HHsearch results for GI: 254780955 and protein with PDBid: 1yfn_A

>1yfn_A Stringent starvation protein B; protein-peptide complex, SSPB, RSEA, protein binding; 1.80A {Escherichia coli} SCOP: b.136.1.1 PDB: 1ox9_A 1ox8_A
Probab=98.44  E-value=2.7e-06  Score=60.40  Aligned_cols=94  Identities=12%  Similarity=0.252  Sum_probs=79.3

Q ss_pred             HHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCEEEEEEEEEE-CCEEECCCEEEEEEEECCEEEEEEE
Q ss_conf             999999999970899987469999845888877598999639753799843112-1807645479999984987668998
Q gi|254780955|r   43 LVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQF-WDLKVLDNHFEVGLSFSNVPERLVI  121 (204)
Q Consensus        43 Vvr~~L~~v~~~g~LpG~hHfyItF~T~~~gV~ip~~L~~~yP~emTIVlQhqf-~dL~V~~~~FsV~LsF~g~~e~L~I  121 (204)
                      ++|....=+..+|+     -=||.-.+.++||.+|....+  -.+|+.-|-.+. .||.++++..+-...|+|++..+.|
T Consensus        13 LiRA~y~W~~Dn~~-----TPyl~Vda~~~~v~VP~~~v~--dg~IvLNIsp~Av~~L~i~nd~IsF~aRF~G~~~~i~v   85 (118)
T 1yfn_A           13 LLRAFYEWLLDNQL-----TPHLVVDVTLPGVQVPMEYAR--DGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSV   85 (118)
T ss_dssp             HHHHHHHHHHHTTC-----CEEEEEETTSTTCBSCGGGCB--TTEEEEECSGGGCEEEEECSSEEEEEEEETTEEEEEEE
T ss_pred             HHHHHHHHHHHCCC-----CCEEEEEECCCCCCCCHHHCC--CCEEEEECCCCCCCCEEEECCEEEEEEEECCCCEEEEE
T ss_conf             79999999976899-----757999938999788978913--98699985820311679837799999998991189998


Q ss_pred             EHHHHEEEECCCCCEEEEECCC
Q ss_conf             4424202306775303560346
Q gi|254780955|r  122 PFNAIKGFYDPSVNFELEFDVH  143 (204)
Q Consensus       122 Pf~AIt~F~DPSV~FgLqF~~~  143 (204)
                      |+.||.+-+....+-|+-|+..
T Consensus        86 P~~AV~aIyarEnG~Gm~F~~e  107 (118)
T 1yfn_A           86 PLAAVLAIYARENGAGTMFEPE  107 (118)
T ss_dssp             EGGGEEEEEETTTCCEEECCCC
T ss_pred             EHHHHHHHEECCCCCCEECCCC
T ss_conf             6799522301145886134988