HHsearch results for GI: 254780956 and protein with PDBid: 3kgb_A
>3kgb_A Thymidylate synthase 1/2; ssgcid, NIH, niaid, SBRI, UW, decode, methyltransferase, nucleotide biosynthesis, transferase; 2.20A {Encephalitozoon cuniculi gb-m1}
Probab=100.00 E-value=0 Score=733.98 Aligned_cols=264 Identities=52% Similarity=0.990 Sum_probs=257.2
Q ss_pred CHHHHHHHHHHHHCCCEECCCCCCCEEEEEECEEEEECCCC-CCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHCCCH
Q ss_conf 95799999999863926037998534777612046442369-81046420226889999999853666468886400321
Q gi|254780956|r 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 (264)
Q Consensus 1 m~qYl~l~~~il~~G~~~~dRtG~~t~s~fg~~~~~dl~~g-fPllTtkk~~~k~~i~EllW~l~G~tn~~~l~~~~~~i 79 (264)
|+||++|+++||++|+.++||||++|+|+||+++||||++| ||||||||+|||++++|+||||+|+||+++|+++||+|
T Consensus 9 e~qYl~ll~~IL~~G~~~~dRtG~~t~svfg~~~r~dl~~g~fPlLTtKkv~~k~~i~ElLWfl~G~t~~~~L~~~gv~i 88 (294)
T 3kgb_A 9 EHQYLDLVKHILENGARRMDRTGTGTLSVFGATMRFSLEDNTFPLLTTRRVFYRGVVEELLFFLRGETDSKVLEKKGVRI 88 (294)
T ss_dssp HHHHHHHHHHHHHHCEEEC----CCEEEEEEEEEEEECGGGBCCCCSSSCCCHHHHHHHHHHHHTTCCCTHHHHTTTCC-
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHCCCEE
T ss_conf 69999999999974987668999866998244469877889610586414207889999999974897355665148555
Q ss_pred HHHHHHH-----------HCCCCCCCCCHHHCC--------CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHH
Q ss_conf 3565421-----------001387662010003--------677532688999999999808852367775169888320
Q gi|254780956|r 80 WDEWADK-----------DGELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 (264)
Q Consensus 80 Wd~~a~~-----------~g~lg~~YG~qwR~~--------~~~~~~~~DQl~~vi~~Lk~np~sRR~i~~~wnp~~~~~ 140 (264)
||+|+++ +|++||+||+|||+| .+++++++|||++||++||+||+|||+|+++|||.++++
T Consensus 89 Wd~~~~~~~~~~~~~~~~~gdlG~~YG~qwr~~~~~y~~~~~~~~~~~~DQl~~vI~~Lk~~P~sRR~i~s~wnp~d~~~ 168 (294)
T 3kgb_A 89 WEKNGAKQFLQSVGIDREEGDLGPIYGFQWRHFGARYETSASSYEGKGVDQIASAIAAIRANPASRRIVVSAWNPTDLGS 168 (294)
T ss_dssp --------------------CCCSCHHHHHHSBTCCCCCTTSCCTTSSBCHHHHHHHHHHHCTTCSCCEEECCCTTCHHH
T ss_pred CCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCHHHHCC
T ss_conf 24435411466425677678454535388875033013455567898764999999987059423414887348999638
Q ss_pred CCCCCCCCCEEEEECCCEEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEHHHHHHHHHHH
Q ss_conf 24211354024667688059999726244022202167999999999997622421111352273021003689999983
Q gi|254780956|r 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 (264)
Q Consensus 141 ~~lpPC~~~~qf~v~~g~L~~~~~qRS~D~~lG~pfNi~~y~lL~~~iA~~~gl~~G~~~~~~~d~HIY~nH~~~vk~ql 220 (264)
|+|||||+.+||+|++|+|+|++||||||++||+||||++|++|++|||++||++||+|+|++||+|||+||+|++++||
T Consensus 169 ~~lpPC~~~~qf~v~~g~L~~~~~qRS~D~~lG~pfNi~~y~lL~~~iA~~~gl~~G~~~~~~gd~HIY~nh~~~v~~ql 248 (294)
T 3kgb_A 169 MALPPCHVLFQFNVTDGKLSCAMYQRSGDMGLGVPFNIASYSLLTILVAHLTGLQPGEFVHFLGDAHVYLDHVDSLRQQI 248 (294)
T ss_dssp HHSCCSEEEEEEEEETTEEEEEEEEEEEETTTHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEEEEEEGGGHHHHHHHT
T ss_pred CCCCCCCCEEEEEECCCEEEEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEEEHHHHHHHHHHH
T ss_conf 89999986279965796078878720236554355209999999999999719842058987345574074799999995
Q ss_pred CCCCCCCCEEEECCC--CCCCCCCCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 369876877996488--68711262033799768768887875569
Q gi|254780956|r 221 SRSPRTLPQMIINPN--IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 (264)
Q Consensus 221 ~R~p~~~P~L~i~~~--~~~i~d~~~eDf~L~~Y~~hp~Ik~~mAV 264 (264)
+|+|+++|+|+|+++ .++|++|++|||+|+||+|||+||||||-
T Consensus 249 ~R~p~~~P~l~i~~~~~~~~i~~~~~~Df~l~~Y~~hp~Ik~~maa 294 (294)
T 3kgb_A 249 QRPPRAFPKLFVSPKGPRTEPEHFQYEDFELVGYDPHPAIKMNMSA 294 (294)
T ss_dssp TSCCCCCCEEEECCSSCCCSGGGCCGGGEEEESCCCC---------
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCCEEHEEEECCCCCCCCCCCCCC
T ss_conf 7899999957978766767504455206799898899977846569