BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780955|ref|YP_003065368.1| hypothetical protein
CLIBASIA_04270 [Candidatus Liberibacter asiaticus str. psy62]
(204 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780955|ref|YP_003065368.1| hypothetical protein CLIBASIA_04270 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040632|gb|ACT57428.1| hypothetical protein CLIBASIA_04270 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 204
Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/204 (100%), Positives = 204/204 (100%)
Query: 1 MVSLWNFFSSRWQWFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGE 60
MVSLWNFFSSRWQWFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGE
Sbjct: 1 MVSLWNFFSSRWQWFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGE 60
Query: 61 HHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLV 120
HHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLV
Sbjct: 61 HHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLV 120
Query: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK
Sbjct: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
Query: 181 KKSTKKQNKNKMASVISLDNFRKK 204
KKSTKKQNKNKMASVISLDNFRKK
Sbjct: 181 KKSTKKQNKNKMASVISLDNFRKK 204
>gi|315122503|ref|YP_004062992.1| hypothetical protein CKC_03775 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495905|gb|ADR52504.1| hypothetical protein CKC_03775 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 172
Score = 243 bits (621), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 120/165 (72%), Positives = 136/165 (82%), Gaps = 1/165 (0%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
MN+DHIRYDIL KEALRGLVK VL+E A+IGSLPG+HHFYITFATNARGVRISQN++K Y
Sbjct: 1 MNHDHIRYDILTKEALRGLVKTVLAETAAIGSLPGDHHFYITFATNARGVRISQNIKKIY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PEK+TIVIQNQFWDLKV DNHFEVGLSFSNVPE L IPFNAI+GFYDPSVNFELEFDVH+
Sbjct: 61 PEKITIVIQNQFWDLKVFDNHFEVGLSFSNVPELLSIPFNAIQGFYDPSVNFELEFDVHL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK 189
EE+LE G+VL P+NF+K+Q+ + KKQ K
Sbjct: 121 YDAEEELE-NKKGEVLGLPENFNKDQSPDSLEKLPTDNKEKKQKK 164
>gi|241205507|ref|YP_002976603.1| hypothetical protein Rleg_2803 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859397|gb|ACS57064.1| protein of unknown function DUF1321 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 171
Score = 214 bits (546), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 135/180 (75%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVAATGRLPGDHHFFITFLTGATGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWD+K+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDMKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE +G++ P + S D++ K+ + K K SV+SLD+FRKK
Sbjct: 121 ADGEEL----PSGEITAYPVD-----AASKPDDAAGAKTADGEEK-KPGSVVSLDSFRKK 170
>gi|218507824|ref|ZP_03505702.1| hypothetical protein RetlB5_09535 [Rhizobium etli Brasil 5]
gi|327189903|gb|EGE57034.1| hypothetical protein RHECNPAF_5110016 [Rhizobium etli CNPAF512]
Length = 171
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 131/180 (72%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVATTGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE +G++ P + + D + + K SV+SLD+FRKK
Sbjct: 121 ADGEEL----PSGEITAYPVD------AAAKPDETAGAKPADGEEKKPGSVVSLDSFRKK 170
>gi|116253000|ref|YP_768838.1| hypothetical protein RL3257 [Rhizobium leguminosarum bv. viciae
3841]
gi|115257648|emb|CAK08745.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 171
Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 132/180 (73%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVAATGRLPGDHHFFITFLTGATGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWD+K+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDMKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE G T + + D D++ K + K K SV+SLD+FRKK
Sbjct: 121 ADGEELPSGEITAYPVDAAGKPD---------DAAGAKPADGEEK-KPGSVVSLDSFRKK 170
>gi|86358404|ref|YP_470296.1| hypothetical protein RHE_CH02800 [Rhizobium etli CFN 42]
gi|86282506|gb|ABC91569.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 171
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 132/180 (73%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVATTGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE G T + S D +++ K + K K SV+SLD+FRKK
Sbjct: 121 ADGEELPSGEITAYPVDSAGKPD---------EAAGAKPADGEEK-KPGSVVSLDSFRKK 170
>gi|218463519|ref|ZP_03503610.1| hypothetical protein RetlK5_30634 [Rhizobium etli Kim 5]
Length = 171
Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 131/180 (72%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVATTGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE G T + + D+ + D +KK SV+SLD+FRKK
Sbjct: 121 ADGEELPSGEITAYPVDAAGKPDET-AGAKPADGEEKKP---------GSVVSLDSFRKK 170
>gi|209550126|ref|YP_002282043.1| hypothetical protein Rleg2_2544 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535882|gb|ACI55817.1| protein of unknown function DUF1321 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 171
Score = 212 bits (539), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 131/180 (72%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EV + G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVGATGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ ++HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITESHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE +G++ P + + D + + K SV+SLD+FRKK
Sbjct: 121 ADGEEL----PSGEITAYPVD------AAAKPDEAAGAKPADGEEKKPGSVVSLDSFRKK 170
>gi|190892529|ref|YP_001979071.1| hypothetical protein RHECIAT_CH0002944 [Rhizobium etli CIAT 652]
gi|190697808|gb|ACE91893.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 171
Score = 212 bits (539), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 131/180 (72%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVATTGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E+ +G++ P + + D + + K SV+SLD+FRKK
Sbjct: 121 ADGEDL----PSGEITAYPVD------AAAKPDETAGAKPADGEEKKPGSVVSLDSFRKK 170
>gi|222149085|ref|YP_002550042.1| hypothetical protein Avi_2824 [Agrobacterium vitis S4]
gi|221736070|gb|ACM37033.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 169
Score = 209 bits (533), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 131/180 (72%), Gaps = 12/180 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPGEHHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLTEVAATGRLPGEHHFFITFLTGAPGVRISQHLKAKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
E+MTIVIQ+QFWDLKV D+ FEVGLSFS+ PE+LVIPFNAI+GFYDPSVNFELEFDV
Sbjct: 61 AEQMTIVIQHQFWDLKVTDSLFEVGLSFSDTPEKLVIPFNAIRGFYDPSVNFELEFDV-- 118
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+EE N+ ++ P + S+ S + K + + K SV+SLD FRKK
Sbjct: 119 PQVEED---ENSAEITAYP-------LAAESEKSEDGAADKPEGEKKEGSVVSLDAFRKK 168
>gi|222086398|ref|YP_002544932.1| hypothetical protein Arad_2936 [Agrobacterium radiobacter K84]
gi|221723846|gb|ACM27002.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 169
Score = 208 bits (529), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 131/180 (72%), Gaps = 12/180 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EV + G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLTEVGATGRLPGDHHFFITFLTGAPGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ ++ FE+GLSFS+VPE+LV+PFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITESLFEIGLSFSDVPEKLVVPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE TG++ P + ++ V K+ + K SV+SLD FRKK
Sbjct: 121 ADDEEM----PTGEITAYPVAAEGSEEPVV--------EAKEGEEKKPGSVVSLDAFRKK 168
>gi|15965886|ref|NP_386239.1| hypothetical protein SMc01450 [Sinorhizobium meliloti 1021]
gi|307309645|ref|ZP_07589298.1| protein of unknown function DUF1321 [Sinorhizobium meliloti BL225C]
gi|307321783|ref|ZP_07601171.1| protein of unknown function DUF1321 [Sinorhizobium meliloti AK83]
gi|15075155|emb|CAC46712.1| Hypothetical protein SMc01450 [Sinorhizobium meliloti 1021]
gi|306892605|gb|EFN23403.1| protein of unknown function DUF1321 [Sinorhizobium meliloti AK83]
gi|306899980|gb|EFN30602.1| protein of unknown function DUF1321 [Sinorhizobium meliloti BL225C]
Length = 171
Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 133/180 (73%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EV++ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVSATGHLPGDHHFFITFLTGAPGVRISQHLKAKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWDLKV + FE+GLSFS+ PE+LVIP+NAI+GFYDPSVNFELEFDV
Sbjct: 61 PEQMTIVVQHQFWDLKVTETGFEIGLSFSDTPEKLVIPYNAIRGFYDPSVNFELEFDV-- 118
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ E ++ ++ P + T + + D+++K K ASV+SLD+FRKK
Sbjct: 119 --AAGEEEAADSAEITAYPLD---EATETATDDNTEKPDGPKGGG---ASVVSLDSFRKK 170
>gi|163758988|ref|ZP_02166074.1| hypothetical protein HPDFL43_04470 [Hoeflea phototrophica DFL-43]
gi|162283392|gb|EDQ33677.1| hypothetical protein HPDFL43_04470 [Hoeflea phototrophica DFL-43]
Length = 204
Score = 204 bits (519), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/191 (52%), Positives = 134/191 (70%), Gaps = 12/191 (6%)
Query: 23 TLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRK 82
LM DHIRYDILA++ALRG+++ VLSEVA+ G LPG+HHF+ITF T A GVRIS L++
Sbjct: 16 ALMPQDHIRYDILAQDALRGVIRKVLSEVAATGYLPGDHHFFITFLTEAPGVRISTQLKE 75
Query: 83 NYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV 142
YPE+MTIV+Q+QFWDLK+ ++ FE+GLSFS+ PE+LV+PF+AI+GFYDPSVNFELEFD
Sbjct: 76 RYPEQMTIVVQHQFWDLKISESQFEIGLSFSDKPEKLVVPFSAIRGFYDPSVNFELEFDT 135
Query: 143 HIEHI---------EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+E +E+ E +T + L P D T +D+ + +K A
Sbjct: 136 VLEDAANDGGDQDGDERNELASTIERLVEPSAKDDAATG---EDAETGDEGEDGDKKPGA 192
Query: 194 SVISLDNFRKK 204
V+SLD+FRKK
Sbjct: 193 DVVSLDSFRKK 203
>gi|150397228|ref|YP_001327695.1| hypothetical protein Smed_2027 [Sinorhizobium medicae WSM419]
gi|150028743|gb|ABR60860.1| protein of unknown function DUF1321 [Sinorhizobium medicae WSM419]
Length = 171
Score = 204 bits (519), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 134/180 (74%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EV++ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVSATGHLPGDHHFFITFLTGAPGVRISQHLKAKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWDLKV + FE+GLSFS+ PE+LVIP+NAI+GFYDPSVNFELEFDV
Sbjct: 61 PEQMTIVVQHQFWDLKVTETGFEIGLSFSDTPEKLVIPYNAIRGFYDPSVNFELEFDVAA 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+E ++ ++ P + + SV+ ++++K K AS++SLD+FRKK
Sbjct: 121 SEEQET----DSAEITAYP---VEETSESVTDENTEKPDGPKGGG---ASIVSLDSFRKK 170
>gi|227822603|ref|YP_002826575.1| hypothetical protein NGR_c20590 [Sinorhizobium fredii NGR234]
gi|227341604|gb|ACP25822.1| hypothetical protein NGR_c20590 [Sinorhizobium fredii NGR234]
Length = 170
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 125/180 (69%), Gaps = 11/180 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVAATGHLPGDHHFFITFLTGAPGVRISQHLKAKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFW+LKV + FE+GLSFS+ PE+LVIPFNA++GFYDPSVNFELEFDV
Sbjct: 61 PEQMTIVVQHQFWELKVSETGFEIGLSFSDTPEKLVIPFNAVRGFYDPSVNFELEFDVAS 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+E + ++ P N S K K SV+SLD+FRKK
Sbjct: 121 GEEDES----ESAEITAYP-------VNEADDASQKGPGPDGAPKGGGGSVVSLDSFRKK 169
>gi|218671608|ref|ZP_03521278.1| hypothetical protein RetlG_08073 [Rhizobium etli GR56]
Length = 161
Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/160 (58%), Positives = 119/160 (74%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVATTGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKST 184
EE G T + + D+ + KK +
Sbjct: 121 ADGEELPSGEITAYPVDAAGKPDETAGAKPADGEEKKPGS 160
>gi|15889336|ref|NP_355017.1| hypothetical protein Atu8171 [Agrobacterium tumefaciens str. C58]
gi|15157176|gb|AAK87802.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 168
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/181 (55%), Positives = 125/181 (69%), Gaps = 15/181 (8%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
E+MTIVIQ+QFWD+KV + FE+GLSFS+ PE+LVIP+NAI+GFYDPSVNFELEFDV +
Sbjct: 61 AEQMTIVIQHQFWDMKVTETGFEIGLSFSDTPEKLVIPYNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM-ASVISLDNFRK 203
EE E T VS ++ T K + K SV+SLD FRK
Sbjct: 121 AEEEEMEEAEIT--------------AYPVSHEAKPASETPKSGEEKKEGSVVSLDAFRK 166
Query: 204 K 204
K
Sbjct: 167 K 167
>gi|325293417|ref|YP_004279281.1| hypothetical protein AGROH133_07312 [Agrobacterium sp. H13-3]
gi|325061270|gb|ADY64961.1| hypothetical protein AGROH133_07312 [Agrobacterium sp. H13-3]
Length = 170
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 128/180 (71%), Gaps = 11/180 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
E+MTIVIQ+QFWDLKV + FE+GLSFS+ PE+LV+P+NAI+GFYDPSVNFELEFDV +
Sbjct: 61 AEQMTIVIQHQFWDLKVTEIGFEIGLSFSDTPEKLVVPYNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE E T ++ ++ ++ ++ K + K SV+SLD FRKK
Sbjct: 121 ADEEELEEAEITAYPVSHE-----------AKPATTSETPKSGEEKKEGSVVSLDAFRKK 169
>gi|90419199|ref|ZP_01227109.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336136|gb|EAS49877.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 189
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/198 (50%), Positives = 128/198 (64%), Gaps = 28/198 (14%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ V+ EV G LPG+HHF+ITF T A GVRIS LR+ Y
Sbjct: 1 MGQDHIRYDVLAQDALRGVIRKVIGEVVKTG-LPGDHHFFITFLTTAPGVRISSRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVH- 143
PE MTIVIQ+Q+WDL+V D FEVGLSFS++PERL+IPF AI+GFYDP+VNFELEFDV
Sbjct: 60 PELMTIVIQHQYWDLQVTDTSFEVGLSFSDIPERLLIPFAAIRGFYDPAVNFELEFDVRG 119
Query: 144 IEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM----------- 192
++ E+ EG + G D ++ + S + TK K K+
Sbjct: 120 MDAANEQSEGADDG---------DTDEIGTASPPAQILTPTKLHAKEKVAAAPASDDASQ 170
Query: 193 ------ASVISLDNFRKK 204
A V+SLD FRKK
Sbjct: 171 SEEKKDAEVVSLDAFRKK 188
>gi|148560026|ref|YP_001259299.1| hypothetical protein BOV_1361 [Brucella ovis ATCC 25840]
gi|254702125|ref|ZP_05163953.1| hypothetical protein Bsuib55_14874 [Brucella suis bv. 5 str. 513]
gi|254708077|ref|ZP_05169905.1| hypothetical protein BpinM_14262 [Brucella pinnipedialis
M163/99/10]
gi|254710447|ref|ZP_05172258.1| hypothetical protein BpinB_09312 [Brucella pinnipedialis B2/94]
gi|254714440|ref|ZP_05176251.1| hypothetical protein BcetM6_14093 [Brucella ceti M644/93/1]
gi|254717338|ref|ZP_05179149.1| hypothetical protein BcetM_13222 [Brucella ceti M13/05/1]
gi|256031941|ref|ZP_05445555.1| hypothetical protein BpinM2_15084 [Brucella pinnipedialis
M292/94/1]
gi|256061462|ref|ZP_05451606.1| hypothetical protein Bneo5_14000 [Brucella neotomae 5K33]
gi|256160139|ref|ZP_05457833.1| hypothetical protein BcetM4_14094 [Brucella ceti M490/95/1]
gi|256255345|ref|ZP_05460881.1| hypothetical protein BcetB_13864 [Brucella ceti B1/94]
gi|256369820|ref|YP_003107331.1| hypothetical protein BMI_I1416 [Brucella microti CCM 4915]
gi|260169077|ref|ZP_05755888.1| hypothetical protein BruF5_12099 [Brucella sp. F5/99]
gi|261219167|ref|ZP_05933448.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261222547|ref|ZP_05936828.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261315578|ref|ZP_05954775.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261318017|ref|ZP_05957214.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261322228|ref|ZP_05961425.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261325469|ref|ZP_05964666.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261752696|ref|ZP_05996405.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261758583|ref|ZP_06002292.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265989048|ref|ZP_06101605.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265998512|ref|ZP_06111069.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|148371283|gb|ABQ61262.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|255999983|gb|ACU48382.1| hypothetical protein BMI_I1416 [Brucella microti CCM 4915]
gi|260921131|gb|EEX87784.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260924256|gb|EEX90824.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294918|gb|EEX98414.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261297240|gb|EEY00737.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261301449|gb|EEY04946.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261304604|gb|EEY08101.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261738567|gb|EEY26563.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261742449|gb|EEY30375.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|262553136|gb|EEZ08970.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264661245|gb|EEZ31506.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 189
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 128/190 (67%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKV-LTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK---------MAS 194
+ GN + +P+ DK + + + KK+S ++ + A
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPTAD 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|306843249|ref|ZP_07475859.1| Hypothetical protein BIBO2_3005 [Brucella sp. BO2]
gi|306844303|ref|ZP_07476895.1| Hypothetical protein BIBO1_0974 [Brucella sp. BO1]
gi|306275375|gb|EFM57116.1| Hypothetical protein BIBO1_0974 [Brucella sp. BO1]
gi|306286572|gb|EFM58151.1| Hypothetical protein BIBO2_3005 [Brucella sp. BO2]
Length = 189
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 128/190 (67%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKV-LTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK---------MAS 194
+ GN + +P+ DK + + + KK+S ++ + A
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPSAD 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|23502275|ref|NP_698402.1| hypothetical protein BR1404 [Brucella suis 1330]
gi|161619352|ref|YP_001593239.1| hypothetical protein BCAN_A1437 [Brucella canis ATCC 23365]
gi|163843660|ref|YP_001628064.1| hypothetical protein BSUIS_A1456 [Brucella suis ATCC 23445]
gi|254704662|ref|ZP_05166490.1| hypothetical protein Bsuib36_12237 [Brucella suis bv. 3 str. 686]
gi|260566090|ref|ZP_05836560.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261755356|ref|ZP_05999065.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|23348249|gb|AAN30317.1| conserved hypothetical protein [Brucella suis 1330]
gi|161336163|gb|ABX62468.1| protein of unknown function DUF1321 [Brucella canis ATCC 23365]
gi|163674383|gb|ABY38494.1| protein of unknown function DUF1321 [Brucella suis ATCC 23445]
gi|260155608|gb|EEW90688.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261745109|gb|EEY33035.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 189
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 128/190 (67%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFFTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKV-LTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK---------MAS 194
+ GN + +P+ DK + + + KK+S ++ + A
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPTAD 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|17986886|ref|NP_539520.1| hypothetical protein BMEI0603 [Brucella melitensis bv. 1 str. 16M]
gi|225852886|ref|YP_002733119.1| hypothetical protein BMEA_A1452 [Brucella melitensis ATCC 23457]
gi|256045035|ref|ZP_05447936.1| hypothetical protein Bmelb1R_11134 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256263632|ref|ZP_05466164.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260565366|ref|ZP_05835850.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265991462|ref|ZP_06104019.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|17982527|gb|AAL51784.1| hypothetical protein BMEI0603 [Brucella melitensis bv. 1 str. 16M]
gi|225641251|gb|ACO01165.1| protein of unknown function DUF1321 [Brucella melitensis ATCC
23457]
gi|260151434|gb|EEW86528.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|263002246|gb|EEZ14821.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263093683|gb|EEZ17688.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|326409428|gb|ADZ66493.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326539135|gb|ADZ87350.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 189
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 127/190 (66%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+E A G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEAAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKV-LTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK---------MAS 194
+ GN + +P+ DK + + + KK+S ++ + A
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPTAD 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|62290297|ref|YP_222090.1| hypothetical protein BruAb1_1399 [Brucella abortus bv. 1 str.
9-941]
gi|82700221|ref|YP_414795.1| hypothetical protein BAB1_1423 [Brucella melitensis biovar Abortus
2308]
gi|189024531|ref|YP_001935299.1| hypothetical protein BAbS19_I13300 [Brucella abortus S19]
gi|237815806|ref|ZP_04594803.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254689599|ref|ZP_05152853.1| hypothetical protein Babob68_05389 [Brucella abortus bv. 6 str.
870]
gi|254694089|ref|ZP_05155917.1| hypothetical protein Babob3T_05384 [Brucella abortus bv. 3 str.
Tulya]
gi|254697741|ref|ZP_05159569.1| hypothetical protein Babob28_08558 [Brucella abortus bv. 2 str.
86/8/59]
gi|254730630|ref|ZP_05189208.1| hypothetical protein Babob42_05414 [Brucella abortus bv. 4 str.
292]
gi|256257848|ref|ZP_05463384.1| hypothetical protein Babob9C_10986 [Brucella abortus bv. 9 str.
C68]
gi|260546840|ref|ZP_05822579.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260755127|ref|ZP_05867475.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758346|ref|ZP_05870694.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260762172|ref|ZP_05874515.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884139|ref|ZP_05895753.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214388|ref|ZP_05928669.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|297248685|ref|ZP_06932403.1| hypothetical protein BAYG_01650 [Brucella abortus bv. 5 str. B3196]
gi|62196429|gb|AAX74729.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616322|emb|CAJ11379.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|189020103|gb|ACD72825.1| hypothetical protein BAbS19_I13300 [Brucella abortus S19]
gi|237789104|gb|EEP63315.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260095890|gb|EEW79767.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260668664|gb|EEX55604.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260672604|gb|EEX59425.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675235|gb|EEX62056.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260873667|gb|EEX80736.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260915995|gb|EEX82856.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|297175854|gb|EFH35201.1| hypothetical protein BAYG_01650 [Brucella abortus bv. 5 str. B3196]
Length = 189
Score = 191 bits (485), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 127/190 (66%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+E A G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEAAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKV-LTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK---------MAS 194
+ GN + +P+ DK + + + KK+S ++ + A
Sbjct: 120 FQPASDNDEGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPTAD 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|294852731|ref|ZP_06793404.1| hypothetical protein BAZG_01663 [Brucella sp. NVSL 07-0026]
gi|294821320|gb|EFG38319.1| hypothetical protein BAZG_01663 [Brucella sp. NVSL 07-0026]
Length = 189
Score = 190 bits (483), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 127/190 (66%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKV-LTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK---------MAS 194
+ GN + +P+ DK + + + KK+S ++ + A
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPTAD 179
Query: 195 VISLDNFRKK 204
V+ LD FRKK
Sbjct: 180 VVLLDAFRKK 189
>gi|119390693|pdb|2NYS|A Chain A, X-Ray Crystal Structure Of Protein Agr_c_3712 From
Agrobacterium Tumefaciens. Northeast Structural Genomics
Consortium Target Atr88.
gi|119390694|pdb|2NYS|B Chain B, X-Ray Crystal Structure Of Protein Agr_c_3712 From
Agrobacterium Tumefaciens. Northeast Structural Genomics
Consortium Target Atr88
Length = 176
Score = 190 bits (483), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 123/178 (69%), Gaps = 15/178 (8%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
DHIRYDILA++ALRG+++ VL EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y E+
Sbjct: 4 DHIRYDILAQDALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHLKSKYAEQ 63
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
TIVIQ+QFWD KV + FE+GLSFS+ PE+LVIP+NAI+GFYDPSVNFELEFDV +
Sbjct: 64 XTIVIQHQFWDXKVTETGFEIGLSFSDTPEKLVIPYNAIRGFYDPSVNFELEFDVPL--- 120
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM-ASVISLDNFRKK 204
K E ++ P VS ++ T K + K SV+SLD FRKK
Sbjct: 121 -AKEEEXEEAEITAYP----------VSHEAKPASETPKSGEEKKEGSVVSLDAFRKK 167
>gi|254719437|ref|ZP_05181248.1| hypothetical protein Bru83_07818 [Brucella sp. 83/13]
gi|265984441|ref|ZP_06097176.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839214|ref|ZP_07472031.1| Hypothetical protein BROD_2062 [Brucella sp. NF 2653]
gi|264663033|gb|EEZ33294.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306405761|gb|EFM62023.1| Hypothetical protein BROD_2062 [Brucella sp. NF 2653]
Length = 189
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 128/190 (67%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKV-LTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK---------MAS 194
+ GN + +P+ +K + + + KK+S ++ + A
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKANKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPSAD 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|13471488|ref|NP_103054.1| hypothetical protein mlr1474 [Mesorhizobium loti MAFF303099]
gi|14022230|dbj|BAB48840.1| mlr1474 [Mesorhizobium loti MAFF303099]
Length = 178
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 125/180 (69%), Gaps = 2/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVR+S LR+ Y
Sbjct: 1 MADDHIRYDILAQEALRGVMRKVLAEVARTG-LPGNHHFFITFLTGAPGVRVSSRLRERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ Q+WDLKV D FEVGLSFS+VPE+L IPF+A++GFYDPSVNFELEFDV
Sbjct: 60 PEQMTIVIQFQYWDLKVTDTGFEVGLSFSDVPEKLEIPFSAVRGFYDPSVNFELEFDVKT 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ E+ + LT + K + + +KK + K A V+SLD FRKK
Sbjct: 120 DAQPEEEPAQPASEPLTI-VSEKKPKAEKKAAAEPEKKPAATEAGAKGAEVVSLDAFRKK 178
>gi|319782907|ref|YP_004142383.1| hypothetical protein Mesci_3209 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168795|gb|ADV12333.1| hypothetical protein Mesci_3209 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 178
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 124/180 (68%), Gaps = 2/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVR+S LR+ Y
Sbjct: 1 MADDHIRYDILAQEALRGVMRKVLAEVARTG-LPGNHHFFITFLTGAPGVRVSSRLRERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ Q+WDLKV D FEVGLSFS+VPE+L IPF+A++GFYDPSVNFELEFDV
Sbjct: 60 PEQMTIVIQFQYWDLKVTDTGFEVGLSFSDVPEKLEIPFSAVRGFYDPSVNFELEFDVKT 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ T + LT + K + + ++KK K A V+SLD FRKK
Sbjct: 120 DGAAADEPAAPTPEPLTI-VSEKKPKAEKKAAAEAEKKPAAADAATKGAEVVSLDAFRKK 178
>gi|153009103|ref|YP_001370318.1| hypothetical protein Oant_1773 [Ochrobactrum anthropi ATCC 49188]
gi|151560991|gb|ABS14489.1| protein of unknown function DUF1321 [Ochrobactrum anthropi ATCC
49188]
Length = 194
Score = 188 bits (477), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 124/196 (63%), Gaps = 18/196 (9%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L +PF+A++GFYDPSVNFELEFDV I
Sbjct: 60 PEQMTIVLQHQFWDMLVTDQLFEVGLSFGDIPEKLTVPFSAVRGFYDPSVNFELEFDVAI 119
Query: 145 EHIE-EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK---------------KKSTKKQN 188
E + EGGN + P + S K T K+
Sbjct: 120 AQPESDNDEGGNVAPIEILPTEAPVEKAEKPKSKSRKTAAEKEAAAAKDNNADDGTDKEA 179
Query: 189 KNKMASVISLDNFRKK 204
K A V+SLD FRKK
Sbjct: 180 KPS-ADVVSLDAFRKK 194
>gi|260462151|ref|ZP_05810395.1| protein of unknown function DUF1321 [Mesorhizobium opportunistum
WSM2075]
gi|259032011|gb|EEW33278.1| protein of unknown function DUF1321 [Mesorhizobium opportunistum
WSM2075]
Length = 179
Score = 187 bits (475), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 105/181 (58%), Positives = 127/181 (70%), Gaps = 3/181 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVR+S LR+ Y
Sbjct: 1 MADDHIRYDILAQEALRGVMRKVLAEVARTG-LPGNHHFFITFLTGAPGVRVSSRLRERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ Q+WDLKV D FEVGLSFS+VPE+L IPF+A++GFYDPSVNFELEFDV
Sbjct: 60 PEQMTIVIQFQYWDLKVTDTGFEVGLSFSDVPEKLEIPFSAVRGFYDPSVNFELEFDVKT 119
Query: 145 E-HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E E+LE T + LT + K + + +KK K A V+SLD FRK
Sbjct: 120 EGAATEELEDQATPEPLTIV-SEKKTKAEKKAAAEPEKKPAAGDAAAKGAEVVSLDAFRK 178
Query: 204 K 204
K
Sbjct: 179 K 179
>gi|239832281|ref|ZP_04680610.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239824548|gb|EEQ96116.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 193
Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 134/196 (68%), Gaps = 19/196 (9%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L +PF+A++GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTVPFSAVRGFYDPSVNFELEFDVAV 119
Query: 145 EHIE-EKLEGGNTGKV----LTSP-DNFDKNQTNS----------VSQDSSKKKSTKKQN 188
E + EGGN + +P + +K ++ S S+DS+ ++ K+
Sbjct: 120 SQPESDNDEGGNVAPIEIASTEAPVEKAEKPKSKSRKTAAEKEAAASKDSNTDEADKEAK 179
Query: 189 KNKMASVISLDNFRKK 204
+ A V+SLD FRKK
Sbjct: 180 PS--ADVVSLDAFRKK 193
>gi|158426109|ref|YP_001527401.1| hypothetical protein AZC_4485 [Azorhizobium caulinodans ORS 571]
gi|158332998|dbj|BAF90483.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
Length = 217
Score = 184 bits (466), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 126/205 (61%), Gaps = 14/205 (6%)
Query: 13 QWFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNAR 72
+W + DHIRYD+LA+EALRG+V+ VLS+VA G LPG+HHFYI+F T A
Sbjct: 14 RWIRPEPSAGPMPPVDHIRYDLLAQEALRGVVRRVLSDVARDG-LPGDHHFYISFDTRAP 72
Query: 73 GVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDP 132
GVR+SQ +R+ YPE MTIV+Q+QFWDL V ++ EVGLSF VPE+L+IPF+A+KGF+DP
Sbjct: 73 GVRLSQRMREQYPEDMTIVLQHQFWDLNVTEHAVEVGLSFGGVPEKLLIPFSAMKGFFDP 132
Query: 133 SVNFELEFDVHIEHIEEKLEG-------------GNTGKVLTSPDNFDKNQTNSVSQDSS 179
SV F L+FD+ E +L+G G G ++P +V+
Sbjct: 133 SVKFGLQFDLGTPEEEPELDGVQDTEASAPVPLAGAKGSKASAPKLRGAASEPAVASAGG 192
Query: 180 KKKSTKKQNKNKMASVISLDNFRKK 204
+ + + + A V+ LD FRKK
Sbjct: 193 SDEKPEGEPSSGGAEVVRLDVFRKK 217
>gi|114706846|ref|ZP_01439746.1| hypothetical protein FP2506_18559 [Fulvimarina pelagi HTCC2506]
gi|114537794|gb|EAU40918.1| hypothetical protein FP2506_18559 [Fulvimarina pelagi HTCC2506]
Length = 190
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 129/190 (67%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D IRYD+LA++ALRG+++ VL EVA G LPGEHHF+ITF T+A GVRIS LR+ Y
Sbjct: 1 MSQDLIRYDVLAQDALRGVIRKVLGEVAKTG-LPGEHHFFITFLTSAPGVRISSRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVH- 143
P+ MTIV+Q+Q+WDL V +N FE+GLSFS++PE+L++PF+A++GFYDPSVNFELEFDV
Sbjct: 60 PDLMTIVVQHQYWDLSVTENSFEIGLSFSDIPEKLLVPFSAVRGFYDPSVNFELEFDVRG 119
Query: 144 -----IEHIEEKLEGGNT----GKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMAS 194
+ EE + + G + +P + S S + + + + + A
Sbjct: 120 AEAANSDEAEETVSADDAKPSGGALSATPLPVREKAEASASSSADSENDDESEEERPDAQ 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|254501136|ref|ZP_05113287.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222437207|gb|EEE43886.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 191
Score = 181 bits (458), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 128/192 (66%), Gaps = 14/192 (7%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D +RYDIL ++ALRG VK +L+EV G LPG+HHFYI F T A GV+ISQ L++ Y
Sbjct: 1 MSEDLLRYDILIQDALRGAVKKILAEVGRTG-LPGDHHFYIAFETTAPGVKISQRLKERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVH- 143
P++MTIV+Q+QFWDL + ++ FEVGLSF VPE+L++PF+AIKGF+DPSV F LEFD
Sbjct: 60 PQEMTIVLQHQFWDLAIGEHAFEVGLSFGGVPEKLLVPFSAIKGFFDPSVQFALEFDPGK 119
Query: 144 ---------IEHIEE--KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM 192
+E +EE K E T K++T+ DN + ++ +KK ++ +
Sbjct: 120 TAEELPEDLLEAVEELAKAEQETTEKLMTA-DNKQDDVPAVEAEKKTKKPDQDTEDGDGG 178
Query: 193 ASVISLDNFRKK 204
V+SLD FRKK
Sbjct: 179 GEVVSLDAFRKK 190
>gi|75676537|ref|YP_318958.1| hypothetical protein Nwi_2352 [Nitrobacter winogradskyi Nb-255]
gi|74421407|gb|ABA05606.1| Protein of unknown function DUF1321 [Nitrobacter winogradskyi
Nb-255]
Length = 182
Score = 181 bits (458), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 121/184 (65%), Gaps = 6/184 (3%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+L +A+RG+++ VL++ A G LPGEHHF+ITF + A GV IS L Y
Sbjct: 1 MPTDHIRYDLLTSDAMRGVLRRVLTDAAERG-LPGEHHFFITFKSKADGVTISPRLLTQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTI++Q+QFWDL V ++HFEVGLSF VPERLV+PF+AIK F+DPSV F L+F+
Sbjct: 60 PEEMTIILQHQFWDLIVTEDHFEVGLSFGGVPERLVVPFSAIKSFFDPSVQFGLQFEP-A 118
Query: 145 EHIEEKLEGGNTGKVLTS-PDNFDKNQTNSVSQDSSKKKSTKKQNKNKM---ASVISLDN 200
E E + E T + TS P +V D S+ + + +NK K A V+ LD
Sbjct: 119 ETGEAQAEKAETEETSTSEPSTAPSPTALAVPADPSQPAAAESENKPKPGQGAEVVRLDR 178
Query: 201 FRKK 204
FRKK
Sbjct: 179 FRKK 182
>gi|39936561|ref|NP_948837.1| hypothetical protein RPA3499 [Rhodopseudomonas palustris CGA009]
gi|39650417|emb|CAE28940.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
Length = 178
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 122/180 (67%), Gaps = 2/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VL++VA G LPGEHHF+ITF + GV++S L Y
Sbjct: 1 MATDHIRYDVLARDALRGVLRHVLTDVAQHG-LPGEHHFFITFQSKGDGVKLSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MT+V+Q+QFWDL V ++ FEVGLSF +PERLV+PF +IK F+DPSV F L+F+
Sbjct: 60 PEEMTVVLQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFASIKSFFDPSVKFGLQFEAAD 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E ++E E + +++T+ T+S + DSS + + A V+ LD FRKK
Sbjct: 120 E-VDETGEADDGTELVTAAPAPVALPTSSATTDSSAPSDDEPPRSGEGAEVVRLDRFRKK 178
>gi|92118241|ref|YP_577970.1| hypothetical protein Nham_2731 [Nitrobacter hamburgensis X14]
gi|91801135|gb|ABE63510.1| protein of unknown function DUF1321 [Nitrobacter hamburgensis X14]
Length = 202
Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/185 (47%), Positives = 119/185 (64%), Gaps = 5/185 (2%)
Query: 21 IDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNL 80
+D M+ DHIRYD+LA++ALRG+++ VL++ A G LPGEHHF+ITF + A GV+IS L
Sbjct: 22 MDQPMSTDHIRYDLLARDALRGVLRRVLTDAAEQG-LPGEHHFFITFMSKADGVKISPRL 80
Query: 81 RKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
+PE+MTI++Q+QFWDL V + FEVGLSF +PERLV+PFN+IK FYDPSV F L+F
Sbjct: 81 LAQHPEEMTIILQHQFWDLTVSEERFEVGLSFGGIPERLVVPFNSIKSFYDPSVQFGLQF 140
Query: 141 D-VHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
+ E + G + SP T S + ++ K ++ A V+ LD
Sbjct: 141 EPAETETAAADMPPGAPSPAVPSPAVLAVPDTPS---PPAAAETEDKPKPSEGAEVVRLD 197
Query: 200 NFRKK 204
FRKK
Sbjct: 198 RFRKK 202
>gi|110634332|ref|YP_674540.1| hypothetical protein Meso_1982 [Mesorhizobium sp. BNC1]
gi|110285316|gb|ABG63375.1| protein of unknown function DUF1321 [Chelativorans sp. BNC1]
Length = 177
Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 119/180 (66%), Gaps = 3/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL +EALRG+V+ VL EVA G LPG HHF+I F TNA GVRIS L++ Y
Sbjct: 1 MPEDRIRYDILVQEALRGVVRKVLQEVAQAG-LPGNHHFFIRFVTNAPGVRISSRLKERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ Q+WDLKV + FEV LSFS++PE+L IPF+A++GFYDPS +FE+EF+V
Sbjct: 60 PEEMTIVIQYQYWDLKVTEKGFEVVLSFSDIPEKLEIPFSAVRGFYDPSASFEVEFEVKQ 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E + E + K + + + + +++ + K A V+SLD FRKK
Sbjct: 120 E--QPHAEPAEPTLLKEEAKQPAKRKPAAERKTEGNEAPAEEKAEGKGAEVVSLDAFRKK 177
>gi|225627856|ref|ZP_03785893.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617861|gb|EEH14906.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 162
Score = 177 bits (450), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 110/150 (73%), Gaps = 2/150 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKV-LTSPDNFDKNQTNS 173
+ GN + +P+ DK + +
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKADKPKAKT 149
>gi|27381629|ref|NP_773158.1| hypothetical protein blr6518 [Bradyrhizobium japonicum USDA 110]
gi|27354797|dbj|BAC51783.1| blr6518 [Bradyrhizobium japonicum USDA 110]
Length = 172
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 115/182 (63%), Gaps = 12/182 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VL++ AS G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDHIRYDVLARDALRGVLRKVLTDAASHG-LPGEHHFFITFVSKAEGVKLSSRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVH- 143
PE+MTI++Q+QFWDL VL++ FEVGLSF +PERLV+PF+AIK F DPSV F L+FD
Sbjct: 60 PEEMTIILQHQFWDLTVLEDRFEVGLSFGGIPERLVVPFSAIKSFLDPSVKFGLQFDTSD 119
Query: 144 -IEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
E E L L+ P + + D ++ A V+ LD FR
Sbjct: 120 VAEVAPETLPAAPAPSALSVP---------TPATDKAETAEEPTPPSQGGAEVVRLDRFR 170
Query: 203 KK 204
KK
Sbjct: 171 KK 172
>gi|91977825|ref|YP_570484.1| hypothetical protein RPD_3359 [Rhodopseudomonas palustris BisB5]
gi|91684281|gb|ABE40583.1| protein of unknown function DUF1321 [Rhodopseudomonas palustris
BisB5]
Length = 194
Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 122/183 (66%), Gaps = 12/183 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA+EALRG+++ VL++VA G LPGEHHF+ITF + A GVR+S L Y
Sbjct: 21 MATDHIRYDVLAREALRGVLRQVLTDVAQHG-LPGEHHFFITFLSKADGVRLSTRLLAQY 79
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MT+++Q+QFWDL V ++ FEVGLSF +PERLV+PF+AIK F+DPSV F L+F+ +
Sbjct: 80 PEEMTVILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFSAIKSFFDPSVQFGLQFETN- 138
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSV---SQDSSKKKSTKKQNKNKMASVISLDNF 201
EG ++P+ T ++ ++ + ++ K++ A V+ LD F
Sbjct: 139 -------EGAAETADASAPEIAAPAATPAMLAATESAPTDAGDEEPVKSEGAEVVRLDRF 191
Query: 202 RKK 204
RKK
Sbjct: 192 RKK 194
>gi|118590865|ref|ZP_01548265.1| hypothetical protein SIAM614_19431 [Stappia aggregata IAM 12614]
gi|118436387|gb|EAV43028.1| hypothetical protein SIAM614_19431 [Stappia aggregata IAM 12614]
Length = 191
Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 124/195 (63%), Gaps = 20/195 (10%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D +RYDIL ++ALRG VK +L+EV G LPG+HHFYI F TNA GVRISQ L++ Y
Sbjct: 1 MSEDLLRYDILIQDALRGAVKKILAEVGRTG-LPGDHHFYIAFDTNAPGVRISQRLKERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD--- 141
P++MTIV+Q+QFWDL + ++ FEVGLSF VPE+L++PF+AIKGF+DPSV F LEFD
Sbjct: 60 PQEMTIVLQHQFWDLAIGEHAFEVGLSFGGVPEKLLVPFSAIKGFFDPSVQFALEFDPGK 119
Query: 142 ------------VHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK 189
V E+ G N K D + ++ + ++ +K + +N
Sbjct: 120 TAEELPEELLEAVEELARAEQEHGDNEAKQ----DEGNGDREAASAEPKAKPAAQATENS 175
Query: 190 NKMASVISLDNFRKK 204
+ V+SLD FRKK
Sbjct: 176 DGGGEVVSLDAFRKK 190
>gi|316933221|ref|YP_004108203.1| hypothetical protein Rpdx1_1858 [Rhodopseudomonas palustris DX-1]
gi|315600935|gb|ADU43470.1| hypothetical protein Rpdx1_1858 [Rhodopseudomonas palustris DX-1]
Length = 178
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 121/180 (67%), Gaps = 2/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VL++VA G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDHIRYDVLARDALRGVLRHVLTDVAQHG-LPGEHHFFITFQSRADGVKLSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MT+V+Q+QFWDL V ++ FEVGLSF +PERLV+PF AIK F+DPSV F L+F+
Sbjct: 60 PEEMTVVLQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFAAIKSFFDPSVKFGLQFEAAD 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E I+E E + +++T+ S + ++S + + A V+ LD FRKK
Sbjct: 120 E-IDETGESDDATELVTAAPPPVALPPASATLENSAPSDDEPARSGEGAEVVRLDRFRKK 178
>gi|85714700|ref|ZP_01045687.1| hypothetical protein NB311A_20996 [Nitrobacter sp. Nb-311A]
gi|85698585|gb|EAQ36455.1| hypothetical protein NB311A_20996 [Nitrobacter sp. Nb-311A]
Length = 181
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 117/183 (63%), Gaps = 5/183 (2%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+L +A+RG+++ VL++ A G LPGEHHF+ITF + A GV IS L Y
Sbjct: 1 MPTDHIRYDLLTSDAMRGVLRRVLTDAAEHG-LPGEHHFFITFMSKADGVTISSRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTI++Q+QFWDL V ++HFEVGLSF VPERLV+PF+AIK F+DPSV F L+F+
Sbjct: 60 PEEMTIILQHQFWDLTVTEDHFEVGLSFGGVPERLVVPFSAIKSFFDPSVQFGLQFEP-A 118
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM---ASVISLDNF 201
E + + E + P + D S+ + + ++K K A V+ LD F
Sbjct: 119 ETEKAETEKAEIETNASEPSTAPSPTALAAPADHSQPTAAETEDKPKPGQGAEVVRLDRF 178
Query: 202 RKK 204
RKK
Sbjct: 179 RKK 181
>gi|154245365|ref|YP_001416323.1| hypothetical protein Xaut_1418 [Xanthobacter autotrophicus Py2]
gi|154159450|gb|ABS66666.1| protein of unknown function DUF1321 [Xanthobacter autotrophicus
Py2]
Length = 198
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 122/201 (60%), Gaps = 25/201 (12%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ DHIRYD+LA+EALR +V+ VL +VA G LPGEHHFYI+F T A GVR+SQ + + Y
Sbjct: 1 MSVDHIRYDLLAQEALRSVVRRVLLDVAKTG-LPGEHHFYISFDTRAPGVRLSQRMLEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWDL V D FEVGLSF +PERL++PF+A+KGF+DPSV F L+F++
Sbjct: 60 PEEMTIVLQHQFWDLIVTDTTFEVGLSFGGIPERLLVPFSALKGFFDPSVKFGLQFELAA 119
Query: 145 EHIEEK---------------------LEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKS 183
E + G + VL S ++ + Q++ ++
Sbjct: 120 NESEAEESDDSPFEAPRSANAPAPLRPARGAASEPVLASAVPTAASEAGATGQNTGQEAG 179
Query: 184 TKKQNKNKMASVISLDNFRKK 204
+ + A V+ LD FR K
Sbjct: 180 ERPASG---AQVVQLDVFRNK 197
>gi|170750912|ref|YP_001757172.1| hypothetical protein Mrad2831_4523 [Methylobacterium radiotolerans
JCM 2831]
gi|170657434|gb|ACB26489.1| protein of unknown function DUF1321 [Methylobacterium radiotolerans
JCM 2831]
Length = 208
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 126/208 (60%), Gaps = 29/208 (13%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFY++F T A GVR+SQ LR+ Y
Sbjct: 1 MADDLIRYDLLVQDALRGVVRKVLTDAAREG-LMGEHHFYVSFRTEAPGVRMSQALREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVH- 143
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL++PF+A+ GF+DPSV F L+FD+
Sbjct: 60 PQDMTIVLQHQFWDLNVTEHAFEVGLSFSGVPERLLVPFDALSGFFDPSVQFGLKFDLSE 119
Query: 144 -IEHIEE----------KLEGGNTGKV-----------LTSPDNFDK-----NQTNSVSQ 176
E EE + G G+V ++P + +
Sbjct: 120 AGETPEEANAAPAKPGPRGAGSEPGEVRPKSAGLATIGASAPKGLPAPAAQGEKAAGKAD 179
Query: 177 DSSKKKSTKKQNKNKMASVISLDNFRKK 204
D + + + KK+ + A V+SLD FRKK
Sbjct: 180 DKAPRPAAKKEGEEGSAEVVSLDAFRKK 207
>gi|328542988|ref|YP_004303097.1| hypothetical protein SL003B_1369 [polymorphum gilvum SL003B-26A1]
gi|326412734|gb|ADZ69797.1| hypothetical protein SL003B_1369 [Polymorphum gilvum SL003B-26A1]
Length = 202
Score = 167 bits (424), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 121/202 (59%), Gaps = 23/202 (11%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D +RYDIL ++ALRG VK +L+EVA G LPG+HHFYI F T A GVRIS +R+ Y
Sbjct: 1 MAEDLLRYDILVQDALRGAVKKILAEVARTG-LPGDHHFYIAFDTTAPGVRISSRIRERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD--- 141
P +MTIV+Q+QFWDL + ++ FEVGLSF VPE+L+IPF+AIKGF+DPSV F LEF+
Sbjct: 60 PSEMTIVLQHQFWDLAIGEHAFEVGLSFGGVPEKLLIPFSAIKGFFDPSVQFALEFEPGK 119
Query: 142 VHIEHIEEKLEG-GNTGKVLTSPDN---FDKNQTNSVSQDSSKKKSTKKQNKNKMA---- 193
E E+ LE G V S D ++ + ++ K K K +A
Sbjct: 120 TAEELPEDLLEAVGELADVEASAARDLVRDADKAPAANKTPRKSKRDAAPTKADVAKGEK 179
Query: 194 -----------SVISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 EATPKASEAGGEVVSLDAFRKK 201
>gi|304392195|ref|ZP_07374137.1| conserved hypothetical protein [Ahrensia sp. R2A130]
gi|303296424|gb|EFL90782.1| conserved hypothetical protein [Ahrensia sp. R2A130]
Length = 188
Score = 167 bits (423), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 120/179 (67%), Gaps = 4/179 (2%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D IRYDILA+EALRG+V+ VL E A G LPGEHHFYITF T GVR+S +R+ YP++
Sbjct: 12 DLIRYDILAQEALRGVVRKVLQEAARTG-LPGEHHFYITFDTGHAGVRLSSRMREKYPDE 70
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
MTIVIQ+QFWDL+ ++ F +GLSF +PE ++IPF A+ GF+DPSV F L+FD +E
Sbjct: 71 MTIVIQHQFWDLETTEHSFSIGLSFDGIPETMLIPFPAVTGFFDPSVQFGLQFDADVEDE 130
Query: 148 EEKLEGGNTGKV--LTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+E+ N V L SP + ++ + ++ +K T+ + A V+SLD FRKK
Sbjct: 131 DEEEGPANPASVSALPSPVRVETDKERAEVKE-AKLPETEDDGEAASADVVSLDAFRKK 188
>gi|188582029|ref|YP_001925474.1| hypothetical protein Mpop_2784 [Methylobacterium populi BJ001]
gi|179345527|gb|ACB80939.1| protein of unknown function DUF1321 [Methylobacterium populi BJ001]
Length = 220
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 130/220 (59%), Gaps = 41/220 (18%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFYI+F T A GVR+SQ LR+ Y
Sbjct: 1 MAEDLIRYDLLVQDALRGVVRKVLTDAAREG-LSGEHHFYISFRTEAPGVRMSQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV-- 142
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL+IPF+A+ GF+DPSV F L+FD+
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHSFEVGLSFSGVPERLLIPFDALSGFFDPSVQFGLKFDLNE 119
Query: 143 --HIEHIEE-----------------------------KLEGGNTG-KVLTSPDNFDKNQ 170
E EE ++ G G K++ + K +
Sbjct: 120 GAEGEQTEETQPSAPIKPGPRGAASEPAEIKPKGTGLATVQSGQGGPKIVPALPAAGKAK 179
Query: 171 TNSVSQDSS------KKKSTKKQNKNKMASVISLDNFRKK 204
+ S + S K ++ +K +++ A V+SLD FRKK
Sbjct: 180 ADPKSDNKSEDGVEAKPEAAEKTDRDGTAEVVSLDAFRKK 219
>gi|182677764|ref|YP_001831910.1| hypothetical protein Bind_0771 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633647|gb|ACB94421.1| protein of unknown function DUF1321 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 184
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 119/187 (63%), Gaps = 11/187 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ G LPGEHHFYITF T+A GVR+S +R+ Y
Sbjct: 1 MAVDLIRYDLLVQDALRGVVRKVLTDAVREG-LPGEHHFYITFRTHAPGVRLSAAMREQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTI++Q+QFWDL V + FEVGLSF VPE L IPF+A+ GF+DPSV F L+F++
Sbjct: 60 PDEMTIILQHQFWDLSVNEQAFEVGLSFKGVPEILRIPFDAVTGFFDPSVRFALKFELED 119
Query: 145 EHIEEKL-------EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVIS 197
E +E +G G V + Q +S + SS+ S + K V+S
Sbjct: 120 EAVEAGANDTDTPDQGRPDGAVPLLVASESPAQGSSTAAGSSESSSLPAPEEAK---VVS 176
Query: 198 LDNFRKK 204
+D FRKK
Sbjct: 177 IDAFRKK 183
>gi|115524158|ref|YP_781069.1| hypothetical protein RPE_2145 [Rhodopseudomonas palustris BisA53]
gi|115518105|gb|ABJ06089.1| protein of unknown function DUF1321 [Rhodopseudomonas palustris
BisA53]
Length = 169
Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 114/180 (63%), Gaps = 11/180 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VL++ A G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDHIRYDVLARDALRGVLRRVLTDAAEHG-LPGEHHFFITFLSRAEGVKMSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P +MT+++Q+QFWDL V ++ FEVGLSF VPERLV+PF+AIK F DPSV F L+F+
Sbjct: 60 PTEMTVILQHQFWDLVVTEDRFEVGLSFGGVPERLVVPFSAIKSFLDPSVEFGLQFEPDA 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E+ T PD +Q + + + + ++ A V+ LD FRKK
Sbjct: 120 PADEQAANEAET------PDGVGIGS----AQAGTGEPTDEPTKPSEGAEVVRLDRFRKK 169
>gi|146342424|ref|YP_001207472.1| hypothetical protein BRADO5583 [Bradyrhizobium sp. ORS278]
gi|146195230|emb|CAL79255.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 188
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 121/190 (63%), Gaps = 12/190 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VL++ A+ G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDHIRYDVLARDALRGVLRRVLTDAATHG-LPGEHHFFITFVSKAEGVKLSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTI++Q+QFWDL V ++ FEVGLSF +PERLV+PF+AIK F+DPSV F L+F+
Sbjct: 60 PDEMTIILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFHAIKSFFDPSVQFGLQFEPS- 118
Query: 145 EHIEEK---------LEGGNTGKVLTSPDNFDKNQTNSVSQDS-SKKKSTKKQNKNKMAS 194
E I E +L + +QT+ + D+ + + + + A
Sbjct: 119 EAIAETPAAPKLPAAPMPSAVPAILPTSAAKTSDQTSDKAGDNLADDEPAPPPSSGEGAE 178
Query: 195 VISLDNFRKK 204
V+ LD FRKK
Sbjct: 179 VVRLDRFRKK 188
>gi|218530840|ref|YP_002421656.1| hypothetical protein Mchl_2889 [Methylobacterium chloromethanicum
CM4]
gi|218523143|gb|ACK83728.1| protein of unknown function DUF1321 [Methylobacterium
chloromethanicum CM4]
Length = 217
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 124/223 (55%), Gaps = 50/223 (22%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFYI+F T A GVR+SQ LR+ Y
Sbjct: 1 MAEDLIRYDLLVQDALRGVVRKVLTDAAREG-LSGEHHFYISFRTEAPGVRMSQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV-- 142
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL+IPF+A+ GF+DPSV F L+FD+
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHSFEVGLSFSGVPERLLIPFDALSGFFDPSVQFGLKFDLNE 119
Query: 143 --HIEHIEE---------------------------------------KLEGGNTGKVLT 161
E EE L K
Sbjct: 120 GAEGEQSEETQPSAPAKTGPRGAGSEPAEIKPKSTGLATVQNGPKIVPALPASGKAKTDL 179
Query: 162 SPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
PDN ++ +K ++ +K +++ A V+SLD FRKK
Sbjct: 180 RPDNKPEDGAE------AKPEAAEKTDRDGTAEVVSLDAFRKK 216
>gi|192292379|ref|YP_001992984.1| hypothetical protein Rpal_4013 [Rhodopseudomonas palustris TIE-1]
gi|192286128|gb|ACF02509.1| protein of unknown function DUF1321 [Rhodopseudomonas palustris
TIE-1]
Length = 178
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 121/180 (67%), Gaps = 2/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VL++VA G LPGEHHF+ITF + GV++S L Y
Sbjct: 1 MAIDHIRYDVLARDALRGVLRHVLTDVAQHG-LPGEHHFFITFQSKGDGVKLSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MT+V+Q+QFWDL V ++ FEVGLSF +PERLV+PF +IK F+DPSV F L+F+
Sbjct: 60 PEEMTVVLQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFASIKSFFDPSVKFGLQFEAAD 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E ++E E + +++T+ T+S + DSS + A V+ LD FRKK
Sbjct: 120 E-VDETGEADDGTELVTAAPAPVALSTSSATTDSSAPSDDDAPRSGEGAEVVRLDRFRKK 178
>gi|254561826|ref|YP_003068921.1| hypothetical protein METDI3421 [Methylobacterium extorquens DM4]
gi|254269104|emb|CAX25067.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 217
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 129/223 (57%), Gaps = 50/223 (22%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFYI+F T A GVR+SQ LR+ Y
Sbjct: 1 MAEDLIRYDLLVQDALRGVVRKVLTDAAREG-LSGEHHFYISFRTEAPGVRMSQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL+IPF+A+ GF+DPSV F L+FD++
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHSFEVGLSFSGVPERLLIPFDALSGFFDPSVQFGLKFDLNE 119
Query: 145 ---------------------------EHIEEKLEGGNT--------------GKVLTS- 162
I+ K G T GK T
Sbjct: 120 GAEGEQAEETQPSAPAKSGPRGAGSEPAEIKPKSTGLATVQNGPKIVPALPASGKAKTDL 179
Query: 163 -PDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
PDN ++ + +K ++ +K +++ A V+SLD FRKK
Sbjct: 180 KPDNKPEDGSE------AKPEAAEKTDRDGTAEVVSLDAFRKK 216
>gi|240139410|ref|YP_002963885.1| hypothetical protein MexAM1_META1p2855 [Methylobacterium extorquens
AM1]
gi|240009382|gb|ACS40608.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 217
Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 128/223 (57%), Gaps = 50/223 (22%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFYI+F T A GVR+SQ LR+ Y
Sbjct: 1 MAEDLIRYDLLVQDALRGVVRKVLTDAAREG-LSGEHHFYISFRTEAPGVRMSQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL+IPF+A+ GF+DPSV F L+FD++
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHSFEVGLSFSGVPERLLIPFDALSGFFDPSVQFGLKFDLNE 119
Query: 145 ---------------------------EHIEEKLEGGNT--------------GKVLTS- 162
I+ K G T GK T
Sbjct: 120 GAEGEQAEETQPSAPAKAGPRGAGSEPAEIKPKSTGLATVQNGPKIVPALPASGKAKTDL 179
Query: 163 -PDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
PDN ++ +K ++ +K +++ A V+SLD FRKK
Sbjct: 180 KPDNKPEDGAE------AKPEAAEKTDRDGTAEVVSLDAFRKK 216
>gi|163852082|ref|YP_001640125.1| hypothetical protein Mext_2662 [Methylobacterium extorquens PA1]
gi|163663687|gb|ABY31054.1| protein of unknown function DUF1321 [Methylobacterium extorquens
PA1]
Length = 217
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 125/217 (57%), Gaps = 38/217 (17%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFYI+F T A GVR+SQ LR+ Y
Sbjct: 1 MAEDLIRYDLLVQDALRGVVRKVLTDAAREG-LSGEHHFYISFRTEAPGVRMSQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL+IPF+A+ GF+DPSV F L+FD++
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHSFEVGLSFSGVPERLLIPFDALSGFFDPSVQFGLKFDLNE 119
Query: 145 -------------------------EHIEEKLEGGNTGKVLTSPD-----------NFDK 168
E E K + V P D
Sbjct: 120 GAEGEQAEETQPSAPAKAGPRGAGSEPAEIKPKSTGLATVQNGPKIVPALPASGKAKTDL 179
Query: 169 NQTNSVSQDS-SKKKSTKKQNKNKMASVISLDNFRKK 204
N + S +K ++ +K +++ A V+SLD FRKK
Sbjct: 180 KPDNKLDDGSEAKPEAAEKTDRDGTAEVVSLDAFRKK 216
>gi|319405987|emb|CBI79619.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 181
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 124/183 (67%), Gaps = 5/183 (2%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL EVA G LPG HHF+ITF TNA G++IS L+K Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLEVAKAG-LPGNHHFFITFLTNAPGIKISPRLQKRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV-- 142
P++MTIV+Q+QF DL V + FEV LSF + E+LVIPFN+I+ FYDP FE FD+
Sbjct: 60 PDQMTIVLQHQFRDLSVSETAFEVTLSFGEITEKLVIPFNSIQVFYDPIAAFETAFDLPS 119
Query: 143 HIEHIEEK-LEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNF 201
++ E K LE + V+ S +N + +S ++K+S+ +K + A+++SLD+F
Sbjct: 120 NLTSGESKNLENASCAPVIPSDKQKKENISTKISTLKTEKESSNNDSK-QSANIVSLDSF 178
Query: 202 RKK 204
RKK
Sbjct: 179 RKK 181
>gi|256113952|ref|ZP_05454740.1| hypothetical protein Bmelb3E_14330 [Brucella melitensis bv. 3 str.
