HHsearch results for GI: 254780956 and protein with PDBid: 1bkp_A
>1bkp_A Thymidylate synthase A; methyltransferase, DTMP synthase; 1.70A {Bacillus subtilis} SCOP: d.117.1.1 PDB: 1bko_A 1bsf_A 1bsp_A 1b02_A*
Probab=100.00 E-value=0 Score=698.81 Aligned_cols=262 Identities=40% Similarity=0.735 Sum_probs=254.3
Q ss_pred HHHHHHHHHHHHCCCEE----------CCCCCCCEEEEEECEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHCCCCC-HH
Q ss_conf 57999999998639260----------37998534777612046442369810464202268899999998536664-68
Q gi|254780956|r 2 HQYLDLLRHVIKFGSDR----------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VS 70 (264)
Q Consensus 2 ~qYl~l~~~il~~G~~~----------~dRtG~~t~s~fg~~~~~dl~~gfPllTtkk~~~k~~i~EllW~l~G~tn-~~ 70 (264)
|||++|+++||+||+.+ .||||++|+|+||+++|||++ +||||||||++||++++|++|||+|+|| ++
T Consensus 5 ~qYl~ll~~Il~~G~~~~~~~~r~~~~~drtg~~t~sifg~~~~~d~~-~fPllTtKk~~~k~~i~EllWfl~G~tn~~~ 83 (278)
T 1bkp_A 5 KQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNS-EVPILTTKKVAWKTAIKELLWIWQLKSNDVN 83 (278)
T ss_dssp HHHHHHHHHHHHHCEECTTSCCCCBBTTTCCBCCEEEEEEEEEEECSS-SCCCCSSSCCCHHHHHHHHHHHHTSCCCBHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCC-CCCCEEECCCCHHHHHHHHHHHHHCCCCCHH
T ss_conf 999999999998486743444444324688888768865715897189-9970142030389999999999716874156
Q ss_pred HHHHHCCCHHHHHHHHHCCCCCCCCCHHHCC-CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCCCCCC
Q ss_conf 8864003213565421001387662010003-677532688999999999808852367775169888320242113540
Q gi|254780956|r 71 YLHRHGVSIWDEWADKDGELGPIYGVQWRSW-PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 (264)
Q Consensus 71 ~l~~~~~~iWd~~a~~~g~lg~~YG~qwR~~-~~~~~~~~DQl~~vi~~Lk~np~sRR~i~~~wnp~~~~~~~lpPC~~~ 149 (264)
+|.++|++||++|++++|++|++||+|||++ ..+.++++||+++||++||+||+|||+|+++|||+++++|+|||||+.
T Consensus 84 ~l~~~~~~iW~~~~~~~g~~~~~YG~~~~~~~~~~~~~~~DQl~~vi~~Lk~nP~sRR~ii~~wnp~~~~~~~lpPC~~~ 163 (278)
T 1bkp_A 84 DLNMMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYE 163 (278)
T ss_dssp HHHTTTCCTTGGGCCTTSBCBSCTHHHHHCCCEEETTEEECHHHHHHHHHHHSTTCSCCEEESCCTTTGGGBSSCCSEEE
T ss_pred HHHHCCCCEEHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCEECCCCCHHHHCCCCCCCEEEE
T ss_conf 78762663012105455535776673330241356886522558899987029742320010368166537877742567
Q ss_pred EEEEECCCEEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCE
Q ss_conf 24667688059999726244022202167999999999997622421111352273021003689999983369876877
Q gi|254780956|r 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 (264)
Q Consensus 150 ~qf~v~~g~L~~~~~qRS~D~~lG~pfNi~~y~lL~~~iA~~~gl~~G~~~~~~~d~HIY~nH~~~vk~ql~R~p~~~P~ 229 (264)
+||+|++|+|+|++||||||++||+||||++|++|++|||+.||++||+|+|++||+|||+||+|++++||+|+|+++|+
T Consensus 164 ~qf~v~~g~L~~~~~qRS~D~~lG~pfNi~syalL~~~iA~~~gl~~G~~~~~~gd~HIY~~h~~~v~~ql~R~p~~~P~ 243 (278)
T 1bkp_A 164 TQWYVKHGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPE 243 (278)
T ss_dssp EEEEEETTEEEEEEEEEEEETTTTHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEEEEEEGGGHHHHHHHHHSCCCCCCE
T ss_pred EEEEEECCCCEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEHHHHHHHHHHHCCCCCCCCE
T ss_conf 99998089737999814155563378519999999999999729977548998401476374799999985789999998
Q ss_pred EEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 99648868711262033799768768887875569
Q gi|254780956|r 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 (264)
Q Consensus 230 L~i~~~~~~i~d~~~eDf~L~~Y~~hp~Ik~~mAV 264 (264)
|+|++++++|+||++|||+|+||+|||+|||||||
T Consensus 244 l~i~~~~~~i~d~~~~Df~l~~Y~~~p~ik~~~aV 278 (278)
T 1bkp_A 244 LWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV 278 (278)
T ss_dssp EEECTTCCSGGGCCGGGEEEESCCCCCCCCCCCBC
T ss_pred EEECCCCCCCCCCCHHHEEEECCCCCCCCCCCCCC
T ss_conf 89789988531398607799798789988757619