HHsearch results for GI: 254780955 and protein with PDBid: 1yfn_A
>1yfn_A Stringent starvation protein B; protein-peptide complex, SSPB, RSEA, protein binding; 1.80A {Escherichia coli} SCOP: b.136.1.1 PDB: 1ox9_A 1ox8_A
Probab=98.44 E-value=2.7e-06 Score=60.40 Aligned_cols=94 Identities=12% Similarity=0.252 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCEEEEEEEEEE-CCEEECCCEEEEEEEECCEEEEEEE
Q ss_conf 999999999970899987469999845888877598999639753799843112-1807645479999984987668998
Q gi|254780955|r 43 LVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQF-WDLKVLDNHFEVGLSFSNVPERLVI 121 (204)
Q Consensus 43 Vvr~~L~~v~~~g~LpG~hHfyItF~T~~~gV~ip~~L~~~yP~emTIVlQhqf-~dL~V~~~~FsV~LsF~g~~e~L~I 121 (204)
++|....=+..+|+ -=||.-.+.++||.+|....+ -.+|+.-|-.+. .||.++++..+-...|+|++..+.|
T Consensus 13 LiRA~y~W~~Dn~~-----TPyl~Vda~~~~v~VP~~~v~--dg~IvLNIsp~Av~~L~i~nd~IsF~aRF~G~~~~i~v 85 (118)
T 1yfn_A 13 LLRAFYEWLLDNQL-----TPHLVVDVTLPGVQVPMEYAR--DGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSV 85 (118)
T ss_dssp HHHHHHHHHHHTTC-----CEEEEEETTSTTCBSCGGGCB--TTEEEEECSGGGCEEEEECSSEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHCCC-----CCEEEEEECCCCCCCCHHHCC--CCEEEEECCCCCCCCEEEECCEEEEEEEECCCCEEEEE
T ss_conf 79999999976899-----757999938999788978913--98699985820311679837799999998991189998
Q ss_pred EHHHHEEEECCCCCEEEEECCC
Q ss_conf 4424202306775303560346
Q gi|254780955|r 122 PFNAIKGFYDPSVNFELEFDVH 143 (204)
Q Consensus 122 Pf~AIt~F~DPSV~FgLqF~~~ 143 (204)
|+.||.+-+....+-|+-|+..
T Consensus 86 P~~AV~aIyarEnG~Gm~F~~e 107 (118)
T 1yfn_A 86 PLAAVLAIYARENGAGTMFEPE 107 (118)
T ss_dssp EGGGEEEEEETTTCCEEECCCC
T ss_pred EHHHHHHHEECCCCCCEECCCC
T ss_conf 6799522301145886134988