Ether]
gi|265995299|ref|ZP_06107856.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|262766412|gb|EEZ12201.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
Length = 112
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/113 (66%), Positives = 92/113 (81%), Gaps = 1/113 (0%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+E A G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEAAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFE 137
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFE
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFE 112
>gi|148257353|ref|YP_001241938.1| hypothetical protein BBta_6105 [Bradyrhizobium sp. BTAi1]
gi|146409526|gb|ABQ38032.1| hypothetical protein BBta_6105 [Bradyrhizobium sp. BTAi1]
Length = 175
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 112/180 (62%), Gaps = 5/180 (2%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VLS+ A+ G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDHIRYDVLARDALRGVLRRVLSDAAAHG-LPGEHHFFITFVSKAEGVKLSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTI++Q+QFWDL V ++ FEVGLSF +PERLV+PF+AIK F+DPSV F L+F+
Sbjct: 60 PEEMTIILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFHAIKSFFDPSVQFGLQFEPS- 118
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E I E + + D + + A V+ LD FRKK
Sbjct: 119 EAIAETPASPKLPAAPAPAALAPAPVAAASAADDQPEPPAP---SGEGAEVVRLDRFRKK 175
>gi|49474439|ref|YP_032481.1| hypothetical protein BQ08680 [Bartonella quintana str. Toulouse]
gi|49239943|emb|CAF26347.1| hypothetical protein BQ08680 [Bartonella quintana str. Toulouse]
Length = 181
Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 115/183 (62%), Gaps = 5/183 (2%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL EVA G LPG HHF+ITF TNA G++IS L+ Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLEVAKAG-LPGNHHFFITFLTNAPGIKISTRLKSRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QF DL V + FEV LSF + E+LVIPFNAI+ FYDP FE FD+
Sbjct: 60 PEQMTIVLQHQFRDLSVSEIAFEVTLSFKEIAEKLVIPFNAIQVFYDPVAAFEAAFDLPS 119
Query: 145 EHI---EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNF 201
+E LE V+ S D K + Q+S K + + + A V+SLD+F
Sbjct: 120 NPTSGKDENLENTAPASVMLS-DKQKKANIFTKEQNSKANKESSNNDSKQSADVVSLDSF 178
Query: 202 RKK 204
RKK
Sbjct: 179 RKK 181
>gi|307945916|ref|ZP_07661252.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307771789|gb|EFO31014.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 158
Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/117 (63%), Positives = 93/117 (79%), Gaps = 1/117 (0%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D +RYDIL ++ALRG VK +LSEV G LPGEHHFYI F T A GVRIS L++ Y
Sbjct: 9 MAEDLLRYDILIQDALRGAVKKILSEVGRTG-LPGEHHFYIAFETTAPGVRISSRLKERY 67
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
P++MTIV+Q+QFWDL + ++ FEVGLSF VPE+L++P++AIKGF+DPSV F LEFD
Sbjct: 68 PQEMTIVLQHQFWDLAIGEHAFEVGLSFGGVPEKLLVPYSAIKGFFDPSVQFALEFD 124
>gi|49475837|ref|YP_033878.1| hypothetical protein BH11040 [Bartonella henselae str. Houston-1]
gi|49238645|emb|CAF27889.1| hypothetical protein BH11040 [Bartonella henselae str. Houston-1]
Length = 181
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/184 (48%), Positives = 118/184 (64%), Gaps = 7/184 (3%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VLSEVA G LPG HHF+ITF TNA GV+IS L+ Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLSEVAKAG-LPGSHHFFITFLTNAPGVKISTRLKSRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QF DL V + FEV LSF V E+LVIPF++I+ FYDP FE FD+
Sbjct: 60 PEQMTIVLQHQFRDLNVSETAFEVTLSFREVSEKLVIPFHSIQVFYDPVAAFEAAFDLP- 118
Query: 145 EHIEEKLEGGNTGKVLTSP----DNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDN 200
++ K EG N + ++P D K + Q S K + + + A V+SLD+
Sbjct: 119 SNLNSK-EGENLENIASTPVILSDTQKKEKKFPKEQISKTNKDSSNNDTKQSADVVSLDS 177
Query: 201 FRKK 204
FRKK
Sbjct: 178 FRKK 181
>gi|319407481|emb|CBI81131.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 181
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 119/186 (63%), Gaps = 11/186 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL EVA G LPG HHF+ITF TNA G++IS L+K Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLEVAKAG-LPGNHHFFITFLTNAPGIKISPRLQKRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVH- 143
P++MTIV+Q+QF DL V + FEV LSF + E+LVIPFN+I+ FYDP FE FD+
Sbjct: 60 PDQMTIVLQHQFRDLSVSETAFEVTLSFGEITEKLVIPFNSIQVFYDPIAAFETAFDLPP 119
Query: 144 --IEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN---KMASVISL 198
+ LE + + S DK + S+S S K+ K+ + N + A ++SL
Sbjct: 120 TLTSGESQNLETASCSPFIPS----DKQKKESISTKISNLKTEKEPSNNDSKQSADIVSL 175
Query: 199 DNFRKK 204
D+FRKK
Sbjct: 176 DSFRKK 181
>gi|163868695|ref|YP_001609907.1| hypothetical protein Btr_1573 [Bartonella tribocorum CIP 105476]
gi|161018354|emb|CAK01912.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 181
Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 116/187 (62%), Gaps = 13/187 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VLSEVA G LPG HHF+ITF TNA GV+IS L+ Y
Sbjct: 1 MITDQIRYDILVQDALRGVIRKVLSEVAKAG-LPGNHHFFITFFTNAPGVKISPRLKNRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QF DL V + FEV LSF + E+LVIPF +I+ FYDP FE FD
Sbjct: 60 PEQMTIVLQHQFRDLSVSETAFEVTLSFREITEKLVIPFTSIQVFYDPVAAFEAAFD--- 116
Query: 145 EHIEEKLEGGNTGKVLTSP------DNFDKNQ-TNSVSQDSSKKKSTKKQNKNKMASVIS 197
+ KL G + +P N K + T + Q+ S KK + + A V+S
Sbjct: 117 --LPSKLPSGESEDAENTPSTPIALSNQQKQENTPTKEQNLSTKKEPLNNDTKQSADVVS 174
Query: 198 LDNFRKK 204
LD+FRKK
Sbjct: 175 LDSFRKK 181
>gi|217976786|ref|YP_002360933.1| protein of unknown function DUF1321 [Methylocella silvestris BL2]
gi|217502162|gb|ACK49571.1| protein of unknown function DUF1321 [Methylocella silvestris BL2]
Length = 180
Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 116/182 (63%), Gaps = 5/182 (2%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL +EALRG+V+ VL+++A G L GEHHFYITF TN RGVR+S +R+ Y
Sbjct: 1 MAADLIRYDILVQEALRGVVRKVLADMAREG-LVGEHHFYITFRTNGRGVRLSARMRELY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTI++Q+QFWDL V ++ FEVGLSF NVPE L++PF+A+ F DP+ F+LEF +
Sbjct: 60 PEEMTIILQHQFWDLSVSEHAFEVGLSFKNVPEMLLVPFDAVTRFSDPAAGFDLEFKLD- 118
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMAS--VISLDNFR 202
E +E + +P + S+ S K K+ N ++S+D FR
Sbjct: 119 EAVETSANDAGSPVEGDAP-ALSLPEKASLQGAESDAKVIKEMNVTSAGEDKIVSIDKFR 177
Query: 203 KK 204
KK
Sbjct: 178 KK 179
>gi|90424761|ref|YP_533131.1| hypothetical protein RPC_3270 [Rhodopseudomonas palustris BisB18]
gi|90106775|gb|ABD88812.1| protein of unknown function DUF1321 [Rhodopseudomonas palustris
BisB18]
Length = 172
Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 114/183 (62%), Gaps = 14/183 (7%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+LA++ALRG+++ VL++ A G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDLIRYDVLARDALRGVLRQVLTDAAEHG-LPGEHHFFITFLSTAEGVKLSPRLLVQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MT+++Q+QFWDL V ++ FEVGLSF +PERLV+PF +IK F+DPSV F L+F+ +
Sbjct: 60 PQEMTVILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFASIKSFFDPSVEFGLQFEPSL 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM---ASVISLDNF 201
E V SP +V +D + S + K A V+ LD F
Sbjct: 120 PG-EVPAANQPAASVPASP---------AVPRDDAPAASETPAEQPKPSEGAEVVRLDRF 169
Query: 202 RKK 204
RKK
Sbjct: 170 RKK 172
>gi|209884415|ref|YP_002288272.1| hypothetical protein OCAR_5275 [Oligotropha carboxidovorans OM5]
gi|209872611|gb|ACI92407.1| protein of unknown function [Oligotropha carboxidovorans OM5]
Length = 169
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 115/182 (63%), Gaps = 15/182 (8%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+++ VL++ A G LPGEHHFYITF +NA GVRIS L Y
Sbjct: 1 MATDLIRYDVLTRDALRGVLRRVLTDAAEHG-LPGEHHFYITFLSNADGVRISPRLLSQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTI++Q+QFWDL V ++ FEVGLSF +PERLV+PFNAI F+DP+V F L+F+
Sbjct: 60 PQEMTIILQHQFWDLVVREDEFEVGLSFGGIPERLVVPFNAITRFFDPAVQFGLQFET-- 117
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK--KKSTKKQNKNKMASVISLDNFR 202
G++ P ++ + ++ ++++ + A V+ LD FR
Sbjct: 118 --------AEMAGEI--EPATIEEAEKLAIPAETTENPDDDGDDHPHDGGAQVVRLDRFR 167
Query: 203 KK 204
KK
Sbjct: 168 KK 169
>gi|319404489|emb|CBI78096.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 181
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 118/184 (64%), Gaps = 7/184 (3%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL EVA G LPG HHF+ITF TNA G++IS L+K Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLEVAKAG-LPGNHHFFITFLTNAPGIKISPRLQKRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QF DL V + FEV LSF + E+LVIPFN+I+ FYDP FE FD+
Sbjct: 60 PDQMTIVLQHQFRDLSVSETAFEVTLSFGEITEKLVIPFNSIQVFYDPIAAFETAFDLPP 119
Query: 145 EHIEEKLEGGNTGKVLTSP-DNFDKNQTNSVSQDSSKKKSTKKQNKN---KMASVISLDN 200
I E N SP DK + ++S S K+ K+ + N + A ++SLD+
Sbjct: 120 SLISG--ENQNPETASCSPFTPSDKQKKENISTKISNLKTEKEPSNNDSKQSADIVSLDS 177
Query: 201 FRKK 204
FRKK
Sbjct: 178 FRKK 181
>gi|86749154|ref|YP_485650.1| hypothetical protein RPB_2031 [Rhodopseudomonas palustris HaA2]
gi|86572182|gb|ABD06739.1| Protein of unknown function DUF1321 [Rhodopseudomonas palustris
HaA2]
Length = 174
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/116 (60%), Positives = 94/116 (81%), Gaps = 1/116 (0%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA+EALRG+++ VL++VA G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDHIRYDVLAREALRGVLRQVLTDVAQHG-LPGEHHFFITFLSKADGVKLSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
PE+MT+++Q+QFWDL V ++ FEVGLSF +PERLV+PF++IK F+DPSV F L+F
Sbjct: 60 PEEMTVILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFSSIKSFFDPSVQFGLQF 115
>gi|240850874|ref|YP_002972274.1| hypothetical protein Bgr_13790 [Bartonella grahamii as4aup]
gi|240267997|gb|ACS51585.1| hypothetical protein Bgr_13790 [Bartonella grahamii as4aup]
Length = 181
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 114/184 (61%), Gaps = 7/184 (3%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VLSEV+ G LPG HHF+ITF TNA GV+IS L+ Y
Sbjct: 1 MVKDQIRYDILVQDALRGVIRKVLSEVSKAG-LPGNHHFFITFLTNAPGVKISPRLKNRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QF DL V + FEV LSF + E+LVIPF +I+ FYDP FE FD+
Sbjct: 60 PEQMTIVLQHQFRDLSVSETAFEVTLSFREITEKLVIPFTSIQVFYDPVAAFEAAFDLPS 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQ----TNSVSQDSSKKKSTKKQNKNKMASVISLDN 200
E N+ T+P Q T + Q+ S K + + + A V+SLD+
Sbjct: 120 NLTSG--ESENSENTSTTPITLSNTQKKENTLTKEQNFSTNKESSNSDTKQSADVVSLDS 177
Query: 201 FRKK 204
FRKK
Sbjct: 178 FRKK 181
>gi|319899136|ref|YP_004159229.1| hypothetical protein BARCL_0977 [Bartonella clarridgeiae 73]
gi|319403100|emb|CBI76658.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 181
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 114/182 (62%), Gaps = 3/182 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL EV G LPG HHF+ITF TNA G++IS L++ Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLEVGKAG-LPGNHHFFITFLTNAPGIKISPRLQERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QF DL V + FEV LSF + ERLVIPFN+I+ FYDP+ FE FD+
Sbjct: 60 PDQMTIVLQHQFRDLSVSETAFEVTLSFGEITERLVIPFNSIQVFYDPTAAFEAAFDLPS 119
Query: 145 EHIEEKLEGG-NTGKVLTSPDNFDKNQTNSVSQDSSKK-KSTKKQNKNKMASVISLDNFR 202
+ E NT P N K + S + KK K + + A ++SLD+FR
Sbjct: 120 NLTSGENESSENTSCTPVIPSNKQKKENVSTKLSNLKKDKEPSNSDSKQSADIVSLDSFR 179
Query: 203 KK 204
KK
Sbjct: 180 KK 181
>gi|254470422|ref|ZP_05083826.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211960733|gb|EEA95929.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 202
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 119/213 (55%), Gaps = 45/213 (21%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDI+ ++ALR V+ +L EV G LPGEHHFYI F T A GV+IS L++ Y
Sbjct: 1 MAEDLIRYDIIIQDALRSAVRKILVEVNRAG-LPGEHHFYIAFETTAPGVKISSRLKERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QFWDL++ ++ FEVGLSF VPE L +PF+AIKGF+DPSV F LEF
Sbjct: 60 PKEMTIVLQHQFWDLQITEHAFEVGLSFGGVPEHLYVPFSAIKGFFDPSVQFALEF---- 115
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQ---------------------------- 176
E G TG+ L + + +SV +
Sbjct: 116 -------EPGKTGEELPAEFRIAERDLDSVEEFHARLETAVEQAEEEEAKTASTAEDTAG 168
Query: 177 --DSSKKKSTKKQNKNK---MASVISLDNFRKK 204
+ K+KS + ++ A V+SLD FRKK
Sbjct: 169 DAEEDKEKSEADETSSEESGSAQVVSLDAFRKK 201
>gi|299131896|ref|ZP_07025091.1| protein of unknown function DUF1321 [Afipia sp. 1NLS2]
gi|298592033|gb|EFI52233.1| protein of unknown function DUF1321 [Afipia sp. 1NLS2]
Length = 174
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 110/181 (60%), Gaps = 8/181 (4%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+++ VLS+ A G LPG+HHFYITF + A GV++S L Y
Sbjct: 1 MATDLIRYDVLTRDALRGVLRRVLSDAAESG-LPGDHHFYITFLSTAEGVKLSPRLLSQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MT+++Q+QFWDL V ++HFEVGLSF +PERLV+PF+AI F+DPSV F L+F+
Sbjct: 60 PQEMTVILQHQFWDLVVTEDHFEVGLSFGGIPERLVVPFSAITRFFDPSVQFGLQFETAE 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQ-TNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
I G+ + D +S + + A V+ LD FRK
Sbjct: 120 AAI------GDAEPAAAEVEKADPPASPDSPDNPDDDGGGGGGDHPREGAQVVRLDRFRK 173
Query: 204 K 204
K
Sbjct: 174 K 174
>gi|154252888|ref|YP_001413712.1| hypothetical protein Plav_2446 [Parvibaculum lavamentivorans DS-1]
gi|154156838|gb|ABS64055.1| protein of unknown function DUF1321 [Parvibaculum lavamentivorans
DS-1]
Length = 160
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 114/180 (63%), Gaps = 20/180 (11%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D +RYD+LA++ALRG+V+ L ++A LPGEHHFYI+F T+A GV +S+ LRK Y
Sbjct: 1 MAEDQMRYDMLAQDALRGVVRRAL-KIARDEGLPGEHHFYISFRTDAPGVEVSEKLRKQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE++TIV+Q+QFW+L+V + F V L+F+ +PERLV+PF A++GF+DPSV F L+F
Sbjct: 60 PEEITIVLQHQFWNLEVNEERFSVDLTFNKIPERLVVPFAAVQGFFDPSVQFGLQF---- 115
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
++ G N K N T V++ S ++ V+SLD FRKK
Sbjct: 116 -QVQGVSAGTNVAK---------DNATGGVTEASKPEEPAP-----AAGDVVSLDAFRKK 160
>gi|298293049|ref|YP_003694988.1| hypothetical protein Snov_3094 [Starkeya novella DSM 506]
gi|296929560|gb|ADH90369.1| protein of unknown function DUF1321 [Starkeya novella DSM 506]
Length = 243
Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 70/117 (59%), Positives = 93/117 (79%), Gaps = 1/117 (0%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D IRYD+L ++ALR +V+ VL++VA G LPG+HH Y++F T A GVR+S L++ Y
Sbjct: 1 MSVDLIRYDLLVQDALRSVVRRVLTDVARDG-LPGDHHLYVSFDTRASGVRLSPRLKERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
PE+MTIV+Q+QFWDL V D FEVGLSF+ +PERL IPF A+KGF+DPSV F L+F+
Sbjct: 60 PEEMTIVLQHQFWDLIVSDQFFEVGLSFNGIPERLHIPFAALKGFFDPSVKFGLQFE 116
>gi|220920731|ref|YP_002496032.1| hypothetical protein Mnod_0697 [Methylobacterium nodulans ORS 2060]
gi|219945337|gb|ACL55729.1| protein of unknown function DUF1321 [Methylobacterium nodulans ORS
2060]
Length = 211
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 92/118 (77%), Gaps = 1/118 (0%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALR +V+ VL + A G L GEHHFY++F T+ GVRISQ LR+ Y
Sbjct: 1 MADDLIRYDLLVQDALRSVVRKVLGDAAREG-LAGEHHFYVSFRTDYPGVRISQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV 142
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL++PF A+ GF+DPSV F L+F++
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHAFEVGLSFSGVPERLLVPFEAVTGFFDPSVQFGLKFEL 117
>gi|170739400|ref|YP_001768055.1| hypothetical protein M446_1093 [Methylobacterium sp. 4-46]
gi|168193674|gb|ACA15621.1| protein of unknown function DUF1321 [Methylobacterium sp. 4-46]
Length = 208
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 92/118 (77%), Gaps = 1/118 (0%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALR +V+ VL + A G L GEHHFY++F T+ GVRISQ LR+ Y
Sbjct: 1 MADDLIRYDLLVQDALRSVVRKVLGDAARDG-LAGEHHFYVSFRTDYPGVRISQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV 142
P+ MTIV+Q+QFWDL V ++ FEVGLSFS +PERL++PF A+ GF+DPSV F L+F++
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHAFEVGLSFSGIPERLLVPFEAVTGFFDPSVQFGLKFEL 117
>gi|319408807|emb|CBI82464.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 182
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 114/183 (62%), Gaps = 7/183 (3%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL EVA G LPG HHF+ITF+T A V+IS L+ Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLEVAKAG-LPGNHHFFITFSTKAPAVKISSRLKSRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QF DL V + FEV LSF + E+L+IPF +I+ FYDP FE FD+
Sbjct: 60 PDQMTIVLQHQFRDLNVSETAFEVTLSFGEITEKLIIPFASIQVFYDPVAAFEAAFDLPA 119
Query: 145 EHIEEKLEGGNTGKVLTSPD-NFDKNQTNSV---SQDSSKKKSTKKQNKNKMASVISLDN 200
E E N +PD + +K +T + +Q+ + K + + A V+SLD+
Sbjct: 120 NLTSE--ENENPESAPHTPDISLNKQKTENELIKTQNPKRDKEPSNNDTKQSADVVSLDS 177
Query: 201 FRK 203
FRK
Sbjct: 178 FRK 180
>gi|148555628|ref|YP_001263210.1| hypothetical protein Swit_2716 [Sphingomonas wittichii RW1]
gi|148500818|gb|ABQ69072.1| protein of unknown function DUF1321 [Sphingomonas wittichii RW1]
Length = 163
Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 100/154 (64%), Gaps = 1/154 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I YD + +EALR +V VL EV G LPG+HHFYITF T +GV I ++L + +P++MT
Sbjct: 10 IPYDEIVQEALRAVVGRVLGEVEKAGGLPGDHHFYITFKTQGQGVDIPKHLAERFPDEMT 69
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IVIQN+FWDLKV + FEVGLSF+ VP RLVIPF A+ GF DP+VNF L+F + E
Sbjct: 70 IVIQNRFWDLKVRPDGFEVGLSFNQVPARLVIPFAAVTGFVDPAVNFALQFQAQADDAIE 129
Query: 150 KLEGGNTGKVLTSPDNFD-KNQTNSVSQDSSKKK 182
G SP ++ +N VS D ++KK
Sbjct: 130 DTGHSFAGNDAPSPPPAPVEDGSNVVSVDFTRKK 163
>gi|312115719|ref|YP_004013315.1| hypothetical protein Rvan_3012 [Rhodomicrobium vannielii ATCC
17100]
gi|311220848|gb|ADP72216.1| hypothetical protein Rvan_3012 [Rhodomicrobium vannielii ATCC
17100]
Length = 184
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 117/190 (61%), Gaps = 16/190 (8%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D I YD L EALRG+V+ VL V G +PG+HHFYITF T + GV +S+ L+ Y
Sbjct: 1 MPEDTIPYDDLVLEALRGVVRSVLLRVLKRG-IPGDHHFYITFDTRSPGVGLSKRLKDQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P +MTIV+Q+QFWDL V ++ FEV LSF+N+PERLVIPF+A++ F DPSV+F L
Sbjct: 60 PTEMTIVLQHQFWDLAVTEDRFEVRLSFNNIPERLVIPFSAVRIFQDPSVHFALGLRAS- 118
Query: 145 EHIEEKLEGGNTG-KVLTSP---------DNFDKNQTNSVSQDSSKKKSTKKQNKNKMAS 194
E +L + G ++ SP + D +Q ++ ++++ + + K A
Sbjct: 119 ---EGELAKADEGLSLVPSPLAEQEVQAIPHHDNSQPE-IAIEATEDEDDAAEKHRKTAE 174
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 175 VVSLDKFRKK 184
>gi|94498512|ref|ZP_01305068.1| hypothetical protein SKA58_04436 [Sphingomonas sp. SKA58]
gi|94422055|gb|EAT07100.1| hypothetical protein SKA58_04436 [Sphingomonas sp. SKA58]
Length = 158
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 99/154 (64%), Gaps = 6/154 (3%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I YD + +EALR +V VL EV G LPG HHFYITF T A V I ++L + +P++MT
Sbjct: 10 IPYDEIVQEALRAVVGRVLDEVQQTGGLPGTHHFYITFKTQAPDVDIPKHLVERFPDEMT 69
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+QN+FWDLKV D HFEV L+F+ V LVIPF+AI F DP+VNF L+F V + I E
Sbjct: 70 IVLQNKFWDLKVSDQHFEVSLTFNQVAAHLVIPFSAITAFVDPAVNFALQFQVQSDEIPE 129
Query: 150 KL-EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
E N G +T+ D +N V+ D KKK
Sbjct: 130 PHDEAENDGPQVTNEDG-----SNVVTVDFGKKK 158
>gi|121602746|ref|YP_989211.1| hypothetical protein BARBAKC583_0930 [Bartonella bacilliformis
KC583]
gi|120614923|gb|ABM45524.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 177
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 112/186 (60%), Gaps = 15/186 (8%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL E + G L G HHF+ITF TNA V+IS L+ Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLETSQAGPL-GNHHFFITFLTNAPEVQISDRLKNRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QF DL V + FEV L F +PE+LVIPF++I+ FYDP FE FD+
Sbjct: 60 PDQMTIVLQHQFKDLSVSETSFEVTLFFEEIPEKLVIPFSSIQVFYDPVAAFEAAFDLPS 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQ------TNSVSQDSSKKKSTKKQNKNKMASVISL 198
I E N+ L +P Q T + +D S S KQ+ A ++SL
Sbjct: 120 NLISG--ESENSENALHTPTTLSNEQKEENLFTKKIDKDPS--NSDTKQS----ADIVSL 171
Query: 199 DNFRKK 204
D+FRKK
Sbjct: 172 DSFRKK 177
>gi|326388385|ref|ZP_08209981.1| hypothetical protein Y88_3268 [Novosphingobium nitrogenifigens DSM
19370]
gi|326207117|gb|EGD57938.1| hypothetical protein Y88_3268 [Novosphingobium nitrogenifigens DSM
19370]
Length = 161
Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 99/154 (64%), Gaps = 2/154 (1%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGS-LPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I YD + +EALR +V VL +V + GS LPG HHFYITF T A GV I LR+ +P++M
Sbjct: 9 IPYDEIVQEALRAVVGRVLGQVEASGSVLPGNHHFYITFKTGAPGVSIPDRLRERFPDEM 68
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIV+QN+FWDL V D F VGLSFS +P LVIPF+AI F DP+V+F L+F I ++
Sbjct: 69 TIVLQNKFWDLNVTDTGFTVGLSFSQIPATLVIPFSAITAFVDPAVDFGLQFQA-IGDLD 127
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
++L V SP + +N V+ D +KK
Sbjct: 128 DELHEAAENDVPESPVTTADDGSNVVTVDFGRKK 161
>gi|288958773|ref|YP_003449114.1| hypothetical protein AZL_019320 [Azospirillum sp. B510]
gi|288911081|dbj|BAI72570.1| hypothetical protein AZL_019320 [Azospirillum sp. B510]
Length = 165
Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 105/180 (58%), Gaps = 15/180 (8%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M + +RYD + + ALRG+V+ L+EVA G LPG HHFY+TF T GV I L Y
Sbjct: 1 MPKEQLRYDRMVETALRGVVRDALTEVAERG-LPGNHHFYLTFRTGYPGVDIPDYLAGQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P +MTIV+Q Q++ L V D+HFEV LSF+NV ERLVIPF AI F DPSVNF L+F
Sbjct: 60 PNEMTIVLQFQYYGLDVTDDHFEVTLSFNNVHERLVIPFGAITTFADPSVNFALQF---- 115
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ L + +V T P + ++++ + K+ V++LD FRKK
Sbjct: 116 ----QPLAATESAEVATMPPRAAAERVEEKVEEAAPAEEPKR------GEVVALDAFRKK 165
>gi|85374742|ref|YP_458804.1| hypothetical protein ELI_09575 [Erythrobacter litoralis HTCC2594]
gi|84787825|gb|ABC64007.1| hypothetical protein ELI_09575 [Erythrobacter litoralis HTCC2594]
Length = 195
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 98/163 (60%), Gaps = 15/163 (9%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGS-LPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I YD + +EALR +V VL E+ GS LPG HHFYITF T A GV I QNLR+ +P++M
Sbjct: 38 IPYDEIVQEALRAVVGRVLGEIQETGSELPGSHHFYITFKTGAPGVDIPQNLRERFPDEM 97
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV------ 142
TIV+QN+FWDL V D F VGLSF+ VP +L IPF AI F DP+V+F L+F
Sbjct: 98 TIVLQNKFWDLNVTDEGFSVGLSFNQVPAQLAIPFAAITAFVDPAVDFGLQFQATVADMA 157
Query: 143 ---HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
H + ++ E G V S D +N V+ D KKK
Sbjct: 158 PEQHEDPENDEAEQGGGPAVSDSEDG-----SNVVTVDFGKKK 195
>gi|56552400|ref|YP_163239.1| hypothetical protein ZMO1504 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241761557|ref|ZP_04759644.1| protein of unknown function DUF1321 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260753922|ref|YP_003226815.1| hypothetical protein Za10_1697 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56543974|gb|AAV90128.1| protein of unknown function DUF1321 [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241373865|gb|EER63398.1| protein of unknown function DUF1321 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258553285|gb|ACV76231.1| protein of unknown function DUF1321 [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 163
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 97/154 (62%), Gaps = 1/154 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I YD + +EALR +V VL V + G LPG+HHFYITF T A GV + +L +PE+MT
Sbjct: 10 IPYDEIVQEALRAVVGRVLGTVQAEGGLPGDHHFYITFKTQASGVSVPPHLLARFPEEMT 69
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IVIQN+FWDL V +HF +GLSF +P LVIP++AI F DPSV+F L+F+ E + +
Sbjct: 70 IVIQNRFWDLVVESDHFSIGLSFGGIPSNLVIPYSAITNFVDPSVHFALQFEAQFEEVVD 129
Query: 150 KLEGGNTGKVLTSPDNFD-KNQTNSVSQDSSKKK 182
E + P+ + +N VS D S+KK
Sbjct: 130 SEENEPEPEKRPLPEAKPIEEGSNVVSVDFSRKK 163
>gi|87199027|ref|YP_496284.1| hypothetical protein Saro_1005 [Novosphingobium aromaticivorans DSM
12444]
gi|87134708|gb|ABD25450.1| protein of unknown function DUF1321 [Novosphingobium
aromaticivorans DSM 12444]
Length = 166
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 103/162 (63%), Gaps = 13/162 (8%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGS-LPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I YD + +EALR +V VL +V S G LPG HHFYITF T A GV I Q LR+ +P++M
Sbjct: 9 IPYDEIVQEALRAVVGRVLGQVESAGGVLPGTHHFYITFKTGAPGVDIPQRLRERFPDEM 68
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIV+QN+FWDLKV ++ F VGLSF+ +P L+IPF+AI F DP+V+F L+F ++ E
Sbjct: 69 TIVLQNKFWDLKVEEDRFTVGLSFNQIPSTLLIPFSAITAFVDPAVDFGLQFQAVVDDDE 128
Query: 149 -EKLEGGNTGKVLTSPDNFDK-------NQTNSVSQDSSKKK 182
E LE SP+ ++ + +N V+ D KKK
Sbjct: 129 VEPLEPAEN----DSPEQAERPAVERSDDGSNVVTVDFGKKK 166
>gi|209965295|ref|YP_002298210.1| hypothetical protein RC1_2004 [Rhodospirillum centenum SW]
gi|209958761|gb|ACI99397.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 157
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 107/180 (59%), Gaps = 23/180 (12%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ + +RYD + + ALRG+V+ L+EV G LPGEHHFY+TF T+ GV+I LR+ Y
Sbjct: 1 MSREPLRYDRMVENALRGVVREALTEVQEDG-LPGEHHFYVTFRTDGAGVKIPDYLREQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P +MTIV+Q QF+ L+V F LSF V ERLVIPF AI GF DPSVNF L+F
Sbjct: 60 PGEMTIVLQYQFYGLEVTPQGFSATLSFGGVHERLVIPFAAITGFADPSVNFGLKF---- 115
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ +E+ G D+ + ++D + + +++ +V++LD FRKK
Sbjct: 116 QGADEEASG------------EDEADGEAAAEDDTPAE------ESRTGTVVALDAFRKK 157
>gi|332187812|ref|ZP_08389546.1| hypothetical protein SUS17_2911 [Sphingomonas sp. S17]
gi|332012162|gb|EGI54233.1| hypothetical protein SUS17_2911 [Sphingomonas sp. S17]
Length = 161
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 102/175 (58%), Gaps = 23/175 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I YD + +EALR +V VL VA G LPG HHFYITF T A GV I Q L + +P++MT
Sbjct: 10 IPYDDIVQEALRAVVGRVLGPVAETGHLPGTHHFYITFKTQAPGVDIPQRLIERFPDEMT 69
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+QN+FWDL V +N F VGLSF+ VP +LVIP++AI F+DP V FEL F H+ +
Sbjct: 70 IVLQNRFWDLTVDENRFSVGLSFNQVPSKLVIPYSAITRFHDPEVQFELGF-----HVAD 124
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+G D + +S D K + ++V+++D RKK
Sbjct: 125 DPQG-------------DPDPHDSAENDEPVAKPVEDG-----SNVVAVDFKRKK 161
>gi|114570591|ref|YP_757271.1| hypothetical protein Mmar10_2041 [Maricaulis maris MCS10]
gi|114341053|gb|ABI66333.1| protein of unknown function DUF1321 [Maricaulis maris MCS10]
Length = 165
Score = 137 bits (346), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 104/180 (57%), Gaps = 15/180 (8%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D +RYD++A++ALRG+V+ L + + LPG HHFYITF T A GV I L + Y
Sbjct: 1 MAKDLMRYDLMAQDALRGVVRQALLKAGAPEGLPGPHHFYITFRTTAPGVDIDPTLLEKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+++QFWDL V + FEV L FS VP+ L +P++AI F+DPSV F L+F
Sbjct: 61 PEEMTIVLEHQFWDLNVTETGFEVTLKFSGVPKYLKMPYSAISRFHDPSVGFHLQF---- 116
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EH + E G F + + S S + A V+SLD+FRKK
Sbjct: 117 EHDGAEDEAG-----------FPDDDPKPKKGNKSGSGSASSGDGGDGAQVVSLDSFRKK 165
>gi|254292820|ref|YP_003058843.1| hypothetical protein Hbal_0444 [Hirschia baltica ATCC 49814]
gi|254041351|gb|ACT58146.1| protein of unknown function DUF1321 [Hirschia baltica ATCC 49814]
Length = 179
Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 113/178 (63%), Gaps = 12/178 (6%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D I Y L++ AL+G+++ L A SLPG HHFYITF T A G+ ++ ++ +PE+
Sbjct: 13 DLIGYKALSEAALKGVMREALRFAAKGESLPGGHHFYITFKTAAPGISMADAIKDRFPEE 72
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
MTIV+Q+Q+WDL+V D++FE+ L F VP+ LVIP+ A+ F+DPSVN+ L F++ +
Sbjct: 73 MTIVVQHQYWDLEVNDDNFEIVLKFGGVPQHLVIPYAAVTRFFDPSVNYGLVFEMGTTAL 132
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM-ASVISLDNFRKK 204
+EGG + + T +++ S++KS K +++ + +V+SLD FR+K
Sbjct: 133 ---IEGGQQIEF--------GDDTTEIAEAVSEEKSDKDKSEGEAEGTVVSLDAFRRK 179
>gi|83310429|ref|YP_420693.1| hypothetical protein amb1330 [Magnetospirillum magneticum AMB-1]
gi|82945270|dbj|BAE50134.1| Uncharacterized protein [Magnetospirillum magneticum AMB-1]
Length = 167
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 102/175 (58%), Gaps = 11/175 (6%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
+RYD + +EALRG+V+ L A G LPGEHHFYITF + V +S +L+ +P++MT
Sbjct: 4 LRYDKMVEEALRGVVRDSLHFAAEHG-LPGEHHFYITFRPHHPDVGMSDHLKARHPDEMT 62
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q+QFWDL V ++ F V LSFS PE +VIPF+A+ GF DPS F L+F +
Sbjct: 63 IVLQHQFWDLNVTEDGFSVTLSFSGKPETMVIPFSAVTGFADPSAKFGLQF--------Q 114
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ G + D FD + S+K + Q +V++LD FRKK
Sbjct: 115 AIPGDDDDDDDMEIDEFDPQPPRGAA--SAKDDEPEPQPPGGDGNVVALDKFRKK 167
>gi|103488625|ref|YP_618186.1| hypothetical protein Sala_3150 [Sphingopyxis alaskensis RB2256]
gi|98978702|gb|ABF54853.1| protein of unknown function DUF1321 [Sphingopyxis alaskensis
RB2256]
Length = 160
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 81/113 (71%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I YD + ++ALR +V VLS+V SLPGEHHFYITF T A GV I +L +P++MT
Sbjct: 10 IPYDEIVQDALRAVVGRVLSQVEGTDSLPGEHHFYITFKTQAPGVDIPAHLVAKFPDEMT 69
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV 142
IV+QN+FWDL V ++HF VGLSF+ P L+IP+ AI F DPSV+F L+F V
Sbjct: 70 IVLQNRFWDLTVEEDHFSVGLSFNQTPSTLIIPYAAITAFVDPSVDFGLQFQV 122
>gi|300021801|ref|YP_003754412.1| hypothetical protein Hden_0266 [Hyphomicrobium denitrificans ATCC
51888]
gi|299523622|gb|ADJ22091.1| protein of unknown function DUF1321 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 219
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L +EA+RG+V+ VL ++ G LPGEHHFYI+F T A G +S+ L++ YP +MT
Sbjct: 7 IDYAKLQQEAMRGVVRAVLQQIVKSG-LPGEHHFYISFLTQAPGAIVSKRLKEKYPSEMT 65
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
IV+Q++FWDL V D+ FEV L+F +PERLV+PF+AIK F DPSV + L+FD
Sbjct: 66 IVLQHRFWDLIVSDDRFEVKLTFDGIPERLVVPFSAIKVFIDPSVRYGLQFD 117
>gi|114797792|ref|YP_761633.1| hypothetical protein HNE_2955 [Hyphomonas neptunium ATCC 15444]
gi|114737966|gb|ABI76091.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 156
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 103/177 (58%), Gaps = 23/177 (12%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D+I Y+ L++ A+RG+V+ L + G LPGEHHFYI+F T A GV+I L + +PE+
Sbjct: 3 DYIGYEALSQAAMRGVVREALRRGKTNGGLPGEHHFYISFRTRAPGVKIPPQLVQRFPEE 62
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
MTIV+Q+Q+WDL+V + HFE+ L FS VP+ L IP AI F DPSVNF + F+
Sbjct: 63 MTIVVQHQYWDLEVHEGHFEIVLKFSGVPQHLSIPLAAITRFVDPSVNFGIAFES----- 117
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ + G + +P T + + + K + +V+SLD FR+K
Sbjct: 118 ----QSKDAGVIAPAP-------TAPIEEPAPTPKVAGE-------TVVSLDAFRRK 156
>gi|304321360|ref|YP_003855003.1| hypothetical protein PB2503_09039 [Parvularcula bermudensis
HTCC2503]
gi|303300262|gb|ADM09861.1| hypothetical protein PB2503_09039 [Parvularcula bermudensis
HTCC2503]
Length = 186
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 4/177 (2%)
Query: 32 YDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIV 91
Y L ALR +V+ VLS ++G PGEHHFYI F TNA+GV +S LR+ YPE+M IV
Sbjct: 10 YTFLELAALRNVVRDVLSITETLGHPPGEHHFYIGFLTNAKGVEMSDTLREQYPERMVIV 69
Query: 92 IQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKL 151
+Q+QF L+V + FEV L F VP+RL+IPF+AI F DPSVN+ +F V IE + E
Sbjct: 70 LQHQFEGLRVYADRFEVTLHFKGVPDRLIIPFDAIAEFADPSVNYSRQFPVAIEVLGETD 129
Query: 152 EGGNT--GKVLTSPDNFDKNQT--NSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
T G V DK++ + D ++ A ++S+D FRKK
Sbjct: 130 TAAPTVQGSVEPFTPRGDKSRPAHRDDNDDDGPDDDGPSGPQSGSADIVSIDRFRKK 186
>gi|296446562|ref|ZP_06888504.1| protein of unknown function DUF1321 [Methylosinus trichosporium
OB3b]
gi|296255916|gb|EFH03001.1| protein of unknown function DUF1321 [Methylosinus trichosporium
OB3b]
Length = 177
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 109/184 (59%), Gaps = 12/184 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D IRYD+L ++ALRG+++ VL++ A G LPG+HHF I+F T A GV+IS L + +
Sbjct: 1 MSTDLIRYDLLLQDALRGVMRKVLADAALAGRLPGDHHFTISFRTRAPGVKISSRLAEQW 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P +MTI++Q+Q+ +L V + F V LSF ++PE+L +PF A+ F DPSV F L+++V
Sbjct: 61 PHEMTIILQHQYSNLVVDERGFSVCLSFRSIPEQLYVPFEAVTVFSDPSVEFGLKWEVE- 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK----NKMASVISLDN 200
E ++ +P F + S+ K + + + A ++S+D
Sbjct: 120 -------EASSSAPRDETPAPFPTRPPGVAAVPSAPKPAKAAERAAPEGEEEAKIVSIDA 172
Query: 201 FRKK 204
FRKK
Sbjct: 173 FRKK 176
>gi|85710735|ref|ZP_01041799.1| hypothetical protein NAP1_09997 [Erythrobacter sp. NAP1]
gi|85687913|gb|EAQ27918.1| hypothetical protein NAP1_09997 [Erythrobacter sp. NAP1]
Length = 166
Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGS-LPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I YD + +EALR +V VL E+ GS LPG HHFYITF T A GV I +LR+ +P++M
Sbjct: 10 IPYDEIVQEALRAVVGRVLGEIERGGSELPGNHHFYITFKTGASGVSIPAHLRERFPDEM 69
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI- 147
TIV+QN+FWDL+V ++ F VGLSF+ +P +L IPF AI F DP+V+F L+F + +
Sbjct: 70 TIVLQNKFWDLEVREDGFTVGLSFNQIPAKLEIPFAAITAFVDPAVDFGLQFQASVSELA 129
Query: 148 -EEKLEGGNTGKVLTS-PDNFDKNQTNSVSQDSSKKK 182
EE + N +VL + + +N V+ D +KK
Sbjct: 130 PEEHEDAENDAEVLVQGDPDDGGDGSNVVTVDFGRKK 166
>gi|294011543|ref|YP_003545003.1| hypothetical protein SJA_C1-15570 [Sphingobium japonicum UT26S]
gi|292674873|dbj|BAI96391.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 158
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 93/153 (60%), Gaps = 4/153 (2%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I YD + +EALR +V VL E+ G LPG HHFYITF T A GV I ++L + +P++MT
Sbjct: 10 IPYDEIVQEALRAVVGRVLGEIERSGGLPGAHHFYITFKTQAAGVDIPRHLVERFPDEMT 69
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+QN+FWDLKV D+ F V L+F+ V L IPF AI F DP+VNF L+F + E
Sbjct: 70 IVLQNKFWDLKVSDDAFGVSLTFNQVAAHLHIPFAAITAFVDPAVNFALQFQAQADIAPE 129
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
E +P ++ +N V+ D KKK
Sbjct: 130 PHEEAEN----DAPQVMTEDGSNVVTVDFGKKK 158
>gi|315498760|ref|YP_004087564.1| stringent starvation protein b [Asticcacaulis excentricus CB 48]
gi|315416772|gb|ADU13413.1| Stringent starvation protein B [Asticcacaulis excentricus CB 48]
Length = 171
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 99/183 (54%), Gaps = 14/183 (7%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
DT DH+ Y L + ALRG+++ L + + LPG+HHFY+TF T A GV I +L
Sbjct: 3 DTPSVIDHMDYATLTQNALRGVIREALIKASHPHGLPGDHHFYVTFLTRAEGVTIPDDLL 62
Query: 82 KNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
K YP +TIV+Q+Q+ +LKV + V LSF VP+ L P +AI FYDPSV F LEFD
Sbjct: 63 KRYPRDITIVLQHQYRELKVDGDRISVTLSFGGVPKVLRFPLSAITRFYDPSVQFILEFD 122
Query: 142 VHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNF 201
V EE LE + ++ P + + D K + V+SLD F
Sbjct: 123 V-----EEPLEANDDEGLIAEP---------AAATDEGKPADPDTPPPDTGPKVVSLDQF 168
Query: 202 RKK 204
RKK
Sbjct: 169 RKK 171
>gi|302383259|ref|YP_003819082.1| stringent starvation protein B [Brevundimonas subvibrioides ATCC
15264]
gi|302193887|gb|ADL01459.1| Stringent starvation protein B [Brevundimonas subvibrioides ATCC
15264]
Length = 161
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 99/183 (54%), Gaps = 24/183 (13%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
D D + Y+ LA++ALRG+++ L AS G +PG HHFYITF T GV + ++
Sbjct: 3 DDAPPIDEMHYEKLAQDALRGVIRAALERAASPGGIPGAHHFYITFKTRGPGVSVPPDVV 62
Query: 82 KNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
YP++MT+V+Q+Q+WDL V + F V L F +P+ L +P+ A+ FYDPSV F L+F+
Sbjct: 63 AKYPDEMTVVLQHQYWDLAVEHDLFSVMLKFGGMPKVLTVPYTAVTRFYDPSVQFLLQFE 122
Query: 142 VHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNF 201
E + E V++ + K++ + + V+SLD F
Sbjct: 123 AP-EPVAE-----------------------PVAELPAPKRTEPSPSGDDGPKVVSLDQF 158
Query: 202 RKK 204
RKK
Sbjct: 159 RKK 161
>gi|46202069|ref|ZP_00053809.2| COG3814: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 169
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 101/177 (57%), Gaps = 9/177 (5%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
+ +RYD + +EALRG+V+ L A G LPGEHHFYITF + V ++ +L+ +P++
Sbjct: 2 EELRYDKMVEEALRGVVRDSLVFAAEHG-LPGEHHFYITFRPHHPDVEMADHLKARHPDE 60
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
MTIV+Q+QFWDL V ++ F V LSFS PE++VIPF+++ GF DPS F L+F
Sbjct: 61 MTIVLQHQFWDLFVTEDGFTVTLSFSGKPEKMVIPFSSVTGFADPSAKFGLQF------- 113
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ + G + D FD + + + + V++LD FRKK
Sbjct: 114 -QAIPGDDEDDDDMEVDAFDPQPPRGSASSTDDEPEPNPPGEGGDGKVVALDKFRKK 169
>gi|307294377|ref|ZP_07574221.1| hypothetical protein SphchDRAFT_1847 [Sphingobium chlorophenolicum
L-1]
gi|306880528|gb|EFN11745.1| hypothetical protein SphchDRAFT_1847 [Sphingobium chlorophenolicum
L-1]
Length = 158
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 94/153 (61%), Gaps = 4/153 (2%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I YD + +EALR +V VL E+ G LPG HHFYITF T A GV I ++L + +P++MT
Sbjct: 10 IPYDEIVQEALRAVVGRVLGEIERSGGLPGVHHFYITFKTQAVGVDIPRHLVERFPDEMT 69
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+QN+FWDLKV ++ F V L+F+ V L IPF AI F DP+VNF L+F + E
Sbjct: 70 IVLQNKFWDLKVSEDAFGVSLTFNQVAAHLHIPFAAITAFVDPAVNFALQFQAQADIAPE 129
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
E +P +++ +N V+ D KKK
Sbjct: 130 PHEEAEN----DAPQVTNEDGSNVVTVDFGKKK 158
>gi|323136054|ref|ZP_08071137.1| hypothetical protein Met49242DRAFT_0524 [Methylocystis sp. ATCC
49242]
gi|322399145|gb|EFY01664.1| hypothetical protein Met49242DRAFT_0524 [Methylocystis sp. ATCC
49242]
Length = 196
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 86/116 (74%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD++ ++A+RG+++ VLS+VA G LPG+HHF I+F T+A VRIS+ L + +
Sbjct: 1 MAQDLIRYDLVVQDAMRGVMRKVLSDVAKSGYLPGDHHFTISFRTDAPDVRISRRLAEQW 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
P ++TI++Q+Q+ +L+V D F V LSF ++PE L IPF A+ GF+DPSV F L F
Sbjct: 61 PHELTIILQHQYSNLEVDDEGFGVTLSFRSIPEHLYIPFAAVTGFFDPSVEFGLRF 116
>gi|295688735|ref|YP_003592428.1| hypothetical protein Cseg_1315 [Caulobacter segnis ATCC 21756]
gi|295430638|gb|ADG09810.1| protein of unknown function DUF1321 [Caulobacter segnis ATCC 21756]
Length = 161
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 98/177 (55%), Gaps = 24/177 (13%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D ++Y+ +A++ALRG+V+ L + A G LP HH YITF T A GV Q+L YP++
Sbjct: 9 DLMQYEAMAQDALRGVVRAALKKAAEPGGLPEPHHLYITFKTKAVGVSGPQDLLGKYPDE 68
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
MTIV+Q+Q+WDL ++ F V L F P+RL +P+ A+ FYDPSV F L+F E +
Sbjct: 69 MTIVLQHQYWDLAPGESSFSVTLKFGGQPKRLNVPYAAVTRFYDPSVQFALQF-ASPEIV 127
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E+ E P+ + +T S D K ++SLD FRKK
Sbjct: 128 EDDPE----------PEAEPEAKTPPPSGDEGPK-------------IVSLDQFRKK 161
>gi|149185605|ref|ZP_01863921.1| hypothetical protein ED21_21309 [Erythrobacter sp. SD-21]
gi|148830825|gb|EDL49260.1| hypothetical protein ED21_21309 [Erythrobacter sp. SD-21]
Length = 178
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 97/156 (62%), Gaps = 4/156 (2%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGS-LPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I YD + +EALR +V VL E+ GS LPG HHFYITF T+A GV I +L + +P++M
Sbjct: 22 IPYDTIVQEALRAVVGRVLGEIEQGGSELPGTHHFYITFKTHAPGVSIPAHLSERFPDEM 81
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIV+QN+FWDL V ++ F VGLSF+ +P L IP+ AI F DP+V+F L+F + +
Sbjct: 82 TIVLQNKFWDLNVREDGFSVGLSFNQIPAELDIPYAAITQFVDPAVDFGLQFQATVADMA 141
Query: 149 EKL--EGGNTGKVLTSPD-NFDKNQTNSVSQDSSKK 181
E GN + SP ++ +N V+ D +K
Sbjct: 142 PAPTDEAGNDEEQAESPPVEGAEDGSNVVTVDFGRK 177
>gi|296283283|ref|ZP_06861281.1| hypothetical protein CbatJ_06661 [Citromicrobium bathyomarinum
JL354]
Length = 170
Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 105/176 (59%), Gaps = 16/176 (9%)
Query: 30 IRYDILAKEALRGLVKVVLSEV-ASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I YD + +EALR +V VL E+ A G+LPG HHFYITF T GV I +LR+ +P++M
Sbjct: 10 IPYDQIVQEALRAVVGSVLGEIEAGGGTLPGNHHFYITFKTGVPGVEIPDHLRERFPDEM 69
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIV+QN+FWDL V + F VGLSF+ LV+PF+AI F DP+V+F L+F +E
Sbjct: 70 TIVLQNKFWDLNVTEVGFSVGLSFNQRSSHLVVPFSAITAFVDPAVDFGLQF--QATEVE 127
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ +P + N + ++ ++ TK ++ ++V+++D RKK
Sbjct: 128 D----------YPTPTDAAGNDGSDDAERDPREAVTKNEDG---SNVVTVDFGRKK 170
>gi|163793370|ref|ZP_02187345.1| hypothetical protein BAL199_02644 [alpha proteobacterium BAL199]
gi|159181172|gb|EDP65687.1| hypothetical protein BAL199_02644 [alpha proteobacterium BAL199]
Length = 158
Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 99/180 (55%), Gaps = 23/180 (12%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D RYD++ + ALRG+V+ L + G LPG HHFY+TF T A GV I L + Y
Sbjct: 1 MAEDLFRYDLMVENALRGVVRDALRRALNHG-LPGNHHFYLTFKTRAPGVEIPSYLIERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q Q+W+L+V D F V LSF+++ ERLV+P+ A+ GF DPSV F L+F
Sbjct: 60 PDEMTIVLQFQYWNLEVEDQRFSVMLSFNDIRERLVVPYEALTGFADPSVQFGLQFQ--- 116
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+G +G + PD + + V+SLD+FRKK
Sbjct: 117 -------DGSASGSGDSDPDP------------TPPEGGGDAPADGGSGEVVSLDHFRKK 157
>gi|329849449|ref|ZP_08264295.1| hypothetical protein ABI_23420 [Asticcacaulis biprosthecum C19]
gi|328841360|gb|EGF90930.1| hypothetical protein ABI_23420 [Asticcacaulis biprosthecum C19]
Length = 181
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQN 79
D ++ D + Y L + ALRG+++ L AS LPGEHHFY+TF T GV + ++
Sbjct: 1 MTDDQISSDLMDYASLTQNALRGVIRQALQRAASPQGLPGEHHFYVTFLTRGSGVSVPED 60
Query: 80 LRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
L YP +TIV+Q+Q+ DL+V D+ F V L+F P+ L +P+ AI F+DP F LE
Sbjct: 61 LLARYPYDITIVLQHQYRDLRVADDFFRVTLTFGGAPKVLTVPYAAITRFHDPFAQFMLE 120
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
F+V E + + +L + + S +S+ K T + + VISLD
Sbjct: 121 FEV--EDSRALTQDTDPADMLDDGSEPEVAAPDLASPAASEAKET--EAPDDAPKVISLD 176
Query: 200 NFRKK 204
+FRKK
Sbjct: 177 HFRKK 181
>gi|167647321|ref|YP_001684984.1| hypothetical protein Caul_3359 [Caulobacter sp. K31]
gi|167349751|gb|ABZ72486.1| protein of unknown function DUF1321 [Caulobacter sp. K31]
Length = 161
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 86/153 (56%), Gaps = 11/153 (7%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D ++Y+ +A++ALRG+VK L + A+ G LP HH YITF T A GV Q+L YP++
Sbjct: 9 DLMQYEAMAQDALRGVVKAALRKAAAPGGLPEPHHLYITFKTQAAGVSGPQDLLGKYPDE 68
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF------- 140
MTI++Q+Q+WDL + F V L F P+RL +P+ A+ FYDPSV F L+F
Sbjct: 69 MTIILQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAAVTRFYDPSVQFALQFEAPEIAP 128
Query: 141 ----DVHIEHIEEKLEGGNTGKVLTSPDNFDKN 169
+ EGG+ + S D F K
Sbjct: 129 PAPEPEPEPELSAPTEGGDDAPKIISLDQFRKK 161
>gi|197104332|ref|YP_002129709.1| hypothetical protein PHZ_c0866 [Phenylobacterium zucineum HLK1]
gi|196477752|gb|ACG77280.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 163
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 76/114 (66%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D + Y+ LA++ALRG+VK L A+ LPG HHFYITF T+A GV +L YP++
Sbjct: 9 DLMNYEALAQDALRGVVKAALKRAAAPEGLPGAHHFYITFKTDAAGVSGPADLLSKYPDE 68
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
MTIV+Q+Q+WDL + F V L F P+RL IP+ A+ FYDPSV F L+F+
Sbjct: 69 MTIVLQHQYWDLAPGETFFSVTLQFGGQPKRLSIPYAAVTRFYDPSVQFLLQFE 122
>gi|329889829|ref|ZP_08268172.1| hypothetical protein BDIM_15200 [Brevundimonas diminuta ATCC 11568]
gi|328845130|gb|EGF94694.1| hypothetical protein BDIM_15200 [Brevundimonas diminuta ATCC 11568]
Length = 155
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 95/175 (54%), Gaps = 20/175 (11%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
+ Y+ LA++ALRG++++ L A +PG HHFYITF T GV + ++ YP++MT
Sbjct: 1 MHYEQLAQDALRGVIRLALERAAEPEGIPGAHHFYITFKTRGAGVSVPPDVLAKYPDEMT 60
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+Q+WDL V + F V L F P+ L +P++A+ FYDPSV F L+FD E +E
Sbjct: 61 VVLQHQYWDLAVEPDLFSVMLKFGGAPKVLTVPYSAVVRFYDPSVQFLLQFD-EPEIVEA 119
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
++ SP D + D K V+SLD FRKK
Sbjct: 120 EI-------APLSPPARDPDAAPPQPSDDDGPK------------VVSLDQFRKK 155
>gi|254419893|ref|ZP_05033617.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
gi|196186070|gb|EDX81046.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
Length = 156
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 100/185 (54%), Gaps = 33/185 (17%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
D D ++Y+ LA EALRG+++ L V + G LPG HHFYITF T A GV I ++
Sbjct: 3 DQTPPVDEMQYERLAHEALRGVIRSALDHVLAEG-LPGAHHFYITFKTRAAGVSIPPDML 61
Query: 82 KNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
YP++MT+V+Q+Q+ DL+V + F V L F VP L +P++A+ FYDPSV F L+FD
Sbjct: 62 AKYPDEMTVVLQHQYEDLQVEADRFSVKLRFGGVPRTLAMPYSAVTRFYDPSVQFLLQFD 121
Query: 142 VH--IEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
+E +EE T P++ + D K V+SLD
Sbjct: 122 EPEIVEAVEEA----------TPPED------PTPGSDGPK--------------VVSLD 151
Query: 200 NFRKK 204
FRKK
Sbjct: 152 QFRKK 156
>gi|83858887|ref|ZP_00952409.1| hypothetical protein OA2633_05271 [Oceanicaulis alexandrii
HTCC2633]
gi|83853710|gb|EAP91562.1| hypothetical protein OA2633_05271 [Oceanicaulis alexandrii
HTCC2633]
Length = 152
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 78/114 (68%), Gaps = 1/114 (0%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D ++Y+ LA+EALR +V+ L A G LPG HHFYITF T+ G I ++L YPE+
Sbjct: 6 DLMQYEQLAQEALRDVVRKSLERAAGDG-LPGAHHFYITFRTSDPGCDIDESLASAYPEE 64
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
MTIV+++QFWDL+V D FEV L F VP+ L +P+ A+ F+DPSV F L FD
Sbjct: 65 MTIVLEHQFWDLEVDDAGFEVTLKFGGVPKYLKVPWRAVTRFHDPSVGFRLHFD 118
>gi|260433819|ref|ZP_05787790.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417647|gb|EEX10906.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 155
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 102/175 (58%), Gaps = 25/175 (14%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL+K VL V+ G LPG HHF+ITF T GV ++ LR+ YP++MT
Sbjct: 5 IDYGNLMHTAMRGLIKTVLQGVSETG-LPGSHHFFITFDTRTPGVELADWLRQRYPDEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q+ F +L V D+ F + L+F + PE L IPF+AI+ F DPSV F L F+
Sbjct: 64 IVVQHWFENLAVDDDGFAITLNFGDSPEPLYIPFSAIQTFVDPSVEFGLRFE-------- 115
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
SP++ D+ +T +D S + + + ++ A ++SLD+FRK+
Sbjct: 116 ------------SPEDEDELET---VEDVSIEVEAEDEPQHD-ADIVSLDSFRKQ 154
>gi|83593540|ref|YP_427292.1| hypothetical protein Rru_A2205 [Rhodospirillum rubrum ATCC 11170]
gi|83576454|gb|ABC23005.1| Protein of unknown function DUF1321 [Rhodospirillum rubrum ATCC
11170]
Length = 196
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 75/118 (63%), Gaps = 1/118 (0%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
+H YD + ++ALRG+++ L +V LPG HHFYITF T+ GV +S LR +P+
Sbjct: 25 EHFAYDRMVEQALRGVLREAL-KVTERQGLPGAHHFYITFHTSHPGVVLSPRLRSQHPDA 83
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
MTIV+QNQFWDL V D+ F V LSF + E L IPF A+ F DP F L+F +E
Sbjct: 84 MTIVLQNQFWDLAVDDDLFSVSLSFGGIRELLTIPFEAVTAFADPHATFGLQFQGALE 141
>gi|126726404|ref|ZP_01742245.1| hypothetical protein RB2150_01849 [Rhodobacterales bacterium
HTCC2150]
gi|126704267|gb|EBA03359.1| hypothetical protein RB2150_01849 [Rhodobacterales bacterium
HTCC2150]
Length = 178
Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 103/175 (58%), Gaps = 12/175 (6%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I Y L +A+RGLV +L +V + G LPG+HHF++TF T +GV + LR+ YPE++
Sbjct: 16 QIDYARLMHDAMRGLVANLLRDVLANG-LPGDHHFFVTFNTQEKGVVMPDWLRERYPEEI 74
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIVIQ+++ DL V +N F + L F P L +PF AI F DPSV F L+FD E+ +
Sbjct: 75 TIVIQHEYEDLGVQENGFRIVLQFGGTPVALYVPFMAISTFVDPSVEFGLKFDHSDENDD 134
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E +E ++ + DN + +++D + ++ K A ++SLD FRK
Sbjct: 135 EIME------IVENDDNVETIPEAPMAKDVVEDEAPKHD-----AEIVSLDQFRK 178
>gi|16126341|ref|NP_420905.1| hypothetical protein CC_2102 [Caulobacter crescentus CB15]
gi|221235124|ref|YP_002517560.1| hypothetical protein CCNA_02187 [Caulobacter crescentus NA1000]
gi|13423587|gb|AAK24073.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220964296|gb|ACL95652.1| hypothetical protein CCNA_02187 [Caulobacter crescentus NA1000]
Length = 162
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 76/115 (66%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D ++Y+ +A++ALRG+VK L + A+ G LP HH YITF T A GV Q+L YP++
Sbjct: 9 DLMQYEAMAQDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQDLLSKYPDE 68
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV 142
MTIV+Q+Q+WDL + F V L F P+RL +P+ A+ FYDPSV F L+F
Sbjct: 69 MTIVLQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAALTRFYDPSVQFALQFSA 123
>gi|23008550|ref|ZP_00049949.1| COG3814: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 105
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFYI+F T A GVR+SQ LR+ Y
Sbjct: 1 MAEDLIRYDLLVQDALRGVVRKVLTDAARDG-LSGEHHFYISFRTEAPGVRMSQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNV 115
P+ MTIV+Q+QFWDL V ++ FEVGLSFS
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHSFEVGLSFSGC 90
>gi|158429803|pdb|2QAS|A Chain A, Crystal Structure Of Caulobacter Crescentus Sspb Ortholog
Length = 157
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 76/115 (66%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D ++Y+ +A++ALRG+VK L + A+ G LP HH YITF T A GV Q+L YP++
Sbjct: 12 DLMQYEAMAQDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQDLLSKYPDE 71
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV 142
MTIV+Q+Q+WDL + F V L F P+RL +P+ A+ FYDPSV F L+F
Sbjct: 72 MTIVLQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAALTRFYDPSVQFALQFSA 126
>gi|218661031|ref|ZP_03516961.1| hypothetical protein RetlI_16463 [Rhizobium etli IE4771]
Length = 126
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 63/73 (86%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVATTGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFW 97
PE+MTIVIQ+QFW
Sbjct: 61 PEQMTIVIQHQFW 73
>gi|158429805|pdb|2QAZ|A Chain A, Structure Of C. Crescentus Sspb Ortholog
gi|158429806|pdb|2QAZ|B Chain B, Structure Of C. Crescentus Sspb Ortholog
gi|158429807|pdb|2QAZ|C Chain C, Structure Of C. Crescentus Sspb Ortholog
gi|158429808|pdb|2QAZ|D Chain D, Structure Of C. Crescentus Sspb Ortholog
Length = 128
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 76/115 (66%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D ++Y+ +A++ALRG+VK L + A+ G LP HH YITF T A GV Q+L YP++
Sbjct: 12 DLMQYEAMAQDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQDLLSKYPDE 71
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV 142
MTIV+Q+Q+WDL + F V L F P+RL +P+ A+ FYDPSV F L+F
Sbjct: 72 MTIVLQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAALTRFYDPSVQFALQFSA 126
>gi|114328472|ref|YP_745629.1| hypothetical protein GbCGDNIH1_1808 [Granulibacter bethesdensis
CGDNIH1]
gi|114316646|gb|ABI62706.1| hypothetical protein GbCGDNIH1_1808 [Granulibacter bethesdensis
CGDNIH1]
Length = 231
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 96/184 (52%), Gaps = 10/184 (5%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
+ YD ++ALR +V L VA+ G +P HHFYITF T+ GV I L+ YP +MT
Sbjct: 47 LPYDEWTEQALRQVVARALEHVANDG-MPEGHHFYITFRTDYFGVSIPSRLKAQYPHEMT 105
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q+QFWDL V + F VGLSF V L IPF A+ GF DP V L F E
Sbjct: 106 IVLQHQFWDLAVGPDSFSVGLSFGGVASTLRIPFAALLGFADPHVGVGLRFQADEPGDEN 165
Query: 150 K---------LEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDN 200
+G +GK+ T P + + T S + ++++ + V+SLD
Sbjct: 166 ASEDERDDEAEDGSESGKLATFPGSAAASSTASPATAEGEQENEDSASAQSAPQVVSLDA 225
Query: 201 FRKK 204
FR++
Sbjct: 226 FRRR 229
>gi|163735111|ref|ZP_02142547.1| hypothetical protein RLO149_22845 [Roseobacter litoralis Och 149]
gi|161391569|gb|EDQ15902.1| hypothetical protein RLO149_22845 [Roseobacter litoralis Och 149]
Length = 175
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 109/203 (53%), Gaps = 28/203 (13%)
Query: 1 MVSLWNFFSSRWQWFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGE 60
M++ FF+SR + + + ID Y L EA+RGL++ VL +V G LPGE
Sbjct: 1 MLATEEFFASRNK---MTRSID---------YGNLMHEAMRGLIRKVLLDVCDNG-LPGE 47
Query: 61 HHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLV 120
HHF+ITF T ++ L YP +MT+V+Q+ + +L+V D F V L+F + PE L
Sbjct: 48 HHFFITFDTGHPDAELADWLFDRYPGEMTVVMQHWYDNLEVTDEGFSVTLNFGDAPEPLY 107
Query: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
IP++AIK F DPSV F L F+ + EE +P T+ V + ++
Sbjct: 108 IPYDAIKTFVDPSVEFGLRFETQSDEDEE-----------AAPSQL--PATSQVEKPDTE 154
Query: 181 KKSTKKQNKNKMASVISLDNFRK 203
K T K+ A ++SLD+FRK
Sbjct: 155 KAETDDGAKD--AEIVSLDSFRK 175
>gi|254438302|ref|ZP_05051796.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
gi|198253748|gb|EDY78062.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
Length = 156
Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 97/178 (54%), Gaps = 33/178 (18%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L +A+RGL+ VL++V + G LPG HHF+ITF T GV I+ L YP +MT
Sbjct: 8 IDYGNLMHKAMRGLILEVLTDVCAKG-LPGNHHFFITFDTMHPGVEIADWLSDRYPGEMT 66
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IVIQ+Q+ L+V D F + LSF + PE L +P++AIK F DPSV F L F E
Sbjct: 67 IVIQHQYESLRVTDQGFSITLSFGDKPEPLYVPYDAIKTFVDPSVEFGLRF-------EA 119
Query: 150 KLEGGNTGK----VLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ E G+ + V+ P+ +D+ KK A V+SLD FRK
Sbjct: 120 QDEDGDAPEAPMDVMAEPE-----------KDAPKKD----------ADVVSLDQFRK 156
>gi|254511476|ref|ZP_05123543.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
gi|221535187|gb|EEE38175.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
Length = 155
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 98/174 (56%), Gaps = 23/174 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL+K VL+ V+ G LPG HHF+IT T GV ++ LR+ YP++MT
Sbjct: 5 IDYGNLMHTAMRGLIKTVLTGVSETG-LPGAHHFFITLDTQHEGVELADWLRERYPDEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q+ F +L+V +N F + L+F + PE L IP+ AIK F DPSV F L F+
Sbjct: 64 IVMQHWFENLEVGENGFAITLNFGDAPEPLYIPYLAIKTFVDPSVEFGLRFE-------- 115
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
P+ D+++ ++ ++ + ++ A V+SLD+FRK
Sbjct: 116 ------------GPE--DEDEDIHLTDEAPIEVDVEEPEPQHDADVVSLDSFRK 155
>gi|144897726|emb|CAM74590.1| protein containing DUF1321 [Magnetospirillum gryphiswaldense MSR-1]
Length = 163
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 1/116 (0%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D +RYD + ++ALRG+V+ L+ A G L G+HHFYITF T G+ + ++ +
Sbjct: 1 MSEDTLRYDKMVEDALRGVVREALTITARDG-LFGDHHFYITFRTRFPGIGMGDHILARH 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
PE+MTIV+Q+QFW L+V + F V LSFS E L++PF A+ GF DPS F L+F
Sbjct: 60 PEEMTIVLQHQFWGLEVDETFFRVTLSFSGKSETLIVPFAAVTGFADPSAKFGLQF 115
>gi|294678349|ref|YP_003578964.1| hypothetical protein RCAP_rcc02828 [Rhodobacter capsulatus SB 1003]
gi|294477169|gb|ADE86557.1| protein of unknown function DUF1321 [Rhodobacter capsulatus SB
1003]
Length = 153
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL+EVA G LPG HHF+ITF T A V ++ L+ YPE+MT
Sbjct: 5 IDYGTLMHRAMRGLIQTVLTEVAEHG-LPGAHHFFITFDTRAPKVEMADWLKSRYPEEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
IVIQ+ F +L V D F + L+F N PE LVIPF+A+ F DPSV F L F
Sbjct: 64 IVIQHWFDNLVVTDEGFSITLNFGNQPEPLVIPFDAVHTFVDPSVEFGLRF 114
>gi|159044876|ref|YP_001533670.1| hypothetical protein Dshi_2333 [Dinoroseobacter shibae DFL 12]
gi|157912636|gb|ABV94069.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 175
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 97/169 (57%), Gaps = 11/169 (6%)
Query: 39 ALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWD 98
A+R L++ VL EVA+ G LPGEHHF+ITF T GV +S LR+ YP++MTIV+Q+ F
Sbjct: 14 AMRALIQDVLREVAADG-LPGEHHFFITFDTQHPGVELSDWLRERYPDEMTIVLQHWFDG 72
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG- 157
L+V + F V L+F + PE L +P +AI+ F DPSV F L F+ + E E
Sbjct: 73 LEVREADFSVVLNFGDQPEALTVPLDAIRTFVDPSVEFGLRFETQDDADFEDEEDDEEET 132
Query: 158 ---KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
L P ++ ++K + KK +K A ++SLD+FRK
Sbjct: 133 HEVTALVPPPEARPHKP------TAKDTTEKKPGTSKDAEIVSLDSFRK 175
>gi|84503521|ref|ZP_01001572.1| hypothetical protein OB2597_03439 [Oceanicola batsensis HTCC2597]
gi|84388011|gb|EAQ01059.1| hypothetical protein OB2597_03439 [Oceanicola batsensis HTCC2597]
Length = 167
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 99/174 (56%), Gaps = 11/174 (6%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL++VA G LPG HHF+ITF T R++ LR YP +MT
Sbjct: 5 IDYGNLMHRAMRGLIQEVLADVADNG-LPGNHHFFITFDTTHEDARLADWLRDRYPREMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ F +L V D+ F + L+F + PERL IP+++I F DPSV F L F+ + E
Sbjct: 64 VVLQHWFDNLVVGDDGFGISLNFGDSPERLFIPYDSILTFVDPSVEFGLRFETQDQ--ES 121
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ E L + D+ +T ++ + +++ + A V+ LD FRK
Sbjct: 122 EAEDAEASPPLRA--RRDEPET------EAEADAAGDEDEAQDAEVVQLDKFRK 167
>gi|86139918|ref|ZP_01058483.1| hypothetical protein MED193_02785 [Roseobacter sp. MED193]
gi|85823336|gb|EAQ43546.1| hypothetical protein MED193_02785 [Roseobacter sp. MED193]
Length = 158
Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 96/174 (55%), Gaps = 21/174 (12%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL +VA G LPG HHF+ITF TN +++ LR YP MT
Sbjct: 5 IDYGNLMHSAMRGLIRTVLQDVADKG-LPGNHHFFITFDTNHPDAQLADWLRDRYPGAMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ + +L+V ++ F + L+F + PE L IP++AI+ F DPSV F L F E EE
Sbjct: 64 VVMQHWYDNLEVGEDGFGITLNFGDAPEPLYIPYDAIETFVDPSVEFGLRF----EAAEE 119
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ G+ D D + D +K+ S V+SLD+FRK
Sbjct: 120 SDDEGD--------DTVDHLDDEDEAADVAKRPSE--------GDVVSLDSFRK 157
>gi|114767550|ref|ZP_01446304.1| hypothetical protein 1100011001349_R2601_23388 [Pelagibaca
bermudensis HTCC2601]
gi|114540403|gb|EAU43489.1| hypothetical protein R2601_23388 [Roseovarius sp. HTCC2601]
Length = 158
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 75/113 (66%), Gaps = 1/113 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL+ VL++VA G LPGEHHF+ITF T V ++ L YP +MT
Sbjct: 5 IDYGNLMHRAMRGLIHDVLTDVAERG-LPGEHHFFITFDTQYPDVELADWLSDRYPGEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV 142
+V+Q++F DL+V ++ F V LSF PERL IP++AIK F DPSV F L F+
Sbjct: 64 VVLQHRFDDLEVGEDGFAVTLSFGEAPERLYIPYHAIKTFVDPSVEFGLRFET 116
>gi|84684762|ref|ZP_01012662.1| hypothetical protein 1099457000245_RB2654_02599 [Maritimibacter
alkaliphilus HTCC2654]
gi|84667097|gb|EAQ13567.1| hypothetical protein RB2654_02599 [Rhodobacterales bacterium
HTCC2654]
Length = 168
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 98/174 (56%), Gaps = 14/174 (8%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L +A+R L++ VLS+VA G LPG HHF+ITF T V ++ L +PE MT
Sbjct: 9 IDYGNLMHDAMRSLIRQVLSDVAENG-LPGAHHFFITFDTMHPEVELADWLSDRFPEDMT 67
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ F DL V ++ F V L+F + PER+ IPF+AI+ F DPSV F L F+ + +E
Sbjct: 68 VVMQHWFEDLDVTEDGFAVTLNFGDNPERMYIPFDAIRTFVDPSVEFGLRFETQDDDDDE 127
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + P ++++ K KS K A V+SLD+FRK
Sbjct: 128 EDGVADIEDAPARP--------VREAREADKGKSAPKD-----AEVVSLDSFRK 168
>gi|84517087|ref|ZP_01004443.1| hypothetical protein SKA53_03504 [Loktanella vestfoldensis SKA53]
gi|84508982|gb|EAQ05443.1| hypothetical protein SKA53_03504 [Loktanella vestfoldensis SKA53]
Length = 165
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 91/174 (52%), Gaps = 23/174 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL VA G LPG HHF++TF T V I+ L YP +MT
Sbjct: 15 IDYGNLMHRAMRGLIQQVLENVAKTG-LPGNHHFFVTFDTMHPDVEIADWLSDRYPGEMT 73
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+VIQ+ F +L V D F + L+F + PE L IP++AIK F DPSV F L F+ E
Sbjct: 74 VVIQHWFANLDVTDEGFTITLNFGDNPETLYIPYDAIKTFVDPSVEFGLRFETQDE---- 129
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
P + + +++ K + +K+ A V+SLD FRK
Sbjct: 130 -------------PTAITEAPMHEMAEPDDTKPAARKE-----AEVVSLDKFRK 165
>gi|58039869|ref|YP_191833.1| hypothetical protein GOX1426 [Gluconobacter oxydans 621H]
gi|58002283|gb|AAW61177.1| Hypothetical protein GOX1426 [Gluconobacter oxydans 621H]
Length = 191
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 92/178 (51%), Gaps = 13/178 (7%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
+ YD ++A R ++ + VA+ G LPG HHFY+TF TN V I LR YPE+MT
Sbjct: 21 LPYDDWVEDAYREVMLRAIEHVAAEG-LPGAHHFYLTFRTNRPDVIIPARLRAQYPEEMT 79
Query: 90 IVIQNQFWDLKVLD---NHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEH 146
IV+Q+QFWDL LD N VGLSF V L IP NAI F DP + L F
Sbjct: 80 IVLQHQFWDL-ALDREKNVISVGLSFGGVGSILCIPVNAITAFADPHIRMALRFSHSPLE 138
Query: 147 IEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+E +E + PD+ D V +++ + KK A V+SL FRK+
Sbjct: 139 EDEDVE---IPEGAVEPDDIDPAHHPEVQPETTSSEDVKKD-----AEVVSLAAFRKR 188
>gi|254465094|ref|ZP_05078505.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
gi|206686002|gb|EDZ46484.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
Length = 155
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 95/174 (54%), Gaps = 23/174 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL ++A G LPG HHF+ITF T V ++ L YP +MT
Sbjct: 5 IDYGNLMHTAMRGLIRTVLQDIAENG-LPGNHHFFITFDTAHPDVELADWLSDRYPGEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ F +L V D F V L+F + PE L IP++AI+ F DPSV F L F E EE
Sbjct: 64 VVMQHWFDNLTVDDEGFAVTLNFGDSPEPLYIPYDAIRTFVDPSVEFGLRF----ESAEE 119
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E + QD+++ + +K+N A ++SLD+FRK
Sbjct: 120 DSES--------------YAADDDEEQDTARVPAEEKKN----ADIVSLDSFRK 155
>gi|99081291|ref|YP_613445.1| hypothetical protein TM1040_1450 [Ruegeria sp. TM1040]
gi|99037571|gb|ABF64183.1| protein of unknown function DUF1321 [Ruegeria sp. TM1040]
Length = 159
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 90/174 (51%), Gaps = 19/174 (10%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL +VA G LPG HHF+ITF T+ ++ L YP +MT
Sbjct: 5 IDYGNLMHRAMRGLIRNVLDDVAEHG-LPGAHHFFITFDTSHPDAELADWLSDRYPGEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ F +L V D F V L+F + PE L IP++AIK F DPSV F L F+ E +E
Sbjct: 64 VVMQHWFDNLNVTDEGFSVTLNFGDAPEPLYIPYDAIKTFVDPSVEFGLRFESANEDDDE 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ V+ D + K A V+SLD+FRK
Sbjct: 124 DM------------------PPIEVASDMQDVEEDDAPAAKKDADVVSLDSFRK 159
>gi|255264033|ref|ZP_05343375.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
gi|255106368|gb|EET49042.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
Length = 154
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 94/152 (61%), Gaps = 2/152 (1%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L +A+RGL++ VL++VA+ G LPG+HHF+ITF T V I+ L YP++M
Sbjct: 5 IDYGNLMHQAMRGLIQNVLNDVAANG-LPGDHHFFITFDTMHPDVEIADWLSDRYPDEMM 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ + +L V ++ F V L+F + PE L IP++AIK F DPSV F L F+ + + +
Sbjct: 64 VVMQHWYDNLDVTNDGFSVTLNFGDTPEPLYIPYDAIKTFVDPSVEFGLRFESQDDELPD 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKK 181
+ E +++ PD+ + VS DS +K
Sbjct: 124 EHEAP-MDEMVEEPDDDAPQEAEIVSLDSFRK 154
>gi|294084291|ref|YP_003551049.1| hypothetical protein SAR116_0722 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292663864|gb|ADE38965.1| hypothetical protein SAR116_0722 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 163
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 93/175 (53%), Gaps = 24/175 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
+ Y++L ++ALR +V+ L +A LPG+ HFYI+F T+ GV ++ +L+ +P+ MT
Sbjct: 11 LNYELLVEDALRSVVRGSLL-IAQKAGLPGDTHFYISFKTDYPGVELADDLKIKHPDIMT 69
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q+Q+ DL+V D+ F V L F P +++PF ++ GF DPSV F L+F
