HHsearch results for GI: 254780955 and protein with PDBid: 2nys_A
>2nys_A AGR_C_3712P; SSPB, stringent starvation protein B, NESG, ATR88, structural genomics, PSI-2, protein structure initiative; 2.70A {Agrobacterium tumefaciens str} SCOP: b.136.1.2
Probab=100.00 E-value=0 Score=430.82 Aligned_cols=167 Identities=59% Similarity=0.958 Sum_probs=140.7
Q ss_pred CHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCEEEEEEEEEECCEEECCC
Q ss_conf 02210498999999999999999999997089998746999984588887759899963975379984311218076454
Q gi|254780955|r 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDN 104 (204)
Q Consensus 25 M~~Dli~Y~~l~~~Alr~Vvr~~L~~v~~~g~LpG~hHfyItF~T~~~gV~ip~~L~~~yP~emTIVlQhqf~dL~V~~~ 104 (204)
|++|+|+|++|+++|||||||++|+.|+++|+|||+|||||||+|++|||+||+||+++||+|||||||||||||.|+++
T Consensus 1 m~~d~i~Y~~l~~~alr~vvr~~L~~v~~~G~lpg~hHfYItf~t~~pGV~vP~~l~~~yp~emtiVlq~qf~dL~V~~d 80 (176)
T 2nys_A 1 MGQDHIRYDILAQDALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHLKSKYAEQMTIVIQHQFWDMKVTET 80 (176)
T ss_dssp --CCSSCHHHHHHHHHHHHHHHHHHHHHHHSSCCTTCCEEEEEESSSTTCBCCHHHHHHSSSEEEEEESSSCEEEEECSS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHCCCCCEEEECHHHHCCEEEECC
T ss_conf 98450479999999999999999999998297998866999997699995889999862984148964555359088546
Q ss_pred EEEEEEEECCEEEEEEEEHHHHEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 79999984987668998442420230677530356034676654334445654444456556643344444445556655
Q gi|254780955|r 105 HFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKST 184 (204)
Q Consensus 105 ~FsV~LsF~g~~e~L~IPf~AIt~F~DPSV~FgLqF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (204)
+|||+|||||+|++|+|||+||++|+||||+|||+|+.....+.+..+..... ...........++.
T Consensus 81 ~fsf~lrF~Gvp~~l~IP~~AI~af~dpevgfGL~F~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~ 147 (176)
T 2nys_A 81 GFEIGLSFSDTPEKLVIPYNAIRGFYDPSVNFELEFDVPLAKEEEMEEAEITA-------------YPVSHEAKPASETP 147 (176)
T ss_dssp EEEEEEEETTEEEEEEEEGGGEEEEEEGGGTEEEECCCC-----------------------------------------
T ss_pred EEEEEEEECCEEEEEEEEHHHEEEEECCCCCCCEECCCCCCCCCCCCCCCCCC-------------CCCCCCCCCCCCCC
T ss_conf 58999998996079998757801656767786223288665444445566667-------------77764456777788
Q ss_pred CCCCCCCCCCEEEEEECCCC
Q ss_conf 56665677728983100269
Q gi|254780955|r 185 KKQNKNKMASVISLDNFRKK 204 (204)
Q Consensus 185 ~~~~~~~~aeVVSLD~FRKK 204 (204)
++..++++++|||||+||||
T Consensus 148 ~~~~~k~~~~VVsld~frkK 167 (176)
T 2nys_A 148 KSGEEKKEGSVVSLDAFRKK 167 (176)
T ss_dssp --------------------
T ss_pred CCCCCCCCCCEEEECCCCCC
T ss_conf 88777888988970310268