L 
Sbjct: 417 SDFKGTDLPPAIFTLDGKGNVEQFNLT-RLRLAALQGNTDLTGVVDWSKAISWNSVLTLS 475

Query: 236 G---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281
           G      W E      G     G             L L+ + K++R++    ++    G
Sbjct: 476 GINTAKQWPEWPAKLDGKIVTRGSIHGGSWQLQVPELTLDGNVKQNRVTARGSLTGNAAG 535

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
              I    L      +  D         ++  LL+ + +  +  
Sbjct: 536 QWHIPGINLALGR--NKLDVKG----DLNDNWLLDANVDAPQLD 573


>gi|77164765|ref|YP_343290.1| hypothetical protein Noc_1259 [Nitrosococcus oceani ATCC 19707]
 gi|254434937|ref|ZP_05048445.1| conserved domain protein [Nitrosococcus oceani AFC27]
 gi|76883079|gb|ABA57760.1| Protein of unknown function DUF748 [Nitrosococcus oceani ATCC
           19707]
 gi|207091270|gb|EDZ68541.1| conserved domain protein [Nitrosococcus oceani AFC27]
          Length = 996

 Score = 41.8 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 107/332 (32%), Gaps = 41/332 (12%)

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
           +     + +  KE       +  L      L      I V  +Y+    +  +L+ +G  
Sbjct: 283 TFALTQLGLKPKEGNREILTVPKLGFSGGQLRWPEKIIGVKFIYMGGTQVRAWLNKQGAL 342

Query: 123 NW--------------FQRKSTMDMIHNVILEKIHVKGGRIKIIDQ--ESDQVYFLSDLN 166
           NW                  ++  +     ++KI V+     + D+  E      +SDL 
Sbjct: 343 NWQKLFKSKKADRKMTESTANSSSLSWRAAIKKIKVENVSASLQDRTIEPPATLNISDLG 402

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS-------L 219
           LQ+     ++    S  +++  +  +G        +A   +A+     +++S       L
Sbjct: 403 LQL-IDVTSVPGLASTFNLQFHLNKQGQLLARGHVTALPPSADLEIHLESLSLLPFQPYL 461

Query: 220 KIQLFPLAYPIIIDLFGNLFW----NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
              L        ++  GN+ +    +     + G   +    ++   L+        +  
Sbjct: 462 NRFLKLKLISGNLEAKGNVAYAQSNDAPNFQFKGDLVLQKFAAEDTLLDERFLGWE-NLK 520

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335
           F+     +  SR  + +I  ++      K  ++++++               L+     +
Sbjct: 521 FERVLVGLFPSRIHIDNIALDAPY---GKVTINENKKIN---------IKEVLSPLAGKK 568

Query: 336 EEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
           E +  + +       +  ++N    K  S + 
Sbjct: 569 ESQSADPSSTSASKPLPIAINSIRIKKGSANF 600


>gi|52425635|ref|YP_088772.1| hypothetical protein MS1580 [Mannheimia succiniciproducens MBEL55E]
 gi|52307687|gb|AAU38187.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 453

 Score = 41.8 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 72/249 (28%), Gaps = 8/249 (3%)

Query: 12  LFSVVLVGAFTVPLFI--DWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDI 69
           L   VLVG F +  F+                   G K+     +    LP P++    +
Sbjct: 5   LSVAVLVGIFALLAFLYGQKNKAETQLLTLLQKQ-GIKVN---SLDFSFLPHPTLTANKV 60

Query: 70  RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKS 129
           R    E        E ++       LL G+ ++ +M  +   +     S  V        
Sbjct: 61  RYLVPESSR-LVAFEQVAAEFSGASLLLGDFKISNMRFNDGEIRSEPQSPPVLYSLNFSL 119

Query: 130 TMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189
               ++   LE +       +++D  ++Q  +  +L  +  +      +       +G  
Sbjct: 120 KPAALYLNRLENLLHFFKTKEVLDGGNNQWLYELNLTAKNPSNDNLHFATTFKLLTRGIA 179

Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
           + +   + D     +     F      I L  Q   +              NE      G
Sbjct: 180 LKDTNASVDLNELTYSDNKQFTLTADKIYLTTQQSAVEN-YEFSAENLKLNNENLGRVQG 238

Query: 250 VFSVAGDFS 258
            +  +G   
Sbjct: 239 EWLASGINP 247


>gi|257062205|ref|YP_003140093.1| hypothetical protein Cyan8802_4475 [Cyanothece sp. PCC 8802]
 gi|256592371|gb|ACV03258.1| WD-40 repeat protein [Cyanothece sp. PCC 8802]
          Length = 1161

 Score = 41.4 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 52/387 (13%), Positives = 119/387 (30%), Gaps = 36/387 (9%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M+R   IGLG L   ++         I +T  R   ++Q     G ++   G        
Sbjct: 454 MIR---IGLGILVVSLVGA------LISFTQARSAIQKQQEAKKGSQLEQMGDSAWRQFE 504

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           F  +   D  I   E       ++ L    +   +L        + + +  L+       
Sbjct: 505 FEQL---DGLISAMEG------VQKLKTIVKDQRILKDYPATRPIIVLEQILDRIHEKNK 555

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS----DLNLQISARFLNI 176
           ++      +++    N  L       G I++ D++  Q   ++    ++     +    +
Sbjct: 556 LTGHEDAVNSVTFSPNGQLIATASSDGTIRLWDRQGRQKTVITGHKGNIYRVTFSPDGQL 615

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
           I+  S D+       +G      K     + +   + +    L       A    +    
Sbjct: 616 IASASQDNTAKVWNLQGQELMTLKGHNSSVYSVSFSPDSKHLLTTSRDDTARIWDLQGHQ 675

Query: 237 NLFWNEKQPIYS-GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
                  +     GVFS  G      + + + +     GN  +      +  +   S  P
Sbjct: 676 LAILKGHEKSIDHGVFSPDGQRIATASRDGTVRIWDNQGNL-LKILKDSVDSFYSVSFSP 734

Query: 296 N----SSTDEDNKTKVSQDEENLLNFSENGAES-------MHDLNETDFFEEEEKKNKND 344
           +    +S+ +D   ++  D +     +  G +         HD N       +      +
Sbjct: 735 DGQRLASSAKDGTVRI-WDNQGKSILTLKGHQELVKNVTYSHDGNWIATASSDGTARVWN 793

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQE 371
              ++ + +  ++    D +    +QE
Sbjct: 794 TQGQEVMVFRGHQDPVYDVAISSNSQE 820


>gi|218249119|ref|YP_002374490.1| WD-40 repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|218169597|gb|ACK68334.1| WD-40 repeat protein [Cyanothece sp. PCC 8801]
          Length = 1161

 Score = 41.4 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 52/387 (13%), Positives = 119/387 (30%), Gaps = 36/387 (9%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M+R   IGLG L   ++         I +T  R   ++Q     G ++   G        
Sbjct: 454 MIR---IGLGILVVSLVGA------LISFTQARSAIQKQQEAKKGSQLEQMGDSAWRQFE 504

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           F  +   D  I   E       ++ L    +   +L        + + +  L+       
Sbjct: 505 FEQL---DGLISAMEG------VQKLKTIVKDQRILKDYPATRPIIVLEQILDRIHEKNK 555

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS----DLNLQISARFLNI 176
           ++      +++    N  L       G I++ D++  Q   ++    ++     +    +
Sbjct: 556 LTGHEDAVNSVTFSPNGQLIATASSDGTIRLWDRQGRQKTVITGHKGNIYRVTFSPDGQL 615

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
           I+  S D+       +G      K     + +   + +    L       A    +    
Sbjct: 616 IASASQDNTAKVWNLQGQELMTLKGHNSSVYSVSFSPDSKHLLTTSRDDTARIWDLQGHQ 675

Query: 237 NLFWNEKQPIYS-GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILP 295
                  +     GVFS  G      + + + +     GN  +      +  +   S  P
Sbjct: 676 LAILKGHEKSIDHGVFSPDGQRIATASRDGTVRIWDNQGNL-LKILKDSVDSFYSVSFSP 734

Query: 296 N----SSTDEDNKTKVSQDEENLLNFSENGAES-------MHDLNETDFFEEEEKKNKND 344
           +    +S+ +D   ++  D +     +  G +         HD N       +      +
Sbjct: 735 DGQRLASSAKDGTVRI-WDNQGKSILTLKGHQELVKNVTYSHDGNWIATASSDGTARVWN 793

Query: 345 DLKKDDIQYSVNKKEEKDNSHDKENQE 371
              ++ + +  ++    D +    +QE
Sbjct: 794 TQGQEVMVFRGHQDPVYDVAISSNSQE 820


>gi|85373156|ref|YP_457218.1| hypothetical protein ELI_01645 [Erythrobacter litoralis HTCC2594]
 gi|84786239|gb|ABC62421.1| hypothetical protein ELI_01645 [Erythrobacter litoralis HTCC2594]
          Length = 1400

 Score = 41.4 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 79/297 (26%), Gaps = 32/297 (10%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93
           +    Q     G +  V G I+  +         D+ +   +      +I    M    L
Sbjct: 59  DQIA-QVAPASGLRFEV-GRIEGDLFRD--ARLYDVVLYDPKGA--FLRIPEAEMDWRPL 112

Query: 94  PLLSGEIRVFDMYIDQPHL-NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII 152
              +  + +      +  L        G  +     +    I  + +E + +  G   II
Sbjct: 113 SWFTSGLDIRTAIARRATLERLPELLPGDPDAPTLPNFDIRIDRLAIENLTIAPG---II 169

Query: 153 DQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPA 212
           D+ S +V   +  +++     +     L     +   + +     D       +    P 
Sbjct: 170 DERSHRVDLTASADIREGLADVEASGRL---GREDRFVLDLEAEPDGNVFDLDLDYVAPR 226

Query: 213 KNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS--AKKS 270
                SL              + G   W +    + G  +V  D S +    L+  A   
Sbjct: 227 DGVIASL----VGAEAGYEARVRGGGTWRD----WKGFLTVRRDDSMIGGFRLTNKAGLY 278

Query: 271 RLSGNFKISD------GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321
            L G    +             R  L        +  D   +        LN   +G
Sbjct: 279 GLVGQIDAAPLSEGLIEAAAAPRLSLAFFTTLEESVLDGALRAR---SRALNLRADG 332


>gi|313158736|gb|EFR58123.1| hypothetical protein HMPREF9720_1927 [Alistipes sp. HGB5]
          Length = 1600

 Score = 41.4 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 36/320 (11%), Positives = 91/320 (28%), Gaps = 39/320 (12%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFI----DWTDFREDFERQATLIVGKKIAVKGGIKI 56
           ML+++L        V+L+    VP  +         R      A+  +G  ++V+   ++
Sbjct: 1   MLKKILKYTFRTLLVILLVLILVPALLYIPAVQDFVRSKAVGYASRTLGMDLSVE---RL 57

Query: 57  HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
            +     +   +  +   + G        LS+     PLL  E+ V  + + +   ++  
Sbjct: 58  RLSFPLRLSVDNTLLT--DKGDTLLSCGHLSLEVAVWPLLRKEVAVRSLELAKLAAHYGD 115

Query: 117 SSKGVSNWFQRKS-------TMDMIHNVILEKIHVKGGRIKI----------IDQESDQV 159
           S+ G+                      V + +I +  G + +           D  +   
Sbjct: 116 STAGMDLKVAAGQFAVNDCRVGLPAKTVGISRIALTDGDVFLNTAESAPAEKADSAAALP 175

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG---NFDNKRSAFKITANFPAKNKA 216
           + +    L ++     + +  ++  +   +  +G               + +    +   
Sbjct: 176 WQIDVGKLTVANLVFGMRTAPAVTDLSVRL-PDGEVDSCRVLLDSRQVSVKSILLNRGGY 234

Query: 217 ISLKIQLF-PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
             L          P      G     +K              S         +   L   
Sbjct: 235 AYLTAPADAGEKAPDKTATQGKAAHPDKTAAAD------NASSPHDAAADDGEAPAL--P 286

Query: 276 FKISDGNVRISRYKLQSILP 295
           + +  G+V ++   L+    
Sbjct: 287 WTVRVGSVTLNDNSLEYGTL 306


>gi|90414680|ref|ZP_01222651.1| hypothetical protein P3TCK_23558 [Photobacterium profundum 3TCK]
 gi|90324222|gb|EAS40797.1| hypothetical protein P3TCK_23558 [Photobacterium profundum 3TCK]
          Length = 659

 Score = 41.4 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 44/426 (10%), Positives = 111/426 (26%), Gaps = 54/426 (12%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL-P 60
           +R V    G L  ++L+    +   +                    +     I  HI  P
Sbjct: 1   MRVVGKIFGTLIILMLLSITIILTLLHTQYATRLVINTIDATTNYHLK-AANISYHISDP 59

Query: 61  F--------------PSVFFKDI-------RIDQKEDGSFESKIEGLSMR-----AEFLP 94
           +              P +   +I       ++           I+ +++      A    
Sbjct: 60  WHIQLEQPQIMYQRQPLLSANNIQLWLTPTKLLNTGWSFDSILIDTITLNQPLNLATLPD 119

Query: 95  LLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMD--------MIHNVILEKIHVKG 146
           L    + + ++ +  P ++   +   + NW  R  +             N+  +   +K 
Sbjct: 120 LHVQRLALNNLTLHTPEISIEQARLQIDNWQSRSQSWGIFSGDFQLSTPNMQWQGTTLKD 179

Query: 147 GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKI 206
             + I     DQ + +  L+ +      +  +     + + +++          +   + 
Sbjct: 180 --VLIDGDYQDQNWKIYGLSFEWQHATFSGQAEYKQSATQTNLLTLHQLTVTGLQLQDQA 237

Query: 207 TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS 266
                       +K     +    +  L  N+         +   SV        + +  
Sbjct: 238 QLTLFRSYID-QVKASALTIDIKRLDVLESNIEMPNYTLN-NINLSVQNWQWPATHWQQH 295

Query: 267 AKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLN---------- 316
                L+ +  I   N       + S         +  +    +     N          
Sbjct: 296 EALVSLNAS-SIQWLNTVFEEPIVNSTFSPQQITVNGLSTKVLEGYVQFNGALTPDVLAL 354

Query: 317 --FSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374
              + NG + +   N             +  + + D+ Y+        N        N +
Sbjct: 355 NQVTVNGIKWVLPNNWPTHLRTLNSLYSDISVTQLDVGYAQLTDTNPANPFQIAGL-NIN 413

Query: 375 GDKMIL 380
           G+ +IL
Sbjct: 414 GEDLIL 419


>gi|238797579|ref|ZP_04641076.1| hypothetical protein ymoll0001_5490 [Yersinia mollaretii ATCC
           43969]
 gi|238718576|gb|EEQ10395.1| hypothetical protein ymoll0001_5490 [Yersinia mollaretii ATCC
           43969]
          Length = 1259

 Score = 41.4 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 43/345 (12%), Positives = 111/345 (32%), Gaps = 47/345 (13%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL  +  DFR   + Q   I G+++ + G  ++ I             +    + 
Sbjct: 216 ALFAKPLLPELPDFRLPLDLQIKSISGQQLRLTGDTEVVINSLLLQASTQDQRIALDKLE 275

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVF-------DMYIDQP---HLNFYLSSKG 120
           I   + G        L+ +     +++  + +         + I       L   L+  G
Sbjct: 276 IKSPQGGLSAQGEATLADKWPLSLVVNSSLNIEPLKGEKVKLTIGGALREQLTVALNLSG 335

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +      T      + +  + ++  +++      +  Y + +L ++++ +  +    +
Sbjct: 336 PVSVQLDAETSLGQAGLPVA-LTLQSKQLRWP-LAGEPEYQIDNLRMRLNGQATDYALSI 393

Query: 181 SIDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDL 234
             D          +  +G GN +      ++       N  +S  +     +++  ++ L
Sbjct: 394 RSDLKGIDLPPAVLTLDGKGNVEQFNLT-RLRLAALQGNTDLSGVVDWSKAISWNSVLTL 452

Query: 235 FG---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD--- 280
            G      W E     +G     G             L L+ + K++R++    ++    
Sbjct: 453 SGINTAKQWPEWPAKLNGKIVTRGSVYGGSWQLQVPELTLDGNVKQNRVTARGSLTGNAA 512

Query: 281 GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
           G   I    L      ++ D          ++ LL+ + +  +  
Sbjct: 513 GQWHIPGINLALGR--NTLDVKG----DLTDQWLLDANVDAPQLD 551


>gi|227824645|ref|ZP_03989477.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226905144|gb|EEH91062.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 443

 Score = 41.4 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 110/390 (28%), Gaps = 53/390 (13%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL--- 59
           R+V   LG +F+V++ G F V   +                  ++  ++G I +  L   
Sbjct: 12  RKVKYTLGIVFAVIV-GLFAVAYALSLQA--AAIFNMIAA---RQHFLEGTITVGRLTAT 65

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMY---IDQPHLNFYL 116
           P   V F+D+     E G+    +       + L L+        +    ++   +    
Sbjct: 66  PLGHVHFEDLVWTLDESGTK-VTVPDGHFHVKPLDLIMRRPSTSTITNVELNGASIELSF 124

Query: 117 SSK----GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII-------DQESDQVYFLSDL 165
            +K    G      +K             + VK   + +I           ++V+   D+
Sbjct: 125 DNKMHIRGFHMVEPKKEKKGKGKKKPNFDVKVKNLDVDLILNHCRVTAYYKERVHTFKDV 184

Query: 166 NLQISARFLNI------ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
           N  I     +          L      G V  +G+ +     S + +       N   SL
Sbjct: 185 NAAIHYDSKDRIDIDFSTGELGGTLEGGGVDIQGSVDLKPAVSTYDLNLGIRELN-PSSL 243

Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
              L        +     +     +PI  G   +       L          + G+FK  
Sbjct: 244 GTGLNIHE---TVTASAAVTGKLPEPIIIGQLYMKNLNLPGLKFT------NVRGDFKYK 294

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEK 339
           DG   I    + + +   + D      +        +    G +           E+   
Sbjct: 295 DG--YIGAQNVTADVFGGTCDASGGFNIDTK---AYDVYVKGHDLH--------SEDAAG 341

Query: 340 KNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369
                 L + D+  S N       ++    
Sbjct: 342 VPFFRTLVQLDLTMSCNGDNRSTVTYGTFT 371


>gi|325982417|ref|YP_004294819.1| hypothetical protein NAL212_1791 [Nitrosomonas sp. AL212]
 gi|325531936|gb|ADZ26657.1| protein of unknown function DUF490 [Nitrosomonas sp. AL212]
          Length = 1278

 Score = 41.0 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 32/320 (10%), Positives = 85/320 (26%), Gaps = 37/320 (11%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR     G +  +++        F++               +    +V   +    + F 
Sbjct: 16  RRFRWLAGLVSLMLICILLAGYWFVNS-----------QSGLQWTFSVVHRLSSGAIHFA 64

Query: 63  SV--FFKDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
            V     D+RI+        FE + + + +      L   +I +  +  +   ++   S+
Sbjct: 65  GVQGTLHDLRIENIHFSGDEFELQGQNIRIVWNPGKLFYKQIAIDQLIAETLRIHHLASA 124

Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKG---------------GRIKIIDQESDQVYFLS 163
           +        +S    +  + +  + +                   + +  +     + L 
Sbjct: 125 EDTPRGTLPESLNLPLA-LSIHALTIDSMYLTTVENKNAEPIITNLALALESDGHTHQLK 183

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
            LN       +   +  +  S           +     S                +KIQ 
Sbjct: 184 SLNFYTPWGSVTASAEFNGSS---PFDLSAQIDLSGVDSWGDAQMVI--TGSLERMKIQA 238

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
             +    + DL   L      P+     ++                  LS +F  ++   
Sbjct: 239 SMVQSTSVGDLQLQLHPFADNPVAQLDANIEQLNPASFIAAAPQASLSLSAHFAQNNSGQ 298

Query: 284 RISRYKLQSILPNSSTDEDN 303
              + ++++    +  D   
Sbjct: 299 LEGKVRIKNHEA-APYDAGG 317


>gi|238651044|ref|YP_002916901.1| hypothetical protein RPR_06910 [Rickettsia peacockii str. Rustic]
 gi|238625142|gb|ACR47848.1| hypothetical protein RPR_06910 [Rickettsia peacockii str. Rustic]
          Length = 876

 Score = 41.0 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 56/382 (14%), Positives = 137/382 (35%), Gaps = 33/382 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M++++  G+   FS++L   F    F+++           T  +G      G IK+H  P
Sbjct: 1   MIKKIAAGVIICFSLLLFIMFGALSFVNYNS----VTNNFTSHLGIAKENIGKIKMHKFP 56

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +  + IR         +  +E + +      L+    ++  + I         S   
Sbjct: 57  LSYLVIETIR------EEGKLDLEQIKIHFALWSLIKFNPKINKIDILDAKFY---SHSN 107

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
           V N +  +  +       L+ I++    + II+++   +   ++  L+      +     
Sbjct: 108 VLNIYNHEELIKNFFKYKLQNINLNVTNLSIINKQDYSILNFNNCILKKENALSSNYIFK 167

Query: 181 SIDSIKGSVIA---------EGTGNFDNKRSAFKITA---NFPAKNKAISLKIQ-LFPLA 227
           +  +  G +           + + N DN    FK++    +    + +   +I+ L  + 
Sbjct: 168 TTSNYIGKISGSINKRDDIVDFSLNIDNNDYGFKLSQIYKDSKLTSGSGEYQIKNLASVM 227

Query: 228 YPIIIDLFGNLFWNEKQPIYSGVFSVAGDF--SKLLNLELSAKKSRLSGNFKISDGNVRI 285
           Y I+ DL        +    +  F+++ +    +L ++ +++      G   I+  +   
Sbjct: 228 YNILPDLNHFFNKFNQHEAVNVKFNISNNEDAIELKDIVIASSFIIGHGFVNIAKNDNIT 287

Query: 286 SRYKLQSILPNSSTDEDNKTKVSQDEE---NLLNFSENGAESMHDLNE--TDFFEEEEKK 340
           +  KL     + S+      +V+ +         F+    ++   +NE      EE +K 
Sbjct: 288 TNVKLDFPKIDLSSLISPNAEVTFNTSSSNIRFIFANKLLKADVAINEIILSNNEELKKI 347

Query: 341 NKNDDLKKDDIQYSVNKKEEKD 362
             + +L K  ++ +      K 
Sbjct: 348 VFSSNLSKGTLKINEFSGNIKS 369


>gi|157370839|ref|YP_001478828.1| hypothetical protein Spro_2599 [Serratia proteamaculans 568]
 gi|157322603|gb|ABV41700.1| conserved hypothetical protein [Serratia proteamaculans 568]
          Length = 870

 Score = 41.0 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 33/289 (11%), Positives = 80/289 (27%), Gaps = 27/289 (9%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV--GKKIAVKGGIKIHI 58
           M +R+ + +G + SV+++          W        R  +  +  G ++ ++G ++ H 
Sbjct: 1   MTKRLKVFIGIVVSVLILLVAL------WQTLPRWLPRVLSHWLPQGSQLVLQGKLQWH- 53

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
               ++     R          +      +  +       ++    +++D          
Sbjct: 54  --QGALQLDGARFL--AQDCLLASAGPTRLAYQQGRW---QLIGDKLHVD--TACLSKLP 104

Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
            G +N              +L+ I +K   +          +      LQI A       
Sbjct: 105 AGDTNSAPLALDQLQKQLPLLD-ITIKDLSVL--------PWQFYAGKLQIHATAEGQSL 155

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
                ++    + +                +    +    + I L   + P    L G L
Sbjct: 156 QYQGPNVSVDALLDQHQQLTLNSLTLTAPNSPQPLHLTGKISIPLDLDSMPTQGALQGEL 215

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISR 287
                +               +   E  A K   +  ++I+   V I +
Sbjct: 216 QTAYLEKPLLLDMRWQQQQGVMTLTEKGADKPLATLPWEINPQQVSIKQ 264


>gi|318607389|emb|CBY28887.1| uncharacterized protein YtfN [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 1281

 Score = 41.0 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 43/344 (12%), Positives = 106/344 (30%), Gaps = 47/344 (13%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71
            F  PL  D  DFR   + Q   I G+++ + G   + I             +    + I
Sbjct: 239 LFAKPLLPDLPDFRLPLDLQIKEISGQQLRLTGDTDVLITSLLLQASTQDNRITLDTLDI 298

Query: 72  DQKEDG----SFESKIEGLSMRAEFLPLLSGEI-RVFDMYID-----QPHLNFYLSSKGV 121
              + G       +  +   +       L+ E  +   + +      +  L   L+  G 
Sbjct: 299 KSPQGGLSARGEATLADTWPLSITVNSALNIEPLKGEKVKLTVGGGLREQLKVALNLSGP 358

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +      T      + +  + ++  +++      +  + L +L ++++ +  +    + 
Sbjct: 359 VSAQLDAETALAQAGLPMA-LTLQSKQLRWP-LSGEPQFQLDNLRMRLNGQATDYALSIR 416

Query: 182 IDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDLF 235
            D              G GN +      ++       N  ++  +     +++  ++ L 
Sbjct: 417 SDFKGTDLPPAIFTLNGKGNVEQFNLT-RLRLAALQGNTDLTGVVDWSKAISWNSVLTLS 475

Query: 236 G---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281
           G      W E      G     G             L L+ + K++R++    ++    G
Sbjct: 476 GINTAKQWPEWPAKLDGKIVTRGSIHGGSWQLQVPELTLDGNVKQNRVTARGSLTGNAAG 535

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
              I    L      +  D         ++  LL+ + +  +  
Sbjct: 536 QWHIPGINLALGR--NKLDVKG----DLNDNWLLDANVDAPQLD 573


>gi|317493599|ref|ZP_07952020.1| hypothetical protein HMPREF0864_02785 [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316918542|gb|EFV39880.1| hypothetical protein HMPREF0864_02785 [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 1309

 Score = 40.6 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 53/400 (13%), Positives = 103/400 (25%), Gaps = 39/400 (9%)

Query: 16  VLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFK 67
           VL   F  PL  D  + R   +     I G ++ V G   I +            ++   
Sbjct: 262 VLAELFAKPLLPDLPELRLPLDLTVKRISGDQLRVTGDSDIVVNTLLVRAVTKDSALRLH 321

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH----------LNFYLS 117
            + +   +          LS +      L+ ++ V  +  ++            L    +
Sbjct: 322 TLEVRSPQGNVSMHGQATLSDQWPMDFRLNADLNVDPVKGEKLKLGIKGNLRDVLTLDAN 381

Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
             G         T      + L       G    +   S+       + L  S +   + 
Sbjct: 382 LSGPLKATLAAETQLAKAGLPLALTLESPGVQWPLTGASEYQAKNIRVRLNGSGKAYALS 441

Query: 178 SPLSIDSIKGS---VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
               +   +     +  +G G            A         +L      +++   + L
Sbjct: 442 MRTDVSGNEIPAAKITLDGKGTDQQFNLNRLRVAALQGNTDLSALVDWSKAISWKSKLTL 501

Query: 235 FG---NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
            G      W E     +G     G      N +L     +L+GN K +  +VR +    Q
Sbjct: 502 DGINTAKQWPEWPAKLNGKIETQG-SLYGGNWQLRVPVLQLAGNVKQNQVDVRGNLTGNQ 560

Query: 292 SILPNSSTDEDN----KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNK----- 342
           +               K  ++ +  +             D N        +   K     
Sbjct: 561 AGQWKIPEMHIGLGRNKIDITGELSDKWALDAVIDAPRLDGNLPGLAGTAKGTLKLRGNL 620

Query: 343 -----NDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDK 377
                  DL    +Q+            D  + E   G+ 
Sbjct: 621 KAPQVLADLTASGLQWQTLTINRVKLDGDVRSAEQIEGNL 660


>gi|291619064|ref|YP_003521806.1| YtfN [Pantoea ananatis LMG 20103]
 gi|291154094|gb|ADD78678.1| YtfN [Pantoea ananatis LMG 20103]
          Length = 1255

 Score = 40.6 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 41/361 (11%), Positives = 112/361 (31%), Gaps = 52/361 (14%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           ++VLIG      ++  G   +                     G  + +KG      +P  
Sbjct: 5   KKVLIGFLIFLVLLFAGLAFLIGTTP----------------GLHLVLKGAS--RWVPGL 46

Query: 63  SVF-----FKDIRIDQKEDGSFESKI--EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           S+      ++++ +           +    + +  +   LL   + V D+ +    ++  
Sbjct: 47  SINKVDGGWRNLTLSGLRYEMPGVSVNAGNIHLAVDLNCLLHSSVCVNDLTLKD--ISVV 104

Query: 116 LSSKGVSNWFQRKSTM------DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
           + SK ++                  + + L  + +    +K+ D        +S ++   
Sbjct: 105 VDSKKMTPSTAPPEEESGKTNLSTPYPITLRHVGLHNINVKVDDTA------ISLVDFTT 158

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
             ++ +    L+   I+  +IA        K    +     P  ++    +      A P
Sbjct: 159 GLQWQDRALTLNPTHIQSLLIALPKAAQVAKEQVVQPKIQQPKPDEKPLGETLQAMFAKP 218

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
           ++ +L          P +     +         L ++          ++    +     +
Sbjct: 219 LLPEL----------PDFQLPLDIDVKDIVGEQLRITGDTDITVSRLQVKAKTLD-RHMQ 267

Query: 290 LQSILPNSST-DEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
           LQ++  +S+    +   + +  +   ++ + NG +   D  + +      K    D+LK 
Sbjct: 268 LQTLAVDSNLGKLNGVGQATLADNWPVDLTLNG-DVNVDPVKGEKLNLTVKGAMRDELKL 326

Query: 349 D 349
            
Sbjct: 327 A 327


>gi|187925488|ref|YP_001897130.1| hypothetical protein Bphyt_3516 [Burkholderia phytofirmans PsJN]
 gi|187716682|gb|ACD17906.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN]
          Length = 373

 Score = 40.6 bits (93), Expect = 0.38,   Method: Composition-based stats.
 Identities = 16/193 (8%), Positives = 54/193 (27%), Gaps = 30/193 (15%)

Query: 35  DFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--FESKIEGLSMRAEF 92
           + + +    +G  +     I++ +    SV   ++ +            + + +++  + 
Sbjct: 34  EVKERVIAALG-PLGSAENIEVGL---TSVRLTNVLLKAPPGWPAGDPLRADEITLTPDI 89

Query: 93  LPLLSGEIRVFDMYIDQPHLNFYLSSKG-------------VSNWFQRKSTMDMIHNVIL 139
             L++  + V  + +    +    +  G              S+         +     +
Sbjct: 90  RDLIARRMHVRSVVVRGFDIAVLRTKDGAIRLMPNLRETVNQSDAEASGPAASIPREKQI 149

Query: 140 EKIHVKGGRIKIIDQESDQ---VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196
           + I  + G     D           +S+ N  +          L + ++        TG+
Sbjct: 150 DHISFEQGNFHFYDMTVGPPAFKVTVSNANATVDN--------LRLPALTDPTNVNVTGS 201

Query: 197 FDNKRSAFKITAN 209
                    ++  
Sbjct: 202 IKGPTHTGTVSFG 214


>gi|325919829|ref|ZP_08181821.1| hypothetical protein XGA_0761 [Xanthomonas gardneri ATCC 19865]
 gi|325549695|gb|EGD20557.1| hypothetical protein XGA_0761 [Xanthomonas gardneri ATCC 19865]
          Length = 1262

 Score = 40.6 bits (93), Expect = 0.38,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 77/305 (25%), Gaps = 45/305 (14%)

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK--GVSNWFQRKSTMDMIHNVI 138
              E + +  +  PLL  ++++  + +    LN   S +   + +W +    +++   + 
Sbjct: 72  FTAERVYLEPDLRPLLGRKLQLDAVQVSNATLNLGKSEEPFTLPSWPESLPQINVPLAIQ 131

Query: 139 LEKIHVKGGRIK-----------------------------IIDQESDQVYFLSDLNLQI 169
            +KI V   RI                              I     D       +    
Sbjct: 132 ADKIAVDNLRITQLQQPMIVLHKVQGGLEVATGELRTRNLVIDTDMGDFRLHGDYIPNDD 191

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
               L   + L     +           D  +    I    PA  +A  +        + 
Sbjct: 192 YRADLTATAVLPAARGRTPASLGLVARGDLDKMEVAIAGRAPAPLQASLVFTGRDAPTWA 251

Query: 230 IIIDLFG----------NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
                            N  +       +     +G      +L+ S K+  LS   + S
Sbjct: 252 FKAVTDALDTSLLMPASNGQYAAPATPIALNLQASGKG-GAADLQGSVKQGELSATLQPS 310

Query: 280 DGNVRISRYKLQSILPNSS---TDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEE 336
             ++      ++ ++ ++    T           +     F+ N +             +
Sbjct: 311 HISLLDQVITVEPLVIDTFEGRTQLRGTADFRDTQNPSFRFAVNASGLRFTPTPDPATPD 370

Query: 337 EEKKN 341
                
Sbjct: 371 APAVP 375


>gi|88797898|ref|ZP_01113486.1| hypothetical protein MED297_12120 [Reinekea sp. MED297]
 gi|88779575|gb|EAR10762.1| hypothetical protein MED297_12120 [Reinekea sp. MED297]
          Length = 438

 Score = 40.6 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 87/314 (27%), Gaps = 37/314 (11%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV--GKKIAVKGGIKIHI 58
           + R + I +  L  + L+ A           +R D     +  +  G     +  +++  
Sbjct: 6   IRRSLFIIISVLIVLALIAAV--------NLWRFDASEWLSKTLPVGAPALQQSDVEVQA 57

Query: 59  LPFPSVFFKDIRIDQKE--DGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
           L        ++   + +          + LS+R   L +L G+ R+  + +D P L    
Sbjct: 58  LGT------ELTFVEPDIQWSEARFSADLLSLRFNLLSVLLGQPRLQWIGLDAPVLEMAT 111

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
           +   V               +    + +    +              DL L +    +  
Sbjct: 112 NQIDVQQLHWPIDVGFQELTLTNGLLLLSDSEVT-------------DLELSLLKNGVFG 158

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
              +   +   +   + T       +      +         L   L  L +     L G
Sbjct: 159 EYAVQASAALYTPDWQATL---GLSTLLGRDGDENLVLGKTQLDTNLVMLNWTGR--LAG 213

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPN 296
            L      P      S     S     +       L     +++G +   R+ L ++   
Sbjct: 214 KLKSVRITPDNDLQLSYLSWSSNWRTSKELMPYI-LDWAGGLTEGTLSDGRWTLDTLDSA 272

Query: 297 SSTDEDNKTKVSQD 310
            +  + N T  +  
Sbjct: 273 LAYRDSNDTAHTLA 286


>gi|15892397|ref|NP_360111.1| hypothetical protein RC0474 [Rickettsia conorii str. Malish 7]
 gi|15619548|gb|AAL03012.1| unknown [Rickettsia conorii str. Malish 7]
          Length = 891

 Score = 40.6 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 40/333 (12%), Positives = 110/333 (33%), Gaps = 41/333 (12%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M++++  G+   FS++L   F    F+++           T  +G      G IK++  P
Sbjct: 16  MIKKIAAGVIICFSLLLFIMFGALSFVNYNS----VTNNFTSHLGIAKENIGKIKMNKFP 71

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +  + IR         +  +E + +      L+    ++  + I         S   
Sbjct: 72  LSYLVIETIR------EEGKLDLEQIKIHFSLWSLIKFNPKINKIDILDAKFY---SHSN 122

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
           V N +  +  +       L+ I++    + II+++   +   ++  L+            
Sbjct: 123 VLNIYNHEELIKNFFKYKLQNINLNVTNLSIINKQDYSILNFNNCILK------------ 170

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID---LFGN 237
             +++  + I + T N+       KI+ +   ++  +   + +    Y   +        
Sbjct: 171 KENALSSNYIFKTTSNYIG-----KISGSINKRDDIVDFSLNIDNNDYGFKLSQIYKDSK 225

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSA----KKSRLSGNFKISDGNVRISRYKLQSI 293
           L     +     + SV  +    LN   +     +   +  N   ++  + +    +   
Sbjct: 226 LTSGSGEYQIKNLASVMYNILPDLNHLFNKFNQHEAVNVKFNISNNEDAIELKDIVI--- 282

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
             +S         +++++    N   +  +   
Sbjct: 283 -ASSFIIGHGFVNIAKNDNITTNVKLDFPKIDL 314


>gi|229586615|ref|YP_002845116.1| hypothetical protein RAF_ORF0441 [Rickettsia africae ESF-5]
 gi|228021665|gb|ACP53373.1| Unknown [Rickettsia africae ESF-5]
          Length = 876

 Score = 40.6 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 42/335 (12%), Positives = 109/335 (32%), Gaps = 45/335 (13%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M++++  G+   FS++L   F    F+++           T  +G      G IK++  P
Sbjct: 1   MIKKIAAGVIICFSLLLFIMFGALSFVNYNS----VTNNFTSHLGIAKENIGKIKMNKFP 56

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +  + IR         +  +E + +      L+    ++  + I         S   
Sbjct: 57  LSYLVIETIR------EEGKLDLEQIKIHFSLWSLIKFNPKINKIDILDAKFY---SHSN 107

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
           V N +  +  +       L+ I++    + II+++   +   ++  L+            
Sbjct: 108 VLNIYNHEELIKNFFKYKLQNINLNVTNLSIINKQDYSILNFNNCILK------------ 155

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
             +++  + I + T N+       KI+ +   ++  +   + +    Y   +        
Sbjct: 156 KENALSSNYIFKTTSNYIG-----KISGSINKRDDIVDFSLNIDNNDYGFKLS-----QI 205

