HHsearch results for GI: 254780956 and protein with PDBid: 1f28_A
>1f28_A Thymidylate synthase; beta-sheet, protein-inhibitor complex, transferase; HET: UMP F89; 1.90A {Pneumocystis carinii} SCOP: d.117.1.1 PDB: 1ci7_A*
Probab=100.00 E-value=0 Score=749.36 Aligned_cols=263 Identities=50% Similarity=0.947 Sum_probs=255.8
Q ss_pred HHHHHHHHHHHHCCCEECCCCCCCEEEEEE-CEEEEECC-CCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHCCCH
Q ss_conf 579999999986392603799853477761-20464423-6981046420226889999999853666468886400321
Q gi|254780956|r 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDLS-KGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 (264)
Q Consensus 2 ~qYl~l~~~il~~G~~~~dRtG~~t~s~fg-~~~~~dl~-~gfPllTtkk~~~k~~i~EllW~l~G~tn~~~l~~~~~~i 79 (264)
+||++|+++||++|+.++||||++|+|+|| .+|||||+ +|||||||||||||++++||||||+|+||+++|+++||||
T Consensus 7 ~qYl~l~~~IL~~G~~~~dRtG~gt~s~Fg~~~~rfdL~~~gFPlLTTKkv~~k~vi~ELlWfl~G~tn~~~L~~~~v~i 86 (297)
T 1f28_A 7 QQYLNLVQYIINHGEDRPDRTGTGTLSVFAPSPLKFSLRNKTFPLLTTKRVFIRGVIEELLWFIRGETDSLKLREKNIHI 86 (297)
T ss_dssp HHHHHHHHHHHHHCEEEECTTSSEEEEEESCCCEEEECGGGBCCCCSSSCCCHHHHHHHHHHHHTTCCBHHHHHTTTCCT
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
T ss_conf 99999999999839886887898459872373158855789854255230349999999999981797478887512010
Q ss_pred HHHHHHH------------HCCCCCCCCCHHHCCC--------CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHH
Q ss_conf 3565421------------0013876620100036--------7753268899999999980885236777516988832
Q gi|254780956|r 80 WDEWADK------------DGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139 (264)
Q Consensus 80 Wd~~a~~------------~g~lg~~YG~qwR~~~--------~~~~~~~DQl~~vi~~Lk~np~sRR~i~~~wnp~~~~ 139 (264)
||+|+++ +|++||+||+|||+|+ +|.++++|||++||++||+||+|||+|+++|||++++
T Consensus 87 Wd~~~~~~~~~~~~~~~~~~gdlGp~YG~qwr~~g~~y~~~~~~~~~~~~DQl~~vi~~Lk~nP~sRR~iis~Wnp~~l~ 166 (297)
T 1f28_A 87 WDANGSREYLDSIGLTKRQEGDLGPIYGFQWRHFGAEYIDCKTNYIGQGVDQLANIIQKIRTSPYDRRLILSAWNPADLE 166 (297)
T ss_dssp THHHHSHHHHHHTTCTTSCTTBCCSCHHHHHHHBTCCCCCTTSCCTTCSBCHHHHHHHHHHHCTTCSCCEEECCCTTTGG
T ss_pred CCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHC
T ss_conf 00001134454327765657875520115777438765455457888663399999998622987645899727877835
Q ss_pred HCCCCCCCCCEEEEEC------CCEEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEHHHH
Q ss_conf 0242113540246676------8805999972624402220216799999999999762242111135227302100368
Q gi|254780956|r 140 KMALPPCHCLFQFYVD------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 (264)
Q Consensus 140 ~~~lpPC~~~~qf~v~------~g~L~~~~~qRS~D~~lG~pfNi~~y~lL~~~iA~~~gl~~G~~~~~~~d~HIY~nH~ 213 (264)
+|||||||+.+||+|+ +|+|+|++||||+|+|||+|||||+|++|++|||++||++||+|+|++||+|||+||+
T Consensus 167 ~~aLpPCh~~~qf~V~~~~~~~~~~L~~~~~QRS~D~~LG~PfNiasyalL~~~iA~~~gl~~G~~~~~~gd~HIY~nH~ 246 (297)
T 1f28_A 167 KMALPPCHMFCQFYVHIPSNNHRPELSCQLYQRSCDMGLGVPFNIASYALLTCMIAHVCDLDPGDFIHVMGDCHIYKDHI 246 (297)
T ss_dssp GSSSCCSEEEEEEEECCCSTTSCCEEEEEEEEEEEETTTHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEEEEEEHHHH
T ss_pred CCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECEEEEHHHHH
T ss_conf 37888762368999955777877638899996248865330244999999999999970887756999812246438689
Q ss_pred HHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 999998336987687799648868711262033799768768887875569
Q gi|254780956|r 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 (264)
Q Consensus 214 ~~vk~ql~R~p~~~P~L~i~~~~~~i~d~~~eDf~L~~Y~~hp~Ik~~mAV 264 (264)
|++++||+|+|+++|+|+|++++++|+||++|||+|+||+|||+|||||||
T Consensus 247 e~v~eql~R~p~~~P~l~i~~~~~~i~d~~~~Df~l~~Y~~hp~Ik~~~aV 297 (297)
T 1f28_A 247 EALQQQLTRSPRPFPTLSLNRSITDIEDFTLDDFNIQNYHPYETIKMKMSI 297 (297)
T ss_dssp HHHHTGGGSCCCCCCEEEECSCCCSGGGCCGGGEEEESCCCCCCCCCCCCC
T ss_pred HHHHHHHCCCCCCCCEEEECCCCCCHHCCCEEEEEEECCCCCCCCCCCCCC
T ss_conf 999998568999999888589988550397024799796688887757629