HHsearch alignment for GI: 254780955 and conserved domain: PRK11798

Probab=98.01  E-value=0.00018  Score=49.87  Aligned_cols=94  Identities=15%  Similarity=0.274  Sum_probs=78.4

Q ss_pred             HHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCEEEEEEEEE---ECCEEECCCEEEEEEEECCEEEEE
Q ss_conf             99999999997089998746999984588887759899963975379984311---218076454799999849876689
Q gi|254780955|r   43 LVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQ---FWDLKVLDNHFEVGLSFSNVPERL  119 (204)
Q Consensus        43 Vvr~~L~~v~~~g~LpG~hHfyItF~T~~~gV~ip~~L~~~yP~emTIVlQhq---f~dL~V~~~~FsV~LsF~g~~e~L  119 (204)
T Consensus        11 LiRA~yeW~~Dn~~-----TPyi~V~a~~~~v~VP~~~v----~dg~IvLNIsp~Av~~L~i~nd~isF~ARF~G~~~~i   81 (140)
T PRK11798         11 LLRALYEWLVDNGL-----TPHLLVDATYPGVQVPMEYV----KDGQIVLNISPRAVGNLQLDNDAISFNARFGGVPRQI   81 (140)
T ss_pred             HHHHHHHHHHHCCC-----CCEEEEEECCCCCCCCHHHC----CCCEEEEECCHHHHHCEEECCCEEEEEEEECCEEEEE
T ss_conf             89999999972899-----85499981799966898880----1998999779888603077587899987979915899


Q ss_pred             EEEHHHHEEEECCCCCEEEEECCCCC
Q ss_conf             98442420230677530356034676
Q gi|254780955|r  120 VIPFNAIKGFYDPSVNFELEFDVHIE  145 (204)
Q Consensus       120 ~IPf~AIt~F~DPSV~FgLqF~~~~~  145 (204)
T Consensus        82 ~vP~~aV~aIyArEnG~Gm~F~~E~~  107 (140)
T PRK11798         82 YVPIAAVLAIYARENGQGMMFEPEAA  107 (140)
T ss_pred             EEEHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             97789964253010378754488766