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI--------SRYKLQS 292
            +   + SG           +   +    + L   F      V +           +L+ 
Sbjct: 206 YKDSKLTSGSGEYQIKNLASVMYNILPDLNHLFNKFN-QHEAVNVKFNISNNEDEIELKD 264

Query: 293 ILPNSSTDE-DNKTKVSQDEENLLNFSENGAESMH 326
           I+  SS         +++++    N   +  +   
Sbjct: 265 IVIASSFIIGHGFVNIAKNDNITTNVKLDFPKIDL 299


>gi|332529871|ref|ZP_08405823.1| AsmA family protein [Hylemonella gracilis ATCC 19624]
 gi|332040665|gb|EGI77039.1| AsmA family protein [Hylemonella gracilis ATCC 19624]
          Length = 703

 Score = 40.6 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 78/297 (26%), Gaps = 29/297 (9%)

Query: 18  VGAFTVPLFIDWTDFREDFERQATLIVGKK-------IAVKGGIKIHILPFPSVFFKDIR 70
            G   +    D          Q     G +       + V   + +   P  S+      
Sbjct: 43  AGLAWIAARFDPQTQARQLAEQIRGQTGYQLTAAVPKLTVAPRLGLAWGP-LSLQSAGEE 101

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
           +         +  +G+ +  + L LL GE++V    ID  HL            +     
Sbjct: 102 LSAGAPARSVATAQGMHLSLDLLDLLRGEVQVRRARIDGLHL------------WPAPDR 149

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
             ++  + L+   +    +      +      S       +  +      +      +V 
Sbjct: 150 HYVVPTLELKLAQLAATGLASAVGPNGLATPSSPSAPSSPSSPVTASLTRAATLPTQAVQ 209

Query: 191 AEGTGNFDNKRSA-----FKITAN-FPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
           A GT   D + +       ++ A    A  ++  LK+Q             G      + 
Sbjct: 210 ATGTAVADPRLAPPLTHALELHATVLDAAGQSRPLKLQGQVGLETPEASAHGAASRQPRA 269

Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
                  ++      L      A        F ++ G + +  Y+   +        
Sbjct: 270 FHVLLQGALDQTTFALEASRTDASAVL---RFDLNLGTLDLDHYQAHPLAQPLPLTV 323


>gi|225164263|ref|ZP_03726535.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
 gi|224801134|gb|EEG19458.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
          Length = 266

 Score = 40.6 bits (93), Expect = 0.42,   Method: Composition-based stats.
 Identities = 25/220 (11%), Positives = 65/220 (29%), Gaps = 32/220 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           L++++I    L   + +    V         ++        I G ++ +       + PF
Sbjct: 8   LKKLIIAFC-LLVALGIVGLVVLSMYLGPILKKGVNTIGPKITGTRVELA---SASVSPF 63

Query: 62  P-SVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL-- 116
                 K + +             +  + ++ + + LL   I V ++ I +PH  F    
Sbjct: 64  AGGATLKGLFVGNPSGWKSDKAFYLGEIKVKLKSMSLLGDAIDVEEISIKEPHFVFEKGL 123

Query: 117 ------------------SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
                                  S   +  S       +I+ K  +   ++ +       
Sbjct: 124 TSSNINDLLKQIDANMGGGKTAQSKPNEPASDKTSAQKIIVRKFQLSDAQVTLGLGAMAS 183

Query: 159 V-----YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193
                   ++D+ +       + ++ + +  +   V A G
Sbjct: 184 TIPMPAITMTDIGVAEGGVTADQLATVILKRVLADVTAAG 223


>gi|302035602|ref|YP_003795924.1| putative heme utilization protein [Candidatus Nitrospira defluvii]
 gi|300603666|emb|CBK39997.1| putative large exoprotein involved in heme utilization or adhesion
           [Candidatus Nitrospira defluvii]
          Length = 1149

 Score = 40.6 bits (93), Expect = 0.42,   Method: Composition-based stats.
 Identities = 32/285 (11%), Positives = 71/285 (24%), Gaps = 5/285 (1%)

Query: 66  FKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWF 125
              I + Q  +       +  +    F       I       D  H      S G +   
Sbjct: 630 ASGITLAQPLNDVATLAAQTAAGDLTFTNNNGFTIGTVTATADGFHPALTGVSAGGAITL 689

Query: 126 QRKSTMDMIHNVILEKIHVKG-GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
           Q    +   H +    + + G G   + D  ++   F ++    +     + +  L   +
Sbjct: 690 QGGGAVAQTHRIHGSSLRLLGSGPFTLTDHTNEVTAFSANTTDHVQYTDASDVI-LGGSN 748

Query: 185 IKGSVIAEGTGNF-DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEK 243
           I G       G                 A +  I+L       +   +         +  
Sbjct: 749 IPGHFDLTTNGAITQGGALTVTGRTTLAAGSGDITLTQAGNNFSRVDVTSANHVALRDSD 808

Query: 244 QPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDN 303
             +                    +  S + G   ++ G+  I+    ++    +S     
Sbjct: 809 ALVLGASTVNGTLNVTTNGALTQSGASTVRGAATLATGSYDITLI--EAGNDFTSISITG 866

Query: 304 KTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKK 348
              VS  + N L  + +      D +           +   +L  
Sbjct: 867 GNHVSLRDTNALRLATSTTSGNLDADAGSVTIGGALTSSGGNLTL 911


>gi|297566659|ref|YP_003685631.1| hypothetical protein Mesil_2256 [Meiothermus silvanus DSM 9946]
 gi|296851108|gb|ADH64123.1| protein of unknown function DUF490 [Meiothermus silvanus DSM 9946]
          Length = 2780

 Score = 40.6 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 73/262 (27%), Gaps = 18/262 (6%)

Query: 48  IAVKGGIKIHILPFPSVFF-KDIRIDQKE-DGSFESKIEGLSMRAEFLPLLSGEIRVFDM 105
           + V+G +   + P  +V    D+     E  G+  +    LS R E              
Sbjct: 617 VRVQGPLAFRLAPGLAVSLRSDLTYRNGEFSGTASAVTPYLSARLEGRGQGLWATTQGYA 676

Query: 106 YIDQPHLNFYLSSKGVSNWFQRKSTMDM--IHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            +  P         G        +        +V      +  GR+        +V   +
Sbjct: 677 ELSGPVFP-DTQLSGQLTLPSLGAVQISKLPMHVTRNGATLGEGRVDFKPGFPFRVLLPA 735

Query: 164 DLNLQISARFLNIISPLSIDSIKGSV-IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
            +    +    +        +++      +G+GN+ + +   ++ A  P     +S    
Sbjct: 736 RIGGIPATLRGSGGVEGGNLAVRLPWGEVQGSGNWHDLQVTGEL-AYAPLGQGRLSGTAN 794

Query: 223 LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL-ELSAKKSRLSGNFKISDG 281
           L            G+       P   G   V G  + L         +  +SG ++   G
Sbjct: 795 L----------FEGSYALRLAVPKLDGALRVFGKGASLTYAGSFQDGRLEVSGAYRAEAG 844

Query: 282 NVRISRYKLQSILPNSSTDEDN 303
              +    L+    +   +   
Sbjct: 845 RNALEGLALKVKARDFDLEPLG 866


>gi|50120039|ref|YP_049206.1| hypothetical protein ECA1100 [Pectobacterium atrosepticum SCRI1043]
 gi|49610565|emb|CAG74010.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 1256

 Score = 40.6 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 34/341 (9%), Positives = 96/341 (28%), Gaps = 30/341 (8%)

Query: 36  FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95
                  I G+ + V   + +HI   PS+       D   +G+  ++ + +S        
Sbjct: 564 ITASVQGISGETVTVDHTLDVHINTLPSITLTPPFTDGVLNGAEAAQDQVISGETGI--- 620

Query: 96  LSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE 155
            SG  +   + I   ++   + + G       K  +  + +  +  + +      + D  
Sbjct: 621 -SGRGQTVSLTIGGYYVAGTVDANGHWTVTIPKDVLQNLPSDNISVLEI-----VVRDIA 674

Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215
            ++     ++++  +   L + +    + + G          D       ++        
Sbjct: 675 GNETIVTQNISVDTTPPTLTVSAIAQDNILNG-----MELAVDQI-----VSGTASLSEA 724

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
             ++ + L    Y   +   GN              +       +   + +   + ++  
Sbjct: 725 GRTVTVTLNAKPYTATVGSDGNWSVTLPTADL-VAIADGNQNLTVTLTDAAGNTTTVTRP 783

Query: 276 FKISDGNVRISRYKLQSILPNS---------STDEDNKTKVSQDEENLLNFSENGAESMH 326
             I  G        + ++  ++         S         + +   ++  S NG   + 
Sbjct: 784 LTIDSGATTAPTITINNVADDNVIDGAEAKVSQQLSGT-TANVEAGQVVTISLNGKTYLA 842

Query: 327 DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
            +     +           L       SVN   +  N+   
Sbjct: 843 TVQSGGVWSINVSTADIALLADGPHSISVNVSNKSGNAASG 883


>gi|13471631|ref|NP_103197.1| hypothetical protein mll1661 [Mesorhizobium loti MAFF303099]
 gi|14022374|dbj|BAB48983.1| mll1661 [Mesorhizobium loti MAFF303099]
          Length = 2078

 Score = 40.6 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 27/227 (11%), Positives = 59/227 (25%), Gaps = 12/227 (5%)

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP 179
           G    F   +T D         I +  G +             SD+   I     ++   
Sbjct: 564 GERVKFSAAATRDPQGAFAANSISLTSGSLS---ASGTASAQGSDIQADIKGTLGDVSVL 620

Query: 180 LSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN--------KAISLKIQLFPLAYPII 231
             +  +  +       +    R+A   T +  + +        KAI L            
Sbjct: 621 SPMVGVPVAGGVNFALSASGARTAPDFTVSADSDSLTASGRTVKAIKLTASGKADIASPS 680

Query: 232 IDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
            D+      N++          +     +    +S   +++SG+  + D  + +    L 
Sbjct: 681 ADVSLTGSVNDQPLDLKAALVTSEGKRSINGFLVSLGDNKVSGDLALDDKFMPLGTLTLA 740

Query: 292 SILPNSSTDEDNKT-KVSQDEENLLNFSENGAESMHDLNETDFFEEE 337
           +   +       +      +   L     +      D   T     E
Sbjct: 741 APAIDQLAALAGQAVTGDINGTILFAKDGDAPSVTIDAKSTSIARGE 787


>gi|329297932|ref|ZP_08255268.1| hypothetical protein Pstas_17970 [Plautia stali symbiont]
          Length = 1256

 Score = 40.6 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 40/358 (11%), Positives = 103/358 (28%), Gaps = 56/358 (15%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           ++VLIG+G    V+L     +                     G  +  K       +P  
Sbjct: 5   KKVLIGIGIFMLVLLASVAFLVGTTP----------------GLHLLFKSAD--RWVPGL 46

Query: 63  SVF-----FKDIRIDQKEDGSFESKIE--GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
           S+      ++D+ +   +       ++     +      LL   + V D+ +    +   
Sbjct: 47  SINKVEGGWRDLTLSGVKYQMPGVSVDAGRFHLALNLNCLLHSSVCVNDIALQDVSVVVD 106

Query: 116 ------------LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
                           G SN            ++    + V    I ++D  S   +   
Sbjct: 107 SKKMTPASAPPPEEESGSSNLSTPYPITLSRVSLHNINVKVDDTAISLLDFTSGLQWQDR 166

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDN---------KRSAFKITANFPAKN 214
            L L  +     +I+      +    + +                 ++ F         +
Sbjct: 167 ALTLNPTHIQSLLIALPKAAKVADEQVVQPKVQLPQPDEKPLGETLQAMFAEPLLPALPD 226

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274
             + L I +  L     + + G+      + +     +      +  +++    +   SG
Sbjct: 227 FQLPLDINVQQL-LGEQLRITGDTDVAITRLLLKAKTTDRHVQLETFDIDSPQGQLNASG 285

Query: 275 NFKISD---------GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
           + +++D         G++ +   K + I  N +    ++ K+  +    +    + A 
Sbjct: 286 DARLADNWPVNVVLNGSLNLDPIKGEKIKLNLAGAMRDELKLGLNLSGPVRAQLDAAA 343



 Score = 37.9 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 47/338 (13%), Positives = 103/338 (30%), Gaps = 31/338 (9%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL     DF+   +     ++G+++ + G   + I             V  +   
Sbjct: 214 AMFAEPLLPALPDFQLPLDINVQQLLGEQLRITGDTDVAITRLLLKAKTTDRHVQLETFD 273

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF-----YLSSKGVSNWF 125
           ID  +     S    L+       +L+G + +  +  ++  LN           G++   
Sbjct: 274 IDSPQGQLNASGDARLADNWPVNVVLNGSLNLDPIKGEKIKLNLAGAMRDELKLGLNLSG 333

Query: 126 QRKSTMDMIHNVILEK----IHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             ++ +D      +      + +   +++         Y   +L+ Q S +  + +  L 
Sbjct: 334 PVRAQLDAAAQPAVAGLPLSLKLTSPQLRWP-LTGPVQYQADNLDYQFSGKATDYVMSLR 392

Query: 182 IDSI-----KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
                      ++  +G GN           A         +L      +++   + L G
Sbjct: 393 TAVKGEAVPPATITLDGKGNVQQFSLDKLRVAALQGNIDLSALVDWSKAISWRSELTLAG 452

Query: 237 ---NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS----DGNVRISRYK 289
                 + +      G  +  G      + +LS  +  L GN K +    +G +  + Y 
Sbjct: 453 INTAKQYPDWPAKLDGKITTRG-SLYGGSWQLSVPQLALKGNVKQNAVSAEGTLTGNSYN 511

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
              I         N   V  +  + LN   +      D
Sbjct: 512 QWKIPGIDIALGRNHLDVKGELSDALNLDASVDAPHLD 549


>gi|118474350|ref|YP_891874.1| hypothetical protein CFF8240_0699 [Campylobacter fetus subsp. fetus
           82-40]
 gi|118413576|gb|ABK81996.1| conserved hypothetical protein [Campylobacter fetus subsp. fetus
           82-40]
          Length = 849

 Score = 40.6 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 37/341 (10%), Positives = 91/341 (26%), Gaps = 27/341 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R +L  LG +  + +     +      +  +   E+ AT   G KI +K          
Sbjct: 1   MRVLLWILGIIAVLFISAYTILFTSFGNSLMKPYVEKIATQKSGMKIELK---------K 51

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL--NFYLSSK 119
             V      I    +      + G     +    L+   +   +      +  N  L+  
Sbjct: 52  FKVGLSKADIQAAINSELNLTVTGSYNLIKKNFDLNYTAQTRSLNSFGIDIKDNISLNGD 111

Query: 120 --GVSNWFQRKSTM---DMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL 174
             G  N F                +  +++K   +K+ D +S  +  +S + L       
Sbjct: 112 MIGNLNNFVVNGAGILVGSNMRFAIRVVNLKPLELKL-DAKSLNLAQISTIALHKPYIIG 170

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNK-------RSAFKITA-NFPAKNKAISLKIQLFPL 226
           ++ +   I         +   N           ++ F I+  +         +K+     
Sbjct: 171 HLDATADISYANNGYQGDANLNIKKANTNNELIQNDFNISLPSNFFITAKSDIKLSGDIA 230

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
               +I     +       +Y+   +       L   +L   +  +  + K        +
Sbjct: 231 TAKTVIKSPIAVAAALNS-VYNISNNKLNTDLNLNIPDLLKLEPLIKQSLKGEITLNANT 289

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
           +     +    +        +   +        +      D
Sbjct: 290 QIDANKLSFLDA-QIKGLGGIVIAKLKDNKIDADIKNIKLD 329


>gi|294013201|ref|YP_003546661.1| hypothetical protein SJA_C1-32150 [Sphingobium japonicum UT26S]
 gi|292676531|dbj|BAI98049.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
          Length = 1395

 Score = 40.3 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 33/301 (10%), Positives = 84/301 (27%), Gaps = 19/301 (6%)

Query: 26  FIDWTDFREDFERQATL---IVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESK 82
           F+D    ++   RQ        G  I V G I   I    ++   ++ +   +     + 
Sbjct: 39  FLDTQPGKKFLIRQIAALKLESGMAIEV-GRIDGSIYSDMTIR--NLVLRDPKGI--FAV 93

Query: 83  IEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKI 142
              + +       +   I V    ++ P +    S     N  +      ++ ++ ++  
Sbjct: 94  SPEVHVVWSPFRYIDNHISVR--LLESPLVVLARSP--RFNITKTDPNAPILPDLDIDVD 149

Query: 143 HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202
            +K  R  +      Q   ++ ++          I         G    +   +    ++
Sbjct: 150 RLKIARFLVAKPVIGQKREIA-IDGVTHIADGRAILSADAVVDSGD-RLQANLDAVPAQN 207

Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI-YSGVFSVAGDFSKLL 261
              +     A    +   +      +   +D  G       + I  SG   +A       
Sbjct: 208 RLAMKGRLTAPKGGVIAAMSGLTDGFTATLDGRGTWQAWNGRLIAMSGKGELANIALAAR 267

Query: 262 NLELSAKKSRLSG-NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320
           +   +AK     G  F  +   +      +      +    + K  +   +   +  +  
Sbjct: 268 DGNFTAKGPLRPGLVFAGTVDRLTTPALDVDLFAGMNERRVNLKGSL---KSPAVAATAQ 324

Query: 321 G 321
           G
Sbjct: 325 G 325


>gi|16126460|ref|NP_421024.1| hypothetical protein CC_2221 [Caulobacter crescentus CB15]
 gi|221235241|ref|YP_002517677.1| hypothetical protein CCNA_02304 [Caulobacter crescentus NA1000]
 gi|13423726|gb|AAK24192.1| hypothetical protein CC_2221 [Caulobacter crescentus CB15]
 gi|220964413|gb|ACL95769.1| conserved hypothetical protein [Caulobacter crescentus NA1000]
          Length = 341

 Score = 40.3 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 20/190 (10%), Positives = 55/190 (28%), Gaps = 20/190 (10%)

Query: 15  VVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKG-GIKIHI-----LPF-PSVFFK 67
            +L           W   R   E+Q        +  +G  +          PF  ++   
Sbjct: 25  FILAAILAGAWSYGWIWLRGQAEQQMDAQA-ADLRSRGYDLSWSARTFSGFPFRMNIQMS 83

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFD-MYIDQPHLNFYLSSKGVSNWFQ 126
           D+R+ +        ++  L   A    L    +   + + + +P     ++  G +    
Sbjct: 84  DVRVAEPTGW--ALRLPQLKGEAAVYNLTHWVLVAPNGVVLTRPESG-DVTIAGDALRAS 140

Query: 127 RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFL---SDLNLQISARFLNIISPLSID 183
                +        +I ++G ++  +   + + + L     + L +     +    +   
Sbjct: 141 ISHVTEYPP-----RISIEGAKLTFVPGANAKPFTLVSADRMQLHVRGGGPDDQGAVFFK 195

Query: 184 SIKGSVIAEG 193
           +        G
Sbjct: 196 ADGAKTAFPG 205


>gi|319955035|ref|YP_004166302.1| hypothetical protein Celal_3540 [Cellulophaga algicola DSM 14237]
 gi|319423695|gb|ADV50804.1| protein of unknown function DUF490 [Cellulophaga algicola DSM
           14237]
          Length = 1667

 Score = 40.3 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 42/392 (10%), Positives = 103/392 (26%), Gaps = 41/392 (10%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +L+R+L     L    +     +                A      KI +   + +    
Sbjct: 12  ILKRILRVFAVLLLFFICSILFIRSPWGQDIIVTKVVNYAAEKTNTKIGID-RLFVTF-- 68

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGE-IRVFDMYIDQPHLNFYLSSK 119
             ++F + + ++  +        + L       P++ G  I +  +       N     +
Sbjct: 69  SGNIFLEGLYLEDTKG-DTLIYSKTLEANLPLAPIIFGNGITLKSLEWQGVKANISR-KE 126

Query: 120 GVSNWFQ-------------RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLN 166
           GV  +               +        ++ +  I +    IK  D        +    
Sbjct: 127 GVEEFNFDFLIQAFATQDTVKTVQESKPLDLTIGSISLSEFDIKYNDGFLGLESDIRLGK 186

Query: 167 LQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
           L ++    ++    ++D    +     T     +   F +T              +    
Sbjct: 187 LYLALEEFDLE---NMDFDVDNFELNNTTITYKQTKEFPVTEETTDTQLPHVSIRKFKLE 243

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
                 +   +     K  I     S+     +    +++           +++  + + 
Sbjct: 244 HVTTRYNSIPD-QIVAKAEIGDFELSLEKLDLESNIFDVNY--------LSLNNSTIYLK 294

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNE----TDFFEEEEKKNK 342
           + +LQ    N+    +  T              N  E   + N     +   +       
Sbjct: 295 QEELQLSSENTDQLVNKTTNFEW---PEYMVRVN--EIDFEKNNITYISGKQKPLAGTFN 349

Query: 343 NDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374
              L   +++   N     DN   K + E FS
Sbjct: 350 PAALAISNLRLKAN-DLFYDNGKTKLSLEAFS 380


>gi|224051806|ref|XP_002200365.1| PREDICTED: AHNAK nucleoprotein 2 [Taeniopygia guttata]
          Length = 7739

 Score = 40.3 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 36/322 (11%), Positives = 83/322 (25%), Gaps = 34/322 (10%)

Query: 60   PFPSVFFKD-IRIDQKEDGS------FESKIEGLSMRAEFLPLLSGEIRVF-DMYIDQPH 111
            P  ++  +  +++ +KE G          K    S          G +    ++ + +P 
Sbjct: 5197 PAATLSLEGEVKVPEKEAGKAKEGKFKMPKFGMPSFGWSSSRDTKGTVAGEMEISLQEPQ 5256

Query: 112  LNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV----KGGRIKIIDQESDQVYFLSDLNL 167
            +     +  V               V +E   V    + GR K+ D +   +        
Sbjct: 5257 VTVPSGATEVEVSLPTADIQAPSVEVTVESATVAAEGEKGRFKMPDVKMPSIKL------ 5310

Query: 168  QISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLA 227
                +       L    +      EG       ++             + S+KI +  + 
Sbjct: 5311 -PKFKAPQAQVSLPQAEVSLPKGQEGEVTLQGPKAEASPEVAAGKAEGS-SMKIHMPKVK 5368

Query: 228  YPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
             P ++     +   +     S     V    + +           + G+  I   ++ +S
Sbjct: 5369 VPSVVFAKPTVKSPKLDTEVSLPQAEVKAADTDITITAPDITLPSVEGSLDIQRSDIDLS 5428

Query: 287  RYKLQSILPNSSTDEDNKTKVSQDEENLLN------------FSENGAESMHDLNE-TDF 333
                +  L    +    K K+ + ++                 S   A+        T  
Sbjct: 5429 APSGEGKLELEGSGLKGKLKMPKFDKPKFTASSPKAEGPTAEVSLPSAQVDLPSTTMTAS 5488

Query: 334  FEEEEKKNKNDDLKKDDIQYSV 355
             +      +   LK        
Sbjct: 5489 ADGSGFNLEKSSLKMPKADIKA 5510



 Score = 39.1 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 72/270 (26%), Gaps = 21/270 (7%)

Query: 104  DMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHV----KGGRIKIIDQESDQV 159
            D+ I +P +     +  V               V +E   V    + GR K+ D +    
Sbjct: 3559 DVSIQEPQVTVPSGATEVEVTLPTSDIQAPSVEVTVETATVAAEGEKGRFKMPDVK-MPD 3617

Query: 160  YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
              +  + L    +       L    +      EG       ++             + S+
Sbjct: 3618 VKMPSVKL-PKVKAPQAQISLPQAEVSLPKEQEGEVTLQGPKAEASPEVAAGKAEGS-SM 3675

Query: 220  KIQLFPLAYPIIIDLFGNLFWNEKQPIYSG-VFSVAGDFSKLLNLELSAKKSRLSGNFKI 278
            KI +  +  P ++     +   +     S     +    + +           + G+  I
Sbjct: 3676 KIHMPKVKVPSVVFAKPTIKSPKLDTDVSLPQAEIKAADTDITITAPDITLPSVEGSLDI 3735

Query: 279  SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFS----------ENGAESMHDL 328
               ++ ++    +  L    +    K K+ + ++     S           +   +  DL
Sbjct: 3736 QTSDIDLNAPSGEGKLELEGSGLKGKLKMPKFDKPKFTASSPKTEGPTAEVSLPSAEVDL 3795

Query: 329  NETDFF---EEEEKKNKNDDLKKDDIQYSV 355
              T      +      +   LK        
Sbjct: 3796 PSTTVTASADGSGFNLEKPYLKMPKPDIKA 3825



 Score = 37.2 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 75/303 (24%), Gaps = 27/303 (8%)

Query: 72   DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVF-DMYIDQPHLNFYLSSKGVSNWFQRKST 130
              KE      K    S          G +    D+ + +P +     +  V         
Sbjct: 1609 KAKEGKFKMPKFGMPSFGWSSSRDTKGTVAAEVDISLQEPQVTMPSGATEVEVSLPTADI 1668

Query: 131  MDMIHNVILEKIHV----KGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186
                  V +E   V    + GR KI D +   V            +       L    + 
Sbjct: 1669 QAPSVEVTVETATVAAEGEKGRFKIPDVKMPSVKL-------PKVKAPQAQVSLPKAEVS 1721

Query: 187  GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
                 EG     +  +   +           S+KI +  +  P ++     +   +    
Sbjct: 1722 LPKGQEGEVALQSPEAEASLEVAAGKAEGG-SMKIHMPKVKVPSVVFSKPTVKSPKMAAD 1780

Query: 247  YSG-VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT 305
             S     +    + +           + G+  I   ++ +     +  L    +    K 
Sbjct: 1781 VSLPQAELKAADTDITITAPDITLPSVEGSLDIQTSDIDLKEPSGEGKLKLEGSGLKGKL 1840

Query: 306  KVSQDEENLLNFS----------ENGAESMHDLNETDFF---EEEEKKNKNDDLKKDDIQ 352
            K+ + ++     S           +   +  DL  T      +      +   LK     
Sbjct: 1841 KMPKLDKPKFTASSPKAECPTAEVSLPSAEVDLPSTTVTATADGSGLNLEKPSLKMPKAD 1900

Query: 353  YSV 355
               
Sbjct: 1901 IKA 1903



 Score = 36.4 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 25/302 (8%), Positives = 80/302 (26%), Gaps = 27/302 (8%)

Query: 79   FESKIEGLSMRAEFLPL--------LSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
             ++ I+   +      +        +  ++    + ++           G +   + K  
Sbjct: 5504 PKADIKAPKVDISLPSIDITLPQASIDVQVPEATLSLEG-EAKVPEKEAGKAKEGKFKMP 5562

Query: 131  MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
               + +          G +      S Q   ++  +           + +   S++ +V 
Sbjct: 5563 KFGMPSFGWSSSRDTKGTVAAGVDISLQEPQVTVPSGATEVEVSLPTADIQAPSVEVTVE 5622

Query: 191  AEGTGNFDNKRSAF---KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
               T   + ++       +           S+KI +  +  P ++     +   ++    
Sbjct: 5623 -TATVAAEGEKGRLKMPDVKMPDVKMPDGSSMKIHMPKVKVPSVVFSKPTVKSPKQDADV 5681

Query: 248  SG-VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
            S     +    + +           + G+  I   ++ +S    +  L    +    K K
Sbjct: 5682 SLPQAELKAADTDITITAPDITLPSVEGSLDIQTSDIDLSAPSGEGKLELEGSVLKGKLK 5741

Query: 307  VSQDEENLLNFS----------ENGAESMHDLNETDFF---EEEEKKNKNDDLKKDDIQY 353
            + + ++     S           +   +  DL  T      +      +   +K      
Sbjct: 5742 MPKFDKPKFTASSRKAEGPTAEVSLPSAEVDLPSTPVTASGDGSGLNLEKPSIKMPKADI 5801

Query: 354  SV 355
              
Sbjct: 5802 KA 5803


>gi|114798661|ref|YP_759363.1| hypothetical protein HNE_0634 [Hyphomonas neptunium ATCC 15444]
 gi|114738835|gb|ABI76960.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
          Length = 1109

 Score = 40.3 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 29/297 (9%), Positives = 78/297 (26%), Gaps = 22/297 (7%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR+++G   L    ++  + +         R+    QA         +    K   +   
Sbjct: 25  RRLILGFFLLLVFSVILVWLL---------RKPIAEQALDAWCADRDLTCDAKFTQIGAG 75

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
                 +RI    D    ++ + +S R  +        R+  + I    +   L   G+ 
Sbjct: 76  GATLTGVRISAGADVP--AEAQEVSARLSWPGFF--VPRIDGISITGLEMRGTLDPTGLK 131

Query: 123 NWFQRK-STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +   + +            I ++  RI +          L+   +       ++    +
Sbjct: 132 FYGLERLAAPTGGGGGTAPPIEIRDARIYLETPFGPAAATLNVSGVVPENATASLALDPA 191

Query: 182 IDSIK------GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
             ++       G                 ++ A+    N   +    L   A    +   
Sbjct: 192 RLALGEARMVLGEAFLTARIVDGAVTGELRLAADEAQANGHSASGFSLAAQA-AFPLSGE 250

Query: 236 GNLFWNEKQPIYSGVF-SVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQ 291
           G         +  G     +    +            +S +  +    + +++ +  
Sbjct: 251 GATSLEWSARLAEGTAPEASIAGLRTRGRAEFDALPDMSASSVLDALTLTVAQAEFD 307


>gi|227113347|ref|ZP_03827003.1| large repetitive protein [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 4874

 Score = 40.3 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 37/340 (10%), Positives = 93/340 (27%), Gaps = 28/340 (8%)

Query: 36  FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95
                  I G  + V   + +HI   PS+      +D   +G+  ++ + +         
Sbjct: 555 LTASVQGISGDTVTVDHTLDVHINTLPSITLTPPFVDGVLNGAEAAQDQVIRGETGI--- 611

Query: 96  LSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE 155
            SG  +   + I   ++   + + G       K  +  + +  +  + +      + D  
Sbjct: 612 -SGRGQTVSLTIGGNYVTGTVDANGNWTVTIPKDVLQSLPSDNISVLEI-----VVRDIA 665

Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215
            ++     D+ +  +   L + +    D + G          D       I         
Sbjct: 666 GNETIVTQDITVDTTPPTLTVSAIAQDDVLNG-----AELAVDQV-----INGTASFSEA 715

Query: 216 AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
             ++ + L    Y   +   GN              +       +   + +   + ++  
Sbjct: 716 GRTVTVTLNDKPYTTTVGNDGNWSITLPTADL-VAIADGNQNLTVTLTDAAGNTTTVTRP 774

Query: 276 FKISDGNVRISRYKLQSILPNSSTD-EDNKTKVSQDEE-------NLLNFSENGAESMHD 327
             I  G        + ++  ++  D  + K                ++  S NG   +  
Sbjct: 775 LTIDSGATTAPTITINNVADDNVIDGAEAKVSQQLSGTTTNVEAGQVVTISLNGKTYLAT 834

Query: 328 LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
           +     +           L       SVN   +  N+   
Sbjct: 835 VQSGGVWSINVSTADIALLADGAHSISVNVSNKAGNTASG 874


>gi|165933057|ref|YP_001649846.1| hypothetical protein RrIowa_0566 [Rickettsia rickettsii str. Iowa]
 gi|165908144|gb|ABY72440.1| hypothetical protein RrIowa_0566 [Rickettsia rickettsii str. Iowa]
          Length = 891

 Score = 40.3 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 40/333 (12%), Positives = 109/333 (32%), Gaps = 41/333 (12%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M++++  G+   FS++L        F+++           T  +G      G IK+H  P
Sbjct: 16  MIKKIAAGVIICFSLLLFIMCGALSFVNYNS----VTNNFTSHLGIAKENIGKIKMHKFP 71

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +  + IR         +  +E + +      L+    ++  + I         S   
Sbjct: 72  LSYLVIETIR------EEGKLDLEQIKIHFSLWSLIKFNPKINKIDILDAKFY---SHSN 122

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
           V N +  +  +       L+ I++    + II+++   +   ++  L+            
Sbjct: 123 VLNIYNHEELIKNFFKYKLQNINLNVTNLSIINKQDYSILNFNNCILK------------ 170

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID---LFGN 237
             +++  + I + T N+       KI+ +   ++  +   + +    Y   +        
Sbjct: 171 KENALSSNYIFKTTSNYIG-----KISGSINKRDDIVDFSLNIDNNDYGFKLSQIYKDSK 225

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSA----KKSRLSGNFKISDGNVRISRYKLQSI 293
           L     +     + SV  +    LN   +     +   +  N   ++  + +    +   
Sbjct: 226 LTSGSGEYQIKNLASVMYNILPDLNHLFNKFNQHEAVNVKFNISNNEDAIELKDIVI--- 282

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
             +S         +++++    N   +  +   
Sbjct: 283 -ASSFIIGHGFVNIAKNDNITTNVKLDFPKIDL 314


>gi|332970993|gb|EGK09966.1| hypothetical protein HMPREF0476_0823 [Kingella kingae ATCC 23330]
          Length = 1286

 Score = 40.3 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 40/381 (10%), Positives = 94/381 (24%), Gaps = 38/381 (9%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKI---AVKGGIKIHIL 59
           R +   LG +  ++   A  +   ++          Q   + G +I    + G I     
Sbjct: 24  RWLKYTLGGVVVLLGTSAGALTWLLNTESGLRFAVYQLPKLGGVQITSRTLNGSI----- 78

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-NFYLSS 118
                    I +          +I  L    +   L    + V  ++    H+ N     
Sbjct: 79  -LGGFSADKIAVQTPSAD---IQISQLQFAWQPNALWQRHLHVQKLHAGDIHIDNKATPP 134

Query: 119 KGVSNWFQRKSTMDMIHNVILEKIH---VKGGR-----IKIIDQESDQVYFLSDLNLQIS 170
           +           + +   + L+ +    +  G+     ++ I+      +    LN+   
Sbjct: 135 EPNRPKSAPLERIQLPFTLALDSLQTGAITQGKDKTEIVRGINASYVYNHEQHQLNVHSL 194

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
               +                 GT   D +     +            LK+        +
Sbjct: 195 RNHWSNTHGKLAMRTVAPFELGGTLLSDGELDGIVVENILDLSGSLHDLKVNTDLTGNGV 254

Query: 231 IIDLFGNLFW-NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYK 289
            +    +L    +          + G          S  +  L  +  I+          
Sbjct: 255 GLHGSTHLRLFADNFGSMINHVKITGQGINPQAFNPSLPRGNLFFDIGITP--------- 305

Query: 290 LQSILPNSSTDEDNKTKVSQD---EENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346
                 N +   D K  +  D     +         +    +N++   E  + +      
Sbjct: 306 ----NLNDNIALDGKLDLRNDTPEAADKNGLPIRTLQGEFHVNDSGAVEINQVQAALMQQ 361

Query: 347 KKDDIQYSVNKKEEKDNSHDK 367
               +   V  ++   N   K
Sbjct: 362 GTLSLSGGVYAQKRTLNLTAK 382


>gi|94501266|ref|ZP_01307787.1| hypothetical protein RED65_02599 [Oceanobacter sp. RED65]
 gi|94426537|gb|EAT11524.1| hypothetical protein RED65_02599 [Oceanobacter sp. RED65]
          Length = 714

 Score = 39.9 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 51/366 (13%), Positives = 130/366 (35%), Gaps = 30/366 (8%)

Query: 18  VGAFTVPLFIDWTDFREDFER-QATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQ--K 74
                 P+F       +  E   A      K+ ++           ++   ++ +     
Sbjct: 20  ASLQLAPMF-----AIQWLEDFYAQQGPNHKLQIQ-------NWSLNLIDGELALSNIHA 67

Query: 75  EDGSF-ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDM 133
           +  +  ++ I+ +S+   +LPL + ++ + ++ ++   +        +S    +      
Sbjct: 68  KWSTDQQATIDDISVDIRWLPLFNKQLVMNEIQLNGVRIPITEDDSNLSIAGIQIPLNGP 127

Query: 134 IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193
             +   +    K   I  ++  +     ++ +N+Q     LN+ + LS   +   +    
Sbjct: 128 KSSNTNQTSDNKDDNIDAVESGNPWAIEINSINIQQHTYQLNMKA-LSSKVMIEKLSLSN 186

Query: 194 TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253
             + +N+ ++  +         +      L      + I++ G+LF   K P +SG   +
Sbjct: 187 FHSLENRETSINLEGKIANLLMS-----NLAQADTELSINVQGSLFSLMKSPKFSGSVLI 241

Query: 254 AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313
                 L N        R+ G   I +  +  +   L  +     TD+  +  ++ D+  
Sbjct: 242 E--DLVLQNPIAQLASLRIDG-LNIEEQKLVSNDLILSGLALGEQTDK--QFWLTLDKYW 296

Query: 314 LLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK--EEKDNSHDKENQE 371
           L   +         ++     +    +++N +++   I  S N +  EE  NS +K+N  
Sbjct: 297 LNQLTLTSFGLTTGIHYVSGLKVNNYRDQNGEIEYS-IAGSGNTEKPEEHQNSIEKDNSA 355

Query: 372 NFSGDK 377
           N + D 
Sbjct: 356 NSADDA 361


>gi|270265030|ref|ZP_06193293.1| putative signal peptide protein [Serratia odorifera 4Rx13]
 gi|270040964|gb|EFA14065.1| putative signal peptide protein [Serratia odorifera 4Rx13]
          Length = 1272

 Score = 39.9 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 44/345 (12%), Positives = 102/345 (29%), Gaps = 46/345 (13%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71
            F  PL  D  D R   +     I G+++ + G  ++ I             +   +  +
Sbjct: 229 LFAKPLLPDLPDIRLPLDITVKEISGEQLRLTGDTEVLITSLLLQASTKDQHIQLDNFDV 288