Sbjct: 70 IVLQHQYADLEVDDDSFSVTLFFGGKPSPMIVPFASVTGFNDPSVGFGLQFGT------- 122
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
D++ + D S + + + A V+SLD FR +
Sbjct: 123 ----------------LDEDNEDLGDSDQSSPDAKAENGEETTADVVSLDTFRNR 161
>gi|260428183|ref|ZP_05782162.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260422675|gb|EEX15926.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 157
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL+ VL++V + G LPGEHHF+ITF T V ++ L YP +MT
Sbjct: 5 IDYGNLMHRAMRGLIHDVLTDVMNRG-LPGEHHFFITFDTQHPDVELADWLSDRYPGEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
+V+Q++F DL+V + F V LSF PERL IP++AIK F DPSV F L F
Sbjct: 64 VVLQHRFDDLEVTEEGFAVTLSFGEAPERLYIPYDAIKTFVDPSVEFGLRF 114
>gi|85702989|ref|ZP_01034093.1| hypothetical protein ROS217_19647 [Roseovarius sp. 217]
gi|85671917|gb|EAQ26774.1| hypothetical protein ROS217_19647 [Roseovarius sp. 217]
Length = 163
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 77/114 (67%), Gaps = 1/114 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VLS+V S G LPG HHF+ITF T +++ L++ YP +MT
Sbjct: 16 IDYGNLMHRAMRGLIQEVLSKVQSEG-LPGAHHFFITFDTKHPEAKLANWLKQRYPSEMT 74
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVH 143
+V+Q+ + DLKV ++ F V L+F + PERL +P++AI+ F DPSV F L F+
Sbjct: 75 VVMQHWYDDLKVTNDGFAVTLNFGDAPERLYVPYDAIQTFVDPSVEFGLRFETQ 128
>gi|126735815|ref|ZP_01751560.1| hypothetical protein RCCS2_18106 [Roseobacter sp. CCS2]
gi|126715002|gb|EBA11868.1| hypothetical protein RCCS2_18106 [Roseobacter sp. CCS2]
Length = 159
Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 96/177 (54%), Gaps = 25/177 (14%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL++V G LPG+HHF++TF T V I+ L YP +MT
Sbjct: 5 IDYGNLMHRAMRGLIQEVLTDVQKDG-LPGQHHFFVTFDTMHPDVEIADWLSDRYPGEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+VIQ+ F +L+V + F + L+F + PE L IP++AIK F DPSV F L F+ E
Sbjct: 64 VVIQHWFDNLEVTNEGFTISLNFGDNPETLYIPYDAIKTFVDPSVEFGLRFETQDE---- 119
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN---KMASVISLDNFRK 203
D++ S +++ + + ++ N K A V+SLD FRK
Sbjct: 120 -----------------DEDTAMSDVEEAPMDEMVEPEDANDAPKEADVVSLDQFRK 159
>gi|296532841|ref|ZP_06895511.1| protein of hypothetical function DUF1321 [Roseomonas cervicalis
ATCC 49957]
gi|296266829|gb|EFH12784.1| protein of hypothetical function DUF1321 [Roseomonas cervicalis
ATCC 49957]
Length = 148
Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 71/121 (58%), Gaps = 8/121 (6%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
++L+ YD D + + ALR L E A LPGEHHFY+TF T+ G+ I +L+
Sbjct: 9 ESLLPYDRWTEDAMREVALRAL------EHAGEHGLPGEHHFYLTFRTDRPGIAIPSHLK 62
Query: 82 KNYPEKMTIVIQNQFWDLKV--LDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
YPE+MTIV+Q+QFWDLKV GLSF VP LVIP AI F+DP V L
Sbjct: 63 ARYPEEMTIVLQHQFWDLKVDRQAGLVSAGLSFGGVPATLVIPIAAITAFWDPHVRVGLR 122
Query: 140 F 140
F
Sbjct: 123 F 123
>gi|146276774|ref|YP_001166933.1| hypothetical protein Rsph17025_0722 [Rhodobacter sphaeroides ATCC
17025]
gi|145555015|gb|ABP69628.1| protein of unknown function DUF1321 [Rhodobacter sphaeroides ATCC
17025]
Length = 153
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL +VA G LPG HHF+ITF T V ++ LR YP++MT
Sbjct: 5 IDYGNLMHRAMRGLIQSVLEDVAEHG-LPGAHHFFITFDTTHPDVAMADWLRARYPQEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
+VIQ+ + +L V D F + L+F N PE LVIPF+A++ F DPSV F L F
Sbjct: 64 VVIQHWYENLAVDDRGFSITLNFGNQPEPLVIPFDAVRTFVDPSVEFGLRF 114
>gi|310816105|ref|YP_003964069.1| hypothetical protein EIO_1645 [Ketogulonicigenium vulgare Y25]
gi|308754840|gb|ADO42769.1| conserved hypothetical protein [Ketogulonicigenium vulgare Y25]
Length = 146
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 87/144 (60%), Gaps = 2/144 (1%)
Query: 39 ALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWD 98
A+RGL++ +L ++A G LPGEHHF+ITF TN V ++ L YP +MT+V+Q+ F D
Sbjct: 4 AMRGLIQEILGDIAQTG-LPGEHHFFITFDTNHPDVELADWLFDRYPHEMTVVLQHWFQD 62
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L V D F V L+F + PE + +P++AI+ F DPSV F L F+ E +++ E G
Sbjct: 63 LNVTDEGFSVVLNFGDNPEPIYVPYDAIRTFVDPSVEFGLRFEAQDEDEDDEDEDGEAPM 122
Query: 159 V-LTSPDNFDKNQTNSVSQDSSKK 181
+ PD+ + Q VS D ++
Sbjct: 123 AEMVEPDDTPRPQAEIVSLDKFRR 146
>gi|260577107|ref|ZP_05845085.1| protein of unknown function DUF1321 [Rhodobacter sp. SW2]
gi|259020685|gb|EEW24003.1| protein of unknown function DUF1321 [Rhodobacter sp. SW2]
Length = 154
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 74/112 (66%), Gaps = 1/112 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL++VA G LPG HHF+ITF T V+I++ L YP +MT
Sbjct: 5 IDYGNLMHRAMRGLIQSVLADVARDG-LPGAHHFFITFDTTHPDVQIAKWLHDRYPAEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
+VIQ+ F DL V D F + L+F N PE LVIPF+++ F DPSV F L F+
Sbjct: 64 VVIQHWFEDLIVTDKGFSITLNFGNQPEPLVIPFDSLLTFVDPSVEFGLRFE 115
>gi|221638549|ref|YP_002524811.1| hypothetical protein RSKD131_0450 [Rhodobacter sphaeroides KD131]
gi|221159330|gb|ACM00310.1| Hypothetical Protein RSKD131_0450 [Rhodobacter sphaeroides KD131]
Length = 153
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL +VA G LPG HHF+ITF T V ++ LR YP++MT
Sbjct: 5 IDYGNLMHRAMRGLIQSVLEDVAEHG-LPGAHHFFITFDTTHPDVAMADWLRARYPQEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
+VIQ+ + +L D+ F V L+F N PE LVIPF+A++ F DPSV F L F
Sbjct: 64 VVIQHWYENLSADDHGFSVTLNFGNQPEPLVIPFDAVRTFVDPSVEFGLRF 114
>gi|77462689|ref|YP_352193.1| hypothetical protein RSP_2139 [Rhodobacter sphaeroides 2.4.1]
gi|126461582|ref|YP_001042696.1| hypothetical protein Rsph17029_0813 [Rhodobacter sphaeroides ATCC
17029]
gi|332557572|ref|ZP_08411894.1| hypothetical protein RSWS8N_00935 [Rhodobacter sphaeroides WS8N]
gi|77387107|gb|ABA78292.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
gi|126103246|gb|ABN75924.1| protein of unknown function DUF1321 [Rhodobacter sphaeroides ATCC
17029]
gi|332275284|gb|EGJ20599.1| hypothetical protein RSWS8N_00935 [Rhodobacter sphaeroides WS8N]
Length = 152
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL +VA G LPG HHF+ITF T V ++ LR YP++MT
Sbjct: 5 IDYGNLMHRAMRGLIQSVLEDVAEHG-LPGAHHFFITFDTTHPDVAMADWLRARYPQEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
+VIQ+ + +L D+ F V L+F N PE LVIPF+A++ F DPSV F L F
Sbjct: 64 VVIQHWYENLSADDHGFSVTLNFGNQPEPLVIPFDAVRTFVDPSVEFGLRF 114
>gi|259416532|ref|ZP_05740452.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259347971|gb|EEW59748.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 160
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 92/175 (52%), Gaps = 18/175 (10%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I Y L A+RGL++ VL +VA+ G LPG HHF+ITF T+ ++ L YP +M
Sbjct: 4 QIDYGNLMHRAMRGLIRNVLDDVAANG-LPGAHHFFITFDTSHPDAELADWLSDRYPGEM 62
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
T+V+Q+ F +L V D F V L+F + PE L IP++AIK F DPSV F L F+
Sbjct: 63 TVVMQHWFDNLNVTDEGFSVTLNFGDAPEPLYIPYDAIKTFVDPSVEFGLRFE------- 115
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+TG+ D+ D S + K A V+SLD+FRK
Sbjct: 116 ------STGE----DDDEDLAPVEVASDLPDDEDEDDAPAAKKDADVVSLDSFRK 160
>gi|254477784|ref|ZP_05091170.1| conserved hypothetical protein [Ruegeria sp. R11]
gi|214032027|gb|EEB72862.1| conserved hypothetical protein [Ruegeria sp. R11]
Length = 158
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 96/174 (55%), Gaps = 20/174 (11%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL VA G LPG HHF+ITF T+ ++ L YP +MT
Sbjct: 5 IDYGNLMHSAMRGLIRSVLEGVAKDG-LPGNHHFFITFDTSHPDAELADWLSDRYPGEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ F +L V ++ F + L+F + PE L IP++AIK F DPSV F L F+ + +
Sbjct: 64 VVMQHWFDNLNVGEDGFAITLNFGDAPEPLYIPYDAIKTFVDPSVEFGLRFESPDDDDMD 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + D D + V +D+++KK A V+SLD+FRK
Sbjct: 124 DV----------AEDGLDDDIEIEVQEDTAEKKE---------ADVVSLDSFRK 158
>gi|254460264|ref|ZP_05073680.1| conserved hypothetical protein [Rhodobacterales bacterium HTCC2083]
gi|206676853|gb|EDZ41340.1| conserved hypothetical protein [Rhodobacteraceae bacterium
HTCC2083]
Length = 154
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 89/165 (53%), Gaps = 14/165 (8%)
Query: 39 ALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWD 98
A+RGL+K VL +V G LPGEHHF+ITF T V+I+ LR+ YP +MT+V+Q+ F +
Sbjct: 4 AMRGLIKKVLLDVKDQG-LPGEHHFFITFDTTHPDVQIADWLRERYPAEMTVVVQHWFDN 62
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L + D+ F + L+F + PE L IPF+A++ F DPSV F L F
Sbjct: 63 LDIRDDGFSITLNFGDAPEPLNIPFDALRTFVDPSVEFGLRF-------------EADED 109
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
P +Q ++ + ++ K A ++SLD FRK
Sbjct: 110 DEEEPALHSVDQEAPETEPAEIMLVDEEDAPKKDAEIVSLDAFRK 154
>gi|89054882|ref|YP_510333.1| hypothetical protein Jann_2391 [Jannaschia sp. CCS1]
gi|88864431|gb|ABD55308.1| protein of unknown function DUF1321 [Jannaschia sp. CCS1]
Length = 162
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 74/112 (66%), Gaps = 1/112 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L EA+ G+++ VL VA G LPGEHHF+ITF T V ++ LR+ YPE+M
Sbjct: 8 IPYGRLMHEAVCGVIRDVLDGVAKSG-LPGEHHFFITFDTQHADVDLADWLRERYPEEMM 66
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
IVIQN + DL+V ++ F + L+F + PERL IPF++I F DPSV F F+
Sbjct: 67 IVIQNWYDDLQVDNDGFSITLNFGDAPERLRIPFDSIATFVDPSVEFGWRFE 118
>gi|126732385|ref|ZP_01748184.1| hypothetical protein SSE37_05532 [Sagittula stellata E-37]
gi|126707024|gb|EBA06091.1| hypothetical protein SSE37_05532 [Sagittula stellata E-37]
Length = 145
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
Query: 39 ALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWD 98
A+RGL++ VL+ V+ G LPG+HHF+ITF T V ++ L++ YP +MT+V+QN + D
Sbjct: 4 AMRGLIQEVLTGVSEHG-LPGDHHFFITFDTRHPEVELADWLKQRYPGEMTVVVQNWYED 62
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
L+V D F + L+F + PERL IP++AI+ F DPSV F L F+
Sbjct: 63 LEVGDEGFAITLNFGDAPERLSIPYDAIRTFVDPSVEFGLRFE 105
>gi|149914788|ref|ZP_01903318.1| hypothetical protein RAZWK3B_14384 [Roseobacter sp. AzwK-3b]
gi|149811581|gb|EDM71416.1| hypothetical protein RAZWK3B_14384 [Roseobacter sp. AzwK-3b]
Length = 157
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 94/174 (54%), Gaps = 21/174 (12%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L +A+RGL++ VL V G LPG HHF+ITF T R++ L++ YP +MT
Sbjct: 5 IDYGKLMHQAMRGLIQRVLVGVQDNG-LPGMHHFFITFDTKHPDARLADWLKERYPSEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ F +L+V ++ F V L+F + PE L IP++AIK F DPSV F L F+
Sbjct: 64 VVMQHWFDNLEVTNDGFSVTLNFGDAPENLYIPYDAIKTFVDPSVEFGLRFE-------- 115
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+PD+ + + + D + + A V+SLD+FRK
Sbjct: 116 ------------TPDDDEPSGDDPDEDDDITDGIDVPEGERTDAEVVSLDSFRK 157
>gi|56696782|ref|YP_167143.1| hypothetical protein SPO1907 [Ruegeria pomeroyi DSS-3]
gi|56678519|gb|AAV95185.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
Length = 151
Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL+K VL++VA G LPG HHF+ITF T GV+++ L YP +MT
Sbjct: 5 IDYGNLMHTAMRGLIKTVLADVAQHG-LPGAHHFFITFDTRYEGVQLADWLADRYPGEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
IV+Q+ + +L V ++ F + L+F + PE L IP++AI+ F DPSV F L F
Sbjct: 64 IVMQHWYENLDVGEDGFAITLNFGDSPEPLYIPYDAIRTFVDPSVEFGLRF 114
>gi|89069092|ref|ZP_01156465.1| hypothetical protein OG2516_15244 [Oceanicola granulosus HTCC2516]
gi|89045265|gb|EAR51331.1| hypothetical protein OG2516_15244 [Oceanicola granulosus HTCC2516]
Length = 154
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 91/174 (52%), Gaps = 24/174 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL +VA G LPG HHF+ITF T V I+ L YP +MT
Sbjct: 5 IDYGNLMHRAMRGLIQQVLQDVAEEG-LPGNHHFFITFDTMHPDVEIADWLSDRYPGEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ F L+V D F V L+F + PE L IP++AIK F DPSV F L F+
Sbjct: 64 VVMQHWFDGLEVTDEGFSVTLNFGDSPEPLYIPYDAIKTFVDPSVEFGLRFETQE----- 118
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ +P + + +D + + K+ A V+SLD FRK
Sbjct: 119 -----EDDEDEEAP-------MDEMVEDDTPDAAPKE------AEVVSLDRFRK 154
>gi|119384644|ref|YP_915700.1| hypothetical protein Pden_1909 [Paracoccus denitrificans PD1222]
gi|119374411|gb|ABL70004.1| protein of unknown function DUF1321 [Paracoccus denitrificans
PD1222]
Length = 153
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y + A++ L+ VL VA G LPGEHHF+ITF T V ++ LR+ YPE+MT
Sbjct: 5 IDYGGMMHRAMQRLIAEVLETVAEEG-LPGEHHFFITFDTRDSDVEMADWLRERYPEEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVH 143
IVIQ+ F +L V F + L+F N PE L IPF+A++ F DPSV F L F+ H
Sbjct: 64 IVIQHWFENLSVTPEGFHITLNFGNSPEPLYIPFDALRTFVDPSVEFGLRFENH 117
>gi|110679541|ref|YP_682548.1| hypothetical protein RD1_2277 [Roseobacter denitrificans OCh 114]
gi|109455657|gb|ABG31862.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 135
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L EA+RGL++ VL +V G LPGEHHF+ITF T ++ L YP +MT
Sbjct: 5 IDYGNLMHEAMRGLIRKVLLDVCDHG-LPGEHHFFITFDTGHPDAELADWLFDRYPGEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ + +L+V D F V L+F + PE L IP++AIK F DPSV F L F+ + EE
Sbjct: 64 VVMQHWYDNLEVTDEGFSVTLNFGDAPEPLYIPYDAIKTFVDPSVEFGLRFETQHDEDEE 123
Query: 150 K 150
Sbjct: 124 A 124
>gi|330991061|ref|ZP_08315015.1| Fumarate hydratase class I [Gluconacetobacter sp. SXCC-1]
gi|329761882|gb|EGG78372.1| Fumarate hydratase class I [Gluconacetobacter sp. SXCC-1]
Length = 776
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 70/185 (37%), Positives = 88/185 (47%), Gaps = 17/185 (9%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
D+LM YD D + LR L E A+ LPG+HHFY+TF T+ GV + LR
Sbjct: 17 DSLMPYDSWIEDAYRQVMLRAL------EHAAEHGLPGDHHFYLTFRTDWPGVGMPDRLR 70
Query: 82 KNYPEKMTIVIQNQFWDLKV--LDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
YP ++TIV+Q+QFWDLKV VGLSF V LVIP A+ F DP + L
Sbjct: 71 AQYPHEITIVLQHQFWDLKVDRARQVISVGLSFGGVASTLVIPVAAVSAFADPHIRLALR 130
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
F V EH + GG V P D + + K+ V+SL
Sbjct: 131 FSVP-EH--PPVAGGAPNVVAVQPATAHDAAPVQGGADGTDAE------KDDSPQVVSLA 181
Query: 200 NFRKK 204
FRKK
Sbjct: 182 AFRKK 186
>gi|258543545|ref|YP_003188978.1| hypothetical protein APA01_24930 [Acetobacter pasteurianus IFO
3283-01]
gi|256634623|dbj|BAI00599.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256637679|dbj|BAI03648.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256640733|dbj|BAI06695.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256643788|dbj|BAI09743.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256646843|dbj|BAI12791.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256649896|dbj|BAI15837.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256652886|dbj|BAI18820.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655940|dbj|BAI21867.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 178
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 89/177 (50%), Gaps = 25/177 (14%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
+ Y+ EA R ++ L V+ G L GEHHFY+TF T+ GV I LR YP +MT
Sbjct: 20 LPYERWLNEASRSVMLNALEHVSREG-LAGEHHFYLTFLTDFPGVDIPARLRAQYPHEMT 78
Query: 90 IVIQNQFWDLKV--LDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
IV+Q+QFWDLKV VGLSF V LVIP AI GF DP++ F L F
Sbjct: 79 IVLQHQFWDLKVDRKAKTVSVGLSFGGVGSILVIPVQAITGFADPAIRFSLHFAAMEPTE 138
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E E TG+ P+ +++S SQ V+SLD FRKK
Sbjct: 139 EPTPEEPTTGQ----PEQDGPEESDSSSQ------------------VVSLDAFRKK 173
>gi|149202503|ref|ZP_01879475.1| hypothetical protein RTM1035_07799 [Roseovarius sp. TM1035]
gi|149143785|gb|EDM31819.1| hypothetical protein RTM1035_07799 [Roseovarius sp. TM1035]
Length = 141
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Query: 39 ALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWD 98
A+RGL++ VLS+V + G LPG HHF+ITF T +++ L++ YP +MT+V+Q+ + D
Sbjct: 4 AMRGLIQEVLSKVQAEG-LPGAHHFFITFDTKHPEAKLADWLKQRYPSEMTVVMQHWYDD 62
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
LKV ++ F V L+F + PERL +P+++I+ F DPSV F L F+
Sbjct: 63 LKVTNDGFGVTLNFGDAPERLYVPYDSIQTFVDPSVEFGLRFE 105
>gi|83942476|ref|ZP_00954937.1| hypothetical protein EE36_15587 [Sulfitobacter sp. EE-36]
gi|83953695|ref|ZP_00962416.1| hypothetical protein NAS141_05708 [Sulfitobacter sp. NAS-14.1]
gi|83841640|gb|EAP80809.1| hypothetical protein NAS141_05708 [Sulfitobacter sp. NAS-14.1]
gi|83846569|gb|EAP84445.1| hypothetical protein EE36_15587 [Sulfitobacter sp. EE-36]
Length = 156
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 22/174 (12%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L +A+RGL++ VL +VA+ G LPG HHF+ITF T+ ++ L YP +MT
Sbjct: 5 IEYGNLMHDAMRGLIRQVLLDVAANG-LPGNHHFFITFDTSHPDAELADWLSDRYPGEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ + L+V + F V L+F + PE + IP++AI+ F DPSV F L+F E
Sbjct: 64 VVMQHWYDKLEVTEEGFSVTLNFGDAPEPMYIPYDAIRTFVDPSVEFGLKF--------E 115
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ E G +++ + Q + + ++ K A ++SLD+FRK
Sbjct: 116 QQEPGQ------------QDEDEDLPQ-QDESELEVEEEAPKAAEIVSLDSFRK 156
>gi|296114517|ref|ZP_06833170.1| hypothetical protein GXY_02026 [Gluconacetobacter hansenii ATCC
23769]
gi|295978873|gb|EFG85598.1| hypothetical protein GXY_02026 [Gluconacetobacter hansenii ATCC
23769]
Length = 205
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 93/185 (50%), Gaps = 14/185 (7%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
+ YD ++A R ++ V + G LPG+HHFY+TF T+ GV + + +R YP ++T
Sbjct: 20 LPYDDWIEDAYRDVMLRAFEYVVTEGGLPGDHHFYLTFRTDWPGVEMPERVRAQYPHEIT 79
Query: 90 IVIQNQFWDLKV--LDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
IV+Q+QF LKV V L+F VP LVIP AI F DPSV L F V EH
Sbjct: 80 IVLQHQFHGLKVDRAAGTISVSLAFGGVPATLVIPVAAISAFADPSVKLPLSFRV-PEHP 138
Query: 148 EEKLE--------GGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
+ G G+ +P ++ +QD++ + + Q + V+SL
Sbjct: 139 PQPAPSAEIHNVFGQGQGQGPRAPQP-EQEAHAPGAQDATPTSAEETQPSSPQ--VVSLA 195
Query: 200 NFRKK 204
FRK+
Sbjct: 196 AFRKR 200
>gi|329113258|ref|ZP_08242041.1| Hypothetical protein APO_0022 [Acetobacter pomorum DM001]
gi|326697399|gb|EGE49057.1| Hypothetical protein APO_0022 [Acetobacter pomorum DM001]
Length = 178
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 89/177 (50%), Gaps = 25/177 (14%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
+ Y+ +A R ++ L V+ G L GEHHFY+TF T+ GV I LR YP +MT
Sbjct: 20 LPYERWLNDASRSVMLNALEHVSREG-LAGEHHFYLTFLTDFPGVDIPARLRAQYPHEMT 78
Query: 90 IVIQNQFWDLKV--LDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
IV+Q+QFWDLKV VGLSF V LVIP AI GF DP+V F L F
Sbjct: 79 IVLQHQFWDLKVDRAAKTVSVGLSFGGVGSILVIPVQAITGFADPAVRFSLHFAAMEPTE 138
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E E TG+ P+ +++S SQ V+SLD FRKK
Sbjct: 139 EPTPEEPTTGQ----PEPDRPEESDSSSQ------------------VVSLDAFRKK 173
>gi|114768944|ref|ZP_01446570.1| hypothetical protein OM2255_04420 [alpha proteobacterium HTCC2255]
gi|114549861|gb|EAU52742.1| hypothetical protein OM2255_04420 [alpha proteobacterium HTCC2255]
Length = 156
Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 101/181 (55%), Gaps = 31/181 (17%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D I Y + ++A++ L+ VL +++ G LPG HH++I+F T GV ++ +++ YPE+
Sbjct: 3 DTINYAQMMQKAMQSLMIDVLKKISKNG-LPGNHHYFISFDTKFEGVVVADWIKERYPEE 61
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVH---- 143
MTIVIQ+ F +L+V ++F + L+F + PE L IP+N+I F DPSV F L F+
Sbjct: 62 MTIVIQHWFDNLEVNADNFSITLNFGDNPENLTIPWNSISTFVDPSVEFGLRFEDEANED 121
Query: 144 IEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
I+ +EE E SK + ++N +A ++SLD+FRK
Sbjct: 122 IDAVEEIPE--------------------------SKMVIIEDDDENNVAEIVSLDSFRK 155
Query: 204 K 204
K
Sbjct: 156 K 156
>gi|148260339|ref|YP_001234466.1| hypothetical protein Acry_1336 [Acidiphilium cryptum JF-5]
gi|326403530|ref|YP_004283612.1| hypothetical protein ACMV_13830 [Acidiphilium multivorum AIU301]
gi|146402020|gb|ABQ30547.1| protein of unknown function DUF1321 [Acidiphilium cryptum JF-5]
gi|325050392|dbj|BAJ80730.1| hypothetical protein ACMV_13830 [Acidiphilium multivorum AIU301]
Length = 169
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
DT + + YD ++ALR +V L + G +PGEHHFYITFAT GV + LR
Sbjct: 6 DTPIPESLLPYDEWTEDALRLVVLRALDHASREG-MPGEHHFYITFATAHPGVIMPDRLR 64
Query: 82 KNYPEKMTIVIQNQFWDLKV--LDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
YP++MTIV+Q+Q+ DL V F V LSF VP L IP +AI F DP+V F L+
Sbjct: 65 AQYPDEMTIVLQHQYRDLSVDAEAQRFSVRLSFGGVPATLDIPLDAITAFADPAVRFGLQ 124
Query: 140 FDVHI 144
F +
Sbjct: 125 FAARV 129
>gi|163736230|ref|ZP_02143649.1| hypothetical protein RGBS107_13901 [Phaeobacter gallaeciensis
BS107]
gi|163741242|ref|ZP_02148634.1| hypothetical protein RG210_17320 [Phaeobacter gallaeciensis 2.10]
gi|161385595|gb|EDQ09972.1| hypothetical protein RG210_17320 [Phaeobacter gallaeciensis 2.10]
gi|161390100|gb|EDQ14450.1| hypothetical protein RGBS107_13901 [Phaeobacter gallaeciensis
BS107]
Length = 158
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 93/174 (53%), Gaps = 20/174 (11%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL VA G LPG HHF+ITF T+ ++ L YP +MT
Sbjct: 5 IDYGNLMHSAMRGLIRSVLDGVAEHG-LPGNHHFFITFDTSHPDAELADWLSDRYPGEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ F +L V ++ F + L+F + PE L IP++AIK F DPSV F L F E
Sbjct: 64 VVMQHWFDNLDVGEDGFAITLNFGDAPEPLYIPYDAIKTFVDPSVEFGLRF--------E 115
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E + + + D + V +D + KK A V+SLD+FRK
Sbjct: 116 SPEDDEEVEEMVA--ELDDDIEIEVDEDPADKKP---------ADVVSLDSFRK 158
>gi|163746402|ref|ZP_02153760.1| hypothetical protein OIHEL45_13395 [Oceanibulbus indolifex HEL-45]
gi|161380287|gb|EDQ04698.1| hypothetical protein OIHEL45_13395 [Oceanibulbus indolifex HEL-45]
Length = 159
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 95/174 (54%), Gaps = 19/174 (10%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L EA+RGL++ VL +++ G LPG HHF+ITF T+ ++ L YP +MT
Sbjct: 5 IDYGNLMHEAMRGLIRKVLQDISDNG-LPGNHHFFITFDTSHPDAELADWLSDRYPGEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ + L V + F + L+F + PE L IP++AI+ F DPSV F L F+ E+
Sbjct: 64 VVMQHWYDGLDVTPDGFAITLNFGDAPEPLYIPYDAIRTFVDPSVEFGLRFEQQESEEED 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
NT +QT+ + +++ S K A ++SLD+FRK
Sbjct: 124 DDSEENT-----------LDQTDEDELEVAEEPS-------KDAEIVSLDSFRK 159
>gi|126737556|ref|ZP_01753286.1| hypothetical protein RSK20926_17982 [Roseobacter sp. SK209-2-6]
gi|126720949|gb|EBA17653.1| hypothetical protein RSK20926_17982 [Roseobacter sp. SK209-2-6]
Length = 157
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 90/174 (51%), Gaps = 21/174 (12%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL EV G LPG HHF+ITF TN +++ L+ YP +MT
Sbjct: 5 IDYGNLMHNAMRGLIRNVLQEVVDHG-LPGNHHFFITFDTNHPDAQLADWLKDRYPGEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ + +L V ++ F V L+F + PE L IP+++I+ F DPSV F L F+ E
Sbjct: 64 VVMQHWYDNLTVDEDGFGVTLNFGDAPEPLYIPYDSIETFVDPSVEFGLRFETADEQA-- 121
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + + ++ K A V+SLD+FRK
Sbjct: 122 ------------------GEDEDESEEIVEEGDEAEEPKKPAEADVVSLDSFRK 157
>gi|254487335|ref|ZP_05100540.1| conserved hypothetical protein [Roseobacter sp. GAI101]
gi|214044204|gb|EEB84842.1| conserved hypothetical protein [Roseobacter sp. GAI101]
Length = 144
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 24/166 (14%)
Query: 38 EALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFW 97
+A+RGL++ VL +VA+ G LPG HHF+ITF T ++ L YP +MT+V+Q+ +
Sbjct: 3 DAMRGLIRQVLLDVAANG-LPGNHHFFITFDTEHPDAELADWLSDRYPGEMTVVMQHWYD 61
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
L+V + F V L+F + PE L IP++AI+ F DPSV F L+F E+ + G+
Sbjct: 62 KLEVTEEGFSVTLNFGDAPEPLYIPYDAIRTFVDPSVEFGLKF--------EQQDSGSGD 113
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ L + + + + K A ++SLD+FRK
Sbjct: 114 RAL---------------EQKEESELEVAEEAPKAAEIVSLDSFRK 144
>gi|162146691|ref|YP_001601150.1| hypothetical protein GDI_0869 [Gluconacetobacter diazotrophicus PAl
5]
gi|161785266|emb|CAP54812.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 181
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 84/185 (45%), Gaps = 27/185 (14%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
D+L+ YD D LR L E+ LP HHFYIT+ TN GV + LR
Sbjct: 17 DSLLPYDSWIEDAYRTVMLRAL------ELVGREGLPEGHHFYITYLTNWPGVELPARLR 70
Query: 82 KNYPEKMTIVIQNQFWDLKV--LDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
YP ++TIV+Q+QFWDLKV VGLSF V LVIP +AI F DP + L
Sbjct: 71 AQYPHEITIVLQHQFWDLKVDEASRTVSVGLSFGGVGSTLVIPIDAITAFADPHIRLALR 130
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
F T L S D + + + T+ + + + V+SL
Sbjct: 131 F---------------TPPELASED----EEPDGAEAPDAAPADTEARAEESSSQVVSLA 171
Query: 200 NFRKK 204
FRKK
Sbjct: 172 AFRKK 176
>gi|83951366|ref|ZP_00960098.1| hypothetical protein ISM_12425 [Roseovarius nubinhibens ISM]
gi|83836372|gb|EAP75669.1| hypothetical protein ISM_12425 [Roseovarius nubinhibens ISM]
Length = 170
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 91/174 (52%), Gaps = 8/174 (4%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+R L++ VL V G LPG HHF+ITF T ++ LR YP +MT
Sbjct: 5 IDYGKLMHAAMRRLIQDVLMGVQKDG-LPGAHHFFITFDTTHPEATMADWLRDRYPAEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ + +L V D F + L+F + PE L IP++AI+ F DPSV F L F+ +E
Sbjct: 64 VVVQHWYDNLNVTDEGFGITLNFGDAPENLYIPYDAIQTFVDPSVEFGLRFEQQ-SDDDE 122
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ E + +L + D S+D + A V+SLD+FRK
Sbjct: 123 EDEDEDDEDLLDEDGSLDDEDMEDASEDRHGDAPRTE------AEVVSLDSFRK 170
>gi|209543319|ref|YP_002275548.1| hypothetical protein Gdia_1150 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209530996|gb|ACI50933.1| protein of unknown function DUF1321 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 181
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 83/185 (44%), Gaps = 27/185 (14%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
D+L+ YD D LR L E+ LP HHFYIT+ TN GV + LR
Sbjct: 17 DSLLPYDSWIEDAYRTVMLRAL------ELVGREGLPEGHHFYITYLTNWPGVELPARLR 70
Query: 82 KNYPEKMTIVIQNQFWDLKV--LDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
Y ++TIV+Q+QFWDLKV VGLSF V LVIP +AI F DP + L
Sbjct: 71 AQYLHEITIVLQHQFWDLKVDEASRTVSVGLSFGGVGSTLVIPIDAITAFADPHIRLALR 130
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
F T L S D + + + T+ + + + V+SL
Sbjct: 131 F---------------TPPELASED----EEPDGAEAPDAAPADTEARAEESSSQVVSLA 171
Query: 200 NFRKK 204
FRKK
Sbjct: 172 AFRKK 176
>gi|148284854|ref|YP_001248944.1| hypothetical protein OTBS_1581 [Orientia tsutsugamushi str.
Boryong]
gi|146740293|emb|CAM80674.1| conserved hypothetical protein [Orientia tsutsugamushi str.
Boryong]
Length = 175
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 100/176 (56%), Gaps = 6/176 (3%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y+ L +++ +VK L + AS +++FYI+F T GV+IS++LR Y E+MT
Sbjct: 4 INYEELIDQSMLNVVKQAL-KFASTACNLEDNYFYISFCTIFPGVKISEHLRVKYVEQMT 62
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q+QF DL + + F V LSFS E++V+P+ +I F DP ++ ++ ++
Sbjct: 63 IVLQHQFSDLVIESDFFSVCLSFSGKIEKIVVPWKSIIMFIDPEAQLRIKLFYYVNKYKQ 122
Query: 150 KLEGGNTGKVLTSPDNFDKNQ-TNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+L N ++ +KNQ + + + K K+ K NK V+SLD+FRKK
Sbjct: 123 QL-YKNVDSIVEDSSKENKNQYCDQLVATNEKLKNMKDIVGNK---VVSLDSFRKK 174
>gi|189184158|ref|YP_001937943.1| hypothetical protein OTT_1251 [Orientia tsutsugamushi str. Ikeda]
gi|189180929|dbj|BAG40709.1| hypothetical protein OTT_1251 [Orientia tsutsugamushi str. Ikeda]
Length = 175
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 101/176 (57%), Gaps = 6/176 (3%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y+ L +++ +VK L + AS +++FYI+F T GV+IS++LR Y E+MT
Sbjct: 4 INYEELIDQSMLNVVKQAL-KFASTNCNFEDNYFYISFCTTFPGVKISEHLRVKYLEQMT 62
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q+QF DL + + F V LSFS E++V+P+ +I F DP ++ ++ ++
Sbjct: 63 IVLQHQFSDLVIESDFFSVCLSFSGKIEKIVVPWKSIIMFIDPEAQLRIKLFYYVNKYKQ 122
Query: 150 KLEGGNTGKVLTSPDNFDKNQ-TNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+L N ++ + +KNQ + + + K K+ K NK V+SLD+FRKK
Sbjct: 123 QL-YKNVDGIVEDSNKENKNQYCDQLVATNEKLKNMKDIVGNK---VVSLDSFRKK 174
>gi|88608394|ref|YP_506347.1| hypothetical protein NSE_0462 [Neorickettsia sennetsu str.
Miyayama]
gi|88600563|gb|ABD46031.1| conserved hypothetical protein [Neorickettsia sennetsu str.
Miyayama]
Length = 166
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 82/148 (55%), Gaps = 9/148 (6%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEH-HFYITFATNARGVRISQNLRKNYPEK 87
I+Y L A+ G+V+ V+ +V++ GE +F+ITF+T R +S L+K YP +
Sbjct: 16 EIKYKALVNAAMLGIVRSVMKDVSA-----GEAANFFITFST--RNTSLSDGLKKKYPRE 68
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF-DVHIEH 146
M+I++QNQF DL+V F V LSFS V E + +PF++I F D NF LEF D+ E
Sbjct: 69 MSIILQNQFSDLQVSYEKFSVVLSFSGVEECITVPFSSILYFLDRECNFALEFHDLASEG 128
Query: 147 IEEKLEGGNTGKVLTSPDNFDKNQTNSV 174
++++ N G N Q +
Sbjct: 129 SVDEVDFCNAGGAYVPGTNAKGEQQGKI 156
>gi|254796819|ref|YP_003081656.1| hypothetical protein NRI_0436 [Neorickettsia risticii str.
Illinois]
gi|254590067|gb|ACT69429.1| conserved hypothetical protein [Neorickettsia risticii str.
Illinois]
Length = 153
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 80/131 (61%), Gaps = 9/131 (6%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEH-HFYITFATNARGVRISQNLRKNYPEK 87
I+Y L A+ G+V+ V+ +V++ GE +F+ITF+T R +S +L+K YP +
Sbjct: 3 EIKYKALVNTAMLGVVRSVMKDVSA-----GEAANFFITFST--RNASLSDSLKKKYPCE 55
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF-DVHIEH 146
M+I++QNQF +L+V F V LSFS V E + +PF++I F D NF LEF D+ E
Sbjct: 56 MSIILQNQFRNLQVSYERFSVVLSFSGVEECITVPFSSILYFLDRECNFALEFHDLASEG 115
Query: 147 IEEKLEGGNTG 157
++++ + G
Sbjct: 116 SVDEVDSCDAG 126
>gi|222475080|ref|YP_002563495.1| hypothetical protein AMF_374 [Anaplasma marginale str. Florida]
gi|222419216|gb|ACM49239.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 183
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQN 79
W + M+ D + Y L A+ +V+ L V+ + S GE H I+F T GV +
Sbjct: 21 WCEVSMS-DLVDYRRLVYAAMCSVVREALDFVSKLPS-TGEVHVTISFLTGCSGVVLPDY 78
Query: 80 LRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
LR YPE MTIV+Q QF +L V DN+F V LSF E + +PF A+ + D NF L+
Sbjct: 79 LRAQYPENMTIVLQYQFRELCVSDNYFRVILSFKGKEECITVPFRAVVKYVDMLANFSLD 138
Query: 140 FD 141
+
Sbjct: 139 LE 140
>gi|56416714|ref|YP_153788.1| hypothetical protein AM504 [Anaplasma marginale str. St. Maries]
gi|254994922|ref|ZP_05277112.1| hypothetical protein AmarM_02277 [Anaplasma marginale str.
Mississippi]
gi|255003058|ref|ZP_05278022.1| hypothetical protein AmarPR_02000 [Anaplasma marginale str. Puerto
Rico]
gi|255004181|ref|ZP_05278982.1| hypothetical protein AmarV_02212 [Anaplasma marginale str.
Virginia]
gi|56387946|gb|AAV86533.1| hypothetical protein AM504 [Anaplasma marginale str. St. Maries]
Length = 158
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D + Y L A+ +V+ L V+ + S GE H I+F T GV + LR YPE
Sbjct: 3 DLVDYRRLVYAAMCSVVREALDFVSKLPS-TGEVHVTISFLTGCSGVVLPDYLRAQYPEN 61
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
MTIV+Q QF +L V DN+F V LSF E + +PF A+ + D NF L+ +
Sbjct: 62 MTIVLQYQFRELCVSDNYFRVILSFKGKEECITVPFRAVVKYVDMLANFSLDLE 115
>gi|254452768|ref|ZP_05066205.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198267174|gb|EDY91444.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 111
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 64/130 (49%), Gaps = 23/130 (17%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPS 133
V I+ L YP +MT+VIQ+Q+ LKV D+ F + LSF + PE L +P++AIK F DPS
Sbjct: 5 VEIADWLSDRYPGEMTVVIQHQYESLKVTDHGFSITLSFGDKPEPLYVPYDAIKTFVDPS 64
Query: 134 VNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
V F L F+ + E E V+ P +K K A
Sbjct: 65 VEFGLRFEAQDDEDGETPEA--PMDVMAEP---------------------EKDAPKKDA 101
Query: 194 SVISLDNFRK 203
++SLD FRK
Sbjct: 102 DIVSLDQFRK 111
>gi|269958868|ref|YP_003328657.1| hypothetical protein ACIS_00801 [Anaplasma centrale str. Israel]
gi|269848699|gb|ACZ49343.1| hypothetical protein ACIS_00801 [Anaplasma centrale str. Israel]
Length = 158
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D + Y L A+ +V+ L V+ + S GE H I+F TN GV + LR YPE
Sbjct: 3 DLVDYRRLVYAAMCSVVREALDFVSKL-SPTGEVHITISFLTNYSGVVLPDYLRAQYPEN 61
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
MTIV+Q QF +L V D+ F V LSF E + +PF A+ + D NF L+ +
Sbjct: 62 MTIVLQYQFRELCVSDSSFRVILSFKGKEECITVPFRAVVKYVDMLANFSLDLE 115
>gi|73666951|ref|YP_302967.1| hypothetical protein Ecaj_0325 [Ehrlichia canis str. Jake]
gi|72394092|gb|AAZ68369.1| conserved hypothetical protein [Ehrlichia canis str. Jake]
Length = 157
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 32/180 (17%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEH----HFYITFATNARGVRISQNLRKNYP 85
I Y L A+ +VK L+ +A EH H I+F TN +GV + ++++NYP
Sbjct: 5 IDYQKLMHSAMCTVVKNALTVIAH-----SEHSTNVHIAISFLTNYKGVTLPDHIKENYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+++T+++Q+QF L+V DN V LSF E +VIPF++I + D F L+ + ++
Sbjct: 60 QEITVILQHQFRSLQVFDNSISVILSFRGQEETVVIPFHSIIKYIDVYQGFVLDLEQYMS 119
Query: 146 -HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+IEE DN+D + + K+ + +N ++I +D F KK
Sbjct: 120 NNIEE-------------ADNYDYD---------TDDKNEESDQQNNQDNIIFIDTFLKK 157
>gi|88607243|ref|YP_505354.1| hypothetical protein APH_0775 [Anaplasma phagocytophilum HZ]
gi|88598306|gb|ABD43776.1| conserved hypothetical protein [Anaplasma phagocytophilum HZ]
Length = 157
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D + Y L A+ G+V+ +S + + S + H ++F TN GV + LR YPE
Sbjct: 3 DLVDYRKLVYSAMCGVVREAMSFFSKL-SPTRDVHVAVSFVTNCSGVVLPDYLRIQYPES 61
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
MTIV+Q QF +L V +N F V LSF E + +PF AI + D NF L+ +
Sbjct: 62 MTIVLQYQFRELNVSENGFSVVLSFRGKEELITVPFRAIVKYVDMISNFSLDLE 115
>gi|42520033|ref|NP_965948.1| hypothetical protein WD0128 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|99034650|ref|ZP_01314597.1| hypothetical protein Wendoof_01000587 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|225631130|ref|ZP_03787847.1| hypothetical protein WUni_002980 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|42409770|gb|AAS13882.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|225591172|gb|EEH12337.1| hypothetical protein WUni_002980 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 145
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 80/172 (46%), Gaps = 35/172 (20%)
Query: 32 YDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIV 91
Y L A ++K L ++ G +P H I F T GV + L+K+YP +M I+
Sbjct: 6 YKKLLNSAKFQVIKKTLDVISGNGFIP---HLEILFFTYFNGVTMPDRLKKSYPTQMLII 62
Query: 92 IQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKL 151
+Q+QF+DLKV ++ F V LSF ER+ IPF AI F D
Sbjct: 63 LQHQFYDLKVSEDKFSVSLSFQGKQERITIPFFAISEFRDKI------------------ 104
Query: 152 EGGNTGKVLTSPDNFDKNQTNSVSQDSSKK-KSTKKQNKNKMASVISLDNFR 202
+G VL FDK +S DS K+ KS K K S+IS+D R
Sbjct: 105 ----SGDVLI----FDK-----ISIDSDKEYKSEKCTEKLSNGSIISIDQLR 143
>gi|88658634|ref|YP_507543.1| hypothetical protein ECH_0744 [Ehrlichia chaffeensis str. Arkansas]
gi|88600091|gb|ABD45560.1| conserved hypothetical protein [Ehrlichia chaffeensis str.
Arkansas]
Length = 157
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 9/116 (7%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEH----HFYITFATNARGVRISQNLRKNYP 85
I Y L A+ +VK L+ VA EH H I+F T+ +GV + ++++ NYP
Sbjct: 5 IDYQKLMHAAMCSVVKNALTVVAQ-----SEHFYNVHIAISFLTHYKGVTLPEHVKNNYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
+++T+++Q+QF L+V DN V LSF E +VIP+ +I + D F L+F+
Sbjct: 60 QEITVILQHQFRSLQVFDNSASVVLSFRGKEETVVIPYQSIIKYIDVYQGFVLDFE 115
>gi|254462141|ref|ZP_05075557.1| conserved hypothetical protein [Rhodobacterales bacterium HTCC2083]
gi|206678730|gb|EDZ43217.1| conserved hypothetical protein [Rhodobacteraceae bacterium
HTCC2083]
Length = 117
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 13/130 (10%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPS 133
++I+ LR+ YP +MT+V+Q+ F +L + D+ F + L+F + PE L IPF+A++ F DPS
Sbjct: 1 MQIADWLRERYPAEMTVVVQHWFDNLDIRDDGFSITLNFGDAPEPLNIPFDALRTFVDPS 60
Query: 134 VNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
V F L F P +Q ++ + ++ K A
Sbjct: 61 VEFGLRF-------------EADEDDEEEPALHSVDQEAPETEPAEIMLVDEEDAPKKDA 107
Query: 194 SVISLDNFRK 203
++SLD FRK
Sbjct: 108 EIVSLDAFRK 117
>gi|91205180|ref|YP_537535.1| hypothetical protein RBE_0365 [Rickettsia bellii RML369-C]
gi|157827483|ref|YP_001496547.1| hypothetical protein A1I_05950 [Rickettsia bellii OSU 85-389]
gi|91068724|gb|ABE04446.1| unknown [Rickettsia bellii RML369-C]
gi|157802787|gb|ABV79510.1| hypothetical protein A1I_05950 [Rickettsia bellii OSU 85-389]
Length = 169
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E++ VK VL+ + +L + YI++ T+ V + +R+ YP+++
Sbjct: 2 NIEYKKFLNESMLEFVKKVLARIQH-ENLYWDQLIYISYKTDHPAVILPLKVRQAYPKEI 60
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
TIV+QNQF ++ V D F V LSFS + E + IPF+A+ F D S ++ F
Sbjct: 61 TIVLQNQFENIIVKDTGFSVMLSFSGIKETIYIPFDALISFVDSSNSYSFTF 112
>gi|51473898|ref|YP_067655.1| hypothetical protein RT0714 [Rickettsia typhi str. Wilmington]
gi|51460210|gb|AAU04173.1| rickettsial conserved hypothetical protein [Rickettsia typhi str.
Wilmington]
Length = 159
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 24/174 (13%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+K+
Sbjct: 2 NIEYKKFVNEYMLEFVKKILTKI-QYENLYWDQLIYISYRTDNPAVILPSKVKQAYPKKI 60
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIV+Q QF +L V DN F + +SF V E + IPF+A+ F D + N+ L F+ + +I+
Sbjct: 61 TIVLQYQFENLIVKDNGFSLTVSFDGVKEIIYIPFDALISFVDSNNNYSLTFNQSL-NIQ 119
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
E P ++K ++S + S K S +VI LD FR
Sbjct: 120 E-------------PQQYEK----AISNNKSYKTSLSSN-----PNVIMLDKFR 151
>gi|190570654|ref|YP_001975012.1| hypothetical protein WPa_0202 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019095|ref|ZP_03334902.1| hypothetical protein C1A_867 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190356926|emb|CAQ54310.1| Hypothetical protein WP0202 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995204|gb|EEB55845.1| hypothetical protein C1A_867 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 142
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 62 HFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVI 121
H I F T GV + L+++YP +M I++Q+QF+ LKVL++ F V LSF E++ +
Sbjct: 33 HLEIVFFTRFNGVVMPDYLKESYPTQMLIILQHQFFGLKVLEDKFSVSLSFRGKQEQVTV 92
Query: 122 PFNAIKGFYDP----SVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDK 168
PF AI F+D ++ F ++ D E E+ E + G +++ +DK
Sbjct: 93 PFFAISEFHDKISGDTLVFSVDSDKEYES-EKCAEKSSNGSIISIDQLYDK 142
>gi|15604564|ref|NP_221082.1| hypothetical protein RP727 [Rickettsia prowazekii str. Madrid E]
gi|3861259|emb|CAA15158.1| unknown [Rickettsia prowazekii]
gi|292572371|gb|ADE30286.1| hypothetical protein rpr22_CDS710 [Rickettsia prowazekii Rp22]
Length = 159
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 74/137 (54%), Gaps = 4/137 (2%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++
Sbjct: 2 NIEYKKFVNEYMLEFVKKILTKIQH-ENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQI 60
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI---E 145
TIV+Q QF +L V DN F + +SF V E + IPF+++ F D + N+ L F+ + E
Sbjct: 61 TIVLQYQFENLTVKDNGFSLTVSFDGVKEIIYIPFDSLISFVDSNNNYSLTFNQSLNIPE 120
Query: 146 HIEEKLEGGNTGKVLTS 162
H + + E N TS
Sbjct: 121 HQQYEKEISNNKSYKTS 137
>gi|157826198|ref|YP_001493918.1| hypothetical protein A1C_05875 [Rickettsia akari str. Hartford]
gi|157800156|gb|ABV75410.1| hypothetical protein A1C_05875 [Rickettsia akari str. Hartford]
Length = 157
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E + VK +L+++ +L + YI++ T++ V + ++++YP+++
Sbjct: 2 NIEYKKFVNEYMLEFVKKILTKIQH-ENLYWDQLIYISYKTDSPAVILPSKVKQSYPKQI 60
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD--VHIEH 146
TIV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+ ++I+
Sbjct: 61 TIVLQYQFENLIVHDTGFSLTVSFDGVKEIIYVPFDALISFVDFNNNYSLTFNQSLNIQE 120
Query: 147 IEEKLEGGNTGK 158
++ E NT K
Sbjct: 121 NQQHEEEINTNK 132
>gi|67458571|ref|YP_246195.1| hypothetical protein RF_0179 [Rickettsia felis URRWXCal2]
gi|67004104|gb|AAY61030.1| unknown [Rickettsia felis URRWXCal2]
Length = 178
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 77/142 (54%), Gaps = 8/142 (5%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E + VK +L+++ + +L + YI++ T+ V + +++ YP+++
Sbjct: 21 NIEYKKFVNEYMLEFVKKILTKIQ-LENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQI 79
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI---- 144
TIV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+ +
Sbjct: 80 TIVLQYQFENLIVNDTGFSLTVSFDGVKEIIYVPFDALISFVDSNNNYSLTFNQSLNIQE 139
Query: 145 --EHIEEKLEGGNTGKVLTSPD 164
+H EE++ + K SP+
Sbjct: 140 NHQH-EEEISSNKSYKTSLSPN 160
>gi|58584903|ref|YP_198476.1| hypothetical protein Wbm0646 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58419219|gb|AAW71234.1| Uncharacterized protein conserved in bacteria [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 145
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D I Y L A ++K L ++ P + I F T V IS LRK+YP +
Sbjct: 2 DKIGYKKLLNSAKFQVIKKALDVISGNSFTP---NLEILFFTYFNDVVISDYLRKSYPTQ 58
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
M I++Q+QF+ L+V ++ F V LSF E++ +PF AI F+D
Sbjct: 59 MLIILQHQFYGLEVFEDKFSVSLSFHGKQEQITVPFFAISEFHD 102
>gi|58617072|ref|YP_196271.1| hypothetical protein ERGA_CDS_03450 [Ehrlichia ruminantium str.
Gardel]
gi|58416684|emb|CAI27797.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
Length = 153
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
+ Y L A+ ++K L+ +A H I+F T +GV + +++ +YP ++T
Sbjct: 5 VNYQKLMHSAMCKVIKDALTVIAK-PEYCNSIHVVISFLTQHKGVILPDHVKNSYPNEIT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q+QF L + DNH V LSF+ E + I + +I + D F L+ +I I +
Sbjct: 64 IVLQHQFRHLCIHDNHISVVLSFNGKEEAVTITYCSITKYVDAYQGFSLDLKPYINSIIK 123
Query: 150 KLEGGN 155
+ + N
Sbjct: 124 EEDNNN 129
>gi|57239070|ref|YP_180206.1| hypothetical protein Erum3420 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579013|ref|YP_197225.1| hypothetical protein ERWE_CDS_03490 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161149|emb|CAH58062.1| conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
gi|58417639|emb|CAI26843.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 153
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
+ Y L A+ ++K L+ +A H I+F T +GV + +++ +YP ++T
Sbjct: 5 VNYQKLMHSAMCKVIKDALTVIAK-PEYCNSIHVVISFLTQHKGVILPDHVKNSYPNEIT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
IV+Q+QF L + DNH V LSF+ E + I + +I + D F L+ +I I
Sbjct: 64 IVLQHQFRHLCIHDNHISVVLSFNGKEEAVTITYCSITKYVDAYQGFSLDLKPYINSI 121
>gi|229587083|ref|YP_002845584.1| hypothetical protein RAF_ORF1017 [Rickettsia africae ESF-5]
gi|228022133|gb|ACP53841.1| Unknown [Rickettsia africae ESF-5]
Length = 158
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++
Sbjct: 2 NIEYKKFVHEYMLEFVKKILTKIQH-ENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQI 60
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
TIV+Q QF +L V D F + +SF+ V E + +PF+A+ F D + N+ L F+
Sbjct: 61 TIVLQYQFENLIVNDTGFSLTVSFNGVKEIIYVPFDALISFVDSNNNYNLTFN 113
>gi|34581280|ref|ZP_00142760.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262665|gb|EAA26169.1| unknown [Rickettsia sibirica 246]
Length = 157
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++
Sbjct: 2 NIEYKKFVHEYMLEFVKKILTKIQH-ENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQI 60
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
TIV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+
Sbjct: 61 TIVLQYQFENLIVNDTGFSLTVSFDGVKEIIYVPFDALISFVDSNNNYSLTFN 113
>gi|238650385|ref|YP_002916237.1| hypothetical protein RPR_01460 [Rickettsia peacockii str. Rustic]
gi|238624483|gb|ACR47189.1| hypothetical protein RPR_01460 [Rickettsia peacockii str. Rustic]
Length = 157
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++T
Sbjct: 3 IEYKKFVHEYMLEFVKKILTKIQH-ENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQIT 61
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
IV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+
Sbjct: 62 IVLQYQFENLIVNDTGFSLTVSFDGVKEIIYVPFDALISFVDSNNNYNLTFN 113
>gi|157964870|ref|YP_001499694.1| hypothetical protein RMA_1146 [Rickettsia massiliae MTU5]
gi|157844646|gb|ABV85147.1| hypothetical protein RMA_1146 [Rickettsia massiliae MTU5]
Length = 170
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++T
Sbjct: 16 IEYKKFVHEYMLEFVKKILTKIQH-ENLYWDQLIYISYRTDNPAVILPSKVKQAYPQQIT 74
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
IV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+
Sbjct: 75 IVLQYQFENLIVNDTGFSLMVSFDGVKEIIYVPFDALISFVDSNNNYSLTFN 126
>gi|157828954|ref|YP_001495196.1| hypothetical protein A1G_06150 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933679|ref|YP_001650468.1| hypothetical protein RrIowa_1322 [Rickettsia rickettsii str. Iowa]
gi|157801435|gb|ABV76688.1| hypothetical protein A1G_06150 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908766|gb|ABY73062.1| hypothetical protein RrIowa_1322 [Rickettsia rickettsii str. Iowa]
Length = 157
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++T
Sbjct: 3 IEYKKFVHEYMLEFVKKILTKIQH-ENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQIT 61
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
IV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F
Sbjct: 62 IVLQYQFENLIVNDTGFSLTVSFDGVKEIIYVPFDALISFVDSNNNYSLTF 112
>gi|239947174|ref|ZP_04698927.1| dephospho-CoA kinase [Rickettsia endosymbiont of Ixodes scapularis]
gi|239921450|gb|EER21474.1| dephospho-CoA kinase [Rickettsia endosymbiont of Ixodes scapularis]
Length = 159
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E + VK +L+++ +L + YI++ T V + +++ YP+++
Sbjct: 2 NIEYKKFVNEYMLEFVKKILTKIQH-ENLYWDQLIYISYRTYNPAVILPSKVKQAYPKQI 60
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
TIV+Q QF +L V D F + +SF +V E + +PF+A+ F D + N+ L F+
Sbjct: 61 TIVLQYQFENLIVNDTGFSLTVSFDDVKEIIYVPFDALISFVDSNNNYSLTFN 113
>gi|15893032|ref|NP_360746.1| hypothetical protein RC1109 [Rickettsia conorii str. Malish 7]
gi|15620233|gb|AAL03647.1| unknown [Rickettsia conorii str. Malish 7]
Length = 157
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++
Sbjct: 2 NIEYKKFVHEYMLEFVKKILTKIQH-ENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQI 60
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
TIV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+
Sbjct: 61 TIVLQYQFENLIVNDTGFSLTVSFDGVKEIIYVPFDALISFVDFNNNYSLTFN 113
>gi|157803405|ref|YP_001491954.1| dephospho-CoA kinase [Rickettsia canadensis str. McKiel]
gi|157784668|gb|ABV73169.1| dephospho-CoA kinase [Rickettsia canadensis str. McKiel]
Length = 159
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 31 RYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTI 90
Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++TI
Sbjct: 4 EYKKFVNEYMLEFVKKILTKIQH-ENLYWDQLIYISYRTDNPAVILPLKVKQAYPKQITI 62
Query: 91 VIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF----DVHIEH 146
V+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F +V H
Sbjct: 63 VLQYQFENLIVNDTGFSLTVSFYGVKEIIYVPFDALISFIDSNNNYSLTFNQLLNVQEYH 122
Query: 147 IEEK-LEGGNTGKVLTSPD 164
EK + + K SP+
Sbjct: 123 QHEKEIRNNKSCKTSLSPN 141
>gi|68171241|ref|ZP_00544644.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Sapulpa]
gi|67999323|gb|EAM85969.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Sapulpa]
Length = 117
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 47/73 (64%)
Query: 69 TNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
T+ +GV + +++ NYP+++T+++Q+QF L+V DN V LSF E +VIP+ +I
Sbjct: 3 THYKGVTLPEHVNNNYPQEITVILQHQFRSLQVFDNSASVVLSFRGKEETVVIPYQSIIK 62
Query: 129 FYDPSVNFELEFD 141
+ D F L+F+
Sbjct: 63 YIDVYQGFVLDFE 75
>gi|195377062|ref|XP_002047311.1| GJ12000 [Drosophila virilis]
gi|194154469|gb|EDW69653.1| GJ12000 [Drosophila virilis]
Length = 1303
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 161 TSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNF 201
TSP NF+KNQ NSV D +S K+ NK K S + NF
Sbjct: 675 TSPLNFEKNQKNSVQFDEPIIRSMKESNKEKQKSAAAKPNF 715
>gi|195015213|ref|XP_001984158.1| GH16282 [Drosophila grimshawi]
gi|193897640|gb|EDV96506.1| GH16282 [Drosophila grimshawi]
Length = 1301
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 23/41 (56%)
Query: 161 TSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNF 201
TSP NF+KNQ NSV D KS K+ NK + I NF
Sbjct: 673 TSPLNFEKNQKNSVQFDEPIVKSLKESNKERENESIEKPNF 713
>gi|123457247|ref|XP_001316352.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121899056|gb|EAY04129.1| hypothetical protein TVAG_125690 [Trichomonas vaginalis G3]
Length = 1463
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 19/87 (21%)
Query: 57 LP-GEHHFYITF--ATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFS 113
LP G++HF + F T R VR+ + K V++N+ + + ++ S
Sbjct: 513 LPIGKNHFPVIFEETTIHRNVRL-------FEIKYNFVVENELPE--------NISIAIS 557
Query: 114 NVPERLVIPFNAIKGF-YDPSVNFELE 139
NV E++ IP N+ KGF YDPS++F ++
Sbjct: 558 NVIEKVSIPSNSKKGFSYDPSLSFSMK 584
>gi|307204592|gb|EFN83243.1| Zinc carboxypeptidase A 1 [Harpegnathos saltator]
Length = 416
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 111 SFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQ 170
S+ N P L++ + + FY+ NF++ ++VHIE+++E ++ + + T +FD
Sbjct: 57 SYVNAPADLMVAPHKLPEFYEMMKNFDIPYNVHIENVQELIDRTTSTQSRTL--SFDFTS 114
Query: 171 TNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+++ + KQ NK+ ++I + +
Sbjct: 115 YHTLDEIYENLDDLAKQYPNKVQTIIGGKTYEGR 148
>gi|321472941|gb|EFX83910.1| hypothetical protein DAPPUDRAFT_239439 [Daphnia pulex]
Length = 273
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYIT 66
I Y+ L +EA+RG+V+ +L EV+ +G L +HFY+T
Sbjct: 238 IDYEELVQEAMRGVVRRILQEVSKMG-LEDPNHFYVT 273
>gi|332827312|gb|EGK00077.1| hypothetical protein HMPREF9455_03601 [Dysgonomonas gadei ATCC
BAA-286]
Length = 539
Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 67 FATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSN-----VPERLVI 121
FA A+GV + +RK + K + + F++L L N F +G F ER I
Sbjct: 191 FAEVAKGVETATYIRKQFLRKGYKIPETSFFEL--LRNQFYIGQIFVREFVDVANERKTI 248
Query: 122 PFNAIKGFYDPSVNFELEFD 141
P + +KG ++P + E E +
Sbjct: 249 PAHYVKGLHEPILKTEKEVE 268
>gi|327266346|ref|XP_003217967.1| PREDICTED: interleukin-17 receptor C-like [Anolis carolinensis]
Length = 982
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 3 SLWNFFSSRWQWFFIIKWIDTLMNYDHIRYDIL-AKEALRGLVKVVLSEVASIGSLPGEH 61
SL ++ +RW I+ W+ TL I + +L KEAL+G ++++ + S G+L G H
Sbjct: 375 SLEKYYRTRW----ILAWMITLFGLCSILFVLLLKKEALKGWLRLLKEDYGSRGALQGRH 430
>gi|152992455|ref|YP_001358176.1| 5-oxoprolinase (ATP-hydrolyzing) [Sulfurovum sp. NBC37-1]
gi|151424316|dbj|BAF71819.1| 5-oxoprolinase (ATP-hydrolyzing) [Sulfurovum sp. NBC37-1]
Length = 1197
Score = 35.0 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYI----TFATNA---- 71
+I+ L++ D YD +E +R L+ + S+ S+ S+P E +I T TNA
Sbjct: 23 YIEKLLSVDPANYDDAPREGIRRLLGRISSDAVSLESVPEESIEWIRMGTTVTTNALLEK 82
Query: 72 RGVRISQNLRKNYPEKMTIVIQN--QFWDLKV 101
+G R + + K + + + I QN + +DL +
Sbjct: 83 KGARTALLITKGFRDLLEIGYQNRPELFDLNI 114
>gi|225423624|ref|XP_002275888.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 469
Score = 35.0 bits (79), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ--NQFWDLK--VLDNHFEVGLSFSNVPERLVIPFNAIK 127
RG+ I N+ P M +++ QF D+ V+D + +G+S + RL IP N
Sbjct: 349 RGLNIVDNMFNGNPSNMKAIVELDGQFTDIDQVVVDRNNAIGMSLKSTVARLTIPGNGTH 408
Query: 128 GFYDPSVNFELEFDVHIEHIEEKLEG-GNTGKVLTSPDNFDKN 169
D S L F I H + + G G +G V S N N
Sbjct: 409 RVADFSS--LLLFPNRINHFQYSVYGQGGSGFVAHSVTNVSNN 449
>gi|297738013|emb|CBI27214.3| unnamed protein product [Vitis vinifera]
Length = 472
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ--NQFWDLK--VLDNHFEVGLSFSNVPERLVIPFNAIK 127
RG+ I N+ P M +++ QF D+ V+D + +G+S + RL IP N
Sbjct: 352 RGLNIVDNMFNGNPSNMKAIVELDGQFTDIDQVVVDRNNAIGMSLKSTVARLTIPGNGTH 411
Query: 128 GFYDPSVNFELEFDVHIEHIEEKLEG-GNTGKVLTSPDNFDKN 169
D S L F I H + + G G +G V S N N
Sbjct: 412 RVADFSS--LLLFPNRINHFQYSVYGQGGSGFVAHSVTNVSNN 452
>gi|206890269|ref|YP_002248035.1| hypothetical protein THEYE_A0185 [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206742207|gb|ACI21264.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 150
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 97 WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEK 150
WD ++ L F N PE+ IP NAI G + P + +L V I+++
Sbjct: 68 WD----EDAITATLVFGNTPEKCYIPINAIAGVFSPDLRVQLAVPVFKSKIKDE 117
>gi|147818110|emb|CAN67112.1| hypothetical protein VITISV_025311 [Vitis vinifera]
Length = 436
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ--NQFWDLK--VLDNHFEVGLSFSNVPERLVIPFNAIK 127
RG+ I N+ P M +++ QF D+ V+D + +G+S + RL IP N
Sbjct: 316 RGLNIVDNMFNGNPSNMKAIVELDGQFTDIDQVVVDRNNAIGMSLKSTVARLTIPGNGTH 375
Query: 128 GFYDPSVNFELEFDVHIEHIEEKLEG-GNTGKVLTSPDNFDKN 169
D S L F I H + + G G +G V S N N
Sbjct: 376 RVADFSS--LLLFPNRINHFQYSVYGQGGSGFVAHSVTNVSNN 416
Searching..................................................done
Results from round 2
>gi|254780955|ref|YP_003065368.1| hypothetical protein CLIBASIA_04270 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040632|gb|ACT57428.1| hypothetical protein CLIBASIA_04270 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 204
Score = 319 bits (819), Expect = 1e-85, Method: Composition-based stats.
Identities = 204/204 (100%), Positives = 204/204 (100%)
Query: 1 MVSLWNFFSSRWQWFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGE 60
MVSLWNFFSSRWQWFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGE
Sbjct: 1 MVSLWNFFSSRWQWFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGE 60
Query: 61 HHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLV 120
HHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLV
Sbjct: 61 HHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLV 120
Query: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK
Sbjct: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
Query: 181 KKSTKKQNKNKMASVISLDNFRKK 204
KKSTKKQNKNKMASVISLDNFRKK
Sbjct: 181 KKSTKKQNKNKMASVISLDNFRKK 204
>gi|15965886|ref|NP_386239.1| hypothetical protein SMc01450 [Sinorhizobium meliloti 1021]
gi|307309645|ref|ZP_07589298.1| protein of unknown function DUF1321 [Sinorhizobium meliloti BL225C]
gi|307321783|ref|ZP_07601171.1| protein of unknown function DUF1321 [Sinorhizobium meliloti AK83]
gi|15075155|emb|CAC46712.1| Hypothetical protein SMc01450 [Sinorhizobium meliloti 1021]
gi|306892605|gb|EFN23403.1| protein of unknown function DUF1321 [Sinorhizobium meliloti AK83]
gi|306899980|gb|EFN30602.1| protein of unknown function DUF1321 [Sinorhizobium meliloti BL225C]
Length = 171
Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats.
Identities = 99/180 (55%), Positives = 133/180 (73%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EV++ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVSATGHLPGDHHFFITFLTGAPGVRISQHLKAKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWDLKV + FE+GLSFS+ PE+LVIP+NAI+GFYDPSVNFELEFDV
Sbjct: 61 PEQMTIVVQHQFWDLKVTETGFEIGLSFSDTPEKLVIPYNAIRGFYDPSVNFELEFDVAA 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ E ++ ++ P + T + + D+++K K ASV+SLD+FRKK
Sbjct: 121 ----GEEEAADSAEITAYPLD---EATETATDDNTEKPD---GPKGGGASVVSLDSFRKK 170
>gi|158426109|ref|YP_001527401.1| hypothetical protein AZC_4485 [Azorhizobium caulinodans ORS 571]
gi|158332998|dbj|BAF90483.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
Length = 217
Score = 260 bits (665), Expect = 8e-68, Method: Composition-based stats.
Identities = 92/205 (44%), Positives = 126/205 (61%), Gaps = 14/205 (6%)
Query: 13 QWFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNAR 72
+W + DHIRYD+LA+EALRG+V+ VLS+VA G LPG+HHFYI+F T A
Sbjct: 14 RWIRPEPSAGPMPPVDHIRYDLLAQEALRGVVRRVLSDVARDG-LPGDHHFYISFDTRAP 72
Query: 73 GVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDP 132
GVR+SQ +R+ YPE MTIV+Q+QFWDL V ++ EVGLSF VPE+L+IPF+A+KGF+DP
Sbjct: 73 GVRLSQRMREQYPEDMTIVLQHQFWDLNVTEHAVEVGLSFGGVPEKLLIPFSAMKGFFDP 132
Query: 133 SVNFELEFDVHIEHIEEKLEG-------------GNTGKVLTSPDNFDKNQTNSVSQDSS 179
SV F L+FD+ E +L+G G G ++P +V+
Sbjct: 133 SVKFGLQFDLGTPEEEPELDGVQDTEASAPVPLAGAKGSKASAPKLRGAASEPAVASAGG 192
Query: 180 KKKSTKKQNKNKMASVISLDNFRKK 204
+ + + + A V+ LD FRKK
Sbjct: 193 SDEKPEGEPSSGGAEVVRLDVFRKK 217
>gi|150397228|ref|YP_001327695.1| hypothetical protein Smed_2027 [Sinorhizobium medicae WSM419]
gi|150028743|gb|ABR60860.1| protein of unknown function DUF1321 [Sinorhizobium medicae WSM419]
Length = 171
Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats.
Identities = 98/180 (54%), Positives = 131/180 (72%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EV++ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVSATGHLPGDHHFFITFLTGAPGVRISQHLKAKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWDLKV + FE+GLSFS+ PE+LVIP+NAI+GFYDPSVNFELEFDV
Sbjct: 61 PEQMTIVVQHQFWDLKVTETGFEIGLSFSDTPEKLVIPYNAIRGFYDPSVNFELEFDVAA 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+E T + + + SV+ ++++K K AS++SLD+FRKK
Sbjct: 121 SEEQETDSAEITAYPV-------EETSESVTDENTEK---PDGPKGGGASIVSLDSFRKK 170
>gi|163758988|ref|ZP_02166074.1| hypothetical protein HPDFL43_04470 [Hoeflea phototrophica DFL-43]
gi|162283392|gb|EDQ33677.1| hypothetical protein HPDFL43_04470 [Hoeflea phototrophica DFL-43]
Length = 204
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 95/188 (50%), Positives = 128/188 (68%), Gaps = 6/188 (3%)
Query: 23 TLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRK 82
LM DHIRYDILA++ALRG+++ VLSEVA+ G LPG+HHF+ITF T A GVRIS L++
Sbjct: 16 ALMPQDHIRYDILAQDALRGVIRKVLSEVAATGYLPGDHHFFITFLTEAPGVRISTQLKE 75
Query: 83 NYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV 142
YPE+MTIV+Q+QFWDLK+ ++ FE+GLSFS+ PE+LV+PF+AI+GFYDPSVNFELEFD
Sbjct: 76 RYPEQMTIVVQHQFWDLKISESQFEIGLSFSDKPEKLVVPFSAIRGFYDPSVNFELEFDT 135
Query: 143 HIEH------IEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
+E ++ E + + +D+ + +K A V+
Sbjct: 136 VLEDAANDGGDQDGDERNELASTIERLVEPSAKDDAATGEDAETGDEGEDGDKKPGADVV 195
Query: 197 SLDNFRKK 204
SLD+FRKK
Sbjct: 196 SLDSFRKK 203
>gi|86358404|ref|YP_470296.1| hypothetical protein RHE_CH02800 [Rhizobium etli CFN 42]
gi|86282506|gb|ABC91569.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 171
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 103/180 (57%), Positives = 129/180 (71%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVATTGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE G T + S D+ + + K SV+SLD+FRKK
Sbjct: 121 ADGEELPSGEITAYPVDSAGKPDEAAGAKPA----------DGEEKKPGSVVSLDSFRKK 170
>gi|218463519|ref|ZP_03503610.1| hypothetical protein RetlK5_30634 [Rhizobium etli Kim 5]
Length = 171
Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats.
Identities = 102/180 (56%), Positives = 130/180 (72%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVATTGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE +G++ P + D + + K SV+SLD+FRKK
Sbjct: 121 ADGEELP----SGEITAYPVDAAGKP------DETAGAKPADGEEKKPGSVVSLDSFRKK 170
>gi|227822603|ref|YP_002826575.1| hypothetical protein NGR_c20590 [Sinorhizobium fredii NGR234]
gi|227341604|gb|ACP25822.1| hypothetical protein NGR_c20590 [Sinorhizobium fredii NGR234]
Length = 170
Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats.
Identities = 97/180 (53%), Positives = 126/180 (70%), Gaps = 11/180 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVAATGHLPGDHHFFITFLTGAPGVRISQHLKAKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFW+LKV + FE+GLSFS+ PE+LVIPFNA++GFYDPSVNFELEFDV
Sbjct: 61 PEQMTIVVQHQFWELKVSETGFEIGLSFSDTPEKLVIPFNAVRGFYDPSVNFELEFDVAS 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+E + ++ P N + + K K SV+SLD+FRKK
Sbjct: 121 GEEDE----SESAEITAYPVNEADDAS-------QKGPGPDGAPKGGGGSVVSLDSFRKK 169
>gi|218507824|ref|ZP_03505702.1| hypothetical protein RetlB5_09535 [Rhizobium etli Brasil 5]
gi|327189903|gb|EGE57034.1| hypothetical protein RHECNPAF_5110016 [Rhizobium etli CNPAF512]
Length = 171
Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats.
Identities = 102/180 (56%), Positives = 129/180 (71%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVATTGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE G T + + + D + + K SV+SLD+FRKK
Sbjct: 121 ADGEELPSGEITAYPVDA----------AAKPDETAGAKPADGEEKKPGSVVSLDSFRKK 170
>gi|222149085|ref|YP_002550042.1| hypothetical protein Avi_2824 [Agrobacterium vitis S4]
gi|221736070|gb|ACM37033.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 169
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 103/180 (57%), Positives = 130/180 (72%), Gaps = 12/180 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPGEHHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLTEVAATGRLPGEHHFFITFLTGAPGVRISQHLKAKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
E+MTIVIQ+QFWDLKV D+ FEVGLSFS+ PE+LVIPFNAI+GFYDPSVNFELEFDV
Sbjct: 61 AEQMTIVIQHQFWDLKVTDSLFEVGLSFSDTPEKLVIPFNAIRGFYDPSVNFELEFDVP- 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ E N+ ++ P + ++ + D K + + K SV+SLD FRKK
Sbjct: 120 ----QVEEDENSAEITAYPLAAESEKSEDGAAD-------KPEGEKKEGSVVSLDAFRKK 168
>gi|190892529|ref|YP_001979071.1| hypothetical protein RHECIAT_CH0002944 [Rhizobium etli CIAT 652]
gi|190697808|gb|ACE91893.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 171
Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats.
Identities = 101/180 (56%), Positives = 129/180 (71%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVATTGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E+ G T + + + D + + K SV+SLD+FRKK
Sbjct: 121 ADGEDLPSGEITAYPVDA----------AAKPDETAGAKPADGEEKKPGSVVSLDSFRKK 170
>gi|222086398|ref|YP_002544932.1| hypothetical protein Arad_2936 [Agrobacterium radiobacter K84]
gi|221723846|gb|ACM27002.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 169
Score = 254 bits (648), Expect = 6e-66, Method: Composition-based stats.
Identities = 101/180 (56%), Positives = 131/180 (72%), Gaps = 12/180 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EV + G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLTEVGATGRLPGDHHFFITFLTGAPGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ ++ FE+GLSFS+VPE+LV+PFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITESLFEIGLSFSDVPEKLVVPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE TG++ P + ++ V K+ + K SV+SLD FRKK
Sbjct: 121 ADDEEMP----TGEITAYPVAAEGSEEPVV--------EAKEGEEKKPGSVVSLDAFRKK 168
>gi|241205507|ref|YP_002976603.1| hypothetical protein Rleg_2803 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859397|gb|ACS57064.1| protein of unknown function DUF1321 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 171
Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats.
Identities = 101/180 (56%), Positives = 128/180 (71%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVAATGRLPGDHHFFITFLTGATGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWD+K+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDMKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE G T + + D + + K SV+SLD+FRKK
Sbjct: 121 ADGEELPSGEITAYPVDAASKPDDAAGAKTA----------DGEEKKPGSVVSLDSFRKK 170
>gi|209550126|ref|YP_002282043.1| hypothetical protein Rleg2_2544 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535882|gb|ACI55817.1| protein of unknown function DUF1321 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 171
Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats.
Identities = 101/180 (56%), Positives = 129/180 (71%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EV + G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVGATGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ ++HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITESHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE G T + + D+ + + K SV+SLD+FRKK
Sbjct: 121 ADGEELPSGEITAYPVDAAAKPDEAAGAKPA----------DGEEKKPGSVVSLDSFRKK 170
>gi|116253000|ref|YP_768838.1| hypothetical protein RL3257 [Rhizobium leguminosarum bv. viciae
3841]
gi|115257648|emb|CAK08745.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 171
Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats.
