HHsearch results for GI: 254780956 and protein with PDBid: 1tis_A
>1tis_A Thymidylate synthase; transferase(methyltransferase); 2.70A {Enterobacteria phage T4} SCOP: d.117.1.1
Probab=100.00 E-value=0 Score=703.47 Aligned_cols=259 Identities=46% Similarity=0.841 Sum_probs=247.5
Q ss_pred CHHHHHHHHHHHHCCCEECCCCCCCEEEEEECEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHH-----
Q ss_conf 957999999998639260379985347776120464423698104642022688999999985366646888640-----
Q gi|254780956|r 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRH----- 75 (264)
Q Consensus 1 m~qYl~l~~~il~~G~~~~dRtG~~t~s~fg~~~~~dl~~gfPllTtkk~~~k~~i~EllW~l~G~tn~~~l~~~----- 75 (264)
||||++|+++||++|+.++||||++|+|+||+++||||++|||||||||++||++++|++|||+|+||+++|++.
T Consensus 1 MkQYl~ll~~IL~~G~~~~dRtG~~T~svFG~~~rfdl~~gfPlLTTKkv~~k~~i~ELlWfl~G~tni~~L~~~~~~~~ 80 (286)
T 1tis_A 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGSKLRWDLTKGFPAVTTKKLAWKACIAELIWFLSGSTNVNDLRLIQHDSL 80 (286)
T ss_dssp CCHHHHHHHHHHTTCCEECCSSCSCEEEEECCEEEEEGGGCCCCCCSSCCCCHHHHHHHHHHHHTCCBHHHHHHHHHSCS
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
T ss_conf 96899999999985988569999876886032378637779972232121057789999999836987999997505553
Q ss_pred --CCCHHHHH--------HHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCC
Q ss_conf --03213565--------42100138766201000367753268899999999980885236777516988832024211
Q gi|254780956|r 76 --GVSIWDEW--------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145 (264)
Q Consensus 76 --~~~iWd~~--------a~~~g~lg~~YG~qwR~~~~~~~~~~DQl~~vi~~Lk~np~sRR~i~~~wnp~~~~~~~lpP 145 (264)
+.++|+++ +.++|++|++||+|||+|. ++||+++||++||+||+|||+|+++|||.++++|++||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g~lG~~YG~qwR~~~-----~~DQl~~vi~~Lk~~p~sRR~i~s~wnp~~~~~~~lpP 155 (286)
T 1tis_A 81 IQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDFG-----GVDQIIEVIDRIKKLPNDRRQIVSAWNPAELKYMALPP 155 (286)
T ss_dssp SSSCCTTHHHHTTTTGGGTCCTTBCCSCHHHHHHCBT-----TBCHHHHHHHHHHHSTTCSCCBCCCCCGGGGGGCSSCC
T ss_pred CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEECCCC-----CCCHHHHHHHHHHHCCCHHHEEEECCCHHHHCCCCCCC
T ss_conf 3665234210000222221458861532362432689-----72699999999864985013000015876612678865
Q ss_pred CCCCEEEEECCCEEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCC
Q ss_conf 35402466768805999972624402220216799999999999762242111135227302100368999998336987
Q gi|254780956|r 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 (264)
Q Consensus 146 C~~~~qf~v~~g~L~~~~~qRS~D~~lG~pfNi~~y~lL~~~iA~~~gl~~G~~~~~~~d~HIY~nH~~~vk~ql~R~p~ 225 (264)
||..+||+|++|+|+|+++|||||++||+|||+++|++|++|||++||++||+|+|++||+|||+||++++++||+|+|+
T Consensus 156 C~~~~qf~v~~~~L~~~~~qRS~D~~lG~p~Ni~~~~~L~~~iA~~~gl~~G~~~~~~~d~HIY~~h~~~~~~ql~R~p~ 235 (286)
T 1tis_A 156 CHMFYQFNVRNGYLDLQWYQRSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235 (286)
T ss_dssp SEEEEEEEECSSEEEEEEEEEEEETTTTHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEEEEEESSCCTTTGGGSSCCCC
T ss_pred CCEEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEHHHHHHHHHHHCCCCC
T ss_conf 64046889659808999985154401446515999999999999985566752899714348637479999999667998
Q ss_pred CCCEEEECC------------CCCCCCCCCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 687799648------------868711262033799768768887875569
Q gi|254780956|r 226 TLPQMIINP------------NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 (264)
Q Consensus 226 ~~P~L~i~~------------~~~~i~d~~~eDf~L~~Y~~hp~Ik~~mAV 264 (264)
++|+|+|++ ++++|++|++|||+|+||+|||+|||||||
T Consensus 236 ~~P~l~i~~~~~~~~~~~~~~~~~~i~~~~~~Df~l~~Y~~hp~ik~~~av 286 (286)
T 1tis_A 236 ELCELVISGLPYKFRYLSTKEQLKYVLKLRPKDFVLNNYVSHPPIKGKMAV 286 (286)
T ss_dssp SCCCCEECCCCGGGGGSCHHHHHHHHHTCCGGGEECSSCCCCCCCCCCCCC
T ss_pred CCCCEEECCCCCCCCCCCCCCCCCHHHCCCHHHEEEECCCCCCCCCCCCCC
T ss_conf 898068657865443222344556040398226799797789987757629