Query: 72  DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF----------YLSSKGV 121
              +          L+       + +G + +  +  ++  LN            L+  G 
Sbjct: 289 KSPQGTLSAQGQATLTGNWPVEMVANGTLNIEPLKGEKVKLNLGGGLREELKVALNLSGP 348

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                   T      + L  + ++  ++K      +  Y ++D  L+ + +  +      
Sbjct: 349 VGAQLDVQTQLAEAGLPLA-LTLQSKQLKWP-LSGEAQYQINDFRLRFNGKATDYALSTR 406

Query: 182 IDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
            +          +  +G GN +  +      A         +L      +++   + L G
Sbjct: 407 ANIKGQDLPPAVLTLDGKGNVEQFKLDRLRLAALQGNADLSALVDWSKAISWNSQLMLSG 466

Query: 237 ---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---GN 282
                 W E      G  +  G            +L L+ + K+++++    +S    G 
Sbjct: 467 INTAKQWPEWPAKLDGKITTRGSLHGGNWQLQVPVLQLDGNVKQNKVTARGSLSGNAAGQ 526

Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
            +I    L      +  +   +      +E   N   N      D
Sbjct: 527 WKIPGIDLTLGR--NQLNVKGQL-----DEKSWNLDANIDAPRLD 564


>gi|148259602|ref|YP_001233729.1| hypothetical protein Acry_0586 [Acidiphilium cryptum JF-5]
 gi|146401283|gb|ABQ29810.1| hypothetical protein Acry_0586 [Acidiphilium cryptum JF-5]
          Length = 391

 Score = 39.9 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 28/256 (10%), Positives = 77/256 (30%), Gaps = 21/256 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV---GKKIAVKGGIKIHI 58
           +RR++  L  +  +  +G   +  +            QA   +   G  ++  G +    
Sbjct: 1   MRRLVRFLSLVVVLAALGWLGLWWY--AESRLALAVDQAAARLHAAGWTVS-HGAVTRGT 57

Query: 59  LPFPS-VFFKDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVF---DMYID-QPH 111
            PF + V   D+R+     +  +   +I  + +       L+ ++       M ++  P 
Sbjct: 58  SPFVADVRVADLRLTPPVADGPAPTLEIPAVDLVVHPAAPLTLDLGFATVWRMALEGGPS 117

Query: 112 LNFY---LSSKGVSNWFQRKSTMDMI-----HNVILEKIHVKGGRIKIIDQESDQVYFLS 163
                  +++    +                 +    ++  +     ++   +       
Sbjct: 118 FTLRFGSIAADDRFDLADLLHHAPDPLRAGAFHATDLRVDSENTNFTLVSIAAIDASGTR 177

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
           + +    +    +   L   ++    +  G   F  K +A  +         A+  ++ L
Sbjct: 178 NPDAGPDSMAATLHESLRGLALSPLFVTLGNLPFGGKLTALSVDLALFGPAAALPARLTL 237

Query: 224 FPLAYPIIIDLFGNLF 239
            P A  +      NL 
Sbjct: 238 PPGARWLAPGAAANLP 253


>gi|91213894|ref|YP_543880.1| ShlA/HecA/FhaA exofamily protein [Escherichia coli UTI89]
 gi|91075468|gb|ABE10349.1| putative member of ShlA/HecA/FhaA exoprotein family [Escherichia
           coli UTI89]
 gi|307629411|gb|ADN73715.1| hemagglutinin-related protein [Escherichia coli UM146]
          Length = 3262

 Score = 39.9 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 52/183 (28%), Gaps = 13/183 (7%)

Query: 137 VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196
           + L    +        D  + +   L    L   A  L +          G  +  G  +
Sbjct: 688 LTLNTASLSNPGKITADTLNVRATTLDGDGLLQGAGALALAGDTLSQGRNGRWLTAGDLS 747

Query: 197 FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN-------EKQPIYSG 249
              K      T N     +  +L +Q    A    +   GNL  +           +  G
Sbjct: 748 LRGK------TLNTAGTTQGQNLTVQADNWANSGSVLATGNLTASATGQLTSTGDIMSQG 801

Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
             ++    +      LSA    L+GN   + G V+ +   ++     +S        ++ 
Sbjct: 802 DTTLKAATTDNRGSLLSAGTLSLNGNSLDNSGTVQGNHITIRQNSVTNSGTLTGIAALTL 861

Query: 310 DEE 312
              
Sbjct: 862 AAR 864


>gi|257126522|ref|YP_003164636.1| hypothetical protein Lebu_1778 [Leptotrichia buccalis C-1013-b]
 gi|257050461|gb|ACV39645.1| protein of unknown function DUF490 [Leptotrichia buccalis C-1013-b]
          Length = 1526

 Score = 39.9 bits (91), Expect = 0.65,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 53/179 (29%), Gaps = 10/179 (5%)

Query: 139 LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD 198
           L  + +K G++  +D + D    + ++N  I  +   I         +  V        +
Sbjct: 272 LGNLKIKNGKLSYVDFDGD----IENVNAVIDLKKEKITVKADTKLSEQPVSLALDYLPE 327

Query: 199 NKRSAFKITANFPAKNKAISLKIQLFPL---AYPIIIDLFGNLFWNEKQPIYSGVFSVAG 255
             +   K+ AN     +    K+           I  +L  N+    K+    G FS   
Sbjct: 328 KNKLNLKLNANNVPFEEIARYKVIKDTKFTATGGITGNLDVNVDIKGKKATLDGKFSSDN 387

Query: 256 DFSKLLNLELSAKKSRL-SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313
                 N +      ++      +++     +     S    +   +  K       +N
Sbjct: 388 ITISNYNFQNVKTAMKIADNKVTLNNTTFVFNEE--ISGFRINQDVKIGKFVYDLKNKN 444


>gi|157828348|ref|YP_001494590.1| hypothetical protein A1G_02685 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|157800829|gb|ABV76082.1| hypothetical protein A1G_02685 [Rickettsia rickettsii str. 'Sheila
           Smith']
          Length = 876

 Score = 39.9 bits (91), Expect = 0.65,   Method: Composition-based stats.
 Identities = 40/333 (12%), Positives = 109/333 (32%), Gaps = 41/333 (12%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M++++  G+   FS++L        F+++           T  +G      G IK+H  P
Sbjct: 1   MIKKIAAGVIICFSLLLFIMCGALSFVNYNS----VTNNFTSHLGIAKENIGKIKMHKFP 56

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
              +  + IR         +  +E + +      L+    ++  + I         S   
Sbjct: 57  LSYLVIETIR------EEGKLDLEQIKIHFSLWSLIKFNPKINKIDILDAKFY---SHSN 107

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
           V N +  +  +       L+ I++    + II+++   +   ++  L+            
Sbjct: 108 VLNIYNHEELIKNFFKYKLQNINLNVTNLSIINKQDYSILNFNNCILK------------ 155

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID---LFGN 237
             +++  + I + T N+       KI+ +   ++  +   + +    Y   +        
Sbjct: 156 KENALSSNYIFKTTSNYIG-----KISGSINKRDDIVDFSLNIDNNDYGFKLSQIYKDSK 210

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSA----KKSRLSGNFKISDGNVRISRYKLQSI 293
           L     +     + SV  +    LN   +     +   +  N   ++  + +    +   
Sbjct: 211 LTSGSGEYQIKNLASVMYNILPDLNHLFNKFNQHEAVNVKFNISNNEDAIELKDIVI--- 267

Query: 294 LPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
             +S         +++++    N   +  +   
Sbjct: 268 -ASSFIIGHGFVNIAKNDNITTNVKLDFPKIDL 299


>gi|170739247|ref|YP_001767902.1| hypothetical protein M446_0919 [Methylobacterium sp. 4-46]
 gi|168193521|gb|ACA15468.1| hypothetical protein M446_0919 [Methylobacterium sp. 4-46]
          Length = 611

 Score = 39.9 bits (91), Expect = 0.67,   Method: Composition-based stats.
 Identities = 43/324 (13%), Positives = 98/324 (30%), Gaps = 43/324 (13%)

Query: 36  FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDI--RIDQKEDGSFESKIEGLSMRAEFL 93
            + +     G+   V+GG  + + P  +V  +D+  R D    G+    I  L +    L
Sbjct: 33  AQERLAAETGRTWTVRGGASLSLWPRVAVVLRDVGTRTDYPGVGTASLDIASLRVTGAPL 92

Query: 94  PLLSGEIRVFDMYIDQPHLNFY-------------------------LSSKGVSNWFQRK 128
            LL+G   +  + +++P L +                                       
Sbjct: 93  DLLAGR-DLAAIEVERPVLRWPAEWWRAGAPAGAAAAAGAAPDPDPAPDPAREQAGPAGH 151

Query: 129 STMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188
           +          E++ V GG + ++  ++  V  + DL+ +  AR           +  G+
Sbjct: 152 AGHAGSAGPRPERVRVTGGALLLVKGDT-VVASVEDLSAEALARAGGYEVKAGGRTGGGA 210

Query: 189 VIAEGTGNF--DNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
              + +     + + +    +   P    A  L+ +     +   + L   L        
Sbjct: 211 ARCDVSVAPPEEGESAPLTFSCRVPGL-GAEPLEGRADAALHGAALTL-ARLSAQVGAVP 268

Query: 247 YSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTK 306
           ++G   V       + ++L+     L     + D ++  +  +            D + +
Sbjct: 269 FTGAVVVDLTAKPFVRIDLAGGSLDLPAAGGLGDASLDPALLR----------SFDGRAR 318

Query: 307 VSQDEENLLNFSENGAESMHDLNE 330
           +          S   A     L E
Sbjct: 319 IRLGALRAGGLSLTEALLDGKLTE 342


>gi|148262752|ref|YP_001229458.1| hypothetical protein Gura_0673 [Geobacter uraniireducens Rf4]
 gi|146396252|gb|ABQ24885.1| hypothetical protein Gura_0673 [Geobacter uraniireducens Rf4]
          Length = 280

 Score = 39.9 bits (91), Expect = 0.67,   Method: Composition-based stats.
 Identities = 32/257 (12%), Positives = 78/257 (30%), Gaps = 19/257 (7%)

Query: 1   MLRRVLIGLG-FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHIL 59
           M RR LI +G  + + +         FI   + +    R      G  +         + 
Sbjct: 1   MNRRRLILMGWGIPAALFCLIILTIAFIPGKELQGVLARALENQ-GYTMR---TTSFGLA 56

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRV---FDMYIDQPHLNFYL 116
               +  +++ +  ++      K +  + +   LPL +G++ +     +   +    F  
Sbjct: 57  FPLGIRAQNLELGSEQG--PLLKFDRATAKIRILPLFAGKVVIGFQGTIGKGEVKGEFAP 114

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIID--------QESDQVYFLSDLNLQ 168
              G S        ++ I            G +++             D    +++ +LQ
Sbjct: 115 LKNGSSTLEIAGVQLEDIPFFKTVTGAQVKGELRVKGNFKGKQNAATGDLQLAVTEAHLQ 174

Query: 169 ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY 228
                   +   S  +I+G +   G G    +    +    +        L   +     
Sbjct: 175 GVKIGQMPLPDASYKTIQGMLRIGG-GKATLESLNLEGEGIYARLKGDTPLTTPMSAAPL 233

Query: 229 PIIIDLFGNLFWNEKQP 245
            + ++L     + +KQ 
Sbjct: 234 NLTLELMPKAEFLDKQK 250


>gi|223937387|ref|ZP_03629292.1| conserved hypothetical protein [bacterium Ellin514]
 gi|223893938|gb|EEF60394.1| conserved hypothetical protein [bacterium Ellin514]
          Length = 258

 Score = 39.9 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 72/260 (27%), Gaps = 34/260 (13%)

Query: 2   LRRVLI----GLGFLFSVVLVGAFTVPLFIDWTDF-REDFERQATLIVGKKIAVKGGIKI 56
           +++ LI    GLG L  V LV       F       ++  E     I    + + G   I
Sbjct: 1   MKKTLIRIVLGLGILLVVALVAV-----FFSLNSIVKKGVETVGPQITKVDVKL-GSANI 54

Query: 57  HILPFPSVFFKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL-- 112
                       + +   E        ++  + +  +   +LS  I V  + I  P +  
Sbjct: 55  SPFGGSG-QLSKLFVGNPEGYKTASAIQVGDVKVAVKVGSVLSDTIMVEQINIQAPEITM 113

Query: 113 --------------NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI----IDQ 154
                         N   +S+         +        I++ I V G ++ +    + Q
Sbjct: 114 EGTLTGNNLSKILENLNSTSETKEKVKNEPTAGKKEKKFIVKDIVVNGAKVHLNITALGQ 173

Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214
                  + D++LQ        +S   +       I  G      K  A           
Sbjct: 174 TLGMTVPIPDIHLQNVGTGEGGVSAAELSRQILKPILAGAVEAGTKAIADGGKQLKDIGK 233

Query: 215 KAISLKIQLFPLAYPIIIDL 234
                 +     A   + DL
Sbjct: 234 NLGKGSVDDLNKAAKGVTDL 253


>gi|282857275|ref|ZP_06266514.1| hypothetical protein HMPREF7215_2454 [Pyramidobacter piscolens
           W5455]
 gi|282584880|gb|EFB90209.1| hypothetical protein HMPREF7215_2454 [Pyramidobacter piscolens
           W5455]
          Length = 801

 Score = 39.9 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 40/321 (12%), Positives = 95/321 (29%), Gaps = 20/321 (6%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++  IG+  L +  +V   T+   +      +             +++ G       P 
Sbjct: 1   MKKFFIGIAVLLAAAIVAVCTLD--VGTGWIAQKGAEYVANTYNLGVSIGGAKG---NPV 55

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
               F DI +    DG+   K   + +    L LL+G + +  + +           +  
Sbjct: 56  KGYTFNDIELT--RDGTSLIKAGKIFVDPALLKLLTGNVALDWVELGGIKSTIPHLLQLA 113

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
             +  RK T+     +   +++  GG +   + E+     L+ L ++ S +     S   
Sbjct: 114 EIFTGRKVTLPSAVPLNDLQLNSVGGTLDGNEAEAAFDIALNGLPMKGSFKVSMAPSLTI 173

Query: 182 IDSIKGSVIAEGTGNFDNKR-SAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
                 +     + +         K   +        +L  QL        +     +  
Sbjct: 174 SKGDIQTAGGTISVSGGVTPELNLKAAVSKVQVGDLSALVPQLNSFLVKGRVTADMTVTG 233

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300
               P  +G  S        +   +SA     +    + D  V +    + +I   +   
Sbjct: 234 ALDNPAAAGTVSFD--DGSAMGFPVSA-----NATVAMKDMKVNLKPLAVSAIGIPTK-- 284

Query: 301 EDNKTKVSQDEE-NLLNFSEN 320
              +       +   +  + N
Sbjct: 285 --GEVFADLGGKTPSIKVNMN 303


>gi|325917409|ref|ZP_08179621.1| hypothetical protein XVE_3617 [Xanthomonas vesicatoria ATCC 35937]
 gi|325536366|gb|EGD08150.1| hypothetical protein XVE_3617 [Xanthomonas vesicatoria ATCC 35937]
          Length = 859

 Score = 39.9 bits (91), Expect = 0.71,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 84/312 (26%), Gaps = 39/312 (12%)

Query: 46  KKIAVKGGIKIHILPFPSVFFKDIRIDQKE----------DGSFESKIEGLSMRAEF--- 92
           +++ ++G  ++ +  F  +    + +                S   +   L + A     
Sbjct: 284 RQLRIEGDGRLQLGLFKQLRGGPMELFPSRAVFDNARVHWGKSELLRNGQLRLEASIARH 343

Query: 93  -------LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVK 145
                  L LL     +  ++ D   L+   +++G      R         +   +  ++
Sbjct: 344 APAQARGLALLQLTDALVAVHGDTAALDVTRTAQGRHTVVARPGKGRADGELRWTRGALQ 403

Query: 146 GG-----RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNK 200
            G     R  + D        L +L  Q+       ++    +     +  +     + +
Sbjct: 404 AGSQLHWRAPLHDSTRTPAALLGELAAQLQVDDAMRLTVSMPEPADAGLTLDADLRVEGR 463

Query: 201 RSAF-KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSK 259
           +     I    P  +    L  QL  L++                P      ++ GD   
Sbjct: 464 QLPLHSIRDLLPRTSGHARLHWQLASLSW-----------IPALFPDVD-WLTLEGDGLV 511

Query: 260 LLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSE 319
             +L ++  +       ++      +      +I   +S D       +      L    
Sbjct: 512 DADLRIARGQLGAGSRLQVPHVRAHVGVM-GHAIDGQASADLRVDADANSQLLPALALQM 570

Query: 320 NGAESMHDLNET 331
                 H    T
Sbjct: 571 QQFSIAHGDAPT 582


>gi|260464271|ref|ZP_05812463.1| protein of unknown function DUF490 [Mesorhizobium opportunistum
           WSM2075]
 gi|259029895|gb|EEW31179.1| protein of unknown function DUF490 [Mesorhizobium opportunistum
           WSM2075]
          Length = 2018

 Score = 39.9 bits (91), Expect = 0.74,   Method: Composition-based stats.
 Identities = 19/224 (8%), Positives = 53/224 (23%), Gaps = 7/224 (3%)

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS-DLNLQISARFLNIIS 178
           G   +    +            I +  G +      S Q   +  D+  ++    +   +
Sbjct: 505 GRVKFSAAATRDPQGA-FAANSISLTSGSLSASGTASMQGTDIQADIKGKLGDVSVLSPT 563

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK----AISLKIQLFPLAYPIIIDL 234
                +         +G            ++    +      I L             D+
Sbjct: 564 VGIPVAGGVGFALSASGALTAPDFTVSADSDSLTASGRTVKTIKLTASGKADIANPSADI 623

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
                 N++          +     +    +S   +++SG+  + D  + +    L +  
Sbjct: 624 SLTGAVNDQPLDVKASLVTSEGKRSINGFLVSLGDNKVSGDLALDDKFMPLGTLTLAAPA 683

Query: 295 PNSSTDEDNKTKV-SQDEENLLNFSENGAESMHDLNETDFFEEE 337
            +       +      +       + +      D   T     E
Sbjct: 684 IDQLAALAGQAVTGDINGTIDFAKAGDVPSVAIDAKSTSIARGE 727


>gi|296328062|ref|ZP_06870596.1| conserved hypothetical protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154838|gb|EFG95621.1| conserved hypothetical protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 495

 Score = 39.9 bits (91), Expect = 0.77,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 8/109 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++  IG+  LF V++V              +E  ER+ +      + + G + +     
Sbjct: 1   MKK-FIGILLLFIVIVVTILYFARDF---LLKEYLERKMSKANNAPVTI-GSVDLDYFEG 55

Query: 62  PSVFFKDIRI-DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
             V  KDI+I            I+ L    +        I   D  ID 
Sbjct: 56  -YVTLKDIKIMSNLHKDEIFISIDELKSYYDI-DFRKKVITFDDTEIDG 102


>gi|194365060|ref|YP_002027670.1| peptidase S45 penicillin amidase [Stenotrophomonas maltophilia
           R551-3]
 gi|194347864|gb|ACF50987.1| peptidase S45 penicillin amidase [Stenotrophomonas maltophilia
           R551-3]
          Length = 775

 Score = 39.5 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 33/380 (8%), Positives = 95/380 (25%), Gaps = 41/380 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +RR    +  +   +++        +      +     A   + + + ++          
Sbjct: 1   MRRTWRWVLGVLIAIVLVTVLGLWLLLRGSLADLDGEHALPGLARPVTIERD-------- 52

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEF--LPLLSGEIRVFDMYIDQPHLNFYLSSK 119
                  + I           +  +  +  +  + L+          +  P     + + 
Sbjct: 53  ---ALGVVTITAGSQADAMRALGHVHAQERYFEMDLMRRSAAGELSALFGPKA---IDAD 106

Query: 120 GVSNWFQRKSTMDMIHNVIL-EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                 + ++  +      L + I      +            L+DL+++  A  L   S
Sbjct: 107 KRMRVHRLRARTEANMQAALGDNIEAVSAYV------GGVNEGLTDLSVRPWAYLLLRQS 160

Query: 179 PLSI---DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY--PIIID 233
           P      DS+   +         N ++   ++        A+   I      +  P+  +
Sbjct: 161 PQPWQASDSVLAGLAMYADLQDPNNQTELALSRIRAVVPPALYALIAHDGTEWDAPLFGE 220

Query: 234 LFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSI 293
             GN    +   +            +     + +    ++G        +      L   
Sbjct: 221 ATGNAALPDASQLDLRTLKGKQGTEQEEADVIGSNNFAVAGALTADGRAIVADDMHLGLR 280

Query: 294 LP----------NSSTDEDNKTKV---SQDEENLLNFSENGAESMHDLNETDFFEEEEKK 340
            P                  +  V   S      +    NG  +    N      +   +
Sbjct: 281 APGLWFRVRLRYPDPQAAGGQVDVTGFSLPGLPAVIVGSNGHVAWGFTNSYIDTADYRTE 340

Query: 341 NKNDDLKKDDIQYSVNKKEE 360
             N  +   + + +V  + +
Sbjct: 341 PANAAVTVHEERIAVAGQAD 360


>gi|253582390|ref|ZP_04859613.1| predicted protein [Fusobacterium varium ATCC 27725]
 gi|251835929|gb|EES64467.1| predicted protein [Fusobacterium varium ATCC 27725]
          Length = 1479

 Score = 39.5 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 38/387 (9%), Positives = 104/387 (26%), Gaps = 64/387 (16%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           ++++ GL  L  +                  +  E    + +G KI+      I    + 
Sbjct: 10  KKIITGLSLLLILAGGYWSVKYHL------SKTVEIILQIALGPKISSS---SIEFKRYG 60

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG-- 120
            +  KD+++    +         + +      L   ++R+ ++ I     N      G  
Sbjct: 61  LIEIKDLKLIN--NKKTIIDAPKVELLYSKESL--KKLRIEEIIIYDGIANITREKNGDI 116

Query: 121 -------------VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS---- 163
                         ++    +        V +++I          D         +    
Sbjct: 117 NIVAAFTGESKEGKNDTEAEEKEYKPGIGVPIDRITAINATTNYTDLSYTNPIQETAYGT 176

Query: 164 ----------DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA----N 209
                      +NL    +  N +   ++++ K              ++     A     
Sbjct: 177 NGFLTFSKEKGINLIFKGKNENQVYTFALNTNKEPYDINIKLENIAVKTELLQYAYDGDE 236

Query: 210 FPAKNKAISLKIQLFPLAYPIIID----------LFGNLFWNEKQPIYSGVFSVAGDFSK 259
              K   ++L + + P       D          L  ++  +E    + G   +     +
Sbjct: 237 VSYKGGVLNLDLSISPKGLFGNADFKDVTVRYKELDTDVKVSEGTVDFQGKTVIVKADYE 296

Query: 260 LLNLELSAKKSRLSGNFKIS--DGNVRISRYKLQSILPNSSTDEDN------KTKVSQDE 311
           + + +             I     NV   + +  S+  + +   +N      K  ++ + 
Sbjct: 297 VFDTKEKFLLVYADDELNIDFAAKNVTYPQIQKYSLAKDLNLPLENLIVNNVKFNLNLNP 356

Query: 312 ENLLNFSENGAESMHDLNETDFFEEEE 338
           +     + +      +LN  +    + 
Sbjct: 357 QKEFKVTIDFLSKDFNLNNLELKNTKG 383


>gi|188989963|ref|YP_001901973.1| hypothetical protein xccb100_0568 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167731723|emb|CAP49903.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris]
          Length = 818

 Score = 39.5 bits (90), Expect = 0.85,   Method: Composition-based stats.
 Identities = 31/283 (10%), Positives = 75/283 (26%), Gaps = 34/283 (12%)

Query: 31  DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE----------DGSFE 80
            F      Q   +  +++ + G  ++    F  +    I +               G+  
Sbjct: 228 QFDRIVAEQVQALTLRQLQIAGDGQLQFGLFKQLRGGPIEVFPSRAVFEHATLHWAGTEL 287

Query: 81  SKIEGLSMRAEF----------LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
            +   L M A            L +L     +  +  D   L     ++G +    R   
Sbjct: 288 LRNGQLRMEASIARHTAAQARGLAVLQLTDALIGVRGDTAALEVTRDAQGKTRLKTRAGQ 347

Query: 131 MDMIHNVILEKIHVKGGR-IKII----DQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
                 +   +  ++ G  ++      D        L +L  Q+       +     +  
Sbjct: 348 GRADGELRWARGELQPGSHLQWRTPLHDGTRTPNALLGELAAQLQVDQDMRLRVSMPEPA 407

Query: 186 KGSVIAEGTGNFDNKRSAFKITAN-FPAKNKAISLKIQLFPLAYPI-------IIDLFGN 237
              +  +       +R   +   N  P  +    +  QL  L++          + L G+
Sbjct: 408 DAGLTLDADLRVQGRRLPLQAPRNLLPRTSGHARMHWQLASLSWIPALFPGVDWLTLEGD 467

Query: 238 LFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKIS 279
              +    I  G  +  +      +   +   +  + G     
Sbjct: 468 GLVDADLRIVRGQLAAGSRLQVPRVTARVGVMEHAIEGQASAD 510


>gi|22124574|ref|NP_667997.1| hypothetical protein y0661 [Yersinia pestis KIM 10]
 gi|45440414|ref|NP_991953.1| hypothetical protein YP_0560 [Yersinia pestis biovar Microtus str.
           91001]
 gi|108806071|ref|YP_649987.1| hypothetical protein YPA_0073 [Yersinia pestis Antiqua]
 gi|108813427|ref|YP_649194.1| hypothetical protein YPN_3267 [Yersinia pestis Nepal516]
 gi|153997300|ref|ZP_02022400.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|162418694|ref|YP_001608259.1| hypothetical protein YpAngola_A3963 [Yersinia pestis Angola]
 gi|165928170|ref|ZP_02224002.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165937411|ref|ZP_02225974.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166011314|ref|ZP_02232212.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166214004|ref|ZP_02240039.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401207|ref|ZP_02306707.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420577|ref|ZP_02312330.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167423646|ref|ZP_02315399.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|167469957|ref|ZP_02334661.1| hypothetical protein YpesF_19199 [Yersinia pestis FV-1]
 gi|218930537|ref|YP_002348412.1| hypothetical protein YPO3523 [Yersinia pestis CO92]
 gi|229839177|ref|ZP_04459336.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229896666|ref|ZP_04511833.1| conserved protein [Yersinia pestis Pestoides A]
 gi|229899741|ref|ZP_04514882.1| conserved protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229903903|ref|ZP_04519016.1| conserved protein [Yersinia pestis Nepal516]
 gi|270489108|ref|ZP_06206182.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294505349|ref|YP_003569411.1| hypothetical protein YPZ3_3240 [Yersinia pestis Z176003]
 gi|21957375|gb|AAM84248.1|AE013668_7 hypothetical protein y0661 [Yersinia pestis KIM 10]
 gi|45435271|gb|AAS60830.1| putative exported protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|108777075|gb|ABG19594.1| hypothetical protein YPN_3267 [Yersinia pestis Nepal516]
 gi|108777984|gb|ABG12042.1| hypothetical protein YPA_0073 [Yersinia pestis Antiqua]
 gi|115349148|emb|CAL22111.1| putative exported protein [Yersinia pestis CO92]
 gi|149288937|gb|EDM39017.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|162351509|gb|ABX85457.1| conserved hypothetical protein [Yersinia pestis Angola]
 gi|165914516|gb|EDR33130.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165919857|gb|EDR37158.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165989698|gb|EDR41999.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166204799|gb|EDR49279.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166961383|gb|EDR57404.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167049232|gb|EDR60640.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057816|gb|EDR67562.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|229679673|gb|EEO75776.1| conserved protein [Yersinia pestis Nepal516]
 gi|229687233|gb|EEO79308.1| conserved protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229695543|gb|EEO85590.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229700444|gb|EEO88476.1| conserved protein [Yersinia pestis Pestoides A]
 gi|262363414|gb|ACY60135.1| hypothetical protein YPD4_3231 [Yersinia pestis D106004]
 gi|262367211|gb|ACY63768.1| hypothetical protein YPD8_3096 [Yersinia pestis D182038]
 gi|270337612|gb|EFA48389.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294355808|gb|ADE66149.1| hypothetical protein YPZ3_3240 [Yersinia pestis Z176003]
          Length = 1305

 Score = 39.5 bits (90), Expect = 0.85,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 105/344 (30%), Gaps = 45/344 (13%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL     DFR   + Q   I G+++ + G  ++ I             +    + 
Sbjct: 262 ALFAKPLLPALPDFRLPLDLQIEEISGQQLRLTGDNEVLISSLLLQASTQDQRITLDTLE 321

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN----------FYLSSKG 120
           I   + G        L+ +     +++  + +  +  ++  L             L+  G
Sbjct: 322 IKSPQGGLSAQGQATLADKWPLDLVVNSALNIDSLKGEKVKLTVGGALREELKVTLNLSG 381

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +      T      + L  + ++  +++      +  Y +++L ++++ +  +    +
Sbjct: 382 PVSAQLETETSLAKAGLPL-SLTLQSKQLRWP-LTGEPQYQMNNLRMRLNGQATDYALSI 439

Query: 181 SIDSIKGS-----VIAEGTGN---FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             D             EG GN   F+  R               +  +  +   +   + 
Sbjct: 440 RSDIKGTDLPPAVFTLEGKGNVEQFNLTRLRLAALQGHTDLTGVVDWRQAISWNSVLTLS 499

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281
            +     W E      G     G             L L+ + K++R++    ++    G
Sbjct: 500 GINMAKQWPEWPAKLEGKIVTRGSIHGGSWQLQVPELVLDGNVKQNRVTARGSLTGNAAG 559

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
              I    L      +  D   +     ++  LL+ + +  +  
Sbjct: 560 QWHIPGINLALGR--NKLDMKGE----LNDNWLLDANVDAPQLD 597


>gi|292618776|ref|XP_684581.4| PREDICTED: neuroblast differentiation-associated protein AHNAK [Danio
            rerio]
          Length = 3307

 Score = 39.5 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 44/358 (12%), Positives = 99/358 (27%), Gaps = 64/358 (17%)

Query: 60   PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSG------EIRVFDMYIDQPHLN 113
            P   +  +   I   +    + KI+  ++  +   +  G      +  +  + +  P+L+
Sbjct: 744  PSSKLKLQKFGISGSKKKGPDLKIKSPNLNIKSPKMKGGIDTPDMDPTLPQVNLKAPNLD 803

Query: 114  FY------LSSKGVSNWFQRKSTMDMIHNVILE-----------------KIHVKGGRIK 150
                        G         +     ++ ++                    + G  I 
Sbjct: 804  LKSPDIDLKDPSGKFKMPSLGLSGLKEPHINVDAGIDQPDLNVSPLTPKLNAGINGPDID 863

Query: 151  IIDQESDQVYFLSDLNL----QISARFLNIISPLSIDSIKGSVIAEGTGNF-----DNKR 201
            I    +D     +DL L      S +       +    + G  +     +      D   
Sbjct: 864  IHGPHADFKGLKTDLKLPDMDMPSGKKKMPNFKMPSFGLTGPKLKTPDYDLKHPDMDLSP 923

Query: 202  SAFKITANFPAKNKAISL-----KIQLFPLAYPIII-------------DLFGNLFWNEK 243
              FK   + P  N   ++      + +      I               D   N    + 
Sbjct: 924  PKFKADVDSPDINLGHNIDVTAPNLNVDLPKGKIKGPDLKTPDLDMNAPDFDINAPSGKM 983

Query: 244  Q-PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSST--- 299
            + P +       G   K+ + +L+ K  ++ G     D ++ + +   +S   +  +   
Sbjct: 984  KLPKFGLSGKPKGPDFKINSPKLNLKSPKIKGGIDTPDMDMTLPQADFKSPNLDLKSPDI 1043

Query: 300  ---DEDNKTKVSQDEENLLNFS-ENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQY 353
                   K  +++ +   LN S   G     D+N  D          N  +   DI  
Sbjct: 1044 DLNGPSGKLNMAKPKMPSLNLSGLKGPHMNADVNHPDLNLTASTPKLNAGMSSPDIDI 1101


>gi|167031631|ref|YP_001666862.1| alpha-2-macroglobulin domain-containing protein [Pseudomonas putida
            GB-1]
 gi|166858119|gb|ABY96526.1| alpha-2-macroglobulin domain protein [Pseudomonas putida GB-1]
          Length = 1632

 Score = 39.5 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 84/312 (26%), Gaps = 32/312 (10%)

Query: 68   DIRIDQKEDGSFESKIEGLSMRA---EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNW 124
            D+++D       +  I  L +R    +        + V  + +D+      +S +     
Sbjct: 790  DVQLDNA-WARHDLYISALVIRPGERKANATPKRAVGVLHLPLDRAERKLAVSLQ----- 843

Query: 125  FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ-------ISARFLNII 177
               K        V ++  +   G +            +  LN+         ++ F    
Sbjct: 844  APEKMRPKQPLTVKVKAAN-ADGSVPKQVHVLLSAVDVGILNITDFKTPDPFASLFGRKA 902

Query: 178  SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
                   I G +I  G G   +             K    ++ I     + P+ +D  G 
Sbjct: 903  YGADQLDIYGQLIEAGQGRLASLAFGGDAAMAKGGKRPNTTVTIVAQ-QSLPVTLDDKGE 961

Query: 238  LFWNEKQPIYSGVFSV-------------AGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
                   P ++G   +              G       L       R       +   + 
Sbjct: 962  GQATVDIPDFNGELRLMAQAWTEEHFGMAEGKTVVAAPLIAELSAPRFLAGGDRTSLALD 1021

Query: 285  ISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFS-ENGAESMHDLNETDFFEEEEKKNKN 343
            ++    ++   N     D +  ++ +    +N +    +  M  +       + +   + 
Sbjct: 1022 LANLSGRAQQLNVEITIDGQLSLAANAVQSVNLTEGQRSTLMIPVQAQGGLGQGKVHVRV 1081

Query: 344  DDLKKDDIQYSV 355
              L+  +   + 
Sbjct: 1082 TGLQLPNEPATA 1093


>gi|21233019|ref|NP_638936.1| hypothetical protein XCC3590 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66766891|ref|YP_241653.1| hypothetical protein XC_0552 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21114866|gb|AAM42860.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572223|gb|AAY47633.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 815

 Score = 39.5 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 31/283 (10%), Positives = 75/283 (26%), Gaps = 34/283 (12%)

Query: 31  DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE----------DGSFE 80
            F      Q   +  +++ + G  ++    F  +    I +               G+  
Sbjct: 225 QFDRIVAEQVQALTLRQLQIAGDGQLQFGLFKQLRGGPIEVFPSRAVFEHATLHWAGTEL 284

Query: 81  SKIEGLSMRAEF----------LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
            +   L M A            L +L     +  +  D   L     ++G +    R   
Sbjct: 285 LRNGQLRMEASIARHTAAQARGLAVLQLTDALIGVRGDTAALEVTRDAQGKTRLKTRAGQ 344

Query: 131 MDMIHNVILEKIHVKGGR-IKII----DQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
                 +   +  ++ G  ++      D        L +L  Q+       +     +  
Sbjct: 345 GRADGELRWARGELQPGSHLQWRTPLHDGTRTPNALLGELAAQLQVDQDMRLRVSMPEPA 404

Query: 186 KGSVIAEGTGNFDNKRSAFKITAN-FPAKNKAISLKIQLFPLAYPI-------IIDLFGN 237
              +  +       +R   +   N  P  +    +  QL  L++          + L G+
Sbjct: 405 DAGLTLDADLRVQGRRLPLQAPRNLLPRTSGHARMHWQLASLSWIPALFPGVDWLTLEGD 464

Query: 238 LFWNEKQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKIS 279
              +    I  G  +  +      +   +   +  + G     
Sbjct: 465 GLVDADLRIVRGQLAAGSRLQVPRVTARVGVMEHAIEGQASAD 507


>gi|153004607|ref|YP_001378932.1| hypothetical protein Anae109_1745 [Anaeromyxobacter sp. Fw109-5]
 gi|152028180|gb|ABS25948.1| conserved hypothetical protein [Anaeromyxobacter sp. Fw109-5]
          Length = 384

 Score = 39.5 bits (90), Expect = 0.95,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 71/213 (33%), Gaps = 23/213 (10%)

Query: 70  RIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS-----KGVSNW 124
           ++  + +     ++E       F  LL G +    + ++ P L    +      +GV   
Sbjct: 69  KLGPEGEALPYFQVERARFGLYFKELLGGHVVAA-VDLEAPKLTLVSAKAPSREQGVEEA 127

Query: 125 FQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDS 184
            +    ++ +   +L+++ VK G +  +D+   +     +L L      L   +     +
Sbjct: 128 PEVGRGLEELTPFLLDRLQVKDGELLWVDESEPEK---PELWLHRLEGTLENFATRKALA 184

Query: 185 IKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
                +    G                 ++ A+S+     PLA  +     G L   +  
Sbjct: 185 KNEPTVLAARGVLQ--------------RSGAVSVFATADPLAKKLTFAGQGRLEGLKLA 230

Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK 277
            + + V S AG       L++S +     G   
Sbjct: 231 ELATLVGSKAGIAPDRGELDMSVRFRAEDGRIS 263


>gi|330994675|ref|ZP_08318598.1| hypothetical protein SXCC_04563 [Gluconacetobacter sp. SXCC-1]
 gi|329758316|gb|EGG74837.1| hypothetical protein SXCC_04563 [Gluconacetobacter sp. SXCC-1]
          Length = 1382

 Score = 39.1 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/254 (11%), Positives = 75/254 (29%), Gaps = 13/254 (5%)