Identities = 101/180 (56%), Positives = 128/180 (71%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVAATGRLPGDHHFFITFLTGATGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWD+K+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDMKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE G T + + D + + K SV+SLD+FRKK
Sbjct: 121 ADGEELPSGEITAYPVDAAGKPDDAAGAKPA----------DGEEKKPGSVVSLDSFRKK 170
>gi|306843249|ref|ZP_07475859.1| Hypothetical protein BIBO2_3005 [Brucella sp. BO2]
gi|306844303|ref|ZP_07476895.1| Hypothetical protein BIBO1_0974 [Brucella sp. BO1]
gi|306275375|gb|EFM57116.1| Hypothetical protein BIBO1_0974 [Brucella sp. BO1]
gi|306286572|gb|EFM58151.1| Hypothetical protein BIBO2_3005 [Brucella sp. BO2]
Length = 189
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 98/190 (51%), Positives = 127/190 (66%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKVLT-SPDNFDKNQTNSVSQDSSKKKST---------KKQNKNKMAS 194
+ GN + +P+ DK + + + KK+S + + A
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPSAD 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|254719437|ref|ZP_05181248.1| hypothetical protein Bru83_07818 [Brucella sp. 83/13]
gi|265984441|ref|ZP_06097176.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839214|ref|ZP_07472031.1| Hypothetical protein BROD_2062 [Brucella sp. NF 2653]
gi|264663033|gb|EEZ33294.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306405761|gb|EFM62023.1| Hypothetical protein BROD_2062 [Brucella sp. NF 2653]
Length = 189
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 97/190 (51%), Positives = 127/190 (66%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKVLT-SPDNFDKNQTNSVSQDSSKKKST---------KKQNKNKMAS 194
+ GN + +P+ +K + + + KK+S + + A
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKANKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPSAD 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|148560026|ref|YP_001259299.1| hypothetical protein BOV_1361 [Brucella ovis ATCC 25840]
gi|254702125|ref|ZP_05163953.1| hypothetical protein Bsuib55_14874 [Brucella suis bv. 5 str. 513]
gi|254708077|ref|ZP_05169905.1| hypothetical protein BpinM_14262 [Brucella pinnipedialis
M163/99/10]
gi|254710447|ref|ZP_05172258.1| hypothetical protein BpinB_09312 [Brucella pinnipedialis B2/94]
gi|254714440|ref|ZP_05176251.1| hypothetical protein BcetM6_14093 [Brucella ceti M644/93/1]
gi|254717338|ref|ZP_05179149.1| hypothetical protein BcetM_13222 [Brucella ceti M13/05/1]
gi|256031941|ref|ZP_05445555.1| hypothetical protein BpinM2_15084 [Brucella pinnipedialis
M292/94/1]
gi|256061462|ref|ZP_05451606.1| hypothetical protein Bneo5_14000 [Brucella neotomae 5K33]
gi|256160139|ref|ZP_05457833.1| hypothetical protein BcetM4_14094 [Brucella ceti M490/95/1]
gi|256255345|ref|ZP_05460881.1| hypothetical protein BcetB_13864 [Brucella ceti B1/94]
gi|256369820|ref|YP_003107331.1| hypothetical protein BMI_I1416 [Brucella microti CCM 4915]
gi|260169077|ref|ZP_05755888.1| hypothetical protein BruF5_12099 [Brucella sp. F5/99]
gi|261219167|ref|ZP_05933448.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261222547|ref|ZP_05936828.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261315578|ref|ZP_05954775.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261318017|ref|ZP_05957214.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261322228|ref|ZP_05961425.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261325469|ref|ZP_05964666.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261752696|ref|ZP_05996405.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261758583|ref|ZP_06002292.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265989048|ref|ZP_06101605.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265998512|ref|ZP_06111069.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|148371283|gb|ABQ61262.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|255999983|gb|ACU48382.1| hypothetical protein BMI_I1416 [Brucella microti CCM 4915]
gi|260921131|gb|EEX87784.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260924256|gb|EEX90824.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294918|gb|EEX98414.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261297240|gb|EEY00737.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261301449|gb|EEY04946.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261304604|gb|EEY08101.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261738567|gb|EEY26563.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261742449|gb|EEY30375.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|262553136|gb|EEZ08970.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264661245|gb|EEZ31506.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 189
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 98/190 (51%), Positives = 128/190 (67%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKVLT-SPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM---------AS 194
+ GN + +P+ DK + + + KK+S ++ + A
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPTAD 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|17986886|ref|NP_539520.1| hypothetical protein BMEI0603 [Brucella melitensis bv. 1 str. 16M]
gi|225852886|ref|YP_002733119.1| hypothetical protein BMEA_A1452 [Brucella melitensis ATCC 23457]
gi|256045035|ref|ZP_05447936.1| hypothetical protein Bmelb1R_11134 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256263632|ref|ZP_05466164.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260565366|ref|ZP_05835850.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265991462|ref|ZP_06104019.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|17982527|gb|AAL51784.1| hypothetical protein BMEI0603 [Brucella melitensis bv. 1 str. 16M]
gi|225641251|gb|ACO01165.1| protein of unknown function DUF1321 [Brucella melitensis ATCC
23457]
gi|260151434|gb|EEW86528.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|263002246|gb|EEZ14821.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263093683|gb|EEZ17688.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|326409428|gb|ADZ66493.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326539135|gb|ADZ87350.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 189
Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats.
Identities = 97/190 (51%), Positives = 127/190 (66%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+E A G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEAAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKVLT-SPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM---------AS 194
+ GN + +P+ DK + + + KK+S ++ + A
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPTAD 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|325293417|ref|YP_004279281.1| hypothetical protein AGROH133_07312 [Agrobacterium sp. H13-3]
gi|325061270|gb|ADY64961.1| hypothetical protein AGROH133_07312 [Agrobacterium sp. H13-3]
Length = 170
Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats.
Identities = 98/180 (54%), Positives = 128/180 (71%), Gaps = 11/180 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
E+MTIVIQ+QFWDLKV + FE+GLSFS+ PE+LV+P+NAI+GFYDPSVNFELEFDV +
Sbjct: 61 AEQMTIVIQHQFWDLKVTEIGFEIGLSFSDTPEKLVVPYNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE E T ++ ++ ++ ++ K + K SV+SLD FRKK
Sbjct: 121 ADEEELEEAEITAYPVSH-----------EAKPATTSETPKSGEEKKEGSVVSLDAFRKK 169
>gi|23502275|ref|NP_698402.1| hypothetical protein BR1404 [Brucella suis 1330]
gi|161619352|ref|YP_001593239.1| hypothetical protein BCAN_A1437 [Brucella canis ATCC 23365]
gi|163843660|ref|YP_001628064.1| hypothetical protein BSUIS_A1456 [Brucella suis ATCC 23445]
gi|254704662|ref|ZP_05166490.1| hypothetical protein Bsuib36_12237 [Brucella suis bv. 3 str. 686]
gi|260566090|ref|ZP_05836560.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261755356|ref|ZP_05999065.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|23348249|gb|AAN30317.1| conserved hypothetical protein [Brucella suis 1330]
gi|161336163|gb|ABX62468.1| protein of unknown function DUF1321 [Brucella canis ATCC 23365]
gi|163674383|gb|ABY38494.1| protein of unknown function DUF1321 [Brucella suis ATCC 23445]
gi|260155608|gb|EEW90688.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261745109|gb|EEY33035.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 189
Score = 251 bits (640), Expect = 6e-65, Method: Composition-based stats.
Identities = 98/190 (51%), Positives = 128/190 (67%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFFTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKVLT-SPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM---------AS 194
+ GN + +P+ DK + + + KK+S ++ + A
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPTAD 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|15889336|ref|NP_355017.1| hypothetical protein Atu8171 [Agrobacterium tumefaciens str. C58]
gi|15157176|gb|AAK87802.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 168
Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats.
Identities = 98/180 (54%), Positives = 125/180 (69%), Gaps = 13/180 (7%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
E+MTIVIQ+QFWD+KV + FE+GLSFS+ PE+LVIP+NAI+GFYDPSVNFELEFDV +
Sbjct: 61 AEQMTIVIQHQFWDMKVTETGFEIGLSFSDTPEKLVIPYNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE E T ++ + ++ K + K SV+SLD FRKK
Sbjct: 121 AEEEEMEEAEITAYPVSH-------------EAKPASETPKSGEEKKEGSVVSLDAFRKK 167
>gi|62290297|ref|YP_222090.1| hypothetical protein BruAb1_1399 [Brucella abortus bv. 1 str.
9-941]
gi|82700221|ref|YP_414795.1| hypothetical protein BAB1_1423 [Brucella melitensis biovar Abortus
2308]
gi|189024531|ref|YP_001935299.1| hypothetical protein BAbS19_I13300 [Brucella abortus S19]
gi|237815806|ref|ZP_04594803.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254689599|ref|ZP_05152853.1| hypothetical protein Babob68_05389 [Brucella abortus bv. 6 str.
870]
gi|254694089|ref|ZP_05155917.1| hypothetical protein Babob3T_05384 [Brucella abortus bv. 3 str.
Tulya]
gi|254697741|ref|ZP_05159569.1| hypothetical protein Babob28_08558 [Brucella abortus bv. 2 str.
86/8/59]
gi|254730630|ref|ZP_05189208.1| hypothetical protein Babob42_05414 [Brucella abortus bv. 4 str.
292]
gi|256257848|ref|ZP_05463384.1| hypothetical protein Babob9C_10986 [Brucella abortus bv. 9 str.
C68]
gi|260546840|ref|ZP_05822579.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260755127|ref|ZP_05867475.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758346|ref|ZP_05870694.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260762172|ref|ZP_05874515.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884139|ref|ZP_05895753.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214388|ref|ZP_05928669.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|297248685|ref|ZP_06932403.1| hypothetical protein BAYG_01650 [Brucella abortus bv. 5 str. B3196]
gi|62196429|gb|AAX74729.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616322|emb|CAJ11379.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|189020103|gb|ACD72825.1| hypothetical protein BAbS19_I13300 [Brucella abortus S19]
gi|237789104|gb|EEP63315.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260095890|gb|EEW79767.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260668664|gb|EEX55604.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260672604|gb|EEX59425.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675235|gb|EEX62056.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260873667|gb|EEX80736.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260915995|gb|EEX82856.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|297175854|gb|EFH35201.1| hypothetical protein BAYG_01650 [Brucella abortus bv. 5 str. B3196]
Length = 189
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 97/190 (51%), Positives = 127/190 (66%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+E A G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEAAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKVLT-SPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM---------AS 194
+ GN + +P+ DK + + + KK+S ++ + A
Sbjct: 120 FQPASDNDEGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPTAD 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|294852731|ref|ZP_06793404.1| hypothetical protein BAZG_01663 [Brucella sp. NVSL 07-0026]
gi|294821320|gb|EFG38319.1| hypothetical protein BAZG_01663 [Brucella sp. NVSL 07-0026]
Length = 189
Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 97/190 (51%), Positives = 127/190 (66%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKVLT-SPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM---------AS 194
+ GN + +P+ DK + + + KK+S ++ + A
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPTAD 179
Query: 195 VISLDNFRKK 204
V+ LD FRKK
Sbjct: 180 VVLLDAFRKK 189
>gi|75676537|ref|YP_318958.1| hypothetical protein Nwi_2352 [Nitrobacter winogradskyi Nb-255]
gi|74421407|gb|ABA05606.1| Protein of unknown function DUF1321 [Nitrobacter winogradskyi
Nb-255]
Length = 182
Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats.
Identities = 86/183 (46%), Positives = 116/183 (63%), Gaps = 4/183 (2%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+L +A+RG+++ VL++ A G LPGEHHF+ITF + A GV IS L Y
Sbjct: 1 MPTDHIRYDLLTSDAMRGVLRRVLTDAAERG-LPGEHHFFITFKSKADGVTISPRLLTQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTI++Q+QFWDL V ++HFEVGLSF VPERLV+PF+AIK F+DPSV F L+F+
Sbjct: 60 PEEMTIILQHQFWDLIVTEDHFEVGLSFGGVPERLVVPFSAIKSFFDPSVQFGLQFEPAE 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK---MASVISLDNF 201
+ + + P +V D S+ + + +NK K A V+ LD F
Sbjct: 120 TGEAQAEKAETEETSTSEPSTAPSPTALAVPADPSQPAAAESENKPKPGQGAEVVRLDRF 179
Query: 202 RKK 204
RKK
Sbjct: 180 RKK 182
>gi|153009103|ref|YP_001370318.1| hypothetical protein Oant_1773 [Ochrobactrum anthropi ATCC 49188]
gi|151560991|gb|ABS14489.1| protein of unknown function DUF1321 [Ochrobactrum anthropi ATCC
49188]
Length = 194
Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats.
Identities = 97/195 (49%), Positives = 121/195 (62%), Gaps = 16/195 (8%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L +PF+A++GFYDPSVNFELEFDV I
Sbjct: 60 PEQMTIVLQHQFWDMLVTDQLFEVGLSFGDIPEKLTVPFSAVRGFYDPSVNFELEFDVAI 119
Query: 145 EHIE-EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK--------------KKSTKKQNK 189
E + EGGN + P + S K +
Sbjct: 120 AQPESDNDEGGNVAPIEILPTEAPVEKAEKPKSKSRKTAAEKEAAAAKDNNADDGTDKEA 179
Query: 190 NKMASVISLDNFRKK 204
A V+SLD FRKK
Sbjct: 180 KPSADVVSLDAFRKK 194
>gi|92118241|ref|YP_577970.1| hypothetical protein Nham_2731 [Nitrobacter hamburgensis X14]
gi|91801135|gb|ABE63510.1| protein of unknown function DUF1321 [Nitrobacter hamburgensis X14]
Length = 202
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 87/185 (47%), Positives = 119/185 (64%), Gaps = 5/185 (2%)
Query: 21 IDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNL 80
+D M+ DHIRYD+LA++ALRG+++ VL++ A G LPGEHHF+ITF + A GV+IS L
Sbjct: 22 MDQPMSTDHIRYDLLARDALRGVLRRVLTDAAEQG-LPGEHHFFITFMSKADGVKISPRL 80
Query: 81 RKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
+PE+MTI++Q+QFWDL V + FEVGLSF +PERLV+PFN+IK FYDPSV F L+F
Sbjct: 81 LAQHPEEMTIILQHQFWDLTVSEERFEVGLSFGGIPERLVVPFNSIKSFYDPSVQFGLQF 140
Query: 141 DVHI-EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
+ E + G + SP T S + ++ K ++ A V+ LD
Sbjct: 141 EPAETETAAADMPPGAPSPAVPSPAVLAVPDTPS---PPAAAETEDKPKPSEGAEVVRLD 197
Query: 200 NFRKK 204
FRKK
Sbjct: 198 RFRKK 202
>gi|239832281|ref|ZP_04680610.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239824548|gb|EEQ96116.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 193
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 95/194 (48%), Positives = 121/194 (62%), Gaps = 15/194 (7%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L +PF+A++GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTVPFSAVRGFYDPSVNFELEFDVAV 119
Query: 145 EHIE-EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK-------------KKSTKKQNKN 190
E + EGGN + + + S K +
Sbjct: 120 SQPESDNDEGGNVAPIEIASTEAPVEKAEKPKSKSRKTAAEKEAAASKDSNTDEADKEAK 179
Query: 191 KMASVISLDNFRKK 204
A V+SLD FRKK
Sbjct: 180 PSADVVSLDAFRKK 193
>gi|13471488|ref|NP_103054.1| hypothetical protein mlr1474 [Mesorhizobium loti MAFF303099]
gi|14022230|dbj|BAB48840.1| mlr1474 [Mesorhizobium loti MAFF303099]
Length = 178
Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 100/180 (55%), Positives = 122/180 (67%), Gaps = 2/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVR+S LR+ Y
Sbjct: 1 MADDHIRYDILAQEALRGVMRKVLAEVARTG-LPGNHHFFITFLTGAPGVRVSSRLRERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ Q+WDLKV D FEVGLSFS+VPE+L IPF+A++GFYDPSVNFELEFDV
Sbjct: 60 PEQMTIVIQFQYWDLKVTDTGFEVGLSFSDVPEKLEIPFSAVRGFYDPSVNFELEFDVKT 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ E+ + LT + +KK + K A V+SLD FRKK
Sbjct: 120 DAQPEEEPAQPASEPLTIVSEKKPKAEKKAAA-EPEKKPAATEAGAKGAEVVSLDAFRKK 178
>gi|85714700|ref|ZP_01045687.1| hypothetical protein NB311A_20996 [Nitrobacter sp. Nb-311A]
gi|85698585|gb|EAQ36455.1| hypothetical protein NB311A_20996 [Nitrobacter sp. Nb-311A]
Length = 181
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 86/183 (46%), Positives = 117/183 (63%), Gaps = 5/183 (2%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+L +A+RG+++ VL++ A G LPGEHHF+ITF + A GV IS L Y
Sbjct: 1 MPTDHIRYDLLTSDAMRGVLRRVLTDAAEHG-LPGEHHFFITFMSKADGVTISSRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTI++Q+QFWDL V ++HFEVGLSF VPERLV+PF+AIK F+DPSV F L+F+
Sbjct: 60 PEEMTIILQHQFWDLTVTEDHFEVGLSFGGVPERLVVPFSAIKSFFDPSVQFGLQFE-PA 118
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK---MASVISLDNF 201
E + + E + P + D S+ + + ++K K A V+ LD F
Sbjct: 119 ETEKAETEKAEIETNASEPSTAPSPTALAAPADHSQPTAAETEDKPKPGQGAEVVRLDRF 178
Query: 202 RKK 204
RKK
Sbjct: 179 RKK 181
>gi|91977825|ref|YP_570484.1| hypothetical protein RPD_3359 [Rhodopseudomonas palustris BisB5]
gi|91684281|gb|ABE40583.1| protein of unknown function DUF1321 [Rhodopseudomonas palustris
BisB5]
Length = 194
Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 84/196 (42%), Positives = 118/196 (60%), Gaps = 6/196 (3%)
Query: 9 SSRWQWFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFA 68
S R + M DHIRYD+LA+EALRG+++ VL++VA G LPGEHHF+ITF
Sbjct: 5 SDRTRRTQDKADTGQFMATDHIRYDVLAREALRGVLRQVLTDVAQHG-LPGEHHFFITFL 63
Query: 69 TNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
+ A GVR+S L YPE+MT+++Q+QFWDL V ++ FEVGLSF +PERLV+PF+AIK
Sbjct: 64 SKADGVRLSTRLLAQYPEEMTVILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFSAIKS 123
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQN 188
F+DPSV F L+F+ + E + ++ + ++
Sbjct: 124 FFDPSVQFGLQFETN-----EGAAETADASAPEIAAPAATPAMLAATESAPTDAGDEEPV 178
Query: 189 KNKMASVISLDNFRKK 204
K++ A V+ LD FRKK
Sbjct: 179 KSEGAEVVRLDRFRKK 194
>gi|90419199|ref|ZP_01227109.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336136|gb|EAS49877.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 189
Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 98/189 (51%), Positives = 128/189 (67%), Gaps = 10/189 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ V+ EV G LPG+HHF+ITF T A GVRIS LR+ Y
Sbjct: 1 MGQDHIRYDVLAQDALRGVIRKVIGEVVKTG-LPGDHHFFITFLTTAPGVRISSRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVH- 143
PE MTIVIQ+Q+WDL+V D FEVGLSFS++PERL+IPF AI+GFYDP+VNFELEFDV
Sbjct: 60 PELMTIVIQHQYWDLQVTDTSFEVGLSFSDIPERLLIPFAAIRGFYDPAVNFELEFDVRG 119
Query: 144 IEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK--------STKKQNKNKMASV 195
++ E+ EG + G Q + ++ +K+K + + K A V
Sbjct: 120 MDAANEQSEGADDGDTDEIGTASPPAQILTPTKLHAKEKVAAAPASDDASQSEEKKDAEV 179
Query: 196 ISLDNFRKK 204
+SLD FRKK
Sbjct: 180 VSLDAFRKK 188
>gi|170750912|ref|YP_001757172.1| hypothetical protein Mrad2831_4523 [Methylobacterium radiotolerans
JCM 2831]
gi|170657434|gb|ACB26489.1| protein of unknown function DUF1321 [Methylobacterium radiotolerans
JCM 2831]
Length = 208
Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats.
Identities = 88/210 (41%), Positives = 119/210 (56%), Gaps = 33/210 (15%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFY++F T A GVR+SQ LR+ Y
Sbjct: 1 MADDLIRYDLLVQDALRGVVRKVLTDAAREG-LMGEHHFYVSFRTEAPGVRMSQALREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL++PF+A+ GF+DPSV F L+FD+
Sbjct: 60 PQDMTIVLQHQFWDLNVTEHAFEVGLSFSGVPERLLVPFDALSGFFDPSVQFGLKFDLS- 118
Query: 145 EHIEEKLEGGNTGKVLTSP------------------------------DNFDKNQTNSV 174
E E N P +
Sbjct: 119 -EAGETPEEANAAPAKPGPRGAGSEPGEVRPKSAGLATIGASAPKGLPAPAAQGEKAAGK 177
Query: 175 SQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ D + + + KK+ + A V+SLD FRKK
Sbjct: 178 ADDKAPRPAAKKEGEEGSAEVVSLDAFRKK 207
>gi|39936561|ref|NP_948837.1| hypothetical protein RPA3499 [Rhodopseudomonas palustris CGA009]
gi|39650417|emb|CAE28940.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
Length = 178
Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats.
Identities = 86/180 (47%), Positives = 122/180 (67%), Gaps = 2/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VL++VA G LPGEHHF+ITF + GV++S L Y
Sbjct: 1 MATDHIRYDVLARDALRGVLRHVLTDVAQHG-LPGEHHFFITFQSKGDGVKLSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MT+V+Q+QFWDL V ++ FEVGLSF +PERLV+PF +IK F+DPSV F L+F+
Sbjct: 60 PEEMTVVLQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFASIKSFFDPSVKFGLQFEAAD 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E ++E E + +++T+ T+S + DSS + + A V+ LD FRKK
Sbjct: 120 E-VDETGEADDGTELVTAAPAPVALPTSSATTDSSAPSDDEPPRSGEGAEVVRLDRFRKK 178
>gi|118590865|ref|ZP_01548265.1| hypothetical protein SIAM614_19431 [Stappia aggregata IAM 12614]
gi|118436387|gb|EAV43028.1| hypothetical protein SIAM614_19431 [Stappia aggregata IAM 12614]
Length = 191
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 88/191 (46%), Positives = 120/191 (62%), Gaps = 12/191 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D +RYDIL ++ALRG VK +L+EV G LPG+HHFYI F TNA GVRISQ L++ Y
Sbjct: 1 MSEDLLRYDILIQDALRGAVKKILAEVGRTG-LPGDHHFYIAFDTNAPGVRISQRLKERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV-- 142
P++MTIV+Q+QFWDL + ++ FEVGLSF VPE+L++PF+AIKGF+DPSV F LEFD
Sbjct: 60 PQEMTIVLQHQFWDLAIGEHAFEVGLSFGGVPEKLLVPFSAIKGFFDPSVQFALEFDPGK 119
Query: 143 ---------HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
E G D + ++ + ++ +K + +N +
Sbjct: 120 TAEELPEELLEAVEELARAEQEHGDNEAKQDEGNGDREAASAEPKAKPAAQATENSDGGG 179
Query: 194 SVISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 EVVSLDAFRKK 190
>gi|319782907|ref|YP_004142383.1| hypothetical protein Mesci_3209 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168795|gb|ADV12333.1| hypothetical protein Mesci_3209 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 178
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 100/180 (55%), Positives = 121/180 (67%), Gaps = 2/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVR+S LR+ Y
Sbjct: 1 MADDHIRYDILAQEALRGVMRKVLAEVARTG-LPGNHHFFITFLTGAPGVRVSSRLRERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ Q+WDLKV D FEVGLSFS+VPE+L IPF+A++GFYDPSVNFELEFDV
Sbjct: 60 PEQMTIVIQFQYWDLKVTDTGFEVGLSFSDVPEKLEIPFSAVRGFYDPSVNFELEFDVKT 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ T + LT + ++KK K A V+SLD FRKK
Sbjct: 120 DGAAADEPAAPTPEPLTIVSEKKPKAEKKAAA-EAEKKPAAADAATKGAEVVSLDAFRKK 178
>gi|110634332|ref|YP_674540.1| hypothetical protein Meso_1982 [Mesorhizobium sp. BNC1]
gi|110285316|gb|ABG63375.1| protein of unknown function DUF1321 [Chelativorans sp. BNC1]
Length = 177
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 90/180 (50%), Positives = 119/180 (66%), Gaps = 3/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL +EALRG+V+ VL EVA G LPG HHF+I F TNA GVRIS L++ Y
Sbjct: 1 MPEDRIRYDILVQEALRGVVRKVLQEVAQAG-LPGNHHFFIRFVTNAPGVRISSRLKERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ Q+WDLKV + FEV LSFS++PE+L IPF+A++GFYDPS +FE+EF+V
Sbjct: 60 PEEMTIVIQYQYWDLKVTEKGFEVVLSFSDIPEKLEIPFSAVRGFYDPSASFEVEFEVKQ 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E + E + K + + + + +++ + K A V+SLD FRKK
Sbjct: 120 E--QPHAEPAEPTLLKEEAKQPAKRKPAAERKTEGNEAPAEEKAEGKGAEVVSLDAFRKK 177
>gi|254501136|ref|ZP_05113287.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222437207|gb|EEE43886.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 191
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 88/191 (46%), Positives = 121/191 (63%), Gaps = 12/191 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D +RYDIL ++ALRG VK +L+EV G LPG+HHFYI F T A GV+ISQ L++ Y
Sbjct: 1 MSEDLLRYDILIQDALRGAVKKILAEVGRTG-LPGDHHFYIAFETTAPGVKISQRLKERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QFWDL + ++ FEVGLSF VPE+L++PF+AIKGF+DPSV F LEFD
Sbjct: 60 PQEMTIVLQHQFWDLAIGEHAFEVGLSFGGVPEKLLVPFSAIKGFFDPSVQFALEFDPGK 119
Query: 145 EHIEEKLE-----------GGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
E + T + L + DN + ++ +KK ++ +
Sbjct: 120 TAEELPEDLLEAVEELAKAEQETTEKLMTADNKQDDVPAVEAEKKTKKPDQDTEDGDGGG 179
Query: 194 SVISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 EVVSLDAFRKK 190
>gi|218530840|ref|YP_002421656.1| hypothetical protein Mchl_2889 [Methylobacterium chloromethanicum
CM4]
gi|218523143|gb|ACK83728.1| protein of unknown function DUF1321 [Methylobacterium
chloromethanicum CM4]
Length = 217
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 87/217 (40%), Positives = 122/217 (56%), Gaps = 38/217 (17%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFYI+F T A GVR+SQ LR+ Y
Sbjct: 1 MAEDLIRYDLLVQDALRGVVRKVLTDAAREG-LSGEHHFYISFRTEAPGVRMSQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL+IPF+A+ GF+DPSV F L+FD++
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHSFEVGLSFSGVPERLLIPFDALSGFFDPSVQFGLKFDLNE 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQ---------------------------- 176
E+ E + ++ +
Sbjct: 120 GAEGEQSEETQPSAPAKTGPRGAGSEPAEIKPKSTGLATVQNGPKIVPALPASGKAKTDL 179
Query: 177 ---------DSSKKKSTKKQNKNKMASVISLDNFRKK 204
+K ++ +K +++ A V+SLD FRKK
Sbjct: 180 RPDNKPEDGAEAKPEAAEKTDRDGTAEVVSLDAFRKK 216
>gi|188582029|ref|YP_001925474.1| hypothetical protein Mpop_2784 [Methylobacterium populi BJ001]
gi|179345527|gb|ACB80939.1| protein of unknown function DUF1321 [Methylobacterium populi BJ001]
Length = 220
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 91/220 (41%), Positives = 127/220 (57%), Gaps = 41/220 (18%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFYI+F T A GVR+SQ LR+ Y
Sbjct: 1 MAEDLIRYDLLVQDALRGVVRKVLTDAAREG-LSGEHHFYISFRTEAPGVRMSQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL+IPF+A+ GF+DPSV F L+FD++
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHSFEVGLSFSGVPERLLIPFDALSGFFDPSVQFGLKFDLNE 119
Query: 145 EHIEEKLEGGNT----------------------------------GKVLTSPDNFDKNQ 170
E+ E K++ + K +
Sbjct: 120 GAEGEQTEETQPSAPIKPGPRGAASEPAEIKPKGTGLATVQSGQGGPKIVPALPAAGKAK 179
Query: 171 TNSVSQDSS------KKKSTKKQNKNKMASVISLDNFRKK 204
+ S + S K ++ +K +++ A V+SLD FRKK
Sbjct: 180 ADPKSDNKSEDGVEAKPEAAEKTDRDGTAEVVSLDAFRKK 219
>gi|316933221|ref|YP_004108203.1| hypothetical protein Rpdx1_1858 [Rhodopseudomonas palustris DX-1]
gi|315600935|gb|ADU43470.1| hypothetical protein Rpdx1_1858 [Rhodopseudomonas palustris DX-1]
Length = 178
Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats.
Identities = 86/180 (47%), Positives = 121/180 (67%), Gaps = 2/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VL++VA G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDHIRYDVLARDALRGVLRHVLTDVAQHG-LPGEHHFFITFQSRADGVKLSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MT+V+Q+QFWDL V ++ FEVGLSF +PERLV+PF AIK F+DPSV F L+F+
Sbjct: 60 PEEMTVVLQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFAAIKSFFDPSVKFGLQFEAAD 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E I+E E + +++T+ S + ++S + + A V+ LD FRKK
Sbjct: 120 E-IDETGESDDATELVTAAPPPVALPPASATLENSAPSDDEPARSGEGAEVVRLDRFRKK 178
>gi|119390693|pdb|2NYS|A Chain A, X-Ray Crystal Structure Of Protein Agr_c_3712 From
Agrobacterium Tumefaciens. Northeast Structural Genomics
Consortium Target Atr88.
gi|119390694|pdb|2NYS|B Chain B, X-Ray Crystal Structure Of Protein Agr_c_3712 From
Agrobacterium Tumefaciens. Northeast Structural Genomics
Consortium Target Atr88
Length = 176
Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats.
Identities = 96/179 (53%), Positives = 122/179 (68%), Gaps = 13/179 (7%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
DHIRYDILA++ALRG+++ VL EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 2 GQDHIRYDILAQDALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHLKSKYA 61
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
E+ TIVIQ+QFWD KV + FE+GLSFS+ PE+LVIP+NAI+GFYDPSVNFELEFDV +
Sbjct: 62 EQXTIVIQHQFWDXKVTETGFEIGLSFSDTPEKLVIPYNAIRGFYDPSVNFELEFDVPLA 121
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE E T ++ + ++ K + K SV+SLD FRKK
Sbjct: 122 KEEEXEEAEITAYPVSH-------------EAKPASETPKSGEEKKEGSVVSLDAFRKK 167
>gi|304392195|ref|ZP_07374137.1| conserved hypothetical protein [Ahrensia sp. R2A130]
gi|303296424|gb|EFL90782.1| conserved hypothetical protein [Ahrensia sp. R2A130]
Length = 188
Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats.
Identities = 87/189 (46%), Positives = 115/189 (60%), Gaps = 2/189 (1%)
Query: 17 IIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRI 76
+ D D IRYDILA+EALRG+V+ VL E A G LPGEHHFYITF T GVR+
Sbjct: 1 MNDTTDDTEIEDLIRYDILAQEALRGVVRKVLQEAARTG-LPGEHHFYITFDTGHAGVRL 59
Query: 77 SQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNF 136
S +R+ YP++MTIVIQ+QFWDL+ ++ F +GLSF +PE ++IPF A+ GF+DPSV F
Sbjct: 60 SSRMREKYPDEMTIVIQHQFWDLETTEHSFSIGLSFDGIPETMLIPFPAVTGFFDPSVQF 119
Query: 137 ELEFDVHIEHIEEKLEGGNTGKVLTSPDNFD-KNQTNSVSQDSSKKKSTKKQNKNKMASV 195
L+FD +E +E+ N V P + +K T+ + A V
Sbjct: 120 GLQFDADVEDEDEEEGPANPASVSALPSPVRVETDKERAEVKEAKLPETEDDGEAASADV 179
Query: 196 ISLDNFRKK 204
+SLD FRKK
Sbjct: 180 VSLDAFRKK 188
>gi|319405987|emb|CBI79619.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 181
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 85/183 (46%), Positives = 119/183 (65%), Gaps = 5/183 (2%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL EVA G LPG HHF+ITF TNA G++IS L+K Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLEVAKAG-LPGNHHFFITFLTNAPGIKISPRLQKRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QF DL V + FEV LSF + E+LVIPFN+I+ FYDP FE FD+
Sbjct: 60 PDQMTIVLQHQFRDLSVSETAFEVTLSFGEITEKLVIPFNSIQVFYDPIAAFETAFDLPS 119
Query: 145 E---HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNF 201
+ LE + V+ S +N + +S ++K+S + + A+++SLD+F
Sbjct: 120 NLTSGESKNLENASCAPVIPSDKQKKENISTKISTLKTEKES-SNNDSKQSANIVSLDSF 178
Query: 202 RKK 204
RKK
Sbjct: 179 RKK 181
>gi|182677764|ref|YP_001831910.1| hypothetical protein Bind_0771 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633647|gb|ACB94421.1| protein of unknown function DUF1321 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 184
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 82/184 (44%), Positives = 113/184 (61%), Gaps = 5/184 (2%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ G LPGEHHFYITF T+A GVR+S +R+ Y
Sbjct: 1 MAVDLIRYDLLVQDALRGVVRKVLTDAVREG-LPGEHHFYITFRTHAPGVRLSAAMREQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTI++Q+QFWDL V + FEVGLSF VPE L IPF+A+ GF+DPSV F L+F++
Sbjct: 60 PDEMTIILQHQFWDLSVNEQAFEVGLSFKGVPEILRIPFDAVTGFFDPSVRFALKFELED 119
Query: 145 EHIEEKLEGGNTG----KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDN 200
E +E +T P S ++ + + A V+S+D
Sbjct: 120 EAVEAGANDTDTPDQGRPDGAVPLLVASESPAQGSSTAAGSSESSSLPAPEEAKVVSIDA 179
Query: 201 FRKK 204
FRKK
Sbjct: 180 FRKK 183
>gi|240850874|ref|YP_002972274.1| hypothetical protein Bgr_13790 [Bartonella grahamii as4aup]
gi|240267997|gb|ACS51585.1| hypothetical protein Bgr_13790 [Bartonella grahamii as4aup]
Length = 181
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 84/182 (46%), Positives = 111/182 (60%), Gaps = 3/182 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VLSEV+ G LPG HHF+ITF TNA GV+IS L+ Y
Sbjct: 1 MVKDQIRYDILVQDALRGVIRKVLSEVSKAG-LPGNHHFFITFLTNAPGVKISPRLKNRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QF DL V + FEV LSF + E+LVIPF +I+ FYDP FE FD+
Sbjct: 60 PEQMTIVLQHQFRDLSVSETAFEVTLSFREITEKLVIPFTSIQVFYDPVAAFEAAFDLPS 119
Query: 145 EHIEEKLEGGNTGKVLTS--PDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ E + K T + Q+ S K + + + A V+SLD+FR
Sbjct: 120 NLTSGESENSENTSTTPITLSNTQKKENTLTKEQNFSTNKESSNSDTKQSADVVSLDSFR 179
Query: 203 KK 204
KK
Sbjct: 180 KK 181
>gi|319899136|ref|YP_004159229.1| hypothetical protein BARCL_0977 [Bartonella clarridgeiae 73]
gi|319403100|emb|CBI76658.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 181
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 80/182 (43%), Positives = 112/182 (61%), Gaps = 3/182 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL EV G LPG HHF+ITF TNA G++IS L++ Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLEVGKAG-LPGNHHFFITFLTNAPGIKISPRLQERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QF DL V + FEV LSF + ERLVIPFN+I+ FYDP+ FE FD+
Sbjct: 60 PDQMTIVLQHQFRDLSVSETAFEVTLSFGEITERLVIPFNSIQVFYDPTAAFEAAFDLPS 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQ--DSSKKKSTKKQNKNKMASVISLDNFR 202
+ E + + + N ++ + K K + + A ++SLD+FR
Sbjct: 120 NLTSGENESSENTSCTPVIPSNKQKKENVSTKLSNLKKDKEPSNSDSKQSADIVSLDSFR 179
Query: 203 KK 204
KK
Sbjct: 180 KK 181
>gi|163735111|ref|ZP_02142547.1| hypothetical protein RLO149_22845 [Roseobacter litoralis Och 149]
gi|161391569|gb|EDQ15902.1| hypothetical protein RLO149_22845 [Roseobacter litoralis Och 149]
Length = 175
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 68/203 (33%), Positives = 100/203 (49%), Gaps = 28/203 (13%)
Query: 1 MVSLWNFFSSRWQWFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGE 60
M++ FF+SR + I Y L EA+RGL++ VL +V G LPGE
Sbjct: 1 MLATEEFFASRNKMTR------------SIDYGNLMHEAMRGLIRKVLLDVCDNG-LPGE 47
Query: 61 HHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLV 120
HHF+ITF T ++ L YP +MT+V+Q+ + +L+V D F V L+F + PE L
Sbjct: 48 HHFFITFDTGHPDAELADWLFDRYPGEMTVVMQHWYDNLEVTDEGFSVTLNFGDAPEPLY 107
Query: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
IP++AIK F DPSV F L F+ + EE + +
Sbjct: 108 IPYDAIKTFVDPSVEFGLRFETQSDEDEE---------------AAPSQLPATSQVEKPD 152
Query: 181 KKSTKKQNKNKMASVISLDNFRK 203
+ + + K A ++SLD+FRK
Sbjct: 153 TEKAETDDGAKDAEIVSLDSFRK 175
>gi|114706846|ref|ZP_01439746.1| hypothetical protein FP2506_18559 [Fulvimarina pelagi HTCC2506]
gi|114537794|gb|EAU40918.1| hypothetical protein FP2506_18559 [Fulvimarina pelagi HTCC2506]
Length = 190
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 93/190 (48%), Positives = 126/190 (66%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D IRYD+LA++ALRG+++ VL EVA G LPGEHHF+ITF T+A GVRIS LR+ Y
Sbjct: 1 MSQDLIRYDVLAQDALRGVIRKVLGEVAKTG-LPGEHHFFITFLTSAPGVRISSRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+Q+WDL V +N FE+GLSFS++PE+L++PF+A++GFYDPSVNFELEFDV
Sbjct: 60 PDLMTIVVQHQYWDLSVTENSFEIGLSFSDIPEKLLVPFSAVRGFYDPSVNFELEFDVRG 119
Query: 145 EHIEEKLEGGNT----------GKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMAS 194
E T G + +P + S S + + + + + A
Sbjct: 120 AEAANSDEAEETVSADDAKPSGGALSATPLPVREKAEASASSSADSENDDESEEERPDAQ 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|146342424|ref|YP_001207472.1| hypothetical protein BRADO5583 [Bradyrhizobium sp. ORS278]
gi|146195230|emb|CAL79255.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 188
Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 80/189 (42%), Positives = 116/189 (61%), Gaps = 10/189 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VL++ A+ G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDHIRYDVLARDALRGVLRRVLTDAATHG-LPGEHHFFITFVSKAEGVKLSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTI++Q+QFWDL V ++ FEVGLSF +PERLV+PF+AIK F+DPSV F L+F+
Sbjct: 60 PDEMTIILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFHAIKSFFDPSVQFGLQFEPSE 119
Query: 145 EHIE---------EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASV 195
E + + TS ++ + + + + + A V
Sbjct: 120 AIAETPAAPKLPAAPMPSAVPAILPTSAAKTSDQTSDKAGDNLADDEPAPPPSSGEGAEV 179
Query: 196 ISLDNFRKK 204
+ LD FRKK
Sbjct: 180 VRLDRFRKK 188
>gi|240139410|ref|YP_002963885.1| hypothetical protein MexAM1_META1p2855 [Methylobacterium extorquens
AM1]
gi|240009382|gb|ACS40608.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 217
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 88/217 (40%), Positives = 120/217 (55%), Gaps = 38/217 (17%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFYI+F T A GVR+SQ LR+ Y
Sbjct: 1 MAEDLIRYDLLVQDALRGVVRKVLTDAAREG-LSGEHHFYISFRTEAPGVRMSQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV-- 142
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL+IPF+A+ GF+DPSV F L+FD+
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHSFEVGLSFSGVPERLLIPFDALSGFFDPSVQFGLKFDLNE 119
Query: 143 -----------HIEHIEEKLEGGNTGKVLTSPDNFD------------------------ 167
+ G + P +
Sbjct: 120 GAEGEQAEETQPSAPAKAGPRGAGSEPAEIKPKSTGLATVQNGPKIVPALPASGKAKTDL 179
Query: 168 KNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
K +K ++ +K +++ A V+SLD FRKK
Sbjct: 180 KPDNKPEDGAEAKPEAAEKTDRDGTAEVVSLDAFRKK 216
>gi|163852082|ref|YP_001640125.1| hypothetical protein Mext_2662 [Methylobacterium extorquens PA1]
gi|163663687|gb|ABY31054.1| protein of unknown function DUF1321 [Methylobacterium extorquens
PA1]
Length = 217
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 88/217 (40%), Positives = 123/217 (56%), Gaps = 38/217 (17%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFYI+F T A GVR+SQ LR+ Y
Sbjct: 1 MAEDLIRYDLLVQDALRGVVRKVLTDAAREG-LSGEHHFYISFRTEAPGVRMSQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL+IPF+A+ GF+DPSV F L+FD++
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHSFEVGLSFSGVPERLLIPFDALSGFFDPSVQFGLKFDLNE 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSS------------------------- 179
E+ E + ++ + S+
Sbjct: 120 GAEGEQAEETQPSAPAKAGPRGAGSEPAEIKPKSTGLATVQNGPKIVPALPASGKAKTDL 179
Query: 180 ------------KKKSTKKQNKNKMASVISLDNFRKK 204
K ++ +K +++ A V+SLD FRKK
Sbjct: 180 KPDNKLDDGSEAKPEAAEKTDRDGTAEVVSLDAFRKK 216
>gi|27381629|ref|NP_773158.1| hypothetical protein blr6518 [Bradyrhizobium japonicum USDA 110]
gi|27354797|dbj|BAC51783.1| blr6518 [Bradyrhizobium japonicum USDA 110]
Length = 172
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 87/182 (47%), Positives = 114/182 (62%), Gaps = 12/182 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VL++ AS G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDHIRYDVLARDALRGVLRKVLTDAASHG-LPGEHHFFITFVSKAEGVKLSSRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTI++Q+QFWDL VL++ FEVGLSF +PERLV+PF+AIK F DPSV F L+FD
Sbjct: 60 PEEMTIILQHQFWDLTVLEDRFEVGLSFGGIPERLVVPFSAIKSFLDPSVKFGLQFDTSD 119
Query: 145 --EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
E E L L+ P + D ++ A V+ LD FR
Sbjct: 120 VAEVAPETLPAAPAPSALSVPTP---------ATDKAETAEEPTPPSQGGAEVVRLDRFR 170
Query: 203 KK 204
KK
Sbjct: 171 KK 172
>gi|115524158|ref|YP_781069.1| hypothetical protein RPE_2145 [Rhodopseudomonas palustris BisA53]
gi|115518105|gb|ABJ06089.1| protein of unknown function DUF1321 [Rhodopseudomonas palustris
BisA53]
Length = 169
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 80/180 (44%), Positives = 113/180 (62%), Gaps = 11/180 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VL++ A G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDHIRYDVLARDALRGVLRRVLTDAAEHG-LPGEHHFFITFLSRAEGVKMSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P +MT+++Q+QFWDL V ++ FEVGLSF VPERLV+PF+AIK F DPSV F L+F+
Sbjct: 60 PTEMTVILQHQFWDLVVTEDRFEVGLSFGGVPERLVVPFSAIKSFLDPSVEFGLQFEPDA 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E+ T + +Q + + + + ++ A V+ LD FRKK
Sbjct: 120 PADEQAANEAETPDGVGIGS----------AQAGTGEPTDEPTKPSEGAEVVRLDRFRKK 169
>gi|254561826|ref|YP_003068921.1| hypothetical protein METDI3421 [Methylobacterium extorquens DM4]
gi|254269104|emb|CAX25067.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 217
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 89/217 (41%), Positives = 123/217 (56%), Gaps = 38/217 (17%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFYI+F T A GVR+SQ LR+ Y
Sbjct: 1 MAEDLIRYDLLVQDALRGVVRKVLTDAAREG-LSGEHHFYISFRTEAPGVRMSQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL+IPF+A+ GF+DPSV F L+FD++
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHSFEVGLSFSGVPERLLIPFDALSGFFDPSVQFGLKFDLNE 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSS------------------------- 179
E+ E S ++ + S+
Sbjct: 120 GAEGEQAEETQPSAPAKSGPRGAGSEPAEIKPKSTGLATVQNGPKIVPALPASGKAKTDL 179
Query: 180 ------------KKKSTKKQNKNKMASVISLDNFRKK 204
K ++ +K +++ A V+SLD FRKK
Sbjct: 180 KPDNKPEDGSEAKPEAAEKTDRDGTAEVVSLDAFRKK 216
>gi|260462151|ref|ZP_05810395.1| protein of unknown function DUF1321 [Mesorhizobium opportunistum
WSM2075]
gi|259032011|gb|EEW33278.1| protein of unknown function DUF1321 [Mesorhizobium opportunistum
WSM2075]
Length = 179
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 99/180 (55%), Positives = 121/180 (67%), Gaps = 1/180 (0%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVR+S LR+ Y
Sbjct: 1 MADDHIRYDILAQEALRGVMRKVLAEVARTG-LPGNHHFFITFLTGAPGVRVSSRLRERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ Q+WDLKV D FEVGLSFS+VPE+L IPF+A++GFYDPSVNFELEFDV
Sbjct: 60 PEQMTIVIQFQYWDLKVTDTGFEVGLSFSDVPEKLEIPFSAVRGFYDPSVNFELEFDVKT 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E + + + K + + +KK K A V+SLD FRKK
Sbjct: 120 EGAATEELEDQATPEPLTIVSEKKTKAEKKAAAEPEKKPAAGDAAAKGAEVVSLDAFRKK 179
>gi|319404489|emb|CBI78096.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 181
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 82/182 (45%), Positives = 112/182 (61%), Gaps = 3/182 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL EVA G LPG HHF+ITF TNA G++IS L+K Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLEVAKAG-LPGNHHFFITFLTNAPGIKISPRLQKRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QF DL V + FEV LSF + E+LVIPFN+I+ FYDP FE FD+
Sbjct: 60 PDQMTIVLQHQFRDLSVSETAFEVTLSFGEITEKLVIPFNSIQVFYDPIAAFETAFDLPP 119
Query: 145 EHIEEKLEGGNTGKVLT--SPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
I + + T D K ++ + +K + + A ++SLD+FR
Sbjct: 120 SLISGENQNPETASCSPFTPSDKQKKENISTKISNLKTEKEPSNNDSKQSADIVSLDSFR 179
Query: 203 KK 204
KK
Sbjct: 180 KK 181
>gi|328542988|ref|YP_004303097.1| hypothetical protein SL003B_1369 [polymorphum gilvum SL003B-26A1]
gi|326412734|gb|ADZ69797.1| hypothetical protein SL003B_1369 [Polymorphum gilvum SL003B-26A1]
Length = 202
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 85/202 (42%), Positives = 114/202 (56%), Gaps = 23/202 (11%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D +RYDIL ++ALRG VK +L+EVA G LPG+HHFYI F T A GVRIS +R+ Y
Sbjct: 1 MAEDLLRYDILVQDALRGAVKKILAEVARTG-LPGDHHFYIAFDTTAPGVRISSRIRERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P +MTIV+Q+QFWDL + ++ FEVGLSF VPE+L+IPF+AIKGF+DPSV F LEF+
Sbjct: 60 PSEMTIVLQHQFWDLAIGEHAFEVGLSFGGVPEKLLIPFSAIKGFFDPSVQFALEFEPGK 119
Query: 145 EHIEEKL----------------------EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
E + +P ++ + + + +K
Sbjct: 120 TAEELPEDLLEAVGELADVEASAARDLVRDADKAPAANKTPRKSKRDAAPTKADVAKGEK 179
Query: 183 STKKQNKNKMASVISLDNFRKK 204
+ V+SLD FRKK
Sbjct: 180 EATPKASEAGGEVVSLDAFRKK 201
>gi|163868695|ref|YP_001609907.1| hypothetical protein Btr_1573 [Bartonella tribocorum CIP 105476]
gi|161018354|emb|CAK01912.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 181
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 85/182 (46%), Positives = 112/182 (61%), Gaps = 3/182 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VLSEVA G LPG HHF+ITF TNA GV+IS L+ Y
Sbjct: 1 MITDQIRYDILVQDALRGVIRKVLSEVAKAG-LPGNHHFFITFFTNAPGVKISPRLKNRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QF DL V + FEV LSF + E+LVIPF +I+ FYDP FE FD+
Sbjct: 60 PEQMTIVLQHQFRDLSVSETAFEVTLSFREITEKLVIPFTSIQVFYDPVAAFEAAFDLPS 119
Query: 145 EHIEEKLEGGNTGKVLTSP--DNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ + E + + T + Q+ S KK + + A V+SLD+FR
Sbjct: 120 KLPSGESEDAENTPSTPIALSNQQKQENTPTKEQNLSTKKEPLNNDTKQSADVVSLDSFR 179
Query: 203 KK 204
KK
Sbjct: 180 KK 181
>gi|218671608|ref|ZP_03521278.1| hypothetical protein RetlG_08073 [Rhizobium etli GR56]
Length = 161
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 94/158 (59%), Positives = 118/158 (74%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVATTGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
EE G T + + D+ + KK
Sbjct: 121 ADGEELPSGEITAYPVDAAGKPDETAGAKPADGEEKKP 158
>gi|319407481|emb|CBI81131.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 181
Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats.
Identities = 81/182 (44%), Positives = 111/182 (60%), Gaps = 3/182 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL EVA G LPG HHF+ITF TNA G++IS L+K Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLEVAKAG-LPGNHHFFITFLTNAPGIKISPRLQKRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QF DL V + FEV LSF + E+LVIPFN+I+ FYDP FE FD+
Sbjct: 60 PDQMTIVLQHQFRDLSVSETAFEVTLSFGEITEKLVIPFNSIQVFYDPIAAFETAFDLPP 119
Query: 145 EHIEEKLEGGNTGKVLT--SPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ + T D K ++ + +K + + A ++SLD+FR
Sbjct: 120 TLTSGESQNLETASCSPFIPSDKQKKESISTKISNLKTEKEPSNNDSKQSADIVSLDSFR 179
Query: 203 KK 204
KK
Sbjct: 180 KK 181
>gi|192292379|ref|YP_001992984.1| hypothetical protein Rpal_4013 [Rhodopseudomonas palustris TIE-1]
gi|192286128|gb|ACF02509.1| protein of unknown function DUF1321 [Rhodopseudomonas palustris
TIE-1]
Length = 178
Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats.
Identities = 86/180 (47%), Positives = 121/180 (67%), Gaps = 2/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VL++VA G LPGEHHF+ITF + GV++S L Y
Sbjct: 1 MAIDHIRYDVLARDALRGVLRHVLTDVAQHG-LPGEHHFFITFQSKGDGVKLSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MT+V+Q+QFWDL V ++ FEVGLSF +PERLV+PF +IK F+DPSV F L+F+
Sbjct: 60 PEEMTVVLQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFASIKSFFDPSVKFGLQFEAAD 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E ++E E + +++T+ T+S + DSS + A V+ LD FRKK
Sbjct: 120 E-VDETGEADDGTELVTAAPAPVALSTSSATTDSSAPSDDDAPRSGEGAEVVRLDRFRKK 178
>gi|154245365|ref|YP_001416323.1| hypothetical protein Xaut_1418 [Xanthobacter autotrophicus Py2]
gi|154159450|gb|ABS66666.1| protein of unknown function DUF1321 [Xanthobacter autotrophicus
Py2]
Length = 198
Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats.
Identities = 85/198 (42%), Positives = 115/198 (58%), Gaps = 19/198 (9%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ DHIRYD+LA+EALR +V+ VL +VA G LPGEHHFYI+F T A GVR+SQ + + Y
Sbjct: 1 MSVDHIRYDLLAQEALRSVVRRVLLDVAKTG-LPGEHHFYISFDTRAPGVRLSQRMLEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWDL V D FEVGLSF +PERL++PF+A+KGF+DPSV F L+F++
Sbjct: 60 PEEMTIVLQHQFWDLIVTDTTFEVGLSFGGIPERLLVPFSALKGFFDPSVKFGLQFELAA 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKS------------------TKK 186
E + + + S + + + S
Sbjct: 120 NESEAEESDDSPFEAPRSANAPAPLRPARGAASEPVLASAVPTAASEAGATGQNTGQEAG 179
Query: 187 QNKNKMASVISLDNFRKK 204
+ A V+ LD FR K
Sbjct: 180 ERPASGAQVVQLDVFRNK 197
>gi|49474439|ref|YP_032481.1| hypothetical protein BQ08680 [Bartonella quintana str. Toulouse]
gi|49239943|emb|CAF26347.1| hypothetical protein BQ08680 [Bartonella quintana str. Toulouse]
Length = 181
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 86/182 (47%), Positives = 111/182 (60%), Gaps = 3/182 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL EVA G LPG HHF+ITF TNA G++IS L+ Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLEVAKAG-LPGNHHFFITFLTNAPGIKISTRLKSRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QF DL V + FEV LSF + E+LVIPFNAI+ FYDP FE FD+
Sbjct: 60 PEQMTIVLQHQFRDLSVSEIAFEVTLSFKEIAEKLVIPFNAIQVFYDPVAAFEAAFDLPS 119
Query: 145 EHIEEKLEG--GNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
K E + D K + Q+S K + + + A V+SLD+FR
Sbjct: 120 NPTSGKDENLENTAPASVMLSDKQKKANIFTKEQNSKANKESSNNDSKQSADVVSLDSFR 179
Query: 203 KK 204
KK
Sbjct: 180 KK 181
>gi|49475837|ref|YP_033878.1| hypothetical protein BH11040 [Bartonella henselae str. Houston-1]
gi|49238645|emb|CAF27889.1| hypothetical protein BH11040 [Bartonella henselae str. Houston-1]
Length = 181
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 86/182 (47%), Positives = 112/182 (61%), Gaps = 3/182 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VLSEVA G LPG HHF+ITF TNA GV+IS L+ Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLSEVAKAG-LPGSHHFFITFLTNAPGVKISTRLKSRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QF DL V + FEV LSF V E+LVIPF++I+ FYDP FE FD+
Sbjct: 60 PEQMTIVLQHQFRDLNVSETAFEVTLSFREVSEKLVIPFHSIQVFYDPVAAFEAAFDLPS 119
Query: 145 EHIEEKLEG--GNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
++ E + D K + Q S K + + + A V+SLD+FR
Sbjct: 120 NLNSKEGENLENIASTPVILSDTQKKEKKFPKEQISKTNKDSSNNDTKQSADVVSLDSFR 179
Query: 203 KK 204
KK
Sbjct: 180 KK 181
>gi|319408807|emb|CBI82464.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 182
Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats.
Identities = 78/181 (43%), Positives = 108/181 (59%), Gaps = 3/181 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL EVA G LPG HHF+ITF+T A V+IS L+ Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLEVAKAG-LPGNHHFFITFSTKAPAVKISSRLKSRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QF DL V + FEV LSF + E+L+IPF +I+ FYDP FE FD+
Sbjct: 60 PDQMTIVLQHQFRDLNVSETAFEVTLSFGEITEKLIIPFASIQVFYDPVAAFEAAFDLPA 119
Query: 145 EHIEEKLEGGNTGKVLT--SPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
E+ E + S + +Q+ + K + + A V+SLD+FR
Sbjct: 120 NLTSEENENPESAPHTPDISLNKQKTENELIKTQNPKRDKEPSNNDTKQSADVVSLDSFR 179
Query: 203 K 203
K
Sbjct: 180 K 180
>gi|90424761|ref|YP_533131.1| hypothetical protein RPC_3270 [Rhodopseudomonas palustris BisB18]
gi|90106775|gb|ABD88812.1| protein of unknown function DUF1321 [Rhodopseudomonas palustris
BisB18]
Length = 172
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 78/180 (43%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+LA++ALRG+++ VL++ A G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDLIRYDVLARDALRGVLRQVLTDAAEHG-LPGEHHFFITFLSTAEGVKLSPRLLVQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MT+++Q+QFWDL V ++ FEVGLSF +PERLV+PF +IK F+DPSV F L+F+ +
Sbjct: 60 PQEMTVILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFASIKSFFDPSVEFGLQFEPSL 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E V SP + ++ + ++ ++ A V+ LD FRKK
Sbjct: 120 PG-EVPAANQPAASVPASPAVPRDDAP------AASETPAEQPKPSEGAEVVRLDRFRKK 172
>gi|299131896|ref|ZP_07025091.1| protein of unknown function DUF1321 [Afipia sp. 1NLS2]
gi|298592033|gb|EFI52233.1| protein of unknown function DUF1321 [Afipia sp. 1NLS2]
Length = 174
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 78/180 (43%), Positives = 109/180 (60%), Gaps = 6/180 (3%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+++ VLS+ A G LPG+HHFYITF + A GV++S L Y
Sbjct: 1 MATDLIRYDVLTRDALRGVLRRVLSDAAESG-LPGDHHFYITFLSTAEGVKLSPRLLSQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MT+++Q+QFWDL V ++HFEVGLSF +PERLV+PF+AI F+DPSV F L+F+
Sbjct: 60 PQEMTVILQHQFWDLVVTEDHFEVGLSFGGIPERLVVPFSAITRFFDPSVQFGLQFETAE 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
I + + P + D + + A V+ LD FRKK
Sbjct: 120 AAIGDAEPAAAEVEKADPPASPDSPDNPDDDGGG-----GGGDHPREGAQVVRLDRFRKK 174
>gi|220920731|ref|YP_002496032.1| hypothetical protein Mnod_0697 [Methylobacterium nodulans ORS 2060]
gi|219945337|gb|ACL55729.1| protein of unknown function DUF1321 [Methylobacterium nodulans ORS
2060]
Length = 211
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 85/211 (40%), Positives = 114/211 (54%), Gaps = 32/211 (15%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALR +V+ VL + A G L GEHHFY++F T+ GVRISQ LR+ Y
Sbjct: 1 MADDLIRYDLLVQDALRSVVRKVLGDAAREG-LAGEHHFYVSFRTDYPGVRISQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL++PF A+ GF+DPSV F L+F++
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHAFEVGLSFSGVPERLLVPFEAVTGFFDPSVQFGLKFELGD 119
Query: 145 EHIEEKLE-----------GGNTGKVLTSPDNFDKNQTNSVSQ----------------- 176
++ G + +P V
Sbjct: 120 GQAGDEAATPTGAGLRAIRGAGSEPSEAAPKVPALAGVPKVVPGADKAEAKPAAKDAAKD 179
Query: 177 ---DSSKKKSTKKQNKNKMASVISLDNFRKK 204
SK + + ASV+SLD FRKK
Sbjct: 180 AAKTPSKPAAEEPAASESGASVVSLDAFRKK 210
>gi|148257353|ref|YP_001241938.1| hypothetical protein BBta_6105 [Bradyrhizobium sp. BTAi1]
gi|146409526|gb|ABQ38032.1| hypothetical protein BBta_6105 [Bradyrhizobium sp. BTAi1]
Length = 175
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 83/180 (46%), Positives = 116/180 (64%), Gaps = 5/180 (2%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VLS+ A+ G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDHIRYDVLARDALRGVLRRVLSDAAAHG-LPGEHHFFITFVSKAEGVKLSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTI++Q+QFWDL V ++ FEVGLSF +PERLV+PF+AIK F+DPSV F L+F+
Sbjct: 60 PEEMTIILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFHAIKSFFDPSVQFGLQFEPS- 118
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E E + K+ +P + ++ + + A V+ LD FRKK
Sbjct: 119 ---EAIAETPASPKLPAAPAPAALAPAPVAAASAADDQPEPPAPSGEGAEVVRLDRFRKK 175
>gi|209884415|ref|YP_002288272.1| hypothetical protein OCAR_5275 [Oligotropha carboxidovorans OM5]
gi|209872611|gb|ACI92407.1| protein of unknown function [Oligotropha carboxidovorans OM5]
Length = 169
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 82/180 (45%), Positives = 110/180 (61%), Gaps = 11/180 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+++ VL++ A G LPGEHHFYITF +NA GVRIS L Y
Sbjct: 1 MATDLIRYDVLTRDALRGVLRRVLTDAAEHG-LPGEHHFYITFLSNADGVRISPRLLSQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTI++Q+QFWDL V ++ FEVGLSF +PERLV+PFNAI F+DP+V F L+F+
Sbjct: 60 PQEMTIILQHQFWDLVVREDEFEVGLSFGGIPERLVVPFNAITRFFDPAVQFGLQFETAE 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E + + L P +N + + A V+ LD FRKK
Sbjct: 120 MAGEIEPATIEEAEKLAIPAETTENPDDDGDD----------HPHDGGAQVVRLDRFRKK 169
>gi|254470422|ref|ZP_05083826.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211960733|gb|EEA95929.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 202
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 86/202 (42%), Positives = 117/202 (57%), Gaps = 23/202 (11%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDI+ ++ALR V+ +L EV G LPGEHHFYI F T A GV+IS L++ Y
Sbjct: 1 MAEDLIRYDIIIQDALRSAVRKILVEVNRAG-LPGEHHFYIAFETTAPGVKISSRLKERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QFWDL++ ++ FEVGLSF VPE L +PF+AIKGF+DPSV F LEF+
Sbjct: 60 PKEMTIVLQHQFWDLQITEHAFEVGLSFGGVPEHLYVPFSAIKGFFDPSVQFALEFEPGK 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNF---------------------DKNQTNSVSQDSSKKKS 183
E E + L S + F ++ +D K ++
Sbjct: 120 TGEELPAEFRIAERDLDSVEEFHARLETAVEQAEEEEAKTASTAEDTAGDAEEDKEKSEA 179
Query: 184 TK-KQNKNKMASVISLDNFRKK 204
+ ++ A V+SLD FRKK
Sbjct: 180 DETSSEESGSAQVVSLDAFRKK 201
>gi|296446562|ref|ZP_06888504.1| protein of unknown function DUF1321 [Methylosinus trichosporium
OB3b]
gi|296255916|gb|EFH03001.1| protein of unknown function DUF1321 [Methylosinus trichosporium
OB3b]
Length = 177
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 67/180 (37%), Positives = 102/180 (56%), Gaps = 4/180 (2%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D IRYD+L ++ALRG+++ VL++ A G LPG+HHF I+F T A GV+IS L + +
Sbjct: 1 MSTDLIRYDLLLQDALRGVMRKVLADAALAGRLPGDHHFTISFRTRAPGVKISSRLAEQW 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P +MTI++Q+Q+ +L V + F V LSF ++PE+L +PF A+ F DPSV F L+++V
Sbjct: 61 PHEMTIILQHQYSNLVVDERGFSVCLSFRSIPEQLYVPFEAVTVFSDPSVEFGLKWEVE- 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E P + +K + A ++S+D FRKK
Sbjct: 120 ---EASSSAPRDETPAPFPTRPPGVAAVPSAPKPAKAAERAAPEGEEEAKIVSIDAFRKK 176
>gi|86749154|ref|YP_485650.1| hypothetical protein RPB_2031 [Rhodopseudomonas palustris HaA2]
gi|86572182|gb|ABD06739.1| Protein of unknown function DUF1321 [Rhodopseudomonas palustris
HaA2]
Length = 174
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 80/180 (44%), Positives = 114/180 (63%), Gaps = 6/180 (3%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA+EALRG+++ VL++VA G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDHIRYDVLAREALRGVLRQVLTDVAQHG-LPGEHHFFITFLSKADGVKLSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MT+++Q+QFWDL V ++ FEVGLSF +PERLV+PF++IK F+DPSV F L+F+
Sbjct: 60 PEEMTVILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFSSIKSFFDPSVQFGLQFEAGD 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E + ++ ++ + K++ A V+ LD FRKK
Sbjct: 120 GAAEAADTDAPEIAPPAPSPALPAAADSGPAEIAADEAV-----KSEGAEVVRLDRFRKK 174
>gi|312115719|ref|YP_004013315.1| hypothetical protein Rvan_3012 [Rhodomicrobium vannielii ATCC
17100]
gi|311220848|gb|ADP72216.1| hypothetical protein Rvan_3012 [Rhodomicrobium vannielii ATCC
17100]
Length = 184
Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 6/185 (3%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D I YD L EALRG+V+ VL V G +PG+HHFYITF T + GV +S+ L+ Y
Sbjct: 1 MPEDTIPYDDLVLEALRGVVRSVLLRVLKRG-IPGDHHFYITFDTRSPGVGLSKRLKDQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P +MTIV+Q+QFWDL V ++ FEV LSF+N+PERLVIPF+A++ F DPSV+F L
Sbjct: 60 PTEMTIVLQHQFWDLAVTEDRFEVRLSFNNIPERLVIPFSAVRIFQDPSVHFALGLRASE 119
Query: 145 EHIEEKLEG-----GNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
+ + EG + N ++ ++++ + + K A V+SLD
Sbjct: 120 GELAKADEGLSLVPSPLAEQEVQAIPHHDNSQPEIAIEATEDEDDAAEKHRKTAEVVSLD 179
Query: 200 NFRKK 204
FRKK
Sbjct: 180 KFRKK 184
>gi|225627856|ref|ZP_03785893.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617861|gb|EEH14906.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 162
Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 83/158 (52%), Positives = 107/158 (67%), Gaps = 1/158 (0%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
+ GN + + +++
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKADKPKAKTRKPRRREE 157
>gi|121602746|ref|YP_989211.1| hypothetical protein BARBAKC583_0930 [Bartonella bacilliformis
KC583]
gi|120614923|gb|ABM45524.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 177
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 79/180 (43%), Positives = 107/180 (59%), Gaps = 3/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL E + G L G HHF+ITF TNA V+IS L+ Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLETSQAGPL-GNHHFFITFLTNAPEVQISDRLKNRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QF DL V + FEV L F +PE+LVIPF++I+ FYDP FE FD+
Sbjct: 60 PDQMTIVLQHQFKDLSVSETSFEVTLFFEEIPEKLVIPFSSIQVFYDPVAAFEAAFDLPS 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
I + E N+ L +P Q K + + A ++SLD+FRKK
Sbjct: 120 NLISGESE--NSENALHTPTTLSNEQKEENLFTKKIDKDPSNSDTKQSADIVSLDSFRKK 177
>gi|170739400|ref|YP_001768055.1| hypothetical protein M446_1093 [Methylobacterium sp. 4-46]
gi|168193674|gb|ACA15621.1| protein of unknown function DUF1321 [Methylobacterium sp. 4-46]
Length = 208
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 82/208 (39%), Positives = 113/208 (54%), Gaps = 29/208 (13%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALR +V+ VL + A G L GEHHFY++F T+ GVRISQ LR+ Y
Sbjct: 1 MADDLIRYDLLVQDALRSVVRKVLGDAARDG-LAGEHHFYVSFRTDYPGVRISQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+QFWDL V ++ FEVGLSFS +PERL++PF A+ GF+DPSV F L+F++
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHAFEVGLSFSGIPERLLVPFEAVTGFFDPSVQFGLKFELGE 119
Query: 145 EHIEEK--------------LEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKST------ 184
E+ + G + +P + +
Sbjct: 120 GQAGEESAAPAASPGASLRAIRGAGSEPSEAAPKVPALAAAPKMLGADKPEAKPAGKEAA 179
Query: 185 --------KKQNKNKMASVISLDNFRKK 204
+ ASV+SLD FRKK
Sbjct: 180 KAPAKPAEEPAAPEGGASVVSLDAFRKK 207
>gi|99081291|ref|YP_613445.1| hypothetical protein TM1040_1450 [Ruegeria sp. TM1040]
gi|99037571|gb|ABF64183.1| protein of unknown function DUF1321 [Ruegeria sp. TM1040]
Length = 159
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 66/175 (37%), Positives = 90/175 (51%), Gaps = 19/175 (10%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I Y L A+RGL++ VL +VA G LPG HHF+ITF T+ ++ L YP +M
Sbjct: 4 QIDYGNLMHRAMRGLIRNVLDDVAEHG-LPGAHHFFITFDTSHPDAELADWLSDRYPGEM 62
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
T+V+Q+ F +L V D F V L+F + PE L IP++AIK F DPSV F L F+ E +
Sbjct: 63 TVVMQHWFDNLNVTDEGFSVTLNFGDAPEPLYIPYDAIKTFVDPSVEFGLRFESANEDDD 122
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E + V+ D + K A V+SLD+FRK
Sbjct: 123 EDM------------------PPIEVASDMQDVEEDDAPAAKKDADVVSLDSFRK 159
>gi|154252888|ref|YP_001413712.1| hypothetical protein Plav_2446 [Parvibaculum lavamentivorans DS-1]
gi|154156838|gb|ABS64055.1| protein of unknown function DUF1321 [Parvibaculum lavamentivorans
DS-1]
Length = 160
Score = 224 bits (570), Expect = 8e-57, Method: Composition-based stats.
Identities = 78/180 (43%), Positives = 113/180 (62%), Gaps = 20/180 (11%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D +RYD+LA++ALRG+V+ L ++A LPGEHHFYI+F T+A GV +S+ LRK Y
Sbjct: 1 MAEDQMRYDMLAQDALRGVVRRAL-KIARDEGLPGEHHFYISFRTDAPGVEVSEKLRKQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE++TIV+Q+QFW+L+V + F V L+F+ +PERLV+PF A++GF+DPSV F L+F V
Sbjct: 60 PEEITIVLQHQFWNLEVNEERFSVDLTFNKIPERLVVPFAAVQGFFDPSVQFGLQFQVQ- 118
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+++ N K+ ++SK + V+SLD FRKK
Sbjct: 119 --------------GVSAGTNVAKDNATGGVTEASKPEEPAPAA----GDVVSLDAFRKK 160
>gi|217976786|ref|YP_002360933.1| protein of unknown function DUF1321 [Methylocella silvestris BL2]
gi|217502162|gb|ACK49571.1| protein of unknown function DUF1321 [Methylocella silvestris BL2]
Length = 180
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 79/180 (43%), Positives = 113/180 (62%), Gaps = 1/180 (0%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL +EALRG+V+ VL+++A G L GEHHFYITF TN RGVR+S +R+ Y
Sbjct: 1 MAADLIRYDILVQEALRGVVRKVLADMAREG-LVGEHHFYITFRTNGRGVRLSARMRELY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTI++Q+QFWDL V ++ FEVGLSF NVPE L++PF+A+ F DP+ F+LEF +
Sbjct: 60 PEEMTIILQHQFWDLSVSEHAFEVGLSFKNVPEMLLVPFDAVTRFSDPAAGFDLEFKLDE 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ G+ + + + + ++ +K ++S+D FRKK
Sbjct: 120 AVETSANDAGSPVEGDAPALSLPEKASLQGAESDAKVIKEMNVTSAGEDKIVSIDKFRKK 179
>gi|254438302|ref|ZP_05051796.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
gi|198253748|gb|EDY78062.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
Length = 156
Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats.
Identities = 67/175 (38%), Positives = 89/175 (50%), Gaps = 25/175 (14%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I Y L +A+RGL+ VL++V + G LPG HHF+ITF T GV I+ L YP +M
Sbjct: 7 KIDYGNLMHKAMRGLILEVLTDVCAKG-LPGNHHFFITFDTMHPGVEIADWLSDRYPGEM 65
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIVIQ+Q+ L+V D F + LSF + PE L +P++AIK F DPSV F L F+ E +
Sbjct: 66 TIVIQHQYESLRVTDQGFSITLSFGDKPEPLYVPYDAIKTFVDPSVEFGLRFEAQDEDGD 125
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ +K K A V+SLD FRK
Sbjct: 126 APEAPMDV------------------------MAEPEKDAPKKDADVVSLDQFRK 156
>gi|288958773|ref|YP_003449114.1| hypothetical protein AZL_019320 [Azospirillum sp. B510]
gi|288911081|dbj|BAI72570.1| hypothetical protein AZL_019320 [Azospirillum sp. B510]
Length = 165
Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats.
