HHsearch results for GI: 254780956 and protein with PDBid: 1tis_A

>1tis_A Thymidylate synthase; transferase(methyltransferase); 2.70A {Enterobacteria phage T4} SCOP: d.117.1.1
Probab=100.00  E-value=0  Score=703.47  Aligned_cols=259  Identities=46%  Similarity=0.841  Sum_probs=247.5

Q ss_pred             CHHHHHHHHHHHHCCCEECCCCCCCEEEEEECEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHH-----
Q ss_conf             957999999998639260379985347776120464423698104642022688999999985366646888640-----
Q gi|254780956|r    1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRH-----   75 (264)
Q Consensus         1 m~qYl~l~~~il~~G~~~~dRtG~~t~s~fg~~~~~dl~~gfPllTtkk~~~k~~i~EllW~l~G~tn~~~l~~~-----   75 (264)
                      ||||++|+++||++|+.++||||++|+|+||+++||||++|||||||||++||++++|++|||+|+||+++|++.     
T Consensus         1 MkQYl~ll~~IL~~G~~~~dRtG~~T~svFG~~~rfdl~~gfPlLTTKkv~~k~~i~ELlWfl~G~tni~~L~~~~~~~~   80 (286)
T 1tis_A            1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGSKLRWDLTKGFPAVTTKKLAWKACIAELIWFLSGSTNVNDLRLIQHDSL   80 (286)
T ss_dssp             CCHHHHHHHHHHTTCCEECCSSCSCEEEEECCEEEEEGGGCCCCCCSSCCCCHHHHHHHHHHHHTCCBHHHHHHHHHSCS
T ss_pred             CHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
T ss_conf             96899999999985988569999876886032378637779972232121057789999999836987999997505553


Q ss_pred             --CCCHHHHH--------HHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCC
Q ss_conf             --03213565--------42100138766201000367753268899999999980885236777516988832024211
Q gi|254780956|r   76 --GVSIWDEW--------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP  145 (264)
Q Consensus        76 --~~~iWd~~--------a~~~g~lg~~YG~qwR~~~~~~~~~~DQl~~vi~~Lk~np~sRR~i~~~wnp~~~~~~~lpP  145 (264)
                        +.++|+++        +.++|++|++||+|||+|.     ++||+++||++||+||+|||+|+++|||.++++|++||
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~g~lG~~YG~qwR~~~-----~~DQl~~vi~~Lk~~p~sRR~i~s~wnp~~~~~~~lpP  155 (286)
T 1tis_A           81 IQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDFG-----GVDQIIEVIDRIKKLPNDRRQIVSAWNPAELKYMALPP  155 (286)
T ss_dssp             SSSCCTTHHHHTTTTGGGTCCTTBCCSCHHHHHHCBT-----TBCHHHHHHHHHHHSTTCSCCBCCCCCGGGGGGCSSCC
T ss_pred             CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEECCCC-----CCCHHHHHHHHHHHCCCHHHEEEECCCHHHHCCCCCCC
T ss_conf             3665234210000222221458861532362432689-----72699999999864985013000015876612678865


Q ss_pred             CCCCEEEEECCCEEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCC
Q ss_conf             35402466768805999972624402220216799999999999762242111135227302100368999998336987
Q gi|254780956|r  146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR  225 (264)
Q Consensus       146 C~~~~qf~v~~g~L~~~~~qRS~D~~lG~pfNi~~y~lL~~~iA~~~gl~~G~~~~~~~d~HIY~nH~~~vk~ql~R~p~  225 (264)
                      ||..+||+|++|+|+|+++|||||++||+|||+++|++|++|||++||++||+|+|++||+|||+||++++++||+|+|+
T Consensus       156 C~~~~qf~v~~~~L~~~~~qRS~D~~lG~p~Ni~~~~~L~~~iA~~~gl~~G~~~~~~~d~HIY~~h~~~~~~ql~R~p~  235 (286)
T 1tis_A          156 CHMFYQFNVRNGYLDLQWYQRSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK  235 (286)
T ss_dssp             SEEEEEEEECSSEEEEEEEEEEEETTTTHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEEEEEESSCCTTTGGGSSCCCC
T ss_pred             CCEEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEHHHHHHHHHHHCCCCC
T ss_conf             64046889659808999985154401446515999999999999985566752899714348637479999999667998


Q ss_pred             CCCEEEECC------------CCCCCCCCCCCCEEEECCCCCCCCCCCCCC
Q ss_conf             687799648------------868711262033799768768887875569
Q gi|254780956|r  226 TLPQMIINP------------NIVDLLSFRYEDFTLRSYEPHAAILAKVSV  264 (264)
Q Consensus       226 ~~P~L~i~~------------~~~~i~d~~~eDf~L~~Y~~hp~Ik~~mAV  264 (264)
                      ++|+|+|++            ++++|++|++|||+|+||+|||+|||||||
T Consensus       236 ~~P~l~i~~~~~~~~~~~~~~~~~~i~~~~~~Df~l~~Y~~hp~ik~~~av  286 (286)
T 1tis_A          236 ELCELVISGLPYKFRYLSTKEQLKYVLKLRPKDFVLNNYVSHPPIKGKMAV  286 (286)
T ss_dssp             SCCCCEECCCCGGGGGSCHHHHHHHHHTCCGGGEECSSCCCCCCCCCCCCC
T ss_pred             CCCCEEECCCCCCCCCCCCCCCCCHHHCCCHHHEEEECCCCCCCCCCCCCC
T ss_conf             898068657865443222344556040398226799797789987757629