Query: 7   IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFF 66
           + LG    +V V    V +  +    +   ER+   + G  + + G +     P  ++  
Sbjct: 3   LALGIPAGLVAVALGMVLVVANTGAGQRAIERRLPGLTGGSVHLSG-LGGR-FPD-ALRV 59

Query: 67  KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQ 126
             + +D          I+GL +    L LL     + ++ + +  +             +
Sbjct: 60  AHLELDDYRGA--WLSIDGLQLDWSPLRLLGRRAVIGNLSMTRLAIPRLSEEDPAHPAKK 117

Query: 127 RKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186
            +       ++ ++   V   RI++      +V  +  L    S   +  +      +  
Sbjct: 118 TQDQATGSIHMGIDIRAVHVARIEVG-AALARVPAVFRLEGHASLADIAPVLDHFSVATL 176

Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAY-------PIIIDLFGNLF 239
                       ++     +         A+ L+       +       P +  L  +L 
Sbjct: 177 PPANIALDLTRLDRPGTLALGTRLERGRVALDLRAHEGADGFVSTLSRMPALAPLDLSLS 236

Query: 240 WNEKQPIYSGVFSV 253
               +     V ++
Sbjct: 237 LAGPRDDTQLVLAL 250


>gi|209967164|ref|YP_002300079.1| hypothetical protein RC1_3925 [Rhodospirillum centenum SW]
 gi|209960630|gb|ACJ01267.1| conserved hypothetical protein [Rhodospirillum centenum SW]
          Length = 1488

 Score = 39.1 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 31/286 (10%), Positives = 79/286 (27%), Gaps = 13/286 (4%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR  L  +G L  +V++      +++     RE    Q        +     I+      
Sbjct: 5   LRWTLWIVGTLLGLVVLAVAGALVWLSTPGGRETVLAQVE-----PLVPGLEIEGAEGGL 59

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             +    + +  +E       +EG  +    L LL+G ++V  +   +  +     S   
Sbjct: 60  FDLGVARLTLADREG--VWLTVEGARLDWSPLDLLTGTVQVDALTAGRVAVARAPVSDPD 117

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                      +   V ++++ ++   +             +     + A  L     L 
Sbjct: 118 PEPETDAGPFSLPVAVDVDRLALERVELGAALLGGTPALLTAGGQGSLPAGRLGGSVDLR 177

Query: 182 IDSI---KGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
           ++ I    G+     T           +    PA    +  ++   P   P+ + + G  
Sbjct: 178 VERIDESPGTAALRAT-YVPGTSLDLDLRLAEPA--GGVLARLLEIPGRPPVDVAVTGEG 234

Query: 239 FWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVR 284
              +               +    +  +        +   +   + 
Sbjct: 235 PLTDWTGRLEASAGDVASATGEARIRPTGDAFAFGLDLSGNVAALA 280


>gi|157803911|ref|YP_001492460.1| hypothetical protein A1E_03720 [Rickettsia canadensis str. McKiel]
 gi|157785174|gb|ABV73675.1| hypothetical protein A1E_03720 [Rickettsia canadensis str. McKiel]
          Length = 876

 Score = 39.1 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 59/418 (14%), Positives = 131/418 (31%), Gaps = 57/418 (13%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M++++   +   FS++L   F+   F+++           T  +G        IK++  P
Sbjct: 1   MIKKITASIIICFSLLLFIIFSALSFVNYNS----VTNNLTSHLGIAKENIRKIKMNKFP 56

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPH-------LN 113
            P +  + IR         +  +E + +      L++   ++  + I           LN
Sbjct: 57  LPYLIIELIR------EEGKLDLEQIKIYFSLWSLITFNPKINKIDILDAKFYSNSNLLN 110

Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG--------------------------- 146
            Y   + + N+F+ K     ++   L  I+ +                            
Sbjct: 111 IYNHEELIKNFFKYKLQDINLNVTNLSIINKQDYSILNFNNCILKKENALSSFKTTSNYI 170

Query: 147 ----GRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202
               G I   D        + + +       +     L+  S +  +    +  +     
Sbjct: 171 GKISGSINKHDDTVAFSLNIDNNDYGFKLSQIYKDFKLTSGSGEYQLKNLASVIYSILP- 229

Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN 262
             K+  N   +N+A+++K  +      I +    ++         +G   +A +     N
Sbjct: 230 DLKLLFNKFNQNEAVNVKFNIANNEDEIELK---DIVIASSFITGNGFVHIAKNDHITTN 286

Query: 263 LELSAKKSRLSGNFKIS-DGNVRISRYKLQSILPNSSTDEDNKT-KVSQDEENLLN---F 317
           ++L   K  LS     +  G     R  ++ I  +     D K  ++       L    F
Sbjct: 287 VKLDFHKIDLSSLISPNAGGTFHTDRSNIRFIFADKLLKTDVKINEIILSNNEALEKIVF 346

Query: 318 SENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSG 375
           S N  +    +NE     +   + K       +   S+   +     +D  +  N  G
Sbjct: 347 SSNLLKGTLKINEFSGNIKSGGEFKLTGSVTQNAVRSMFDGQLYLQHNDINSLLNILG 404


>gi|145600819|ref|YP_001164895.1| hypothetical protein YPDSF_3572 [Yersinia pestis Pestoides F]
 gi|145212515|gb|ABP41922.1| hypothetical protein YPDSF_3572 [Yersinia pestis Pestoides F]
          Length = 1298

 Score = 39.1 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 105/344 (30%), Gaps = 45/344 (13%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL     DFR   + Q   I G+++ + G  ++ I             +    + 
Sbjct: 255 ALFAKPLLPALPDFRLPLDLQIEEISGQQLRLTGDNEVLISSLLLQASTQDQRITLDTLE 314

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN----------FYLSSKG 120
           I   + G        L+ +     +++  + +  +  ++  L             L+  G
Sbjct: 315 IKSPQGGLSAQGQATLADKWPLDLVVNSALNIDSLKGEKVKLTVGGALREELKVTLNLSG 374

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +      T      + L  + ++  +++      +  Y +++L ++++ +  +    +
Sbjct: 375 PVSAQLETETSLAKAGLPL-SLTLQSKQLRWP-LTGEPQYQMNNLRMRLNGQATDYALSI 432

Query: 181 SIDSIKGS-----VIAEGTGN---FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             D             EG GN   F+  R               +  +  +   +   + 
Sbjct: 433 RSDIKGTDLPPAVFTLEGKGNVEQFNLTRLRLAALQGHTDLTGVVDWRQAISWNSVLTLS 492

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281
            +     W E      G     G             L L+ + K++R++    ++    G
Sbjct: 493 GINTAKQWPEWPAKLEGKIVTRGSIHGGSWQLQVPELVLDGNVKQNRVTARGSLTGNAAG 552

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
              I    L      +  D   +     ++  LL+ + +  +  
Sbjct: 553 QWHIPGINLALGR--NKLDMKGE----LNDNWLLDANVDAPQLD 590


>gi|51594805|ref|YP_068996.1| hypothetical protein YPTB0453 [Yersinia pseudotuberculosis IP
           32953]
 gi|51588087|emb|CAH19693.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
          Length = 1312

 Score = 39.1 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 105/344 (30%), Gaps = 45/344 (13%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL     DFR   + Q   I G+++ + G  ++ I             +    + 
Sbjct: 269 ALFAKPLLPALPDFRLPLDLQIEEISGQQLRLTGDNEVLISSLLLQASTQDQRITLDTLE 328

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN----------FYLSSKG 120
           I   + G        L+ +     +++  + +  +  ++  L             L+  G
Sbjct: 329 IKSPQGGLSAQGQATLADKWPLDLVVNSALNIDSLKGEKVKLTVGGALREELKVTLNLSG 388

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +      T      + L  + ++  +++      +  Y +++L ++++ +  +    +
Sbjct: 389 PVSAQLETETSLAKAGLPL-SLTLQSKQLRWP-LTGEPQYQMNNLRMRLNGQATDYALSI 446

Query: 181 SIDSIKGS-----VIAEGTGN---FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             D             EG GN   F+  R               +  +  +   +   + 
Sbjct: 447 RSDIKGTDLPPAVFTLEGKGNVEQFNLTRLRLAALQGHTDLTGVVDWRQAISWNSVLTLS 506

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281
            +     W E      G     G             L L+ + K++R++    ++    G
Sbjct: 507 GINTAKQWPEWPAKLEGKIVTRGSIHGGSWQLQVPELVLDGNVKQNRVTARGSLTGNAAG 566

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
              I    L      +  D   +     ++  LL+ + +  +  
Sbjct: 567 QWHIPGINLALGR--NKLDMKGE----LNDNWLLDANVDAPQLD 604


>gi|153950336|ref|YP_001402578.1| hypothetical protein YpsIP31758_3624 [Yersinia pseudotuberculosis
           IP 31758]
 gi|152961831|gb|ABS49292.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           31758]
          Length = 1312

 Score = 39.1 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 105/344 (30%), Gaps = 45/344 (13%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL     DFR   + Q   I G+++ + G  ++ I             +    + 
Sbjct: 269 ALFAKPLLPALPDFRLPLDLQIEEISGQQLRLTGDNEVLISSLLLQASTQDQRITLDTLE 328

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN----------FYLSSKG 120
           I   + G        L+ +     +++  + +  +  ++  L             L+  G
Sbjct: 329 IKSPQGGLSAQGQATLADKWPLDLVVNSALNIDSLKGEKVKLTVGGALREELKVTLNLSG 388

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +      T      + L  + ++  +++      +  Y +++L ++++ +  +    +
Sbjct: 389 PVSAQLETETSLAKAGLPL-SLTLQSKQLRWP-LTGEPQYQMNNLRMRLNGQATDYALSI 446

Query: 181 SIDSIKGS-----VIAEGTGN---FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             D             EG GN   F+  R               +  +  +   +   + 
Sbjct: 447 RSDIKGTDLPPAVFTLEGKGNVEQFNLTRLRLAALQGHTDLTGVVDWRQAISWNSVLTLS 506

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281
            +     W E      G     G             L L+ + K++R++    ++    G
Sbjct: 507 GINTAKQWPEWPAKLEGKIVTRGSIHGGSWQLQVPELVLDGNVKQNRVTARGSLTGNAAG 566

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
              I    L      +  D   +     ++  LL+ + +  +  
Sbjct: 567 QWHIPGINLALGR--NKLDMKGE----LNDNWLLDANVDAPQLD 604


>gi|186893814|ref|YP_001870926.1| hypothetical protein YPTS_0483 [Yersinia pseudotuberculosis PB1/+]
 gi|186696840|gb|ACC87469.1| protein of unknown function DUF490 [Yersinia pseudotuberculosis
           PB1/+]
          Length = 1312

 Score = 39.1 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 105/344 (30%), Gaps = 45/344 (13%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL     DFR   + Q   I G+++ + G  ++ I             +    + 
Sbjct: 269 ALFAKPLLPALPDFRLPLDLQIEEISGQQLRLTGDNEVLISSLLLQASTQDQRITLDTLE 328

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN----------FYLSSKG 120
           I   + G        L+ +     +++  + +  +  ++  L             L+  G
Sbjct: 329 IKSPQGGLSAQGQATLADKWPLDLVVNSALNIDSLKGEKVKLTVGGALREELKVTLNLSG 388

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +      T      + L  + ++  +++      +  Y +++L ++++ +  +    +
Sbjct: 389 PVSAQLETETSLAKAGLPL-SLTLQSKQLRWP-LTGEPQYQMNNLRMRLNGQATDYALSI 446

Query: 181 SIDSIKGS-----VIAEGTGN---FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             D             EG GN   F+  R               +  +  +   +   + 
Sbjct: 447 RSDIKGTDLPPAVFTLEGKGNVEQFNLTRLRLAALQGHTDLTGVVDWRQAISWNSVLTLS 506

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281
            +     W E      G     G             L L+ + K++R++    ++    G
Sbjct: 507 GINTAKQWPEWPAKLEGKIVTRGSIHGGSWQLQVPELVLDGNVKQNRVTARGSLTGNAAG 566

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
              I    L      +  D   +     ++  LL+ + +  +  
Sbjct: 567 QWHIPGINLALGR--NKLDMKGE----LNDNWLLDANVDAPQLD 604


>gi|170025984|ref|YP_001722489.1| hypothetical protein YPK_3769 [Yersinia pseudotuberculosis YPIII]
 gi|169752518|gb|ACA70036.1| protein of unknown function DUF490 [Yersinia pseudotuberculosis
           YPIII]
          Length = 1291

 Score = 39.1 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 105/344 (30%), Gaps = 45/344 (13%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL     DFR   + Q   I G+++ + G  ++ I             +    + 
Sbjct: 248 ALFAKPLLPALPDFRLPLDLQIEEISGQQLRLTGDNEVLISSLLLQASTQDQRITLDTLE 307

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN----------FYLSSKG 120
           I   + G        L+ +     +++  + +  +  ++  L             L+  G
Sbjct: 308 IKSPQGGLSAQGQATLADKWPLDLVVNSALNIDSLKGEKVKLTVGGALREELKVTLNLSG 367

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
             +      T      + L  + ++  +++      +  Y +++L ++++ +  +    +
Sbjct: 368 PVSAQLETETSLAKAGLPL-SLTLQSKQLRWP-LTGEPQYQMNNLRMRLNGQATDYALSI 425

Query: 181 SIDSIKGS-----VIAEGTGN---FDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
             D             EG GN   F+  R               +  +  +   +   + 
Sbjct: 426 RSDIKGTDLPPAVFTLEGKGNVEQFNLTRLRLAALQGHTDLTGVVDWRQAISWNSVLTLS 485

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281
            +     W E      G     G             L L+ + K++R++    ++    G
Sbjct: 486 GINTAKQWPEWPAKLEGKIVTRGSIHGGSWQLQVPELVLDGNVKQNRVTARGSLTGNAAG 545

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
              I    L      +  D   +     ++  LL+ + +  +  
Sbjct: 546 QWHIPGINLALGR--NKLDMKGE----LNDNWLLDANVDAPQLD 583


>gi|157368707|ref|YP_001476696.1| hypothetical protein Spro_0460 [Serratia proteamaculans 568]
 gi|157320471|gb|ABV39568.1| protein of unknown function DUF490 [Serratia proteamaculans 568]
          Length = 1256

 Score = 39.1 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 42/345 (12%), Positives = 100/345 (28%), Gaps = 46/345 (13%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71
            F  PL  D  D R   +     I G+++ + G   + I             +   +  +
Sbjct: 213 LFAKPLLPDLPDIRLPLDITVKEISGEQLRLTGDTDVLITSLLLQASTLDQHIQLDNFDV 272

Query: 72  DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF----------YLSSKGV 121
              +          L+       + +  + +  +  ++  LN            L+  G 
Sbjct: 273 KSPQGTLSAQGQATLTGSWPVEMVANSTLNIDPLKGEKVKLNIGGGLREELKVALNLSGP 332

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
                   T      + L  + ++  ++K      +  Y ++D  L+ + +  +      
Sbjct: 333 VGAQLDLQTQLAEAGLPLA-LTLQSKQLKWP-LSGESQYQINDFRLRFNGKATDYALSTR 390

Query: 182 IDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
            +          +  +G GN +  +      A         +L      +++   + L G
Sbjct: 391 ANIKGQDLPPAVLTLDGKGNVEQFKLDRLRLAALQGNTDLTALVDWSKAISWNSQLTLSG 450

Query: 237 ---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---GN 282
                 W E      G  +  G            +L L+ + K+++++    +S    G 
Sbjct: 451 INTAKQWPEWPAKLDGKITTRGSLHGGSWQLQVPVLQLDGNVKQNKVTARGTLSGNAAGQ 510

Query: 283 VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
            +I    L      +  +   +      +E   N   +      D
Sbjct: 511 WKIPGIDLTLGR--NQLNVKGQL-----DEKSWNLDADIDAPRLD 548


>gi|281421311|ref|ZP_06252310.1| conserved hypothetical protein [Prevotella copri DSM 18205]
 gi|281404846|gb|EFB35526.1| conserved hypothetical protein [Prevotella copri DSM 18205]
          Length = 1588

 Score = 39.1 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 40/404 (9%), Positives = 110/404 (27%), Gaps = 47/404 (11%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDW----TDFREDFERQATLIVGKKIAVKGGIKI 56
           +++R     G      LV    + + +          +     A+   G  I+VK   ++
Sbjct: 2   LMKRYAKWAGITVLTPLVLILLLSILLYLPPVQNWAVKQVAAYASESTGMDISVK---QV 58

Query: 57  HILPFPSVFFKDIRIDQK-------------EDGSFESKIEGLSMRAEFLPLLSGEIRVF 103
            ++    +  + +++ Q                    + I+ + +  + LPL   ++ V 
Sbjct: 59  RLVFPLKLGVEGVKVLQPIDSLKNSPNLALRNKRDTVADIQKIVVDVQLLPLFESQVMVD 118

Query: 104 DMYIDQPHLNFY------LSSKGVSNWFQRKSTMD-MIHNVILEKIHVKGGRIKIIDQES 156
           ++   Q  +N             V N   +   +D     V +    +   R+ +   ++
Sbjct: 119 ELNFTQMKVNTTNFIHEARIKGNVGNLRLKAHGIDLGKEKVRVNHALLADARLSVELSDT 178

Query: 157 DQVYFLSDLNL------QISARFLNIISPLSIDSIKGSVIAE---GTGNFDNKRSAFKIT 207
                    N       ++  +  + +  +  D+++ +           + +        
Sbjct: 179 VPPDTTPSTNFWKVNIEKLKLKNTDFVLHMPGDTLQVNAYFGDAVAQTTYLDLYKGLYQI 238

Query: 208 ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY-----SGVFSVAGDFSKLLN 262
            +   K   ++           +  +         K   +          +     K   
Sbjct: 239 GHLDWKKGKVNYDQNYIRPVSGMDFNHIALAALTLKADSFYYCDSKIDVKIREAQFKE-- 296

Query: 263 LELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN-LLNFSENG 321
            +   +  +L G F +    +++    L++         D       + +   L     G
Sbjct: 297 -KSGLQVDQLYGRFVMDSVKLQLPDICLRTPYSQLQATVDMDMNAFDEVKPGKLMAQLKG 355

Query: 322 AESMHDLNETDFFEEEEKKNKNDDLKKDDI--QYSVNKKEEKDN 363
           A    DL             K        I   +  N ++   +
Sbjct: 356 ALGRSDLFLFAGDAFPSAMKKKWPFYPMKIEGSFKGNMQQASFS 399


>gi|289665394|ref|ZP_06486975.1| hypothetical protein XcampvN_20572 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 811

 Score = 39.1 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/360 (9%), Positives = 91/360 (25%), Gaps = 58/360 (16%)

Query: 36  FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95
                  +  +++ ++G  ++ +  F  +    + I         +  E   +R     +
Sbjct: 226 VADHVQDLALRQLHIEGDGQLQLGLFKQLRGGPMEI-----FPSRAVFESARVRWGEHEV 280

Query: 96  LSGEIRVFDMYI-------------------------DQPHLNFYLSSKGVSNWFQRKST 130
           L       +  I                         D   L+   +++G      R   
Sbjct: 281 LRNGQLRIEASIARHSPDQASGRAVLQLTDALIALHGDTAALDVTRNAQGRHTVATRAGK 340

Query: 131 MDMIHNVI-LEKIHVKGGRIKII----DQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
                 +  +      G +++      D        L +L  Q+       +     +  
Sbjct: 341 GRADGELRWIRGALQSGSQLRWRAPLHDSTRAPAALLGELTAQLQVDQNMRVQVRMPEPA 400

Query: 186 KGSVIAEGTGNFDNKRSAF-KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
              +  +       ++  F  + +  P  +    L  QL  L +                
Sbjct: 401 DAGLTLDADLRVQGRQLPFQSMRSLLPRTSGHARLHWQLSSLRW-----------IPTLF 449

Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
           P      ++ GD     +L++   +       ++     ++      +I   +S D    
Sbjct: 450 PDVD-WLTLEGDGLVDADLQIDRGQLAAGSRLQVPHVQAQVGVM-GHAITGQASADLRVD 507

Query: 305 TKVSQDEENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDN 363
              +     +L          H D     F +  + +         D+Q   + +     
Sbjct: 508 ADANGQLLPVLALKMQQFSIAHSDATTRPFVQGSDLRL--------DLQTRADARNLSSL 559


>gi|189485648|ref|YP_001956589.1| hypothetical protein TGRD_645 [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287607|dbj|BAG14128.1| hypothetical protein [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 1531

 Score = 39.1 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 92/292 (31%), Gaps = 27/292 (9%)

Query: 32  FREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAE 91
           F    ++  +   G ++        +ILPF S+ F ++      D      I+ ++ +  
Sbjct: 29  FVPFIQKYISDKTGYEVKFD---NFYILPF-SITFANV------DMDNMIAIQKITFKLS 78

Query: 92  FLPLLSGEIRV----FDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGG 147
            +               + I +  ++   + K  +    ++S    +    +  I V   
Sbjct: 79  PVKFFVHITAPLNCISQINISKLEISLNENHKDKNVSSDKRSVDLELPKSEIA-IFVDEA 137

Query: 148 RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207
            +     ++D    L  ++  I      I     I ++   V      +    R+   I 
Sbjct: 138 VV-----KNDNSRLLKIIDADILINHDKITLESVICALGIPVKVSSRID----RAKGNIF 188

Query: 208 ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA 267
               A      + + L       +  L        ++ IYSG F +         +  + 
Sbjct: 189 NTSSAFTAKNKIDMLLKSTGTIDLSSLSITQNITVEKLIYSG-FKLIAPSGSFSKIRDAY 247

Query: 268 KKSRLS--GNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNF 317
           K + +   G F+ +  +   +  K +  +  ++        ++  E+  ++ 
Sbjct: 248 KINLVGGFGKFEFNSFSGSATEAKPEIDISKTNKSMSGDISLNFKEQYSISV 299


>gi|157149604|ref|YP_001456653.1| hypothetical protein CCC13826_0632 [Campylobacter concisus 13826]
 gi|112800218|gb|EAT97562.1| hypothetical protein CCC13826_0632 [Campylobacter concisus 13826]
          Length = 309

 Score = 39.1 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/174 (12%), Positives = 47/174 (27%), Gaps = 3/174 (1%)

Query: 51  KGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP 110
           KG + + +  + SV  +D+       G      + +    +     S  +      ID P
Sbjct: 137 KGNLDVVLGDYESVTARDLEFIAGLTGPSAITNKAVKAAWDRFGKKSSGVTSDVTKIDNP 196

Query: 111 HLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
            +         +N    +     + N+ +  +  K G +        +     D    + 
Sbjct: 197 AIEVVKDKDSAANVALYEKYKKELSNLEISSLFNKDGTLTKEAILKREQIIAGD---NLG 253

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
              L         +IK     +   N       +    N    +     K ++ 
Sbjct: 254 NIELIKELTKDGSNIKDWAKFKIDANKAEIHFYYNEKNNRAYYDMDYKTKFKVG 307


>gi|91200045|emb|CAJ73087.1| unknown protein [Candidatus Kuenenia stuttgartiensis]
          Length = 233

 Score = 39.1 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 30/93 (32%), Gaps = 4/93 (4%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED--GSFESKI 83
                  +   E  A   +   + +   + + I    ++  K++ +D  E        K+
Sbjct: 90  LFGDRALKVGIEAGAERSMQVGVHLD-DVSLSIFGG-TLNLKNLIVDNPEGYQHPNVLKV 147

Query: 84  EGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
               +      LLS  + V  + +D  +L    
Sbjct: 148 GNTYISVNIRTLLSDTVEVKKIQLDDVYLTIEQ 180


>gi|326402809|ref|YP_004282890.1| hypothetical protein ACMV_06610 [Acidiphilium multivorum AIU301]
 gi|325049670|dbj|BAJ80008.1| hypothetical protein ACMV_06610 [Acidiphilium multivorum AIU301]
          Length = 391

 Score = 39.1 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/256 (10%), Positives = 77/256 (30%), Gaps = 21/256 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV---GKKIAVKGGIKIHI 58
           +RR++  L  +  +  +G   +  +            QA   +   G  ++  G +    
Sbjct: 1   MRRLVRFLSLVVVLAALGWLGLWWY--AESRLALAVDQAAARLHAAGWTVS-HGAVTRGT 57

Query: 59  LPFPS-VFFKDIRIDQK--EDGSFESKIEGLSMRAEFLPLLSGEIRVF---DMYID-QPH 111
            PF + V   D+R+     +  +   +I  + +       L+ ++       M ++  P 
Sbjct: 58  SPFVADVRVADLRLTPPVADGPAPTLEIPAVDLVVHPAAPLTLDLGFATVWRMALEGGPS 117

Query: 112 LNFY---LSSKGVSNWFQRKSTMDMI-----HNVILEKIHVKGGRIKIIDQESDQVYFLS 163
                  +++    +                 +    ++  +     ++   +       
Sbjct: 118 FTLRFGSIAADDRFDLADLLHHAPDPLRAGAFHATDLRVDSENTNFTLVSIAAIDASGTR 177

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
           + +    +    +   L   ++    +  G   F  K +A  +         A+  ++ L
Sbjct: 178 NPDAGPDSMAATLHESLRGLALSPLFVTLGNLPFGGKLTALSVDLALSGPAAALPARLTL 237

Query: 224 FPLAYPIIIDLFGNLF 239
            P A  +      NL 
Sbjct: 238 PPGARWLAPGAAANLP 253


>gi|167854541|ref|ZP_02477322.1| hypothetical protein HPS_02144 [Haemophilus parasuis 29755]
 gi|167854296|gb|EDS25529.1| hypothetical protein HPS_02144 [Haemophilus parasuis 29755]
          Length = 905

 Score = 39.1 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 46/325 (14%), Positives = 108/325 (33%), Gaps = 34/325 (10%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIA----VKGGIKI 56
           MLRR L+ +G + ++++ G       +  +              G KI     ++  ++ 
Sbjct: 1   MLRRSLLIIGAVLAILMAGGA---SLLSGSQLASAINLVLP--TGWKIETPYGIEPHLEK 55

Query: 57  HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
            ILP  +++                  E LS++     +    IR+    ID   ++ + 
Sbjct: 56  AILPQFTLY---------YQHCPIISAESLSVQW----IDERSIRLNQATIDYACVSLFP 102

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNI 176
            S+  S     ++   ++  +    I +K   +   +  ++    L  L LQ  +     
Sbjct: 103 KSE-KSQTDPTETIKTILALLPEGNIEIK--SLAWKNLPNEMHERLKGL-LQSPSEIKFA 158

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAI-SLKIQLFPLAYPIIIDLF 235
                + +           NF N++ + +++       + + +L  QL      +   L 
Sbjct: 159 FFQQKLTAYIKQQAVTFDANFANQQLSAQLSYQPNKDEQHLATLSAQLDEHFLALPQQLS 218

Query: 236 GNLFWNEKQPIYS-GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
            N  WN  + + +                +      +L GN++++      +++ L    
Sbjct: 219 LNYQWNLPKTLIAEPSLQQGHSTLSWHKQDQ-----QLHGNWQLNSAITPENQFNLPFHF 273

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSE 319
              S   + K K+     N    + 
Sbjct: 274 DTQSLTIE-KGKIDWQLSNDFPLNA 297


>gi|114655123|ref|XP_001144198.1| PREDICTED: AHNAK nucleoprotein 2 [Pan troglodytes]
          Length = 2600

 Score = 38.7 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/297 (11%), Positives = 89/297 (29%), Gaps = 29/297 (9%)

Query: 87  SMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKG 146
            +    L +   +++   + +  P L+       V       S   +  ++   K  +  
Sbjct: 700 KVEMPSLKMPKVDLKGPQIDVKGPKLDLKGPKAEVRVPDVEVSLPSVEVDIQAPKAKLDA 759

Query: 147 GRIKIIDQESDQVYFLSDLNLQISAR--------FLNIISPLSIDSIKGSVIAEGTG-NF 197
           GR++     +D+     D   ++                   S+D     V A+ +  + 
Sbjct: 760 GRLEGDLSLADKDVTAKDSKFKMPKFKMPSFRVSAPGKSMEASVDVSAPKVEADVSLPST 819

Query: 198 DNKRSAFKITANFPAKNKAI---SLKIQLFPLAYPIIIDLFGNL-----------FWNEK 243
                   ++   P+ +  +    + ++L     P    L G+L             + K
Sbjct: 820 QGDLKTTDLSIQPPSADLKVQAGQVDVKLLEGHVPEEAGLKGHLPKMQTPSLKMPKVDLK 879

Query: 244 QPIYSG---VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTD 300
            P          +     ++   ++      +  + +     +  +R +    + +    
Sbjct: 880 GPEIDIKGPKLDLKDPKVEVTAPDVEVSLPSVEVDVEAPGAKLDGARLEGDLSVADKDVT 939

Query: 301 E-DNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKND--DLKKDDIQYS 354
             D+K K+ + +      S  G      ++ ++   E +    +   DLK  D+   
Sbjct: 940 AKDSKFKMPKFKMPSFGVSAPGKSIEASVDVSELKAEADVSLPSMQGDLKTTDLSIQ 996


>gi|313676398|ref|YP_004054394.1| hypothetical protein Ftrac_2307 [Marivirga tractuosa DSM 4126]
 gi|312943096|gb|ADR22286.1| protein of unknown function DUF490 [Marivirga tractuosa DSM 4126]
          Length = 1638

 Score = 38.7 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 48/358 (13%), Positives = 119/358 (33%), Gaps = 24/358 (6%)

Query: 35  DFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLP 94
              +  +     K  +   + I  L    +        +  +         +     + P
Sbjct: 30  YATKFVSERTQTKFEID-RLYITFLGAAQIE---GLYAEDSNQDTLIYANSILADVAWKP 85

Query: 95  LLSGEIRVFDMYIDQPHLNFYLSS-KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIID 153
           LL G + V ++ ++      + +S     N+           +   EK         I  
Sbjct: 86  LLDGNVDVKNLELEGITGKVHNNSVDSSYNFQFLIDAFANADSTSTEKETDTTSSTTI-- 143

Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIK---GSVIAEGTGNFDNKRSAFKITANF 210
             + +   L +++L      + + + L +  ++    +   + + +FD +    K     
Sbjct: 144 --NVRHILLENIDLNFQDISVEMKTYLKLGELELSLNTFNLD-SLHFDVEEFVLKNVKAN 200

Query: 211 PAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS 270
            ++  A     +    +    I++   L  NE    Y  +F      S +  L++   K 
Sbjct: 201 YSQGLAFPPSEEDTTESTLPKINVQ-KLSLNEIDLEYETLFDRLQMSSLINLLDIRNAKV 259

Query: 271 RL-SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH--- 326
            L     ++   + +IS ++++  + + ST E+N    S  E        N         
Sbjct: 260 DLAKNEIELDKFDNKISHFRMRLPISSDSTQEENDESPSPFEFPDYKIKLNTFNFNLADL 319

Query: 327 ------DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKM 378
                  +NE + F  E+ + ++  L   + QY     + ++ S   ++ ++F   ++
Sbjct: 320 DIKSEGKINEIEGFNPEDMQFQDIKLNLVNAQYLAEDLDIENFSFSAKDSKSFELKEL 377


>gi|117925158|ref|YP_865775.1| membrane protein-like protein [Magnetococcus sp. MC-1]
 gi|117608914|gb|ABK44369.1| membrane protein-like protein [Magnetococcus sp. MC-1]
          Length = 1144

 Score = 38.7 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 38/345 (11%), Positives = 103/345 (29%), Gaps = 33/345 (9%)

Query: 1   MLRRVL--IGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHI 58
           ++R  +  +       V +   +     +D  D R+  E + T  +G+ +++     + +
Sbjct: 5   IMRWCIALLLGLPALLVAVALLWFAIRPLDIIDLRKLSEIELTERLGQPVSIT---TMQL 61

Query: 59  LPF---PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLP---LLSGEIRVFDMYIDQPHL 112
           +P      +  + + +  ++      +I    +R +      LL G I +  + ++   +
Sbjct: 62  VPSSALLDLRLQGVTLFDQQRSRPLVQIGETRIRVKTWNLSTLLQGRIPLEIVILNGNAV 121

Query: 113 NFYLSSK------GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ-VYFLSDL 165
                +       G +    +      +    + ++           Q +      L  L
Sbjct: 122 AINKGTDREWFIAGQAVSVWQAKFQQPLPRPAVHQVD----TGSWQQQLAGYAAQLLEHL 177

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ--L 223
            +         +  L + S   ++ A G  N  + +   +                   +
Sbjct: 178 QITTVRLGKLSLDVLQMPSAGSTIQAVGKLNLIDAQLHNRSGETPIQWAMHGDFTPNWGV 237

Query: 224 FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDF-----SKLLNLELSAKKSRLSGNFKI 278
                P+   L G L     +   +G  +                 L+  +  + G F++
Sbjct: 238 EQGDAPVTYTLEGALQ-QRGRWHLAGKVAHLRPDRWTNLLGKAGASLAGLQFPMQGEFRL 296

Query: 279 SDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAE 323
             G+    + + + +L +   D     +       + N S  G  
Sbjct: 297 HGGDGEPWKSRWKVVLGSGVWDTHGLFRW---PIPISNLSAEGQA 338


>gi|238756429|ref|ZP_04617738.1| hypothetical protein yruck0001_33840 [Yersinia ruckeri ATCC 29473]
 gi|238705359|gb|EEP97767.1| hypothetical protein yruck0001_33840 [Yersinia ruckeri ATCC 29473]
          Length = 1262

 Score = 38.7 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 54/410 (13%), Positives = 121/410 (29%), Gaps = 63/410 (15%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71
            F  PL     DFR   + Q + I  +++ + G  ++ I             V  + + I
Sbjct: 220 LFAKPLLPALPDFRLPIDLQLSEINAQQLRLTGDSEVLITSLILKASTEEQHVKLETLEI 279

Query: 72  DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY---LSS---------- 118
              + G   S    L+ +     +++  I +  +  ++  LN                  
Sbjct: 280 KSPQGGLTASGKATLADKWPLELVVNSTINIEPLKGERIKLNLAGGLRDQLTVGLNLSGP 339

Query: 119 -KGVSNWFQRKSTMDMIHNVILEKIHVK-----GGRIKIIDQESDQVYFLSDLNLQISAR 172
                      +   +   + L+   ++       + +I + ++      +D  L I A 
Sbjct: 340 VSAQLEAQAELAKAGLPLALTLQSKQLRWPFTGDAQFQIDNFKTRLNGQATDYALSIRAD 399

Query: 173 FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPII 231
                 P ++         +G GN +      ++       N  ++  +     +++  +
Sbjct: 400 VKGADIPPAV------FTFDGKGNLEQFTLT-RLRLAALQGNTDLTGVVDWSKAVSWNSV 452

Query: 232 IDLFG---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD 280
           + L G      W E      G     G             L L+ + K++R++    ++ 
Sbjct: 453 LTLNGINTAKQWPEWPGKLDGKIVTRGSLHGGSWQLNVSELTLDGNVKQNRVTARGSLTG 512

Query: 281 ---GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEE 337
              G   I    L      +  D         +++ +L+ + +       L         
Sbjct: 513 NAAGQWHIPGINLALGR--NQLDMKG----DLNDKWVLDVNVDAPRLDGALPGLAGVVRG 566

Query: 338 EKKNKN--------DDLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMI 379
             K +          DL   D+Q+     +      D  + E   G   I
Sbjct: 567 HLKLRGNLTAPQLLADLTATDLQWQALHIQRIKVDGDVRSAEQIQGQLAI 616


>gi|257468109|ref|ZP_05632205.1| hypothetical protein FulcA4_02157 [Fusobacterium ulcerans ATCC
           49185]
          Length = 570

 Score = 38.7 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 63/169 (37%), Gaps = 10/169 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++++ L  +  +++VG +     I     +   E++ T I   K+ +    K+   PF
Sbjct: 1   MKKIIMYLLAVIILIVVGVYAARNII----VKNILEKKLTEINKGKVDIG---KVEFSPF 53

Query: 62  P-SVFFKDIRI-DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
              +  +DI    Q+        ++  +   +   +   ++ + + +I          + 
Sbjct: 54  NKRIVVRDIEATSQRNSMKNFVTVKEFNADYDIY-ISDKKVLISEAHIINVDFLTDRKTD 112

Query: 120 GVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ 168
           G     ++         V  ++   K   +  I+        ++DLNL+
Sbjct: 113 GAIGIKEKTPLDASQVLVPDDEEKNKEVLVTEIENSYLDNMKINDLNLE 161


>gi|157368543|ref|YP_001476532.1| coagulation factor 5/8 type domain-containing protein [Serratia
           proteamaculans 568]
 gi|157320307|gb|ABV39404.1| coagulation factor 5/8 type domain protein [Serratia proteamaculans
           568]
          Length = 1967

 Score = 38.7 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 46/355 (12%), Positives = 92/355 (25%), Gaps = 39/355 (10%)

Query: 49  AVKGGIKIHILPFPSVFFKDIRIDQKEDGSF-----ESKIEGLSMRAEFLPLLSGEIRVF 103
           A+ G   +      +  ++ +    K+            I G S+R  +       + + 
Sbjct: 286 ALDGDFSVSFWVKANAQYEGVIFSNKDWRVGGNIGWVIGISGKSLRWNWQGAYGRRLDMA 345

Query: 104 DMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ----- 158
           D+ I     +    +   S              V +         +        +     
Sbjct: 346 DIPIADFKWHHVAIAHDRSRDAVFYLDGQEQSRVTIANSGHTNTHLDFNIGADGRGEYRL 405

Query: 159 ----VYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKN 214
               +  ++  N  ISA+          + +          +F++  +   +       +
Sbjct: 406 ANTFLDRVNITNTIISAQQARQEYDEYYEKL-TPAPISLHYDFNDHLNDASVNGYDAVIH 464