Identities = 78/180 (43%), Positives = 105/180 (58%), Gaps = 15/180 (8%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M + +RYD + + ALRG+V+ L+EVA G LPG HHFY+TF T GV I L Y
Sbjct: 1 MPKEQLRYDRMVETALRGVVRDALTEVAERG-LPGNHHFYLTFRTGYPGVDIPDYLAGQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P +MTIV+Q Q++ L V D+HFEV LSF+NV ERLVIPF AI F DPSVNF L+F
Sbjct: 60 PNEMTIVLQFQYYGLDVTDDHFEVTLSFNNVHERLVIPFGAITTFADPSVNFALQF---- 115
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ L + +V T P + ++++ + K+ V++LD FRKK
Sbjct: 116 ----QPLAATESAEVATMPPRAAAERVEEKVEEAAPAEEPKR------GEVVALDAFRKK 165
>gi|259416532|ref|ZP_05740452.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259347971|gb|EEW59748.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 160
Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats.
Identities = 66/175 (37%), Positives = 89/175 (50%), Gaps = 18/175 (10%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I Y L A+RGL++ VL +VA+ G LPG HHF+ITF T+ ++ L YP +M
Sbjct: 4 QIDYGNLMHRAMRGLIRNVLDDVAANG-LPGAHHFFITFDTSHPDAELADWLSDRYPGEM 62
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
T+V+Q+ F +L V D F V L+F + PE L IP++AIK F DPSV F L F+ E +
Sbjct: 63 TVVMQHWFDNLNVTDEGFSVTLNFGDAPEPLYIPYDAIKTFVDPSVEFGLRFESTGEDDD 122
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E D S + K A V+SLD+FRK
Sbjct: 123 E-----------------DLAPVEVASDLPDDEDEDDAPAAKKDADVVSLDSFRK 160
>gi|114570591|ref|YP_757271.1| hypothetical protein Mmar10_2041 [Maricaulis maris MCS10]
gi|114341053|gb|ABI66333.1| protein of unknown function DUF1321 [Maricaulis maris MCS10]
Length = 165
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 74/180 (41%), Positives = 101/180 (56%), Gaps = 15/180 (8%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D +RYD++A++ALRG+V+ L + + LPG HHFYITF T A GV I L + Y
Sbjct: 1 MAKDLMRYDLMAQDALRGVVRQALLKAGAPEGLPGPHHFYITFRTTAPGVDIDPTLLEKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+++QFWDL V + FEV L FS VP+ L +P++AI F+DPSV F L+F+
Sbjct: 61 PEEMTIVLEHQFWDLNVTETGFEVTLKFSGVPKYLKMPYSAISRFHDPSVGFHLQFEHDG 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E F + + S S + A V+SLD+FRKK
Sbjct: 121 AEDEA---------------GFPDDDPKPKKGNKSGSGSASSGDGGDGAQVVSLDSFRKK 165
>gi|83310429|ref|YP_420693.1| hypothetical protein amb1330 [Magnetospirillum magneticum AMB-1]
gi|82945270|dbj|BAE50134.1| Uncharacterized protein [Magnetospirillum magneticum AMB-1]
Length = 167
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 73/177 (41%), Positives = 102/177 (57%), Gaps = 11/177 (6%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
+ +RYD + +EALRG+V+ L A G LPGEHHFYITF + V +S +L+ +P++
Sbjct: 2 EELRYDKMVEEALRGVVRDSLHFAAEHG-LPGEHHFYITFRPHHPDVGMSDHLKARHPDE 60
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
MTIV+Q+QFWDL V ++ F V LSFS PE +VIPF+A+ GF DPS F L+F
Sbjct: 61 MTIVLQHQFWDLNVTEDGFSVTLSFSGKPETMVIPFSAVTGFADPSAKFGLQFQA----- 115
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ G + D FD + S+K + Q +V++LD FRKK
Sbjct: 116 ---IPGDDDDDDDMEIDEFDPQPPRGAA--SAKDDEPEPQPPGGDGNVVALDKFRKK 167
>gi|84684762|ref|ZP_01012662.1| hypothetical protein 1099457000245_RB2654_02599 [Maritimibacter
alkaliphilus HTCC2654]
gi|84667097|gb|EAQ13567.1| hypothetical protein RB2654_02599 [Rhodobacterales bacterium
HTCC2654]
Length = 168
Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats.
Identities = 66/174 (37%), Positives = 97/174 (55%), Gaps = 14/174 (8%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L +A+R L++ VLS+VA G LPG HHF+ITF T V ++ L +PE MT
Sbjct: 9 IDYGNLMHDAMRSLIRQVLSDVAENG-LPGAHHFFITFDTMHPEVELADWLSDRFPEDMT 67
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ F DL V ++ F V L+F + PER+ IPF+AI+ F DPSV F L F+ + +E
Sbjct: 68 VVMQHWFEDLDVTEDGFAVTLNFGDNPERMYIPFDAIRTFVDPSVEFGLRFETQDDDDDE 127
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + P + ++ K ++ K A V+SLD+FRK
Sbjct: 128 EDGVADIEDAPARPVREAR-------------EADKGKSAPKDAEVVSLDSFRK 168
>gi|315122503|ref|YP_004062992.1| hypothetical protein CKC_03775 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495905|gb|ADR52504.1| hypothetical protein CKC_03775 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 172
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 120/165 (72%), Positives = 136/165 (82%), Gaps = 1/165 (0%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
MN+DHIRYDIL KEALRGLVK VL+E A+IGSLPG+HHFYITFATNARGVRISQN++K Y
Sbjct: 1 MNHDHIRYDILTKEALRGLVKTVLAETAAIGSLPGDHHFYITFATNARGVRISQNIKKIY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PEK+TIVIQNQFWDLKV DNHFEVGLSFSNVPE L IPFNAI+GFYDPSVNFELEFDVH+
Sbjct: 61 PEKITIVIQNQFWDLKVFDNHFEVGLSFSNVPELLSIPFNAIQGFYDPSVNFELEFDVHL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK 189
EE+LE G+VL P+NF+K+Q+ + KKQ K
Sbjct: 121 YDAEEELENKK-GEVLGLPENFNKDQSPDSLEKLPTDNKEKKQKK 164
>gi|159044876|ref|YP_001533670.1| hypothetical protein Dshi_2333 [Dinoroseobacter shibae DFL 12]
gi|157912636|gb|ABV94069.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 175
Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats.
Identities = 67/176 (38%), Positives = 98/176 (55%), Gaps = 3/176 (1%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
+ + Y A+R L++ VL EVA+ G LPGEHHF+ITF T GV +S LR+ YP++
Sbjct: 3 ERLDYGNRMHRAMRALIQDVLREVAADG-LPGEHHFFITFDTQHPGVELSDWLRERYPDE 61
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
MTIV+Q+ F L+V + F V L+F + PE L +P +AI+ F DPSV F L F+ +
Sbjct: 62 MTIVLQHWFDGLEVREADFSVVLNFGDQPEALTVPLDAIRTFVDPSVEFGLRFETQDDAD 121
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E E + + ++K + KK +K A ++SLD+FRK
Sbjct: 122 FEDEED--DEEETHEVTALVPPPEARPHKPTAKDTTEKKPGTSKDAEIVSLDSFRK 175
>gi|254465094|ref|ZP_05078505.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
gi|206686002|gb|EDZ46484.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
Length = 155
Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats.
Identities = 63/175 (36%), Positives = 90/175 (51%), Gaps = 23/175 (13%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I Y L A+RGL++ VL ++A G LPG HHF+ITF T V ++ L YP +M
Sbjct: 4 EIDYGNLMHTAMRGLIRTVLQDIAENG-LPGNHHFFITFDTAHPDVELADWLSDRYPGEM 62
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
T+V+Q+ F +L V D F V L+F + PE L IP++AI+ F DPSV F L F+ E E
Sbjct: 63 TVVMQHWFDNLTVDDEGFAVTLNFGDSPEPLYIPYDAIRTFVDPSVEFGLRFESAEEDSE 122
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + D + + + K A ++SLD+FRK
Sbjct: 123 ----------------------SYAADDDEEQDTARVPAEEKKNADIVSLDSFRK 155
>gi|46202069|ref|ZP_00053809.2| COG3814: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 169
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 68/177 (38%), Positives = 100/177 (56%), Gaps = 9/177 (5%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
+ +RYD + +EALRG+V+ L A G LPGEHHFYITF + V ++ +L+ +P++
Sbjct: 2 EELRYDKMVEEALRGVVRDSLVFAAEHG-LPGEHHFYITFRPHHPDVEMADHLKARHPDE 60
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
MTIV+Q+QFWDL V ++ F V LSFS PE++VIPF+++ GF DPS F L+F
Sbjct: 61 MTIVLQHQFWDLFVTEDGFTVTLSFSGKPEKMVIPFSSVTGFADPSAKFGLQFQA----- 115
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ G + D FD + + + + V++LD FRKK
Sbjct: 116 ---IPGDDEDDDDMEVDAFDPQPPRGSASSTDDEPEPNPPGEGGDGKVVALDKFRKK 169
>gi|254477784|ref|ZP_05091170.1| conserved hypothetical protein [Ruegeria sp. R11]
gi|214032027|gb|EEB72862.1| conserved hypothetical protein [Ruegeria sp. R11]
Length = 158
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 65/175 (37%), Positives = 94/175 (53%), Gaps = 20/175 (11%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I Y L A+RGL++ VL VA G LPG HHF+ITF T+ ++ L YP +M
Sbjct: 4 EIDYGNLMHSAMRGLIRSVLEGVAKDG-LPGNHHFFITFDTSHPDAELADWLSDRYPGEM 62
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
T+V+Q+ F +L V ++ F + L+F + PE L IP++AIK F DPSV F L F+ +
Sbjct: 63 TVVMQHWFDNLNVGEDGFAITLNFGDAPEPLYIPYDAIKTFVDPSVEFGLRFESPDDDD- 121
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ D D + V +D+++KK A V+SLD+FRK
Sbjct: 122 ---------MDDVAEDGLDDDIEIEVQEDTAEKKE---------ADVVSLDSFRK 158
>gi|323136054|ref|ZP_08071137.1| hypothetical protein Met49242DRAFT_0524 [Methylocystis sp. ATCC
49242]
gi|322399145|gb|EFY01664.1| hypothetical protein Met49242DRAFT_0524 [Methylocystis sp. ATCC
49242]
Length = 196
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 75/195 (38%), Positives = 112/195 (57%), Gaps = 15/195 (7%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD++ ++A+RG+++ VLS+VA G LPG+HHF I+F T+A VRIS+ L + +
Sbjct: 1 MAQDLIRYDLVVQDAMRGVMRKVLSDVAKSGYLPGDHHFTISFRTDAPDVRISRRLAEQW 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P ++TI++Q+Q+ +L+V D F V LSF ++PE L IPF A+ GF+DPSV F L F+
Sbjct: 61 PHELTIILQHQYSNLEVDDEGFGVTLSFRSIPEHLYIPFAAVTGFFDPSVEFGLRFEGAE 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN-------------- 190
+E+ E P + S + ++K + K Q +
Sbjct: 121 PEEDEEEEEEEEEAAPMRPSLVTAHHPASAAPAAAKPAAAKAQPEKTKKEEAPAEAEEAG 180
Query: 191 -KMASVISLDNFRKK 204
A VIS+D FRKK
Sbjct: 181 ESDAKVISIDAFRKK 195
>gi|254511476|ref|ZP_05123543.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
gi|221535187|gb|EEE38175.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
Length = 155
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 66/179 (36%), Positives = 98/179 (54%), Gaps = 24/179 (13%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D I Y L A+RGL+K VL+ V+ G LPG HHF+IT T GV ++ LR+ Y
Sbjct: 1 MSQD-IDYGNLMHTAMRGLIKTVLTGVSETG-LPGAHHFFITLDTQHEGVELADWLRERY 58
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+ F +L+V +N F + L+F + PE L IP+ AIK F DPSV F L F+
Sbjct: 59 PDEMTIVMQHWFENLEVGENGFAITLNFGDAPEPLYIPYLAIKTFVDPSVEFGLRFEGPE 118
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ E+ ++ ++ + ++ A V+SLD+FRK
Sbjct: 119 DEDEDIH----------------------LTDEAPIEVDVEEPEPQHDADVVSLDSFRK 155
>gi|84517087|ref|ZP_01004443.1| hypothetical protein SKA53_03504 [Loktanella vestfoldensis SKA53]
gi|84508982|gb|EAQ05443.1| hypothetical protein SKA53_03504 [Loktanella vestfoldensis SKA53]
Length = 165
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 66/174 (37%), Positives = 91/174 (52%), Gaps = 23/174 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL VA G LPG HHF++TF T V I+ L YP +MT
Sbjct: 15 IDYGNLMHRAMRGLIQQVLENVAKTG-LPGNHHFFVTFDTMHPDVEIADWLSDRYPGEMT 73
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+VIQ+ F +L V D F + L+F + PE L IP++AIK F DPSV F L F+ E
Sbjct: 74 VVIQHWFANLDVTDEGFTITLNFGDNPETLYIPYDAIKTFVDPSVEFGLRFETQDE---- 129
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
P + + +++ K + +K+ A V+SLD FRK
Sbjct: 130 -------------PTAITEAPMHEMAEPDDTKPAARKE-----AEVVSLDKFRK 165
>gi|126737556|ref|ZP_01753286.1| hypothetical protein RSK20926_17982 [Roseobacter sp. SK209-2-6]
gi|126720949|gb|EBA17653.1| hypothetical protein RSK20926_17982 [Roseobacter sp. SK209-2-6]
Length = 157
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 61/175 (34%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I Y L A+RGL++ VL EV G LPG HHF+ITF TN +++ L+ YP +M
Sbjct: 4 EIDYGNLMHNAMRGLIRNVLQEVVDHG-LPGNHHFFITFDTNHPDAQLADWLKDRYPGEM 62
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
T+V+Q+ + +L V ++ F V L+F + PE L IP+++I+ F DPSV F L F+ E
Sbjct: 63 TVVMQHWYDNLTVDEDGFGVTLNFGDAPEPLYIPYDSIETFVDPSVEFGLRFETADEQAG 122
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E + ++ K A V+SLD+FRK
Sbjct: 123 EDEDESEEIVEE--------------------GDEAEEPKKPAEADVVSLDSFRK 157
>gi|149914788|ref|ZP_01903318.1| hypothetical protein RAZWK3B_14384 [Roseobacter sp. AzwK-3b]
gi|149811581|gb|EDM71416.1| hypothetical protein RAZWK3B_14384 [Roseobacter sp. AzwK-3b]
Length = 157
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 63/174 (36%), Positives = 93/174 (53%), Gaps = 21/174 (12%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L +A+RGL++ VL V G LPG HHF+ITF T R++ L++ YP +MT
Sbjct: 5 IDYGKLMHQAMRGLIQRVLVGVQDNG-LPGMHHFFITFDTKHPDARLADWLKERYPSEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ F +L+V ++ F V L+F + PE L IP++AIK F DPSV F L F+
Sbjct: 64 VVMQHWFDNLEVTNDGFSVTLNFGDAPENLYIPYDAIKTFVDPSVEFGLRFET------- 116
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
PD+ + + + D + + A V+SLD+FRK
Sbjct: 117 -------------PDDDEPSGDDPDEDDDITDGIDVPEGERTDAEVVSLDSFRK 157
>gi|255264033|ref|ZP_05343375.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
gi|255106368|gb|EET49042.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
Length = 154
Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats.
Identities = 61/175 (34%), Positives = 94/175 (53%), Gaps = 24/175 (13%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I Y L +A+RGL++ VL++VA+ G LPG+HHF+ITF T V I+ L YP++M
Sbjct: 4 EIDYGNLMHQAMRGLIQNVLNDVAANG-LPGDHHFFITFDTMHPDVEIADWLSDRYPDEM 62
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
+V+Q+ + +L V ++ F V L+F + PE L IP++AIK F DPSV F L F+ + +
Sbjct: 63 MVVMQHWYDNLDVTNDGFSVTLNFGDTPEPLYIPYDAIKTFVDPSVEFGLRFESQDDELP 122
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
++ E V + + A ++SLD+FRK
Sbjct: 123 DEHEAPMDEMV-----------------------EEPDDDAPQEAEIVSLDSFRK 154
>gi|209965295|ref|YP_002298210.1| hypothetical protein RC1_2004 [Rhodospirillum centenum SW]
gi|209958761|gb|ACI99397.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 157
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 73/180 (40%), Positives = 100/180 (55%), Gaps = 23/180 (12%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ + +RYD + + ALRG+V+ L+EV G LPGEHHFY+TF T+ GV+I LR+ Y
Sbjct: 1 MSREPLRYDRMVENALRGVVREALTEVQEDG-LPGEHHFYVTFRTDGAGVKIPDYLREQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P +MTIV+Q QF+ L+V F LSF V ERLVIPF AI GF DPSVNF L+F
Sbjct: 60 PGEMTIVLQYQFYGLEVTPQGFSATLSFGGVHERLVIPFAAITGFADPSVNFGLKFQGAD 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E + E + + + +++ +V++LD FRKK
Sbjct: 120 EEASGEDE----------------------ADGEAAAEDDTPAEESRTGTVVALDAFRKK 157
>gi|89069092|ref|ZP_01156465.1| hypothetical protein OG2516_15244 [Oceanicola granulosus HTCC2516]
gi|89045265|gb|EAR51331.1| hypothetical protein OG2516_15244 [Oceanicola granulosus HTCC2516]
Length = 154
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 68/174 (39%), Positives = 89/174 (51%), Gaps = 24/174 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL +VA G LPG HHF+ITF T V I+ L YP +MT
Sbjct: 5 IDYGNLMHRAMRGLIQQVLQDVAEEG-LPGNHHFFITFDTMHPDVEIADWLSDRYPGEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ F L+V D F V L+F + PE L IP++AIK F DPSV F L F+ E E+
Sbjct: 64 VVMQHWFDGLEVTDEGFSVTLNFGDSPEPLYIPYDAIKTFVDPSVEFGLRFETQEEDDED 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + +PD K A V+SLD FRK
Sbjct: 124 EEAPMDEMVEDDTPDAAPKE-----------------------AEVVSLDRFRK 154
>gi|83942476|ref|ZP_00954937.1| hypothetical protein EE36_15587 [Sulfitobacter sp. EE-36]
gi|83953695|ref|ZP_00962416.1| hypothetical protein NAS141_05708 [Sulfitobacter sp. NAS-14.1]
gi|83841640|gb|EAP80809.1| hypothetical protein NAS141_05708 [Sulfitobacter sp. NAS-14.1]
gi|83846569|gb|EAP84445.1| hypothetical protein EE36_15587 [Sulfitobacter sp. EE-36]
Length = 156
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 58/174 (33%), Positives = 90/174 (51%), Gaps = 22/174 (12%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L +A+RGL++ VL +VA+ G LPG HHF+ITF T+ ++ L YP +MT
Sbjct: 5 IEYGNLMHDAMRGLIRQVLLDVAANG-LPGNHHFFITFDTSHPDAELADWLSDRYPGEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ + L+V + F V L+F + PE + IP++AI+ F DPSV F L+F+ ++
Sbjct: 64 VVMQHWYDKLEVTEEGFSVTLNFGDAPEPMYIPYDAIRTFVDPSVEFGLKFEQQEPGQQD 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ E + K A ++SLD+FRK
Sbjct: 124 EDEDLPQQDESELEVEEEAP---------------------KAAEIVSLDSFRK 156
>gi|302383259|ref|YP_003819082.1| stringent starvation protein B [Brevundimonas subvibrioides ATCC
15264]
gi|302193887|gb|ADL01459.1| Stringent starvation protein B [Brevundimonas subvibrioides ATCC
15264]
Length = 161
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 63/185 (34%), Positives = 97/185 (52%), Gaps = 24/185 (12%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQN 79
D D + Y+ LA++ALRG+++ L AS G +PG HHFYITF T GV + +
Sbjct: 1 MADDAPPIDEMHYEKLAQDALRGVIRAALERAASPGGIPGAHHFYITFKTRGPGVSVPPD 60
Query: 80 LRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
+ YP++MT+V+Q+Q+WDL V + F V L F +P+ L +P+ A+ FYDPSV F L+
Sbjct: 61 VVAKYPDEMTVVLQHQYWDLAVEHDLFSVMLKFGGMPKVLTVPYTAVTRFYDPSVQFLLQ 120
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
F+ + V++ + K++ + + V+SLD
Sbjct: 121 FEAP------------------------EPVAEPVAELPAPKRTEPSPSGDDGPKVVSLD 156
Query: 200 NFRKK 204
FRKK
Sbjct: 157 QFRKK 161
>gi|254292820|ref|YP_003058843.1| hypothetical protein Hbal_0444 [Hirschia baltica ATCC 49814]
gi|254041351|gb|ACT58146.1| protein of unknown function DUF1321 [Hirschia baltica ATCC 49814]
Length = 179
Score = 214 bits (545), Expect = 5e-54, Method: Composition-based stats.
Identities = 69/180 (38%), Positives = 112/180 (62%), Gaps = 12/180 (6%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
+ D I Y L++ AL+G+++ L A SLPG HHFYITF T A G+ ++ ++ +P
Sbjct: 11 SEDLIGYKALSEAALKGVMREALRFAAKGESLPGGHHFYITFKTAAPGISMADAIKDRFP 70
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
E+MTIV+Q+Q+WDL+V D++FE+ L F VP+ LVIP+ A+ F+DPSVN+ L F++
Sbjct: 71 EEMTIVVQHQYWDLEVNDDNFEIVLKFGGVPQHLVIPYAAVTRFFDPSVNYGLVFEMGTT 130
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM-ASVISLDNFRKK 204
+ E + G + T +++ S++KS K +++ + +V+SLD FR+K
Sbjct: 131 ALIEGGQQIEFG-----------DDTTEIAEAVSEEKSDKDKSEGEAEGTVVSLDAFRRK 179
>gi|84503521|ref|ZP_01001572.1| hypothetical protein OB2597_03439 [Oceanicola batsensis HTCC2597]
gi|84388011|gb|EAQ01059.1| hypothetical protein OB2597_03439 [Oceanicola batsensis HTCC2597]
Length = 167
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 62/174 (35%), Positives = 98/174 (56%), Gaps = 11/174 (6%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL++VA G LPG HHF+ITF T R++ LR YP +MT
Sbjct: 5 IDYGNLMHRAMRGLIQEVLADVADNG-LPGNHHFFITFDTTHEDARLADWLRDRYPREMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ F +L V D+ F + L+F + PERL IP+++I F DPSV F L F+ + E
Sbjct: 64 VVLQHWFDNLVVGDDGFGISLNFGDSPERLFIPYDSILTFVDPSVEFGLRFETQDQESEA 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + P +++ + ++ + +++ + A V+ LD FRK
Sbjct: 124 EDAEASP------PLRARRDEPETEAEADA----AGDEDEAQDAEVVQLDKFRK 167
>gi|86139918|ref|ZP_01058483.1| hypothetical protein MED193_02785 [Roseobacter sp. MED193]
gi|85823336|gb|EAQ43546.1| hypothetical protein MED193_02785 [Roseobacter sp. MED193]
Length = 158
Score = 214 bits (544), Expect = 8e-54, Method: Composition-based stats.
Identities = 61/175 (34%), Positives = 93/175 (53%), Gaps = 21/175 (12%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I Y L A+RGL++ VL +VA G LPG HHF+ITF TN +++ LR YP M
Sbjct: 4 EIDYGNLMHSAMRGLIRTVLQDVADKG-LPGNHHFFITFDTNHPDAQLADWLRDRYPGAM 62
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
T+V+Q+ + +L+V ++ F + L+F + PE L IP++AI+ F DPSV F L F+ E +
Sbjct: 63 TVVMQHWYDNLEVGEDGFGITLNFGDAPEPLYIPYDAIETFVDPSVEFGLRFEAAEESDD 122
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E ++V + ++ + V+SLD+FRK
Sbjct: 123 E--------------------GDDTVDHLDDEDEAADVAKRPSEGDVVSLDSFRK 157
>gi|163746402|ref|ZP_02153760.1| hypothetical protein OIHEL45_13395 [Oceanibulbus indolifex HEL-45]
gi|161380287|gb|EDQ04698.1| hypothetical protein OIHEL45_13395 [Oceanibulbus indolifex HEL-45]
Length = 159
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 59/174 (33%), Positives = 91/174 (52%), Gaps = 19/174 (10%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L EA+RGL++ VL +++ G LPG HHF+ITF T+ ++ L YP +MT
Sbjct: 5 IDYGNLMHEAMRGLIRKVLQDISDNG-LPGNHHFFITFDTSHPDAELADWLSDRYPGEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ + L V + F + L+F + PE L IP++AI+ F DPSV F L F+ E+
Sbjct: 64 VVMQHWYDGLDVTPDGFAITLNFGDAPEPLYIPYDAIRTFVDPSVEFGLRFEQQESEEED 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
NT + + + + +K A ++SLD+FRK
Sbjct: 124 DDSEENTLDQ------------------TDEDELEVAEEPSKDAEIVSLDSFRK 159
>gi|114767550|ref|ZP_01446304.1| hypothetical protein 1100011001349_R2601_23388 [Pelagibaca
bermudensis HTCC2601]
gi|114540403|gb|EAU43489.1| hypothetical protein R2601_23388 [Roseovarius sp. HTCC2601]
Length = 158
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 66/174 (37%), Positives = 92/174 (52%), Gaps = 21/174 (12%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL+ VL++VA G LPGEHHF+ITF T V ++ L YP +MT
Sbjct: 5 IDYGNLMHRAMRGLIHDVLTDVAERG-LPGEHHFFITFDTQYPDVELADWLSDRYPGEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q++F DL+V ++ F V LSF PERL IP++AIK F DPSV F L F+ + E+
Sbjct: 64 VVLQHRFDDLEVGEDGFAVTLSFGEAPERLYIPYHAIKTFVDPSVEFGLRFETQEDSDED 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + P+ + A V+ LD+FRK
Sbjct: 124 DEDEDDPTPPEGGPER--------------------PSDGQHDAEVVRLDSFRK 157
>gi|83951366|ref|ZP_00960098.1| hypothetical protein ISM_12425 [Roseovarius nubinhibens ISM]
gi|83836372|gb|EAP75669.1| hypothetical protein ISM_12425 [Roseovarius nubinhibens ISM]
Length = 170
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 61/174 (35%), Positives = 91/174 (52%), Gaps = 8/174 (4%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+R L++ VL V G LPG HHF+ITF T ++ LR YP +MT
Sbjct: 5 IDYGKLMHAAMRRLIQDVLMGVQKDG-LPGAHHFFITFDTTHPEATMADWLRDRYPAEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ + +L V D F + L+F + PE L IP++AI+ F DPSV F L F+ + EE
Sbjct: 64 VVVQHWYDNLNVTDEGFGITLNFGDAPENLYIPYDAIQTFVDPSVEFGLRFEQQSDDDEE 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + + D++ ++ T+ A V+SLD+FRK
Sbjct: 124 DEDEDDEDLLDEDGSLDDEDMEDASEDRHGDAPRTE-------AEVVSLDSFRK 170
>gi|126735815|ref|ZP_01751560.1| hypothetical protein RCCS2_18106 [Roseobacter sp. CCS2]
gi|126715002|gb|EBA11868.1| hypothetical protein RCCS2_18106 [Roseobacter sp. CCS2]
Length = 159
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 62/177 (35%), Positives = 89/177 (50%), Gaps = 19/177 (10%)
Query: 27 YDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPE 86
I Y L A+RGL++ VL++V G LPG+HHF++TF T V I+ L YP
Sbjct: 2 TSTIDYGNLMHRAMRGLIQEVLTDVQKDG-LPGQHHFFVTFDTMHPDVEIADWLSDRYPG 60
Query: 87 KMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEH 146
+MT+VIQ+ F +L+V + F + L+F + PE L IP++AIK F DPSV F L F+ E
Sbjct: 61 EMTVVIQHWFDNLEVTNEGFTISLNFGDNPETLYIPYDAIKTFVDPSVEFGLRFETQDED 120
Query: 147 IEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + + + + K A V+SLD FRK
Sbjct: 121 EDTAMSDVEEAPMDEMV------------------EPEDANDAPKEADVVSLDQFRK 159
>gi|163736230|ref|ZP_02143649.1| hypothetical protein RGBS107_13901 [Phaeobacter gallaeciensis
BS107]
gi|163741242|ref|ZP_02148634.1| hypothetical protein RG210_17320 [Phaeobacter gallaeciensis 2.10]
gi|161385595|gb|EDQ09972.1| hypothetical protein RG210_17320 [Phaeobacter gallaeciensis 2.10]
gi|161390100|gb|EDQ14450.1| hypothetical protein RGBS107_13901 [Phaeobacter gallaeciensis
BS107]
Length = 158
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 62/175 (35%), Positives = 89/175 (50%), Gaps = 20/175 (11%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I Y L A+RGL++ VL VA G LPG HHF+ITF T+ ++ L YP +M
Sbjct: 4 EIDYGNLMHSAMRGLIRSVLDGVAEHG-LPGNHHFFITFDTSHPDAELADWLSDRYPGEM 62
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
T+V+Q+ F +L V ++ F + L+F + PE L IP++AIK F DPSV F L F+ + E
Sbjct: 63 TVVMQHWFDNLDVGEDGFAITLNFGDAPEPLYIPYDAIKTFVDPSVEFGLRFESPEDDEE 122
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ D + + + K A V+SLD+FRK
Sbjct: 123 VEEMVAEL-------------------DDDIEIEVDEDPADKKPADVVSLDSFRK 158
>gi|85702989|ref|ZP_01034093.1| hypothetical protein ROS217_19647 [Roseovarius sp. 217]
gi|85671917|gb|EAQ26774.1| hypothetical protein ROS217_19647 [Roseovarius sp. 217]
Length = 163
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 63/174 (36%), Positives = 90/174 (51%), Gaps = 27/174 (15%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VLS+V S G LPG HHF+ITF T +++ L++ YP +MT
Sbjct: 16 IDYGNLMHRAMRGLIQEVLSKVQSEG-LPGAHHFFITFDTKHPEAKLANWLKQRYPSEMT 74
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ + DLKV ++ F V L+F + PERL +P++AI+ F DPSV F L F+ E+
Sbjct: 75 VVMQHWYDDLKVTNDGFAVTLNFGDAPERLYVPYDAIQTFVDPSVEFGLRFETQEVDEED 134
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
N A V+SLD+FRK
Sbjct: 135 DDLDDTEPPDDDPSPNK--------------------------AEVVSLDSFRK 162
>gi|256113952|ref|ZP_05454740.1| hypothetical protein Bmelb3E_14330 [Brucella melitensis bv. 3 str.
Ether]
gi|265995299|ref|ZP_06107856.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|262766412|gb|EEZ12201.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
Length = 112
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 75/113 (66%), Positives = 92/113 (81%), Gaps = 1/113 (0%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+E A G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEAAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFE 137
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFE
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFE 112
>gi|163793370|ref|ZP_02187345.1| hypothetical protein BAL199_02644 [alpha proteobacterium BAL199]
gi|159181172|gb|EDP65687.1| hypothetical protein BAL199_02644 [alpha proteobacterium BAL199]
Length = 158
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 71/180 (39%), Positives = 99/180 (55%), Gaps = 23/180 (12%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D RYD++ + ALRG+V+ L + G LPG HHFY+TF T A GV I L + Y
Sbjct: 1 MAEDLFRYDLMVENALRGVVRDALRRALNHG-LPGNHHFYLTFKTRAPGVEIPSYLIERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q Q+W+L+V D F V LSF+++ ERLV+P+ A+ GF DPSV F L+F
Sbjct: 60 PDEMTIVLQFQYWNLEVEDQRFSVMLSFNDIRERLVVPYEALTGFADPSVQFGLQFQ--- 116
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+G +G + PD + + V+SLD+FRKK
Sbjct: 117 -------DGSASGSGDSDPD------------PTPPEGGGDAPADGGSGEVVSLDHFRKK 157
>gi|260433819|ref|ZP_05787790.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417647|gb|EEX10906.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 155
Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats.
Identities = 64/174 (36%), Positives = 92/174 (52%), Gaps = 25/174 (14%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL+K VL V+ G LPG HHF+ITF T GV ++ LR+ YP++MT
Sbjct: 5 IDYGNLMHTAMRGLIKTVLQGVSETG-LPGSHHFFITFDTRTPGVELADWLRQRYPDEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q+ F +L V D+ F + L+F + PE L IPF+AI+ F DPSV F L F+ + E
Sbjct: 64 IVVQHWFENLAVDDDGFAITLNFGDSPEPLYIPFSAIQTFVDPSVEFGLRFESPEDEDEL 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + + + + A ++SLD+FRK
Sbjct: 124 E------------------------TVEDVSIEVEAEDEPQHDADIVSLDSFRK 153
>gi|298293049|ref|YP_003694988.1| hypothetical protein Snov_3094 [Starkeya novella DSM 506]
gi|296929560|gb|ADH90369.1| protein of unknown function DUF1321 [Starkeya novella DSM 506]
Length = 243
Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 87/244 (35%), Positives = 116/244 (47%), Gaps = 65/244 (26%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D IRYD+L ++ALR +V+ VL++VA G LPG+HH Y++F T A GVR+S L++ Y
Sbjct: 1 MSVDLIRYDLLVQDALRSVVRRVLTDVARDG-LPGDHHLYVSFDTRASGVRLSPRLKERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWDL V D FEVGLSF+ +PERL IPF A+KGF+DPSV F L+F+
Sbjct: 60 PEEMTIVLQHQFWDLIVSDQFFEVGLSFNGIPERLHIPFAALKGFFDPSVKFGLQFEPVA 119
Query: 145 EHIE------------------------------------------EKLEGGNTGKVLTS 162
E E +
Sbjct: 120 EEDEDAEDEAAAPAPVAPVTPIGEARPTSVPSTRAAARPAKEAAKLAPKTESRPAPAKPT 179
Query: 163 PDNFDKNQTNSVSQDSSKKKSTKKQNKNKM----------------------ASVISLDN 200
P K + V+ + K S K +K A V+ LD
Sbjct: 180 PVPAAKAEPKPVAVPKADKASEKSSDKPAAKGGEGEGKDDGKRGGQGGAQGGAQVVRLDT 239
Query: 201 FRKK 204
FRKK
Sbjct: 240 FRKK 243
>gi|315498760|ref|YP_004087564.1| stringent starvation protein b [Asticcacaulis excentricus CB 48]
gi|315416772|gb|ADU13413.1| Stringent starvation protein B [Asticcacaulis excentricus CB 48]
Length = 171
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 74/185 (40%), Positives = 99/185 (53%), Gaps = 14/185 (7%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQN 79
DT DH+ Y L + ALRG+++ L + + LPG+HHFY+TF T A GV I +
Sbjct: 1 MTDTPSVIDHMDYATLTQNALRGVIREALIKASHPHGLPGDHHFYVTFLTRAEGVTIPDD 60
Query: 80 LRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
L K YP +TIV+Q+Q+ +LKV + V LSF VP+ L P +AI FYDPSV F LE
Sbjct: 61 LLKRYPRDITIVLQHQYRELKVDGDRISVTLSFGGVPKVLRFPLSAITRFYDPSVQFILE 120
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
FDV EE LE + ++ P + + D K + V+SLD
Sbjct: 121 FDV-----EEPLEANDDEGLIAEP---------AAATDEGKPADPDTPPPDTGPKVVSLD 166
Query: 200 NFRKK 204
FRKK
Sbjct: 167 QFRKK 171
>gi|197104332|ref|YP_002129709.1| hypothetical protein PHZ_c0866 [Phenylobacterium zucineum HLK1]
gi|196477752|gb|ACG77280.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 163
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 88/185 (47%), Gaps = 22/185 (11%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQN 79
D + Y+ LA++ALRG+VK L A+ LPG HHFYITF T+A GV +
Sbjct: 1 MAQDPPAQDLMNYEALAQDALRGVVKAALKRAAAPEGLPGAHHFYITFKTDAAGVSGPAD 60
Query: 80 LRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
L YP++MTIV+Q+Q+WDL + F V L F P+RL IP+ A+ FYDPSV F L+
Sbjct: 61 LLSKYPDEMTIVLQHQYWDLAPGETFFSVTLQFGGQPKRLSIPYAAVTRFYDPSVQFLLQ 120
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
F+ K + A ++SLD
Sbjct: 121 FEPPPAVQTAPAAAAPEPKAVP----------------------DAAPPAEGEAKIVSLD 158
Query: 200 NFRKK 204
FRKK
Sbjct: 159 QFRKK 163
>gi|56696782|ref|YP_167143.1| hypothetical protein SPO1907 [Ruegeria pomeroyi DSS-3]
gi|56678519|gb|AAV95185.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
Length = 151
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 63/179 (35%), Positives = 93/179 (51%), Gaps = 29/179 (16%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D I Y L A+RGL+K VL++VA G LPG HHF+ITF T GV+++ L Y
Sbjct: 1 MSRD-IDYGNLMHTAMRGLIKTVLADVAQHG-LPGAHHFFITFDTRYEGVQLADWLADRY 58
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P +MTIV+Q+ + +L V ++ F + L+F + PE L IP++AI+ F DPSV F L F+
Sbjct: 59 PGEMTIVMQHWYENLDVGEDGFAITLNFGDSPEPLYIPYDAIRTFVDPSVEFGLRFESPD 118
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+++ + + A V+SLD+FRK
Sbjct: 119 FDEDDEDDIEVEEEPD---------------------------APKPDAEVVSLDSFRK 150
>gi|146276774|ref|YP_001166933.1| hypothetical protein Rsph17025_0722 [Rhodobacter sphaeroides ATCC
17025]
gi|145555015|gb|ABP69628.1| protein of unknown function DUF1321 [Rhodobacter sphaeroides ATCC
17025]
Length = 153
Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats.
Identities = 67/174 (38%), Positives = 91/174 (52%), Gaps = 25/174 (14%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL +VA G LPG HHF+ITF T V ++ LR YP++MT
Sbjct: 5 IDYGNLMHRAMRGLIQSVLEDVAEHG-LPGAHHFFITFDTTHPDVAMADWLRARYPQEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+VIQ+ + +L V D F + L+F N PE LVIPF+A++ F DPSV F L F+ H + EE
Sbjct: 64 VVIQHWYENLAVDDRGFSITLNFGNQPEPLVIPFDAVRTFVDPSVEFGLRFETHEDEDEE 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + G + A V+SLD FRK
Sbjct: 124 EDTDSDEGP------------------------DGDDEPPRHDAQVVSLDKFRK 153
>gi|307945916|ref|ZP_07661252.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307771789|gb|EFO31014.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 158
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 74/119 (62%), Positives = 93/119 (78%), Gaps = 1/119 (0%)
Query: 24 LMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKN 83
M D +RYDIL ++ALRG VK +LSEV G LPGEHHFYI F T A GVRIS L++
Sbjct: 8 QMAEDLLRYDILIQDALRGAVKKILSEVGRTG-LPGEHHFYIAFETTAPGVRISSRLKER 66
Query: 84 YPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV 142
YP++MTIV+Q+QFWDL + ++ FEVGLSF VPE+L++P++AIKGF+DPSV F LEFD
Sbjct: 67 YPQEMTIVLQHQFWDLAIGEHAFEVGLSFGGVPEKLLVPYSAIKGFFDPSVQFALEFDP 125
>gi|114797792|ref|YP_761633.1| hypothetical protein HNE_2955 [Hyphomonas neptunium ATCC 15444]
gi|114737966|gb|ABI76091.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 156
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 68/178 (38%), Positives = 97/178 (54%), Gaps = 23/178 (12%)
Query: 27 YDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPE 86
D+I Y+ L++ A+RG+V+ L + G LPGEHHFYI+F T A GV+I L + +PE
Sbjct: 2 TDYIGYEALSQAAMRGVVREALRRGKTNGGLPGEHHFYISFRTRAPGVKIPPQLVQRFPE 61
Query: 87 KMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEH 146
+MTIV+Q+Q+WDL+V + HFE+ L FS VP+ L IP AI F DPSVNF + F+
Sbjct: 62 EMTIVVQHQYWDLEVHEGHFEIVLKFSGVPQHLSIPLAAITRFVDPSVNFGIAFESQS-- 119
Query: 147 IEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
K+ ++ + K +V+SLD FR+K
Sbjct: 120 ---------------------KDAGVIAPAPTAPIEEPAPTPKVAGETVVSLDAFRRK 156
>gi|329849449|ref|ZP_08264295.1| hypothetical protein ABI_23420 [Asticcacaulis biprosthecum C19]
gi|328841360|gb|EGF90930.1| hypothetical protein ABI_23420 [Asticcacaulis biprosthecum C19]
Length = 181
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQN 79
D ++ D + Y L + ALRG+++ L AS LPGEHHFY+TF T GV + ++
Sbjct: 1 MTDDQISSDLMDYASLTQNALRGVIRQALQRAASPQGLPGEHHFYVTFLTRGSGVSVPED 60
Query: 80 LRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
L YP +TIV+Q+Q+ DL+V D+ F V L+F P+ L +P+ AI F+DP F LE
Sbjct: 61 LLARYPYDITIVLQHQYRDLRVADDFFRVTLTFGGAPKVLTVPYAAITRFHDPFAQFMLE 120
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
F+V E + + +L + + S +S+ K T+ + VISLD
Sbjct: 121 FEV--EDSRALTQDTDPADMLDDGSEPEVAAPDLASPAASEAKETEAPD--DAPKVISLD 176
Query: 200 NFRKK 204
+FRKK
Sbjct: 177 HFRKK 181
>gi|126726404|ref|ZP_01742245.1| hypothetical protein RB2150_01849 [Rhodobacterales bacterium
HTCC2150]
gi|126704267|gb|EBA03359.1| hypothetical protein RB2150_01849 [Rhodobacterales bacterium
HTCC2150]
Length = 178
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 103/175 (58%), Gaps = 12/175 (6%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I Y L +A+RGLV +L +V + G LPG+HHF++TF T +GV + LR+ YPE++
Sbjct: 16 QIDYARLMHDAMRGLVANLLRDVLANG-LPGDHHFFVTFNTQEKGVVMPDWLRERYPEEI 74
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIVIQ+++ DL V +N F + L F P L +PF AI F DPSV F L+FD E+ +
Sbjct: 75 TIVIQHEYEDLGVQENGFRIVLQFGGTPVALYVPFMAISTFVDPSVEFGLKFDHSDENDD 134
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E +E ++ + DN + +++D + ++ K A ++SLD FRK
Sbjct: 135 EIME------IVENDDNVETIPEAPMAKDVVEDEAPKHD-----AEIVSLDQFRK 178
>gi|110679541|ref|YP_682548.1| hypothetical protein RD1_2277 [Roseobacter denitrificans OCh 114]
gi|109455657|gb|ABG31862.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 135
Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats.
Identities = 55/128 (42%), Positives = 75/128 (58%), Gaps = 1/128 (0%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L EA+RGL++ VL +V G LPGEHHF+ITF T ++ L YP +MT
Sbjct: 5 IDYGNLMHEAMRGLIRKVLLDVCDHG-LPGEHHFFITFDTGHPDAELADWLFDRYPGEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+ + +L+V D F V L+F + PE L IP++AIK F DPSV F L F+ + EE
Sbjct: 64 VVMQHWYDNLEVTDEGFSVTLNFGDAPEPLYIPYDAIKTFVDPSVEFGLRFETQHDEDEE 123
Query: 150 KLEGGNTG 157
Sbjct: 124 AAPAQLPP 131
>gi|260428183|ref|ZP_05782162.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260422675|gb|EEX15926.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 157
Score = 207 bits (526), Expect = 9e-52, Method: Composition-based stats.
Identities = 67/174 (38%), Positives = 92/174 (52%), Gaps = 22/174 (12%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL+ VL++V + G LPGEHHF+ITF T V ++ L YP +MT
Sbjct: 5 IDYGNLMHRAMRGLIHDVLTDVMNRG-LPGEHHFFITFDTQHPDVELADWLSDRYPGEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q++F DL+V + F V LSF PERL IP++AIK F DPSV F L F+ H E ++
Sbjct: 64 VVLQHRFDDLEVTEEGFAVTLSFGEAPERLYIPYDAIKTFVDPSVEFGLRFETHEEEDDD 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + P + + Q A V+ LD FRK
Sbjct: 124 EDDPTPPDGGPDGPGDREPQQ---------------------DAEVVRLDAFRK 156
>gi|148555628|ref|YP_001263210.1| hypothetical protein Swit_2716 [Sphingomonas wittichii RW1]
gi|148500818|gb|ABQ69072.1| protein of unknown function DUF1321 [Sphingomonas wittichii RW1]
Length = 163
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 77/184 (41%), Positives = 100/184 (54%), Gaps = 21/184 (11%)
Query: 21 IDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNL 80
+ I YD + +EALR +V VL EV G LPG+HHFYITF T +GV I ++L
Sbjct: 1 MSDQAPDSLIPYDEIVQEALRAVVGRVLGEVEKAGGLPGDHHFYITFKTQGQGVDIPKHL 60
Query: 81 RKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
+ +P++MTIVIQN+FWDLKV + FEVGLSF+ VP RLVIPF A+ GF DP+VNF L+F
Sbjct: 61 AERFPDEMTIVIQNRFWDLKVRPDGFEVGLSFNQVPARLVIPFAAVTGFVDPAVNFALQF 120
Query: 141 DVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDN 200
+ E G SP ++V+S+D
Sbjct: 121 QAQADDAIEDTGHSFAGNDAPSPPPAPVED---------------------GSNVVSVDF 159
Query: 201 FRKK 204
RKK
Sbjct: 160 TRKK 163
>gi|326388385|ref|ZP_08209981.1| hypothetical protein Y88_3268 [Novosphingobium nitrogenifigens DSM
19370]
gi|326207117|gb|EGD57938.1| hypothetical protein Y88_3268 [Novosphingobium nitrogenifigens DSM
19370]
Length = 161
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 75/158 (47%), Positives = 97/158 (61%), Gaps = 2/158 (1%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGS-LPGEHHFYITFATNARGVRISQNLRKNY 84
I YD + +EALR +V VL +V + GS LPG HHFYITF T A GV I LR+ +
Sbjct: 5 PDSLIPYDEIVQEALRAVVGRVLGQVEASGSVLPGNHHFYITFKTGAPGVSIPDRLRERF 64
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+QN+FWDL V D F VGLSFS +P LVIPF+AI F DP+V+F L+F
Sbjct: 65 PDEMTIVLQNKFWDLNVTDTGFTVGLSFSQIPATLVIPFSAITAFVDPAVDFGLQFQAIG 124
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
+ +E E V SP + +N V+ D +KK
Sbjct: 125 DLDDELHEAAEN-DVPESPVTTADDGSNVVTVDFGRKK 161
>gi|294678349|ref|YP_003578964.1| hypothetical protein RCAP_rcc02828 [Rhodobacter capsulatus SB 1003]
gi|294477169|gb|ADE86557.1| protein of unknown function DUF1321 [Rhodobacter capsulatus SB
1003]
Length = 153
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 69/174 (39%), Positives = 89/174 (51%), Gaps = 25/174 (14%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL+EVA G LPG HHF+ITF T A V ++ L+ YPE+MT
Sbjct: 5 IDYGTLMHRAMRGLIQTVLTEVAEHG-LPGAHHFFITFDTRAPKVEMADWLKSRYPEEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IVIQ+ F +L V D F + L+F N PE LVIPF+A+ F DPSV F L F+ E+
Sbjct: 64 IVIQHWFDNLVVTDEGFSITLNFGNQPEPLVIPFDAVHTFVDPSVEFGLRFESQDSDEED 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ E + A V+SLD FRK
Sbjct: 124 EDEDDEDEPQEEP------------------------EKPRTEAEVVSLDKFRK 153
>gi|85374742|ref|YP_458804.1| hypothetical protein ELI_09575 [Erythrobacter litoralis HTCC2594]
gi|84787825|gb|ABC64007.1| hypothetical protein ELI_09575 [Erythrobacter litoralis HTCC2594]
Length = 195
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 5/177 (2%)
Query: 11 RWQWFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGS-LPGEHHFYITFAT 69
R + + +K + I YD + +EALR +V VL E+ GS LPG HHFYITF T
Sbjct: 19 RGRGYRQLKHMTEDTPDSLIPYDEIVQEALRAVVGRVLGEIQETGSELPGSHHFYITFKT 78
Query: 70 NARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGF 129
A GV I QNLR+ +P++MTIV+QN+FWDL V D F VGLSF+ VP +L IPF AI F
Sbjct: 79 GAPGVDIPQNLRERFPDEMTIVLQNKFWDLNVTDEGFSVGLSFNQVPAQLAIPFAAITAF 138
Query: 130 YDPSVNFELEFDVHI----EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
DP+V+F L+F + E E + + ++ +N V+ D KKK
Sbjct: 139 VDPAVDFGLQFQATVADMAPEQHEDPENDEAEQGGGPAVSDSEDGSNVVTVDFGKKK 195
>gi|330991061|ref|ZP_08315015.1| Fumarate hydratase class I [Gluconacetobacter sp. SXCC-1]
gi|329761882|gb|EGG78372.1| Fumarate hydratase class I [Gluconacetobacter sp. SXCC-1]
Length = 776
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 87/185 (47%), Gaps = 12/185 (6%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
DT + + YD ++A R ++ L A G LPG+HHFY+TF T+ GV + LR
Sbjct: 12 DTALPDSLMPYDSWIEDAYRQVMLRALEHAAEHG-LPGDHHFYLTFRTDWPGVGMPDRLR 70
Query: 82 KNYPEKMTIVIQNQFWDLKVLDNH--FEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
YP ++TIV+Q+QFWDLKV VGLSF V LVIP A+ F DP + L
Sbjct: 71 AQYPHEITIVLQHQFWDLKVDRARQVISVGLSFGGVASTLVIPVAAVSAFADPHIRLALR 130
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
F V + GG V P D + + K+ V+SL
Sbjct: 131 FSVP---EHPPVAGGAPNVVAVQPATAHDAAPVQGGADGTDAE------KDDSPQVVSLA 181
Query: 200 NFRKK 204
FRKK
Sbjct: 182 AFRKK 186
>gi|295688735|ref|YP_003592428.1| hypothetical protein Cseg_1315 [Caulobacter segnis ATCC 21756]
gi|295430638|gb|ADG09810.1| protein of unknown function DUF1321 [Caulobacter segnis ATCC 21756]
Length = 161
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 24/185 (12%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQN 79
T D ++Y+ +A++ALRG+V+ L + A G LP HH YITF T A GV Q+
Sbjct: 1 MSQTEQPEDLMQYEAMAQDALRGVVRAALKKAAEPGGLPEPHHLYITFKTKAVGVSGPQD 60
Query: 80 LRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
L YP++MTIV+Q+Q+WDL ++ F V L F P+RL +P+ A+ FYDPSV F L+
Sbjct: 61 LLGKYPDEMTIVLQHQYWDLAPGESSFSVTLKFGGQPKRLNVPYAAVTRFYDPSVQFALQ 120
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
F E +E+ E + T P + ++ ++SLD
Sbjct: 121 F-ASPEIVEDDPEPEAEPEAKTPP-----------------------PSGDEGPKIVSLD 156
Query: 200 NFRKK 204
FRKK
Sbjct: 157 QFRKK 161
>gi|56552400|ref|YP_163239.1| hypothetical protein ZMO1504 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241761557|ref|ZP_04759644.1| protein of unknown function DUF1321 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260753922|ref|YP_003226815.1| hypothetical protein Za10_1697 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56543974|gb|AAV90128.1| protein of unknown function DUF1321 [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241373865|gb|EER63398.1| protein of unknown function DUF1321 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258553285|gb|ACV76231.1| protein of unknown function DUF1321 [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 163
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 71/176 (40%), Positives = 98/176 (55%), Gaps = 21/176 (11%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I YD + +EALR +V VL V + G LPG+HHFYITF T A GV + +L +PE+M
Sbjct: 9 LIPYDEIVQEALRAVVGRVLGTVQAEGGLPGDHHFYITFKTQASGVSVPPHLLARFPEEM 68
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIVIQN+FWDL V +HF +GLSF +P LVIP++AI F DPSV+F L+F+ E +
Sbjct: 69 TIVIQNRFWDLVVESDHFSIGLSFGGIPSNLVIPYSAITNFVDPSVHFALQFEAQFEEVV 128
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ E + P+ + ++V+S+D RKK
Sbjct: 129 DSEENEPEPEKRPLPEAKPIEE---------------------GSNVVSVDFSRKK 163
>gi|114328472|ref|YP_745629.1| hypothetical protein GbCGDNIH1_1808 [Granulibacter bethesdensis
CGDNIH1]
gi|114316646|gb|ABI62706.1| hypothetical protein GbCGDNIH1_1808 [Granulibacter bethesdensis
CGDNIH1]
Length = 231
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 97/188 (51%), Gaps = 10/188 (5%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
+ YD ++ALR +V L VA+ G +P HHFYITF T+ GV I L+ YP
Sbjct: 43 PESLLPYDEWTEQALRQVVARALEHVANDG-MPEGHHFYITFRTDYFGVSIPSRLKAQYP 101
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+MTIV+Q+QFWDL V + F VGLSF V L IPF A+ GF DP V L F
Sbjct: 102 HEMTIVLQHQFWDLAVGPDSFSVGLSFGGVASTLRIPFAALLGFADPHVGVGLRFQADEP 161
Query: 146 HIE---------EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
E E +G +GK+ T P + + T S + ++++ + V+
Sbjct: 162 GDENASEDERDDEAEDGSESGKLATFPGSAAASSTASPATAEGEQENEDSASAQSAPQVV 221
Query: 197 SLDNFRKK 204
SLD FR++
Sbjct: 222 SLDAFRRR 229
>gi|254487335|ref|ZP_05100540.1| conserved hypothetical protein [Roseobacter sp. GAI101]
gi|214044204|gb|EEB84842.1| conserved hypothetical protein [Roseobacter sp. GAI101]
Length = 144
Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 85/168 (50%), Gaps = 24/168 (14%)
Query: 36 AKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQ 95
+A+RGL++ VL +VA+ G LPG HHF+ITF T ++ L YP +MT+V+Q+
Sbjct: 1 MHDAMRGLIRQVLLDVAANG-LPGNHHFFITFDTEHPDAELADWLSDRYPGEMTVVMQHW 59
Query: 96 FWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGN 155
+ L+V + F V L+F + PE L IP++AI+ F DPSV F L+F+ ++
Sbjct: 60 YDKLEVTEEGFSVTLNFGDAPEPLYIPYDAIRTFVDPSVEFGLKFEQQDSGSGDRALEQK 119
Query: 156 TGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
L + K A ++SLD+FRK
Sbjct: 120 EESELEVAEEAPKA-----------------------AEIVSLDSFRK 144
>gi|77462689|ref|YP_352193.1| hypothetical protein RSP_2139 [Rhodobacter sphaeroides 2.4.1]
gi|126461582|ref|YP_001042696.1| hypothetical protein Rsph17029_0813 [Rhodobacter sphaeroides ATCC
17029]
gi|332557572|ref|ZP_08411894.1| hypothetical protein RSWS8N_00935 [Rhodobacter sphaeroides WS8N]
gi|77387107|gb|ABA78292.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
gi|126103246|gb|ABN75924.1| protein of unknown function DUF1321 [Rhodobacter sphaeroides ATCC
17029]
gi|332275284|gb|EGJ20599.1| hypothetical protein RSWS8N_00935 [Rhodobacter sphaeroides WS8N]
Length = 152
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 70/174 (40%), Positives = 91/174 (52%), Gaps = 26/174 (14%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL +VA G LPG HHF+ITF T V ++ LR YP++MT
Sbjct: 5 IDYGNLMHRAMRGLIQSVLEDVAEHG-LPGAHHFFITFDTTHPDVAMADWLRARYPQEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+VIQ+ + +L D+ F V L+F N PE LVIPF+A++ F DPSV F L F+ H E EE
Sbjct: 64 VVIQHWYENLSADDHGFSVTLNFGNQPEPLVIPFDAVRTFVDPSVEFGLRFETHEEDEEE 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ G P D A V+SLD FRK
Sbjct: 124 ETGGDEDPDGDDEPPRHD-------------------------AQVVSLDKFRK 152
>gi|254460264|ref|ZP_05073680.1| conserved hypothetical protein [Rhodobacterales bacterium HTCC2083]
gi|206676853|gb|EDZ41340.1| conserved hypothetical protein [Rhodobacteraceae bacterium
HTCC2083]
Length = 154
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 61/168 (36%), Positives = 90/168 (53%), Gaps = 14/168 (8%)
Query: 36 AKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQ 95
A+RGL+K VL +V G LPGEHHF+ITF T V+I+ LR+ YP +MT+V+Q+
Sbjct: 1 MHTAMRGLIKKVLLDVKDQG-LPGEHHFFITFDTTHPDVQIADWLRERYPAEMTVVVQHW 59
Query: 96 FWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGN 155
F +L + D+ F + L+F + PE L IPF+A++ F DPSV F L F+
Sbjct: 60 FDNLDIRDDGFSITLNFGDAPEPLNIPFDALRTFVDPSVEFGLRFEADE----------- 108
Query: 156 TGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
P +Q ++ + ++ K A ++SLD FRK
Sbjct: 109 --DDEEEPALHSVDQEAPETEPAEIMLVDEEDAPKKDAEIVSLDAFRK 154
>gi|260577107|ref|ZP_05845085.1| protein of unknown function DUF1321 [Rhodobacter sp. SW2]
gi|259020685|gb|EEW24003.1| protein of unknown function DUF1321 [Rhodobacter sp. SW2]
Length = 154
Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 67/174 (38%), Positives = 92/174 (52%), Gaps = 24/174 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL++VA G LPG HHF+ITF T V+I++ L YP +MT
Sbjct: 5 IDYGNLMHRAMRGLIQSVLADVARDG-LPGAHHFFITFDTTHPDVQIAKWLHDRYPAEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+VIQ+ F DL V D F + L+F N PE LVIPF+++ F DPSV F L F+ + ++
Sbjct: 64 VVIQHWFEDLIVTDKGFSITLNFGNQPEPLVIPFDSLLTFVDPSVEFGLRFEPQGDAEDD 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ E G+ + K A V+SLD FRK
Sbjct: 124 EDEAGDIDDDDDE-----------------------PEAKPHAAEVVSLDKFRK 154
>gi|167647321|ref|YP_001684984.1| hypothetical protein Caul_3359 [Caulobacter sp. K31]
gi|167349751|gb|ABZ72486.1| protein of unknown function DUF1321 [Caulobacter sp. K31]
Length = 161
Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 90/185 (48%), Gaps = 24/185 (12%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQN 79
T D ++Y+ +A++ALRG+VK L + A+ G LP HH YITF T A GV Q+
Sbjct: 1 MAQTNPPEDLMQYEAMAQDALRGVVKAALRKAAAPGGLPEPHHLYITFKTQAAGVSGPQD 60
Query: 80 LRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
L YP++MTI++Q+Q+WDL + F V L F P+RL +P+ A+ FYDPSV F L+
Sbjct: 61 LLGKYPDEMTIILQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAAVTRFYDPSVQFALQ 120
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
F+ S + + +ISLD
Sbjct: 121 FEAPEIAPPAPEPEPEPEL------------------------SAPTEGGDDAPKIISLD 156
Query: 200 NFRKK 204
FRKK
Sbjct: 157 QFRKK 161
>gi|221638549|ref|YP_002524811.1| hypothetical protein RSKD131_0450 [Rhodobacter sphaeroides KD131]
gi|221159330|gb|ACM00310.1| Hypothetical Protein RSKD131_0450 [Rhodobacter sphaeroides KD131]
Length = 153
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 69/174 (39%), Positives = 91/174 (52%), Gaps = 25/174 (14%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+RGL++ VL +VA G LPG HHF+ITF T V ++ LR YP++MT
Sbjct: 5 IDYGNLMHRAMRGLIQSVLEDVAEHG-LPGAHHFFITFDTTHPDVAMADWLRARYPQEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+VIQ+ + +L D+ F V L+F N PE LVIPF+A++ F DPSV F L F+ H E EE
Sbjct: 64 VVIQHWYENLSADDHGFSVTLNFGNQPEPLVIPFDAVRTFVDPSVEFGLRFETHEEEDEE 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
GG+ + A V+SLD FRK
Sbjct: 124 GETGGDEDPDGDD------------------------EPPRHDAQVVSLDKFRK 153
>gi|114768944|ref|ZP_01446570.1| hypothetical protein OM2255_04420 [alpha proteobacterium HTCC2255]
gi|114549861|gb|EAU52742.1| hypothetical protein OM2255_04420 [alpha proteobacterium HTCC2255]
Length = 156
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 59/178 (33%), Positives = 99/178 (55%), Gaps = 23/178 (12%)
Query: 27 YDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPE 86
D I Y + ++A++ L+ VL +++ G LPG HH++I+F T GV ++ +++ YPE
Sbjct: 2 TDTINYAQMMQKAMQSLMIDVLKKISKNG-LPGNHHYFISFDTKFEGVVVADWIKERYPE 60
Query: 87 KMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEH 146
+MTIVIQ+ F +L+V ++F + L+F + PE L IP+N+I F DPSV F L F+
Sbjct: 61 EMTIVIQHWFDNLEVNADNFSITLNFGDNPENLTIPWNSISTFVDPSVEFGLRFEDEANE 120
Query: 147 IEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ +E K++ + ++N +A ++SLD+FRKK
Sbjct: 121 DIDAVEEIPESKMVII----------------------EDDDENNVAEIVSLDSFRKK 156
>gi|300021801|ref|YP_003754412.1| hypothetical protein Hden_0266 [Hyphomicrobium denitrificans ATCC
51888]
gi|299523622|gb|ADJ22091.1| protein of unknown function DUF1321 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 219
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 76/214 (35%), Positives = 109/214 (50%), Gaps = 40/214 (18%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L +EA+RG+V+ VL ++ G LPGEHHFYI+F T A G +S+ L++ YP +MT
Sbjct: 7 IDYAKLQQEAMRGVVRAVLQQIVKSG-LPGEHHFYISFLTQAPGAIVSKRLKEKYPSEMT 65
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q++FWDL V D+ FEV L+F +PERLV+PF+AIK F DPSV + L+FD + E
Sbjct: 66 IVLQHRFWDLIVSDDRFEVKLTFDGIPERLVVPFSAIKVFIDPSVRYGLQFDDDVSDNEP 125
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQ---------------------- 187
E + + D + T K ++ +K
Sbjct: 126 MHEPRHAMTADATYDQIGEAGTEVPRTTPKKPRAPRKPRVADKDAAARDPAATVPPSPEP 185
Query: 188 -----------------NKNKMASVISLDNFRKK 204
++ A ++SLD FRKK
Sbjct: 186 ATRAGEVDAKDDDDATAPPSEGAKILSLDQFRKK 219
>gi|144897726|emb|CAM74590.1| protein containing DUF1321 [Magnetospirillum gryphiswaldense MSR-1]
Length = 163
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 64/180 (35%), Positives = 94/180 (52%), Gaps = 17/180 (9%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D +RYD + ++ALRG+V+ L+ A G L G+HHFYITF T G+ + ++ +
Sbjct: 1 MSEDTLRYDKMVEDALRGVVREALTITARDG-LFGDHHFYITFRTRFPGIGMGDHILARH 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFW L+V + F V LSFS E L++PF A+ GF DPS F L+F
Sbjct: 60 PEEMTIVLQHQFWGLEVDETFFRVTLSFSGKSETLIVPFAAVTGFADPSAKFGLQFQAMD 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+++ E + ++ VI+LD FRKK
Sbjct: 120 GDDDDEAEDEAVEAEAEETAATPVTDIPADAE----------------GKVIALDAFRKK 163
>gi|296283283|ref|ZP_06861281.1| hypothetical protein CbatJ_06661 [Citromicrobium bathyomarinum
JL354]
Length = 170
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 71/180 (39%), Positives = 98/180 (54%), Gaps = 16/180 (8%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEV-ASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
I YD + +EALR +V VL E+ A G+LPG HHFYITF T GV I +LR+ +
Sbjct: 6 PDSLIPYDQIVQEALRAVVGSVLGEIEAGGGTLPGNHHFYITFKTGVPGVEIPDHLRERF 65
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+QN+FWDL V + F VGLSF+ LV+PF+AI F DP+V+F L+F
Sbjct: 66 PDEMTIVLQNKFWDLNVTEVGFSVGLSFNQRSSHLVVPFSAITAFVDPAVDFGLQFQAT- 124
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+V P D N S D+ + ++V+++D RKK
Sbjct: 125 -------------EVEDYPTPTDAAG-NDGSDDAERDPREAVTKNEDGSNVVTVDFGRKK 170
>gi|332187812|ref|ZP_08389546.1| hypothetical protein SUS17_2911 [Sphingomonas sp. S17]
gi|332012162|gb|EGI54233.1| hypothetical protein SUS17_2911 [Sphingomonas sp. S17]
Length = 161
Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats.
Identities = 75/180 (41%), Positives = 100/180 (55%), Gaps = 23/180 (12%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
+ I YD + +EALR +V VL VA G LPG HHFYITF T A GV I Q L + +
Sbjct: 5 LPDSLIPYDDIVQEALRAVVGRVLGPVAETGHLPGTHHFYITFKTQAPGVDIPQRLIERF 64
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+QN+FWDL V +N F VGLSF+ VP +LVIP++AI F+DP V FEL F V
Sbjct: 65 PDEMTIVLQNRFWDLTVDENRFSVGLSFNQVPSKLVIPYSAITRFHDPEVQFELGFHV-- 122
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
D Q + DS++ + ++V+++D RKK
Sbjct: 123 ---------------------ADDPQGDPDPHDSAENDEPVAKPVEDGSNVVAVDFKRKK 161
>gi|254419893|ref|ZP_05033617.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
gi|196186070|gb|EDX81046.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
Length = 156
Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 91/185 (49%), Gaps = 29/185 (15%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQN 79
D D ++Y+ LA EALRG+++ L V + G LPG HHFYITF T A GV I +
Sbjct: 1 MTDQTPPVDEMQYERLAHEALRGVIRSALDHVLAEG-LPGAHHFYITFKTRAAGVSIPPD 59
Query: 80 LRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
+ YP++MT+V+Q+Q+ DL+V + F V L F VP L +P++A+ FYDPSV F L+
Sbjct: 60 MLAKYPDEMTVVLQHQYEDLQVEADRFSVKLRFGGVPRTLAMPYSAVTRFYDPSVQFLLQ 119
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
FD + V + V+SLD
Sbjct: 120 FD----------------------------EPEIVEAVEEATPPEDPTPGSDGPKVVSLD 151
Query: 200 NFRKK 204
FRKK
Sbjct: 152 QFRKK 156
>gi|83593540|ref|YP_427292.1| hypothetical protein Rru_A2205 [Rhodospirillum rubrum ATCC 11170]
gi|83576454|gb|ABC23005.1| Protein of unknown function DUF1321 [Rhodospirillum rubrum ATCC
11170]
Length = 196
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 66/177 (37%), Positives = 94/177 (53%), Gaps = 6/177 (3%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
+H YD + ++ALRG+++ L +V LPG HHFYITF T+ GV +S LR +P+
Sbjct: 25 EHFAYDRMVEQALRGVLREAL-KVTERQGLPGAHHFYITFHTSHPGVVLSPRLRSQHPDA 83
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
MTIV+QNQFWDL V D+ F V LSF + E L IPF A+ F DP F L+F +E
Sbjct: 84 MTIVLQNQFWDLAVDDDLFSVSLSFGGIRELLTIPFEAVTAFADPHATFGLQFQGALEQD 143
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+++ + D + D ++ +V++LD FRKK
Sbjct: 144 DDEEDDEEDEDEDDDGIETDGPGRAAPPIDDQDDVRDGAKD-----NVVTLDTFRKK 195
>gi|329889829|ref|ZP_08268172.1| hypothetical protein BDIM_15200 [Brevundimonas diminuta ATCC 11568]
gi|328845130|gb|EGF94694.1| hypothetical protein BDIM_15200 [Brevundimonas diminuta ATCC 11568]
Length = 155
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 64/175 (36%), Positives = 92/175 (52%), Gaps = 20/175 (11%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
+ Y+ LA++ALRG++++ L A +PG HHFYITF T GV + ++ YP++MT
Sbjct: 1 MHYEQLAQDALRGVIRLALERAAEPEGIPGAHHFYITFKTRGAGVSVPPDVLAKYPDEMT 60
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+Q+WDL V + F V L F P+ L +P++A+ FYDPSV F L+FD
Sbjct: 61 VVLQHQYWDLAVEPDLFSVMLKFGGAPKVLTVPYSAVVRFYDPSVQFLLQFD-------- 112
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ E SP D + D K V+SLD FRKK
Sbjct: 113 EPEIVEAEIAPLSPPARDPDAAPPQPSDDDGPK------------VVSLDQFRKK 155
>gi|310816105|ref|YP_003964069.1| hypothetical protein EIO_1645 [Ketogulonicigenium vulgare Y25]
gi|308754840|gb|ADO42769.1| conserved hypothetical protein [Ketogulonicigenium vulgare Y25]
Length = 146
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 22/168 (13%)
Query: 36 AKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQ 95
A+RGL++ +L ++A G LPGEHHF+ITF TN V ++ L YP +MT+V+Q+
Sbjct: 1 MHRAMRGLIQEILGDIAQTG-LPGEHHFFITFDTNHPDVELADWLFDRYPHEMTVVLQHW 59
Query: 96 FWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGN 155
F DL V D F V L+F + PE + +P++AI+ F DPSV F L F+ E +++ E G
Sbjct: 60 FQDLNVTDEGFSVVLNFGDNPEPIYVPYDAIRTFVDPSVEFGLRFEAQDEDEDDEDEDGE 119
Query: 156 TGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
A ++SLD FR+
Sbjct: 120 APMAEM---------------------VEPDDTPRPQAEIVSLDKFRR 146
>gi|94498512|ref|ZP_01305068.1| hypothetical protein SKA58_04436 [Sphingomonas sp. SKA58]
gi|94422055|gb|EAT07100.1| hypothetical protein SKA58_04436 [Sphingomonas sp. SKA58]
Length = 158
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 74/162 (45%), Positives = 99/162 (61%), Gaps = 4/162 (2%)
Query: 21 IDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNL 80
+ + I YD + +EALR +V VL EV G LPG HHFYITF T A V I ++L
Sbjct: 1 MSDDLPDSLIPYDEIVQEALRAVVGRVLDEVQQTGGLPGTHHFYITFKTQAPDVDIPKHL 60
Query: 81 RKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
+ +P++MTIV+QN+FWDLKV D HFEV L+F+ V LVIPF+AI F DP+VNF L+F
Sbjct: 61 VERFPDEMTIVLQNKFWDLKVSDQHFEVSLTFNQVAAHLVIPFSAITAFVDPAVNFALQF 120
Query: 141 DVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
V + I E + P +++ +N V+ D KKK
Sbjct: 121 QVQSDEIPEPHDEAENDG----PQVTNEDGSNVVTVDFGKKK 158
>gi|126732385|ref|ZP_01748184.1| hypothetical protein SSE37_05532 [Sagittula stellata E-37]
gi|126707024|gb|EBA06091.1| hypothetical protein SSE37_05532 [Sagittula stellata E-37]
Length = 145
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 60/168 (35%), Positives = 89/168 (52%), Gaps = 23/168 (13%)
Query: 36 AKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQ 95
A+RGL++ VL+ V+ G LPG+HHF+ITF T V ++ L++ YP +MT+V+QN
Sbjct: 1 MHRAMRGLIQEVLTGVSEHG-LPGDHHFFITFDTRHPEVELADWLKQRYPGEMTVVVQNW 59
Query: 96 FWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGN 155
+ DL+V D F + L+F + PERL IP++AI+ F DPSV F L F+ +E +
Sbjct: 60 YEDLEVGDEGFAITLNFGDAPERLSIPYDAIRTFVDPSVEFGLRFESQDSEEDEGDDDPT 119
Query: 156 TGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
K + ++ A V+SLD FRK
Sbjct: 120 PDGDGPG----------------------KPEAQHHDAEVVSLDRFRK 145
>gi|149185605|ref|ZP_01863921.1| hypothetical protein ED21_21309 [Erythrobacter sp. SD-21]
gi|148830825|gb|EDL49260.1| hypothetical protein ED21_21309 [Erythrobacter sp. SD-21]
Length = 178
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 67/179 (37%), Positives = 98/179 (54%), Gaps = 20/179 (11%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGS-LPGEHHFYITFATNARGVRISQNLRKNY 84
I YD + +EALR +V VL E+ GS LPG HHFYITF T+A GV I +L + +
Sbjct: 18 PDSLIPYDTIVQEALRAVVGRVLGEIEQGGSELPGTHHFYITFKTHAPGVSIPAHLSERF 77
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+QN+FWDL V ++ F VGLSF+ +P L IP+ AI F DP+V+F L+F +
Sbjct: 78 PDEMTIVLQNKFWDLNVREDGFSVGLSFNQIPAELDIPYAAITQFVDPAVDFGLQFQATV 137
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ T+ D + +S + ++V+++D RK
Sbjct: 138 ADM-------------------APAPTDEAGNDEEQAESPPVEGAEDGSNVVTVDFGRK 177
>gi|87199027|ref|YP_496284.1| hypothetical protein Saro_1005 [Novosphingobium aromaticivorans DSM
12444]
gi|87134708|gb|ABD25450.1| protein of unknown function DUF1321 [Novosphingobium
aromaticivorans DSM 12444]
Length = 166
Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats.
