HHsearch alignment of GI: 254780955 and MMDB domain: 1yfn_A_
>1yfn_A (A:) Stringent starvation protein B; protein-peptide complex, SSPB, RSEA, protein binding; 1.80A {Escherichia coli}
Probab=99.94 E-value=6.9e-28 Score=201.64 Aligned_cols=99 Identities=15% Similarity=0.255 Sum_probs=89.1
Q ss_pred HHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCEEEEEE---EEEECCEEECCCEEEEEEEECCEEEEEEE
Q ss_conf 999999997089998746999984588887759899963975379984---31121807645479999984987668998
Q gi|254780955|r 45 KVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVI---QNQFWDLKVLDNHFEVGLSFSNVPERLVI 121 (204)
Q Consensus 45 r~~L~~v~~~g~LpG~hHfyItF~T~~~gV~ip~~L~~~yP~emTIVl---Qhqf~dL~V~~~~FsV~LsF~g~~e~L~I 121 (204)
--.|+-+.+.+ |+|+|||||+|+|++|||++|+ +||++||||| |||||||.|++++||++|+|||+|+.|+|
T Consensus 11 pyllra~~~w~-ld~~~tpyI~v~~~~~gV~vP~----~y~~~~~IVLnis~~a~~~L~i~~d~isf~~rF~G~~~~i~V 85 (118)
T 1yfn_A 11 PYLLRAFYEWL-LDNQLTPHLVVDVTLPGVQVPM----EYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSV 85 (118)
T ss_dssp HHHHHHHHHHH-HHTTCCEEEEEETTSTTCBSCG----GGCBTTEEEEECSGGGCEEEEECSSEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHH-HHCCCCCEEEEEECCCCCCCCH----HHCCCCEEEEECCHHCCCCEEECCCEEEEEEEECCEEEEEEE
T ss_conf 18899999999-8789985799994899976897----990698399985821127868806889999998992189998
Q ss_pred EHHHHEEEECCCCCEEEEECCCCCCCC
Q ss_conf 442420230677530356034676654
Q gi|254780955|r 122 PFNAIKGFYDPSVNFELEFDVHIEHIE 148 (204)
Q Consensus 122 Pf~AIt~F~DPSV~FgLqF~~~~~~~~ 148 (204)
||+||++|+||+++|||+|+...+.++
T Consensus 86 P~~AI~~i~~~e~g~Gm~F~~~~~~~~ 112 (118)
T 1yfn_A 86 PLAAVLAIYARENGAGTMFEPEAAYDE 112 (118)
T ss_dssp EGGGEEEEEETTTCCEEECCCCTTTC-
T ss_pred EHHHHHEHEECCCCCCEECCCCCCCCC
T ss_conf 679952230114588613598777888