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV----AGDFSKLLNLELSAKKS 270
                       A+    D F  +   E Q   SG FS+               +S K  
Sbjct: 465 GKEEYVSGFANSAFLFNGDSFITIPNPELQNDLSGDFSLCFWIKAPTGNKEQTIISNKDW 524

Query: 271 RLSGNFKISDGNVRISRYKLQ-SILPNSSTDEDNKTKVSQDEENLLNFSENGAESM--HD 327
              GN     G +  +              D         D+  +        +    HD
Sbjct: 525 NSGGNPGWQLG-IHKNALSWNWKGDSAGRYDLA-------DDYPIYVADGRWHQITVSHD 576

Query: 328 -LNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNS--HDKENQENFSGDKMI 379
                 FF++   K +       DI++S +     D +   D   Q   S + MI
Sbjct: 577 RFGNACFFKDGVLKQQI------DIRFSGDTATALDIAVGADAMGQYRLSNETMI 625


>gi|237736783|ref|ZP_04567264.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
 gi|229420645|gb|EEO35692.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
          Length = 564

 Score = 38.7 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 43/132 (32%), Gaps = 9/132 (6%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M +++ I +G L  ++    F+    I     ++  E + T I   K+ + G +      
Sbjct: 1   MKKKIGIAVGILVVLLGGVYFSKDYII-----KKVLENKLTEINKGKVDI-GSVDFSPFS 54

Query: 61  FPSVFFKDIRIDQKEDG-SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
              +  +DI I  ++DG      I       +       ++ V               S 
Sbjct: 55  K-KIVIEDIDITSRKDGMKNFISIGKFETDYDIY-FKDKKVLVSRADFSDVKFMTPRDSD 112

Query: 120 GVSNWFQRKSTM 131
           G + +   +   
Sbjct: 113 GSTGYVVEEKND 124


>gi|159185292|ref|NP_355553.2| hypothetical protein Atu2616 [Agrobacterium tumefaciens str. C58]
 gi|159140551|gb|AAK88338.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 1386

 Score = 38.7 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 44/382 (11%), Positives = 101/382 (26%), Gaps = 38/382 (9%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFER-QATLIVGKKIAVKGGIKIHILPFP 62
           R+L  LG+     +V      LF+ +T         Q +      +       I I P  
Sbjct: 6   RLLKWLGYAALCCVVLVLLAVLFVGFTPMGARIAANQISS-----LVSTPDQTIEISPPG 60

Query: 63  SVFFKDIRIDQ---KEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS- 118
            +    +R+D     +     +++  +++    L LL+G      +      ++      
Sbjct: 61  GLLTGRLRLDNVTLSDRQGPYARLNQIAVDWSPLSLLAGTFHADHVSAG--SIDVERQPL 118

Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
                  +      +   ++++        I +      + + L+      +A+    +S
Sbjct: 119 PAQQTTGKSSGGSSLPIEIVIDNFSFPD--ISLGQSLLGRAFDLTAEGNLKAAQDDMRLS 176

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNL 238
             +               F    +  K+ A        +   +   P    + IDL G  
Sbjct: 177 LTAHRRNAVDAEVNADVAFLPNENVLKLKAEMKEPEGGLLATLLSLPGTPAVAIDLNGEG 236

Query: 239 FWNEKQPIYSGVFS-----------VAGDFSKLLNLELSAKKSRL----------SGNFK 277
             +       G  +           + GD            +  L          +G  K
Sbjct: 237 PLSSWTGTLRGNVAGNAVVNVTGRHLLGDDGTRRIEIAGGGQPDLLLPPAFRQLFAGETK 296

Query: 278 ISDGNVRISRYKLQSILP---NSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF 334
           +        + +++         +        V  + +N L  +  G     D       
Sbjct: 297 LDANATLYPQGRIEIGSSTLETGALLLTASGTVDPNGQNDLAANLIGTAGPVDFRWPLGN 356

Query: 335 EEEEKKNKNDDLKKDDIQYSVN 356
            E +      DL       + +
Sbjct: 357 GEIQALINGLDLSLKGGADAAH 378


>gi|289669505|ref|ZP_06490580.1| hypothetical protein XcampmN_13663 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 813

 Score = 38.7 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 34/360 (9%), Positives = 90/360 (25%), Gaps = 58/360 (16%)

Query: 36  FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL 95
                  +  +++ ++G  ++ +  F  +    + I         +  E   +R     +
Sbjct: 228 VADHVQDLALRQLHIEGDGQLQLGLFKQLRGGPMEI-----FPSRAVFESARVRWGEHEV 282

Query: 96  LSGEIRVFDMYI-------------------------DQPHLNFYLSSKGVSNWFQRKST 130
           L       +  I                         D   L+   +++G      R   
Sbjct: 283 LRNGQLRIEASIARHSPDQASGRAVLQLTDALIALHGDTAALDVTRNAQGRHTVATRAGK 342

Query: 131 MDMIHNVI-LEKIHVKGGRIKII----DQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
                 +  +      G +++      D        L +L  Q+       +     +  
Sbjct: 343 GRADGELRWIRGALQSGSQLRWRAPLHDSTRAPAALLGELTAQLQVDQNMRVQVRMPEPA 402

Query: 186 KGSVIAEGTGNFDNKRSAF-KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
              +  +       ++     + +  P  +    L  QL  L +                
Sbjct: 403 DAGLTLDADLRVQGRQLPLQSMRSLLPRTSGHARLHWQLSSLRW-----------IPALF 451

Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
           P      ++ GD     +L++   +       ++     ++      +I   +S D    
Sbjct: 452 PDVD-WLTLEGDGLVDADLQIDRGQLAAGSRLQVPHVQAQVGVM-GHAITGQASADLRVD 509

Query: 305 TKVSQDEENLLNFSENGAESMH-DLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDN 363
              +     +L          H D     F +  + +         D+Q   + +     
Sbjct: 510 ADANGQLLPVLALKMQQFSIAHSDATTRPFVQGSDLRL--------DLQTRADARNLSSL 561


>gi|301166177|emb|CBW25752.1| putative membrane protein [Bacteriovorax marinus SJ]
          Length = 429

 Score = 38.7 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 92/277 (33%), Gaps = 18/277 (6%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           ML+++ I L  +  ++L+     P  +      +   +     +G ++     I   +L 
Sbjct: 1   MLKKIFIILSSVVIILLLTLLFTPFHLFQNTLIDIVNK---KELGVELRASKPISYRLLS 57

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYI-----------DQ 109
              +  +D+++   +   FE  IE + +  +   +    ++     +            +
Sbjct: 58  ANELLVEDLQL---KVDGFEIDIEKIDLEIDPNSIFEDHLKFRKFDLIVKSLKEVESQKE 114

Query: 110 PHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQI 169
                   S         K++      V L    +    I +   + ++   +S   +++
Sbjct: 115 GKKKELKKSDQTQKVKDEKNSQGRWQKVTLSNAGISVHEILLKKYKLNE-ISISSKEVEV 173

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
           S + L +   LS+ ++  S++ E        +S          +      K++   +   
Sbjct: 174 SLKDLLVSGELSVSALTKSIVGEVNLTKKTNQSVKATLDVKKLEEVLKIFKLENVNIYGD 233

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELS 266
           + +D   ++  +          +V G   K +  +L 
Sbjct: 234 LRVDFTSSINKSNAFLKNPMSLAVNGKKLKWIGKDLD 270


>gi|213408825|ref|XP_002175183.1| pre-rRNA-processing protein crb3/ipi3 [Schizosaccharomyces
           japonicus yFS275]
 gi|212003230|gb|EEB08890.1| pre-rRNA-processing protein crb3/ipi3 [Schizosaccharomyces
           japonicus yFS275]
          Length = 438

 Score = 38.3 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 58/177 (32%), Gaps = 4/177 (2%)

Query: 19  GAFTVPLFIDWTDFRED-FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG 77
           G  TVPLF++    ++   E  A   +G    +  G++    P        I++      
Sbjct: 242 GFITVPLFVNPNTKKDTSTENSAPYALGGNGKIVDGVEGEPFPSVQ-HTSAIQVLTLSFD 300

Query: 78  SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNV 137
                            ++S ++    +   +P      +++ +           +   V
Sbjct: 301 GSLLISGDAEGTVLVWDVVSKQVLRKIVTFPKPVTFLQTTTESMQLPANLTPFPMLKRMV 360

Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
             E I +    + I D   +++  L D+ L++    L+  +     +   ++  E  
Sbjct: 361 TEEGI-LSDLSVAIEDNGVEELMQLPDI-LEVGKEILSESTESGWRAKAEALELELK 415


>gi|114565740|ref|YP_752894.1| hypothetical protein Swol_0171 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114336675|gb|ABI67523.1| hypothetical protein Swol_0171 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 1117

 Score = 38.3 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/323 (8%), Positives = 84/323 (26%), Gaps = 39/323 (12%)

Query: 46  KKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDM 105
           + + + G + ++  P  SV  +++ ++               +      +     +   +
Sbjct: 442 RNLTITGDLDVNAGPNGSVVLENVTVNGT----------TTIISGGINSVYLRNFKTTTL 491

Query: 106 YIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL 165
            I+  H    + ++G ++             +    ++  G  I ++  ++       ++
Sbjct: 492 RINNTH-EIRIIAQGTTS-------------LSSTYLNAPGQSITLVLDQNSGNPSFGNI 537

Query: 166 NLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFP 225
           N              S+     ++  +G    D        + N      + ++      
Sbjct: 538 NGNCDTLTWGAGDEFSMPFTAPNIDIQGNLVID---IGVAGSVNLNNVFYSGTITNTSGG 594

Query: 226 LAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRI 285
               + ++        +          V  +     N+        L  N   S      
Sbjct: 595 DIQALQLNTSSISESAKNDGSIETTLIVTQNKGIFNNVVAIETDPALPNNLTPSVLRNSA 654

Query: 286 SRYKLQSILP-----NSSTDEDNKTKVSQDEENLLNFSENGA--ESMHDLNETD-----F 333
           S+  +           + + +  K  +     + ++     A        N         
Sbjct: 655 SQITITFSGKALDHQAADSVKSVKIIIRAGNIDGVSSDLISAPFAINFLDNTAPNNQDTV 714

Query: 334 FEEEEKKNKNDDLKKDDIQYSVN 356
           F+++     N ++         N
Sbjct: 715 FKKDVTVRPNTEVTIASSGNEAN 737


>gi|260890303|ref|ZP_05901566.1| conserved hypothetical protein [Leptotrichia hofstadii F0254]
 gi|260859923|gb|EEX74423.1| conserved hypothetical protein [Leptotrichia hofstadii F0254]
          Length = 1504

 Score = 38.3 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 51/156 (32%), Gaps = 13/156 (8%)

Query: 138 ILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNF 197
            L  + ++ G+I  +D + D    +   N  I  +   I    S    +  V        
Sbjct: 239 ALGSLKIRNGKISYVDLDGD----IEGANAVIDLKKDKITVNASTKLKESPVTFALAYLI 294

Query: 198 DNKRSAFKITANFPAKNKAISLKIQLFPL---AYPIIIDLFGNLFWNEKQPIYSGVFSVA 254
            +++   K+ A+     +A   KI           +  +L  N    +K+    G FS +
Sbjct: 295 QDQKINLKLAADNLPFEEAARYKIIKNAKVDAQGKVTANLEVNSDIKKKKTTVDGKFSSS 354

Query: 255 GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
                  N +       +    KI+D  + ++    
Sbjct: 355 NIKLANYNFQ------NIKTAMKIADEKLTLTNTSF 384


>gi|86143904|ref|ZP_01062272.1| hypothetical protein MED217_03620 [Leeuwenhoekiella blandensis
           MED217]
 gi|85829611|gb|EAQ48074.1| hypothetical protein MED217_03620 [Leeuwenhoekiella blandensis
           MED217]
          Length = 520

 Score = 38.3 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 42/389 (10%), Positives = 108/389 (27%), Gaps = 53/389 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++ LIGL     ++   A  +  +++    R+  + +                      
Sbjct: 1   MKKFLIGLLIFIVLLGAAALYLNTYLE-NQLRDIIQTKLPS------------------S 41

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
            ++ ++++ I   +     + ++  ++R            V    +    +N     KG 
Sbjct: 42  LAIEYEELDI---DSWQGNASLKNATVRINISDS------VPKSEVKNATVNL----KGF 88

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQ-------ISARFL 174
            +W   KS     + V +E   +           ++     +  +L        +  +F 
Sbjct: 89  KHWRYFKSKDIYFNQVSIEADTLTH----YKQSSAEPKKQTNSDSLDNPLTEEKLDRKFK 144

Query: 175 NIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                L    I+                +  +    PA+++ I    +   +       +
Sbjct: 145 IKDFDLKAAYIQILKPRSSEVALHTAHFSLDLKNVTPAESQRILRPFEYESVLIKTD-SI 203

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL 294
           +      +   I    ++ +        L     +S+LS        ++  +  K+    
Sbjct: 204 YYKTNAYDALKIKHLEWNGSSLSLNETQLVTEVSRSKLSELISKERDHMNFTIKKVDISN 263

Query: 295 PNSSTDEDNKTKVSQDEENLLNFSENGAESMHDL-----NETDFFEEEEKKNKNDDLKKD 349
                + D K      +   L       +   D      N T     +  +    DL  D
Sbjct: 264 LTYGQN-DGKF---FFKAPKLTLEAPFLDIYRDKRIADDNSTKALYSKMLRELKFDLMID 319

Query: 350 DIQYSVNKKEEKDNSHDKENQENFSGDKM 378
            I          +  +++E       D +
Sbjct: 320 TIALKNGGITYTERVNNQEQAGQLYFDNL 348


>gi|294666060|ref|ZP_06731320.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292604161|gb|EFF47552.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 811

 Score = 38.3 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 32/327 (9%), Positives = 84/327 (25%), Gaps = 39/327 (11%)

Query: 31  DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE----------DGSFE 80
            F      Q   +  +++ ++G  ++ +  F  +    + I                   
Sbjct: 221 QFDRIVAEQVQAVSLRQLHIEGQGQLQLGLFKQLRGGPMEIFPSRAVFESARVRWGQDEM 280

Query: 81  SKIEGLSMRAEFL----------PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
            +   L + A              +L     +  ++ D   L+    ++G      R   
Sbjct: 281 MRNGQLRIEASIARHAPDQASGHAVLQLTDALIAVHGDTAALDVARHAQGRHTLATRPGK 340

Query: 131 MDMIHNVILEKIHVKGG-----RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
                 +   +  ++ G     R  + D        L +L  Q+       ++    +  
Sbjct: 341 GRADGELRWIRGALQPGSQLHWRAPLHDSTRASAALLGELTAQLQVDQNMRLTVSMPEPA 400

Query: 186 KGSVIAEGTGNFDNKRSAF-KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
              +  +       ++     + +  P  +    L  QL  L++                
Sbjct: 401 DAGLTLDADVRVQGRQLPVQSMRSLLPRTSGHARLHWQLSSLSW-----------IAALF 449

Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
           P      ++ G+     +L +   +       ++     ++      +I   +S D    
Sbjct: 450 PDVD-WLTLEGEGLVDADLRIDRGQLGAGSRLQVPHVQAQVGVM-GHAIAGQASADLRVD 507

Query: 305 TKVSQDEENLLNFSENGAESMHDLNET 331
              +      L          H    T
Sbjct: 508 ADANGQLLPALALQMQQFSIAHTDAPT 534


>gi|229845754|ref|ZP_04465871.1| HMW1A, high molecular weight adhesin 1 [Haemophilus influenzae
           6P18H1]
 gi|229811324|gb|EEP47036.1| HMW1A, high molecular weight adhesin 1 [Haemophilus influenzae
           6P18H1]
          Length = 1257

 Score = 38.3 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 34/341 (9%), Positives = 86/341 (25%), Gaps = 19/341 (5%)

Query: 45  GKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVF- 103
           G+   +KG   I         F+++ +            +  +         +G + +  
Sbjct: 343 GRNQTIKGQGTITSGNRKGFRFENVSL-NGLGSKGLLFTDARTSEGNISNYFNGTLNISG 401

Query: 104 --DMYIDQPHLNFYLSSKGV--SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159
             ++ +  P ++ Y  + G    N             + ++         +    +    
Sbjct: 402 KVNISMTSPRISVYKRNNGRTFWNITTLNVAKGGSFKLSIDSRGNTNSG-QYQRNKGLNG 460

Query: 160 YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISL 219
              S  N     +   +   +   SI     +     F+   S           N A S 
Sbjct: 461 ITFSGNNTFNVGKNSTVEFHID-SSIIIPGDSSNFALFNGNISVLGGGRVNFKLNAASSD 519

Query: 220 KIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFK-- 277
                 +      ++      N +    +    +  +   L     + +  ++ G     
Sbjct: 520 HPTSGVIINSKNFNVSEGSTLNLESSGSTKTAFLIKNNLTLNATGGNIQIKQIEGTDSHI 579

Query: 278 ----ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDF 333
               +++ N+      +      + T+      V Q      N +   A           
Sbjct: 580 QKGVVAEQNIIFEGGNITLGSQKAPTEIKGNVTVQQGT----NATLRSANFN-KHKGALI 634

Query: 334 FEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQENFS 374
            +     N N     D I+   N    +    +   + N +
Sbjct: 635 VKGNVTANGNLTADGDTIEIKGNLDVAQGAKFNGSTKNNLN 675


>gi|163752848|ref|ZP_02159972.1| hypothetical protein KAOT1_11847 [Kordia algicida OT-1]
 gi|161326580|gb|EDP97905.1| hypothetical protein KAOT1_11847 [Kordia algicida OT-1]
          Length = 1670

 Score = 38.3 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 51/164 (31%), Gaps = 5/164 (3%)

Query: 164  DLNLQ-ISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
            DLN +  +A   N+   ++  ++  ++I +   N +     F I      + KA+     
Sbjct: 1055 DLNAKSGNASNYNLNLAVTGQNLNLTIIGDYVANENGAPLDFDIDL-KNLELKAVEQFAS 1113

Query: 223  LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
            ++       I     L     +P   G  +       +     +    + S   K+ +  
Sbjct: 1114 MYISKTSGNISGDFKLTGTTVKPSLLGALNFNNANVTINAFNAAFALPQES--IKVDEAG 1171

Query: 283  VRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
            +  +++K+   +  +    D K           + +        
Sbjct: 1172 IYFNQFKM-LDVNKNPFVLDGKITTENLMNPAFDLTMKAKNIEV 1214


>gi|296137845|ref|YP_003645088.1| carbonate dehydratase [Tsukamurella paurometabola DSM 20162]
 gi|296025979|gb|ADG76749.1| Carbonate dehydratase [Tsukamurella paurometabola DSM 20162]
          Length = 726

 Score = 38.3 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 69/242 (28%), Gaps = 24/242 (9%)

Query: 7   IGLGFLFS----VVLVGAFTVPLFIDWTDFREDFERQATLIVGK-KIAVKGGIKIHILPF 61
             LG LF      VL G     L + W   R   E       G+  +A+ G   +     
Sbjct: 377 TILGVLFLNLLEGVLAGLVVAILLVLWRVARASIEAS-QDSAGRWHVAIDG--SLSFFSL 433

Query: 62  PSVFF--------KDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113
           P +           D+ I+   D    +  E ++          G + + D+ +    ++
Sbjct: 434 PRLSRVLASVPPGGDVAIELTVDFLDHASAEEITEWVRRYRAGGGTVTIDDLGV--AQIH 491

Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
               +       +      +          +  G  +   + +       D +  I  + 
Sbjct: 492 AAGDTSPRRTTERSAERGLLPWRAHARG-GLADGIARYHRRHA--SLLSDDFDGLIDGQR 548

Query: 174 LNIISPLSIDSIKGS--VIAEGTGNFDNKRSAFKI-TANFPAKNKAISLKIQLFPLAYPI 230
              +     DS      + A G G+    R+   +  A     +   +L   +  L    
Sbjct: 549 PEALFLTCADSRVVPNVITASGPGDLFTVRNVGNLVPAGGVDGSLEAALTYAVDNLDVNQ 608

Query: 231 II 232
           +I
Sbjct: 609 VI 610


>gi|229521610|ref|ZP_04411028.1| uncharacterized protein YtfN [Vibrio cholerae TM 11079-80]
 gi|229341204|gb|EEO06208.1| uncharacterized protein YtfN [Vibrio cholerae TM 11079-80]
          Length = 1254

 Score = 38.3 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 87/283 (30%), Gaps = 19/283 (6%)

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           FP    + +     E       ++ LS+      LL   I + ++ +    LN    ++ 
Sbjct: 61  FPRFTLQGVDYADSELNLSF-SVQKLSLAINPNCLLEPSICINELALSGVKLNLPSLAES 119

Query: 121 VSNWFQRKSTM----DMIHNVILEKIHVKGG-------RIKIIDQESDQVYFLSDLNLQI 169
            S   +  S           + L ++ ++         R+      +   +  + L +  
Sbjct: 120 ESTPDEPDSEPLGDISTPIPIRLGQLALQDIELNILGNRVAWQQLTTRASWQGNRLRIGQ 179

Query: 170 SARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYP 229
           +      ++    ++      A+   +   +          P   +     I+ F L   
Sbjct: 180 TEWQGIRLALAESEASTEPEAAQAATSDSAEPLQL-PDVMIPLHIELARFDIRDFRLEQE 238

Query: 230 IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDG---NVRIS 286
             I +  +L        +    S        L+ +L+A+   LS ++ I       V ++
Sbjct: 239 TPIIVN-HLALQATAAQHDVSISSLELSMPELDAQLNAQA-TLSQDYPIQLELRSQVHLA 296

Query: 287 RYKLQSILPNSSTDE-DNKTKVSQDEENLLNFSENGAESMHDL 328
            +K Q++   +     D   + + D       + +      D+
Sbjct: 297 DFKGQTLSLAAQGSLADLTVQANLDSLAQAQLNSHFNLLDADI 339


>gi|67458948|ref|YP_246572.1| hypothetical protein RF_0556 [Rickettsia felis URRWXCal2]
 gi|67004481|gb|AAY61407.1| unknown [Rickettsia felis URRWXCal2]
          Length = 877

 Score = 38.3 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 106/322 (32%), Gaps = 43/322 (13%)

Query: 13  FSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRID 72
           FS++L   F    F+++           T  +G      G IK++  P P +  + I+  
Sbjct: 13  FSLLLFIIFGALSFVNYNS----VTNNLTSHLGIAKENIGKIKMNKFPLPYLIIETIK-- 66

Query: 73  QKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMD 132
                  E  +E + +      L+    ++  + I         S+  V N +  +  + 
Sbjct: 67  ----EGGELDLEQIKIHFSLWSLIKFNPKINKIDILDAKFY---SNSNVLNIYNHEELIK 119

Query: 133 MIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAE 192
                 L+ I++    + II+++   +   ++  L+              +++  + I +
Sbjct: 120 NFFKYKLQNINLNVTNLSIINKQDYSILNFNNCILK------------KENALSSNYIFK 167

Query: 193 GTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFS 252
            T N+       KI+ +   ++  +   + +    Y   +         +   + SG   
Sbjct: 168 TTSNYIG-----KISGSINKRDDIVDFSLDIDNNDYGFKLS-----QIYKDFKLTSGSGE 217

Query: 253 VAGDFSKLLNLELSAKKSRLSGNFKISDG---NVRISRYKLQSILPN---SSTDEDNKTK 306
                   +   +    + L   F  ++       IS  + +  L +   +S+       
Sbjct: 218 YQIKNLASVMYNILPDLNHLFNKFNQNEAVNVKFNISNNEDEIELKDIVIASSFITGNGF 277

Query: 307 VSQDEENLL--NFSENGAESMH 326
           V+  + + +  N   +  +   
Sbjct: 278 VNIAKNDNITTNVKLDFPKIDL 299


>gi|120435917|ref|YP_861603.1| hypothetical protein GFO_1563 [Gramella forsetii KT0803]
 gi|117578067|emb|CAL66536.1| conserved hypothetical protein, secreted [Gramella forsetii KT0803]
          Length = 1680

 Score = 38.3 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 51/370 (13%), Positives = 103/370 (27%), Gaps = 28/370 (7%)

Query: 30  TDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMR 89
              ++ F        G KI +   I I       +   D+ I+  +          +S  
Sbjct: 40  NIIKDKFISSIEKKTGAKIDLD-RIFIQFNGD--IQVDDLYIEDPKG-DTIIYSNRISAN 95

Query: 90  AEFLPLLSGE-IRVFDMYIDQPHLNFYLSSKGV-----------------SNWFQRKSTM 131
               PL+ G    +  +  +    N                         +       T 
Sbjct: 96  ISVWPLIQGNGFSLNSLDANNVKANIIRKDSIKGFNYEFLMEAFASDTTQTQTTTPVDTS 155

Query: 132 DMIHNVILEKIHVKGGRIKIIDQESD--QVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189
               ++ L    +K   IK IDQ S         +L L  S   L  ++    ++I  + 
Sbjct: 156 AAPMDISLGDFDLKDFDIKYIDQVSGIDTKAKFEELKLSFSKTDLQNMAFQVSEAILNNA 215

Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                        + +  A  P       LK      +Y  + D            +   
Sbjct: 216 NISYD-QTKPFPPSEEEEAPMPVF-GIEELKFNNVSASYNSVPDSVSAQIGLNDFELAEA 273

Query: 250 VFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ 309
            F++         ++L   +  L      S GN   +  +            D K  +  
Sbjct: 274 NFNLKDSIISGSQIKLHDSRIALKMQQNTSTGNSAEAVAETTDGFEWPGWKIDIK-SIDL 332

Query: 310 DEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDKEN 369
            + N L ++ N A     + + +    +    +  D+   + +  +N  E K       N
Sbjct: 333 -QHNNLAYNVNDANVTEGVFDPNAILLDSLTLQASDIVYQNKEAKLNILELKFQEGSGFN 391

Query: 370 QENFSGDKMI 379
            + F+ + ++
Sbjct: 392 IKQFNIEALV 401


>gi|319788545|ref|YP_004148020.1| hypothetical protein Psesu_2965 [Pseudoxanthomonas suwonensis 11-1]
 gi|317467057|gb|ADV28789.1| protein of unknown function DUF490 [Pseudoxanthomonas suwonensis
           11-1]
          Length = 1274

 Score = 38.3 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 80/296 (27%), Gaps = 19/296 (6%)

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG--V 121
           +   D+         +        +  +  PLL   +R+    ++   LN   S +   +
Sbjct: 83  LVLHDLEFRY---QDYRFTARRAVLDPDIRPLLGKRLRLDAFVLEDATLNLARSDEPFEL 139

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP-L 180
             W      ++M   +  + + V G RI       + V  +  L   I      + +  L
Sbjct: 140 PRWPDSLPAIEMPLAIQADAMVVDGLRIT---SGGEPVIDIRKLRGGIDIANGGLHAEHL 196

Query: 181 SIDSIKGSVIAEGT-GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
            + S  G     G     ++ RS    TA FP  +  +  ++ L        +D+     
Sbjct: 197 EVHSDLGLFSVHGDYVPAEDYRSDLLATAVFPVADGGVPARLGLIARGDLSRMDVGIGGR 256

Query: 240 WNEKQ-PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSS 298
                    S   +      +L            +G   + +  V       Q    +  
Sbjct: 257 APRPLRASLSLGGNEDAPAWQLRARSEGLDPGLFTGAAPMEEPLVFDVAADGQGGAAD-- 314

Query: 299 TDEDNKTKV---SQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
                  +V           +          D    + +E + +     D    D 
Sbjct: 315 --ISGTARVGGQDWVVAPS-HVRLEDQVLDVDPLVLELYEGQVRLRGRADFTNPDE 367


>gi|314928106|gb|EFS91937.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1]
          Length = 281

 Score = 38.3 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 84/260 (32%), Gaps = 35/260 (13%)

Query: 12  LFSVVLVGAFTVPLFIDWTDFRED----FERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67
           L ++V++    V   I    FR              +G   +  G + IH LPF  V   
Sbjct: 50  LVALVVIALLAVVAAIVDQTFRARAEKDIAATIAKSIGANASTVG-VTIHNLPFLGVLVT 108

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127
           D  +   +    ++ ++       F  +      +     +   +   +S+ G  +W + 
Sbjct: 109 D-ELQGIDTTISKATVDRDDTTVTFRDVDIHANGIRHAREESQAVAETMSATGRIDWSEL 167

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187
                           + GG++   D  + +   ++ + +  +   ++I +   + +   
Sbjct: 168 S--------------RLAGGKVTYNDD-TGETGRVAIVTVLGARVDVSITAVPGVKTTSR 212

Query: 188 SVIAEG-TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
            V     + + D+                 + LK  L  +     +   GNL +   +  
Sbjct: 213 RVTLSSPSASLDDIPIP------------DVLLKPILDGITSRFTLPDLGNLHYESLKAT 260

Query: 247 YSG-VFSVAGDFSKLLNLEL 265
             G  FS+ G   KL +L  
Sbjct: 261 SQGLDFSLVGTGVKLSDLTG 280


>gi|313836597|gb|EFS74311.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2]
 gi|314972106|gb|EFT16203.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3]
          Length = 281

 Score = 38.3 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 84/260 (32%), Gaps = 35/260 (13%)

Query: 12  LFSVVLVGAFTVPLFIDWTDFRED----FERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67
           L ++V++    V   I    FR              +G   +  G + IH LPF  V   
Sbjct: 50  LVALVVIALLAVVAAIVDQTFRARAEKDIAATIAKSIGANASTVG-VTIHNLPFLGVLVT 108

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127
           D  +   +    ++ ++       F  +      +     +   +   +S+ G  +W + 
Sbjct: 109 D-ELQGIDTTISKATVDRDDTTVTFRDVDIHANGIRHAREESQAVAETMSATGRIDWSEL 167

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187
                           + GG++   D  + +   ++ + +  +   ++I +   + +   
Sbjct: 168 S--------------RLAGGKVTYNDD-TGETGRVAIVTVLGARVDVSITAVPGVKTTSR 212

Query: 188 SVIAEG-TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
            V     + + D+                 + LK  L  +     +   GNL +   +  
Sbjct: 213 RVTLSSPSASLDDIPIP------------DVLLKPILDGITSRFTLPDLGNLHYESLKAT 260

Query: 247 YSG-VFSVAGDFSKLLNLEL 265
             G  FS+ G   KL +L  
Sbjct: 261 SQGLDFSLVGTGVKLSDLTG 280


>gi|222081854|ref|YP_002541219.1| alpha-galactosidase [Agrobacterium radiobacter K84]
 gi|221726533|gb|ACM29622.1| alpha-galactosidase [Agrobacterium radiobacter K84]
          Length = 696

 Score = 38.3 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/157 (8%), Positives = 35/157 (22%), Gaps = 27/157 (17%)

Query: 22  TVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS--- 78
               F+                 G+++ +     + +     V    + +D +E      
Sbjct: 509 GASRFVPPELLGAHIAASPNHQTGRRLTLSFRALVALAYHLGVELNPLALDAEEKQELEG 568

Query: 79  ---------FESKIEGLSMRAEFLP--LLSGEIRVFDM---YIDQPH--------LNFYL 116
                          G   R   L    + G      +       P         +   +
Sbjct: 569 WIALHKSLRPLLHAPGKQFRLPPLDGRYVWGAADESRIVAFVAQGPQMVGEQPAPVRLPV 628

Query: 117 SSKGVSNWFQRKSTMDMIHNVIL--EKIHVKGGRIKI 151
           S +G   W  +         + +   +  +  G +  
Sbjct: 629 SGEGAGKWRVKAIHPAEPEFIRISEGQQRLLNGELTF 665


>gi|187777281|ref|ZP_02993754.1| hypothetical protein CLOSPO_00833 [Clostridium sporogenes ATCC
           15579]
 gi|187774209|gb|EDU38011.1| hypothetical protein CLOSPO_00833 [Clostridium sporogenes ATCC
           15579]
          Length = 456

 Score = 38.3 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/221 (10%), Positives = 72/221 (32%), Gaps = 13/221 (5%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           +R+L  L     VV    F + + ++  D+R   + + +  + + I     I++++   P
Sbjct: 6   KRILYTLTVTLIVVFSSTFAILMTLERNDYRNYLQGEYSKNLHELITSVQNIRVNLSKAP 65

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            +  ++               E +   +         + +    I              +
Sbjct: 66  IIGSRE---------QEIVTFEEIFKYSSMANDKLHSLPIDQNTITNTSKFLSQVGDFSN 116

Query: 123 NWFQRKSTMDMIHNVILEKI-HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           +  +     + +     + I  +K   +++ +Q ++ V  +++  ++       +   L 
Sbjct: 117 SLAKSIVKNNNLSKDDYDNIERLKKESLQLENQLNNVVMDVNEGRVRWGDIRKKVSGVL- 175

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ 222
             + +     +G  N   K+        +       +L+I 
Sbjct: 176 --AKENPNSIKGQFNNIQKQVMQYPALIYDGPFSDNTLEIT 214


>gi|312898375|ref|ZP_07757765.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
 gi|310620294|gb|EFQ03864.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
          Length = 1430

 Score = 37.9 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 32/360 (8%), Positives = 91/360 (25%), Gaps = 69/360 (19%)

Query: 2   LRR--VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFER--------------------- 38
           ++R  +   +  +F VV   AF       W    +                         
Sbjct: 1   MKRHRLFTSVVIIFLVVFGVAFIWMRTALWPRLPQMITSLADEKINGTLTFSDMHISLTG 60

Query: 39  -------QATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAE 91
                    +   G+++     + + I PF +V    +             ++       
Sbjct: 61  KVVFTDVAVSDAQGRRVLDSEEVDVTINPFKAV-VSSLSSGHTAGAVDLVDVKT------ 113

Query: 92  FLPLLSGEIRVFDMYIDQPHLNFYLSS-KGVSNWFQRKSTMDMIHNVILE-KIHVKGGRI 149
                             P L+ + +      N  +          + L   I +  G  
Sbjct: 114 ------------------PVLHVWQNPTDKSWNVTKLFKKQSPDQPMALRSNILIHDGTF 155

Query: 150 KIIDQESDQVYFLSDLNLQIS-ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208
           ++      +   +  +N  +S A + ++    +       V          +    K+  
Sbjct: 156 RVA-PAQGKTAVVEKVNGSVSLADYPSVRGDATASVDGQDVSLSVH-YLSARDYDIKVKG 213

Query: 209 NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY-SGVFSVAGDFSKLLNLELSA 267
           +  + N          P+   + +   G   +         G+F+        L      
Sbjct: 214 SGLSAN----FAASYVPVDTGVSLTEGGVGEYFLHIRESHDGLFAEGQADLNHLGFVYGD 269

Query: 268 KKSR-LSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
            +   ++G  ++ D ++ ++    +    + +       K++     + +   +      
Sbjct: 270 YRVSDVTGQIRLFDTDLHLNDVHAKVN--DQAVAVSGLVKIN-GNVPVFDLKVDADRVDM 326


>gi|255536628|ref|YP_003096999.1| hypothetical protein FIC_02507 [Flavobacteriaceae bacterium
           3519-10]
 gi|255342824|gb|ACU08937.1| hypothetical protein FIC_02507 [Flavobacteriaceae bacterium
           3519-10]
          Length = 883

 Score = 37.9 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 47/380 (12%), Positives = 116/380 (30%), Gaps = 34/380 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           M ++ L  L   F  V+V    V  F      R +            +     +++ +  
Sbjct: 1   MKKKYLRPLSI-FVAVVVLITLVLNFGANFWLRNNLSGYIKKNSNYNVKYS-SLEVDMFT 58

Query: 61  FPSVFFKDIRIDQKEDGSF-----ESKIEGLSM-RAEFLPLL-SGEIRVFDMYIDQPHLN 113
              +    I +  K  G       E  I+ LS+ R     +L +  I   ++ + +P L 
Sbjct: 59  G-RISAAGISVRSKNSGDQNTIGLEGSIDTLSVSRLGIYDVLFNKTISSNNLLLVKPDLK 117

Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARF 173
             L+            T    + V+ + + +  G I ++     +   + DL L +    
Sbjct: 118 ITLAK------PVDDKTKKKRNPVLFKNLKISNGNITVLRHTKQKFLEVKDLELNVENIQ 171

Query: 174 LNIIS-PLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIII 232
           +   S    +  +  +   +G   +        + A         + ++ +   A   ++
Sbjct: 172 MTEESMERKLPLVFDTYDIKGKDFYFG---PDDVYAVTAQTITTEAGQMSIRNFAVKPLL 228

Query: 233 DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GNFKISDGNVRISRYKLQ 291
                  +    P    ++          ++ L   K  LS  +F+  D  +  +  K  
Sbjct: 229 SYQ---NFRRFHPNDKNLYDFKATEMNFKDVALDDDKVALSHAHFQNPDLKIMTTSAKAV 285

Query: 292 SILPNSSTDEDNKTKVSQDEE-----NLLNFSENGAESMHDLNETDFFEEEEK-----KN 341
               + +   + +  + ++ +            + A+   ++N+     E  K     + 
Sbjct: 286 RKKKDLNVTVNMEDVLFKNAKISILNPNGTPKLSAADVTLNINKFVMDSETSKSPLPFEY 345

Query: 342 KNDDLKKDDIQYSVNKKEEK 361
            N  +    I +    +   
Sbjct: 346 ANFSVAGKQINFVTETQNIN 365


>gi|300725273|ref|YP_003714602.1| hypothetical protein XNC1_4518 [Xenorhabdus nematophila ATCC 19061]
 gi|297631819|emb|CBJ92540.1| conserved hypothetical protein; putative exported protein
           [Xenorhabdus nematophila ATCC 19061]
          Length = 590

 Score = 37.9 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 49/331 (14%), Positives = 98/331 (29%), Gaps = 50/331 (15%)

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
           P+V+ KD+ I   +       ++ L+   + L LL+G                     G+
Sbjct: 248 PAVYVKDLNITNAKLQGKNWSVDYLNSTIKNLGLLNGSWDA---------------EDGL 292