Identities = 73/162 (45%), Positives = 99/162 (61%), Gaps = 5/162 (3%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGS-LPGEHHFYITFATNARGVRISQNLRKNY 84
I YD + +EALR +V VL +V S G LPG HHFYITF T A GV I Q LR+ +
Sbjct: 5 PDSLIPYDEIVQEALRAVVGRVLGQVESAGGVLPGTHHFYITFKTGAPGVDIPQRLRERF 64
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+QN+FWDLKV ++ F VGLSF+ +P L+IPF+AI F DP+V+F L+F +
Sbjct: 65 PDEMTIVLQNKFWDLKVEEDRFTVGLSFNQIPSTLLIPFSAITAFVDPAVDFGLQFQAVV 124
Query: 145 EHIE----EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
+ E E E + + + +N V+ D KKK
Sbjct: 125 DDDEVEPLEPAENDSPEQAERPAVERSDDGSNVVTVDFGKKK 166
>gi|89054882|ref|YP_510333.1| hypothetical protein Jann_2391 [Jannaschia sp. CCS1]
gi|88864431|gb|ABD55308.1| protein of unknown function DUF1321 [Jannaschia sp. CCS1]
Length = 162
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 64/174 (36%), Positives = 91/174 (52%), Gaps = 21/174 (12%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L EA+ G+++ VL VA G LPGEHHF+ITF T V ++ LR+ YPE+M
Sbjct: 8 IPYGRLMHEAVCGVIRDVLDGVAKSG-LPGEHHFFITFDTQHADVDLADWLRERYPEEMM 66
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IVIQN + DL+V ++ F + L+F + PERL IPF++I F DPSV F F+ + +
Sbjct: 67 IVIQNWYDDLQVDNDGFSITLNFGDAPERLRIPFDSIATFVDPSVEFGWRFEQTEDDDDP 126
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
G + + D + + A V+SLD FR+
Sbjct: 127 TPPDGPDAPDDDADSDDDGS--------------------EREAEVVSLDTFRR 160
>gi|103488625|ref|YP_618186.1| hypothetical protein Sala_3150 [Sphingopyxis alaskensis RB2256]
gi|98978702|gb|ABF54853.1| protein of unknown function DUF1321 [Sphingopyxis alaskensis
RB2256]
Length = 160
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 72/161 (44%), Positives = 97/161 (60%), Gaps = 6/161 (3%)
Query: 25 MNYD----HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNL 80
M+ D I YD + ++ALR +V VLS+V SLPGEHHFYITF T A GV I +L
Sbjct: 1 MSDDVRDSLIPYDEIVQDALRAVVGRVLSQVEGTDSLPGEHHFYITFKTQAPGVDIPAHL 60
Query: 81 RKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
+P++MTIV+QN+FWDL V ++HF VGLSF+ P L+IP+ AI F DPSV+F L+F
Sbjct: 61 VAKFPDEMTIVLQNRFWDLTVEEDHFSVGLSFNQTPSTLIIPYAAITAFVDPSVDFGLQF 120
Query: 141 DVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKK 181
V + E P+ ++ +N V+ D KK
Sbjct: 121 QVSDDGAAEPEPHDEADN--DRPEVSTEDGSNVVTVDFGKK 159
>gi|294011543|ref|YP_003545003.1| hypothetical protein SJA_C1-15570 [Sphingobium japonicum UT26S]
gi|292674873|dbj|BAI96391.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 158
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 70/158 (44%), Positives = 94/158 (59%), Gaps = 4/158 (2%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
+ I YD + +EALR +V VL E+ G LPG HHFYITF T A GV I ++L + +
Sbjct: 5 LPDSLIPYDEIVQEALRAVVGRVLGEIERSGGLPGAHHFYITFKTQAAGVDIPRHLVERF 64
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+QN+FWDLKV D+ F V L+F+ V L IPF AI F DP+VNF L+F
Sbjct: 65 PDEMTIVLQNKFWDLKVSDDAFGVSLTFNQVAAHLHIPFAAITAFVDPAVNFALQFQAQA 124
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
+ E E +P ++ +N V+ D KKK
Sbjct: 125 DIAPEPHEEAEN----DAPQVMTEDGSNVVTVDFGKKK 158
>gi|119384644|ref|YP_915700.1| hypothetical protein Pden_1909 [Paracoccus denitrificans PD1222]
gi|119374411|gb|ABL70004.1| protein of unknown function DUF1321 [Paracoccus denitrificans
PD1222]
Length = 153
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 64/174 (36%), Positives = 87/174 (50%), Gaps = 25/174 (14%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y + A++ L+ VL VA G LPGEHHF+ITF T V ++ LR+ YPE+MT
Sbjct: 5 IDYGGMMHRAMQRLIAEVLETVAEEG-LPGEHHFFITFDTRDSDVEMADWLRERYPEEMT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IVIQ+ F +L V F + L+F N PE L IPF+A++ F DPSV F L F+ H E +E
Sbjct: 64 IVIQHWFENLSVTPEGFHITLNFGNSPEPLYIPFDALRTFVDPSVEFGLRFENHEEDEDE 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + + A V+SLD +RK
Sbjct: 124 PEAEEDEPQEP------------------------GEDGPKGSAEVVSLDKWRK 153
>gi|304321360|ref|YP_003855003.1| hypothetical protein PB2503_09039 [Parvularcula bermudensis
HTCC2503]
gi|303300262|gb|ADM09861.1| hypothetical protein PB2503_09039 [Parvularcula bermudensis
HTCC2503]
Length = 186
Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats.
Identities = 75/186 (40%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
Query: 25 MNYD--HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRK 82
M D + Y L ALR +V+ VLS ++G PGEHHFYI F TNA+GV +S LR+
Sbjct: 1 MADDDSELDYTFLELAALRNVVRDVLSITETLGHPPGEHHFYIGFLTNAKGVEMSDTLRE 60
Query: 83 NYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV 142
YPE+M IV+Q+QF L+V + FEV L F VP+RL+IPF+AI F DPSVN+ +F V
Sbjct: 61 QYPERMVIVLQHQFEGLRVYADRFEVTLHFKGVPDRLIIPFDAIAEFADPSVNYSRQFPV 120
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSV----SQDSSKKKSTKKQNKNKMASVISL 198
IE + E T + P +++ + D ++ A ++S+
Sbjct: 121 AIEVLGETDTAAPTVQGSVEPFTPRGDKSRPAHRDDNDDDGPDDDGPSGPQSGSADIVSI 180
Query: 199 DNFRKK 204
D FRKK
Sbjct: 181 DRFRKK 186
>gi|307294377|ref|ZP_07574221.1| hypothetical protein SphchDRAFT_1847 [Sphingobium chlorophenolicum
L-1]
gi|306880528|gb|EFN11745.1| hypothetical protein SphchDRAFT_1847 [Sphingobium chlorophenolicum
L-1]
Length = 158
Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats.
Identities = 69/158 (43%), Positives = 95/158 (60%), Gaps = 4/158 (2%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
+ I YD + +EALR +V VL E+ G LPG HHFYITF T A GV I ++L + +
Sbjct: 5 LPDSLIPYDEIVQEALRAVVGRVLGEIERSGGLPGVHHFYITFKTQAVGVDIPRHLVERF 64
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+QN+FWDLKV ++ F V L+F+ V L IPF AI F DP+VNF L+F
Sbjct: 65 PDEMTIVLQNKFWDLKVSEDAFGVSLTFNQVAAHLHIPFAAITAFVDPAVNFALQFQAQA 124
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
+ E E +P +++ +N V+ D KKK
Sbjct: 125 DIAPEPHEEAEN----DAPQVTNEDGSNVVTVDFGKKK 158
>gi|85710735|ref|ZP_01041799.1| hypothetical protein NAP1_09997 [Erythrobacter sp. NAP1]
gi|85687913|gb|EAQ27918.1| hypothetical protein NAP1_09997 [Erythrobacter sp. NAP1]
Length = 166
Score = 194 bits (492), Expect = 8e-48, Method: Composition-based stats.
Identities = 68/180 (37%), Positives = 98/180 (54%), Gaps = 20/180 (11%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGS-LPGEHHFYITFATNARGVRISQNLRKNY 84
I YD + +EALR +V VL E+ GS LPG HHFYITF T A GV I +LR+ +
Sbjct: 6 PDSLIPYDEIVQEALRAVVGRVLGEIERGGSELPGNHHFYITFKTGASGVSIPAHLRERF 65
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+QN+FWDL+V ++ F VGLSF+ +P +L IPF AI F DP+V+F L+F +
Sbjct: 66 PDEMTIVLQNKFWDLEVREDGFTVGLSFNQIPAKLEIPFAAITAFVDPAVDFGLQFQASV 125
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ + D+ + ++V+++D RKK
Sbjct: 126 SEL-------------------APEEHEDAENDAEVLVQGDPDDGGDGSNVVTVDFGRKK 166
>gi|16126341|ref|NP_420905.1| hypothetical protein CC_2102 [Caulobacter crescentus CB15]
gi|221235124|ref|YP_002517560.1| hypothetical protein CCNA_02187 [Caulobacter crescentus NA1000]
gi|13423587|gb|AAK24073.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220964296|gb|ACL95652.1| hypothetical protein CCNA_02187 [Caulobacter crescentus NA1000]
Length = 162
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 65/185 (35%), Positives = 94/185 (50%), Gaps = 23/185 (12%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQN 79
T D ++Y+ +A++ALRG+VK L + A+ G LP HH YITF T A GV Q+
Sbjct: 1 MSQTEPPEDLMQYEAMAQDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQD 60
Query: 80 LRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
L YP++MTIV+Q+Q+WDL + F V L F P+RL +P+ A+ FYDPSV F L+
Sbjct: 61 LLSKYPDEMTIVLQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAALTRFYDPSVQFALQ 120
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
F +E K+ + + ++ ++SLD
Sbjct: 121 FSAPEIIEDEPEPDPEPED-----------------------KANQGASGDEGPKIVSLD 157
Query: 200 NFRKK 204
FRKK
Sbjct: 158 QFRKK 162
>gi|149202503|ref|ZP_01879475.1| hypothetical protein RTM1035_07799 [Roseovarius sp. TM1035]
gi|149143785|gb|EDM31819.1| hypothetical protein RTM1035_07799 [Roseovarius sp. TM1035]
Length = 141
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 27/168 (16%)
Query: 36 AKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQ 95
A+RGL++ VLS+V + G LPG HHF+ITF T +++ L++ YP +MT+V+Q+
Sbjct: 1 MHRAMRGLIQEVLSKVQAEG-LPGAHHFFITFDTKHPEAKLADWLKQRYPSEMTVVMQHW 59
Query: 96 FWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGN 155
+ DLKV ++ F V L+F + PERL +P+++I+ F DPSV F L F+ +
Sbjct: 60 YDDLKVTNDGFGVTLNFGDAPERLYVPYDSIQTFVDPSVEFGLRFETQEVDDDIDELDDT 119
Query: 156 TGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
A V+ LD+FRK
Sbjct: 120 DPPDDDP--------------------------SPGKAEVVRLDSFRK 141
>gi|83858887|ref|ZP_00952409.1| hypothetical protein OA2633_05271 [Oceanicaulis alexandrii
HTCC2633]
gi|83853710|gb|EAP91562.1| hypothetical protein OA2633_05271 [Oceanicaulis alexandrii
HTCC2633]
Length = 152
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 66/179 (36%), Positives = 93/179 (51%), Gaps = 31/179 (17%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
D ++Y+ LA+EALR +V+ L A G LPG HHFYITF T+ G I ++L YP
Sbjct: 4 AKDLMQYEQLAQEALRDVVRKSLERAAGDG-LPGAHHFYITFRTSDPGCDIDESLASAYP 62
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
E+MTIV+++QFWDL+V D FEV L F VP+ L +P+ A+ F+DPSV F L FD
Sbjct: 63 EEMTIVLEHQFWDLEVDDAGFEVTLKFGGVPKYLKVPWRAVTRFHDPSVGFRLHFDYAAP 122
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
++ G+ ++ +V+SL+ FR K
Sbjct: 123 SPDDTPGQGD------------------------------GDDQVNEGTVVSLEAFRNK 151
>gi|58039869|ref|YP_191833.1| hypothetical protein GOX1426 [Gluconobacter oxydans 621H]
gi|58002283|gb|AAW61177.1| Hypothetical protein GOX1426 [Gluconobacter oxydans 621H]
Length = 191
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 67/185 (36%), Positives = 92/185 (49%), Gaps = 11/185 (5%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
+ + + YD ++A R ++ + VA+ G LPG HHFY+TF TN V I LR
Sbjct: 13 EHELPESLLPYDDWVEDAYREVMLRAIEHVAAEG-LPGAHHFYLTFRTNRPDVIIPARLR 71
Query: 82 KNYPEKMTIVIQNQFWDLKVLDNH--FEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
YPE+MTIV+Q+QFWDL + VGLSF V L IP NAI F DP + L
Sbjct: 72 AQYPEEMTIVLQHQFWDLALDREKNVISVGLSFGGVGSILCIPVNAITAFADPHIRMALR 131
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
F +E +E + PD+ D V ++T ++ K A V+SL
Sbjct: 132 FSHSPLEEDEDVE---IPEGAVEPDDIDPAHHPEVQ-----PETTSSEDVKKDAEVVSLA 183
Query: 200 NFRKK 204
FRK+
Sbjct: 184 AFRKR 188
>gi|294084291|ref|YP_003551049.1| hypothetical protein SAR116_0722 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292663864|gb|ADE38965.1| hypothetical protein SAR116_0722 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 163
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 57/175 (32%), Positives = 93/175 (53%), Gaps = 24/175 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
+ Y++L ++ALR +V+ L +A LPG+ HFYI+F T+ GV ++ +L+ +P+ MT
Sbjct: 11 LNYELLVEDALRSVVRGSLL-IAQKAGLPGDTHFYISFKTDYPGVELADDLKIKHPDIMT 69
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q+Q+ DL+V D+ F V L F P +++PF ++ GF DPSV F L+F
Sbjct: 70 IVLQHQYADLEVDDDSFSVTLFFGGKPSPMIVPFASVTGFNDPSVGFGLQF--------- 120
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
D++ + D S + + + A V+SLD FR +
Sbjct: 121 --------------GTLDEDNEDLGDSDQSSPDAKAENGEETTADVVSLDTFRNR 161
>gi|296114517|ref|ZP_06833170.1| hypothetical protein GXY_02026 [Gluconacetobacter hansenii ATCC
23769]
gi|295978873|gb|EFG85598.1| hypothetical protein GXY_02026 [Gluconacetobacter hansenii ATCC
23769]
Length = 205
Score = 183 bits (466), Expect = 9e-45, Method: Composition-based stats.
Identities = 60/191 (31%), Positives = 89/191 (46%), Gaps = 10/191 (5%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
+T + + YD ++A R ++ V + G LPG+HHFY+TF T+ GV + + +R
Sbjct: 12 ETSIPDSLLPYDDWIEDAYRDVMLRAFEYVVTEGGLPGDHHFYLTFRTDWPGVEMPERVR 71
Query: 82 KNYPEKMTIVIQNQFWDLKVL--DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
YP ++TIV+Q+QF LKV V L+F VP LVIP AI F DPSV L
Sbjct: 72 AQYPHEITIVLQHQFHGLKVDRAAGTISVSLAFGGVPATLVIPVAAISAFADPSVKLPLS 131
Query: 140 FDVHIEHIEEKLEG------GNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
F V + G ++ +QD++ + + Q
Sbjct: 132 FRVPEHPPQPAPSAEIHNVFGQGQGQGPRAPQPEQEAHAPGAQDATPTSAEETQPS--SP 189
Query: 194 SVISLDNFRKK 204
V+SL FRK+
Sbjct: 190 QVVSLAAFRKR 200
>gi|162146691|ref|YP_001601150.1| hypothetical protein GDI_0869 [Gluconacetobacter diazotrophicus PAl
5]
gi|161785266|emb|CAP54812.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 181
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 62/185 (33%), Positives = 84/185 (45%), Gaps = 22/185 (11%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
D + + YD ++A R ++ L V G LP HHFYIT+ TN GV + LR
Sbjct: 12 DAAIPDSLLPYDSWIEDAYRTVMLRALELVGREG-LPEGHHFYITYLTNWPGVELPARLR 70
Query: 82 KNYPEKMTIVIQNQFWDLKVLDNH--FEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
YP ++TIV+Q+QFWDLKV + VGLSF V LVIP +AI F DP + L
Sbjct: 71 AQYPHEITIVLQHQFWDLKVDEASRTVSVGLSFGGVGSTLVIPIDAITAFADPHIRLALR 130
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
F E++ G T+ + + + V+SL
Sbjct: 131 FTPPELASEDEEPDGAEAPDAAP-------------------ADTEARAEESSSQVVSLA 171
Query: 200 NFRKK 204
FRKK
Sbjct: 172 AFRKK 176
>gi|329113258|ref|ZP_08242041.1| Hypothetical protein APO_0022 [Acetobacter pomorum DM001]
gi|326697399|gb|EGE49057.1| Hypothetical protein APO_0022 [Acetobacter pomorum DM001]
Length = 178
Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats.
Identities = 67/182 (36%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
+ Y+ +A R ++ L V+ G L GEHHFY+TF T+ GV I LR Y
Sbjct: 15 PATSLLPYERWLNDASRSVMLNALEHVSREG-LAGEHHFYLTFLTDFPGVDIPARLRAQY 73
Query: 85 PEKMTIVIQNQFWDLKVL--DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV 142
P +MTIV+Q+QFWDLKV VGLSF V LVIP AI GF DP+V F L F
Sbjct: 74 PHEMTIVLQHQFWDLKVDRAAKTVSVGLSFGGVGSILVIPVQAITGFADPAVRFSLHFAA 133
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
E E TG+ + + + + + V+SLD FR
Sbjct: 134 MEPTEEPTPEEPTTGQ----------------------PEPDRPEESDSSSQVVSLDAFR 171
Query: 203 KK 204
KK
Sbjct: 172 KK 173
>gi|148260339|ref|YP_001234466.1| hypothetical protein Acry_1336 [Acidiphilium cryptum JF-5]
gi|326403530|ref|YP_004283612.1| hypothetical protein ACMV_13830 [Acidiphilium multivorum AIU301]
gi|146402020|gb|ABQ30547.1| protein of unknown function DUF1321 [Acidiphilium cryptum JF-5]
gi|325050392|dbj|BAJ80730.1| hypothetical protein ACMV_13830 [Acidiphilium multivorum AIU301]
Length = 169
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 86/185 (46%), Gaps = 28/185 (15%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
DT + + YD ++ALR +V L + G +PGEHHFYITFAT GV + LR
Sbjct: 6 DTPIPESLLPYDEWTEDALRLVVLRALDHASREG-MPGEHHFYITFATAHPGVIMPDRLR 64
Query: 82 KNYPEKMTIVIQNQFWDLKVLDN--HFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
YP++MTIV+Q+Q+ DL V F V LSF VP L IP +AI F DP+V F L+
Sbjct: 65 AQYPDEMTIVLQHQYRDLSVDAEAQRFSVRLSFGGVPATLDIPLDAITAFADPAVRFGLQ 124
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
F + E+ P+ V+SLD
Sbjct: 125 FAARVPEAPEEAPAAAPEPAPPPPEQGPAE-------------------------VVSLD 159
Query: 200 NFRKK 204
FR++
Sbjct: 160 AFRRR 164
>gi|158429803|pdb|2QAS|A Chain A, Crystal Structure Of Caulobacter Crescentus Sspb Ortholog
Length = 157
Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 82/151 (54%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQN 79
T D ++Y+ +A++ALRG+VK L + A+ G LP HH YITF T A GV Q+
Sbjct: 4 MSQTEPPEDLMQYEAMAQDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQD 63
Query: 80 LRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
L YP++MTIV+Q+Q+WDL + F V L F P+RL +P+ A+ FYDPSV F L+
Sbjct: 64 LLSKYPDEMTIVLQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAALTRFYDPSVQFALQ 123
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQ 170
F +E + D+
Sbjct: 124 FSAPEIIEDEPEPDPEPEDKANQGASGDEGP 154
>gi|209543319|ref|YP_002275548.1| hypothetical protein Gdia_1150 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209530996|gb|ACI50933.1| protein of unknown function DUF1321 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 181
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 61/185 (32%), Positives = 83/185 (44%), Gaps = 22/185 (11%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
D + + YD ++A R ++ L V G LP HHFYIT+ TN GV + LR
Sbjct: 12 DAAIPDSLLPYDSWIEDAYRTVMLRALELVGREG-LPEGHHFYITYLTNWPGVELPARLR 70
Query: 82 KNYPEKMTIVIQNQFWDLKVLDNH--FEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
Y ++TIV+Q+QFWDLKV + VGLSF V LVIP +AI F DP + L
Sbjct: 71 AQYLHEITIVLQHQFWDLKVDEASRTVSVGLSFGGVGSTLVIPIDAITAFADPHIRLALR 130
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
F E++ G T+ + + + V+SL
Sbjct: 131 FTPPELASEDEEPDGAEAPDAAP-------------------ADTEARAEESSSQVVSLA 171
Query: 200 NFRKK 204
FRKK
Sbjct: 172 AFRKK 176
>gi|158429805|pdb|2QAZ|A Chain A, Structure Of C. Crescentus Sspb Ortholog
gi|158429806|pdb|2QAZ|B Chain B, Structure Of C. Crescentus Sspb Ortholog
gi|158429807|pdb|2QAZ|C Chain C, Structure Of C. Crescentus Sspb Ortholog
gi|158429808|pdb|2QAZ|D Chain D, Structure Of C. Crescentus Sspb Ortholog
Length = 128
Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 56/125 (44%), Positives = 77/125 (61%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQN 79
T D ++Y+ +A++ALRG+VK L + A+ G LP HH YITF T A GV Q+
Sbjct: 4 MSQTEPPEDLMQYEAMAQDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQD 63
Query: 80 LRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
L YP++MTIV+Q+Q+WDL + F V L F P+RL +P+ A+ FYDPSV F L+
Sbjct: 64 LLSKYPDEMTIVLQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAALTRFYDPSVQFALQ 123
Query: 140 FDVHI 144
F
Sbjct: 124 FSAPE 128
>gi|258543545|ref|YP_003188978.1| hypothetical protein APA01_24930 [Acetobacter pasteurianus IFO
3283-01]
gi|256634623|dbj|BAI00599.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256637679|dbj|BAI03648.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256640733|dbj|BAI06695.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256643788|dbj|BAI09743.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256646843|dbj|BAI12791.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256649896|dbj|BAI15837.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256652886|dbj|BAI18820.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655940|dbj|BAI21867.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 178
Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats.
Identities = 67/178 (37%), Positives = 85/178 (47%), Gaps = 25/178 (14%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+ Y+ EA R ++ L V+ G L GEHHFY+TF T+ GV I LR YP +M
Sbjct: 19 LLPYERWLNEASRSVMLNALEHVSREG-LAGEHHFYLTFLTDFPGVDIPARLRAQYPHEM 77
Query: 89 TIVIQNQFWDLKVL--DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEH 146
TIV+Q+QFWDLKV VGLSF V LVIP AI GF DP++ F L F
Sbjct: 78 TIVLQHQFWDLKVDRKAKTVSVGLSFGGVGSILVIPVQAITGFADPAIRFSLHFAAMEPT 137
Query: 147 IEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E E TG+ + + + + V+SLD FRKK
Sbjct: 138 EEPTPEEPTTGQ----------------------PEQDGPEESDSSSQVVSLDAFRKK 173
>gi|23008550|ref|ZP_00049949.1| COG3814: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 105
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 55/90 (61%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFYI+F T A GVR+SQ LR+ Y
Sbjct: 1 MAEDLIRYDLLVQDALRGVVRKVLTDAARDG-LSGEHHFYISFRTEAPGVRMSQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSN 114
P+ MTIV+Q+QFWDL V ++ FEVGLSFS
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHSFEVGLSFSG 89
>gi|296532841|ref|ZP_06895511.1| protein of hypothetical function DUF1321 [Roseomonas cervicalis
ATCC 49957]
gi|296266829|gb|EFH12784.1| protein of hypothetical function DUF1321 [Roseomonas cervicalis
ATCC 49957]
Length = 148
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 54/121 (44%), Positives = 69/121 (57%), Gaps = 3/121 (2%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
+T + YD ++A+R + L G LPGEHHFY+TF T+ G+ I +L+
Sbjct: 4 ETRQAESLLPYDRWTEDAMREVALRALEHAGEHG-LPGEHHFYLTFRTDRPGIAIPSHLK 62
Query: 82 KNYPEKMTIVIQNQFWDLKVLDNH--FEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
YPE+MTIV+Q+QFWDLKV GLSF VP LVIP AI F+DP V L
Sbjct: 63 ARYPEEMTIVLQHQFWDLKVDRQAGLVSAGLSFGGVPATLVIPIAAITAFWDPHVRVGLR 122
Query: 140 F 140
F
Sbjct: 123 F 123
>gi|148284854|ref|YP_001248944.1| hypothetical protein OTBS_1581 [Orientia tsutsugamushi str.
Boryong]
gi|146740293|emb|CAM80674.1| conserved hypothetical protein [Orientia tsutsugamushi str.
Boryong]
Length = 175
Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 96/176 (54%), Gaps = 4/176 (2%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I Y+ L +++ +VK L ++ +L +++FYI+F T GV+IS++LR Y E+M
Sbjct: 3 KINYEELIDQSMLNVVKQALKFASTACNL-EDNYFYISFCTIFPGVKISEHLRVKYVEQM 61
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIV+Q+QF DL + + F V LSFS E++V+P+ +I F DP ++ ++ +
Sbjct: 62 TIVLQHQFSDLVIESDFFSVCLSFSGKIEKIVVPWKSIIMFIDPEAQLRIKLFYYVNKYK 121
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
++L V S + + + K K+ K NK V+SLD+FRKK
Sbjct: 122 QQLYKNVDSIVEDSSKENKNQYCDQLVATNEKLKNMKDIVGNK---VVSLDSFRKK 174
>gi|189184158|ref|YP_001937943.1| hypothetical protein OTT_1251 [Orientia tsutsugamushi str. Ikeda]
gi|189180929|dbj|BAG40709.1| hypothetical protein OTT_1251 [Orientia tsutsugamushi str. Ikeda]
Length = 175
Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats.
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 4/176 (2%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I Y+ L +++ +VK L + AS +++FYI+F T GV+IS++LR Y E+M
Sbjct: 3 KINYEELIDQSMLNVVKQAL-KFASTNCNFEDNYFYISFCTTFPGVKISEHLRVKYLEQM 61
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIV+Q+QF DL + + F V LSFS E++V+P+ +I F DP ++ ++ +
Sbjct: 62 TIVLQHQFSDLVIESDFFSVCLSFSGKIEKIVVPWKSIIMFIDPEAQLRIKLFYYVNKYK 121
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
++L G V S + + + K K+ K NK V+SLD+FRKK
Sbjct: 122 QQLYKNVDGIVEDSNKENKNQYCDQLVATNEKLKNMKDIVGNK---VVSLDSFRKK 174
>gi|222475080|ref|YP_002563495.1| hypothetical protein AMF_374 [Anaplasma marginale str. Florida]
gi|222419216|gb|ACM49239.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 183
Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 52/184 (28%), Positives = 77/184 (41%), Gaps = 22/184 (11%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQN 79
W + M+ D + Y L A+ +V+ L V+ + S GE H I+F T GV +
Sbjct: 21 WCEVSMS-DLVDYRRLVYAAMCSVVREALDFVSKLPS-TGEVHVTISFLTGCSGVVLPDY 78
Query: 80 LRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
LR YPE MTIV+Q QF +L V DN+F V LSF E + +PF A+ + D NF L+
Sbjct: 79 LRAQYPENMTIVLQYQFRELCVSDNYFRVILSFKGKEECITVPFRAVVKYVDMLANFSLD 138
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
+ + + + P ++I +D
Sbjct: 139 LEQYGNLEFGMDGDSDNDDIAECPPT--------------------DTAHTVRDNIIFID 178
Query: 200 NFRK 203
F K
Sbjct: 179 KFLK 182
>gi|73666951|ref|YP_302967.1| hypothetical protein Ecaj_0325 [Ehrlichia canis str. Jake]
gi|72394092|gb|AAZ68369.1| conserved hypothetical protein [Ehrlichia canis str. Jake]
Length = 157
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 22/175 (12%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+ +VK L+ +A H I+F TN +GV + ++++NYP+++T
Sbjct: 5 IDYQKLMHSAMCTVVKNALTVIAHSEHST-NVHIAISFLTNYKGVTLPDHIKENYPQEIT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+++Q+QF L+V DN V LSF E +VIPF++I + D F L+ + ++ + E
Sbjct: 64 VILQHQFRSLQVFDNSISVILSFRGQEETVVIPFHSIIKYIDVYQGFVLDLEQYMSNNIE 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ + + + K+ + +N ++I +D F KK
Sbjct: 124 EADNYDY---------------------DTDDKNEESDQQNNQDNIIFIDTFLKK 157
>gi|56416714|ref|YP_153788.1| hypothetical protein AM504 [Anaplasma marginale str. St. Maries]
gi|254994922|ref|ZP_05277112.1| hypothetical protein AmarM_02277 [Anaplasma marginale str.
Mississippi]
gi|255003058|ref|ZP_05278022.1| hypothetical protein AmarPR_02000 [Anaplasma marginale str. Puerto
Rico]
gi|255004181|ref|ZP_05278982.1| hypothetical protein AmarV_02212 [Anaplasma marginale str.
Virginia]
gi|56387946|gb|AAV86533.1| hypothetical protein AM504 [Anaplasma marginale str. St. Maries]
Length = 158
Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 21/176 (11%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D + Y L A+ +V+ L V+ + S GE H I+F T GV + LR YPE
Sbjct: 3 DLVDYRRLVYAAMCSVVREALDFVSKLPS-TGEVHVTISFLTGCSGVVLPDYLRAQYPEN 61
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
MTIV+Q QF +L V DN+F V LSF E + +PF A+ + D NF L+ + +
Sbjct: 62 MTIVLQYQFRELCVSDNYFRVILSFKGKEECITVPFRAVVKYVDMLANFSLDLEQYGNLE 121
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + P ++I +D F K
Sbjct: 122 FGMDGDSDNDDIAECPPT--------------------DTAHTVRDNIIFIDKFLK 157
>gi|229587083|ref|YP_002845584.1| hypothetical protein RAF_ORF1017 [Rickettsia africae ESF-5]
gi|228022133|gb|ACP53841.1| Unknown [Rickettsia africae ESF-5]
Length = 158
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 23/174 (13%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++
Sbjct: 2 NIEYKKFVHEYMLEFVKKILTKIQ-HENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQI 60
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIV+Q QF +L V D F + +SF+ V E + +PF+A+ F D + N+ L F+ + E
Sbjct: 61 TIVLQYQFENLIVNDTGFSLTVSFNGVKEIIYVPFDALISFVDSNNNYNLTFNQSLNIHE 120
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ S KS + + + +VI LD FR
Sbjct: 121 NPQH----------------------EEAISNNKSDQTSSSSSSPNVIMLDKFR 152
>gi|58617072|ref|YP_196271.1| hypothetical protein ERGA_CDS_03450 [Ehrlichia ruminantium str.
Gardel]
gi|58416684|emb|CAI27797.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
Length = 153
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 26/175 (14%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
+ Y L A+ ++K L+ +A H I+F T +GV + +++ +YP ++T
Sbjct: 5 VNYQKLMHSAMCKVIKDALTVIAKPEY-CNSIHVVISFLTQHKGVILPDHVKNSYPNEIT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q+QF L + DNH V LSF+ E + I + +I + D F L+ +I I +
Sbjct: 64 IVLQHQFRHLCIHDNHISVVLSFNGKEEAVTITYCSITKYVDAYQGFSLDLKPYINSIIK 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ + N + S K N ++I +D F KK
Sbjct: 124 EEDNNN-------------------------EDSLKDDKNNTQDNIIFIDTFLKK 153
>gi|57239070|ref|YP_180206.1| hypothetical protein Erum3420 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579013|ref|YP_197225.1| hypothetical protein ERWE_CDS_03490 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161149|emb|CAH58062.1| conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
gi|58417639|emb|CAI26843.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 153
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 26/175 (14%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
+ Y L A+ ++K L+ +A H I+F T +GV + +++ +YP ++T
Sbjct: 5 VNYQKLMHSAMCKVIKDALTVIAKPEY-CNSIHVVISFLTQHKGVILPDHVKNSYPNEIT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q+QF L + DNH V LSF+ E + I + +I + D F L+ +I I +
Sbjct: 64 IVLQHQFRHLCIHDNHISVVLSFNGKEEAVTITYCSITKYVDAYQGFSLDLKPYINSIIK 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ + + + K+ N ++I +D F KK
Sbjct: 124 EEDNNS-------------------------EDCPKEDKNNSQDNIIFIDTFLKK 153
>gi|269958868|ref|YP_003328657.1| hypothetical protein ACIS_00801 [Anaplasma centrale str. Israel]
gi|269848699|gb|ACZ49343.1| hypothetical protein ACIS_00801 [Anaplasma centrale str. Israel]
Length = 158
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 74/176 (42%), Gaps = 21/176 (11%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D + Y L A+ +V+ L V+ + S GE H I+F TN GV + LR YPE
Sbjct: 3 DLVDYRRLVYAAMCSVVREALDFVSKL-SPTGEVHITISFLTNYSGVVLPDYLRAQYPEN 61
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
MTIV+Q QF +L V D+ F V LSF E + +PF A+ + D NF L+ + + +
Sbjct: 62 MTIVLQYQFRELCVSDSSFRVILSFKGKEECITVPFRAVVKYVDMLANFSLDLEQYGDIE 121
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ V P ++I +D F K
Sbjct: 122 FGMDADSDNDDVAGYPST--------------------DTAHTVRDNIIFIDKFLK 157
>gi|51473898|ref|YP_067655.1| hypothetical protein RT0714 [Rickettsia typhi str. Wilmington]
gi|51460210|gb|AAU04173.1| rickettsial conserved hypothetical protein [Rickettsia typhi str.
Wilmington]
Length = 159
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 24/174 (13%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+K+
Sbjct: 2 NIEYKKFVNEYMLEFVKKILTKIQ-YENLYWDQLIYISYRTDNPAVILPSKVKQAYPKKI 60
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIV+Q QF +L V DN F + +SF V E + IPF+A+ F D + N+ L F+ + E
Sbjct: 61 TIVLQYQFENLIVKDNGFSLTVSFDGVKEIIYIPFDALISFVDSNNNYSLTFNQSLNIQE 120
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
P ++K ++S + S K S +VI LD FR
Sbjct: 121 --------------PQQYEK----AISNNKSYKTSLSSNP-----NVIMLDKFR 151
>gi|34581280|ref|ZP_00142760.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262665|gb|EAA26169.1| unknown [Rickettsia sibirica 246]
Length = 157
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 24/174 (13%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++
Sbjct: 2 NIEYKKFVHEYMLEFVKKILTKIQ-HENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQI 60
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+ + E
Sbjct: 61 TIVLQYQFENLIVNDTGFSLTVSFDGVKEIIYVPFDALISFVDSNNNYSLTFNQSLNIHE 120
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ ++S + S + + + +VI LD FR
Sbjct: 121 ------------------NPQHEEAISNNKS-----DQTSSSSSPNVIMLDKFR 151
>gi|239947174|ref|ZP_04698927.1| dephospho-CoA kinase [Rickettsia endosymbiont of Ixodes scapularis]
gi|239921450|gb|EER21474.1| dephospho-CoA kinase [Rickettsia endosymbiont of Ixodes scapularis]
Length = 159
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 24/174 (13%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E + VK +L+++ +L + YI++ T V + +++ YP+++
Sbjct: 2 NIEYKKFVNEYMLEFVKKILTKIQ-HENLYWDQLIYISYRTYNPAVILPSKVKQAYPKQI 60
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIV+Q QF +L V D F + +SF +V E + +PF+A+ F D + N+ L F+ + E
Sbjct: 61 TIVLQYQFENLIVNDTGFSLTVSFDDVKEIIYVPFDALISFVDSNNNYSLTFNQPLNIQE 120
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ +S + S + S+ +VI LD FR
Sbjct: 121 ------------------NPQHEEEISNNKSYQTSSSSNP-----NVIMLDKFR 151
>gi|88658634|ref|YP_507543.1| hypothetical protein ECH_0744 [Ehrlichia chaffeensis str. Arkansas]
gi|88600091|gb|ABD45560.1| conserved hypothetical protein [Ehrlichia chaffeensis str.
Arkansas]
Length = 157
Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 22/175 (12%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L A+ +VK L+ VA H I+F T+ +GV + ++++ NYP+++T
Sbjct: 5 IDYQKLMHAAMCSVVKNALTVVAQSEHFY-NVHIAISFLTHYKGVTLPEHVKNNYPQEIT 63
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+++Q+QF L+V DN V LSF E +VIP+ +I + D F L+F+ + E
Sbjct: 64 VILQHQFRSLQVFDNSASVVLSFRGKEETVVIPYQSIIKYIDVYQGFVLDFEQYTNSDIE 123
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ + + + + K K ++I +D F KK
Sbjct: 124 EFDDCDHDIDDS---------------------NEDKSQKGNQDNIIFIDTFLKK 157
>gi|67458571|ref|YP_246195.1| hypothetical protein RF_0179 [Rickettsia felis URRWXCal2]
gi|67004104|gb|AAY61030.1| unknown [Rickettsia felis URRWXCal2]
Length = 178
Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 24/174 (13%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E + VK +L+++ + +L + YI++ T+ V + +++ YP+++
Sbjct: 21 NIEYKKFVNEYMLEFVKKILTKIQ-LENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQI 79
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+ + E
Sbjct: 80 TIVLQYQFENLIVNDTGFSLTVSFDGVKEIIYVPFDALISFVDSNNNYSLTFNQSLNIQE 139
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ +S + S K S +VI LD FR
Sbjct: 140 ------------------NHQHEEEISSNKSYKTSLSPNP-----NVIMLDKFR 170
>gi|238650385|ref|YP_002916237.1| hypothetical protein RPR_01460 [Rickettsia peacockii str. Rustic]
gi|238624483|gb|ACR47189.1| hypothetical protein RPR_01460 [Rickettsia peacockii str. Rustic]
Length = 157
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 24/174 (13%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++
Sbjct: 2 NIEYKKFVHEYMLEFVKKILTKIQ-HENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQI 60
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+ + E
Sbjct: 61 TIVLQYQFENLIVNDTGFSLTVSFDGVKEIIYVPFDALISFVDSNNNYNLTFNQSLNIHE 120
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ ++S + S + + + +VI LD FR
Sbjct: 121 ------------------NPQHEEAISNNKSYQ-----TSSSSSPNVIMLDKFR 151
>gi|157828954|ref|YP_001495196.1| hypothetical protein A1G_06150 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933679|ref|YP_001650468.1| hypothetical protein RrIowa_1322 [Rickettsia rickettsii str. Iowa]
gi|157801435|gb|ABV76688.1| hypothetical protein A1G_06150 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908766|gb|ABY73062.1| hypothetical protein RrIowa_1322 [Rickettsia rickettsii str. Iowa]
Length = 157
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 24/174 (13%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++
Sbjct: 2 NIEYKKFVHEYMLEFVKKILTKIQ-HENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQI 60
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F + E
Sbjct: 61 TIVLQYQFENLIVNDTGFSLTVSFDGVKEIIYVPFDALISFVDSNNNYSLTFSQSLNIHE 120
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ ++S + S + + + +VI LD FR
Sbjct: 121 ------------------NPQHEEAISNNKSYQ-----TSSSSSPNVIMLDKFR 151
>gi|15604564|ref|NP_221082.1| hypothetical protein RP727 [Rickettsia prowazekii str. Madrid E]
gi|3861259|emb|CAA15158.1| unknown [Rickettsia prowazekii]
gi|292572371|gb|ADE30286.1| hypothetical protein rpr22_CDS710 [Rickettsia prowazekii Rp22]
Length = 159
Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 24/174 (13%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++
Sbjct: 2 NIEYKKFVNEYMLEFVKKILTKIQ-HENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQI 60
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIV+Q QF +L V DN F + +SF V E + IPF+++ F D + N+ L F+ + E
Sbjct: 61 TIVLQYQFENLTVKDNGFSLTVSFDGVKEIIYIPFDSLISFVDSNNNYSLTFNQSLNIPE 120
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ +S + S K S +VI LD FR
Sbjct: 121 ------------------HQQYEKEISNNKSYKTSLSLNP-----NVIMLDKFR 151
>gi|15893032|ref|NP_360746.1| hypothetical protein RC1109 [Rickettsia conorii str. Malish 7]
gi|15620233|gb|AAL03647.1| unknown [Rickettsia conorii str. Malish 7]
Length = 157
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 24/174 (13%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++
Sbjct: 2 NIEYKKFVHEYMLEFVKKILTKIQ-HENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQI 60
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+ + E
Sbjct: 61 TIVLQYQFENLIVNDTGFSLTVSFDGVKEIIYVPFDALISFVDFNNNYSLTFNQSLNIHE 120
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ ++S + S + + + +VI LD FR
Sbjct: 121 ------------------NPQHEEAISNNKS-----DQTSSSSSPNVIMLDKFR 151
>gi|157826198|ref|YP_001493918.1| hypothetical protein A1C_05875 [Rickettsia akari str. Hartford]
gi|157800156|gb|ABV75410.1| hypothetical protein A1C_05875 [Rickettsia akari str. Hartford]
Length = 157
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 24/174 (13%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E + VK +L+++ +L + YI++ T++ V + ++++YP+++
Sbjct: 2 NIEYKKFVNEYMLEFVKKILTKIQ-HENLYWDQLIYISYKTDSPAVILPSKVKQSYPKQI 60
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+ + E
Sbjct: 61 TIVLQYQFENLIVHDTGFSLTVSFDGVKEIIYVPFDALISFVDFNNNYSLTFNQSLNIQE 120
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
++ ++ + S K S +VI LD FR
Sbjct: 121 ------------------NQQHEEEINTNKSYKTSLSPNQ-----NVIMLDKFR 151
>gi|157964870|ref|YP_001499694.1| hypothetical protein RMA_1146 [Rickettsia massiliae MTU5]
gi|157844646|gb|ABV85147.1| hypothetical protein RMA_1146 [Rickettsia massiliae MTU5]
Length = 170
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 24/174 (13%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++
Sbjct: 15 NIEYKKFVHEYMLEFVKKILTKIQ-HENLYWDQLIYISYRTDNPAVILPSKVKQAYPQQI 73
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE 148
TIV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+ + E
Sbjct: 74 TIVLQYQFENLIVNDTGFSLMVSFDGVKEIIYVPFDALISFVDSNNNYSLTFNHSLNIHE 133
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ +S + S + + + +VI LD FR
Sbjct: 134 ------------------NPQHEEEISNNKSYQ-----TSSSSSPNVIMLDKFR 164
>gi|254796819|ref|YP_003081656.1| hypothetical protein NRI_0436 [Neorickettsia risticii str.
Illinois]
gi|254590067|gb|ACT69429.1| conserved hypothetical protein [Neorickettsia risticii str.
Illinois]
Length = 153
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 79/147 (53%), Gaps = 7/147 (4%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
I+Y L A+ G+V+ V+ +V++ +F+ITF+T +S +L+K YP +M
Sbjct: 3 EIKYKALVNTAMLGVVRSVMKDVSAGE----AANFFITFSTR--NASLSDSLKKKYPCEM 56
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF-DVHIEHI 147
+I++QNQF +L+V F V LSFS V E + +PF++I F D NF LEF D+ E
Sbjct: 57 SIILQNQFRNLQVSYERFSVVLSFSGVEECITVPFSSILYFLDRECNFALEFHDLASEGS 116
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSV 174
++++ + G Q +
Sbjct: 117 VDEVDSCDAGGAYVPGTGTKGEQQGKI 143
>gi|254452768|ref|ZP_05066205.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198267174|gb|EDY91444.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 111
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 45/133 (33%), Positives = 61/133 (45%), Gaps = 23/133 (17%)
Query: 71 ARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V I+ L YP +MT+VIQ+Q+ LKV D+ F + LSF + PE L +P++AIK F
Sbjct: 2 HPDVEIADWLSDRYPGEMTVVIQHQYESLKVTDHGFSITLSFGDKPEPLYVPYDAIKTFV 61
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
DPSV F L F+ + E E +K
Sbjct: 62 DPSVEFGLRFEAQDDEDGETPEA-----------------------PMDVMAEPEKDAPK 98
Query: 191 KMASVISLDNFRK 203
K A ++SLD FRK
Sbjct: 99 KDADIVSLDQFRK 111
>gi|88607243|ref|YP_505354.1| hypothetical protein APH_0775 [Anaplasma phagocytophilum HZ]
gi|88598306|gb|ABD43776.1| conserved hypothetical protein [Anaplasma phagocytophilum HZ]
Length = 157
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 22/176 (12%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D + Y L A+ G+V+ +S + + S + H ++F TN GV + LR YPE
Sbjct: 3 DLVDYRKLVYSAMCGVVREAMSFFSKL-SPTRDVHVAVSFVTNCSGVVLPDYLRIQYPES 61
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
MTIV+Q QF +L V +N F V LSF E + +PF AI + D NF L+ + + +
Sbjct: 62 MTIVLQYQFRELNVSENGFSVVLSFRGKEELITVPFRAIVKYVDMISNFSLDLEQYGDIE 121
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E + L + ++I +D FRK
Sbjct: 122 LEMGMDSDNDDDLDEDIV---------------------SSHTTQDNIIFIDKFRK 156
>gi|88608394|ref|YP_506347.1| hypothetical protein NSE_0462 [Neorickettsia sennetsu str.
Miyayama]
gi|88600563|gb|ABD46031.1| conserved hypothetical protein [Neorickettsia sennetsu str.
Miyayama]
Length = 166
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 7/160 (4%)
Query: 16 FIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVR 75
+ ++ I+Y L A+ G+V+ V+ +V++ +F+ITF+T
Sbjct: 3 RPVNRTAPVLFMKEIKYKALVNAAMLGIVRSVMKDVSAGE----AANFFITFSTR--NTS 56
Query: 76 ISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVN 135
+S L+K YP +M+I++QNQF DL+V F V LSFS V E + +PF++I F D N
Sbjct: 57 LSDGLKKKYPREMSIILQNQFSDLQVSYEKFSVVLSFSGVEECITVPFSSILYFLDRECN 116
Query: 136 FELEF-DVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSV 174
F LEF D+ E ++++ N G N Q +
Sbjct: 117 FALEFHDLASEGSVDEVDFCNAGGAYVPGTNAKGEQQGKI 156
>gi|91205180|ref|YP_537535.1| hypothetical protein RBE_0365 [Rickettsia bellii RML369-C]
gi|157827483|ref|YP_001496547.1| hypothetical protein A1I_05950 [Rickettsia bellii OSU 85-389]
gi|91068724|gb|ABE04446.1| unknown [Rickettsia bellii RML369-C]
gi|157802787|gb|ABV79510.1| hypothetical protein A1I_05950 [Rickettsia bellii OSU 85-389]
Length = 169
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 19/175 (10%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKM 88
+I Y E++ VK VL+ + +L + YI++ T+ V + +R+ YP+++
Sbjct: 2 NIEYKKFLNESMLEFVKKVLARIQ-HENLYWDQLIYISYKTDHPAVILPLKVRQAYPKEI 60
Query: 89 TIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF-DVHIEHI 147
TIV+QNQF ++ V D F V LSFS + E + IPF+A+ F D S ++ F
Sbjct: 61 TIVLQNQFENIIVKDTGFSVMLSFSGIKETIYIPFDALISFVDSSNSYSFTFNQQLNIQN 120
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
E K + +N DK +S+ +VI LD FR
Sbjct: 121 NNTAEILKIEKQILEEENNDKIDEALLSK-----------------NVIMLDKFR 158
>gi|218661031|ref|ZP_03516961.1| hypothetical protein RetlI_16463 [Rhizobium etli IE4771]
Length = 126
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 51/83 (61%), Positives = 66/83 (79%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVATTGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFE 107
PE+MTIVIQ+QFW + + F
Sbjct: 61 PEQMTIVIQHQFWGPEDHRDAFR 83
>gi|157803405|ref|YP_001491954.1| dephospho-CoA kinase [Rickettsia canadensis str. McKiel]
gi|157784668|gb|ABV73169.1| dephospho-CoA kinase [Rickettsia canadensis str. McKiel]
Length = 159
Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 24/172 (13%)
Query: 31 RYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTI 90
Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++TI
Sbjct: 4 EYKKFVNEYMLEFVKKILTKIQ-HENLYWDQLIYISYRTDNPAVILPLKVKQAYPKQITI 62
Query: 91 VIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEK 150
V+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+ + E
Sbjct: 63 VLQYQFENLIVNDTGFSLTVSFYGVKEIIYVPFDALISFIDSNNNYSLTFNQLLNVQEYH 122
Query: 151 LEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ + K + + +VI LD FR
Sbjct: 123 QHEKEI-----------------------RNNKSCKTSLSPNPNVIMLDKFR 151
>gi|254462141|ref|ZP_05075557.1| conserved hypothetical protein [Rhodobacterales bacterium HTCC2083]
gi|206678730|gb|EDZ43217.1| conserved hypothetical protein [Rhodobacteraceae bacterium
HTCC2083]
Length = 117
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPS 133
++I+ LR+ YP +MT+V+Q+ F +L + D+ F + L+F + PE L IPF+A++ F DPS
Sbjct: 1 MQIADWLRERYPAEMTVVVQHWFDNLDIRDDGFSITLNFGDAPEPLNIPFDALRTFVDPS 60
Query: 134 VNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
V F L F+ P +Q ++ + ++ K A
Sbjct: 61 VEFGLRFEADE-------------DDEEEPALHSVDQEAPETEPAEIMLVDEEDAPKKDA 107
Query: 194 SVISLDNFRK 203
++SLD FRK
Sbjct: 108 EIVSLDAFRK 117
>gi|42520033|ref|NP_965948.1| hypothetical protein WD0128 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|99034650|ref|ZP_01314597.1| hypothetical protein Wendoof_01000587 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|225631130|ref|ZP_03787847.1| hypothetical protein WUni_002980 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|42409770|gb|AAS13882.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|225591172|gb|EEH12337.1| hypothetical protein WUni_002980 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 145
Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 77/176 (43%), Gaps = 35/176 (19%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
+ Y L A ++K L ++ G +P H I F T GV + L+K+YP +
Sbjct: 2 EQTDYKKLLNSAKFQVIKKTLDVISGNGFIP---HLEILFFTYFNGVTMPDRLKKSYPTQ 58
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
M I++Q+QF+DLKV ++ F V LSF ER+ IPF AI F D L FD
Sbjct: 59 MLIILQHQFYDLKVSEDKFSVSLSFQGKQERITIPFFAISEFRDKISGDVLIFD------ 112
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKK-KSTKKQNKNKMASVISLDNFR 202
+S DS K+ KS K K S+IS+D R
Sbjct: 113 -------------------------KISIDSDKEYKSEKCTEKLSNGSIISIDQLR 143
>gi|58584903|ref|YP_198476.1| hypothetical protein Wbm0646 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58419219|gb|AAW71234.1| Uncharacterized protein conserved in bacteria [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 145
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D I Y L A ++K L ++ P + I F T V IS LRK+YP +
Sbjct: 2 DKIGYKKLLNSAKFQVIKKALDVISGNSFTP---NLEILFFTYFNDVVISDYLRKSYPTQ 58
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV----- 142
M I++Q+QF+ L+V ++ F V LSF E++ +PF AI F+D L FD
Sbjct: 59 MLIILQHQFYGLEVFEDKFSVSLSFHGKQEQITVPFFAISEFHDKISGDVLIFDKINVDF 118
Query: 143 -HIEHIEEKLEGGNTGKVLTSPDNFD 167
E+ E + G +++ D
Sbjct: 119 DKEYKSEKCTENSSNGSIISIDQLHD 144
>gi|190570654|ref|YP_001975012.1| hypothetical protein WPa_0202 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019095|ref|ZP_03334902.1| hypothetical protein C1A_867 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190356926|emb|CAQ54310.1| Hypothetical protein WP0202 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995204|gb|EEB55845.1| hypothetical protein C1A_867 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 142
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 6/144 (4%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D Y A ++K L+ + P H I F T GV + L+++YP +
Sbjct: 2 DKTDYQKSLSYAKFQVIKKALNTILDNVFTP---HLEIVFFTRFNGVVMPDYLKESYPTQ 58
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE-- 145
M I++Q+QF+ LKVL++ F V LSF E++ +PF AI F+D L F V +
Sbjct: 59 MLIILQHQFFGLKVLEDKFSVSLSFRGKQEQVTVPFFAISEFHDKISGDTLVFSVDSDKE 118
Query: 146 -HIEEKLEGGNTGKVLTSPDNFDK 168
E+ E + G +++ +DK
Sbjct: 119 YESEKCAEKSSNGSIISIDQLYDK 142
>gi|68171241|ref|ZP_00544644.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Sapulpa]
gi|67999323|gb|EAM85969.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Sapulpa]
Length = 117
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 21/136 (15%)
Query: 69 TNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
T+ +GV + +++ NYP+++T+++Q+QF L+V DN V LSF E +VIP+ +I
Sbjct: 3 THYKGVTLPEHVNNNYPQEITVILQHQFRSLQVFDNSASVVLSFRGKEETVVIPYQSIIK 62
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQN 188
+ D F L+F+ + E+ + + + + K
Sbjct: 63 YIDVYQGFVLDFEQYTNSDIEEFDDCDHDIDDS---------------------NEDKSQ 101
Query: 189 KNKMASVISLDNFRKK 204
K ++I +D F KK
Sbjct: 102 KGNQDNIIFIDTFLKK 117
>gi|321472941|gb|EFX83910.1| hypothetical protein DAPPUDRAFT_239439 [Daphnia pulex]
Length = 273
Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYIT 66
I Y+ L +EA+RG+V+ +L EV+ +G L +HFY+T
Sbjct: 238 IDYEELVQEAMRGVVRRILQEVSKMG-LEDPNHFYVT 273
>gi|23009802|ref|ZP_00050715.1| COG0532: Translation initiation factor 2 (IF-2; GTPase)
[Magnetospirillum magnetotacticum MS-1]
Length = 104
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 153 GGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
G L + ++ + + SK ++ +K +++ A V+SLD FRKK
Sbjct: 52 GAKIVPALPAVGKPKQDDASEGAAGESKPEAAEKGDRDGTAEVVSLDAFRKK 103
>gi|149921704|ref|ZP_01910152.1| hypothetical protein PPSIR1_37534 [Plesiocystis pacifica SIR-1]
gi|149817442|gb|EDM76914.1| hypothetical protein PPSIR1_37534 [Plesiocystis pacifica SIR-1]
Length = 166
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 46/145 (31%), Gaps = 6/145 (4%)
Query: 44 VKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQF-WDLKVL 102
V+ V+ + + G P H GV ++R+ + E++ I + + DL
Sbjct: 5 VQSVIDSLYAAGRCPRLH-----VNATCEGVVCPDHIREQWQEELIIDLDASYPLDLTFA 59
Query: 103 DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTS 162
++ LSF R P+ AI D + + D ++ +
Sbjct: 60 EDGIGADLSFGGYVTRCTFPWEAIYVVADRATGRGIVLDQNMPDSVRHGRRQPEIIPMDE 119
Query: 163 PDNFDKNQTNSVSQDSSKKKSTKKQ 187
+ ++ + +
Sbjct: 120 ATTAALDGLLERRGATNPNATPAQD 144
>gi|162456885|ref|YP_001619252.1| hypothetical protein sce8602 [Sorangium cellulosum 'So ce 56']
gi|161167467|emb|CAN98772.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
cellulosum 'So ce 56']
Length = 242
Score = 45.3 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 40/138 (28%), Gaps = 16/138 (11%)
Query: 64 YITFATNARGVRISQNLRKNYPE-------KMTIVIQNQFWDLKVLDNHFEVGLSFSNVP 116
+I GV + + P+ M I I DLKV D+ LSF+ P
Sbjct: 26 FIHLDPRRPGVSVPKWFTGQ-PQLILQVGMNMAIAIP----DLKVDDDGISCTLSFNRAP 80
Query: 117 ERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQ 176
+P++AI V E I L + +P +
Sbjct: 81 FWCRLPWHAIWALVSEDQ----RGMVWPEDIPADLAAQKQQRPAVAPPQKPAKRPRPRLA 136
Query: 177 DSSKKKSTKKQNKNKMAS 194
+ +++
Sbjct: 137 AVAPPSGDDERSDEAADE 154
>gi|294634677|ref|ZP_06713210.1| stringent starvation protein B [Edwardsiella tarda ATCC 23685]
gi|291091923|gb|EFE24484.1| stringent starvation protein B [Edwardsiella tarda ATCC 23685]
Length = 162
Score = 45.3 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 13/98 (13%), Positives = 30/98 (30%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L++ D+ F VP ++ +P A+ Y F+ + ++
Sbjct: 64 LELADDAVRFNARFGGVPRQVYVPMAAVMAIYARENGAGTMFEPEAAYDQDAELAQVAES 123
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
+ + S+ +D + T V+
Sbjct: 124 DEEPAMTLIEGEGPSIEEDDGGDEPTPPPRGRPALRVV 161
>gi|256113958|ref|ZP_05454741.1| hypothetical protein Bmelb3E_14335 [Brucella melitensis bv. 3 str.
Ether]
Length = 76
Score = 44.9 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 10/76 (13%)
Query: 139 EFDVHIEHIEEKLEGGNTGKVLT-SPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM----- 192
EFDV + + GN + +P+ DK + + + KK+S ++ +
Sbjct: 1 EFDVAVLQPASDNDEGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKA 60
Query: 193 ----ASVISLDNFRKK 204
A V+SLD FRKK
Sbjct: 61 PKPTADVVSLDAFRKK 76
>gi|238796203|ref|ZP_04639713.1| Stringent starvation protein B [Yersinia mollaretii ATCC 43969]
gi|238719896|gb|EEQ11702.1| Stringent starvation protein B [Yersinia mollaretii ATCC 43969]
Length = 169
Score = 44.9 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 32/99 (32%), Gaps = 3/99 (3%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV---HIEHIEEKLEGG 154
DL++ ++ F VP ++ +P AI Y F+ + +E EG
Sbjct: 62 DLELGNDGVSFNARFGGVPRQVSVPMAAIIAIYARENGSGTLFEPEEAYDSDVEGDSEGI 121
Query: 155 NTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
G + + SQD + + +
Sbjct: 122 EEGNSAPTDNLMLVTGETPSSQDDNALPDDEPPQPPRSG 160
>gi|188025679|ref|ZP_02959433.2| hypothetical protein PROSTU_01288 [Providencia stuartii ATCC 25827]
gi|188022711|gb|EDU60751.1| hypothetical protein PROSTU_01288 [Providencia stuartii ATCC 25827]
Length = 164
Score = 44.2 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 12/97 (12%), Positives = 32/97 (32%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+ ++ ++ F VP ++ +P AI Y + F+ + E+
Sbjct: 63 NFEITNDEVRFNARFGGVPRQVYVPMAAIIAIYSRENGAGMMFEPETAYEEQLSGEPEVV 122
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMAS 194
+ + + +++ S +S+ S
Sbjct: 123 EDNPADNIMLVHESEPTSDESTASDDEPTPPPKGRPS 159
>gi|284008704|emb|CBA75376.1| stringent starvation protein B [Arsenophonus nasoniae]
Length = 163
Score = 43.8 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 31/101 (30%), Gaps = 2/101 (1%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ + F VP R+ +P AI Y + F+ E+ +
Sbjct: 62 NLELTNEIVSFSARFGGVPRRVEVPMCAIIAIYGRENGAGMMFEPEPEYESGSGDSVAKS 121
Query: 158 K--VLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
+ VL S S SS + VI
Sbjct: 122 ENLVLISDTELSNEAQEITSISSSDDEPPTPPKGRPTLRVI 162
>gi|317494020|ref|ZP_07952436.1| stringent starvation protein B [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917793|gb|EFV39136.1| stringent starvation protein B [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 165
Score = 42.6 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 29/103 (28%), Gaps = 4/103 (3%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKL----EG 153
+L++ D+ F VP + +P +A+ Y F+ + E E
Sbjct: 62 NLELGDDAVRFNARFGGVPRNVYVPISAVMAIYSRENGAGTMFEPEPAYENEMPLMSVED 121
Query: 154 GNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
+ +S D + T V+
Sbjct: 122 EEASSEPSMTVIDGNLPDSSTESDDDGDEPTPPPRGRPSLRVV 164
>gi|238918546|ref|YP_002932060.1| hypothetical protein NT01EI_0596 [Edwardsiella ictaluri 93-146]
gi|238868114|gb|ACR67825.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 158
Score = 42.6 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 32/96 (33%), Gaps = 1/96 (1%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L++ D+ F VP ++ +P A+ Y F+ + ++ E +
Sbjct: 58 LELADDAVRFNARFGGVPRQVYVPMAAVMAIYARENGAGTMFEPEAAYEQDTDETRIEAE 117
Query: 159 VLTSPDNF-DKNQTNSVSQDSSKKKSTKKQNKNKMA 193
P D +++ + + + + A
Sbjct: 118 NDEPPMMLIDGDRSPDNKAPADDDGGDEPPPRGRPA 153
>gi|134294536|ref|YP_001118271.1| ClpXP protease specificity-enhancing factor [Burkholderia
vietnamiensis G4]
gi|134137693|gb|ABO53436.1| Stringent starvation protein B [Burkholderia vietnamiensis G4]
Length = 168
Score = 42.6 bits (99), Expect = 0.032, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 3/124 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + + IV+ F L++ + E FS ++ IP + Y
Sbjct: 31 VDQSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKIEIPVANVLAIY 90
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
+ F V E + G + S D + S + + + N
Sbjct: 91 ARENGQGMAFQVDAVAGEGEDSGVAEDEGTPSDDAASPLTPVAESGANEEPSEGADEPPN 150
Query: 191 KMAS 194
Sbjct: 151 TDGD 154
>gi|149922765|ref|ZP_01911190.1| hypothetical protein PPSIR1_08227 [Plesiocystis pacifica SIR-1]
gi|149816385|gb|EDM75886.1| hypothetical protein PPSIR1_08227 [Plesiocystis pacifica SIR-1]
Length = 241
Score = 42.6 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 4/126 (3%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQF-WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDP 132
V + + + E + I + ++ DL + E LSF R V PF AI +D
Sbjct: 29 VVCPDFVVERHGESLIIDLDPEYPLDLAFTEVGVEADLSFGGFVTRCVFPFAAIYMIFDR 88
Query: 133 SVNFELEFDVHIEHI---EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK 189
++FD + ++ D+ + Q +++ + +
Sbjct: 89 ETGRGMKFDAAMPESVRRQQAAPKPAPKPKPRLVAVGDEGEPEPSEQAEQAEQAEQAEID 148
Query: 190 NKMASV 195
+A V
Sbjct: 149 PNLAKV 154
>gi|269137876|ref|YP_003294576.1| ClpXP protease specificity-enhancing factor [Edwardsiella tarda
EIB202]
gi|267983536|gb|ACY83365.1| ClpXP protease specificity-enhancing factor [Edwardsiella tarda
EIB202]
gi|304557929|gb|ADM40593.1| ClpXP protease specificity-enhancing factor / Stringent starvation
protein B [Edwardsiella tarda FL6-60]
Length = 163
Score = 42.6 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 32/97 (32%), Gaps = 1/97 (1%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEG-GNT 156
L++ D+ F VP ++ +P A+ Y F+ + ++ E T
Sbjct: 62 GLELADDAVRFNARFGGVPRQVYVPMAAVMAIYARENGAGTMFEPEAAYEQDGDETRAET 121
Query: 157 GKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ D +++ + + + + A
Sbjct: 122 ESDEPAMTLIDGDRSPDNEAPADDDGGDEPPPRGRPA 158
>gi|253686700|ref|YP_003015890.1| Stringent starvation protein B [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251753278|gb|ACT11354.1| Stringent starvation protein B [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 167
Score = 42.2 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 35/105 (33%), Gaps = 6/105 (5%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE------HIEEKL 151
L++ D+ F VP ++ +P A+ Y F+ E+
Sbjct: 62 GLELADDSVRFNARFGGVPRQVYVPMAAVMAIYARENGAGTMFEPEPAYEESAGEFEDFQ 121
Query: 152 EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
EG +G V++ D+ ++ S + + V+
Sbjct: 122 EGAPSGTVMSIVDSSPDSEAPDGGSGSDDEPPQPPKGGRPSLRVV 166
>gi|92114326|ref|YP_574254.1| stringent starvation protein B [Chromohalobacter salexigens DSM
3043]
gi|91797416|gb|ABE59555.1| Stringent starvation protein B [Chromohalobacter salexigens DSM
3043]
Length = 160
Score = 42.2 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 39/133 (29%), Gaps = 7/133 (5%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLV 120
YI GV + + Y + IV+ + DL + + G FS P +++
Sbjct: 24 YIVVDAEQDGVSVPR----QYVQNGQIVLNIAPSAVRDLYIENAAVTFGARFSGQPMQVI 79
Query: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
+P A+ Y + F E + E + S++ +
Sbjct: 80 VPMEALIALYARENGVGMVFGHEPVMPEAENESTGEEAQEQEGSRPALESVEAPSEEDAD 139
Query: 181 KKSTKKQNKNKMA 193
+
Sbjct: 140 SGDQDDEAPRTKG 152
>gi|227326656|ref|ZP_03830680.1| ClpXP protease specificity-enhancing factor [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 167
Score = 41.9 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 29/98 (29%), Gaps = 2/98 (2%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF--DVHIEHIEEKLEGGN 155
L++ D+ F VP ++ +P A+ Y F + E E +
Sbjct: 62 GLELADDSVRFNARFGGVPRQVYVPMAAVMAIYARENGAGTMFESEPAYESAGEYEDFQE 121
Query: 156 TGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ + + +S + D + K
Sbjct: 122 GAPASGTVMSIVDSSPDSEAPDDGSGSDDEPPQPPKGG 159
>gi|167625532|ref|YP_001675826.1| ClpXP protease specificity-enhancing factor [Shewanella
halifaxensis HAW-EB4]
gi|167355554|gb|ABZ78167.1| Stringent starvation protein B [Shewanella halifaxensis HAW-EB4]
Length = 156
Score = 41.5 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 46/117 (39%), Gaps = 7/117 (5%)
Query: 72 RGVRISQNLRKNYPEKMTIVI---QNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
G ++ Q Y + IV+ ++ L++ + E F VP+++++P +I
Sbjct: 35 PGTQVPQ----QYVKDGQIVLNITESAVGGLQITNEFIEFSARFGGVPQQVLLPMASIVA 90
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
Y F++ + + +G + + +T+ D+ + K +K
Sbjct: 91 IYARENGAGTVFELEEAYQLDDENEEESGLSVVLKEPEPVVETSEPEPDNVEAKESK 147
>gi|127511508|ref|YP_001092705.1| ClpXP protease specificity-enhancing factor [Shewanella loihica
PV-4]
gi|126636803|gb|ABO22446.1| Stringent starvation protein B [Shewanella loihica PV-4]
Length = 152
Score = 41.5 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 7/113 (6%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
G ++ Q Y + IV+ + +L++ + E F VP+++V+P +I
Sbjct: 35 PGTQVPQ----QYVKDGQIVLNITASAVGNLQIGHDFIEFNARFGGVPQQVVLPMASIVA 90
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKK 181
Y FD + E V+ P + + +++ K
Sbjct: 91 IYARENGAGTVFDQEEAYQLEADARDLGLSVVDEPKTDEPAVAEASAENDKPK 143
>gi|167838106|ref|ZP_02464965.1| ClpXP protease specificity-enhancing factor [Burkholderia
thailandensis MSMB43]
Length = 169
Score = 41.5 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + + IV+ F L++ + E FS ++ +P + Y
Sbjct: 33 VDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKIEVPVANVLAIY 92
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
+ F V + EGG + D+ + + + + + + + +
Sbjct: 93 ARENGQGMAFQVDVAADSGDAEGGGALAAEEAGDDAGAHVVPAEAVPEAGEPADELPKSD 152
Query: 191 KMAS 194
Sbjct: 153 GDGD 156
>gi|238785112|ref|ZP_04629107.1| Stringent starvation protein B [Yersinia bercovieri ATCC 43970]
gi|238714004|gb|EEQ06021.1| Stringent starvation protein B [Yersinia bercovieri ATCC 43970]
Length = 171
Score = 41.5 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 30/102 (29%), Gaps = 6/102 (5%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ ++ F VP ++++P AI Y F+ + +
Sbjct: 62 NLELGNDGVSFNARFGGVPRQVIVPMAAIVAIYARENGSGTMFEPEEAYDSDAEGNFEGI 121
Query: 158 KVLTSPDNFDK------NQTNSVSQDSSKKKSTKKQNKNKMA 193
+ + ++T S D+ Q
Sbjct: 122 EEEEGNNAPADNLMLVTDETPSSQDDNGSPDDEPPQPPRSGG 163
>gi|212633672|ref|YP_002310197.1| ClpXP protease specificity-enhancing factor [Shewanella
piezotolerans WP3]
gi|212555156|gb|ACJ27610.1| Stringent starvation protein b [Shewanella piezotolerans WP3]
Length = 151
Score = 41.1 bits (95), Expect = 0.094, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 7/112 (6%)
Query: 72 RGVRISQNLRKNYPEKMTIVI---QNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
G ++ Q Y + IV+ ++ L++ + E F VP+++++P AI
Sbjct: 35 PGTQVPQ----QYVKDGQIVLNITESAVGGLQITNEFIEFSARFGGVPQQVLLPMAAIVA 90
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
Y FDV + E E V + + K
Sbjct: 91 IYARENGAGTVFDVEEAYQLEDTEEAGLSVVEEPVAEVSEPEEIKEEVKEPK 142
>gi|33591509|ref|NP_879153.1| ClpXP protease specificity-enhancing factor [Bordetella pertussis
Tohama I]
gi|33603847|ref|NP_891407.1| ClpXP protease specificity-enhancing factor [Bordetella
bronchiseptica RB50]
gi|33571151|emb|CAE40652.1| stringent starvation protein B [Bordetella pertussis Tohama I]
gi|33577972|emb|CAE35237.1| stringent starvation protein B [Bordetella bronchiseptica RB50]
gi|332380904|gb|AEE65751.1| ClpXP protease specificity-enhancing factor [Bordetella pertussis
CS]
Length = 149
Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 24/85 (28%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L + + E FS V E + +P A+ Y + F+V E +
Sbjct: 59 LSLGNEFIEFQARFSGVTENVYVPVGAVSAIYARETGAGMGFEVQAYEAPEHADAAPPPP 118
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKS 183
+ + K+
Sbjct: 119 ESAEAGDAAASPAGDDGDGDEPKRP 143
>gi|282599964|ref|ZP_05972527.2| stringent starvation protein B [Providencia rustigianii DSM 4541]
gi|282567021|gb|EFB72556.1| stringent starvation protein B [Providencia rustigianii DSM 4541]
Length = 164
Score = 40.7 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 31/96 (32%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+ ++ + F VP ++ +P AI Y + F+ + E E +
Sbjct: 63 NFEITNEEVRFNARFGGVPRQVYVPMAAIMAVYARENGAGMMFEPEAAYDEHFSEENDIT 122
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ + + ++ + +SS +
Sbjct: 123 DETPADNIILVHDESAQTDESSTPDDEPPRPPKGRP 158
>gi|289647025|ref|ZP_06478368.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. aesculi str. 2250]
Length = 136
Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 27/81 (33%), Gaps = 1/81 (1%)
Query: 97 WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE-HIEEKLEGGN 155
L + + F VP L +P AI G Y + FD+ E++E +
Sbjct: 56 RHLHMDNEAVSFEGRFGGVPHTLYVPVAAILGIYARENGQGMVFDLEPSMDDGEEIEIED 115
Query: 156 TGKVLTSPDNFDKNQTNSVSQ 176
+ P + V +
Sbjct: 116 DTPPDSEPPRPSGRPSLKVVK 136
>gi|85058197|ref|YP_453899.1| ClpXP protease specificity-enhancing factor [Sodalis glossinidius
str. 'morsitans']
gi|84778717|dbj|BAE73494.1| stringent starvation protein B [Sodalis glossinidius str.
