HHsearch results for GI: 254780956 and protein with PDBid: 3ik0_A
>3ik0_A TS, tsase, thymidylate synthase; transferase, nucleotide synthase, methyltransferase, nucleot biosynthesis; HET: 7C1 UMP; 2.10A {Lactobacillus casei} PDB: 1lcb_A* 1lce_A* 1lca_A* 1thy_A* 1tsl_A* 1tsm_A* 2tdm_A* 3bnz_A* 3byx_A* 3bz0_A* 3c06_A* 3c0a_A* 1nje_A* 3ijz_A* 3ik1_A* 4tms_A 1tsy_A* 1tsz_A 1tdb_A* 1tda_A* ...
Probab=100.00 E-value=0 Score=742.28 Aligned_cols=263 Identities=55% Similarity=0.994 Sum_probs=259.7
Q ss_pred HHHHHHHHHHHHCCCEECCCCCCCEEEEEECEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHH
Q ss_conf 57999999998639260379985347776120464423698104642022688999999985366646888640032135
Q gi|254780956|r 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD 81 (264)
Q Consensus 2 ~qYl~l~~~il~~G~~~~dRtG~~t~s~fg~~~~~dl~~gfPllTtkk~~~k~~i~EllW~l~G~tn~~~l~~~~~~iWd 81 (264)
+|||+||++||++|+.++||||++|+|+||.++||||++|||||||||+|||++++||+|||+|+||++.|+++||||||
T Consensus 4 ~qYl~l~~~Il~~G~~~~dRTg~~T~s~fG~~~r~dl~~gfPlLTTKkv~~k~vi~ELlWfl~G~tn~~~L~~~gv~IWd 83 (316)
T 3ik0_A 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFLHGDTNIRFLLQHRNHIWD 83 (316)
T ss_dssp HHHHHHHHHHHHHCEEEEETTTEEEEEEESCEEEEEGGGCCCCCSSSCCCHHHHHHHHHHHHTTCCBHHHHHTTTCCTTH
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
T ss_conf 99999999999829886788988669982124798333598646642043888999999998189447899974997657
Q ss_pred HHHHHH--------------------------------------------------CCCCCCCCCHHHCCCCCCCCHHHH
Q ss_conf 654210--------------------------------------------------013876620100036775326889
Q gi|254780956|r 82 EWADKD--------------------------------------------------GELGPIYGVQWRSWPDYDGNVIDQ 111 (264)
Q Consensus 82 ~~a~~~--------------------------------------------------g~lg~~YG~qwR~~~~~~~~~~DQ 111 (264)
+||+++ |++|++||+|||+|..+.++++||
T Consensus 84 ~~a~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GdlG~~YG~qwR~~~~~~~~~~DQ 163 (316)
T 3ik0_A 84 EWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQ 163 (316)
T ss_dssp HHHHHHHTTSSSCCSSCCTTHHHHHHHCHHHHHHHHHHHHHHHHHHHHCHHHHHHHTBCSSSHHHHHHCEECTTSCEECH
T ss_pred CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEECCCCCCCHHHH
T ss_conf 52366544211114765577761204462102001567877766422344322356766665531212202578748789
Q ss_pred HHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCCCCCCEEEEECCCEEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 99999999808852367775169888320242113540246676880599997262440222021679999999999976
Q gi|254780956|r 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 (264)
Q Consensus 112 l~~vi~~Lk~np~sRR~i~~~wnp~~~~~~~lpPC~~~~qf~v~~g~L~~~~~qRS~D~~lG~pfNi~~y~lL~~~iA~~ 191 (264)
+++||++||+||+|||+|+++|||.++++|+|||||+.+||+|++|+|+|+++|||||++||+||||++|++|++|||+.
T Consensus 164 l~~vI~~Lk~~P~sRR~i~s~Wnp~d~~~~~l~PC~~~~qf~v~~g~L~l~~~qRS~D~~lG~pfNi~~y~~L~~~iA~~ 243 (316)
T 3ik0_A 164 LGDVIEQIKTHPYSRRLIVSAWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 (316)
T ss_dssp HHHHHHHHHHCTTCSCCEEECCCTTTTTTSSSCCSEEEEEEEEETTEEEEEEEEEEEETTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCHHEEEECCCHHHHCCCCCCCCCCEEEEEEECCEEEEEEEEECCCHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 99999985259864220554068889607887546744899984891799999625223321368999999999999986
Q ss_pred HCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 2242111135227302100368999998336987687799648868711262033799768768887875569
Q gi|254780956|r 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 (264)
Q Consensus 192 ~gl~~G~~~~~~~d~HIY~nH~~~vk~ql~R~p~~~P~L~i~~~~~~i~d~~~eDf~L~~Y~~hp~Ik~~mAV 264 (264)
||++||+|+|++||+|||+||+|++++||+|+|+++|+|+|++++++|+||++|||+|+||+|||+|||||||
T Consensus 244 ~gl~~G~~~~~~gd~HIY~~h~~~v~~qL~R~p~~~P~l~i~~~~~~i~d~~~~Df~l~~Y~~hp~Ik~~~AV 316 (316)
T 3ik0_A 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYDPYPAIKAPVAV 316 (316)
T ss_dssp HTCEEEEEEEEEEEEEEETTSHHHHHHHTTSCCCCCCEEEECTTCCCGGGCCGGGEEEECCCCCCCCCC----
T ss_pred CCCCCCEEEEEEEEEEEEHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHEEEECCCCCCCCCCCCCC
T ss_conf 0983044899610358627479999998477999998579799988502498347799798688887747649