Query: 122 SNWFQRKSTMDMIHNVI-LEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
            ++       +       L K H  G    I +  +     L ++  Q   +   +    
Sbjct: 293 VDFHAMDMAFNNAQFSDTLGKFHFSGETFTIANLTTHYQKGLFNIQSQWDRKSRQLTLKN 352

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
           S            TG F +  S +      PA      LK+    +   ++ID      +
Sbjct: 353 S----------SVTGLFYSLPSTWLDDLQNPAPGWISGLKLNDISINNALLIDTHPQFPF 402

Query: 241 ---------NEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS---GNFKISDGNVRISRY 288
                    +    + +G +      +       +  K  ++     F  +D  + I + 
Sbjct: 403 QLTTLSGYVDNLDILKNGKWGFWNGQASFQAAAGTFNKIEITRPYLQFHATDDTITIDK- 461

Query: 289 KLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFF-------EEEEKKN 341
            L +         +        +    N +  G  +  ++     +       E      
Sbjct: 462 -LNAFTNEGLLQINGTAAQRTSQTP-FNLNFKGMNADLNILPQWGWVPLNIQGEGNFSLA 519

Query: 342 KNDDLKKDDIQYSVNKK--EEKDNSHDKENQ 370
              DL   DI+ ++N     E   S DKE+Q
Sbjct: 520 ITGDLSAHDIKGTINGTLVAEGSKSSDKESQ 550


>gi|311747823|ref|ZP_07721608.1| hypothetical protein ALPR1_15884 [Algoriphagus sp. PR1]
 gi|126575814|gb|EAZ80124.1| hypothetical protein ALPR1_15884 [Algoriphagus sp. PR1]
          Length = 533

 Score = 37.9 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 32/307 (10%), Positives = 87/307 (28%), Gaps = 36/307 (11%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGK--KIAVKGGIKIHIL 59
           +++       L  ++L+       F                   +   +     I I + 
Sbjct: 1   MKKF-----GLIVLILLITGVAGTFFLENWLTHRIPETVNSNPDRDYDLVFD-DIDIQLF 54

Query: 60  PFPSVFFKDIRIDQKEDGSFESKIE------GLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113
               V  +DI +    + S  SK+        +S    +  +   ++ + ++ I +P   
Sbjct: 55  -KRRVVIRDI-LMNPMNDSLSSKVNGSLRSIRMSGVNLWKLIFEDKLEIDELKIIEPAFR 112

Query: 114 FYLSSKGVSNWFQRKSTMDMIHNV----ILEKIHVKGGRIKIIDQESD--QVYFLSDLNL 167
                KG       ++   +  ++     ++   ++ G  ++  +     +    +DLN+
Sbjct: 113 LIQREKGSHGQNSSQAFQLIFQDIISRGEIKHFVLEKGTAEMFVESDSLFRFGHFTDLNI 172

Query: 168 QISARFLNIISPLSIDSIKGSVIA-EGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPL 226
               +   + S   I              +  N +        F  ++      +    L
Sbjct: 173 ----KADGLESDSIIIKQAVPFKLASLEASIKNVQIQIDSEQEFNVESIDYK-SLNNEIL 227

Query: 227 AYPIIIDLFGNLFWNEKQPIYS---GVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
              I +     +    +   Y        +       ++ E S       G++ +  G +
Sbjct: 228 FEGISLKFKEGIDAAVQNAAYQQDLIELDIQTVKLGHIDTESSIY-----GDWSVKAGLL 282

Query: 284 RISRYKL 290
            +    L
Sbjct: 283 TVDSLVL 289


>gi|307323959|ref|ZP_07603168.1| conserved hypothetical protein [Streptomyces violaceusniger Tu
           4113]
 gi|306890408|gb|EFN21385.1| conserved hypothetical protein [Streptomyces violaceusniger Tu
           4113]
          Length = 278

 Score = 37.9 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/141 (9%), Positives = 39/141 (27%), Gaps = 6/141 (4%)

Query: 43  IVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRV 102
            V ++   +G +   + P+P V  + + + + +  +                 +    R+
Sbjct: 140 AVERETRRRGKLLDSLWPYPQVDTEPVVLRRPDGRAPAVTSRQ-RAVLALADGVRTPARI 198

Query: 103 FDMYIDQPH----LNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQ 158
               + +P     ++    +        R +         L                +  
Sbjct: 199 AR-ELGRPAFHTLIDIRRLAAAGHVATPRPARPGRPGGPDLPARSGASAPPAADRGPAAA 257

Query: 159 VYFLSDLNLQISARFLNIISP 179
           V+   D++L    R     +P
Sbjct: 258 VFTDPDIDLLRRLRDALEATP 278


>gi|310765309|gb|ADP10259.1| conserved uncharacterized protein YtfN [Erwinia sp. Ejp617]
          Length = 1257

 Score = 37.9 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 40/324 (12%), Positives = 91/324 (28%), Gaps = 22/324 (6%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL     +F    +     I+G+++ + G   I +             ++ + + 
Sbjct: 214 ALFAKPLLPILPEFVLPLDVNVQQILGEQLRITGDSDITVNRLLLKAKTERNQLWLQSLD 273

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
           +D  +          LS        L+  I V  +  ++  +      +  +      S 
Sbjct: 274 VDSPQGQLNAQGQATLSGSWPLNFTLNSAINVEPLKGEKIKMTLDGGLRDTTKLALNLSG 333

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                     ++ V G  + +  Q     + L       +A+F       SI+      +
Sbjct: 334 PVRAQLDADSQLAVAGLPLNMRLQSPQLRWPLDG-----AAQFQASNVNFSINGKATDYV 388

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    +      T     K       +  L   A     DL   + W++    +  
Sbjct: 389 MSLKAALQGEGMP-PATLTLDGKGNVEQFSLDKLRLAALQGNTDLTALVDWSK-AISWRS 446

Query: 250 VFSVAGDFSKLLNLELSAKK---SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT- 305
             +++G  +     +  AK        G+       +R+   KL+  + N++   D    
Sbjct: 447 KLTLSGINTAKQYPDWPAKLEGVITTRGSLYGGSWQMRVPELKLKGNVRNNAVSADGSLS 506

Query: 306 --KVSQDEENLLNFSENGAESMHD 327
               +Q +   +            
Sbjct: 507 GNSYNQWDIPGIKLVLGRNNLNLK 530


>gi|308188243|ref|YP_003932374.1| hypothetical protein Pvag_2766 [Pantoea vagans C9-1]
 gi|308058753|gb|ADO10925.1| Uncharacterized protein ytfN [Pantoea vagans C9-1]
          Length = 1255

 Score = 37.9 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 94/305 (30%), Gaps = 29/305 (9%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS 78
             F  PL     DFR   + +   I+G+++ + G           +    + +  K    
Sbjct: 213 AMFAQPLLPALPDFRLPLDIEVQQILGEQLRITGDTD--------ISVSRLLLKAKTADR 264

Query: 79  FESKIEGLSMRAEFLPL-LSGEIRVFDMYIDQPHLNFYLSSK---GVSNWFQRKSTMDMI 134
              ++  L + +    L  SG+  + D +     LN  +++    G     +    M   
Sbjct: 265 HM-QLTTLEVDSNLGNLNGSGQATLADNWPVDFTLNGTVNTDPIKGEKLALKLNGAMRDE 323

Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
             + L        ++   D  +        L+LQ+++  L       +      +  +  
Sbjct: 324 LKLGLNLSGPVKAQL---DATTQLAVAGLPLSLQLTSPQLRWPLTGPVQYQADDLNYQFK 380

Query: 195 GNFDNKRSAFKI-----TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW-----NEKQ 244
           G   +   + +      +      +      ++ F L    +  L GN+         K 
Sbjct: 381 GKATDYVMSLQTAVKGESVPPATVSLTGKGNVEQFSLDRLRVAALQGNIDLTALVDWSKA 440

Query: 245 PIYSGVFSVAGDFSKLLNLELSA---KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
             +    ++AG  +     +  A    K    G+       + + + +L+  +  ++   
Sbjct: 441 ISWRSELTLAGINTAKQYPDWPARLDGKITTRGSLYGGSWQLSVPQLQLKGNVKQNAVTA 500

Query: 302 DNKTK 306
           D    
Sbjct: 501 DGSLT 505


>gi|294055575|ref|YP_003549233.1| hypothetical protein Caka_2045 [Coraliomargarita akajimensis DSM
            45221]
 gi|293614908|gb|ADE55063.1| hypothetical protein Caka_2045 [Coraliomargarita akajimensis DSM
            45221]
          Length = 16477

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 31/309 (10%), Positives = 79/309 (25%), Gaps = 10/309 (3%)

Query: 48   IAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
            + +KG I++ I    +   + I I   ED           +     P +  E+    + +
Sbjct: 2362 VVIKGTIRVRISTLNTAVDETISIPGTEDEVPVV-FSAFEVADATGPFI--EVYGLGLTV 2418

Query: 108  DQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILE-KIHVKGGRIKIIDQESDQVYFLS--- 163
            +    +                T     +   +  + ++   + + D  +D V       
Sbjct: 2419 EAAGQHISTDLSIQQVLTDVNGTPGDSSDDRKDLLLTLRNASLSLGDSSTDYVTLTDGFG 2478

Query: 164  DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL 223
            ++ +  +     I   +  D          +   +    A   T          + +   
Sbjct: 2479 EILISDAGIAGAIGGTIRTDIPGVQFSGRFSVVLNTTAQAVDRTFTTAVDTDGNATETIS 2538

Query: 224  FPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNV 283
              +A P +  +  ++         S                     + LS          
Sbjct: 2539 GIVAGPYVRLIGESVSLEIAGQSMSADIYFEQMTLPTGEGIFVLGINNLSIGL-GDGTTD 2597

Query: 284  RISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKN-- 341
             ++  + + +L  +S     +          L+F+         +N       E  +   
Sbjct: 2598 YLTITEGKGLLIVTSAGVAGELSARVALAPSLDFTLAVDRLTLAINTQGVAVNESLELGG 2657

Query: 342  KNDDLKKDD 350
            +  DL    
Sbjct: 2658 ELIDLSLPA 2666


>gi|294625362|ref|ZP_06703997.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292600342|gb|EFF44444.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 813

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 31/327 (9%), Positives = 83/327 (25%), Gaps = 39/327 (11%)

Query: 31  DFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE----------DGSFE 80
            F      Q   +  +++ ++G  ++ +  F  +    + I                   
Sbjct: 223 QFDRIVAEQVQAVSLRQLHIEGQGQLQLGLFKQLRGGPMEIFPSRAVFESARVRWGQDEM 282

Query: 81  SKIEGLSMRAEFL----------PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
            +   L + A              +L     +  ++ D   L+    ++G      R   
Sbjct: 283 MRNGQLRIEASIARHAPDQASGHAVLQLTDALIAVHGDTAALDVARHAQGRHTLATRPGK 342

Query: 131 MDMIHNVILEKIHVKGGR-IKII----DQESDQVYFLSDLNLQISARFLNIISPLSIDSI 185
                 +   +  ++ G  +       D        L  L  Q+       ++    +  
Sbjct: 343 GRADGELRWIRGALQPGSQLHWRSPLHDSTRASAALLGALTAQLQVDQNMRLTVSMPEPA 402

Query: 186 KGSVIAEGTGNFDNKRSAF-KITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQ 244
              +  +       ++     + +  P  +    L  QL  L++                
Sbjct: 403 DAGLTLDADVRVQGRQLPVQSMRSLLPRTSGHARLHWQLSSLSW-----------IAALF 451

Query: 245 PIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNK 304
           P      ++ G+     +L +   +       ++     ++      +I   +S D   +
Sbjct: 452 PDVD-WLTLEGEGLVDADLRIDRGQLGAGSRLQVPHVQAQVGVM-GHAIAGQASADLRVE 509

Query: 305 TKVSQDEENLLNFSENGAESMHDLNET 331
              +      L          H    T
Sbjct: 510 ADANGQLLPALALQMQQFSIAHSDAPT 536


>gi|85000927|ref|XP_955182.1| hypothetical protein [Theileria annulata strain Ankara]
 gi|65303328|emb|CAI75706.1| hypothetical protein, conserved [Theileria annulata]
          Length = 676

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 21/278 (7%), Positives = 64/278 (23%), Gaps = 31/278 (11%)

Query: 33  REDFER--QATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKI-EGLSMR 89
           + + E   Q + I G  + +KG                + +  + D      +       
Sbjct: 126 KLEIEAKGQISTITGSDVTIKGD---------------VTVTNQGDLRNALTLTHNDHSS 170

Query: 90  AEFLPLLSGEIRVFDMYIDQPHLNFYLSS-KGVSNWFQRKSTMDMIHNVILEKIHVKGGR 148
                 ++ +     + I+   +N   ++   + +  +   T+          I V    
Sbjct: 171 TGLSGTITPKDTDSKVTINGSSINLTGTALDALKSLTKNAVTLTNGSFRSSASITVTSSD 230

Query: 149 IKIIDQESDQV-YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207
           +             ++ ++  I     + +   +  ++   +  +  G            
Sbjct: 231 VDFKTLNVGSSGLQITKISGTIKNADGSELQRSTPLTVGDKLTLDANGTITQ---PQTAK 287

Query: 208 ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSA 267
                 N  I +      +   +      N                        +L++  
Sbjct: 288 NTPVKLNGTIVVTSNDQEIGSTLTFGGDPNRSGVTGSLNLDNDRGRKYVKITGTDLKID- 346

Query: 268 KKSRLSGNFKISDGNVRISRYKLQSILPN--SSTDEDN 303
                SG ++   G    +         +         
Sbjct: 347 -----SGAYQAIQGAADTTSSSFTIGAADPRDPGSITG 379


>gi|310768276|gb|ADP13226.1| two-component system sensor kinase [Erwinia sp. Ejp617]
          Length = 453

 Score = 37.9 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 10/104 (9%)

Query: 12  LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71
           LF V  +      LF+ W   R    RQ      +    KG + + + P   +   ++  
Sbjct: 157 LFIVGGICGLLFSLFLAWNLTRPM--RQLRAGFAR--VAKGDLSVRLFPQMRLRHDELSA 212

Query: 72  DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
             ++     + +E L +       L  ++      +  P     
Sbjct: 213 VARDFD---AMVERLLVLVSAREELLHDVSHE---LRSPLARLQ 250


>gi|298346923|ref|YP_003719610.1| non-specific serine/threonine protein kinase [Mobiluncus curtisii
           ATCC 43063]
 gi|298236984|gb|ADI68116.1| non-specific serine/threonine protein kinase [Mobiluncus curtisii
           ATCC 43063]
          Length = 663

 Score = 37.9 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 77/269 (28%), Gaps = 37/269 (13%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFRED---FERQATLI----VGKKIAVKGGIK 55
           R  LIG      V+L    T         +R       +Q +          +  +   +
Sbjct: 373 RWFLIGGIIGAIVLLAAILTWFFMWGPGSYRPMVDVVNQQWSDASKSLTAADVTFE---R 429

Query: 56  IHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAE------FLPLLSGEIRVFDMYIDQ 109
           + +    +V   ++       G    + +   +          +P L+G+ +   + + +
Sbjct: 430 VDVFDD-NVPAGNVARTDPAPGKPLGRFQTAKIFVSKGVEMLTMPDLTGKTQEDALELVK 488

Query: 110 ------PHLNFYLS---SKGVSNWFQRKSTMDMIHNVILEKIHVKGGR--IKIID----Q 154
                 P ++        +G  +  Q  +    + +  + K+ V  GR  + ++D     
Sbjct: 489 KARFNAPQISEEFHDTVPEGQVS-AQDPAPNASVPHNTIVKVTVSKGRQPVTMLDLVGKP 547

Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG-NFDNKRSAFKIT---ANF 210
            S+    L+ + LQ   +            I  SV    T    D            A  
Sbjct: 548 GSEAQSELTKVGLQPQVKEEFSDGVPKGKVISQSVAPNTTLHRLDQVTLVVSKGPEMAAV 607

Query: 211 PAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
           P        + +    +    +++     
Sbjct: 608 PNVFGKSEGEARSALESAGFTVNVKRTFG 636


>gi|283477010|emb|CAY72902.1| Uncharacterized protein ytfN [Erwinia pyrifoliae DSM 12163]
          Length = 1222

 Score = 37.6 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 40/324 (12%), Positives = 90/324 (27%), Gaps = 22/324 (6%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL     +F    +     I+G+++ + G   I +             ++ + + 
Sbjct: 179 ALFAKPLLPILPEFVLPLDVNVQQILGEQLRITGDSDITVNRLLLKAKTERNQLWLQSLD 238

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
           +D  +          LS        L+  I V  +  ++  +      +  +      S 
Sbjct: 239 VDSPQGQLNAQGQATLSGSWPLNFTLNSAINVEPLKGEKIKMTLDGDLRDTTKLALNLSG 298

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                     ++ V G  + +  Q     + L       +A+F       SI+      +
Sbjct: 299 PVRAQLDADSQLAVAGLPLNMRLQSPQLRWPLDG-----AAQFQASNVNFSINGKATDYV 353

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    +      T     K       +  L   A     DL   + W++    +  
Sbjct: 354 MSLKAALQGEGMP-PATLTLDGKGNVEQFSLDKLRLAALQGNTDLTALVDWSK-AISWRS 411

Query: 250 VFSVAGDFSKLLNLELSAKK---SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT- 305
             +++G  +        AK        G+       +R+   KL+  + N++   D    
Sbjct: 412 KLTLSGINTAKHYPAWPAKLEGVITTRGSLYGGSWQMRVPELKLKGNVRNNAVSADGSLS 471

Query: 306 --KVSQDEENLLNFSENGAESMHD 327
               +Q +   +            
Sbjct: 472 GNSYNQWDIPGIKLVLGRNNLNLK 495


>gi|320103922|ref|YP_004179513.1| hypothetical protein Isop_2388 [Isosphaera pallida ATCC 43644]
 gi|319751204|gb|ADV62964.1| hypothetical protein Isop_2388 [Isosphaera pallida ATCC 43644]
          Length = 1180

 Score = 37.6 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 91/294 (30%), Gaps = 27/294 (9%)

Query: 28  DWTDFREDFERQATLIVGKKIAVKGGIKI---HILPFPSVFFKDIRIDQKEDGSFESKIE 84
            W   R +       ++ + IA  G +++                R+   E     +  E
Sbjct: 39  PWLAGRPEMLAVLNTMLNEAIA-PGRLELDAAQFSWNHRQRLGPGRLLDGEG-RMLASFE 96

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSN--------WFQRKSTMDMIHN 136
            L++    + L++    + D+ ++  +L    ++ G  N         +      +  + 
Sbjct: 97  SLTLNRGLVALIANPADLGDLVVEGLNLVVERTADGHVNLVDALNESPWATSKKDEPSNG 156

Query: 137 VILEKI--------HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGS 188
             LE           + GGR+K++  E      +  L+ ++          L +  +   
Sbjct: 157 FQLEPFDPGLNLTLKLVGGRLKLVTPELVAPLVVDRLDAKLVLATAPAPITLEL-GLAQQ 215

Query: 189 VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYS 248
             A          +      N  A  K   L   +    +P+ + + G     + Q    
Sbjct: 216 EGATLAVQALLATATTSDDTNTNADAKEPLLSAVIQATNWPLTVRVEG----LDTQAHLD 271

Query: 249 GVFSVAGDFSKLLNLELSAKKSRLSGNFK-ISDGNVRISRYKLQSILPNSSTDE 301
           G   +    + L +L      ++L      +    + + R +L + L +  T  
Sbjct: 272 GRIELRALSANLWSLAAQTTLTQLVAEGTALQGDRLALDRVELDADLLSKETGL 325


>gi|259907810|ref|YP_002648166.1| two-component system sensor kinase [Erwinia pyrifoliae Ep1/96]
 gi|224963432|emb|CAX54920.1| two-component system sensor kinase [Erwinia pyrifoliae Ep1/96]
 gi|283477680|emb|CAY73596.1| putative two-component system sensor kinase [Erwinia pyrifoliae DSM
           12163]
          Length = 453

 Score = 37.6 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 10/104 (9%)

Query: 12  LFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRI 71
           LF V  +      LF+ W   R    RQ      +    KG + + + P   +   ++  
Sbjct: 157 LFIVGGICGLLFSLFLAWNLTRPM--RQLRAGFAR--VAKGDLSVRLFPQMRLRHDELSA 212

Query: 72  DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
             ++     + +E L +       L  ++      +  P     
Sbjct: 213 VARDFD---AMVERLLVLVSAREELLHDVSHE---LRSPLARLQ 250


>gi|298290835|ref|YP_003692774.1| hypothetical protein Snov_0830 [Starkeya novella DSM 506]
 gi|296927346|gb|ADH88155.1| protein of unknown function DUF490 [Starkeya novella DSM 506]
          Length = 1422

 Score = 37.6 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 51/360 (14%), Positives = 107/360 (29%), Gaps = 47/360 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIV---GKKIAVKGGIKIHI 58
           ++R L  + F   +++         +  T  +    R A+ +    G ++ ++  I    
Sbjct: 1   MKRALRSVLFALLLLVALVAAAFGVLQTTPGKALLARTASSLASSGGMQVDIR-DIS-GF 58

Query: 59  LPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
           +PF  +    I +   +     ++I+G  +    L LLSG + V  +   +  L      
Sbjct: 59  VPF-DMGVGAIELADAKG--PFARIDGARLDWRPLALLSGRLDVTTLAAQRVELQ-RRPE 114

Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS---DLNLQISARFLN 175
              S              V +E + +    I + +        LS     +L   A+ L+
Sbjct: 115 LPPSEPSTSSGGSSFALPVRVETLTIPD--IVLDEPVLGHAAQLSLTGSADLASLAQGLS 172

Query: 176 IISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK-------------------NKA 216
           +   L      GSV        + +R    I A  PA                      +
Sbjct: 173 LTFALERRDEPGSVSGSAAYAPEGERLDLDIAAREPAGGLIARAAGMEGLPALEATLKGS 232

Query: 217 ISLKIQLFPLAYP----IIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNL-ELSAKKSR 271
             L      LA        +     +    +    +             +L  L   ++ 
Sbjct: 233 GPLDAWNGQLALSAGDVAAVSGAAGIRATPQGRRLTFGLDADIARLLPADLAPLFEGRTE 292

Query: 272 LSGNFKISDGN-VRISRYKLQS--------ILPNSSTDEDNKTKVSQDEENLLNFSENGA 322
           L+G   +S+   + I  +  ++           +++   D    V+  +         GA
Sbjct: 293 LAGAATLSNERDIAIENFTARAAGFNASAGGTLDAANTADLTFDVTLGDAARFAALARGA 352


>gi|254302564|ref|ZP_04969922.1| hypothetical protein FNP_0189 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148322756|gb|EDK88006.1| hypothetical protein FNP_0189 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 495

 Score = 37.6 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 8/109 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++  IG+  LF V+LV              +E  ER+ +      + + G + +     
Sbjct: 1   MKK-FIGILLLFIVILVTVLYFARDF---LLKEYLERKMSKANNAPVTI-GSVDLDYF-E 54

Query: 62  PSVFFKDIRI-DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
             V  KDI++     +      I+ L    E        I   D  I+ 
Sbjct: 55  SYVTLKDIKVMSNLHEDEIFISIDELKSYYEI-DFRKKIITFDDTEING 102


>gi|73921731|sp|O68900|PET_ECO44 RecName: Full=Serine protease pet autotransporter; Contains:
           RecName: Full=Serine protease pet; AltName:
           Full=Plasmid-encoded toxin pet; Contains: RecName:
           Full=Serine protease pet translocator; Flags: Precursor
 gi|3095184|gb|AAC26634.1| Pet precursor [Escherichia coli]
 gi|284924610|emb|CBG27789.1| serine protease (plasmid-encoded toxin Pet) [Escherichia coli]
          Length = 1295

 Score = 37.6 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 28/266 (10%), Positives = 74/266 (27%), Gaps = 20/266 (7%)

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF-------------YLS 117
           + Q +  + + + + L++    L +        ++      +N               ++
Sbjct: 623 LSQPDWETRKFRFDNLNIEDSSLSIARNADVEGNIQAKNSVINIGDKTAYIDLYSGKNIT 682

Query: 118 SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNII 177
             G +     KS   +  +     I    G I I D+    +  +S L+           
Sbjct: 683 GAGFTFRQDIKSGDSIGESKFTGGIMATDGSISIGDKAIVTLNTVSSLDRTALTIHKGAN 742

Query: 178 SPLSID-SIKGSVIAEGTGNFDNK-RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
              S       ++ + G         S  +IT +         L              + 
Sbjct: 743 VTASSSLFTTSNIKSGGDLTLTGATESTGEITPSMFYAAGGYELTEDGANFTAKNQASVT 802

Query: 236 GNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---RLSGNFKISDGNVRISR--YKL 290
           G++   +   +  G        ++     L+          G+ K +  ++ ++   +K+
Sbjct: 803 GDIKSEKAAKLSFGSADKDNSATRYSQFALAMLDGFDTSYQGSIKAAQSSLAMNNALWKV 862

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLN 316
                    +      +    +N+ N
Sbjct: 863 TGNSELKKLNSTGSMVLFNGGKNIFN 888


>gi|144897790|emb|CAM74654.1| conserved hypothetical protein, secreted [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 244

 Score = 37.6 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 62/185 (33%), Gaps = 22/185 (11%)

Query: 18  VGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDG 77
            G   +   +D +  ++  E   T + G K++V G +KI +          + +      
Sbjct: 18  AGVAFLSSNLD-SIVKKVIETAGTEVAGVKVSV-GDVKISL-SEGKATIAGLTVANPPGF 74

Query: 78  --SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST----- 130
                 K+  +++  +   L +  I + D+ +  P + + + + G SN    +       
Sbjct: 75  SAPHAFKLGAIAVALDTGSLTANPIVIKDISVAAPEVTYEMGAGGGSNIDAIQKNVAAKT 134

Query: 131 ----------MDMIHNVILEKIHVKGGRIKIIDQESD--QVYFLSDLNLQISARFLNIIS 178
                           +I++++ +  G + +            L+D+ L    R     S
Sbjct: 135 AGSGDKATAEKGEEKKLIIDRLVISKGTVNLATAIPGVKSSATLADIVLTGIGRKSGGAS 194

Query: 179 PLSID 183
              + 
Sbjct: 195 AGEVA 199


>gi|259907200|ref|YP_002647556.1| hypothetical protein YtfN [Erwinia pyrifoliae Ep1/96]
 gi|224962822|emb|CAX54281.1| conserved uncharacterized protein YtfN [Erwinia pyrifoliae Ep1/96]
          Length = 1257

 Score = 37.6 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 40/324 (12%), Positives = 90/324 (27%), Gaps = 22/324 (6%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL     +F    +     I+G+++ + G   I +             ++ + + 
Sbjct: 214 ALFAKPLLPILPEFVLPLDVNVQQILGEQLRITGDSDITVNRLLLKAKTERNQLWLQSLD 273

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKST 130
           +D  +          LS        L+  I V  +  ++  +      +  +      S 
Sbjct: 274 VDSPQGQLNAQGQATLSGSWPLNFTLNSAINVEPLKGEKIKMTLDGDLRDTTKLALNLSG 333

Query: 131 MDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
                     ++ V G  + +  Q     + L       +A+F       SI+      +
Sbjct: 334 PVRAQLDADSQLAVAGLPLNMRLQSPQLRWPLDG-----AAQFQASNVNFSINGKATDYV 388

Query: 191 AEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-LFPLAYPIIIDLFGNLFWNEKQPIYSG 249
                    +      T     K       +  L   A     DL   + W++    +  
Sbjct: 389 MSLKAALQGEGMP-PATLTLDGKGNVEQFSLDKLRLAALQGNTDLTALVDWSK-AISWRS 446

Query: 250 VFSVAGDFSKLLNLELSAKK---SRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKT- 305
             +++G  +        AK        G+       +R+   KL+  + N++   D    
Sbjct: 447 KLTLSGINTAKHYPAWPAKLEGVITTRGSLYGGSWQMRVPELKLKGNVRNNAVSADGSLS 506

Query: 306 --KVSQDEENLLNFSENGAESMHD 327
               +Q +   +            
Sbjct: 507 GNSYNQWDIPGIKLVLGRNNLNLK 530


>gi|301155256|emb|CBW14721.1| conserved protein [Haemophilus parainfluenzae T3T1]
          Length = 1297

 Score = 37.6 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 96/310 (30%), Gaps = 27/310 (8%)

Query: 75   EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134
               + E   E   +  + +  L G+  +      +  + ++       N     + + + 
Sbjct: 750  AGKNGEVPFELKRINLDLVNKLMGQDTLKGQLQSRGKVAWFTDKPLQLNVAVEGNNIGVA 809

Query: 135  HNVILEKIHVKGGRIKI-IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG 193
              +      +   ++ +  D +++ +   SD+N+Q       I + L I+ +       G
Sbjct: 810  QKLDYRTFKLDIPKLSVNADIQNNNLTLKSDINVQNQG---RIGTDLKINDLSKGRQLGG 866

Query: 194  TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSV 253
            T   +  R +         ++    +            +   GNL    ++P+ +G F +
Sbjct: 867  TFAIEGLRLSLANQLFSSGESIDGEVV---------SRLSFGGNL----EKPLLNGNFDI 913

Query: 254  AGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEEN 313
                +KL +L       +++  F  +   +           P+S  + + +   +    +
Sbjct: 914  RNVKTKLKSLPFDVTDGQVAIRFNGTSSTL-----NGHVQTPDSKLNINGQA--NWANID 966

Query: 314  LLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKK---EEKDNSHDKENQ 370
                          ++     + +   N         +  S N              +N 
Sbjct: 967  NWTAEVRAQADNFKVDIPSMAKLKVSPNVVVKASPKLLDLSGNVDIPWARIAIESLPDNA 1026

Query: 371  ENFSGDKMIL 380
            E  S D++IL
Sbjct: 1027 EPVSEDEVIL 1036


>gi|253687389|ref|YP_003016579.1| hypothetical protein PC1_0994 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753967|gb|ACT12043.1| hypothetical protein PC1_0994 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 4874

 Score = 37.6 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 32/342 (9%), Positives = 91/342 (26%), Gaps = 28/342 (8%)

Query: 34  EDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFL 93
                    I G  + V   + +HI   PS+          +     ++     +     
Sbjct: 557 HTLTASVQGISGNTVTVDHTLDVHINTLPSITLTP---PFTDGILNAAEAAQDQV-IRGE 612

Query: 94  PLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIID 153
             ++G  +   + I   ++   +   G       K  +  + +  +  + +      + D
Sbjct: 613 TGINGRGQTVSLTIGGNYVTGTVDVNGNWTVTIPKDILQSLPSDNVSVLEI-----VVRD 667

Query: 154 QESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAK 213
              ++     ++++  +   LN+ +    D + G          +       ++      
Sbjct: 668 IAGNETTVTQNISVDTTPPTLNVSAIAQDDVLNG-----AELAVNQV-----VSGTASLS 717

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS 273
                + + L    Y   +   GN              +       +   + +   + ++
Sbjct: 718 EAGRVVTVALNDKTYTTTVGSDGNWSITLPTADL-VAIADGNHNLTVTLTDTAGNTTTVT 776

Query: 274 GNFKISDGNVRISRYKLQSILPNSSTD-EDNKTKVSQDEE-------NLLNFSENGAESM 325
               I  G        + ++  ++  D  + K  +             ++  S NG   +
Sbjct: 777 RPLTIDSGATTAPTITINNVADDNVIDGAEAKVSLQLSGTTTNVEAGQVVTISLNGKTYL 836

Query: 326 HDLNETDFFEEEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK 367
             +     +           L       SVN   +  N+   
Sbjct: 837 ATVQSGGVWSVNVSTADIALLADGAHSISVNVSNKAGNAASG 878


>gi|222109537|ref|YP_002551801.1| hydrophobe/amphiphile efflux-1 (HAE1) family transporter
           [Acidovorax ebreus TPSY]
 gi|221728981|gb|ACM31801.1| transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
           [Acidovorax ebreus TPSY]
          Length = 1048

 Score = 37.6 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 38/353 (10%), Positives = 88/353 (24%), Gaps = 45/353 (12%)

Query: 3   RRVLIGLGFLFSVVLVGA-----------FTVPLFID-------------WTDFREDFER 38
           R +   +  +F +V+                 P  I                +     ER
Sbjct: 8   RPIFAWVIAIFIMVIGAVSITQLPVAQYPTVAPPTIQVTVAYPGATAQTLEDNVLSVIER 67

Query: 39  QATLIVGK-------KIAVKGGIKIHILPFPSVFFKDIRIDQK-EDGSFESKIEGLSMRA 90
           +     G        +    G I +   P  +     + +  +    +            
Sbjct: 68  EMNGATGLAYMETTSQANGTGTIVLSFEPGTNDDLAQVDVQNRLSRATPRLPAAVTQQGV 127

Query: 91  EFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIK 150
                 S  +    +  D P +N    +   +     +          + +   +     
Sbjct: 128 RVEKSRSNFLLFSILTSDNPDINIDALNDYAARNVVPELQRLPGVG-GVTQFGSERAMRI 186

Query: 151 IIDQE--SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITA 208
            ID          L  +N  I A+ + + +    +    +      G   +     K   
Sbjct: 187 WIDPAKLKGFNLSLDQVNASIRAQNVQVSAGNLGELPSPA------GQTISATIVVKGQL 240

Query: 209 NFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAK 268
           + P +   + L+           + L            Y+    + G  S  + ++L++ 
Sbjct: 241 STPEEFGNVILRANTDGST----VRLKDVARIELGAQTYNFSGRLNGSPSVGMGVQLTSS 296

Query: 269 KSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENG 321
            + L+    +      + RY  Q +      D      VS ++         G
Sbjct: 297 ANALATADAVKSKLAELQRYFPQGVAYTIPYDTSTFISVSIEKVVYTLLEAIG 349


>gi|238761739|ref|ZP_04622713.1| hypothetical protein ykris0001_12640 [Yersinia kristensenii ATCC
           33638]
 gi|238699853|gb|EEP92596.1| hypothetical protein ykris0001_12640 [Yersinia kristensenii ATCC
           33638]
          Length = 1281

 Score = 37.6 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 41/344 (11%), Positives = 105/344 (30%), Gaps = 47/344 (13%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIRI 71
            F  PL  +  DFR   + Q   I G+++ + G   + I             +    + I
Sbjct: 239 LFAQPLLPELPDFRLPLDLQIKAISGQQLRLTGDTDVLITSVLLQASTQANRIILNTLDI 298

Query: 72  DQKED----GSFESKIEGLSMRAEFLPLLSGEIRVFD---MYIDQP---HLNFYLSSKGV 121
              +         +  +   +       L+ E    +   + +       L   L+  G 
Sbjct: 299 KSPQGTLSAQGEATLADKWPLSMTVNSGLNIEPLKGERVKLTVGGALREQLKVALNLSGP 358

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +      T      + +  + ++  +++      +  + L +L ++++ +  +    + 
Sbjct: 359 VSAQLEAETALAQAGLPMA-LTLQSKQLRWP-LSGEPQFQLDNLRMRLNGQATDYALSIR 416

Query: 182 IDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQL-FPLAYPIIIDLF 235
            D             +G GN +      ++       N  ++  +     +++  ++ L 
Sbjct: 417 SDFKGTDLPPAIFTLDGKGNVEQFNLT-RLRLAALQGNTDLTGVVDWSKAISWNSVLTLS 475

Query: 236 G---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281
           G      W E      G     G             L L+ + K++R++    ++    G
Sbjct: 476 GINTAKQWPEWPAKLDGKIVTRGSLHGGSWQLQVPELTLDGNVKQNRVTARGSLTGNAAG 535

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM 325
              I    L      +  D         ++  LL+ + +  +  
Sbjct: 536 QWHIPGINLALGR--NKLDVKG----DLNDNWLLDANVDAPQLD 573


>gi|256846325|ref|ZP_05551782.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
 gi|256718094|gb|EEU31650.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
          Length = 495

 Score = 37.2 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 8/109 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++  IG+  LF VV+V              +E  ER+ +      + + G + +     
Sbjct: 1   MKK-FIGILLLFIVVIVTVLYFARDF---LLKEYLERKMSKANNAPVTI-GSVDLDYF-E 54

Query: 62  PSVFFKDIRI-DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
             V  KDI++            I+ L    E        I   D  I  
Sbjct: 55  SYVTLKDIKVMSNLHKDEIFISIDELKSYYEI-DFSKKVITFDDTEISG 102


>gi|89052735|ref|YP_508186.1| hypothetical protein Jann_0244 [Jannaschia sp. CCS1]
 gi|88862284|gb|ABD53161.1| protein of unknown function DUF490 [Jannaschia sp. CCS1]
          Length = 1206

 Score = 37.2 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 76/249 (30%), Gaps = 21/249 (8%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           + R L+ L      +   A       D T      E Q +    +++++ G         
Sbjct: 1   MIRFLLILALSLCPIAAAA-----QDDGTTLSRLLEDQLSDGDDRQVSITG---FRGALS 52

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
                + + I   +       +E   +      LL GE+RV ++   +  +         
Sbjct: 53  SEATLERMTISDADG--VWLVLEDAVLDWTRSALLRGELRVDELTAARLEVIRPPLPVEG 110

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
            +    ++    + ++    + V+ GRI + +    +               L++   + 
Sbjct: 111 VDLADTEAQPFSLPDLP---VRVEIGRIAVEEVVLGEPI-------IGLPASLSVEGSVR 160

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
           +    G  +       D     F + A +    + + L + L      +  +L G     
Sbjct: 161 LAGGAGEALITLD-RLDGPAGQFVLDATYDNATRNLDLSLLLEEADGGLAAELLGLPGRP 219