'morsitans']
Length = 166
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 35/104 (33%), Gaps = 5/104 (4%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE---EKLEGG 154
+L + ++ + F VP+++V+P A+ Y F+ + + + +
Sbjct: 62 NLTLDNDDVQFNARFGGVPQQVVVPMAAVLAIYARENGAGTMFEPEVAYEQLTLADDDSA 121
Query: 155 NTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMAS--VI 196
T D + ++ D + K S V+
Sbjct: 122 EEPATETVMSVIDVDWPDNAQADDPEDKPPSPPRGGGRPSLRVV 165
>gi|289624967|ref|ZP_06457921.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. aesculi str. NCPPB3681]
gi|330868700|gb|EGH03409.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. aesculi str. 0893_23]
gi|330888590|gb|EGH21251.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. mori str. 301020]
Length = 136
Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 27/81 (33%), Gaps = 1/81 (1%)
Query: 97 WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE-HIEEKLEGGN 155
L + + F VP L +P AI G Y + FD+ E++E +
Sbjct: 56 RHLHMDNEAVSFEGRFGGVPHTLYVPVAAILGIYARENGQGMVFDLEPSMDDGEEIEIED 115
Query: 156 TGKVLTSPDNFDKNQTNSVSQ 176
+ P + V +
Sbjct: 116 DTPPDSEPPRPSGRPSLKVVK 136
>gi|33598773|ref|NP_886416.1| ClpXP protease specificity-enhancing factor [Bordetella
parapertussis 12822]
gi|33574903|emb|CAE39566.1| stringent starvation protein B [Bordetella parapertussis]
Length = 149
Score = 40.3 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 24/85 (28%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L + + E FS V E + +P A+ Y + F+V E +
Sbjct: 59 LSLGNEFIEFQARFSGVTENVYVPVGAVSAIYARETGAGIGFEVQAYEAPEHADAATPPP 118
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKS 183
+ + K+
Sbjct: 119 ESAEAGDAAASPAGDDGDGDEPKRP 143
>gi|212711103|ref|ZP_03319231.1| hypothetical protein PROVALCAL_02172 [Providencia alcalifaciens DSM
30120]
gi|212686271|gb|EEB45799.1| hypothetical protein PROVALCAL_02172 [Providencia alcalifaciens DSM
30120]
Length = 164
Score = 40.3 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 32/97 (32%), Gaps = 1/97 (1%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE-KLEGGNT 156
+ ++ + F VP ++ +P AI Y + F+ + E E
Sbjct: 63 NFEITNEEVRFNARFGGVPRQVYVPMAAIMAVYARENGAGMMFEPEAAYDEHFDGEDDAA 122
Query: 157 GKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ L+ ++ + SS + K + A
Sbjct: 123 DETLSDNIVLVHDEVPQTEEPSSPDDEPPRPPKGRPA 159
>gi|157963346|ref|YP_001503380.1| ClpXP protease specificity-enhancing factor [Shewanella pealeana
ATCC 700345]
gi|157848346|gb|ABV88845.1| Stringent starvation protein B [Shewanella pealeana ATCC 700345]
Length = 153
Score = 40.3 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 43/114 (37%), Gaps = 7/114 (6%)
Query: 72 RGVRISQNLRKNYPEKMTIVI---QNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
G ++ Q Y + IV+ ++ L++ + E F VP+++++P +I
Sbjct: 35 PGTQVPQ----QYVKDGQIVLNITESAVAGLQITNEFIEFSARFGGVPQQVLLPMASIVA 90
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
Y F++ + + G + + ++ + ++ + K
Sbjct: 91 IYARENGAGTVFELEEAYQLDDDFEEEAGLSVVKEPVVETSEPEAEKVEAKEPK 144
>gi|149910613|ref|ZP_01899251.1| Stringent starvation protein B [Moritella sp. PE36]
gi|149806341|gb|EDM66316.1| Stringent starvation protein B [Moritella sp. PE36]
Length = 163
Score = 39.9 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 26/85 (30%), Gaps = 3/85 (3%)
Query: 112 FSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKN-- 169
F VP + +P AI Y F+ +I++ + V S +
Sbjct: 74 FGGVPFDVYVPIAAITAIYARENGAGSMFEPEQAYIDQAEQDSAEVAVEPSEEKSKPALV 133
Query: 170 -QTNSVSQDSSKKKSTKKQNKNKMA 193
S+ S K K K A
Sbjct: 134 SAPAVSSESQSDAPERPKPAKGKPA 158
>gi|260914120|ref|ZP_05920593.1| stringent starvation protein B [Pasteurella dagmatis ATCC 43325]
gi|260631753|gb|EEX49931.1| stringent starvation protein B [Pasteurella dagmatis ATCC 43325]
Length = 153
Score = 39.5 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ ++ F VP+ + IP A Y + F+ E I ++LE +
Sbjct: 61 NLQLTNDFIAFNARFRGVPQDIYIPMGAALAIYARENGDGVMFEP--EEIYDELEKTMSE 118
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKK 186
+ L+ + DK +T Q S +K
Sbjct: 119 QPLSFAEAVDKPKTQPKPQAQSTEKKAPS 147
>gi|227112759|ref|ZP_03826415.1| ClpXP protease specificity-enhancing factor [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 167
Score = 39.5 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 36/105 (34%), Gaps = 6/105 (5%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI------EHIEEKL 151
L++ D+ F VP ++ +P A+ Y F+ E+ + +
Sbjct: 62 GLELADDSVRFNARFGGVPRQVYVPMAAVMAIYARENGAGTMFESEPAYESAGEYEDFQE 121
Query: 152 EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
+G V++ D+ ++ DS + + V+
Sbjct: 122 GVPASGTVMSIVDSSPDSEAPGDGSDSDDEPPQPPKGGRPSLRVV 166
>gi|291287662|ref|YP_003504478.1| hypothetical protein Dacet_1758 [Denitrovibrio acetiphilus DSM
12809]
gi|290884822|gb|ADD68522.1| hypothetical protein Dacet_1758 [Denitrovibrio acetiphilus DSM
12809]
Length = 134
Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 9/83 (10%)
Query: 94 NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG-FYDPSV-NFELEFDV-------HI 144
+ + L + + V + FS E L IP NA+ F DP F F
Sbjct: 52 HSYDKLSLESDCITVNMKFSGSWESLYIPLNAVSAIFNDPVKPEFMFSFKPVVRTEGSEE 111
Query: 145 EHIEEKLEGGNTGKVLTSPDNFD 167
+++ + + GK+L P +
Sbjct: 112 TVMDDPADNDSGGKILEFPKRKN 134
>gi|37527867|ref|NP_931212.1| ClpXP protease specificity-enhancing factor [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36787303|emb|CAE16384.1| Stringent starvation protein B [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 171
Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 32/96 (33%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ ++ F VP R+ IP A+ Y + F+ + +E L +
Sbjct: 62 NLELTNDEVRFNARFGGVPRRVNIPMAAVIAIYGRENRAGMMFEPEAAYKDEYLFKSASD 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ F + V+ + + +
Sbjct: 122 QDKADTSAFATDNLVLVTDTLPDAEDNSGTSPDDEP 157
>gi|41407826|ref|NP_960662.1| YfnB [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41396180|gb|AAS04045.1| YfnB [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 240
Score = 39.5 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 13/92 (14%)
Query: 14 WFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARG 73
W ++ W D L ++ AL L +A G LP + FA G
Sbjct: 104 WQRLVPWPDVLPGLTLLK-KKFIIAALSNADVSALINIAKRGGLPWDA----VFAAEMAG 158
Query: 74 VRISQ----NLRKNY----PEKMTIVIQNQFW 97
V ++ Y P ++ +V +++
Sbjct: 159 VFKPDPAIYHMAARYLGLAPPQIMMVASHKYD 190
>gi|298488520|ref|ZP_07006550.1| Stringent starvation protein B [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298156861|gb|EFH97951.1| Stringent starvation protein B [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 136
Score = 39.5 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 27/81 (33%), Gaps = 1/81 (1%)
Query: 97 WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE-HIEEKLEGGN 155
L + + F VP L +P AI G Y + FD+ E++E +
Sbjct: 56 RHLHMDNEAVSFEGRFGGVPHTLYVPVAAILGIYALENGQGMVFDLEPSMDDGEEIEIED 115
Query: 156 TGKVLTSPDNFDKNQTNSVSQ 176
+ P + V +
Sbjct: 116 DTPPDSEPPRPSGRPSLKVVK 136
>gi|294139264|ref|YP_003555242.1| stringent starvation protein B [Shewanella violacea DSS12]
gi|293325733|dbj|BAJ00464.1| stringent starvation protein B [Shewanella violacea DSS12]
Length = 172
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 8/124 (6%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
G ++ Q Y + IV+ +L++ + E F VP+++V+P AI
Sbjct: 35 PGTQVPQ----QYVKDGQIVLNITSTAVSNLQIGHDFIEFNARFGGVPQQVVLPMAAIVA 90
Query: 129 FYDPSVNFELEFDVHIE-HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQ 187
Y FD+ ++ + V + ++ S +SS ++ K +
Sbjct: 91 IYARENGAGTVFDMEDAYKLDGESAEAGLSVVKPEEASVAGLKSPLSSVESSPSETPKFE 150
Query: 188 NKNK 191
+
Sbjct: 151 SSAD 154
>gi|262195422|ref|YP_003266631.1| hypothetical protein Hoch_2193 [Haliangium ochraceum DSM 14365]
gi|262078769|gb|ACY14738.1| hypothetical protein Hoch_2193 [Haliangium ochraceum DSM 14365]
Length = 252
Score = 39.2 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 38/123 (30%), Gaps = 10/123 (8%)
Query: 68 ATNARGVRISQNLRKNYPEKMTIVIQNQFW------DLKVLDNHFEVGLSFSNVPERLVI 121
T + + + + +V++ + D + D L+F P V+
Sbjct: 123 DTRVPSASVP----EQFRGQARLVLRFGYRLSPPIVDFSIDDIGIHGTLTFGGKPFACVV 178
Query: 122 PFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKK 181
P++A+ S + + + G G + + Q ++ K
Sbjct: 179 PWSALYAVVAESNGQGTVWPEDVPDEILEELGLAGGTEDGGAADSGEPQQVPSAEPEPPK 238
Query: 182 KST 184
ST
Sbjct: 239 SST 241
>gi|237814045|ref|YP_002898496.1| stringent starvation protein B [Burkholderia pseudomallei MSHR346]
gi|237505893|gb|ACQ98211.1| stringent starvation protein B [Burkholderia pseudomallei MSHR346]
Length = 169
Score = 39.2 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 38/119 (31%), Gaps = 3/119 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + + IV+ F L++ + E FS +L +P + Y
Sbjct: 31 VDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKLEVPVANVLAIY 90
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK 189
+ F V + + +G + V D+ ++ + + +
Sbjct: 91 ARENGQGMAFQVDVAAEMGEADGSDALAVAEEGDDAGARHASAEAAPEPGDAAEELPKS 149
>gi|149016401|gb|EDL75647.1| inositol polyphosphate-5-phosphatase D, isoform CRA_a [Rattus
norvegicus]
Length = 770
Score = 39.2 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 32/107 (29%), Gaps = 6/107 (5%)
Query: 96 FWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFEL----EFDVHIEHIEEKL 151
+ L D+ F V S VP R + + FY N L +F V +E +
Sbjct: 56 YRILPNEDDKFTVQAS-EGVPMRFFTKLDQLIEFYKKE-NMGLVTHLQFPVPLEEEDAID 113
Query: 152 EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISL 198
E + + SP + K + V L
Sbjct: 114 EPEEDTESVMSPPELPPRNIPVSAGPCEAKDLPLPTENPRAPEVTRL 160
>gi|124266046|ref|YP_001020050.1| ClpXP protease specificity-enhancing factor [Methylibium
petroleiphilum PM1]
gi|124258821|gb|ABM93815.1| putative stringent starvation protein B [Methylibium petroleiphilum
PM1]
Length = 178
Score = 39.2 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 33/115 (28%), Gaps = 3/115 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + Y + IV+ F L++ ++ F +V+P + + Y
Sbjct: 39 VDGSVQVPAEYVKNNEIVLNASFEATSSLQLGNDFISFKARFGGTAREIVVPIDHVIAIY 98
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
+ F E GN+ + + + D S
Sbjct: 99 ARENGQGMAFPAPPVGAEPPPAEGNSSAAEAAAAPRGLRLAETPAADPSPGDEGA 153
>gi|295677834|ref|YP_003606358.1| Stringent starvation protein B [Burkholderia sp. CCGE1002]
gi|295437677|gb|ADG16847.1| Stringent starvation protein B [Burkholderia sp. CCGE1002]
Length = 165
Score = 39.2 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 41/133 (30%), Gaps = 8/133 (6%)
Query: 69 TNARGVRISQ--NLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPF 123
T VR+ + + + IV+ F L++ + E FS ++ +P
Sbjct: 24 TPHIAVRVDNQTRVPRQFVRDNEIVLNISFEATSQLQMGNEWIEFNARFSGKSHKIEVPV 83
Query: 124 NAIKGFYDPSVNFELEFDVHIEHIEEKL---EGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
I Y + F V E + + + +P + + + +
Sbjct: 84 ANILAIYARENGQGMAFPVESAGGEAQDSGADAADEADTPAAPRAVETAPADRAAASDAH 143
Query: 181 KKSTKKQNKNKMA 193
K + +K
Sbjct: 144 DKPQPDDDGSKGG 156
>gi|149016402|gb|EDL75648.1| inositol polyphosphate-5-phosphatase D, isoform CRA_b [Rattus
norvegicus]
Length = 894
Score = 39.2 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 32/107 (29%), Gaps = 6/107 (5%)
Query: 96 FWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFEL----EFDVHIEHIEEKL 151
+ L D+ F V S VP R + + FY N L +F V +E +
Sbjct: 56 YRILPNEDDKFTVQAS-EGVPMRFFTKLDQLIEFYKKE-NMGLVTHLQFPVPLEEEDAID 113
Query: 152 EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISL 198
E + + SP + K + V L
Sbjct: 114 EPEEDTESVMSPPELPPRNIPVSAGPCEAKDLPLPTENPRAPEVTRL 160
>gi|300113105|ref|YP_003759680.1| stringent starvation protein B [Nitrosococcus watsonii C-113]
gi|299539042|gb|ADJ27359.1| Stringent starvation protein B [Nitrosococcus watsonii C-113]
Length = 134
Score = 39.2 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 7/98 (7%)
Query: 68 ATNARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFN 124
T GV+I Q + + I++ N +L + ++ FS P + + P
Sbjct: 36 DTTLPGVQIPQ----QHASEGKIILNIHPNSVRNLCLENDWISFSARFSGTPYKALFPVQ 91
Query: 125 AIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTS 162
A Y + F E + G S
Sbjct: 92 ATLAIYARENGQGMAFQKGDHDSEPPPPAPDEGSRKPS 129
>gi|317403218|gb|EFV83738.1| stringent starvation protein B [Achromobacter xylosoxidans C54]
Length = 147
Score = 39.2 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 26/85 (30%), Gaps = 2/85 (2%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L + + E FS V E + +P A+ Y + F+V E G
Sbjct: 59 LVLGNEFIEFQARFSGVTENVYVPVGAVSAIYARETGAGMGFEVQP--YEPPAPGTPGAS 116
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKS 183
SP+ D K+
Sbjct: 117 DTASPEADADTAPGDDGGDDEPKRP 141
>gi|170728487|ref|YP_001762513.1| ClpXP protease specificity-enhancing factor [Shewanella woodyi ATCC
51908]
gi|169813834|gb|ACA88418.1| Stringent starvation protein B [Shewanella woodyi ATCC 51908]
Length = 154
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 42/114 (36%), Gaps = 7/114 (6%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
G ++ Q Y + IV+ + +L++ + E F VP+++V+P +I
Sbjct: 35 PGTQVPQ----QYVKDGQIVLNITSSAVGNLQIGHEYIEFNARFGGVPQQVVLPMASIVA 90
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
Y FDV + E E + V+ ++ D + +
Sbjct: 91 IYARENGAGTVFDVEEAYQLEDDEFESGLSVVEEAEDEDVVIEAVDETPKTSEP 144
>gi|91794545|ref|YP_564196.1| ClpXP protease specificity-enhancing factor [Shewanella
denitrificans OS217]
gi|91716547|gb|ABE56473.1| Stringent starvation protein B [Shewanella denitrificans OS217]
Length = 152
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 30/86 (34%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L + ++ E F VP+++V+P AI Y FD+ ++ E +
Sbjct: 60 NLHIGNDFVEFNARFGGVPQQVVVPLAAIVAIYARENGAGTVFDMEDAYMIESDLDQLSS 119
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKS 183
D + + K+
Sbjct: 120 VAPALSGVKDTKSDEAKKTSETTKRP 145
>gi|119776149|ref|YP_928889.1| ClpXP protease specificity-enhancing factor [Shewanella amazonensis
SB2B]
gi|119768649|gb|ABM01220.1| stringent starvation protein b [Shewanella amazonensis SB2B]
Length = 152
Score = 38.8 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 32/83 (38%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L++ ++ E F VP ++V+P +I Y FD ++ ++ E
Sbjct: 61 LQLGNDAVEFNARFGGVPHQVVLPMASIVAIYARENGAGTVFDAEDAYLLDEGEDELLSV 120
Query: 159 VLTSPDNFDKNQTNSVSQDSSKK 181
V + P+ + D S K
Sbjct: 121 VESEPEEALTTEEPDGPDDPSPK 143
>gi|330957985|gb|EGH58245.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. maculicola str. ES4326]
Length = 138
Score = 38.8 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 28/79 (35%), Gaps = 1/79 (1%)
Query: 97 WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNT 156
L + + F VP L +P AI G Y + FD+ +E+ E
Sbjct: 56 RHLHMDNEAVSFEGRFGGVPHTLYVPVAAILGIYARENGQGMVFDLE-PSLEDGDEIEIE 114
Query: 157 GKVLTSPDNFDKNQTNSVS 175
+ T PD+ + S
Sbjct: 115 VEDDTPPDSEPPRPSGRPS 133
>gi|297537516|ref|YP_003673285.1| Stringent starvation protein B [Methylotenera sp. 301]
gi|297256863|gb|ADI28708.1| Stringent starvation protein B [Methylotenera sp. 301]
Length = 140
Score = 38.8 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 27/68 (39%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
DL + + F V + L +P +A+KG + + F++ + + + G
Sbjct: 59 DLLIDNEAISFSARFGGVSQNLYVPMHAVKGIFARENGQGMFFEIEDASLYAGKDEASDG 118
Query: 158 KVLTSPDN 165
+ S D
Sbjct: 119 QAEPSEDK 126
>gi|88704085|ref|ZP_01101800.1| Stringent starvation protein B [Congregibacter litoralis KT71]
gi|88701912|gb|EAQ99016.1| Stringent starvation protein B [Congregibacter litoralis KT71]
Length = 131
Score = 38.8 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 7/95 (7%)
Query: 68 ATNARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFN 124
A GV + + Y + IV+ + +L++ D+ F P + +P
Sbjct: 28 DATAPGVDVP----EEYVKDGQIVLNLSPSAVIELQLADDCVSFNGRFGGKPTDVFMPMA 83
Query: 125 AIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKV 159
AI G Y + F+ + EGGN
Sbjct: 84 AILGIYARENGQGMAFEPEEGDDDPTPEGGNEPTP 118
>gi|300724948|ref|YP_003714273.1| stringent starvation protein B [Xenorhabdus nematophila ATCC 19061]
gi|297631490|emb|CBJ92197.1| stringent starvation protein B [Xenorhabdus nematophila ATCC 19061]
Length = 156
Score = 38.8 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 31/95 (32%), Gaps = 1/95 (1%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ ++ F + + +P +A+ Y + F+ E E
Sbjct: 57 NLELTNDDVRFNARFGGIAREVSVPMDAVVAIYARENGAGMMFE-PESAYEANDEAEEKH 115
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM 192
V + + +++ D S + K +
Sbjct: 116 SVSPADNLVQLHRSKISRDDGSPDDEPPQPPKGRP 150
>gi|206890269|ref|YP_002248035.1| hypothetical protein THEYE_A0185 [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206742207|gb|ACI21264.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 150
Score = 38.8 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 34/81 (41%)
Query: 102 LDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLT 161
++ L F N PE+ IP NAI G + P + +L V I+++ + +
Sbjct: 69 DEDAITATLVFGNTPEKCYIPINAIAGVFSPDLRVQLAVPVFKSKIKDEGDSSTATQNDK 128
Query: 162 SPDNFDKNQTNSVSQDSSKKK 182
+ + + N + +KK
Sbjct: 129 ENEKQKEKKDNVIDITKLRKK 149
>gi|149016403|gb|EDL75649.1| inositol polyphosphate-5-phosphatase D, isoform CRA_c [Rattus
norvegicus]
Length = 1125
Score = 38.8 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 32/107 (29%), Gaps = 6/107 (5%)
Query: 96 FWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFEL----EFDVHIEHIEEKL 151
+ L D+ F V S VP R + + FY N L +F V +E +
Sbjct: 56 YRILPNEDDKFTVQAS-EGVPMRFFTKLDQLIEFYKKE-NMGLVTHLQFPVPLEEEDAID 113
Query: 152 EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISL 198
E + + SP + K + V L
Sbjct: 114 EPEEDTESVMSPPELPPRNIPVSAGPCEAKDLPLPTENPRAPEVTRL 160
>gi|304310303|ref|YP_003809901.1| Stringent starvation protein B [gamma proteobacterium HdN1]
gi|301796036|emb|CBL44240.1| Stringent starvation protein B [gamma proteobacterium HdN1]
Length = 163
Score = 38.4 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 32/107 (29%), Gaps = 7/107 (6%)
Query: 97 WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNT 156
L + ++ E F V L +P +A+ Y + FD + E
Sbjct: 56 RGLVMDNDRVEFSARFGGVARTLYLPISAVLAIYAKENGRGMFFDENEMSSEGVEPSAVP 115
Query: 157 GKVLTSP-------DNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
K+ P + + + V + K K K V+
Sbjct: 116 AKMDDKPHGVLAPVAHTEAPHGSDVPPSDTPTKGGKGAKKRPSLKVV 162
>gi|310766210|gb|ADP11160.1| Stringent starvation protein B [Erwinia sp. Ejp617]
Length = 165
Score = 38.4 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 28/102 (27%), Gaps = 4/102 (3%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI----EHIEEKLEGG 154
L++ ++ F VP ++ +P A+ Y F+ + G
Sbjct: 63 LELGNDEVRFSARFGGVPRQVSVPLAAVLAIYARENGAGTMFEPEPVYDGSGEFQASNGE 122
Query: 155 NTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
+ +SV+ D + V+
Sbjct: 123 DEAPETVMSVIDGDRPDDSVADDDGPDGEPPPRGGRPALRVV 164
>gi|149016407|gb|EDL75653.1| inositol polyphosphate-5-phosphatase D, isoform CRA_g [Rattus
norvegicus]
Length = 457
Score = 38.4 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 32/107 (29%), Gaps = 6/107 (5%)
Query: 96 FWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFEL----EFDVHIEHIEEKL 151
+ L D+ F V S VP R + + FY N L +F V +E +
Sbjct: 56 YRILPNEDDKFTVQAS-EGVPMRFFTKLDQLIEFYKKE-NMGLVTHLQFPVPLEEEDAID 113
Query: 152 EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISL 198
E + + SP + K + V L
Sbjct: 114 EPEEDTESVMSPPELPPRNIPVSAGPCEAKDLPLPTENPRAPEVTRL 160
>gi|241763820|ref|ZP_04761866.1| Stringent starvation protein B [Acidovorax delafieldii 2AN]
gi|241366952|gb|EER61357.1| Stringent starvation protein B [Acidovorax delafieldii 2AN]
Length = 173
Score = 38.4 bits (88), Expect = 0.60, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 40/123 (32%), Gaps = 3/123 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + Y + IV+ F L++ ++ E F P +++P + Y
Sbjct: 34 VDGSVQVPREYVKDGEIVLNISFDATSSLQLGNDFIEFKARFGGKPRDILVPVGRVIAIY 93
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
+ F ++ ++ ++ ++ + Q + +S +
Sbjct: 94 ARENGQGMAFPPPVDMVDAAVDMAPVPSAPSAVQSATAEQADERVVQLVPAESAPAEGDA 153
Query: 191 KMA 193
Sbjct: 154 DAP 156
>gi|239504123|ref|ZP_04663433.1| ClpXP protease specificity-enhancing factor [Acinetobacter
baumannii AB900]
Length = 142
Score = 38.4 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 27/81 (33%)
Query: 91 VIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEK 150
++ + L + ++ F V + + +P A+ G Y L FD
Sbjct: 57 IVPHAVHQLHISNDAITFSARFGGVSKDIYVPIQAVLGIYARENGQGLFFDPEEYANVAP 116
Query: 151 LEGGNTGKVLTSPDNFDKNQT 171
+E + + + K T
Sbjct: 117 VEDKLDSETQETSEPTKKKPT 137
>gi|238751341|ref|ZP_04612834.1| Stringent starvation protein B [Yersinia rohdei ATCC 43380]
gi|238710399|gb|EEQ02624.1| Stringent starvation protein B [Yersinia rohdei ATCC 43380]
Length = 171
Score = 38.4 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 34/102 (33%), Gaps = 7/102 (6%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE-------K 150
DL++ ++ F VP ++++P +A+ Y F+ + +
Sbjct: 62 DLELGNDGVCFNARFGGVPRQVIVPMSAVMAIYARENGSGTMFEPEEAYDTDVDGNFVGI 121
Query: 151 LEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM 192
EGG+ S + + +S + ++
Sbjct: 122 EEGGSETASTESLTLVTGDAPAVEGEGNSPDDEPPQPPRSGG 163
>gi|261819656|ref|YP_003257762.1| ClpXP protease specificity-enhancing factor [Pectobacterium
wasabiae WPP163]
gi|261603669|gb|ACX86155.1| Stringent starvation protein B [Pectobacterium wasabiae WPP163]
Length = 167
Score = 38.4 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 2/98 (2%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF--DVHIEHIEEKLEGGN 155
L++ D+ F VP ++ +P A+ Y F + E E +
Sbjct: 62 GLELADDSVRFNARFGGVPRQVHVPMAAVMAIYARENGAGTMFESEPAYEGAGEYEDFQE 121
Query: 156 TGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ + + +S + + S + K
Sbjct: 122 GAPASGTVMSIVDSSPDSEALEDSSGSDDEPPQPPKGG 159
>gi|319761623|ref|YP_004125560.1| stringent starvation protein b [Alicycliphilus denitrificans BC]
gi|330823489|ref|YP_004386792.1| Stringent starvation protein B [Alicycliphilus denitrificans K601]
gi|317116184|gb|ADU98672.1| Stringent starvation protein B [Alicycliphilus denitrificans BC]
gi|329308861|gb|AEB83276.1| Stringent starvation protein B [Alicycliphilus denitrificans K601]
Length = 174
Score = 38.4 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 5/110 (4%)
Query: 90 IVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEH 146
IV+ + L++ ++ E F P L+IP + + Y + F + E
Sbjct: 51 IVLNVSYEATSGLQLGNDFIEFKARFGGKPCDLLIPVHRVIAIYARENGQGMAFPLDEEG 110
Query: 147 IEEKL--EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMAS 194
E+ G V P ++ S D S + K +
Sbjct: 111 GEKADVAPPRPAGVVAAPPAGAERAPVQLQSIDGSAGEGADKDAPHPPPQ 160
>gi|307944867|ref|ZP_07660204.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307771791|gb|EFO31015.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 43
Score = 38.0 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 12/35 (34%)
Query: 170 QTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ + T V+SLD FRKK
Sbjct: 8 DPGGSETANKQDTDTDTDTSEGGGEVVSLDAFRKK 42
>gi|307544537|ref|YP_003897016.1| stringent starvation protein B [Halomonas elongata DSM 2581]
gi|307216561|emb|CBV41831.1| K03600 stringent starvation protein B [Halomonas elongata DSM 2581]
Length = 159
Score = 38.0 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 45/139 (32%), Gaps = 10/139 (7%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLV 120
YI GV + + + + IV+ + DL + + F P +L+
Sbjct: 24 YIVVDAEQEGVEVPR----QFVQNGQIVLNMGVSAIRDLSMENEAISFSARFGGKPTQLM 79
Query: 121 IPFNAIKGFYDPSVNFELEF---DVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQD 177
+P A+ Y + F V + ++ E P ++T
Sbjct: 80 VPMEALIAIYARENGVGMVFGHEPVMPDVGHDESEAETGQDEAKGPTLASVDETEESEAS 139
Query: 178 SSKKKSTKKQNKNKMASVI 196
SS+++ + V+
Sbjct: 140 SSEREGETPRKGRPSLRVV 158
>gi|149016404|gb|EDL75650.1| inositol polyphosphate-5-phosphatase D, isoform CRA_d [Rattus
norvegicus]
Length = 417
Score = 38.0 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 32/107 (29%), Gaps = 6/107 (5%)
Query: 96 FWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFEL----EFDVHIEHIEEKL 151
+ L D+ F V S VP R + + FY N L +F V +E +
Sbjct: 56 YRILPNEDDKFTVQAS-EGVPMRFFTKLDQLIEFYKKE-NMGLVTHLQFPVPLEEEDAID 113
Query: 152 EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISL 198
E + + SP + K + V L
Sbjct: 114 EPEEDTESVMSPPELPPRNIPVSAGPCEAKDLPLPTENPRAPEVTRL 160
>gi|238789740|ref|ZP_04633522.1| Stringent starvation protein B [Yersinia frederiksenii ATCC 33641]
gi|238722099|gb|EEQ13757.1| Stringent starvation protein B [Yersinia frederiksenii ATCC 33641]
Length = 171
Score = 38.0 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 30/104 (28%), Gaps = 8/104 (7%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE-------- 149
+L++ ++ F VP ++ +P A+ Y F+ + +
Sbjct: 62 NLELGNDGVSFNARFGGVPRQVTVPMGAVMAIYARENGSGTMFEPEEAYDSDADGNFVGI 121
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ EG T + D Q S + +
Sbjct: 122 EEEGIETASTESLTLVTDDTQAPEGGGHSPDDEPPQPPRSGGRP 165
>gi|193078418|gb|ABO13404.2| stringent starvation protein B [Acinetobacter baumannii ATCC 17978]
Length = 142
Score = 38.0 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 27/81 (33%)
Query: 91 VIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEK 150
++ + L + ++ F V + + +P A+ G Y L FD
Sbjct: 57 IVPHAVHQLLISNDAITFSARFGGVSKDIYVPIQAVLGIYARENGQGLFFDPEEYANVAP 116
Query: 151 LEGGNTGKVLTSPDNFDKNQT 171
LE + + + K T
Sbjct: 117 LEDKLDSETQETSEPTKKKPT 137
>gi|126643022|ref|YP_001086006.1| stringent starvation protein B [Acinetobacter baumannii ATCC 17978]
Length = 95
Score = 38.0 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 27/81 (33%)
Query: 91 VIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEK 150
++ + L + ++ F V + + +P A+ G Y L FD
Sbjct: 10 IVPHAVHQLLISNDAITFSARFGGVSKDIYVPIQAVLGIYARENGQGLFFDPEEYANVAP 69
Query: 151 LEGGNTGKVLTSPDNFDKNQT 171
LE + + + K T
Sbjct: 70 LEDKLDSETQETSEPTKKKPT 90
>gi|293602851|ref|ZP_06685290.1| stringent starvation protein B [Achromobacter piechaudii ATCC
43553]
gi|292818645|gb|EFF77687.1| stringent starvation protein B [Achromobacter piechaudii ATCC
43553]
Length = 151
Score = 37.6 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 3/91 (3%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L + + E FS V E + +P A+ Y + F+V E E G G
Sbjct: 59 LVLGNEFIEFQARFSGVTENVYVPVGAVSAIYARETGAGMGFEVQPY---EPPEAGAQGA 115
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK 189
+ Q ++ D K+ +
Sbjct: 116 AEPAAPEGADAQADASQGDDGGNDDEPKRPR 146
>gi|169794668|ref|YP_001712461.1| ClpXP protease specificity-enhancing factor [Acinetobacter
baumannii AYE]
gi|184159522|ref|YP_001847861.1| ClpXP protease specificity-enhancing factor [Acinetobacter
baumannii ACICU]
gi|213157960|ref|YP_002320758.1| stringent starvation protein B [Acinetobacter baumannii AB0057]
gi|215482258|ref|YP_002324440.1| Stringent starvation protein B family protein [Acinetobacter
baumannii AB307-0294]
gi|260558125|ref|ZP_05830335.1| stringent starvation protein B [Acinetobacter baumannii ATCC 19606]
gi|301345855|ref|ZP_07226596.1| ClpXP protease specificity-enhancing factor [Acinetobacter
baumannii AB056]
gi|301512171|ref|ZP_07237408.1| ClpXP protease specificity-enhancing factor [Acinetobacter
baumannii AB058]
gi|301595551|ref|ZP_07240559.1| ClpXP protease specificity-enhancing factor [Acinetobacter
baumannii AB059]
gi|332851551|ref|ZP_08433528.1| stringent starvation protein B [Acinetobacter baumannii 6013150]
gi|332867750|ref|ZP_08437822.1| stringent starvation protein B [Acinetobacter baumannii 6013113]
gi|332873485|ref|ZP_08441436.1| stringent starvation protein B [Acinetobacter baumannii 6014059]
gi|169147595|emb|CAM85456.1| stringent starvation protein B [Acinetobacter baumannii AYE]
gi|183211116|gb|ACC58514.1| Stringent starvation protein B [Acinetobacter baumannii ACICU]
gi|213057120|gb|ACJ42022.1| stringent starvation protein B [Acinetobacter baumannii AB0057]
gi|213986397|gb|ACJ56696.1| Stringent starvation protein B family protein [Acinetobacter
baumannii AB307-0294]
gi|260408398|gb|EEX01706.1| stringent starvation protein B [Acinetobacter baumannii ATCC 19606]
gi|322509434|gb|ADX04888.1| sspB [Acinetobacter baumannii 1656-2]
gi|323519455|gb|ADX93836.1| ClpXP protease specificity-enhancing factor [Acinetobacter
baumannii TCDC-AB0715]
gi|332729896|gb|EGJ61228.1| stringent starvation protein B [Acinetobacter baumannii 6013150]
gi|332733756|gb|EGJ64908.1| stringent starvation protein B [Acinetobacter baumannii 6013113]
gi|332738310|gb|EGJ69186.1| stringent starvation protein B [Acinetobacter baumannii 6014059]
Length = 142
Score = 37.6 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 27/81 (33%)
Query: 91 VIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEK 150
++ + L + ++ F V + + +P A+ G Y L FD
Sbjct: 57 IVPHAVHQLLISNDAITFSARFGGVSKDIYVPIQAVLGIYARENGQGLFFDPEEYANVAP 116
Query: 151 LEGGNTGKVLTSPDNFDKNQT 171
+E + + + K T
Sbjct: 117 VEDKLDSETQETSEPTKKKPT 137
>gi|108759065|ref|YP_630287.1| hypothetical protein MXAN_2058 [Myxococcus xanthus DK 1622]
gi|108462945|gb|ABF88130.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 172
Score = 37.6 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 47/133 (35%), Gaps = 7/133 (5%)
Query: 65 ITFATNARGVRISQNLRKNYPEKMTIVIQNQFW--DLKVLDNHFEVGLSFSNVPERLVIP 122
I GV + +++ + + + +F DL V + LSFS + +P
Sbjct: 24 IHLDARRPGVLVPASVKTE--AHLRLNLSYRFDPPDLTVGEWGVRSTLSFSGSRFTIAVP 81
Query: 123 FNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
++A+ F S + EF ++ E + +L P + + ++
Sbjct: 82 WSAL--FAIAS-HVTKEFWMYPEDMPPELLQQTAASRPAQPLPVAPVPVAAERPRTFLRE 138
Query: 183 STKKQNKNKMASV 195
++ A V
Sbjct: 139 VQGERRDEPPADV 151
>gi|114564464|ref|YP_751978.1| ClpXP protease specificity-enhancing factor [Shewanella
frigidimarina NCIMB 400]
gi|114335757|gb|ABI73139.1| Stringent starvation protein B [Shewanella frigidimarina NCIMB 400]
Length = 156
Score = 37.6 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 36/99 (36%), Gaps = 3/99 (3%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L + ++ E F VP+ + +P +I Y FD+ +EG +
Sbjct: 60 NLHMSNDAVEFNARFGGVPQNVFLPMASIVAIYARENGAGTVFDM---EDAYMIEGEHDE 116
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
P + T+++ S K K + +V+
Sbjct: 117 LSSVPPSMKSVDDTSTLPPSSKSTKPDDKTKRKNHLTVV 155
>gi|325523463|gb|EGD01786.1| ClpXP protease specificity-enhancing factor [Burkholderia sp.
TJI49]
Length = 172
Score = 37.6 bits (86), Expect = 1.00, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 34/124 (27%), Gaps = 3/124 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + + IV+ F L++ + E FS ++ IP + Y
Sbjct: 31 VDNSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKIEIPVANVLAIY 90
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
+ F V E + G T D S + +
Sbjct: 91 ARENGQGMAFQVDAVAGEGEDSGAFDDADETPGDEPGAPAAGLTPVADSGANEEPSEGAD 150
Query: 191 KMAS 194
+
Sbjct: 151 EPPK 154
>gi|148980574|ref|ZP_01816121.1| ClpXP protease specificity-enhancing factor [Vibrionales bacterium
SWAT-3]
gi|145961157|gb|EDK26473.1| ClpXP protease specificity-enhancing factor [Vibrionales bacterium
SWAT-3]
Length = 159
Score = 37.6 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 28/94 (29%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L++ + FS P +++P A++ Y F+ ++E EG G
Sbjct: 58 LELGNEAVTFSARFSGRPHSVIVPLYAVQAIYARENGAGTMFEPEEAYMESFEEGIEEGP 117
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM 192
+ + + + K
Sbjct: 118 FEEPEKGPSLSVATAEPEAEEPDSDPEPPRPAKG 151
>gi|260554065|ref|ZP_05826328.1| stringent starvation protein B family protein [Acinetobacter sp.
RUH2624]
gi|260404804|gb|EEW98311.1| stringent starvation protein B family protein [Acinetobacter sp.
RUH2624]
Length = 142
Score = 37.6 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 27/81 (33%)
Query: 91 VIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEK 150
++ + L + ++ F V + + +P A+ G Y L FD
Sbjct: 57 IVPHAVHQLLISNDAVTFSARFGGVSKDIYVPIQAVLGIYARENGQGLFFDPEEYANVAP 116
Query: 151 LEGGNTGKVLTSPDNFDKNQT 171
+E + + + K T
Sbjct: 117 VENTLDSEAQETSEPTKKKPT 137
>gi|237799275|ref|ZP_04587736.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. oryzae str. 1_6]
gi|237806244|ref|ZP_04592948.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. oryzae str. 1_6]
gi|331022131|gb|EGI02188.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. oryzae str. 1_6]
gi|331027358|gb|EGI07413.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. oryzae str. 1_6]
Length = 136
Score = 37.6 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 27/81 (33%), Gaps = 1/81 (1%)
Query: 97 WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE-EKLEGGN 155
L + + F VP L +P AI G Y + FD+ E + +E +
Sbjct: 56 RHLHMDNEAVSFEGRFGGVPHTLFVPVAAILGIYARENGQGMVFDLEPSMEEADDVEIED 115
Query: 156 TGKVLTSPDNFDKNQTNSVSQ 176
+ P + V +
Sbjct: 116 DTPPDSEPPRPSGRPSLKVVK 136
>gi|123443921|ref|YP_001007892.1| ClpXP protease specificity-enhancing factor [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122090882|emb|CAL13764.1| putative stringent starvation protein B [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 171
Score = 37.6 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 26/102 (25%), Gaps = 6/102 (5%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKL------ 151
+L++ + F +P + +P A+ Y F+ + +
Sbjct: 62 NLELGNEGVSFNARFGGIPCEVTVPMGAVMAIYARENGSGTMFEPEEAYDSDADGNFVGM 121
Query: 152 EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
E + T + T + D Q
Sbjct: 122 EEEDDETTPTENLMLVTDDTQAPQGDGGSPDDEPPQPPRSGG 163
>gi|253997999|ref|YP_003050062.1| Stringent starvation protein B [Methylovorus sp. SIP3-4]
gi|253984678|gb|ACT49535.1| Stringent starvation protein B [Methylovorus sp. SIP3-4]
Length = 139
Score = 37.6 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 48/139 (34%), Gaps = 14/139 (10%)
Query: 43 LVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFW---DL 99
L++ V G P H +T V + + Y + IV+ + DL
Sbjct: 11 LIRAVHEWCVDNGFTP---HLLVT-------VDENTRVPMAYVKNGEIVLNINYSATKDL 60
Query: 100 KVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV-HIEHIEEKLEGGNTGK 158
+ + FS + + +P A++G + + + F+ +E +++
Sbjct: 61 VIDNTAISFSARFSGASQNIYVPIGAVRGIFARENSQGMFFEAEPVEDKPDQVSQSEAVG 120
Query: 159 VLTSPDNFDKNQTNSVSQD 177
+P K V +D
Sbjct: 121 KPQAPKEVKKPSLTLVKKD 139
>gi|169634297|ref|YP_001708033.1| ClpXP protease specificity-enhancing factor [Acinetobacter
baumannii SDF]
gi|169153089|emb|CAP02159.1| stringent starvation protein B [Acinetobacter baumannii]
Length = 142
Score = 37.6 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 27/81 (33%)
Query: 91 VIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEK 150
++ + L + ++ F V + + +P A+ G Y L FD
Sbjct: 57 IVPHAVHQLLISNDAITFSARFGGVSKDIYVPIQAVLGIYARENGQGLFFDPEEYANVAP 116
Query: 151 LEGGNTGKVLTSPDNFDKNQT 171
+E + + + K T
Sbjct: 117 VEDKLDSEKQETSEPTKKKPT 137
>gi|9506813|ref|NP_062184.1| phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 1 [Rattus
norvegicus]
gi|81861707|sp|P97573|SHIP1_RAT RecName: Full=Phosphatidylinositol-3,4,5-trisphosphate
5-phosphatase 1; AltName: Full=SH2 domain-containing
inositol-5'-phosphatase 1; Short=SH2 domain-containing
inositol phosphatase 1; Short=SHIP-1
gi|1777942|gb|AAB40610.1| inositol polyphosphate 5' phosphatase Ship [Rattus norvegicus]
Length = 1190
Score = 37.6 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 31/107 (28%), Gaps = 6/107 (5%)
Query: 96 FWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFEL----EFDVHIEHIEEKL 151
+ L D+ F V S VP R + + FY N L +F V +E +
Sbjct: 56 YRILPNEDDKFTVQAS-EGVPMRFFTKLDQLIEFYKKE-NMGLVTHLQFPVPLEEEDAID 113
Query: 152 EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISL 198
E + + SP K + V L
Sbjct: 114 EPEEDTESVMSPPELPPRNIPVSGGPCEAKDLPLPTENPRAPEVTRL 160
>gi|157373944|ref|YP_001472544.1| ClpXP protease specificity-enhancing factor [Shewanella sediminis
HAW-EB3]
gi|157316318|gb|ABV35416.1| stringent starvation protein B [Shewanella sediminis HAW-EB3]
Length = 152
Score = 37.2 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 7/113 (6%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
G ++ Q Y + IV+ + +L++ + E F VP+++V+P AI
Sbjct: 35 PGTQVPQ----QYVKDGQIVLNITASAVGNLQIGHDFIEFSARFGGVPQQVVLPMAAIVA 90
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKK 181
Y FD+ + E V+ + T Q K
Sbjct: 91 IYARENGAGTVFDMEEAYQLEDESVEAGLTVVEEATEEEPVLTEEAPQAPEPK 143
>gi|162418866|ref|YP_001605677.1| ClpXP protease specificity-enhancing factor [Yersinia pestis
Angola]
gi|165937550|ref|ZP_02226113.1| stringent starvation protein B [Yersinia pestis biovar Orientalis
str. IP275]
gi|167420535|ref|ZP_02312288.1| stringent starvation protein B [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|294505317|ref|YP_003569379.1| stringent starvation protein B [Yersinia pestis Z176003]
gi|162351681|gb|ABX85629.1| stringent starvation protein B [Yersinia pestis Angola]
gi|165914655|gb|EDR33269.1| stringent starvation protein B [Yersinia pestis biovar Orientalis
str. IP275]
gi|166961341|gb|EDR57362.1| stringent starvation protein B [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|262367242|gb|ACY63799.1| stringent starvation protein B [Yersinia pestis D182038]
gi|294355776|gb|ADE66117.1| stringent starvation protein B [Yersinia pestis Z176003]
Length = 166
Score = 37.2 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 29/102 (28%), Gaps = 6/102 (5%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVH------IEHIEEKL 151
+L++ ++ F VP ++ +P A+ Y F+ + E +
Sbjct: 57 NLELSNDDVRFNARFGGVPRQVTVPIAAVMAIYARENGSGTMFEPEAAYDADADGNFEGI 116
Query: 152 EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
EG T + T D + Q
Sbjct: 117 EGKENETAPTESLMLVTDDTRVEQDDDNSPDDKPPQPPRSGG 158
>gi|310823430|ref|YP_003955788.1| stringent starvation family protein b [Stigmatella aurantiaca
DW4/3-1]
gi|309396502|gb|ADO73961.1| Stringent starvation family protein B [Stigmatella aurantiaca
DW4/3-1]
Length = 178
Score = 37.2 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 68 ATNARGVRISQNLRKNYPEKMTIVIQNQFW--DLKVLDNHFEVGLSFSNVPERLVIPFNA 125
GV + +LR + + I +F DL V + LSFS + +P++A
Sbjct: 26 DARRPGVLVPPHLRNE--AHLRLNISYRFDPPDLAVGEWGVRSTLSFSGSRFTVAVPWSA 83
Query: 126 I 126
+
Sbjct: 84 L 84
>gi|254253431|ref|ZP_04946749.1| stringent starvation protein B [Burkholderia dolosa AUO158]
gi|124896040|gb|EAY69920.1| stringent starvation protein B [Burkholderia dolosa AUO158]
Length = 174
Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 39/123 (31%), Gaps = 3/123 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + + IV+ F L++ + E FS ++ IP + Y
Sbjct: 32 VDNSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKIEIPVANVLAIY 91
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
+ F V E + G T + +++T++ + + +
Sbjct: 92 ARENGQGMAFQVDAVAGEGEDSGTFEDDADTQEQDAQRDETSAALDSADDGANEEPSEGA 151
Query: 191 KMA 193
Sbjct: 152 DEP 154
>gi|153949576|ref|YP_001399456.1| ClpXP protease specificity-enhancing factor [Yersinia
pseudotuberculosis IP 31758]
gi|152961071|gb|ABS48532.1| stringent starvation protein B [Yersinia pseudotuberculosis IP
31758]
Length = 171
Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 29/102 (28%), Gaps = 6/102 (5%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIE------EKL 151
+L++ ++ F VP ++ +P A+ Y F+ + E +
Sbjct: 62 NLELSNDDVRFNARFGGVPRQVTVPIAAVMAIYARENGSGTMFEPEAAYDSDADGNFEGI 121
Query: 152 EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
EG T + T D + Q
Sbjct: 122 EGKENETAPTESLMLVTDDTRVEQDDDNSPDDKPPQPPRSGG 163
>gi|22124051|ref|NP_667474.1| ClpXP protease specificity-enhancing factor [Yersinia pestis KIM
10]
gi|45443545|ref|NP_995084.1| ClpXP protease specificity-enhancing factor [Yersinia pestis biovar
Microtus str. 91001]
gi|51597797|ref|YP_071988.1| ClpXP protease specificity-enhancing factor [Yersinia
pseudotuberculosis IP 32953]
gi|108809734|ref|YP_653650.1| ClpXP protease specificity-enhancing factor [Yersinia pestis
Antiqua]
gi|108813602|ref|YP_649369.1| ClpXP protease specificity-enhancing factor [Yersinia pestis
Nepal516]
gi|145597653|ref|YP_001161729.1| ClpXP protease specificity-enhancing factor [Yersinia pestis
Pestoides F]
gi|153997335|ref|ZP_02022435.1| putative stringent starvation protein B [Yersinia pestis CA88-4125]
gi|165928136|ref|ZP_02223968.1| stringent starvation protein B [Yersinia pestis biovar Orientalis
str. F1991016]
gi|166011328|ref|ZP_02232226.1| stringent starvation protein B [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212232|ref|ZP_02238267.1| stringent starvation protein B [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167400524|ref|ZP_02306033.1| stringent starvation protein B [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167426968|ref|ZP_02318721.1| stringent starvation protein B [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167469335|ref|ZP_02334039.1| ClpXP protease specificity-enhancing factor [Yersinia pestis FV-1]
gi|170022778|ref|YP_001719283.1| ClpXP protease specificity-enhancing factor [Yersinia
pseudotuberculosis YPIII]
gi|186896988|ref|YP_001874100.1| ClpXP protease specificity-enhancing factor [Yersinia
pseudotuberculosis PB1/+]
gi|218930572|ref|YP_002348447.1| ClpXP protease specificity-enhancing factor [Yersinia pestis CO92]
gi|229837080|ref|ZP_04457245.1| ClpXP protease specificity-enhancing factor [Yersinia pestis
Pestoides A]
gi|229839216|ref|ZP_04459375.1| ClpXP protease specificity-enhancing factor [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229899781|ref|ZP_04514922.1| ClpXP protease specificity-enhancing factor [Yersinia pestis biovar
Orientalis str. India 195]
gi|229904096|ref|ZP_04519207.1| ClpXP protease specificity-enhancing factor [Yersinia pestis
Nepal516]
gi|270488530|ref|ZP_06205604.1| stringent starvation protein B [Yersinia pestis KIM D27]
gi|21956797|gb|AAM83725.1|AE013613_5 stringent starvation protein B [Yersinia pestis KIM 10]
gi|45438414|gb|AAS63961.1| putative stringent starvation protein B [Yersinia pestis biovar
Microtus str. 91001]
gi|51591079|emb|CAH22743.1| putative stringent starvation protein B [Yersinia
pseudotuberculosis IP 32953]
gi|108777250|gb|ABG19769.1| stringent starvation protein B [Yersinia pestis Nepal516]
gi|108781647|gb|ABG15705.1| putative stringent starvation protein B [Yersinia pestis Antiqua]
gi|115349183|emb|CAL22148.1| putative stringent starvation protein B [Yersinia pestis CO92]
gi|145209349|gb|ABP38756.1| stringent starvation protein B [Yersinia pestis Pestoides F]
gi|149288972|gb|EDM39052.1| putative stringent starvation protein B [Yersinia pestis CA88-4125]
gi|165919910|gb|EDR37211.1| stringent starvation protein B [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989712|gb|EDR42013.1| stringent starvation protein B [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166206978|gb|EDR51458.1| stringent starvation protein B [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167049892|gb|EDR61300.1| stringent starvation protein B [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054008|gb|EDR63836.1| stringent starvation protein B [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169749312|gb|ACA66830.1| Stringent starvation protein B [Yersinia pseudotuberculosis YPIII]
gi|186700014|gb|ACC90643.1| Stringent starvation protein B [Yersinia pseudotuberculosis PB1/+]
gi|229678214|gb|EEO74319.1| ClpXP protease specificity-enhancing factor [Yersinia pestis
Nepal516]
gi|229687273|gb|EEO79348.1| ClpXP protease specificity-enhancing factor [Yersinia pestis biovar
Orientalis str. India 195]
gi|229695582|gb|EEO85629.1| ClpXP protease specificity-enhancing factor [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706023|gb|EEO92032.1| ClpXP protease specificity-enhancing factor [Yersinia pestis
Pestoides A]
gi|262363380|gb|ACY60101.1| putative stringent starvation protein B [Yersinia pestis D106004]
gi|270337034|gb|EFA47811.1| stringent starvation protein B [Yersinia pestis KIM D27]
gi|320017102|gb|ADW00674.1| ClpXP protease specificity-enhancing factor [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 171
Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 29/102 (28%), Gaps = 6/102 (5%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVH------IEHIEEKL 151
+L++ ++ F VP ++ +P A+ Y F+ + E +
Sbjct: 62 NLELSNDDVRFNARFGGVPRQVTVPIAAVMAIYARENGSGTMFEPEAAYDADADGNFEGI 121
Query: 152 EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
EG T + T D + Q
Sbjct: 122 EGKENETAPTESLMLVTDDTRVEQDDDNSPDDKPPQPPRSGG 163
>gi|83648536|ref|YP_436971.1| ClpXP protease specificity-enhancing factor [Hahella chejuensis
KCTC 2396]
gi|83636579|gb|ABC32546.1| Stringent starvation protein B [Hahella chejuensis KCTC 2396]
Length = 140
Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 42/120 (35%), Gaps = 5/120 (4%)
Query: 60 EHHF--YITFATNARGVRISQNLRKNYPEKMTIVIQNQ-FWDLKVLDNHFEVGLSFSNVP 116
++H Y+ + +GV + ++ N ++ + I Q L + +++ E F VP
Sbjct: 18 DNHLTPYVVVDASLQGVDVPRDFVSN--GQIVLNISPQAVRGLSIGNDYLEFSARFGGVP 75
Query: 117 ERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQ 176
++ +P A+ Y + F E + +P + S
Sbjct: 76 RQVSVPVMAVLAIYAKENGQGMVFGSEPGGAPEPPGSKSKPGSSPAPPPKGGGRDGSKPS 135
>gi|167587676|ref|ZP_02380064.1| ClpXP protease specificity-enhancing factor [Burkholderia ubonensis
Bu]
Length = 173
Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 39/122 (31%), Gaps = 3/122 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + + IV+ F L++ + E FS +L IP + Y
Sbjct: 31 VDNSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKLEIPVANVLAIY 90
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
+ F V + G G+ + D ++ + + ++ ++
Sbjct: 91 ARENGQGMAFQVEAVAEDGPDSGEFEGEAHADEQHGDARGASAGLTPVADSGANEEPSEG 150
Query: 191 KM 192
Sbjct: 151 AD 152
>gi|330815341|ref|YP_004359046.1| Stringent starvation protein B [Burkholderia gladioli BSR3]
gi|327367734|gb|AEA59090.1| Stringent starvation protein B [Burkholderia gladioli BSR3]
Length = 166
Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 36/124 (29%), Gaps = 3/124 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFWD---LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + Y IV+ F L++ + E FS +L +P + Y
Sbjct: 31 VDNSTRVPRQYVRDGEIVLNISFEATSALQMGNEWIEFTARFSGKAHKLEVPVANVLAIY 90
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
+ F V E +P + D+ + + +
Sbjct: 91 ARENGQGMAFQVDATADEPGESAIEDDVAEAAPASADEAAREAAEPSEGADVPASSPDDD 150
Query: 191 KMAS 194
AS
Sbjct: 151 GGAS 154
>gi|332163065|ref|YP_004299642.1| ClpXP protease specificity-enhancing factor [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|318604055|emb|CBY25553.1| stringent starvation protein B [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325667295|gb|ADZ43939.1| ClpXP protease specificity-enhancing factor [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 166
Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 26/102 (25%), Gaps = 6/102 (5%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKL------ 151
+L++ + F +P + +P A+ Y F+ + +
Sbjct: 57 NLELGNEGVSFNARFGGIPCEVTVPMGAVMAIYARENGSGTMFEPEEAYDSDADGNFVGM 116
Query: 152 EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
E + T + T D S Q
Sbjct: 117 EEEDDETTPTENLMLVTDDTQGPQGDGSSPDDEPPQPPRSGG 158
>gi|115372785|ref|ZP_01460091.1| stringent starvation protein B [Stigmatella aurantiaca DW4/3-1]
gi|115370266|gb|EAU69195.1| stringent starvation protein B [Stigmatella aurantiaca DW4/3-1]
Length = 157
Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 68 ATNARGVRISQNLRKNYPEKMTIVIQNQFW--DLKVLDNHFEVGLSFSNVPERLVIPFNA 125
GV + +LR + + I +F DL V + LSFS + +P++A
Sbjct: 5 DARRPGVLVPPHLRNE--AHLRLNISYRFDPPDLAVGEWGVRSTLSFSGSRFTVAVPWSA 62
Query: 126 I 126
+
Sbjct: 63 L 63
>gi|330862738|emb|CBX72880.1| stringent starvation protein B [Yersinia enterocolitica W22703]
Length = 171
Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 26/102 (25%), Gaps = 6/102 (5%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKL------ 151
+L++ + F +P + +P A+ Y F+ + +
Sbjct: 62 NLELGNEGVSFNARFGGIPCEVTVPMGAVMAIYARENGSGTMFEPEEAYDSDADGNFVGM 121
Query: 152 EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
E + T + T D S Q
Sbjct: 122 EEEDDETTPTENLMLVTDDTQGPQGDGSSPDDEPPQPPRSGG 163
>gi|268590727|ref|ZP_06124948.1| stringent starvation protein B [Providencia rettgeri DSM 1131]
gi|291313498|gb|EFE53951.1| stringent starvation protein B [Providencia rettgeri DSM 1131]
Length = 164
Score = 37.2 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 32/101 (31%), Gaps = 2/101 (1%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+ ++ + F +P ++ +P AI Y + F+ + E G
Sbjct: 63 NFEITNEEVRFNARFGGIPRQVYVPMAAIMAVYARENGAGMMFEPEAAYDAELSAGFEQV 122
Query: 158 KVLTSPDN--FDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
+ L + + + S + S + + V+
Sbjct: 123 EELEDNISLVHETESVDENSHEPSGDEPPRPPKGRPSLRVV 163
>gi|229588390|ref|YP_002870509.1| ClpXP protease specificity-enhancing factor [Pseudomonas
fluorescens SBW25]
gi|229360256|emb|CAY47113.1| stringent starvation protein B [Pseudomonas fluorescens SBW25]
Length = 139
Score = 37.2 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 27/79 (34%)
Query: 97 WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNT 156
L + + F VP L +P AI G Y + FD+ E++
Sbjct: 56 RHLHMDNEAVSFEGRFGGVPHTLYVPIGAILGIYARENGQGMVFDLESPFEEDEAIESEA 115
Query: 157 GKVLTSPDNFDKNQTNSVS 175
G L PD+ + S
Sbjct: 116 GDDLPPPDSEPPRPSGRPS 134
>gi|163854422|ref|YP_001628720.1| ClpXP protease specificity-enhancing factor [Bordetella petrii DSM
12804]
gi|163258150|emb|CAP40449.1| sspB [Bordetella petrii]
Length = 147
Score = 37.2 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 25/89 (28%), Gaps = 6/89 (6%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L + + E FS V E + +P A+ Y + F+V E
Sbjct: 59 LVLGNEFIEFQARFSGVTENVSVPVAAVSAIYARETGAGMGFEVQPY------EAPRRED 112
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKSTKKQ 187
P + S D K+
Sbjct: 113 AAVDPSAAETAGEASTPSDDGGDDEPKRP 141
>gi|319427714|gb|ADV55788.1| Stringent starvation protein B [Shewanella putrefaciens 200]
Length = 145
Score = 37.2 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 27/77 (35%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ + E F VP+++++P +I Y FDV ++ E
Sbjct: 60 NLQISNEFVEFNARFGGVPQQVLLPMASIIAIYARENGAGTVFDVEDAYLMEDEAESVLS 119
Query: 158 KVLTSPDNFDKNQTNSV 174
V + D
Sbjct: 120 VVDVTDKPKDPTDQPPK 136
>gi|262377465|ref|ZP_06070687.1| stringent starvation protein B [Acinetobacter lwoffii SH145]
gi|262307521|gb|EEY88662.1| stringent starvation protein B [Acinetobacter lwoffii SH145]
Length = 142
Score = 37.2 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 24/81 (29%)
Query: 91 VIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEK 150
++ + L + ++ F V + +P A+ G Y L FD +
Sbjct: 57 IVPHAVHALHMSNDAISFSARFGGVSRDIYVPMAAVLGIYARENGQGLFFDPGEYEHTQN 116
Query: 151 LEGGNTGKVLTSPDNFDKNQT 171
E + K T
Sbjct: 117 DEDALKSSTEEQTEQPKKKPT 137
>gi|301793368|emb|CBW35732.1| beta-N-acetylhexosaminidase precursor (ec 3.2.1.52)
(sortase-sorted) [Streptococcus pneumoniae INV104]
Length = 1312
Score = 37.2 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEDDKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|254775171|ref|ZP_05216687.1| haloacid dehalogenase, type II [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 229
Score = 36.8 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 13/92 (14%)
Query: 14 WFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARG 73
W ++ W D L ++ L L +A G LP + FA G
Sbjct: 93 WQRLVPWPDVLPGLTRLK-KKFIIATLSNADVSALINIAKRGGLPWDA----VFAAEMAG 147
Query: 74 VRISQ----NLRKNY----PEKMTIVIQNQFW 97
V ++ Y P ++ +V +++
Sbjct: 148 VFKPDPAIYHMAARYLGLAPRQIMMVASHKYD 179
>gi|120597500|ref|YP_962074.1| ClpXP protease specificity-enhancing factor [Shewanella sp.