Query: 242 EKQPIYSGV 250
           + +   +G 
Sbjct: 220 DVRLAVAGS 228


>gi|325917261|ref|ZP_08179484.1| filamentous hemagglutinin family N-terminal domain [Xanthomonas
            vesicatoria ATCC 35937]
 gi|325536522|gb|EGD08295.1| filamentous hemagglutinin family N-terminal domain [Xanthomonas
            vesicatoria ATCC 35937]
          Length = 2153

 Score = 37.2 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 37/356 (10%), Positives = 95/356 (26%), Gaps = 19/356 (5%)

Query: 44   VGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLS-----G 98
             G  I V     + +         DI +  +      S I   +         S     G
Sbjct: 1380 TGNGITVTDRNTLSVSSIAGNTSGDIALTAQTLNLPASAISAGTGTLSLTATGSAFSTGG 1439

Query: 99   EIRVFDMYID---QPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE 155
             +   ++ +D      L   +++  ++      +       +++  I         I   
Sbjct: 1440 TLSGGNVVLDARDGLTLAHDITAGNLTLRTTNTAINQTAGQLVVGGITDANAGSAAIALT 1499

Query: 156  SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215
             +  +  +      + +  +  +        G +     G     +          + N 
Sbjct: 1500 GNNDFQTTVTLTGGAVQLNDRNALTLGTHNTGPLTVTSNGALSLGQGTVNGPLIANSTNG 1559

Query: 216  AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLN---LELSAKKSRL 272
             I     L       +    G +  N     + G   +AG+   + +   L +S+     
Sbjct: 1560 TIGQTGALTINGTSTLNAGNGAITLNNANNDFQGAVGLAGNGITVTDRNTLSVSSIAGNT 1619

Query: 273  SGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKV---SQDEENLLNFSENGAESMHDLN 329
             G+  ++   + +    + +     S            +    N++  + +G    HD+N
Sbjct: 1620 GGDIALTAQTLNLPASAISAGTGTLSLTATGSAFSTGGTLSGGNVVLDARDGLTLAHDIN 1679

Query: 330  --ETDFFEEEEKKNKND---DLKKDDIQYSVNKKEEKDNSHDKENQENFSGDKMIL 380
                         N+      +       +         ++D +N    +G  + L
Sbjct: 1680 AGNLTLRTTNAAINQTAGQLTVGGTTEANAGTAAIALAGNNDFQNAVTLTGGAVQL 1735


>gi|149197241|ref|ZP_01874293.1| hypothetical membrane protein [Lentisphaera araneosa HTCC2155]
 gi|149139787|gb|EDM28188.1| hypothetical membrane protein [Lentisphaera araneosa HTCC2155]
          Length = 614

 Score = 37.2 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 36/321 (11%), Positives = 96/321 (29%), Gaps = 18/321 (5%)

Query: 21  FTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKED-GSF 79
           F    F+  +  +   E+Q T   G ++ +   +K  +    S+  + + +    D    
Sbjct: 201 FAAEFFLMESIMKSQLEKQLTRANGAEVNIA-DLKFSMG-QGSLTIQGLEVTDSSDLSKN 258

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVIL 139
             +I+ +++  +   LL     V  + +D        +S G     + K   +       
Sbjct: 259 SVQIKDIALDLQMSDLLRSRAVVELLKVDIVEFGMVRASPGKDYDSKSKKEEEPPKEQEK 318

Query: 140 EKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS-----PLSIDSIKGSVIAEGT 194
           +K          +++  +   F   +   +  +  +  +     P+ I        AE  
Sbjct: 319 DKEGEFDLN-TYLNKAEEYKRFYDKVKEYLKNKEQSAEAKAENKPVKITKEDLRKKAEKL 377

Query: 195 GNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254
           G  + +              +     I+    +Y + I    +      +P+     ++ 
Sbjct: 378 GFLNLRARELYQNVAAWHVKQTSVSNIKTDSRSYTMEISDMSSHPVIVGKPVL---VNLG 434

Query: 255 GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQ----- 309
              +   N  L+  +     + K+   +++  +  +      ++   D            
Sbjct: 435 DGKNIEANSTLNVHQLNAQNSLKVKVTDLK-RKEDIDFGEDTAAILRDGDMSFDLEGTFS 493

Query: 310 DEENLLNFSENGAESMHDLNE 330
            +E  L F         D+  
Sbjct: 494 AKEINLPFMLKLRNLNVDVRP 514


>gi|91216464|ref|ZP_01253430.1| hypothetical protein P700755_02892 [Psychroflexus torquis ATCC
           700755]
 gi|91185258|gb|EAS71635.1| hypothetical protein P700755_02892 [Psychroflexus torquis ATCC
           700755]
          Length = 824

 Score = 37.2 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 24/226 (10%), Positives = 58/226 (25%), Gaps = 5/226 (2%)

Query: 96  LSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE 155
                ++         + F   +    + F  ++    + ++  E    K   ++I+   
Sbjct: 347 YEFNPQLTKKDFSNAIITFDEEANTKDSLFWEQNRPVPLTSLEQEDYTFKD-SLQILKNS 405

Query: 156 SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKN 214
                 +  ++                 +        G  + + N    F I +    + 
Sbjct: 406 QPYKDSIDTVSNTFKVTDPLFGYSWQNSTTNQEAGFTGLTDLNYNTVQGFNIKSGVYFRQ 465

Query: 215 KAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG 274
           K  +   +     + I  DL         +P ++            L +    K   ++ 
Sbjct: 466 KDTAGTFRT---YWEIRSDLDYGFSEETLRPSFTFTKKFNNFSKPFLIISGGVKAEEINS 522

Query: 275 NFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSEN 320
              I++    I+    +            K   SQD  N    S  
Sbjct: 523 TNPINERLSSIASVFFERNYLKLFERIFGKATYSQDVFNGFRLSAE 568


>gi|94500908|ref|ZP_01307434.1| hypothetical protein RED65_11730 [Oceanobacter sp. RED65]
 gi|94427027|gb|EAT12009.1| hypothetical protein RED65_11730 [Oceanobacter sp. RED65]
          Length = 2033

 Score = 37.2 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 21/192 (10%), Positives = 47/192 (24%), Gaps = 12/192 (6%)

Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIIS 178
               N +Q          V      ++ G     D        L+D+N   +  F     
Sbjct: 354 DSKGNVYQFPYGGFAFPVVDAGDYRIQIGESPYYDYPISTQKSLADINALTNGPFNFDEQ 413

Query: 179 PLSIDSIKGSVIAEGTGNFDNKRSAF----KITANFPAKNKAISLKIQLFPLAYPIIIDL 234
                +    +        D K +          N     + ++ +IQ+     P   ++
Sbjct: 414 GSRALAFNSGITFRMDVPLDPKDNTVLLTKTANKNSAGIGELVAYRIQIENTEIPGT-NI 472

Query: 235 FGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS-GNFKISDGNVRISRYKLQSI 293
                  +     +G   + G+      +    +    + G+  +           LQ +
Sbjct: 473 KIEDRLPQGFRYVAGSAQLNGNQLVDPTISADGQLLSFNIGDLAVE------ESLTLQYL 526

Query: 294 LPNSSTDEDNKT 305
              S        
Sbjct: 527 TRISVNTPVGTA 538


>gi|296129824|ref|YP_003637074.1| pyruvate kinase [Cellulomonas flavigena DSM 20109]
 gi|296021639|gb|ADG74875.1| pyruvate kinase [Cellulomonas flavigena DSM 20109]
          Length = 478

 Score = 37.2 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 17/164 (10%), Positives = 42/164 (25%), Gaps = 2/164 (1%)

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127
           D+    +  G  E   + +          SG      + +  P +      +G  +    
Sbjct: 29  DVARLNRSHGDTEVH-KRVYDNVRAAAKASGRSVAVLVDLQGPKIRLGRFVEGKHDLAVG 87

Query: 128 KSTMDMIHNVILEKIHVKGGRIKI-IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIK 186
                    +   K  V      +  D +      + D  + +    +N    ++   + 
Sbjct: 88  DVFTITTDEIEGTKERVSTTFKGLPGDVKPGDPILIDDGKVLVRVTEVNGNDVVTRVEVP 147

Query: 187 GSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
           G V      N      +    +     +   +L +    +A   
Sbjct: 148 GPVSNNKGLNLPGVAVSVPAMSEKDEDDLRWALNVGADLIALSF 191


>gi|145224175|ref|YP_001134853.1| pyruvate kinase [Mycobacterium gilvum PYR-GCK]
 gi|315444510|ref|YP_004077389.1| pyruvate kinase [Mycobacterium sp. Spyr1]
 gi|145216661|gb|ABP46065.1| pyruvate kinase [Mycobacterium gilvum PYR-GCK]
 gi|315262813|gb|ADT99554.1| pyruvate kinase [Mycobacterium sp. Spyr1]
          Length = 472

 Score = 37.2 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/148 (8%), Positives = 38/148 (25%), Gaps = 11/148 (7%)

Query: 89  RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR 148
           R       +G        +  P +     + G + W            + ++       R
Sbjct: 50  RVRAASDATGRAVGILADLQGPKIRLGRFADGPTVW-----RNGETIRITVDDFEGTHDR 104

Query: 149 IK------IIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRS 202
           +         D        + D N+ +    ++    +   +  G V      +      
Sbjct: 105 VSTTYKRLAQDATPGDRVLVDDGNVGLVVEHIDGNDVVCTVTEGGKVSNNKGMSLPGMNV 164

Query: 203 AFKITANFPAKNKAISLKIQLFPLAYPI 230
           +    +     +   +L++ +  +A   
Sbjct: 165 SAPALSEKDIDDLEFALRLGVDLVALSF 192


>gi|194333772|ref|YP_002015632.1| hypothetical protein Paes_0942 [Prosthecochloris aestuarii DSM 271]
 gi|194311590|gb|ACF45985.1| conserved hypothetical protein [Prosthecochloris aestuarii DSM 271]
          Length = 373

 Score = 37.2 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 37/295 (12%), Positives = 88/295 (29%), Gaps = 44/295 (14%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTD-----FREDFERQATLIVGKKIAVKGGIKI 56
           +++ L     LF+ ++   +T    +DW       +R + + +  L   +    +  +++
Sbjct: 1   MKKFLT----LFAFLVAAGWTNAQAVDWNWKGDVRYRYEIQDKEELDDNRD-RHRLRVRL 55

Query: 57  HILPFPSVFFK-DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFY 115
            + P+ +      ++I     G                 +   +           +LN  
Sbjct: 56  GVYPWINEELSAGVQISTAGAGDP---------------VSRNQTLGDGFTAKDFNLN-- 98

Query: 116 LSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLN 175
              +   ++      MD   N++L K  VK   I++ D   D    L  L  Q       
Sbjct: 99  ---EAFIDFHPMSYGMDGKVNLLLGKREVKSTLIRVNDLVWDSDLTLEGLTFQFGKDGSK 155

Query: 176 IISPLSI-----------DSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLF 224
             S  ++            S          G +  +             +      +   
Sbjct: 156 QKSGFNVVAGYYFIDELSSSEDDPFFWAVQGAYTGEAGPLGFMIGAGYYDFQNVQYMDAS 215

Query: 225 PLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
            L      D FGN  ++  + +Y   +++   F+ +          +  G + ++
Sbjct: 216 VLGDWADEDNFGNSAYSYDEYLYD--YNILELFANIGGKFNGDLPWKAYGQYAVN 268


>gi|120403808|ref|YP_953637.1| pyruvate kinase [Mycobacterium vanbaalenii PYR-1]
 gi|119956626|gb|ABM13631.1| pyruvate kinase [Mycobacterium vanbaalenii PYR-1]
          Length = 472

 Score = 37.2 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/143 (9%), Positives = 42/143 (29%), Gaps = 1/143 (0%)

Query: 89  RAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGR 148
           R       +G        +  P +     + G + W   ++    + + +     V    
Sbjct: 50  RVRAASDATGRAVGILADLQGPKIRLGRFADGPTMWANGETVRITVEDFVGNHDRVSTTY 109

Query: 149 IKI-IDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKIT 207
            ++  D +      + D N+ +    ++    +   +  G V      +      +    
Sbjct: 110 KRLAQDAKPGDRVLVDDGNVGLVVEHIDGNDVVCTVTEGGKVSNNKGMSLPGMNVSAPAL 169

Query: 208 ANFPAKNKAISLKIQLFPLAYPI 230
           +     +   +L++ +  +A   
Sbjct: 170 SEKDIDDLEFALRLGVDLVALSF 192


>gi|321257840|ref|XP_003193726.1| hypothetical protein CGB_D6440W [Cryptococcus gattii WM276]
 gi|317460196|gb|ADV21939.1| conserved hypothetical protein [Cryptococcus gattii WM276]
          Length = 818

 Score = 37.2 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 26/233 (11%), Positives = 63/233 (27%), Gaps = 11/233 (4%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFRED-FERQATLIVGKKIAVKGGIKIHILP 60
           +RR+++ +     ++++ A    + +     R    +  A+       ++    ++  LP
Sbjct: 1   MRRLILAVPHTLVLIVIKALAAAMCVQSIKSRRLSIDSTASSRKLSSSSITTASEVRPLP 60

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
                   + +          +  GL +         G I      +     N      G
Sbjct: 61  S-------VTLPGPSHLFPPLQSAGLPIDPSEDSTNPGRIPDETQNVLGLDTNLQRQQHG 113

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
           +       S         + +     G    ID  S  V   S +   I      ++S  
Sbjct: 114 LFPSSPSSSNTPSGTTQFIGQSTPGSG---FIDPASLNVASSSAIENLIDIPTDAMLSTP 170

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIID 233
           +I S    +  + +  +      +    N        +   +   +      D
Sbjct: 171 AIPSYPELLTFDPSWEWFGNLFGWGSDTNIDLDVGLQNSMFESNGVGPASSTD 223


>gi|298528941|ref|ZP_07016344.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298510377|gb|EFI34280.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 951

 Score = 37.2 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 32/321 (9%), Positives = 94/321 (29%), Gaps = 33/321 (10%)

Query: 20  AFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSF 79
             ++P  ++                 ++  ++      + P   +   DIR       + 
Sbjct: 40  YISLPFILER-----FLVSYMQDQGIQEAQIRVD---SVGPR-GIHLSDIR-----GENL 85

Query: 80  ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI----H 135
             +++ +++R  +  L+ G      + +   +     + +G+      K           
Sbjct: 86  GLEVDRVAVRLGWSSLMQGR--ADRIVVTGLNWRAGYTPEGLDLGLPFKGDDRERELAVP 143

Query: 136 NVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG 195
            +  + + ++     +          LS +    +    NI +      +  ++  +G  
Sbjct: 144 ALPFDVLELQSSSFLMEYAGLGWRVPLSGV--VQAGDVKNIRAEFETRLLGSALQIKGLA 201

Query: 196 NFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN-EKQPIYSGVFSVA 254
           + ++ R+   I +++P   +  SL  Q  PL   + +   G L    +    +       
Sbjct: 202 DLESGRADVSIQSSWPEDERFESLPRQGLPLQAELSLTWAGGLDDPGDGCIDFYAELGRQ 261

Query: 255 GDFSKLLNLELSAKKSRLSGNFK----------ISDGNVRISRYKLQSILPNSSTDEDNK 304
                     L      L G F           +    +++  ++   I         + 
Sbjct: 262 HLTLAGTKFGLDRAALNLQGTFDGFSRDSLQAGVQLEGLKLGDFQFAGIDMLLKDRGVSS 321

Query: 305 TKVSQDEENLLNFSENGAESM 325
            +   ++ + L+    G    
Sbjct: 322 MQARLEKPDRLDLDLTGTHED 342


>gi|148244242|ref|YP_001218936.1| hypothetical protein COSY_0076 [Candidatus Vesicomyosocius okutanii
           HA]
 gi|146326069|dbj|BAF61212.1| hypothetical protein [Candidatus Vesicomyosocius okutanii HA]
          Length = 266

 Score = 37.2 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 24/267 (8%), Positives = 74/267 (27%), Gaps = 28/267 (10%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++++   L  L  ++++    V   I     ++  ++ A  I+   I +           
Sbjct: 1   MKKIGYFLIGLIVILVLIMMLVFDSIG----KKYVQKYAQNILRTPITIS-QFSSSFWDK 55

Query: 62  PSVFFKDIRIDQKEDG--SFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSK 119
             +    I +    +        ++   ++      L   I + ++  D  H     +  
Sbjct: 56  -RLNIDFIEVQNPPNFNNKDAFYLDHFVLKIGDDTTLDL-IVIDELSFDGMHFILEQNKT 113

Query: 120 GVS----------------NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLS 163
            V+                     ++   +   + + + +V    +KI  +   +   + 
Sbjct: 114 NVNLVTLIDNLGKSSNNTTLSSSEETHGVIDKRIKINQFNVINTTLKIDTKWLKETIKVP 173

Query: 164 DLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAF---KITANFPAKNKAISLK 220
           ++NLQ       I        +   V+       + K       +I      +    +++
Sbjct: 174 NINLQKFGGNSGITLNKVGQELMEIVLNNLEDALEKKGIELGEKEIKETLIQRLWINNIQ 233

Query: 221 IQLFPLAYPIIIDLFGNLFWNEKQPIY 247
                  +   +D         +    
Sbjct: 234 ENFKLDKFKESLDFSETKKLQNQAKDL 260


>gi|218460859|ref|ZP_03500950.1| sugar ABC transporter, permease protein [Rhizobium etli Kim 5]
          Length = 223

 Score = 37.2 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 5  VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFER---QATLIVGKKIAV-KGGIKIHILP 60
          + + +G L  +V+     +P F+D  +      +        +G+   +  GG+ + +  
Sbjct: 17 IGLSIGTLLVMVVASVILLPDFMDPENLSNLLAQSTVLVISALGQTFVILTGGLDVSVGS 76

Query: 61 FPSVFFKDIRIDQKE 75
            S+    + +D  E
Sbjct: 77 VISLTTTIMTLDLPE 91


>gi|325576965|ref|ZP_08147536.1| hypothetical protein HMPREF9417_0277 [Haemophilus parainfluenzae ATCC
            33392]
 gi|325160923|gb|EGC73042.1| hypothetical protein HMPREF9417_0277 [Haemophilus parainfluenzae ATCC
            33392]
          Length = 1299

 Score = 37.2 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 40/346 (11%), Positives = 105/346 (30%), Gaps = 34/346 (9%)

Query: 37   ERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLL 96
             ++    +G    +   + +   P                 + E   E   +  + +  L
Sbjct: 725  NKKIQATIGSHCWINQDLDLC-FPQ----------QFTAGKNGEVPFELKRINLDLVNKL 773

Query: 97   SGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKI-IDQE 155
             G+  +      +  + ++       N     + + +   +      +   ++ +  D +
Sbjct: 774  MGQDTLKGQLQSRGKVAWFTDKPLQLNVAVEGNNIGVAQKLDYRTFKLDIPKLSVNADIQ 833

Query: 156  SDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNK 215
            ++ +   SD+N+Q       I + L I+ +       GT      R +         ++ 
Sbjct: 834  NNNLTLKSDINVQNQG---RIGTDLKINDLSKGRQLGGTFTIGGLRLSLANQLFSSGESL 890

Query: 216  AISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
               +            +   GNL    ++P+ +G F +    +KL +L       +++  
Sbjct: 891  DGEVV---------SRLSFGGNL----EKPLLNGNFDIRNVKTKLKSLPFDVTDGQVAIR 937

Query: 276  FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335
            F  +   +           P+S  + + +   +  +               D+      +
Sbjct: 938  FNGTSSTL-----NGHVQTPDSKLNINGQANWAHMDNWTAEVRAQADNFKVDIPSMAKLK 992

Query: 336  EEEKKNKNDDLKKDDIQYSVNKKEEKDNSHDK-ENQENFSGDKMIL 380
                       K  D+  +V+    +       +N E  S D++IL
Sbjct: 993  VSPNVVVKASPKLLDLSGNVDIPWARIAIESLPDNAEPVSEDEVIL 1038


>gi|325926166|ref|ZP_08187526.1| hypothetical protein XPE_1492 [Xanthomonas perforans 91-118]
 gi|325543430|gb|EGD14853.1| hypothetical protein XPE_1492 [Xanthomonas perforans 91-118]
          Length = 816

 Score = 36.8 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 28/278 (10%), Positives = 75/278 (26%), Gaps = 34/278 (12%)

Query: 36  FERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKE----------DGSFESKIEG 85
              Q   +  +++ ++G  ++ +  F  +    + I                    +   
Sbjct: 231 VAEQVQAVSLRQLHIEGQGQLQLGLFKQLRGGPMEIFPSHAVFESARVRWGQDEVMRNGQ 290

Query: 86  LSMRAEF----------LPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH 135
           L + A            L +L     +  ++ D   L+    ++G      R        
Sbjct: 291 LRIDASIARHAPDQASGLAVLQLTDALIAVHGDTAALDVTRHAQGRHTLATRAGKGRADG 350

Query: 136 NVILEKIHVKGG-----RIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVI 190
            +   +  ++ G     R  + D        L +L  Q+       +     +     + 
Sbjct: 351 ELRWIRGALQPGSQLQWRAPLHDSTRTPAALLGELTAQLQVDQDMRLKVSMPEPADAGLT 410

Query: 191 AEGTGNFDNKRSAF-KITANFPAKNKAISLKIQLFPLAYPI-------IIDLFGNLFWNE 242
            +       ++     + +  P  +    L  QL  L +          + L G    + 
Sbjct: 411 LDADLRVQGRQLPVQSMRSLLPRTSGHARLHWQLSSLRWIAALFPDVDWLTLEGEGLVDA 470

Query: 243 KQPIYSGVFSV-AGDFSKLLNLELSAKKSRLSGNFKIS 279
              I  G  +  +      ++ ++      ++G     
Sbjct: 471 DLRIDHGQLAAGSRLQVPHVHAQVGVMGHAITGQASAD 508


>gi|304389366|ref|ZP_07371331.1| non-specific serine/threonine protein kinase [Mobiluncus curtisii
           subsp. curtisii ATCC 35241]
 gi|304327484|gb|EFL94717.1| non-specific serine/threonine protein kinase [Mobiluncus curtisii
           subsp. curtisii ATCC 35241]
          Length = 663

 Score = 36.8 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 69/222 (31%), Gaps = 33/222 (14%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFRED---FERQATLI----VGKKIAVKGGIK 55
           R  LIG      V+L    T         +R       +Q +          +  +   +
Sbjct: 373 RWFLIGGIIGAIVLLAAILTWFFMWGPGSYRPMVDVVNQQWSDASKSLTAADVTFE---R 429

Query: 56  IHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAE------FLPLLSGEIRVFDMYIDQ 109
           + +    +V   ++       G    + +   +          +P L+G+ +   + + +
Sbjct: 430 VDVFDD-NVPAGNVARTDPAPGKPLGRFQKAKIFVSKGVEMLTMPDLTGKTQEEALELVK 488

Query: 110 ------PHLNFYLS---SKGVSNWFQRKSTMDMIHNVILEKIHVKGGR--IKIID----Q 154
                 P ++        +G  +  Q  +    + +  + K+ V  GR  + ++D     
Sbjct: 489 KARFNAPQVSEEFHDTVPEGQVS-AQDPAPNASVPHNTIVKVTVSKGRQPVTMLDLVGKP 547

Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196
            S+    L+ + LQ   +            I  SV    T +
Sbjct: 548 GSEAQSELTKVGLQPQVKEEFSDGVPKGKVISQSVAPNTTLH 589


>gi|119471771|ref|ZP_01614131.1| hypothetical protein ATW7_08971 [Alteromonadales bacterium TW-7]
 gi|119445394|gb|EAW26682.1| hypothetical protein ATW7_08971 [Alteromonadales bacterium TW-7]
          Length = 1229

 Score = 36.8 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 40/368 (10%), Positives = 104/368 (28%), Gaps = 30/368 (8%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILP 60
           +L+++   +  +   +++  F +        F      +    +  +I   G        
Sbjct: 3   ILKKITATVSAILVSLIISVFCLLFTAPGNQFIAYTANKVVDGLHIEIK-DGR------- 54

Query: 61  FPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKG 120
           F      ++R                 ++ +        I V ++      L    + + 
Sbjct: 55  FIYNDAFNVRFKNNG-----LDFNAQQLKIDLFWWQCDGICVDNLSAKSIKLTLPKTVEA 109

Query: 121 VSNWFQRKSTMDM-IHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFL---NI 176
                           NV ++ I V      +    +D       L+ +     L   ++
Sbjct: 110 QDETPSEPLEKITLPFNVSIKNIAVN--EFTLNHPSADVSVNNFKLSAKAEGSKLTVKSL 167

Query: 177 ISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFG 236
             P  + ++K            + ++A       P       + + +  L    +    G
Sbjct: 168 NIPSILVALKEQEQPAKAQTAQSNKAALTQLPALPDIEFTSPIDLAIEALDIAKVTIEQG 227

Query: 237 NLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKIS-------DGNVRISRYK 289
           +   N +    S   SV      L +L  + ++ +L+              G V +   +
Sbjct: 228 DAQHNIEN--ISLQLSVEDAVINLQSLSATYEQWQLNTQLDAELLGNLPVKGLVTLKSDE 285

Query: 290 LQSILPNSSTDEDNKTKVSQDEENLLNFSENG--AESMHDLNETDFFEEEEKKNKNDDLK 347
            Q+ L  +    D    +    +  L  + N    +  +    +    +     +N++LK
Sbjct: 286 HQANLELNGDLADLTIHLETSGQYPLTLTANANLKQKNYPFELSGKINQWLIDAQNNELK 345

Query: 348 KDDIQYSV 355
             ++    
Sbjct: 346 VKNVSLKA 353


>gi|315634258|ref|ZP_07889545.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
 gi|315476848|gb|EFU67593.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
          Length = 781

 Score = 36.8 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 85/316 (26%), Gaps = 36/316 (11%)

Query: 57  HILPFPSVFFKDIR---IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113
           H   +     +D+    I     GS     +   +R       S    V  +  D+  L 
Sbjct: 147 HFWGWLRDTPEDVTNTVISVTGKGSLLQYPKNAEIRVAASDWSSKTNTVNVLVADEGQLT 206

Query: 114 FYLSS--KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL-NLQIS 170
                   G +N     +      +V   K+     ++K    ++D   F  ++ +   +
Sbjct: 207 AGTLRVGNGTTNIQIGDNNKAGTFDVEKIKLEENPQKVKFDFAQTDNFNFTPEMTSASPT 266

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPI 230
            + ++ +   S  ++       G  N +   +   +           S+K  +       
Sbjct: 267 TKIVDFVQRGSGTTLFAPRNMSG-VNSNVNITNGTLKVGRDNAFGDASVKSNVDIGE--- 322

Query: 231 IIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKL 290
                G    N      + + +         N     K   + G++    G + +     
Sbjct: 323 ----KGTFELNNFNATVTNLNNKGTLDLTSENAN---KTLTVEGDYHSDGGKLIVKTTWN 375

Query: 291 QSILPNSSTDEDNKTK----------------VSQDEENLLNFSENGAESMHDLNETDFF 334
            +   + +     K                  + Q  EN+ +      +   D N    F
Sbjct: 376 NNNSSSDTLHIKGKATGRTIVSTRNGFIEGDVLRQARENIFSADMIKMD---DPNSEAIF 432

Query: 335 EEEEKKNKNDDLKKDD 350
           E   K    D+ +   
Sbjct: 433 EGTAKTRNADEAQLAK 448


>gi|293393183|ref|ZP_06637498.1| hypothetical protein HMPREF0758_0834 [Serratia odorifera DSM 4582]
 gi|291424329|gb|EFE97543.1| hypothetical protein HMPREF0758_0834 [Serratia odorifera DSM 4582]
          Length = 1272

 Score = 36.8 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 45/346 (13%), Positives = 100/346 (28%), Gaps = 46/346 (13%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP--------SVFFKDIR 70
             F  PL  D  + R   +     I G+++ + G   + I             +      
Sbjct: 228 ALFAKPLLPDLPEVRLPLDITVKEIRGEQLRLTGDTDVLITSLLLQASTLDHHLQLDKFD 287

Query: 71  IDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN----------FYLSSKG 120
           +   +   F      L  +     + +G + V  +  ++  LN            ++  G
Sbjct: 288 VKSPQGTLFAHGQATLKDQWPVEMVANGTLNVEPLKGEKVKLNVGGALREALSVAMNLSG 347

Query: 121 VSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPL 180
                    T      + L  + ++G R++      +  Y +  L L+ + +  +     
Sbjct: 348 PVGAQLDLQTQLAEAGLPLA-LTLEGKRLRWP-LSGEAQYQVDGLRLRFNGKATDYALST 405

Query: 181 SIDSIKGS-----VIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLF 235
             +          +  +G GN +  +      A         +L      +++   + L 
Sbjct: 406 RANIKGQDLPPAVLTLDGKGNVEQFKLQRLRLAALQGHADLTALVDWSKAISWTSQLQLS 465

Query: 236 G---NLFWNEKQPIYSGVFSVAGD--------FSKLLNLELSAKKSRLSGNFKISD---G 281
           G      W E      G  +  G             L L+ + K++++S    +S    G
Sbjct: 466 GINTAKQWPEWPAKLDGKITTRGSLYGGSWQLQVPTLQLDGNVKQNKVSARGSLSGNAAG 525

Query: 282 NVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHD 327
             +I    L      +  +   +      +E   N   +      D
Sbjct: 526 QWKIPAVDLALGR--NRLNVKGQL-----DEKSWNLDADIDAPQLD 564


>gi|73983823|ref|XP_855059.1| PREDICTED: similar to AHNAK nucleoprotein isoform 1 [Canis
            familiaris]
          Length = 4966

 Score = 36.8 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 39/326 (11%), Positives = 98/326 (30%), Gaps = 38/326 (11%)

Query: 53   GIKIHILPFPSVFFKDIRIDQKED--GSFESKIEGLSMRAEFLPL------LSGEIRVFD 104
             I +   P   +   D+ I+  E      + K+  ++++A  + +      L G     D
Sbjct: 2089 DIDVS-APKVDIEVPDVSIENPEGKIKGPKFKMPEMNIKAPKISMPDVDLHLKGPKVKGD 2147

Query: 105  MYIDQPHL--NF---YLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQV 159
            + +  P +  +     +  KG               +  L+   VK  +I +        
Sbjct: 2148 VNVSLPKVEGDLKGPEVDLKGPKVDIDVPDVDVHGPDWHLKMPKVKMPKISM----PGFK 2203

Query: 160  YFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG-TGNFDNKRSAFKITANFPAKNKAIS 218
                ++++ +    +++  P  +D     V  EG  G + + +           K     
Sbjct: 2204 GEGPEVDVNLPKADIDVSGP-KVDVECPDVNIEGPEGKWKSPKFKMPEMHFKTPKISMPD 2262

Query: 219  LKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSG-NFK 277
            + + L        +D+ G        P   G         K   ++++     + G ++ 
Sbjct: 2263 IDLNLTGPKIKGDVDVTG--------PKLDGDLKGPEVDLKGPKVDINVPDVDVHGPDWH 2314

Query: 278  ISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEE 337
            +    V++ ++ +             +           +   +G +   +  + +    E
Sbjct: 2315 LKMPKVKMPKFSMPG--------FKGEGPEVDVNLPKADIDVSGPKVDIEGPDVNIEGPE 2366

Query: 338  EKKNKNDDLKKDDIQYSVNKKEEKDN 363
             K  K    K  ++     K    D 
Sbjct: 2367 GK-LKGPKFKMPEMNIKAPKISMPDF 2391


>gi|294784592|ref|ZP_06749881.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
 gi|294487808|gb|EFG35167.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
          Length = 495

 Score = 36.8 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 8/109 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++  IG+  LF VV+V              +E  ER+ +      + + G + +     
Sbjct: 1   MKK-FIGILLLFIVVIVTVLYFARDF---LLKEYLERKMSKANNAPVTI-GSVDLDYF-E 54

Query: 62  PSVFFKDIRI-DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQ 109
             V  KDI++            I+ L    E        I   D  I  
Sbjct: 55  SYVTLKDIKVMSNLYKDEIFISIDELKSYYEI-DFSKKVITFDDTEISG 102


>gi|168055739|ref|XP_001779881.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668694|gb|EDQ55296.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 2019

 Score = 36.8 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 30/111 (27%), Gaps = 6/111 (5%)

Query: 25  LFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGSFESKIE 84
           L++D            T  +G+ + +    ++      SV      I    +      I 
Sbjct: 17  LYMDRNIL-PPLASILTTHLGRDVRLGKVERLSF---LSVSLGTSSIGPHAEEFSCGGIP 72

Query: 85  GLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIH 135
            + +    L  L     V D  +  PH+          +W       +   
Sbjct: 73  AIQIHFRPLKSLKRGQVVLDAVLRNPHVLVAQKRD--WSWLSIPMLSEKKP 121


>gi|187929668|ref|YP_001900155.1| hypothetical protein Rpic_2596 [Ralstonia pickettii 12J]
 gi|187726558|gb|ACD27723.1| protein of unknown function DUF490 [Ralstonia pickettii 12J]
          Length = 1304

 Score = 36.8 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 46/366 (12%), Positives = 105/366 (28%), Gaps = 27/366 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR +   + FL  +VL  A  +   I                 G    V G ++   +  
Sbjct: 31  LRWLGGLVAFLLVIVLALAGWLVWAIHSQSGTAQL-WALATRFG-NAYVSGKLEGGTVRD 88

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             V  +D+ +     GS E +I+ +  R     +  G       Y+   +++  L     
Sbjct: 89  -GVSLRDLHVRA---GSTEVRIDHVEGR---WAITRGPWHAHFAYLRAGNVDVILHPTPP 141

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP-- 179
                  +++ +   + ++++ V   R+ I    S         +L       N++    
Sbjct: 142 IPPSGPPNSLVLPLALDVDRLAVD--RLAIRQGTSTTELKSIAGSLHTDGTHHNVLLDGM 199

Query: 180 -LSIDSIKGSVIAEGTGNFDNK-RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
                 +  ++   GT  +     +          + +  S+  QL      + ID  G 
Sbjct: 200 ETPAGKLAATLRMTGTRPYPLTGAATLATQFEVNGQKQDASVSAQLSGSLETLHIDATGT 259

Query: 238 LFWNEKQPIYS----GVFSVAGDFSKLLNLELSA---KKSRLSGNFKISDGNVRISRYKL 290
                 Q +      G   ++       ++   A        S +             K 
Sbjct: 260 GAKLTAQALIDATPFGALPLSRAVVSAEHVNPRAFAPGAPEASLSIHADLR----PDEKA 315

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350
           +++      + DN  +    ++  L      A+   + N+      + +      L    
Sbjct: 316 KTLTVAGPIEIDN-AQPGTLDKQKLPLQSLRAQVRLNENDQQLTGLDVRLLGGAVLTGGA 374

Query: 351 IQYSVN 356
                +
Sbjct: 375 DVQKGH 380


>gi|37528372|ref|NP_931717.1| hypothetical protein plu4553 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787810|emb|CAE16925.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 1257

 Score = 36.4 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 30/308 (9%), Positives = 85/308 (27%), Gaps = 47/308 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++V I    + +++++    +                     G    +        +P 
Sbjct: 4   MKKVSIAFLLIVTLLVIAVAGL----------------VGTQSGLHFMINS--AARWVPG 45

Query: 62  PSVF-----FKDIRIDQKEDGSF--ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
             +      ++D+ +   +         ++ L +      L   ++ V  +  +   +  
Sbjct: 46  LDITSVSGGWRDLTLKGVKYQMPGVNVNVDQLHLSLRLSCLKKSQLCVNALTTEGVKVAI 105

Query: 115 ---YLSSKGVSNWFQRK-STMDMIHNVILEKIHVKGGRIKIID--------------QES 156
               L   G  +      + +   + V L+ + VK   + + D              Q+ 
Sbjct: 106 NTKQLPPAGEPSPKSEPFTELRTPYPVSLDLLSVKNVTVTVNDTIFALDEFRTAAHWQQK 165

Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEG---TGNFDNKRSAFKITANFPAK 213
                 + +N  +          L I   +G             +  +  F         
Sbjct: 166 ALTLKPTKINGLLVELPKTPPERLKIAEAEGKAKRGSEPEKSLAEILKKLFSQPLLATLP 225

Query: 214 NKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLS 273
              I L I +  ++    + L G+      Q +              LN+++      ++
Sbjct: 226 EVPIPLDITVAGISGK-QLRLTGDTNITINQFLLQLSNQGQQIQLNKLNVKMPEGSLAIN 284

Query: 274 GNFKISDG 281
           G+  ++  
Sbjct: 285 GSATLAQQ 292


>gi|309781564|ref|ZP_07676299.1| signal peptide protein [Ralstonia sp. 5_7_47FAA]
 gi|308919669|gb|EFP65331.1| signal peptide protein [Ralstonia sp. 5_7_47FAA]
          Length = 1302

 Score = 36.4 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 46/366 (12%), Positives = 105/366 (28%), Gaps = 27/366 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           LR +   + FL  +VL  A  +   I                 G    V G ++   +  
Sbjct: 29  LRWLGGLVAFLLVIVLALAGWLVWAIHSQSGTAQL-WALATRFG-NAYVSGKLEGGTVRD 86

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
             V  +D+ +     GS E +I+ +  R     +  G       Y+   +++  L     
Sbjct: 87  -GVSLRDLHVRA---GSTEVRIDHVEGR---WAITRGPWHAHFAYLRAGNVDVILHPTPP 139

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISP-- 179
                  +++ +   + ++++ V   R+ I    S         +L       N++    
Sbjct: 140 IPPSGPPNSLVLPLALDVDRLAVD--RLAIRQGTSTTELKSIAGSLHTDGTHHNVLLDGM 197