W3-18-1]
gi|120557593|gb|ABM23520.1| Stringent starvation protein B [Shewanella sp. W3-18-1]
Length = 145
Score = 36.8 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 27/77 (35%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ + E F VP+++++P +I Y FDV ++ E
Sbjct: 60 NLQISNEFVEFNARFGGVPQQVLLPMASIIAIYARENGAGTVFDVEDAYLMEDEAESVLS 119
Query: 158 KVLTSPDNFDKNQTNSV 174
V + D
Sbjct: 120 VVDVTDKPKDPTDQPPK 136
>gi|300313331|ref|YP_003777423.1| stringent starvation B protein [Herbaspirillum seropedicae SmR1]
gi|300076116|gb|ADJ65515.1| stringent starvation B protein [Herbaspirillum seropedicae SmR1]
Length = 165
Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 35/114 (30%), Gaps = 7/114 (6%)
Query: 90 IVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF----DV 142
IV+ F LK+ +++ F V ++IP + Y + F
Sbjct: 47 IVLNISFEATSGLKMENDNIHFSARFGGVSRDILIPVENVIAIYARENGQGMAFEAPAPA 106
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
E ++E + ++ S DS +K + K +
Sbjct: 107 TAEAVQESDAPQEPESSAPVLSSVPVSEPEKKSADSEEKGDDDPEPPKKGGRPV 160
>gi|253995703|ref|YP_003047767.1| Stringent starvation protein B [Methylotenera mobilis JLW8]
gi|253982382|gb|ACT47240.1| Stringent starvation protein B [Methylotenera mobilis JLW8]
Length = 142
Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 30/71 (42%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
DL + ++ F V + + +P +A++G + + F+ +E E + +
Sbjct: 59 DLHIDNDSVVFSARFGGVSQNIYVPMSAVRGVFARENGQGMFFEADLEQEEVQFSADHAE 118
Query: 158 KVLTSPDNFDK 168
+ +N ++
Sbjct: 119 EDAKPAENKEE 129
>gi|226954486|ref|ZP_03824950.1| stringent starvation protein B [Acinetobacter sp. ATCC 27244]
gi|294651502|ref|ZP_06728815.1| stringent starvation protein B [Acinetobacter haemolyticus ATCC
19194]
gi|226834835|gb|EEH67218.1| stringent starvation protein B [Acinetobacter sp. ATCC 27244]
gi|292822652|gb|EFF81542.1| stringent starvation protein B [Acinetobacter haemolyticus ATCC
19194]
Length = 141
Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 23/78 (29%), Gaps = 3/78 (3%)
Query: 94 NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEG 153
+Q L + + F V + + +P A+ G Y L FD E
Sbjct: 62 HQ---LHISNEAITFSARFGGVAKEIYVPIRAVLGIYAKENGQGLFFDPSEYADIEDTIS 118
Query: 154 GNTGKVLTSPDNFDKNQT 171
+ + K +
Sbjct: 119 TANEESQQKAETTKKKPS 136
>gi|313200067|ref|YP_004038725.1| stringent starvation protein b [Methylovorus sp. MP688]
gi|312439383|gb|ADQ83489.1| Stringent starvation protein B [Methylovorus sp. MP688]
Length = 139
Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV-HIEHIEEKLEGGNT 156
DL + + FS + + +P A++G + + + F+ +E +++
Sbjct: 59 DLVIDNTAISFSARFSGASQNIYVPIGAVRGIFARENSQGMFFEAEPVEDKPDQVSQSEA 118
Query: 157 GKVLTSPDNFDKNQTNSVSQD 177
+ +P K V +D
Sbjct: 119 VEKPQAPKEVKKPSLTLVKKD 139
>gi|329298212|ref|ZP_08255548.1| ClpXP protease specificity-enhancing factor [Plautia stali
symbiont]
Length = 161
Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 12/99 (12%), Positives = 29/99 (29%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ ++ F VP ++ +P A+ Y F+ + E +
Sbjct: 62 NLELANDQVRFNARFGGVPRQVSVPMAAVLAIYARENGAGTMFEPEPAYELSGDEQEGSQ 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
+ ++ D S + V+
Sbjct: 122 EETLVSVIDGDRPDDATDDDCSPDDEPPPRGGRPSLRVV 160
>gi|314924292|gb|EFS88123.1| glycosyltransferase, group 2 family protein [Propionibacterium
acnes HL001PA1]
Length = 340
Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 46/147 (31%), Gaps = 28/147 (19%)
Query: 80 LRKNYPEKMTIVI-------------QNQFWDLKVLDNHFEVGLSFSNV-PERL-----V 120
L + YP M I++ Q DL V D+ V + P+ L V
Sbjct: 30 LNQGYPGPMEIILAIAPSTDRTAEIAQ----DLAVRDDRIRVIDNPDGTTPKALNLGVAV 85
Query: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDS-- 178
++ I D E+ + E+ N G ++ + Q +V+ S
Sbjct: 86 SQYDIIVR-VDAHGELGPEYIATAVELLERTGAANVGGIMDAKGRTPFEQAVAVAYTSKL 144
Query: 179 --SKKKSTKKQNKNKMASVISLDNFRK 203
+ A + L FRK
Sbjct: 145 GLGNSAFHQGDAPEGPAETVFLGAFRK 171
>gi|254509128|ref|ZP_05121228.1| stringent starvation protein B [Vibrio parahaemolyticus 16]
gi|219547925|gb|EED24950.1| stringent starvation protein B [Vibrio parahaemolyticus 16]
Length = 146
Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 12/99 (12%), Positives = 34/99 (34%), Gaps = 3/99 (3%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ + F P +++P A++ Y F+ +I E E
Sbjct: 50 NLELGNEAITFNARFGGRPHSVIVPLYAVQAIYARENGAGTMFEPEDAYIGEFEE---DD 106
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
+++ D + + + + ++ + V+
Sbjct: 107 EMIVEEDLSPLSVASESEDNDTGEEEPPRPKGRPSLRVV 145
>gi|118464503|ref|YP_881881.1| haloacid dehalogenase, type II [Mycobacterium avium 104]
gi|118165790|gb|ABK66687.1| haloacid dehalogenase, type II [Mycobacterium avium 104]
Length = 240
Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 13/92 (14%)
Query: 14 WFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARG 73
W ++ W D L ++ L L +A G LP + FA G
Sbjct: 104 WQRLVPWPDVLPGLTRLK-KKFIIATLSNADVSALINIAKRGGLPWDA----VFAAEMAG 158
Query: 74 VRISQ----NLRKNY----PEKMTIVIQNQFW 97
V ++ Y P ++ +V +++
Sbjct: 159 VFKPDPAIYHMAARYLGLAPRQIMMVASHKYD 190
>gi|330501909|ref|YP_004378778.1| ClpXP protease specificity-enhancing factor [Pseudomonas mendocina
NK-01]
gi|328916195|gb|AEB57026.1| ClpXP protease specificity-enhancing factor [Pseudomonas mendocina
NK-01]
Length = 137
Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 30/107 (28%), Gaps = 7/107 (6%)
Query: 70 NARGVRISQNLRKNYPEKMTIVIQNQ---FWDLKVLDNHFEVGLSFSNVPERLVIPFNAI 126
GV++ + IV+ + L + + F V L IP AI
Sbjct: 30 EHPGVQVPSG----FASDGQIVLNSSPSAVRHLHMDNEAVSFEGRFGGVAHSLYIPTAAI 85
Query: 127 KGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNS 173
Y + FD+ E G + + + S
Sbjct: 86 LAIYARENGQGMVFDMEPPVAGGPEESGPDDDGPSGGEPPRPSGRPS 132
>gi|88799200|ref|ZP_01114779.1| stringent starvation protein B [Reinekea sp. MED297]
gi|88777959|gb|EAR09155.1| stringent starvation protein B [Reinekea sp. MED297]
Length = 133
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTI-VIQNQFWDLKVLDNHFEVGLSFSNVPERLVIP 122
YI F GV++ Q+ ++ ++T+ + DL++ ++ F VP +V P
Sbjct: 27 YIVFMAEYPGVQVPQDFVRD--GQITLNIAPTAVRDLQLANDVVSFNARFGGVPTDIVGP 84
Query: 123 FNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFD 167
+A+ + + F +E E EGG+ ++P
Sbjct: 85 VDAVMAIFAKENGQGMGF--EVEMPPEPPEGGSDEDQDSAPPKRP 127
>gi|320539426|ref|ZP_08039095.1| putative ClpXP protease specificity-enhancing factor [Serratia
symbiotica str. Tucson]
gi|320030551|gb|EFW12561.1| putative ClpXP protease specificity-enhancing factor [Serratia
symbiotica str. Tucson]
Length = 155
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 10/117 (8%)
Query: 71 ARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIK 127
GV++ + IV+ + +L++ D+ F VP ++ +P A++
Sbjct: 31 CPGVQVP----MEFARDGQIVLNIAPHAVGNLELGDDEVRFNARFGGVPRQVSVPMAAVQ 86
Query: 128 GFYDPSVNFELEFDVHIEHIEE---KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKK 181
Y F+ + E + T V + D N+ + D
Sbjct: 87 AIYARENGAGSLFEPEAAYAVEGTIESLDNKTNPVESLISVVDSNRPETSDGDEPPP 143
>gi|83718527|ref|YP_443477.1| ClpXP protease specificity-enhancing factor [Burkholderia
thailandensis E264]
gi|83652352|gb|ABC36415.1| stringent starvation protein B [Burkholderia thailandensis E264]
Length = 170
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 3/121 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + + IV+ F L++ + E FS ++ +P + Y
Sbjct: 31 VDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKIEVPVANVLAIY 90
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
+ F V + EGG+ + + +++ +
Sbjct: 91 ARENGQGMAFQVDVVAETGDAEGGDGLAAAEEGGDAGTHAAPDAVIEAASESDEPADELP 150
Query: 191 K 191
K
Sbjct: 151 K 151
>gi|187479803|ref|YP_787828.1| ClpXP protease specificity-enhancing factor [Bordetella avium 197N]
gi|115424390|emb|CAJ50943.1| stringent starvation protein B [Bordetella avium 197N]
Length = 145
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 28/81 (34%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L + + E FS V E +++P A+ Y + F+V + E G+
Sbjct: 59 LLLGNEFIEFQARFSGVTENVMVPVQAVSAIYARETGAGMGFEVQPYEPAVREEAAQEGE 118
Query: 159 VLTSPDNFDKNQTNSVSQDSS 179
+S D + +
Sbjct: 119 SQSSADTPAPAEDSPADTKRP 139
>gi|257137738|ref|ZP_05586000.1| ClpXP protease specificity-enhancing factor [Burkholderia
thailandensis E264]
Length = 172
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 3/121 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + + IV+ F L++ + E FS ++ +P + Y
Sbjct: 33 VDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKIEVPVANVLAIY 92
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
+ F V + EGG+ + + +++ +
Sbjct: 93 ARENGQGMAFQVDVVAETGDAEGGDGLAAAEEGGDAGTHAAPDAVIEAASESDEPADELP 152
Query: 191 K 191
K
Sbjct: 153 K 153
>gi|330811594|ref|YP_004356056.1| Stringent starvation protein B [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379702|gb|AEA71052.1| Stringent starvation protein B [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 137
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 20/55 (36%)
Query: 97 WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKL 151
L + ++ F VP L +P AI G Y + F++ E+
Sbjct: 56 RHLHMDNDAVSFEGRFGGVPHTLYVPIAAILGIYARENGQGMVFELEAPLDGEEE 110
>gi|24372203|ref|NP_716245.1| ClpXP protease specificity-enhancing factor [Shewanella oneidensis
MR-1]
gi|24346115|gb|AAN53690.1|AE015508_6 stringent starvation protein b [Shewanella oneidensis MR-1]
Length = 145
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 28/77 (36%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ + E F VP+++++P +I Y FD+ ++ E
Sbjct: 60 NLQISNEFVEFNARFGGVPQQVLLPMASIVAIYARENGAGTVFDIEDAYLVEDEAESTLS 119
Query: 158 KVLTSPDNFDKNQTNSV 174
+ T+ +
Sbjct: 120 VIETAEKPTEPKDEPPK 136
>gi|90413024|ref|ZP_01221022.1| putative stringent starvation protein B [Photobacterium profundum
3TCK]
gi|90326039|gb|EAS42478.1| putative stringent starvation protein B [Photobacterium profundum
3TCK]
Length = 168
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 37/109 (33%), Gaps = 13/109 (11%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIK----------GFYDPSVNFELEFDVHIEHI 147
+L++ + FS P +++P A+ +DP + + D E+
Sbjct: 62 NLELGNEAVSFNARFSGRPHAVIVPMYAVVAIYARENGAGTMFDPEPAYATDLDAFDENE 121
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
E +++G + + T +S D+ + V+
Sbjct: 122 EAEIDGIVE---VQAETLAPVAVTAEISDDNEPDDEPPRPRGRPSLRVV 167
>gi|261856116|ref|YP_003263399.1| stringent starvation protein B [Halothiobacillus neapolitanus c2]
gi|261836585|gb|ACX96352.1| Stringent starvation protein B [Halothiobacillus neapolitanus c2]
Length = 175
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 1/73 (1%)
Query: 112 FSNVPERLVIPFNAIKGFYDPSVNFELEFDV-HIEHIEEKLEGGNTGKVLTSPDNFDKNQ 170
F E + +P A+ G YD +F E + + ++ L+ D
Sbjct: 71 FGGKAESIFVPMRAVVGIYDRDSGSGAQFPPEPDEEFMDDDDAQDSAPKLSLADTGKVQT 130
Query: 171 TNSVSQDSSKKKS 183
VS + S
Sbjct: 131 LRRVSDNRSSDAD 143
>gi|262369193|ref|ZP_06062521.1| stringent starvation protein B family protein [Acinetobacter
johnsonii SH046]
gi|262315261|gb|EEY96300.1| stringent starvation protein B family protein [Acinetobacter
johnsonii SH046]
Length = 143
Score = 36.5 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 28/93 (30%), Gaps = 3/93 (3%)
Query: 82 KNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFEL 138
+ + + IV+ + L + ++ F V + +P NA+ G Y L
Sbjct: 45 EQFIQDGQIVLNIVPHAVHALHMSNDAITFSARFGGVSRDIYVPLNAVIGIYARENGQGL 104
Query: 139 EFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQT 171
FD + E K +
Sbjct: 105 FFDPSEYDNHTQSEQNALKSDNEEKTEPAKKKP 137
>gi|312885187|ref|ZP_07744866.1| ClpXP protease specificity-enhancing factor [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309367127|gb|EFP94700.1| ClpXP protease specificity-enhancing factor [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 157
Score = 36.5 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 36/91 (39%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ ++ FS P +++P A++ Y F+ + +E +EG
Sbjct: 62 NLELGNDAVMFNARFSGRPHSIIVPMYAVQAIYARENGAGTMFEPEEVYEQEDIEGIENA 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQN 188
S + ++ ++S D + K +
Sbjct: 122 TNSISIASDVEDASDSQDPDDEPPRPRGKPS 152
>gi|262281593|ref|ZP_06059371.1| stringent starvation protein B family protein [Acinetobacter
calcoaceticus RUH2202]
gi|262256969|gb|EEY75709.1| stringent starvation protein B family protein [Acinetobacter
calcoaceticus RUH2202]
Length = 143
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 25/81 (30%)
Query: 91 VIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEK 150
++ + L + + F + + +P A+ G Y L FD
Sbjct: 57 IVPHAVHQLLIANESITFSARFGGASKDIYVPIQAVLGIYARENGQGLFFDPEEYANVAP 116
Query: 151 LEGGNTGKVLTSPDNFDKNQT 171
+E +V + K +
Sbjct: 117 VENTVEPEVQEADTTSTKKKP 137
>gi|167896130|ref|ZP_02483532.1| ClpXP protease specificity-enhancing factor [Burkholderia
pseudomallei 7894]
Length = 169
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 39/124 (31%), Gaps = 3/124 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + + IV+ F L++ + E FS +L +P + Y
Sbjct: 31 VDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKLEVPVANVLAIY 90
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
+ F V + + +G + V D+ ++ + + +
Sbjct: 91 ARENGQGMAFQVDVAAETGEADGSDALAVAEEGDDAGARHASADGAAEAAPEPGDAAEEL 150
Query: 191 KMAS 194
+
Sbjct: 151 PKSD 154
>gi|262371635|ref|ZP_06064914.1| stringent starvation protein B [Acinetobacter junii SH205]
gi|262311660|gb|EEY92745.1| stringent starvation protein B [Acinetobacter junii SH205]
Length = 141
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 25/85 (29%), Gaps = 3/85 (3%)
Query: 90 IVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEH 146
IV+ + L + + F V + + +P A+ G Y L FD
Sbjct: 52 IVLNLAPHAIHQLHMSNEAVTFSARFGGVAKDIYVPIQAVLGIYARENGQGLFFDPSEYD 111
Query: 147 IEEKLEGGNTGKVLTSPDNFDKNQT 171
E T + K +
Sbjct: 112 AVETNNIAETAPSTEVAEPSKKKPS 136
>gi|312958963|ref|ZP_07773482.1| stringent starvation protein B [Pseudomonas fluorescens WH6]
gi|311286733|gb|EFQ65295.1| stringent starvation protein B [Pseudomonas fluorescens WH6]
Length = 139
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 27/79 (34%)
Query: 97 WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNT 156
L + + F VP L +P AI G Y + FD+ +++
Sbjct: 56 RHLHMDNEAVSFEGRFGGVPHTLYVPIGAILGIYARENGQGMVFDLESPFEDDETIESED 115
Query: 157 GKVLTSPDNFDKNQTNSVS 175
G L PD+ + S
Sbjct: 116 GDDLPPPDSEPPRPSGRPS 134
>gi|168486690|ref|ZP_02711198.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae CDC1087-00]
gi|183570349|gb|EDT90877.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae CDC1087-00]
Length = 1280
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 95 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 154
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 155 KKIVSIDAGRK 165
>gi|182683029|ref|YP_001834776.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae CGSP14]
gi|182628363|gb|ACB89311.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae CGSP14]
Length = 1341
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 156 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 215
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 216 KKIVSIDAGRK 226
>gi|253991124|ref|YP_003042480.1| ClpXP protease specificity-enhancing factor [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253782574|emb|CAQ85738.1| stringent starvation protein b [Photorhabdus asymbiotica]
Length = 171
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 15/109 (13%), Positives = 31/109 (28%), Gaps = 10/109 (9%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ + F VP ++ +P A+ Y + F+ + +E L +
Sbjct: 62 NLELANEEVRFNARFGGVPRQVYVPMAAVIAIYGRENGAGMMFEPETAYNDEYLFESASD 121
Query: 158 KVLTSPDNFDKN----------QTNSVSQDSSKKKSTKKQNKNKMASVI 196
K + S S + K V+
Sbjct: 122 KDEMGTSASATDNLVLVTDILGDAEDNSGISPDDEPPKPTRGRPALRVV 170
>gi|296159519|ref|ZP_06842343.1| Stringent starvation protein B [Burkholderia sp. Ch1-1]
gi|295890227|gb|EFG70021.1| Stringent starvation protein B [Burkholderia sp. Ch1-1]
Length = 169
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 40/131 (30%), Gaps = 5/131 (3%)
Query: 69 TNARGVRISQ--NLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPF 123
T VR+ + + + IV+ F L++ + E FS ++ +P
Sbjct: 24 TPHIAVRVDNQTRVPRQFVRDNEIVLNISFEATSQLQMGNEWIEFSARFSGKSHKIEVPI 83
Query: 124 NAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKS 183
I Y + F V E G + + + + D+ K+
Sbjct: 84 ANILAIYARENGQGMAFPVESAGGEALDSGADAEVAEQAESPVPRAVETAPVTDAVAAKT 143
Query: 184 TKKQNKNKMAS 194
+ ++
Sbjct: 144 DSATDGSQPDD 154
>gi|332076516|gb|EGI86978.1| LPXTG-motif cell wall anchor domain protein [Streptococcus
pneumoniae GA17545]
Length = 1312
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|307126286|ref|YP_003878317.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae 670-6B]
gi|306483348|gb|ADM90217.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae 670-6B]
gi|332077369|gb|EGI87830.1| LPXTG-motif cell wall anchor domain protein [Streptococcus
pneumoniae GA41301]
Length = 1312
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|307066736|ref|YP_003875702.1| hypothetical protein SPAP_0106 [Streptococcus pneumoniae AP200]
gi|306408273|gb|ADM83700.1| hypothetical protein SPAP_0106 [Streptococcus pneumoniae AP200]
Length = 1319
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 134 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 193
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 194 KKIVSIDAGRK 204
>gi|225855846|ref|YP_002737357.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae P1031]
gi|225725561|gb|ACO21413.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae P1031]
Length = 1311
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 126 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 185
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 186 KKIVSIDAGRK 196
>gi|148996463|ref|ZP_01824181.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP11-BS70]
gi|168576908|ref|ZP_02722750.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae MLV-016]
gi|194398622|ref|YP_002036777.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae G54]
gi|147757038|gb|EDK64077.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP11-BS70]
gi|183577430|gb|EDT97958.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae MLV-016]
gi|194358289|gb|ACF56737.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae G54]
gi|332201983|gb|EGJ16052.1| LPXTG-motif cell wall anchor domain protein [Streptococcus
pneumoniae GA41317]
Length = 1312
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|784897|gb|AAC41450.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae]
Length = 1311
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 126 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 185
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 186 KKIVSIDAGRK 196
>gi|148993897|ref|ZP_01823280.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP9-BS68]
gi|147927604|gb|EDK78630.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP9-BS68]
Length = 1312
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|303255508|ref|ZP_07341567.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae BS455]
gi|303259103|ref|ZP_07345081.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP-BS293]
gi|303260860|ref|ZP_07346809.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP14-BS292]
gi|303263187|ref|ZP_07349110.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae BS397]
gi|303266697|ref|ZP_07352580.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae BS457]
gi|303268967|ref|ZP_07354751.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae BS458]
gi|301801024|emb|CBW33690.1| beta-N-acetylhexosaminidase precursor (ec 3.2.1.52)
(sortase-sorted) [Streptococcus pneumoniae INV200]
gi|302597528|gb|EFL64615.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae BS455]
gi|302637697|gb|EFL68183.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP14-BS292]
gi|302639521|gb|EFL69978.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP-BS293]
gi|302641505|gb|EFL71868.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae BS458]
gi|302643775|gb|EFL74039.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae BS457]
gi|302646960|gb|EFL77184.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae BS397]
Length = 1312
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|332075723|gb|EGI86190.1| LPXTG-motif cell wall anchor domain protein [Streptococcus
pneumoniae GA17570]
Length = 1312
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|218708472|ref|YP_002416093.1| ClpXP protease specificity-enhancing factor [Vibrio splendidus
LGP32]
gi|218321491|emb|CAV17443.1| SspB [Vibrio splendidus LGP32]
Length = 164
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 1/95 (1%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L++ + FS P +++P A++ Y F+ E E E G
Sbjct: 63 LELGNEAVTFSARFSGRPHSVIVPLYAVQAIYARENGAGTMFE-PEEAYMEAFEEGIEES 121
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
P+ + D+ + S + ++
Sbjct: 122 PFEEPEKGPSLSVATADVDAEESDSEPEPSRPAKG 156
>gi|168489468|ref|ZP_02713667.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP195]
gi|183572067|gb|EDT92595.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP195]
Length = 1312
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|168483637|ref|ZP_02708589.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae CDC1873-00]
gi|172042977|gb|EDT51023.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae CDC1873-00]
gi|332205091|gb|EGJ19154.1| LPXTG-motif cell wall anchor domain protein [Streptococcus
pneumoniae GA47368]
Length = 1312
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|149006777|ref|ZP_01830463.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP18-BS74]
gi|147761692|gb|EDK68656.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP18-BS74]
Length = 743
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 118 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 177
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 178 KKIVSIDAGRK 188
>gi|119477348|ref|ZP_01617539.1| stringent starvation protein B [marine gamma proteobacterium
HTCC2143]
gi|119449274|gb|EAW30513.1| stringent starvation protein B [marine gamma proteobacterium
HTCC2143]
Length = 141
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 28/79 (35%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
DL V D + F VP + +P +A+ G Y + FD+ ++ G+
Sbjct: 57 DLLVADEDVQFNGRFGGVPMDIYVPMSAVMGIYARENGQGMIFDLDEGDVKPPTPEGSDP 116
Query: 158 KVLTSPDNFDKNQTNSVSQ 176
QT + S
Sbjct: 117 TTNGPKLVKKSPQTKTKSP 135
>gi|290476816|ref|YP_003469727.1| stringent starvation protein B [Xenorhabdus bovienii SS-2004]
gi|289176160|emb|CBJ82965.1| stringent starvation protein B [Xenorhabdus bovienii SS-2004]
Length = 160
Score = 36.1 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 12/99 (12%), Positives = 31/99 (31%), Gaps = 1/99 (1%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ ++ F V ++ +P A+ Y + F+ + +
Sbjct: 62 NLELTNDEVRFNARFGGVARQVSVPMAAVIAVYGRENGAGMMFEPESAYQAGSTPEDSDV 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
V + + + DSS + + V+
Sbjct: 122 PVADNLVLIS-DAKIARDNDSSDDEPPQPPKGRPTLRVV 159
>gi|27364054|ref|NP_759582.1| ClpXP protease specificity-enhancing factor [Vibrio vulnificus
CMCP6]
gi|37678784|ref|NP_933393.1| ClpXP protease specificity-enhancing factor [Vibrio vulnificus
YJ016]
gi|27360172|gb|AAO09109.1| Stringent starvation protein B [Vibrio vulnificus CMCP6]
gi|37197525|dbj|BAC93364.1| stringent starvation protein B [Vibrio vulnificus YJ016]
Length = 158
Score = 36.1 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 11/99 (11%), Positives = 27/99 (27%), Gaps = 3/99 (3%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ ++ F P +++P A+ Y F+ +
Sbjct: 62 NLELGNDTISFNARFGGRPHSVIVPLYAVLAIYARENGAGTMFEPEEAYTSIPGAEQEED 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
+ + Q S D + + V+
Sbjct: 122 DGIWLEEEHSAPQP---SIDFDDEPEPPRPKGRPSLRVV 157
>gi|149010922|ref|ZP_01832227.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP19-BS75]
gi|147764558|gb|EDK71488.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP19-BS75]
Length = 1312
Score = 36.1 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|327390470|gb|EGE88810.1| LPXTG-motif cell wall anchor domain protein [Streptococcus
pneumoniae GA04375]
Length = 1312
Score = 36.1 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|320157437|ref|YP_004189816.1| stringent starvation protein B [Vibrio vulnificus MO6-24/O]
gi|319932749|gb|ADV87613.1| stringent starvation protein B [Vibrio vulnificus MO6-24/O]
Length = 153
Score = 36.1 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 11/99 (11%), Positives = 27/99 (27%), Gaps = 3/99 (3%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ ++ F P +++P A+ Y F+ +
Sbjct: 57 NLELGNDTISFNARFGGRPHSVIVPLYAVLAIYARENGAGTMFEPEEAYTSIPGAEQEED 116
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
+ + Q S D + + V+
Sbjct: 117 DGIWLEEEHSAPQP---SIDFDDEPEPPRPKGRPSLRVV 152
>gi|86148526|ref|ZP_01066813.1| stringent starvation protein B [Vibrio sp. MED222]
gi|85833672|gb|EAQ51843.1| stringent starvation protein B [Vibrio sp. MED222]
Length = 159
Score = 36.1 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 1/95 (1%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L++ + FS P +++P A++ Y F+ E E E G
Sbjct: 58 LELGNEAVTFSARFSGRPHSVIVPLYAVQAIYARENGAGTMFE-PEEAYMEAFEEGIEES 116
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
P+ + D+ + S + ++
Sbjct: 117 PFEEPEKGPSLSVATADVDAEESDSEPEPSRPAKG 151
>gi|238793690|ref|ZP_04637312.1| Stringent starvation protein B [Yersinia intermedia ATCC 29909]
gi|238726931|gb|EEQ18463.1| Stringent starvation protein B [Yersinia intermedia ATCC 29909]
Length = 171
Score = 36.1 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 31/101 (30%), Gaps = 5/101 (4%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ ++ F VP ++ +P A+ Y F+ + +
Sbjct: 62 NLELGNDEVSFNARFGGVPRQVTVPMAAVMAIYARENGSGTMFEPEEAYDSDVDGNFEAF 121
Query: 158 KVLTSPDNFDKN-----QTNSVSQDSSKKKSTKKQNKNKMA 193
+ S +N VSQD S + +
Sbjct: 122 EEEGSETASAENLTLVTGDTLVSQDDSHSPDDEPPKPPRSG 162
>gi|113968950|ref|YP_732743.1| ClpXP protease specificity-enhancing factor [Shewanella sp. MR-4]
gi|114048912|ref|YP_739462.1| ClpXP protease specificity-enhancing factor [Shewanella sp. MR-7]
gi|113883634|gb|ABI37686.1| Stringent starvation protein B [Shewanella sp. MR-4]
gi|113890354|gb|ABI44405.1| Stringent starvation protein B [Shewanella sp. MR-7]
Length = 145
Score = 36.1 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 29/77 (37%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ + E F VP+++++P +I Y FD+ ++ E+
Sbjct: 60 NLQIGNEFVEFNARFGGVPQQVLLPMASIVAIYARENGAGTVFDIEDAYLVEEEAESTLS 119
Query: 158 KVLTSPDNFDKNQTNSV 174
+ T+ +
Sbjct: 120 VIETNEKPTEPTDEPPK 136
>gi|311103388|ref|YP_003976241.1| stringent starvation protein B [Achromobacter xylosoxidans A8]
gi|310758077|gb|ADP13526.1| stringent starvation protein B [Achromobacter xylosoxidans A8]
Length = 149
Score = 36.1 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 27/85 (31%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L + + E FS V E + +P A+ Y + F+V E G T
Sbjct: 59 LTLGNEFIEFQARFSGVTENVYVPVGAVSAIYARETGAGMGFEVQPYEPPEAGAQGATVP 118
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKS 183
+ D + D K+
Sbjct: 119 AAPEGSDADAAPGDDGGDDDEPKRP 143
>gi|213966582|ref|ZP_03394733.1| stringent starvation protein B [Pseudomonas syringae pv. tomato T1]
gi|301384703|ref|ZP_07233121.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. tomato Max13]
gi|302059810|ref|ZP_07251351.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. tomato K40]
gi|302131756|ref|ZP_07257746.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. tomato NCPPB 1108]
gi|213928432|gb|EEB61976.1| stringent starvation protein B [Pseudomonas syringae pv. tomato T1]
Length = 137
Score = 36.1 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Query: 97 WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE-HIEEKLEGGN 155
L + ++ F VP L +P AI G Y + FD+ E++E +
Sbjct: 56 RHLHMDNDAVSFEGRFGGVPHTLYVPVAAILGIYARENGQGMVFDLEPSLEAGEEIETED 115
Query: 156 T 156
Sbjct: 116 D 116
>gi|167620635|ref|ZP_02389266.1| ClpXP protease specificity-enhancing factor [Burkholderia
thailandensis Bt4]
Length = 170
Score = 36.1 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 3/121 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + + IV+ F L++ + E FS ++ +P + Y
Sbjct: 31 VDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKIEVPVANVLAIY 90
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
+ F V + EGG+ + + +++ +
Sbjct: 91 ARENGQGMAFQVDVVAETGDAEGGDGLAAAEEGGDAGTHAAPDAVIEAASESGEPADELP 150
Query: 191 K 191
K
Sbjct: 151 K 151
>gi|167582520|ref|ZP_02375394.1| ClpXP protease specificity-enhancing factor [Burkholderia
thailandensis TXDOH]
Length = 170
Score = 36.1 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 38/122 (31%), Gaps = 3/122 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + + IV+ F L++ + E FS ++ +P + Y
Sbjct: 31 VDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKIEVPVANVLAIY 90
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
+ F V + EGG+ + + V +++ +
Sbjct: 91 ARENGQGMAFQVDVVAETGDAEGGDGLAAAQEGGDAGTHAAPDVVIEAASESGEPADELP 150
Query: 191 KM 192
K
Sbjct: 151 KA 152
>gi|90022801|ref|YP_528628.1| ClpXP protease specificity-enhancing factor [Saccharophagus
degradans 2-40]
gi|89952401|gb|ABD82416.1| Stringent starvation protein B [Saccharophagus degradans 2-40]
Length = 133
Score = 36.1 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 28/96 (29%), Gaps = 6/96 (6%)
Query: 70 NARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAI 126
+A V + Q IV+ L + + F VP L +P A+
Sbjct: 32 HAPNVEVPQEYVNK---DGQIVLNIAPRAVEGLDLGNKAISFQARFGGVPTHLYVPCQAV 88
Query: 127 KGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTS 162
G Y + FD+ + ++
Sbjct: 89 LGIYARENGQGMMFDLESNPEPDPDPAPVEPDPKSA 124
>gi|117919058|ref|YP_868250.1| ClpXP protease specificity-enhancing factor [Shewanella sp. ANA-3]
gi|117611390|gb|ABK46844.1| Stringent starvation protein B [Shewanella sp. ANA-3]
Length = 145
Score = 36.1 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 29/77 (37%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ + E F VP+++++P +I Y FD+ ++ E+
Sbjct: 60 NLQIGNEFVEFNARFGGVPQQVLLPMASIVAIYARENGAGTVFDIEDAYLVEEEAESTLS 119
Query: 158 KVLTSPDNFDKNQTNSV 174
+ T+ +
Sbjct: 120 VIETNEKPTEPTDEPPK 136
>gi|238764259|ref|ZP_04625211.1| Stringent starvation protein B [Yersinia kristensenii ATCC 33638]
gi|238697540|gb|EEP90305.1| Stringent starvation protein B [Yersinia kristensenii ATCC 33638]
Length = 171
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 11/102 (10%), Positives = 29/102 (28%), Gaps = 7/102 (6%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEK------- 150
+L++ + F +P + +P A+ Y F+ + +
Sbjct: 62 NLELGNEEVSFNARFGGIPREVTVPMGAVMAIYARENGSGTMFEPEEAYDSDADGNFVGI 121
Query: 151 LEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM 192
E N + + +D+S + ++
Sbjct: 122 EEEDNATAPTENLMLVTDDAHVPHGEDNSPDDEPPQPPRSGG 163
>gi|298501848|ref|YP_003723788.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae TCH8431/19A]
gi|298237443|gb|ADI68574.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae TCH8431/19A]
Length = 1341
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 156 EEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATVNEKLAK 215
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 216 KKIVSIDAGRK 226
>gi|298230716|ref|ZP_06964397.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255269|ref|ZP_06978855.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae str. Canada
MDR_19A]
Length = 1312
Score = 35.7 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 EEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|225860098|ref|YP_002741607.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae Taiwan19F-14]
gi|225728171|gb|ACO24022.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae Taiwan19F-14]
Length = 1312
Score = 35.7 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 EEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|332286356|ref|YP_004418267.1| hypothetical protein PT7_3103 [Pusillimonas sp. T7-7]
gi|330430309|gb|AEC21643.1| hypothetical protein PT7_3103 [Pusillimonas sp. T7-7]
Length = 160
Score = 35.7 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 29/96 (30%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
L + + + E FS V E + +P A+ Y + FDV E
Sbjct: 58 GLTLGNEYIEFQTRFSGVTEHIFVPVGAVSAIYARETGAGMGFDVVESQPYPGGESSPAS 117
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ P + + N S+ + K
Sbjct: 118 GADSGPGSSEINLEAVSDNGSAVAAEGSTSSAPKKP 153
>gi|225853692|ref|YP_002735204.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae JJA]
gi|225722880|gb|ACO18733.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae JJA]
Length = 1312
Score = 35.7 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 EEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|225857926|ref|YP_002739436.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae 70585]
gi|225720409|gb|ACO16263.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae 70585]
Length = 1320
Score = 35.7 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 135 EEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATVNEKLAK 194
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 195 KKIVSIDAGRK 205
>gi|168493760|ref|ZP_02717903.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae CDC3059-06]
gi|221231005|ref|YP_002510157.1| beta-N-acetylhexosaminidase precursor [Streptococcus pneumoniae
ATCC 700669]
gi|183576016|gb|EDT96544.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae CDC3059-06]
gi|220673465|emb|CAR67933.1| beta-N-acetylhexosaminidase precursor (ec 3.2.1.52)
(sortase-sorted) [Streptococcus pneumoniae ATCC 700669]
Length = 1312
Score = 35.7 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 EEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|15902101|ref|NP_357651.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae R6]
gi|15457590|gb|AAK98861.1| Beta-N-acetyl-hexosaminidase precursor [Streptococcus pneumoniae
R6]
Length = 1312
Score = 35.7 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 EEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|50119269|ref|YP_048436.1| ClpXP protease specificity-enhancing factor [Pectobacterium
atrosepticum SCRI1043]
gi|49609795|emb|CAG73229.1| stringent starvation protein B [Pectobacterium atrosepticum
SCRI1043]
Length = 167
Score = 35.7 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 28/98 (28%), Gaps = 2/98 (2%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF--DVHIEHIEEKLEGGN 155
L++ D+ F VP ++ +P A+ Y F + E E
Sbjct: 62 GLELADDSVRFNARFGGVPRQVHVPMAAVMAIYARENGAGTMFESEPAYESAGEYEGFQE 121
Query: 156 TGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ + + +S + D + K
Sbjct: 122 GAPSSGTVMSIVDSSPDSEAPDDGSGSDDEPPPPPKGG 159
>gi|169833911|ref|YP_001693586.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae Hungary19A-6]
gi|168996413|gb|ACA37025.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae Hungary19A-6]
Length = 1312
Score = 35.7 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 EEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|116517042|ref|YP_815512.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae D39]
gi|116077618|gb|ABJ55338.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae D39]
Length = 1312
Score = 35.7 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 EEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|254515256|ref|ZP_05127317.1| stringent starvation protein B [gamma proteobacterium NOR5-3]
gi|219677499|gb|EED33864.1| stringent starvation protein B [gamma proteobacterium NOR5-3]
Length = 131
Score = 35.7 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 7/91 (7%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
GV + Q+ Y + IV+ + +L++ D+ F P + +P +AI G
Sbjct: 32 PGVDVPQD----YVKDGQIVLNLSPSAVIELQLADDCVSFNGRFGGKPTDVFMPMSAILG 87
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKV 159
Y + F+ + EGG+
Sbjct: 88 IYARENGQGMAFEPEEDDGGPAPEGGSEPTP 118
>gi|148987787|ref|ZP_01819250.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP6-BS73]
gi|147926251|gb|EDK77324.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP6-BS73]
Length = 319
Score = 35.7 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEDDKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|76809975|ref|YP_335035.1| ClpXP protease specificity-enhancing factor [Burkholderia
pseudomallei 1710b]
gi|254198623|ref|ZP_04905044.1| stringent starvation protein B [Burkholderia pseudomallei S13]
gi|76579428|gb|ABA48903.1| stringent starvation protein B [Burkholderia pseudomallei 1710b]
gi|169655363|gb|EDS88056.1| stringent starvation protein B [Burkholderia pseudomallei S13]
Length = 175
Score = 35.7 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 38/119 (31%), Gaps = 3/119 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + + IV+ F L++ + E FS +L +P + Y
Sbjct: 33 VDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKLEVPVANVLAIY 92
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK 189
+ F V + + +G + V D+ ++ + + +
Sbjct: 93 ARENGQGMAFQVDVAAETGEADGSDALAVAEEGDDAGARHASADGAAEAAPEPGDAAEE 151
>gi|218550504|ref|YP_002384295.1| ClpXP protease specificity-enhancing factor [Escherichia fergusonii
ATCC 35469]
gi|218358045|emb|CAQ90691.1| ClpXP protease specificity-enhancing factor [Escherichia fergusonii
ATCC 35469]
gi|324115174|gb|EGC09138.1| stringent starvation protein B [Escherichia fergusonii B253]
gi|325498802|gb|EGC96661.1| ClpXP protease specificity-enhancing factor [Escherichia fergusonii
ECD227]
Length = 167
Score = 35.7 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 30/97 (30%), Gaps = 7/97 (7%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
GV++ Y IV+ +L++ ++ F VP ++ +P A+
Sbjct: 37 PGVKVP----MEYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGVPRQVYVPLAAVLA 92
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDN 165
Y F+ + EE +
Sbjct: 93 IYARENGAGTMFEPEAAYDEEIASQNDDETTSADESE 129
>gi|53720726|ref|YP_109712.1| ClpXP protease specificity-enhancing factor [Burkholderia
pseudomallei K96243]
gi|52211140|emb|CAH37129.1| putative stringent starvation protein B [Burkholderia pseudomallei
K96243]
Length = 185
Score = 35.7 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 39/119 (32%), Gaps = 3/119 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + + IV+ F L++ + E FS +L +P + Y
Sbjct: 43 VDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKLEVPVANVLAIY 102
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK 189
+ F V + + +G + V+ D+ ++ + + +
Sbjct: 103 ARENGQGMAFQVDVAAETGEADGSDALAVVEEGDDAGARHASADGAAEAAPEPGDAAEE 161
>gi|167817649|ref|ZP_02449329.1| ClpXP protease specificity-enhancing factor [Burkholderia
pseudomallei 91]
Length = 173
Score = 35.7 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 39/119 (32%), Gaps = 3/119 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + + IV+ F L++ + E FS +L +P + Y
Sbjct: 31 VDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKLEVPVANVLAIY 90
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK 189
+ F V + + +G + V+ D+ ++ + + +
Sbjct: 91 ARENGQGMAFQVDVAAETGEADGSDALAVVEEGDDAGARHASADGAAEAAPEPGDAAEE 149
>gi|126439994|ref|YP_001060650.1| ClpXP protease specificity-enhancing factor [Burkholderia
pseudomallei 668]
gi|126453519|ref|YP_001067933.1| ClpXP protease specificity-enhancing factor [Burkholderia
pseudomallei 1106a]
gi|134283200|ref|ZP_01769901.1| stringent starvation protein B [Burkholderia pseudomallei 305]
gi|167721466|ref|ZP_02404702.1| ClpXP protease specificity-enhancing factor [Burkholderia
pseudomallei DM98]
gi|167740437|ref|ZP_02413211.1| ClpXP protease specificity-enhancing factor [Burkholderia
pseudomallei 14]
gi|167904514|ref|ZP_02491719.1| ClpXP protease specificity-enhancing factor [Burkholderia
pseudomallei NCTC 13177]
gi|167920736|ref|ZP_02507827.1| ClpXP protease specificity-enhancing factor [Burkholderia
pseudomallei BCC215]
gi|217424723|ref|ZP_03456220.1| stringent starvation protein B [Burkholderia pseudomallei 576]
gi|242316209|ref|ZP_04815225.1| stringent starvation protein B [Burkholderia pseudomallei 1106b]
gi|254190400|ref|ZP_04896908.1| stringent starvation protein B [Burkholderia pseudomallei Pasteur
52237]
gi|254258325|ref|ZP_04949379.1| stringent starvation protein B [Burkholderia pseudomallei 1710a]
gi|126219487|gb|ABN82993.1| stringent starvation protein B [Burkholderia pseudomallei 668]
gi|126227161|gb|ABN90701.1| stringent starvation protein B [Burkholderia pseudomallei 1106a]
gi|134245395|gb|EBA45488.1| stringent starvation protein B [Burkholderia pseudomallei 305]
gi|157938076|gb|EDO93746.1| stringent starvation protein B [Burkholderia pseudomallei Pasteur
52237]
gi|217392179|gb|EEC32204.1| stringent starvation protein B [Burkholderia pseudomallei 576]
gi|242139448|gb|EES25850.1| stringent starvation protein B [Burkholderia pseudomallei 1106b]
gi|254217014|gb|EET06398.1| stringent starvation protein B [Burkholderia pseudomallei 1710a]
Length = 173
Score = 35.7 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 38/119 (31%), Gaps = 3/119 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + + IV+ F L++ + E FS +L +P + Y
Sbjct: 31 VDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKLEVPVANVLAIY 90
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK 189
+ F V + + +G + V D+ ++ + + +
Sbjct: 91 ARENGQGMAFQVDVAAETGEADGSDALAVAEEGDDAGARHASADGAAEAAPEPGDAAEE 149
>gi|91228499|ref|ZP_01262421.1| stringent starvation protein B [Vibrio alginolyticus 12G01]
gi|91187933|gb|EAS74243.1| stringent starvation protein B [Vibrio alginolyticus 12G01]
Length = 161
Score = 35.7 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 33/99 (33%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ ++ FS P +++P A++ Y F+ + + E
Sbjct: 62 NLELGNDAITFHARFSGRPHSVIVPVYAVQAIYARENGAGTMFEPEEAYTHIEEEAMTEE 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
+ S + VS +++ + VI
Sbjct: 122 ESSPSFTTVSDEPSELVSDSDAEEDDAPRPKGKPSLRVI 160
>gi|53803980|ref|YP_114391.1| ClpXP protease specificity-enhancing factor [Methylococcus
capsulatus str. Bath]
gi|53757741|gb|AAU92032.1| stringent starvation protein B [Methylococcus capsulatus str. Bath]
Length = 130
Score = 35.7 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 36/107 (33%), Gaps = 20/107 (18%)
Query: 43 LVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVI-------QNQ 95
L++ V + P Y+ V + + Y ++ IV+ Q+
Sbjct: 8 LIRAVYDWLVDNDFTP-----YLLVDAEVPSVDVPR----QYVQEGRIVLNLRPQAVQH- 57
Query: 96 FWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV 142
D+ + F F P R+ IP +A+ Y + FD
Sbjct: 58 -LDMNNREVTFSA--RFGGTPTRVYIPISAVMALYARENGQGMVFDQ 101
>gi|156935744|ref|YP_001439660.1| ClpXP protease specificity-enhancing factor [Cronobacter sakazakii
ATCC BAA-894]
gi|156533998|gb|ABU78824.1| hypothetical protein ESA_03614 [Cronobacter sakazakii ATCC BAA-894]
Length = 163
Score = 35.7 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 10/96 (10%), Positives = 25/96 (26%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ ++ F VP ++ +P A+ Y F+ + EE +
Sbjct: 62 NLELANDEVRFNARFGGVPRQVTVPLAAVLAIYARENGAGTMFEPEAAYDEEMASLNDEN 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ + +
Sbjct: 122 SAEEPETVMSVIDGDKPDDADDNDPGDEPPPRGGRP 157
>gi|269967399|ref|ZP_06181459.1| stringent starvation protein B [Vibrio alginolyticus 40B]
gi|269827987|gb|EEZ82261.1| stringent starvation protein B [Vibrio alginolyticus 40B]
Length = 161
Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 33/99 (33%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ ++ FS P +++P A++ Y F+ + + E
Sbjct: 62 NLELGNDAITFHARFSGRPHSVIVPVYAVQAIYARENGAGTMFEPEEAYTHIEEEAMTEE 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
+ S + VS +++ + VI
Sbjct: 122 ESSPSFTTVSDEPSELVSDSDAEEDDAPRPKGKPSLRVI 160
>gi|71737095|ref|YP_276245.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|257483463|ref|ZP_05637504.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. tabaci ATCC 11528]
gi|71557648|gb|AAZ36859.1| stringent starvation protein B [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320322465|gb|EFW78558.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. glycinea str. B076]
gi|320330066|gb|EFW86053.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. glycinea str. race 4]
gi|330875032|gb|EGH09181.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. glycinea str. race 4]
gi|330987119|gb|EGH85222.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. lachrymans str. M301315]
gi|331011563|gb|EGH91619.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. tabaci ATCC 11528]
Length = 136
Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 21/75 (28%)
Query: 97 WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNT 156
L + + F VP L +P AI G Y + FD+ E +
Sbjct: 56 RHLHMDNEAVSFEGRFGGVPHTLYVPVAAILGIYARENGQGMVFDLEPSMDEGEEIEIED 115
Query: 157 GKVLTSPDNFDKNQT 171
S +
Sbjct: 116 DTPPDSEPPRPSGRP 130
>gi|90416997|ref|ZP_01224926.1| stringent starvation protein B [marine gamma proteobacterium
HTCC2207]
gi|90331344|gb|EAS46588.1| stringent starvation protein B [marine gamma proteobacterium
HTCC2207]
Length = 147
Score = 35.3 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 20/130 (15%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTIVIQ-------NQFWDLKVLDNHFEVGLSFSNVP 116
YI + GV + Q +Y IV+ N DL++L F F +P
Sbjct: 26 YIVVDAHHPGVEVPQ----SYVTDGQIVLNVAPRAVSNFILDLEIL--AFST--RFGGMP 77
Query: 117 ERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQ 176
+ +P A+ G Y + F+ E + T + ++
Sbjct: 78 IDIQVPVTAVVGIYSQENGQGMVFEH-----EASDDLPPTPPSGPKAVKKSSTKPSASLS 132
Query: 177 DSSKKKSTKK 186
D + KK
Sbjct: 133 DKAPKKIKPS 142
>gi|146294359|ref|YP_001184783.1| ClpXP protease specificity-enhancing factor [Shewanella
putrefaciens CN-32]
gi|145566049|gb|ABP76984.1| Stringent starvation protein B [Shewanella putrefaciens CN-32]
Length = 145
Score = 35.3 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 26/77 (33%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ + E F VP+++++P +I Y FDV ++
Sbjct: 60 NLQISNEFVEFNARFGGVPQQVLLPMASIIAIYARENGAGTVFDVEDAYLMGDEAESVLS 119
Query: 158 KVLTSPDNFDKNQTNSV 174
V + D
Sbjct: 120 VVDVTDKPKDPTDQPPK 136
>gi|84394624|ref|ZP_00993321.1| stringent starvation protein B [Vibrio splendidus 12B01]
gi|84374754|gb|EAP91704.1| stringent starvation protein B [Vibrio splendidus 12B01]
Length = 159
Score = 35.3 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 26/94 (27%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L++ + FS P +++P A++ Y F+ ++E EG
Sbjct: 58 LELGNEAVTFSARFSGRPHSVIVPLYAVQAIYARENGAGTMFEPEEAYMESFEEGIEESP 117
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM 192
+ + + K
Sbjct: 118 FEEQEKGPSLSVATADVDAEEPDSDPEPPRPAKG 151
>gi|53724246|ref|YP_104215.1| ClpXP protease specificity-enhancing factor [Burkholderia mallei
ATCC 23344]
gi|254300672|ref|ZP_04968117.1| stringent starvation protein B [Burkholderia pseudomallei 406e]
gi|52427669|gb|AAU48262.1| stringent starvation protein B [Burkholderia mallei ATCC 23344]
gi|157810644|gb|EDO87814.1| stringent starvation protein B [Burkholderia pseudomallei 406e]
Length = 175
Score = 35.3 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 38/119 (31%), Gaps = 3/119 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + + IV+ F L++ + E FS +L +P + Y
Sbjct: 33 VDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKLEVPVANVLAIY 92
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK 189
+ F V + + +G + V D+ ++ + + +
Sbjct: 93 ARENGQGMAFQVDVAAEMGEADGSDALAVAEEGDDAGARHASADGAAEAAPEPGDAAEE 151
>gi|254180436|ref|ZP_04887034.1| stringent starvation protein B [Burkholderia pseudomallei 1655]
gi|184210975|gb|EDU08018.1| stringent starvation protein B [Burkholderia pseudomallei 1655]
Length = 175
Score = 35.3 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 38/119 (31%), Gaps = 3/119 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + + IV+ F L++ + E FS +L +P + Y
Sbjct: 31 VDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKLEVPVANVLAIY 90
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK 189
+ F V + + +G + V D+ ++ + + +
Sbjct: 91 ARENGQGMAFQVDVAAEMGEADGSDALAVAEEGDDAGARHASADGAAEAAPEPGDAAEE 149
>gi|121599481|ref|YP_994543.1| ClpXP protease specificity-enhancing factor [Burkholderia mallei
SAVP1]
gi|124384806|ref|YP_001027788.1| ClpXP protease specificity-enhancing factor [Burkholderia mallei
NCTC 10229]
gi|126451049|ref|YP_001082265.1| ClpXP protease specificity-enhancing factor [Burkholderia mallei
NCTC 10247]
gi|167001614|ref|ZP_02267408.1| stringent starvation protein B [Burkholderia mallei PRL-20]
gi|167829990|ref|ZP_02461461.1| ClpXP protease specificity-enhancing factor [Burkholderia
pseudomallei 9]
gi|167847553|ref|ZP_02473061.1| ClpXP protease specificity-enhancing factor [Burkholderia
pseudomallei B7210]
gi|167912776|ref|ZP_02499867.1| ClpXP protease specificity-enhancing factor [Burkholderia
pseudomallei 112]
gi|226198268|ref|ZP_03793839.1| stringent starvation protein B [Burkholderia pseudomallei Pakistan
9]
gi|238562491|ref|ZP_00440350.2| stringent starvation protein B [Burkholderia mallei GB8 horse 4]
gi|254175294|ref|ZP_04881955.1| stringent starvation protein B [Burkholderia mallei ATCC 10399]
gi|254201289|ref|ZP_04907653.1| stringent starvation protein B [Burkholderia mallei FMH]
gi|254206631|ref|ZP_04912982.1| stringent starvation protein B [Burkholderia mallei JHU]
gi|254357256|ref|ZP_04973530.1| stringent starvation protein B [Burkholderia mallei 2002721280]
gi|121228291|gb|ABM50809.1| stringent starvation protein B [Burkholderia mallei SAVP1]
gi|124292826|gb|ABN02095.1| stringent starvation protein B [Burkholderia mallei NCTC 10229]
gi|126243919|gb|ABO07012.1| stringent starvation protein B [Burkholderia mallei NCTC 10247]
gi|147747183|gb|EDK54259.1| stringent starvation protein B [Burkholderia mallei FMH]
gi|147752173|gb|EDK59239.1| stringent starvation protein B [Burkholderia mallei JHU]
gi|148026320|gb|EDK84405.1| stringent starvation protein B [Burkholderia mallei 2002721280]
gi|160696339|gb|EDP86309.1| stringent starvation protein B [Burkholderia mallei ATCC 10399]
gi|225929788|gb|EEH25804.1| stringent starvation protein B [Burkholderia pseudomallei Pakistan
9]
gi|238522527|gb|EEP85971.1| stringent starvation protein B [Burkholderia mallei GB8 horse 4]
gi|243062624|gb|EES44810.1| stringent starvation protein B [Burkholderia mallei PRL-20]
Length = 173
Score = 35.3 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 38/119 (31%), Gaps = 3/119 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + + IV+ F L++ + E FS +L +P + Y
Sbjct: 31 VDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKLEVPVANVLAIY 90
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK 189
+ F V + + +G + V D+ ++ + + +
Sbjct: 91 ARENGQGMAFQVDVAAEMGEADGSDALAVAEEGDDAGARHASADGAAEAAPEPGDAAEE 149
>gi|94312157|ref|YP_585367.1| ClpXP protease specificity-enhancing factor [Cupriavidus
metallidurans CH34]
gi|93356009|gb|ABF10098.1| ClpXP protease specificity-enhancing factor [Cupriavidus
metallidurans CH34]
Length = 165
Score = 35.3 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 13/104 (12%), Positives = 28/104 (26%), Gaps = 3/104 (2%)
Query: 90 IVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEH 146
IV+ F L + + F V ++ +P + + Y + F V
Sbjct: 47 IVLNVSFDATSGLDMGNEWITFSARFGGVSRKIEVPVDNVLAIYARENGQGMAFPVERSI 106
Query: 147 IEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
E + + D + V+ + +
Sbjct: 107 PETQAATERENNPPPKLASVDSDTPAPVTAEEGVSPDDDPTPPS 150
>gi|32564850|ref|NP_871879.1| Temporarily Assigned Gene name family member (tag-332)
[Caenorhabditis elegans]
gi|27670586|gb|AAO21405.1| Temporarily assigned gene name protein 332, isoform b, partially
confirmed by transcript evidence [Caenorhabditis
elegans]
Length = 765
Score = 35.3 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 27/61 (44%)
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
DP +F L F + +L ++ +P + T V++ S+ K+ + + ++
Sbjct: 346 DPVHSFGLRFQEVFDRRWAELGDSSSRASSVAPQSAPIAPTPKVAKSSAPKEPKESRKEH 405
Query: 191 K 191
K
Sbjct: 406 K 406
>gi|188532463|ref|YP_001906260.1| Stringent starvation protein B [Erwinia tasmaniensis Et1/99]
gi|188027505|emb|CAO95352.1| Stringent starvation protein B [Erwinia tasmaniensis Et1/99]
Length = 165
Score = 35.3 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 30/103 (29%), Gaps = 4/103 (3%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE----HIEEKLEG 153
DL++ ++ F VP ++ +P A+ Y F+ E E G
Sbjct: 62 DLELGNDEVRFSARFGGVPRQVSVPLAAVLAIYARENGAGTMFEPEPEYDGVDESEASNG 121
Query: 154 GNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
+ +SV+ D + V+
Sbjct: 122 EDQAPETVMSVIDGDRPDDSVTGDDGPDDEPPPRGGRPALRVV 164
>gi|262395274|ref|YP_003287128.1| stringent starvation protein B [Vibrio sp. Ex25]
gi|262338868|gb|ACY52663.1| stringent starvation protein B [Vibrio sp. Ex25]
Length = 156
Score = 35.3 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 13/99 (13%), Positives = 32/99 (32%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ ++ FS P +++P A++ Y F+ + + E
Sbjct: 57 NLELGNDAITFHARFSGRPHSVIVPVYAVQAIYARENGAGTMFEPEEAYTHIEEEAMTEE 116
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
+ S + S +++ + VI
Sbjct: 117 ESSPSFTTVSDEPSELASDSDAEEDDAPRPKGKPSLRVI 155
>gi|241952967|ref|XP_002419205.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223642545|emb|CAX42794.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 1120
Score = 35.3 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 8/131 (6%)
Query: 75 RISQNLRKNYPEKMTI-VIQNQFWDLKVLDNHFEVGLSFSNVPERLVI----PFNAIKGF 129
++ K YP + + V+ Q DL LD F V FS + L + F +I
Sbjct: 47 KLVTRFSKRYPRERKLRVLAFQNKDLCDLDPDFAVEDVFSESNDELRVLVDNKFRSITYT 106
Query: 130 YDPSVNFELEFDVHIE---HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKK 186
DP+++ + F + +E + P + S++ ++
Sbjct: 107 PDPAISTPINFSQAETIRGGVYSAVEKSDDNTTPKKPKKSPLSSPVSLAPPPPPPETKSN 166
Query: 187 QNKNKMASVIS 197
+ + + +S
Sbjct: 167 RKVPQKKNAVS 177
>gi|26249807|ref|NP_755847.1| ClpXP protease specificity-enhancing factor [Escherichia coli
CFT073]
gi|91212646|ref|YP_542632.1| ClpXP protease specificity-enhancing factor [Escherichia coli
UTI89]
gi|110643461|ref|YP_671191.1| ClpXP protease specificity-enhancing factor [Escherichia coli 536]
gi|117625512|ref|YP_858835.1| ClpXP protease specificity-enhancing factor [Escherichia coli APEC
O1]
gi|191174410|ref|ZP_03035913.1| stringent starvation protein B [Escherichia coli F11]
gi|218560290|ref|YP_002393203.1| ClpXP protease specificity-enhancing factor [Escherichia coli S88]
gi|218691510|ref|YP_002399722.1| ClpXP protease specificity-enhancing factor [Escherichia coli ED1a]
gi|227887942|ref|ZP_04005747.1| stringent starvation protein B [Escherichia coli 83972]
gi|237706027|ref|ZP_04536508.1| stringent starvation protein B [Escherichia sp. 3_2_53FAA]
gi|300979840|ref|ZP_07174735.1| stringent starvation protein B [Escherichia coli MS 200-1]
gi|300990952|ref|ZP_07179404.1| stringent starvation protein B [Escherichia coli MS 45-1]
gi|301047930|ref|ZP_07194976.1| stringent starvation protein B [Escherichia coli MS 185-1]
gi|306816437|ref|ZP_07450569.1| ClpXP protease specificity-enhancing factor [Escherichia coli
NC101]
gi|331649020|ref|ZP_08350108.1| stringent starvation protein B [Escherichia coli M605]
gi|331659508|ref|ZP_08360450.1| stringent starvation protein B [Escherichia coli TA206]
gi|26110235|gb|AAN82421.1|AE016767_181 Stringent starvation protein B [Escherichia coli CFT073]
gi|91074220|gb|ABE09101.1| stringent starvation protein B [Escherichia coli UTI89]
gi|110345053|gb|ABG71290.1| stringent starvation protein B [Escherichia coli 536]
gi|115514636|gb|ABJ02711.1| stringent starvation protein B [Escherichia coli APEC O1]
gi|190905300|gb|EDV64936.1| stringent starvation protein B [Escherichia coli F11]
gi|218367059|emb|CAR04830.1| ClpXP protease specificity-enhancing factor [Escherichia coli S88]
gi|218429074|emb|CAR10018.2| ClpXP protease specificity-enhancing factor [Escherichia coli ED1a]
gi|222034938|emb|CAP77681.1| Stringent starvation protein B [Escherichia coli LF82]
gi|226899067|gb|EEH85326.1| stringent starvation protein B [Escherichia sp. 3_2_53FAA]
gi|227835338|gb|EEJ45804.1| stringent starvation protein B [Escherichia coli 83972]
gi|281180262|dbj|BAI56592.1| stringent starvation protein B [Escherichia coli SE15]
gi|294489488|gb|ADE88244.1| stringent starvation protein B [Escherichia coli IHE3034]
gi|300300211|gb|EFJ56596.1| stringent starvation protein B [Escherichia coli MS 185-1]
gi|300307907|gb|EFJ62427.1| stringent starvation protein B [Escherichia coli MS 200-1]
gi|300407028|gb|EFJ90566.1| stringent starvation protein B [Escherichia coli MS 45-1]
gi|305850002|gb|EFM50461.1| ClpXP protease specificity-enhancing factor [Escherichia coli
NC101]
gi|307555313|gb|ADN48088.1| stringent starvation protein B [Escherichia coli ABU 83972]
gi|307625179|gb|ADN69483.1| ClpXP protease specificity-enhancing factor [Escherichia coli
UM146]
gi|312947778|gb|ADR28605.1| ClpXP protease specificity-enhancing factor [Escherichia coli
O83:H1 str. NRG 857C]
gi|315288979|gb|EFU48377.1| stringent starvation protein B [Escherichia coli MS 110-3]
gi|315294832|gb|EFU54171.1| stringent starvation protein B [Escherichia coli MS 153-1]
gi|315297912|gb|EFU57182.1| stringent starvation protein B [Escherichia coli MS 16-3]
gi|320194705|gb|EFW69335.1| ClpXP protease specificity-enhancing factor / Stringent starvation
protein B [Escherichia coli WV_060327]
gi|323951260|gb|EGB47135.1| stringent starvation protein B [Escherichia coli H252]
gi|323957632|gb|EGB53346.1| stringent starvation protein B [Escherichia coli H263]
gi|324008734|gb|EGB77953.1| stringent starvation protein B [Escherichia coli MS 57-2]
gi|324015885|gb|EGB85104.1| stringent starvation protein B [Escherichia coli MS 60-1]
gi|330909272|gb|EGH37786.1| clpXP protease specificity-enhancing factor / Stringent starvation
protein B [Escherichia coli AA86]
gi|331042767|gb|EGI14909.1| stringent starvation protein B [Escherichia coli M605]
gi|331054090|gb|EGI26119.1| stringent starvation protein B [Escherichia coli TA206]
Length = 165
Score = 35.3 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 31/88 (35%), Gaps = 5/88 (5%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE-----KLE 152
+L++ ++ F +P ++ +P A+ Y F+ + E+ E
Sbjct: 62 NLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGTMFEPEAAYDEDASIMNDEE 121
Query: 153 GGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
+ + S + DK + + +
Sbjct: 122 ASADNETVMSVIDGDKPDHDDETHPDDE 149
>gi|212645116|ref|NP_491384.2| Temporarily Assigned Gene name family member (tag-332)
[Caenorhabditis elegans]
gi|189217953|gb|AAK39326.3| Temporarily assigned gene name protein 332, isoform a, partially
confirmed by transcript evidence [Caenorhabditis
elegans]
Length = 850
Score = 35.3 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 27/61 (44%)
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
DP +F L F + +L ++ +P + T V++ S+ K+ + + ++
Sbjct: 346 DPVHSFGLRFQEVFDRRWAELGDSSSRASSVAPQSAPIAPTPKVAKSSAPKEPKESRKEH 405
Query: 191 K 191
K
Sbjct: 406 K 406
>gi|160900931|ref|YP_001566513.1| stringent starvation protein B [Delftia acidovorans SPH-1]
gi|160366515|gb|ABX38128.1| Stringent starvation protein B [Delftia acidovorans SPH-1]
Length = 176
Score = 35.3 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 37/112 (33%), Gaps = 14/112 (12%)
Query: 90 IVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEH 146
IV+ + L++ ++ F P +++P + Y + F
Sbjct: 50 IVLNVSYDATSGLQMGNDFISFTARFGGKPREIMVPVEQVMAIYARETGQGMAFPAPESD 109
Query: 147 IEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISL 198
+ E + ++ VSQD+ + + ++ ++S+
Sbjct: 110 ADADNE-----------VSMEQESDEPVSQDAVAEVPAEPAADERVVQLVSI 150
>gi|300718624|ref|YP_003743427.1| Stringent starvation protein B [Erwinia billingiae Eb661]
gi|299064460|emb|CAX61580.1| Stringent starvation protein B [Erwinia billingiae Eb661]
Length = 166
Score = 34.9 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 5/83 (6%)
Query: 98 DLKVLDNHFEVGLS--FSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGN 155
+L++ ++ EV + F VP ++ +P A+ Y F+ EE E
Sbjct: 62 NLELGND--EVTFNARFGGVPRQVTVPLAAVMAIYARENGAGTMFE-PEPVYEEAGEYNP 118
Query: 156 TGKVLTSPDNFDKNQTNSVSQDS 178
+ +P+ DS
Sbjct: 119 DSEQNDTPETVMSVIDGDRPDDS 141
>gi|163749355|ref|ZP_02156604.1| stringent starvation protein b [Shewanella benthica KT99]
gi|161331074|gb|EDQ02000.1| stringent starvation protein b [Shewanella benthica KT99]
Length = 172
Score = 34.9 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 14/108 (12%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
DL++ + E F V +++V+P AI Y FD+ + + + E G
Sbjct: 60 DLQIGHDFIEFNARFGGVSQQVVLPMAAIIAIYARENGAGTVFDME-DAYQVEAESEAAG 118
Query: 158 KVLTSPDNFDKNQTNS-------------VSQDSSKKKSTKKQNKNKM 192
+ P+ T V + +S KKS+ + K++
Sbjct: 119 LSVVKPEKATLTDTKRALSSVESSLSETLVPESASDKKSSDPEPKSRG 166
>gi|217969827|ref|YP_002355061.1| ClpXP protease specificity-enhancing factor [Thauera sp. MZ1T]
gi|217507154|gb|ACK54165.1| Stringent starvation protein B [Thauera sp. MZ1T]
Length = 156
Score = 34.9 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 27/92 (29%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L++ ++ F LVIP + Y + F+ +E +E+
Sbjct: 59 LQMANDFISFQARFGGAAHSLVIPVANVVAIYARENGQGMAFEPELEAVEDASVAVQDPS 118
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
D D + + + + +
Sbjct: 119 ADVVQDMSDTTAELRRERSAEPQPPARPPRGS 150
>gi|213512450|ref|NP_001134037.1| RING finger protein 10 [Salmo salar]
gi|209156254|gb|ACI34359.1| RING finger protein 10 [Salmo salar]
Length = 779
Score = 34.9 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 42/105 (40%), Gaps = 12/105 (11%)
Query: 92 IQNQF----WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
+++Q +L++ + L+ PE +V F++ K P + + FD + +
Sbjct: 379 LKHQKACTKDNLELS----SLTLADLPSPEEVVTIFSSTK----PVLQYSSAFDDEVAEV 430
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM 192
E+ G+ P+ + ++D++ + + ++
Sbjct: 431 PEEDPEVAPGEEPELPEGLLERVLEESTEDAAPEPQPAENPPSQA 475
>gi|223648032|gb|ACN10774.1| RING finger protein 10 [Salmo salar]
Length = 779
Score = 34.9 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 42/105 (40%), Gaps = 12/105 (11%)
Query: 92 IQNQF----WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
+++Q +L++ + L+ PE +V F++ K P + + FD + +
Sbjct: 379 LKHQKACTKDNLELS----SLTLADLPSPEEVVTIFSSTK----PVLQYSSAFDDEVAEV 430
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM 192
E+ G+ P+ + ++D++ + + ++
Sbjct: 431 PEEDPEVAPGEEPELPEGLLERVLEESTEDAAPEPQPAENPPSQA 475
>gi|209696066|ref|YP_002263996.1| ClpXP protease specificity-enhancing factor [Aliivibrio salmonicida
LFI1238]
gi|208010019|emb|CAQ80342.1| stringent starvation protein B [Aliivibrio salmonicida LFI1238]
Length = 151
Score = 34.9 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 42/112 (37%), Gaps = 7/112 (6%)
Query: 73 GVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGF 129
GVR+ + + + I++ + +L++ + FS P +++P AI+
Sbjct: 38 GVRVP----EEFIQDGQIILNTAPHSVGNLEMGNEAVTFNARFSGRPHSIIVPIYAIQAI 93
Query: 130 YDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKK 181
Y F+ + + EG + L S +N + + S +
Sbjct: 94 YARENGAGTMFEPEEAYEMDADEGIFEDESLDSTENTLSDDKPEPPRPSGRP 145
>gi|326318401|ref|YP_004236073.1| Stringent starvation protein B [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323375237|gb|ADX47506.1| Stringent starvation protein B [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 177
Score = 34.9 bits (79), Expect = 6.8, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 43/139 (30%), Gaps = 14/139 (10%)
Query: 69 TNARGVRISQNLR--KNYPEKMTIVIQNQFWD---LKVLDNHFEVGLSFSNVPERLVIPF 123
T VR+ +++ + Y + IV+ + L++ ++ E F P +++P
Sbjct: 28 TPYIAVRVDDSVQVPREYVKDGEIVLNISYDATSALQLGNDFIEFKARFGGKPRDIMVPV 87
Query: 124 NAIKGFYDPSVNFELEFDVHIEHIEE---------KLEGGNTGKVLTSPDNFDKNQTNSV 174
+ Y + F ++ + G T + P + V
Sbjct: 88 GRVIAIYARENGQGMAFPPPVDMLAPGAGGLSAGLLDAGAATEGTVPEPSADEDRVVQLV 147
Query: 175 SQDSSKKKSTKKQNKNKMA 193
D + + A
Sbjct: 148 PTDGGTGPADEPPRGPAPA 166
>gi|59712822|ref|YP_205598.1| ClpXP protease specificity-enhancing factor [Vibrio fischeri ES114]
gi|197336328|ref|YP_002157011.1| stringent starvation protein B [Vibrio fischeri MJ11]
gi|59480923|gb|AAW86710.1| ClpXP protease specificity-enhancing factor [Vibrio fischeri ES114]
gi|197317818|gb|ACH67265.1| stringent starvation protein B [Vibrio fischeri MJ11]
Length = 154
Score = 34.9 bits (79), Expect = 6.8, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 12/121 (9%)
Query: 73 GVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGF 129
GVR+ + + + IV+ + +L++ + FS P +++P AI+
Sbjct: 38 GVRVP----EEFVQDGQIVLNVAPHSVGNLEMGNEAVTFNARFSGRPHSIILPLYAIQAI 93
Query: 130 YDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK 189
Y F+ EE E + + N + ++ S D +
Sbjct: 94 YARENGAGTMFEP-----EEAYEMTDDEGIFEEETNLNAVSEDNTSSDDEPEPPRPSGRP 148
Query: 190 N 190
+
Sbjct: 149 S 149
>gi|311277813|ref|YP_003940044.1| Stringent starvation protein B [Enterobacter cloacae SCF1]
gi|308747008|gb|ADO46760.1| Stringent starvation protein B [Enterobacter cloacae SCF1]
Length = 161
Score = 34.9 bits (79), Expect = 6.8, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 23/68 (33%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ ++ F VP ++ +P A+ Y F+ + EE +
Sbjct: 62 NLELSNDEVRFNARFGGVPRQVSVPLAAVLAVYARENGAGTMFEPEAAYDEEVESLNDDA 121
Query: 158 KVLTSPDN 165
D
Sbjct: 122 GASAESDT 129
>gi|323527500|ref|YP_004229653.1| Stringent starvation protein B [Burkholderia sp. CCGE1001]
gi|323384502|gb|ADX56593.1| Stringent starvation protein B [Burkholderia sp. CCGE1001]
Length = 175
Score = 34.9 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 40/131 (30%), Gaps = 5/131 (3%)
Query: 69 TNARGVRISQNLR--KNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPF 123
T VR+ + R + + IV+ F L++ + E FS ++ +P
Sbjct: 24 TPHIAVRVDNHTRVPRQFVRDNEIVLNISFEATSQLQMGNEWVEFSARFSGKSHKIEVPV 83
Query: 124 NAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKS 183
I Y + F V E + G + V ++ + S +
Sbjct: 84 ANILAIYARENGQGMAFPVESTGGEAQDSGADAEAVESAQPAEPVASPAAPRAVESPSAA 143
Query: 184 TKKQNKNKMAS 194
++
Sbjct: 144 DAAAKADRAPE 154
>gi|271498883|ref|YP_003331908.1| stringent starvation protein B [Dickeya dadantii Ech586]
gi|270342438|gb|ACZ75203.1| Stringent starvation protein B [Dickeya dadantii Ech586]
Length = 168
Score = 34.9 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 28/91 (30%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ D+ F VP ++ +P ++ Y F+ + + G
Sbjct: 62 NLELADDSVRFNARFGGVPRQVFVPMASVMAIYARENGAGTMFEPEPAYEIVEEFGVQPH 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQN 188
S N S +++ +
Sbjct: 122 SEEESRPTLMSVVDNEPSSPAAESEPQPDDE 152
>gi|260596156|ref|YP_003208727.1| ClpXP protease specificity-enhancing factor [Cronobacter turicensis
z3032]
gi|260215333|emb|CBA27311.1| Stringent starvation protein B [Cronobacter turicensis z3032]
Length = 163
Score = 34.5 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 10/96 (10%), Positives = 25/96 (26%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ ++ F VP ++ +P A+ Y F+ + EE +
Sbjct: 62 NLELANDEVRFNARFGGVPRQVSVPLAAVLAIYARENGAGTMFEPEAAYDEEMASLNDDN 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ + +
Sbjct: 122 SAEEPETVMSVIDGDKPDDADDNGPDDEPPPRGGRP 157
>gi|308189061|ref|YP_003933192.1| Stringent starvation protein B [Pantoea vagans C9-1]
gi|308059571|gb|ADO11743.1| Stringent starvation protein B [Pantoea vagans C9-1]
Length = 161
Score = 34.5 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 11/99 (11%), Positives = 27/99 (27%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L + ++ F VP ++ +P AI Y F+ + E
Sbjct: 62 NLDLANDQVSFNARFGGVPRQVNVPMAAILAIYARENGAGTMFEPEPAYELGMQEASEGQ 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
+ ++ ++ + V+
Sbjct: 122 EETMMSVIDGDRPDDASDDETPPDDDPPPRGGRPSLRVV 160
>gi|323961123|gb|EGB56737.1| stringent starvation protein B [Escherichia coli H489]
Length = 165
Score = 34.5 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 31/88 (35%), Gaps = 5/88 (5%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE-----KLE 152
+L++ ++ F +P ++ +P A+ Y F+ + E+ E
Sbjct: 62 NLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGTMFEPEAAYDEDTSIMNDEE 121
Query: 153 GGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
+ + S + DK + + +
Sbjct: 122 ASADNETVMSVIDGDKPDHDDNTHPDDE 149
>gi|28871558|ref|NP_794177.1| stringent starvation protein B [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28854809|gb|AAO57872.1| stringent starvation protein B [Pseudomonas syringae pv. tomato
str. DC3000]
gi|330877149|gb|EGH11298.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. morsprunorum str. M302280PT]
gi|330964041|gb|EGH64301.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. actinidiae str. M302091]
gi|331016718|gb|EGH96774.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. lachrymans str. M302278PT]
Length = 137
Score = 34.5 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 18/49 (36%)
Query: 97 WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
L + ++ F VP L +P AI G Y + FD+
Sbjct: 56 RHLHMDNDAVSFEGRFGGVPHTLYVPVAAILGIYARENGQGMVFDLEPS 104
>gi|262273828|ref|ZP_06051641.1| stringent starvation protein B [Grimontia hollisae CIP 101886]
gi|262222243|gb|EEY73555.1| stringent starvation protein B [Grimontia hollisae CIP 101886]
Length = 158
Score = 34.5 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 1/92 (1%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ + F P + +P A+ Y FD EE+L +
Sbjct: 62 NLELGNEKVSFNARFGGRPMLVTVPLYAVMAIYARENGAGTMFD-PEPAYEEELAHLDAE 120
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK 189
L + + ++ S D S + K
Sbjct: 121 PELNAVEQDTQDAPQQGSDDESVTELRPKGRP 152
>gi|260767171|ref|ZP_05876114.1| stringent starvation protein B [Vibrio furnissii CIP 102972]
gi|260617845|gb|EEX43021.1| stringent starvation protein B [Vibrio furnissii CIP 102972]
gi|315181144|gb|ADT88058.1| ClpXP protease specificity-enhancing factor [Vibrio furnissii NCTC
11218]
Length = 162
Score = 34.5 bits (78), Expect = 8.9, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 38/102 (37%), Gaps = 5/102 (4%)
Query: 98 DLKVLDNHFEVGLS--FSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGG- 154
+L++ ++ EV + F P +V+P A++ Y F+ +++E G
Sbjct: 62 NLELGND--EVTFNARFGGRPHLVVVPMYAVQAIYARENGAGTMFEPEAAYMDEHEVGIF 119
Query: 155 NTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
T+ + + + + S+ + + V+
Sbjct: 120 EEDDEETTESGLSEVTSELPTVEDSEPEDAPRPKGKPSLRVV 161
>gi|153002265|ref|YP_001367946.1| ClpXP protease specificity-enhancing factor [Shewanella baltica
OS185]
gi|160876989|ref|YP_001556305.1| ClpXP protease specificity-enhancing factor [Shewanella baltica
OS195]
gi|217974852|ref|YP_002359603.1| ClpXP protease specificity-enhancing factor [Shewanella baltica
OS223]
gi|304410923|ref|ZP_07392540.1| Stringent starvation protein B [Shewanella baltica OS183]
gi|307304906|ref|ZP_07584656.1| Stringent starvation protein B [Shewanella baltica BA175]
gi|151366883|gb|ABS09883.1| Stringent starvation protein B [Shewanella baltica OS185]
gi|160862511|gb|ABX51045.1| Stringent starvation protein B [Shewanella baltica OS195]
gi|217499987|gb|ACK48180.1| Stringent starvation protein B [Shewanella baltica OS223]
gi|304350820|gb|EFM15221.1| Stringent starvation protein B [Shewanella baltica OS183]
gi|306912308|gb|EFN42732.1| Stringent starvation protein B [Shewanella baltica BA175]
gi|315269192|gb|ADT96045.1| Stringent starvation protein B [Shewanella baltica OS678]
Length = 145
Score = 34.5 bits (78), Expect = 9.2, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 35/99 (35%), Gaps = 14/99 (14%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ + E F VP+++++P +I Y FD+
Sbjct: 60 NLQISNEFVEFNARFGGVPQQVMLPMASIVAIYARENGAGTVFDI--------------E 105
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
D D + + + D + + + + + +V+
Sbjct: 106 DAYLVDDEVDSSLSVVETNDKAPEPTDEPPKRRSHLTVV 144
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.310 0.146 0.469
Lambda K H
0.267 0.0444 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,198,032,154
Number of Sequences: 14124377
Number of extensions: 197290098
Number of successful extensions: 525835
Number of sequences better than 10.0: 648
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 193
Number of HSP's that attempted gapping in prelim test: 524441
Number of HSP's gapped (non-prelim): 1005
length of query: 204
length of database: 4,842,793,630
effective HSP length: 132
effective length of query: 72
effective length of database: 2,978,375,866
effective search space: 214443062352
effective search space used: 214443062352
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 78 (34.5 bits)