Query: 180 -LSIDSIKGSVIAEGTGNFDNK-RSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
                 +  ++   GT  +     +          + +  S+  QL      + ID  G 
Sbjct: 198 ETPAGKLAATLRMTGTRPYPLTGAATLATQFEVNGQKQDASVSAQLSGSLETLHIDATGT 257

Query: 238 LFWNEKQPIYS----GVFSVAGDFSKLLNLELSA---KKSRLSGNFKISDGNVRISRYKL 290
                 Q +      G   ++       ++   A        S +             K 
Sbjct: 258 GAKLTAQALIDATPFGALPLSRAVVSAEHVNPRAFAPGAPEASLSIHADLR----PDEKA 313

Query: 291 QSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDD 350
           +++      + DN  +    ++  L      A+   + N+      + +      L    
Sbjct: 314 KTLTVAGPIEIDN-AQPGTLDKQKLPLQSLRAQVRLNENDQQLTGLDVRLLGGAVLTGGA 372

Query: 351 IQYSVN 356
                +
Sbjct: 373 DVQKGH 378


>gi|152989158|ref|YP_001348055.1| hypothetical protein PSPA7_2695 [Pseudomonas aeruginosa PA7]
 gi|150964316|gb|ABR86341.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 1221

 Score = 36.4 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 37/343 (10%), Positives = 89/343 (25%), Gaps = 40/343 (11%)

Query: 75  EDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMI 134
                +  +E  ++      L S  + +  +  ++  L    S  G  +      T+ + 
Sbjct: 63  AQDGTQLVLERPALDWSPGCLASLRLCLKRVAAERVELILPPSDDGAPSGPVELPTLQLP 122

Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
            +V L ++ +    +   +Q +D       L   +    L          ++G +   G 
Sbjct: 123 LSVELGEVAIGSFLLDGNEQVADLDLSARWLADGLHIDALKARGFGLSLELRGRLQPSGD 182

Query: 195 GNFD-----------NKRSAFKITANFPAK-------------NKAISLKIQLFPLAYPI 230
                           K     +      +             + ++  ++Q      P 
Sbjct: 183 WPLQAEAAVGLPAPEGKPWNLAVQVGGELQKALTLKGRSSGYLDGSLEGQLQALAENLPA 242

Query: 231 II-----DLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS------RLSGNFKIS 279
            +        G     +   + +      GD      +   A          LS + ++ 
Sbjct: 243 RLLIRADGFKGAAGLPDTLTLNAIQLDAGGDLKSGYLIRGGASLPGEGGAVALSLDGRVD 302

Query: 280 DGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESM-HDLNETDFFEEEE 338
                I + +L +         D   ++   E    + + +  +     L          
Sbjct: 303 ALGADIRQLRLDAG---GEQRLDLVGRLDWRESLAADATLDWQDFPWLRLYPLAEPPPVT 359

Query: 339 KKNKNDDLKKDDIQYSVNKKEEKDNSHDKENQEN-FSGDKMIL 380
            K    ++   D +Y  N               +  SGD + L
Sbjct: 360 LKTFKAEVHYQDQRYLGNFSAAASGPAGDFTLASPVSGDLVQL 402


>gi|260591071|ref|ZP_05856529.1| conserved hypothetical protein [Prevotella veroralis F0319]
 gi|260536936|gb|EEX19553.1| conserved hypothetical protein [Prevotella veroralis F0319]
          Length = 1708

 Score = 36.4 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 31/330 (9%), Positives = 93/330 (28%), Gaps = 58/330 (17%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +R ++  +     + L+    +          +      +   G ++++    ++++   
Sbjct: 7   MRWLVAIVATPVVLFLLLVVLLYCPPVQNWAVKQVATYVSNHTGMRVSID---RVNLSYP 63

Query: 62  PSVFFKDIRIDQKEDGSF-----ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHL---- 112
             +    +++ +  D         + +  L +    LPLL   + V ++           
Sbjct: 64  LDLQLDGLKMIKANDSIPTQKDTVADVHRLVVSIGLLPLLEKRVEVNELTFTGLKANTTN 123

Query: 113 ---------NFYLS------------------SKGVSNW---------FQRKSTMDMIHN 136
                    N                      +     W          +       +  
Sbjct: 124 FIGDLRIKGNLQRLHIVSHAVNLVGDSVRVNKADIEGGWIDVALGDTVPEDPHKQKPLWR 183

Query: 137 VILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGN 196
           + ++K+++     K+       +      + ++    L +   +   +    +   G   
Sbjct: 184 INIDKMNLAKTDFKLHMPGDTMIVRAQFGDAKVRGTELLLHDNIYKVAD---IDWHGGAF 240

Query: 197 FDNKRSAFKITANFPAKNKAIS-LKIQLFPLAYPI-IIDLF---GNLFWNEKQPIYSGV- 250
             ++    +  A F A + A++ + + +    +    I L    GN        +     
Sbjct: 241 NYDQPFVKRAAAGFDAAHIAMTDVNLGIDSFFFAAPKISLRVRAGNFKERSGLVVRDLRC 300

Query: 251 -FSVAGDFSKLLNLELSAKKSRLSGNFKIS 279
            F +     +L +L L    S  SG  ++ 
Sbjct: 301 PFRMDATSIQLPSLYLLMPNSEFSGRLRMD 330


>gi|126333631|ref|XP_001365765.1| PREDICTED: similar to AHNAK nucleoprotein [Monodelphis domestica]
          Length = 2138

 Score = 36.4 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 30/247 (12%), Positives = 65/247 (26%), Gaps = 30/247 (12%)

Query: 60   PFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPL-------LSGEIRVFDMYIDQPHL 112
            P       D+ +   +       + G  +              +SG+I+   + +D P +
Sbjct: 1596 PNLKFEGPDVTLKGPQGDLPSVNLSGPDLDLNLKGPKLKGDLDISGDIKCPKVSVDAPDV 1655

Query: 113  NFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISAR 172
            +                    +  + L +  +      +    +        +++ +   
Sbjct: 1656 SLE-----------APGGAIKLPQMKLPQFGISSQGSNLDVNVAGPELKGPGVDVHLRGV 1704

Query: 173  FLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAIS------LKIQLFPL 226
             L     +S   I   +     G               PA   A+       L+  L P 
Sbjct: 1705 DLKGP-QMSGPQISSDMDFNLEGPKIKGGFGASGDMKGPAVGVALPGISVQGLEGNLQPP 1763

Query: 227  AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
               +          N K P   G  S +G        ++S +    S +     G + + 
Sbjct: 1764 DVKLPRCEAELPAVNVKLPT--GKLSGSGIGLHGAAPDVSVQGPAFSAS---DLGGISLK 1818

Query: 287  RYKLQSI 293
              K+Q  
Sbjct: 1819 GPKIQGG 1825


>gi|261345188|ref|ZP_05972832.1| conserved hypothetical protein [Providencia rustigianii DSM 4541]
 gi|282566880|gb|EFB72415.1| conserved hypothetical protein [Providencia rustigianii DSM 4541]
          Length = 1259

 Score = 36.4 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 40/379 (10%), Positives = 109/379 (28%), Gaps = 53/379 (13%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +      +  ++++    +                     G   A+       ++P 
Sbjct: 4   MKWLKWIAITILLLLVLVVGALYWV-------------LGTKSGLHFALNTAT--RLVPE 48

Query: 62  PSVF-----FKDIRIDQKEDGSFESKIE--GLSMRAEFLPLLSGEIRVFDMYIDQPHLNF 114
            ++       +D+ +   +       ++   + +      L S E+ + D+  D   +N 
Sbjct: 49  LTIESIDGGIEDLTLSGVKYQMPGIDVDAKKIHLAWRLKCLTSREVCIDDLSTDTVTVNV 108

Query: 115 YLS---SKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII---------------DQES 156
             S       +   +  + ++    + L ++ +    + +                 Q++
Sbjct: 109 DTSQFPPSEEAPPSEPLTELNAPLTIRLNQLALVNTHVNVDGTVIDLDKFATGITWQQKA 168

Query: 157 DQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKA 216
             +     +NL IS       +  +                  +      +    A+   
Sbjct: 169 INIIPTDIINLAISLPVSEEPTVETPVQPVVPQAPIEEQKPLGEELKALFSKPLLAELPE 228

Query: 217 ISLKIQLFPLA-YPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGN 275
           I L + L     +     L G               S      K LN++    K  +SG+
Sbjct: 229 IILPVDLNVEGIHASNFQLKGATDLTINSLNLKLENSGQSVLLKQLNVDAPQGKVAISGS 288

Query: 276 FKISD---------GNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMH 326
             +++         G  R+     Q +  +       + K++ +    +N   +      
Sbjct: 289 ISLAEKWPVALSVIGESRLEDLSGQKLDLSLKGGLLEELKLALNLNGPVNAKLDAQ---T 345

Query: 327 DLNETDFFEEEEKKNKNDD 345
           DL++ DF  E   +++   
Sbjct: 346 DLSQADFPIELTLESQKLT 364


>gi|328907602|gb|EGG27366.1| hypothetical protein PA08_0632 [Propionibacterium sp. P08]
          Length = 248

 Score = 36.4 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 84/260 (32%), Gaps = 35/260 (13%)

Query: 12  LFSVVLVGAFTVPLFIDWTDFRED----FERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67
           L ++V++    V   I    FR              +G   +  G + IH LPF  V   
Sbjct: 17  LVALVVIALLAVVAAIVDQTFRARAEKDIAATIAKSIGANASTVG-VTIHNLPFLGVLVT 75

Query: 68  DIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVSNWFQR 127
           D  +   +    ++ ++       F  +      +     +   +   +S+ G  +W + 
Sbjct: 76  D-ELQGIDTTISKATVDRDDTTVTFRDVDIHANGIRHAREESQAVAETMSATGRIDWSEL 134

Query: 128 KSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKG 187
                           + GG++   D  + +   ++ + +  +   ++I +   + +   
Sbjct: 135 S--------------RLAGGKVTYNDD-TGETGRVAIVTVLGARVDVSITAVPGVKTTSR 179

Query: 188 SVIAEG-TGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPI 246
            V     + + D+                 + LK  L  +     +   GNL +   +  
Sbjct: 180 RVTLSSPSASLDDIPIP------------DVLLKPILDGITSRFTLPDLGNLHYESLKAT 227

Query: 247 YSG-VFSVAGDFSKLLNLEL 265
             G  FS+ G   KL +L  
Sbjct: 228 SQGLDFSLVGTGVKLSDLTG 247


>gi|212703417|ref|ZP_03311545.1| hypothetical protein DESPIG_01461 [Desulfovibrio piger ATCC 29098]
 gi|212673162|gb|EEB33645.1| hypothetical protein DESPIG_01461 [Desulfovibrio piger ATCC 29098]
          Length = 1143

 Score = 36.4 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 59/203 (29%), Gaps = 11/203 (5%)

Query: 168 QISARFLNIISPLSIDSIKGSVIAEGTGNFD-NKRSAFKITANFPAKNKAISLKIQLFPL 226
            +       + PL  D +   +  +  G F     +  K+     A   A+ L+++    
Sbjct: 719 DLPGSLRLHLPPLEKDLLPQGMDLDADGVFSCAGPAGLKLK---KATLSALGLQLKGDLE 775

Query: 227 AYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRIS 286
           A      L      +                +   +L  S    RL      +  ++R+ 
Sbjct: 776 AANGRNGLTWGGTVDLAVRDLKHSLRQIRGSAP-ASLPASLNSLRLKSTASGTPDSLRLK 834

Query: 287 RYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDL 346
             +            D +  V+      L+   + AE   D    + F ++ +       
Sbjct: 835 DLRCSLGW----QQVDGEAAVTWSGTPQLDLRLHAAEFDLDRLLAEMFPDQARSKGRSKA 890

Query: 347 KKD--DIQYSVNKKEEKDNSHDK 367
                D+++  +   +   + D+
Sbjct: 891 PGAPWDLRFMKSFDAQGSLNVDR 913


>gi|27544714|dbj|BAC55052.1| DnaA [Mycobacterium nonchromogenicum]
          Length = 173

 Score = 36.4 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 28/108 (25%), Gaps = 10/108 (9%)

Query: 12  LFSVVLVGAFTVPLFIDWTDF----REDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67
           L  V       VP      +     R       +  +G  I     + + I P P+    
Sbjct: 1   LAIVEGFALLAVPSSFVQNEIERHLRTQITDALSRRLGHPI----ELGVRISPQPAEESP 56

Query: 68  DIRI--DQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113
                    E GS +   E   +  ++    +          D   LN
Sbjct: 57  STATNDSGVEVGSDDEDDETTDVEYDWPNYFTERPSEDSPTADGASLN 104


>gi|313159656|gb|EFR59014.1| hypothetical protein HMPREF9720_0995 [Alistipes sp. HGB5]
          Length = 1527

 Score = 36.4 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 46/152 (30%), Gaps = 12/152 (7%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDW--------TDFREDFERQATLIVGKKIAVKGG 53
           +R+ +  LG + S  ++    +PL +              +   R A+  +   +++   
Sbjct: 1   MRKGIKILGKVLSAAVLLLIILPLALSLLLDIPAVQNYVVQKAVRMASKKLETTVSID-- 58

Query: 54  IKIHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113
            ++ I  F  V  K   + +         +  L      L +  G + +    I    L 
Sbjct: 59  -RVDIGLFSRVKIKGFYV-EDYQRDTLLYVGRLDAFVTGLGIFGGGLSLSRGEIADAKLY 116

Query: 114 FYLSSKGVSNWFQRKSTMDMIHNVILEKIHVK 145
              +  G  N  Q  + +            + 
Sbjct: 117 LRETPGGEMNIKQIVNRISNPDKPKKGNFRLS 148


>gi|291514987|emb|CBK64197.1| Uncharacterized protein conserved in bacteria [Alistipes shahii WAL
           8301]
          Length = 1561

 Score = 36.4 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 56/159 (35%), Gaps = 9/159 (5%)

Query: 1   MLRRVLIGLGFLFSVVLVGAFTVPLFIDW----TDFREDFERQATLIVGKKIAVKGGIKI 56
           ML+++L        V+L+    VP  +         R      A+  +G +++V+   +I
Sbjct: 1   MLKKILKHTLRTLLVILLVLLLVPALLYVPAVQDLARRRAVAYASRTLGMEVSVE---RI 57

Query: 57  HILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYL 116
            +     +   +  +  + D     +   LS+ A   PL+  E+ +    +++   ++  
Sbjct: 58  RLAFPLRLTVDNTLLADRTD--TLLRCGRLSLDAALWPLIRKEVVIRSFALERVAAHYKD 115

Query: 117 SSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQE 155
           +  G+                 L        R+ + D +
Sbjct: 116 TLAGMDLRLAAGELSLEAVRADLSANTAGISRLVLADAD 154


>gi|309972743|gb|ADO95944.1| Hypothetical protein R2846_0505 [Haemophilus influenzae R2846]
          Length = 391

 Score = 36.4 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 44/112 (39%), Gaps = 17/112 (15%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           +++  + +G +F  +        L+I     +     Q        IAV+  I + +   
Sbjct: 1   MKKFALIIGIVFLAIF-----SFLYIQLYRVQSAINEQLAQQ---NIAVQ-SINLSLF-S 50

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLN 113
           P++  ++++       + +   + +  +  FLPLL G   +  + I Q  L 
Sbjct: 51  PALSLENLK-------TTQFSAQKIEAKFSFLPLLYGNAALHSLNIQQLKLT 95


>gi|170761838|ref|YP_001785457.1| germination protein YpeB [Clostridium botulinum A3 str. Loch Maree]
 gi|169408827|gb|ACA57238.1| germination protein YpeB [Clostridium botulinum A3 str. Loch Maree]
          Length = 456

 Score = 36.4 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 32/281 (11%), Positives = 82/281 (29%), Gaps = 17/281 (6%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           RR+L  L     VV    F + + ++  D+R   + + +  + + I     I++++    
Sbjct: 6   RRILYTLIVTLIVVFSSTFAILMTLERNDYRNYLQGEYSKSLHELITSVQNIRVNL---- 61

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
                   I    D       E +   +         + +    I              +
Sbjct: 62  ----SKASIIGSRD-QEIVTFEEIFKYSSMANDKLHSLPIDQNTIANTSKFLSQVGDFSN 116

Query: 123 NWFQRKSTMDMIHNVILEKI-HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           +  +     + +     E I  +K   +++ +Q ++ V  +++  ++       +   L 
Sbjct: 117 SLGKSIVKNNDLSKKDYENIERLKKESLQLENQLNNVVTDINEGRVKWGDIRKKVGGVL- 175

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
             + +     +G  N   K+        +       +LKI     +    I         
Sbjct: 176 --AKENPNSVKGQFNNMQKQVMQYPALIYDGPFSDNTLKITPKVNSEK-NISQN---QAQ 229

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGN 282
           +      G   +         ++ +    R   + K  D  
Sbjct: 230 KMAENIIGKDKIKSIKLDTNEVKTNIGTYRFIADIKGRDNK 270


>gi|315656624|ref|ZP_07909511.1| serine/threonine kinase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315492579|gb|EFU82183.1| serine/threonine kinase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 663

 Score = 36.4 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 77/269 (28%), Gaps = 37/269 (13%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFRED---FERQATLI----VGKKIAVKGGIK 55
           R  LIG      V+L    T         +R       +Q +          +  +   +
Sbjct: 373 RWFLIGGIIGAIVLLAAILTWFFMWGPGSYRPMVDVVNQQWSDASKSLTAADVTFE---R 429

Query: 56  IHILPFPSVFFKDIRIDQKEDGSFESKIEGLSMRAE------FLPLLSGEIRVFDMYIDQ 109
           + +    +V   ++       G    + +   +          +P L+G+ +   + + +
Sbjct: 430 VDVFDD-NVPAGNVARTDPAPGKPLGRFQTAKIFVSKGVEMLTMPDLTGKTQEEALELVK 488

Query: 110 ------PHLNFYLS---SKGVSNWFQRKSTMDMIHNVILEKIHVKGGR--IKIID----Q 154
                 P ++        +G  +  Q  +    + +  + K+ V  GR  + ++D     
Sbjct: 489 KARFNAPQVSEEFHDTVPEGQVS-AQDPAPNASVPHNTIVKVMVSKGRQPVTMLDLVGKP 547

Query: 155 ESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGTG-NFDNKRSAFKIT---ANF 210
            S+    L+ + LQ   +            I  SV    T    D            A  
Sbjct: 548 GSEAQSELTKVGLQPQVKEEFSDGVPKGKVISQSVAPNTTLHRLDQVTLVVSKGPEMAAV 607

Query: 211 PAKNKAISLKIQLFPLAYPIIIDLFGNLF 239
           P        + +    +    +++     
Sbjct: 608 PNVFGKSEGEARSALESAGFTVNVKRTFG 636


>gi|304396930|ref|ZP_07378810.1| protein of unknown function DUF490 [Pantoea sp. aB]
 gi|304355726|gb|EFM20093.1| protein of unknown function DUF490 [Pantoea sp. aB]
          Length = 1255

 Score = 36.4 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 94/305 (30%), Gaps = 29/305 (9%)

Query: 19  GAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPSVFFKDIRIDQKEDGS 78
             F  PL     DFR   +     I+G+++ V G           +    + +  K    
Sbjct: 213 AMFAQPLLPALPDFRLPLDIDVQQILGEQLRVTGDTD--------IAVSRLLLKAKTADR 264

Query: 79  FESKIEGLSMRAEFLPLL-SGEIRVFDMYIDQPHLNFYLSSK---GVSNWFQRKSTMDMI 134
              ++  L + +    L  SG+  + D +     LN  +++    G     +    M   
Sbjct: 265 QM-QLTTLEVDSNLGNLKGSGQATLADNWPVDFSLNGTVNTDPIKGEKLALKLNGAMRDA 323

Query: 135 HNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSVIAEGT 194
             + L        ++   D  +        L+LQ+++  L       I     ++  +  
Sbjct: 324 LKLGLNLSGPVNAQL---DATTQLAVAGLPLSLQLTSPQLRWPLTGPIQYQADNLDYQFK 380

Query: 195 GNFDNKRSAFKI-----TANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW-----NEKQ 244
           G   +   + +      +      +      ++ F L    +  L GN+         K 
Sbjct: 381 GKATDYVMSLQTAVKGESVPPANVSLTGKGNVEQFSLDRLRVAALQGNIDLTALVDWSKA 440

Query: 245 PIYSGVFSVAGDFSKLLNLELSA---KKSRLSGNFKISDGNVRISRYKLQSILPNSSTDE 301
             +    ++AG  +     +  A    K    G+       + + + +L+  +  ++   
Sbjct: 441 ISWRSELTLAGINTAKQYPDWPARLDGKITTRGSLYGGTWQLSVPQLQLKGNVKKNAVTA 500

Query: 302 DNKTK 306
           D    
Sbjct: 501 DGSLT 505


>gi|296392799|ref|YP_003657683.1| ABC transporter [Segniliparus rotundus DSM 44985]
 gi|296179946|gb|ADG96852.1| ABC transporter related protein [Segniliparus rotundus DSM 44985]
          Length = 605

 Score = 36.4 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 29/269 (10%), Positives = 73/269 (27%), Gaps = 27/269 (10%)

Query: 17  LVGAFTVPLFIDWT---------DFREDFERQATLI--VGKKIAVKGGIKIHILPFP--- 62
           LV A ++ ++++W          D              + + ++V   I+   LP P   
Sbjct: 286 LVAAISLVMYLNWPLTSIALLLGDLFSTVNAAVRHWELMDRPVSVTDPIRPRALPQPVRG 345

Query: 63  SVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGVS 122
            + F+ +     +  +       L +R   +  L G        +          + G  
Sbjct: 346 ELAFEHVGFTYPDAKAPVLTDVSLQLRPGEILALVGPTGSGKSTLANLVPRLLDVTSGRI 405

Query: 123 NWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDL--NLQISARFLNIISPL 180
                      +  V + ++ +   R +I     + V F + +  N+ +        +  
Sbjct: 406 ----------TLDGVDIRELRLADLRAQIAVAFEEPVLFSASVRENVALGQPDATDGAVA 455

Query: 181 SIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFW 240
               I  +        +    +         +  +   L +    L  P ++ L   L  
Sbjct: 456 DALEIASAAEFVAKLPW-GASTRVGEQGLSLSGGQRQRLALARSVLGQPKVLVLDDPLSA 514

Query: 241 NEKQPIYSGVFSVAGDFSKLLNLELSAKK 269
            +          +          + +A  
Sbjct: 515 LDVDTEAQVQAKLRRAVQDSEGAQGAAAP 543


>gi|27544728|dbj|BAC55059.1| DnaA [Mycobacterium terrae]
          Length = 174

 Score = 36.4 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 25/112 (22%), Gaps = 17/112 (15%)

Query: 12  LFSVVLVGAFTVPLFIDWTDF----REDFERQATLIVGKKIAVKGGIKIHILPFPSVFFK 67
           L  V       VP      +     R       +  +G  I     + + I P P     
Sbjct: 1   LAIVEGFALLAVPSSFVQNEIERHLRTQITAALSRRLGHDI----ELGVRIAPAP---AD 53

Query: 68  DIRIDQKEDGSFESKIEGL------SMRAEFLPLLSGEIRVFDMYIDQPHLN 113
           D            +  +         +  ++    +          D   LN
Sbjct: 54  DGSASSDNPAPARAGEDEDDEDDTPDVEYDWPNYFTERPSDDSATADGASLN 105


>gi|169615719|ref|XP_001801275.1| hypothetical protein SNOG_11023 [Phaeosphaeria nodorum SN15]
 gi|160703029|gb|EAT81522.2| hypothetical protein SNOG_11023 [Phaeosphaeria nodorum SN15]
          Length = 628

 Score = 36.4 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 24/238 (10%), Positives = 56/238 (23%), Gaps = 18/238 (7%)

Query: 26  FIDWTDFREDFERQATLIVGKKIAVK-GGIKIHILPFPSVFFKDIRIDQ----KEDGSFE 80
           F D+   R++  R+     G+   +    I + I     +    + +             
Sbjct: 52  FFDFNKIRDEIVRETDAKTGRNAGISPAPINLRIYSPNVLTLTLVDLPGLTKVPVGDQPR 111

Query: 81  SKIEGLSMRAEFLPLLSGEIRVFDMYI--------DQPHLNFYLSSKGVSNWFQRKSTMD 132
             IE          +      +  +          D   L   +  +G            
Sbjct: 112 -DIERQIREMVLKQISKSNAIILAVTAANTDLANSDGLQLAREVDPEGQRTIGVLTKVDL 170

Query: 133 MIHNVILEKI---HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSIKGSV 189
           M     +  I    +   R+  +   +     + +      A         +  + +   
Sbjct: 171 MDQGTDVVDILAGRIIPLRLGYVPVVNRGQRDIENKKAISYALEHEKQFFENHKAYRNKA 230

Query: 190 IAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIY 247
              GT  +  ++    +  +       I  +I      Y   +   GN        I 
Sbjct: 231 AYCGT-PYLARKLNLILMMHIKQTLPDIKARIASSLQKYQAELASLGNSMLGNSSNIV 287


>gi|220917820|ref|YP_002493124.1| glycosyl transferase family 51 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219955674|gb|ACL66058.1| glycosyl transferase family 51 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 656

 Score = 36.4 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 36/372 (9%), Positives = 82/372 (22%), Gaps = 74/372 (19%)

Query: 3   RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFP 62
           R    G+  L  +  V    +         R   E                    IL   
Sbjct: 20  RAAGWGVLALACLYGVALVALS--------RPAAEAALRR--------------RILAGL 57

Query: 63  SVFFKDIRI--------------------DQKEDGSFESKIEGLSMRAEFLPLLSGEIRV 102
                D+ +                      +       ++E +  R   L LL+G   +
Sbjct: 58  RASVGDVTLGPDVHVSPLLRVSFGPLAIAGARPGAPPVLRVERIEARPRLLALLAGRAEL 117

Query: 103 FDMYIDQPHLNFYLSSKGVSNWFQRKSTMDMIHNVILEKI-------------------- 142
             + +    +       G S     +                                  
Sbjct: 118 ASVRMTG--VRVEAGRSGRSLLELGERLRGPPARRGALPARAPAASAPEPAPEADEAAPW 175

Query: 143 -HVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLSIDSI---KGSVIAEGTGNFD 198
             V+   + I      +   L  ++  +S    +    L  D      G+   +      
Sbjct: 176 PSVQARALVIAFVLGGKTVELGPIDAHLSRARGDGEERLRADLRLPGGGTATVDARREAS 235

Query: 199 NKRSAFKIT----ANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVA 254
             R+   +     A  P    A ++ ++   L+    +D   +L     + + +     +
Sbjct: 236 GWRATLGVRHLGPAAIPEALGAGAVSLREGTLSLDATLDAAPDLSRLGGRAVLAVE-GAS 294

Query: 255 GDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENL 314
               ++    L    +   G+        R+S      ++   +       +        
Sbjct: 295 VAGERIGAEPLGPISATAEGDVAWEGAERRVS-LSGGRVVLFGAIPAAVSGQARLGPGLP 353

Query: 315 LNFSENGAESMH 326
              S        
Sbjct: 354 FELSARLDRLDF 365


>gi|109947912|ref|YP_665140.1| penicillin-binding protein [Helicobacter acinonychis str. Sheeba]
 gi|109715133|emb|CAK00141.1| penicillin-binding protein [Helicobacter acinonychis str. Sheeba]
          Length = 659

 Score = 36.4 bits (82), Expect = 8.3,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 9/68 (13%)

Query: 1  MLRRVLIGLGFLFSVV--LVGAFTVPLFIDWT-------DFREDFERQATLIVGKKIAVK 51
          ML+++  GLG L  +V  L+      ++++         D+R     Q     G+ IA  
Sbjct: 1  MLKKIFYGLGVLVLIVMGLLAILIAQVWVNTDKDIAKIKDYRPSVASQILDRKGRLIANI 60

Query: 52 GGIKIHIL 59
             +    
Sbjct: 61 YDKEFRFY 68


>gi|229490187|ref|ZP_04384034.1| putative secreted protein [Rhodococcus erythropolis SK121]
 gi|229322935|gb|EEN88709.1| putative secreted protein [Rhodococcus erythropolis SK121]
          Length = 256

 Score = 36.4 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 33/104 (31%), Gaps = 13/104 (12%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           RVLI L  + +V++       L++     +     Q    +G ++     + +   P   
Sbjct: 13  RVLIILLVVIAVLVAALVGGELYVR-NQVKTCMADQFQSELGSQV----DVGLSWKP--- 64

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                + +   +       I+           +    +V D+ +
Sbjct: 65  -----VLLQAVDKKVPYISIDSDDSSFGPATGMQVHAKVNDINL 103


>gi|73666752|ref|YP_302768.1| hypothetical protein Ecaj_0119 [Ehrlichia canis str. Jake]
 gi|72393893|gb|AAZ68170.1| hypothetical protein Ecaj_0119 [Ehrlichia canis str. Jake]
          Length = 881

 Score = 36.4 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 50/383 (13%), Positives = 117/383 (30%), Gaps = 32/383 (8%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTD-FREDFERQATLIVGKKIAVKGGIKIHI-LPF 61
           R+LI  G +   +L+     P FI+W   +     +Q   I    + VKG   +   L  
Sbjct: 2   RILIYSGGIILTLLLFLIISPFFINWNSYYASHILKQIEDISDY-VTVKGVGSVTGKLIL 60

Query: 62  PSVFFKDIRIDQKEDGSFE---SKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSS 118
           P +   ++ I+     S       +  L ++   L LL    +V  + +D   +      
Sbjct: 61  PKIIVNNLYIEGHGKLSTHKSTILVNQLELKISLLSLLLFSPKVNTITVDGLSIPL---- 116

Query: 119 KGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKII-DQESDQVYFLSDLNLQISARFLNII 177
                      +     +  +   ++    +    D  S     +S     I       +
Sbjct: 117 ----GNLVSLFSSFQGKSFNINTFNIVNSVVNTDYDGTSFNSKPISIKEGSIKTINGAKV 172

Query: 178 SPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGN 237
               +   K      G  + +   +         +    +S           ++ +    
Sbjct: 173 INGLLSIGKNDYNLVGDVSVNEDHNKINANVYSQSTKVTLSGVASGNKFDGVVLANGTDF 232

Query: 238 LFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSILPNS 297
             +       +         + + +   S ++  LS N K+S  +  ++  K+ +   + 
Sbjct: 233 SQFINDISETN--------KTSIFSFINSNEEFSLSANLKLSGQSFELNDLKVSTDSIDG 284

Query: 298 ------STDEDNKTKVSQDEENLLNFSENGAESMHDLNET---DFFEEEEKKNKNDDLKK 348
                 S+       V   + N+ + S +   S     E+   D+F     +N +  +K 
Sbjct: 285 IGKIVCSSYASCDASVDFSKINIDHLSGSNNGSDAYSKESRTLDYFNTLISENLDYKVKI 344

Query: 349 DDIQYSVNKKEEKDNSHDKENQE 371
              +   + +   + + D E  +
Sbjct: 345 SAKEIKYHDEVSSNLALDFEVLK 367


>gi|321313849|ref|YP_004206136.1| hypothetical protein BSn5_12475 [Bacillus subtilis BSn5]
 gi|320020123|gb|ADV95109.1| hypothetical protein BSn5_12475 [Bacillus subtilis BSn5]
          Length = 483

 Score = 36.0 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 30/265 (11%), Positives = 78/265 (29%), Gaps = 22/265 (8%)

Query: 111 HLNFYLSSKGVSNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQIS 170
            +   ++S      F+ + T  +   V +  I      + +          L  L     
Sbjct: 225 KITVPVTSPSKKVPFKIERTGSLPDGVSIANIESSPSEVTVY----GSQDVLDSLEFIDG 280

Query: 171 ARFLNIISPLSIDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQ-------- 222
                       D      + +G       +    I  +  A  K  ++ I+        
Sbjct: 281 VSLDLSKINKDSDIEADIPLPDGVKKISPSKVTLHIEVDSEADQKFENVPIKTVGLSSSQ 340

Query: 223 ----LFPLAYPIIIDLFGNLFWNEKQPIYSGVFSVAGDFSKLLNLELSAKKS---RLSGN 275
               L P +  I +   G+     K         V     +     +  + +    ++ +
Sbjct: 341 NIEFLDPESQAIDVTAKGSPTNINKLKKSDIELYVNVSDLEDGEHSVKLEVNGPQNVTWS 400

Query: 276 FKISDGNVRISRYKLQSILPNSSTDEDNKTKVSQDEENLLNFSENGAESMHDLNETDFFE 335
               +  ++++  K  +   ++S++       +  + N    ++       D N  D  +
Sbjct: 401 LGRKNAKIKLTSKKSNTSTNDNSSNTSGNQDHTDKQTNDQKNNQQEDTKNTDKNSNDQNQ 460

Query: 336 EEEKKNKNDDLKKDDIQYSVNKKEE 360
           +E   NK+ +  +D+ + + N    
Sbjct: 461 DE---NKDQNQDQDEDESTANSSSS 482


>gi|21492832|ref|NP_659907.1| sugar ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|190894114|ref|YP_001984408.1| sugar ABC transporter, permease protein [Rhizobium etli CIAT 652]
 gi|21467257|gb|AAM54920.1| sugar ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|190699775|gb|ACE93858.1| sugar ABC transporter, permease protein [Rhizobium etli CIAT 652]
 gi|327193505|gb|EGE60399.1| sugar ABC transporter, permease protein [Rhizobium etli CNPAF512]
          Length = 313

 Score = 36.0 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 5  VLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFER---QATLIVGKKIAV-KGGIKIHILP 60
          + + +G L  +V+     +P F+D  +      +        +G+   +  GG+ + +  
Sbjct: 17 IGLSIGTLLVMVVASVILLPDFMDPENLSNLLAQSTVLVISALGQTFVILTGGLDVSVGS 76

Query: 61 FPSVFFKDIRIDQKE 75
            S+    + +D  E
Sbjct: 77 VISLTTTIMTLDLPE 91


>gi|223040100|ref|ZP_03610380.1| tryptophanyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878577|gb|EEF13678.1| tryptophanyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 861

 Score = 36.0 bits (81), Expect = 9.5,   Method: Composition-based stats.
 Identities = 40/351 (11%), Positives = 92/351 (26%), Gaps = 21/351 (5%)

Query: 2   LRRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPF 61
           ++ +   LG +F++++               R   +       G  +      K  I P 
Sbjct: 1   MKILGALLGLVFALIIAAYVAAFTDFGNGLVRPYAQNLIKEKSGFDVKFD---KFQIRPT 57

Query: 62  PSVFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYIDQPHLNFYLSSKGV 121
                  I I    +    + + G          L  ++ V D+      LN  +   GV
Sbjct: 58  ------SIDIVANINDEIAANVNGGLSIFSQSLDLKYDVAVSDLKSLGVKLNEAMKISGV 111

Query: 122 SNWFQRKSTMDMIHNVILEKIHVKGGRIKIIDQESDQVYFLSDLNLQISARFLNIISPLS 181
           +       T   +  +        G  +       D       L+ +       +     
Sbjct: 112 AKGEFSDFTASGVGQM-------LGSNVSFDANLKDYKPLSLKLDAKNLQVEKALALAGQ 164

Query: 182 IDSIKGSVIAEGTGNFDNKRSAFKITANFPAKNKAISLKIQLFPLAYPIIIDLFGNLFWN 241
                G + A         +       +        +L  + F +  P      G +   
Sbjct: 165 PIYAHGKISAVANIVESGGKPNGTANIDILDVKTDNALIAKDFNITLPPNFAANGKIAAE 224

Query: 242 EKQPIYSGVFSVAGDFSKLLNLELSAKKSRLSGNFKISDGNVRISRYKLQSIL-PNSSTD 300
            K  I S   +V    + + + +     +  + +  +      +S+++       + +  
Sbjct: 225 IKDGIVSAKSAVITPLATIGSDKTIYDLNSNTLSSDVKLIVDDLSKFEPVVGQKLSGAFK 284

Query: 301 EDNKTKVSQDEENLLNFSENGAESMHDLNETDFFEEEEKKNKNDDLKKDDI 351
            +     +  E    +    G     D          +   K   LK D++
Sbjct: 285 ANGNVIATAGELKNFDVKIEGFGGNVD----AVLNGGKLIAKISSLKLDEL 331


>gi|226305083|ref|YP_002765041.1| hypothetical protein RER_15940 [Rhodococcus erythropolis PR4]
 gi|226184198|dbj|BAH32302.1| hypothetical protein RER_15940 [Rhodococcus erythropolis PR4]
          Length = 272

 Score = 36.0 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 12/104 (11%), Positives = 33/104 (31%), Gaps = 13/104 (12%)

Query: 4   RVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGGIKIHILPFPS 63
           RVL+ L  + +V++       L++     +     Q    +G ++     + +   P   
Sbjct: 29  RVLVILLVVIAVLVAALVGGELYVR-NQVKTCMADQFQSELGSQV----DVGLSWKP--- 80

Query: 64  VFFKDIRIDQKEDGSFESKIEGLSMRAEFLPLLSGEIRVFDMYI 107
                + +   +       I+           +    +V D+ +
Sbjct: 81  -----VLLQAVDKKVPYISIDSDDSSFGPATGMQVHAKVNDINL 119


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.307    0.116    0.238 

Lambda     K      H
   0.267   0.0358    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 959,383,247
Number of Sequences: 14124377
Number of extensions: 21668207
Number of successful extensions: 202240
Number of sequences better than 10.0: 2869
Number of HSP's better than 10.0 without gapping: 1386
Number of HSP's successfully gapped in prelim test: 1483
Number of HSP's that attempted gapping in prelim test: 198656
Number of HSP's gapped (non-prelim): 3423
length of query: 380
length of database: 4,842,793,630
effective HSP length: 141
effective length of query: 239
effective length of database: 2,851,256,473
effective search space: 681450297047
effective search space used: 681450297047
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 81 (36.0 bits)