HHsearch results for GI: 254780956 and protein with PDBid: 3nrr_A
>3nrr_A Dihydrofolate reductase-thymidylate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, niaid, DHFR; HET: NAP D16 UMP; 1.80A {Babesia bovis} PDB: 3kjr_A* 3i3r_A* 3k2h_A*
Probab=100.00 E-value=0 Score=733.57 Aligned_cols=263 Identities=48% Similarity=0.918 Sum_probs=257.4
Q ss_pred HHHHHHHHHHHHCCCEECCCCCCCEEEEEECEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHH
Q ss_conf 57999999998639260379985347776120464423698104642022688999999985366646888640032135
Q gi|254780956|r 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD 81 (264)
Q Consensus 2 ~qYl~l~~~il~~G~~~~dRtG~~t~s~fg~~~~~dl~~gfPllTtkk~~~k~~i~EllW~l~G~tn~~~l~~~~~~iWd 81 (264)
.|||+|+++||++|+.++||||++|+|+||++|||||++|||||||||||||++++||||||||+||++.|.++++||||
T Consensus 233 ~qYl~l~~~Il~~G~~~~~RtG~~t~s~fg~~~r~dl~~gfPlLTtKk~~~k~i~~ELlWflsG~tn~~~L~~~~v~IWd 312 (515)
T 3nrr_A 233 FQYLDILADVLSHGVLKPNRTGTDAYSKFGYQMRFDLSRSFPLLTTKKVALRSIIEELLWFIKGSTNGNDLLAKNVRIWE 312 (515)
T ss_dssp HHHHHHHHHHHHHCEEECCTTSSCEEEEEEEEEEEETTTCCCCCSSSCCCHHHHHHHHHHHHTTCCBTHHHHTTTCCTTH
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCEECC
T ss_conf 99999999999726803589997069964705787545687640025321888999999998389627889855754267
Q ss_pred HHHHHH------------CCCCCCCCCHHHCCC--------CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHC
Q ss_conf 654210------------013876620100036--------775326889999999998088523677751698883202
Q gi|254780956|r 82 EWADKD------------GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 (264)
Q Consensus 82 ~~a~~~------------g~lg~~YG~qwR~~~--------~~~~~~~DQl~~vi~~Lk~np~sRR~i~~~wnp~~~~~~ 141 (264)
+|++++ |++|++||+|||+|+ +|.++++|||++||++||+||+|||+|+++|||+++++|
T Consensus 313 ~~~~~~~~~~~g~~~~~~gdlG~iYG~qwr~~g~~~~~~~~~~~~~~~DQl~~vi~~Lk~nP~sRR~ii~~wnp~~~~~~ 392 (515)
T 3nrr_A 313 LNGRRDFLDKNGFTDREEHDLGPIYGFQWRHFGAEYLDMHADYTGKGIDQLAEIINRIKTNPNDRRLIVCSWNVSDLKKM 392 (515)
T ss_dssp HHHSHHHHHHTTCTTSCTTBCCSCHHHHHHHBTCCCCCTTSCCTTCSBCHHHHHHHHHHHCTTCSCCEEECCCGGGGGGS
T ss_pred CCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHCC
T ss_conf 76551347633754234464676341055424863556632578876668999999986597212321232668887277
Q ss_pred CCCCCCCCEEEEECCCEEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEHHHHHHHHHHHC
Q ss_conf 42113540246676880599997262440222021679999999999976224211113522730210036899999833
Q gi|254780956|r 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 (264)
Q Consensus 142 ~lpPC~~~~qf~v~~g~L~~~~~qRS~D~~lG~pfNi~~y~lL~~~iA~~~gl~~G~~~~~~~d~HIY~nH~~~vk~ql~ 221 (264)
+|||||..+||+|++|+|+|++||||+|++||+|||||+|++|++|||++||++||+|+|++||+|||+||+|++++||+
T Consensus 393 ~l~PC~~~~qf~v~~~~L~~~~~qRS~D~~lG~pfNi~~yalL~~~iA~~~gl~~G~~~~~~gd~HIY~~h~~~v~~ql~ 472 (515)
T 3nrr_A 393 ALPPCHCFFQFYVSDNKLSCMMHQRSCDLGLGVPFNIASYSILTAMVAQVCGLGLGEFVHNLADAHIYVDHVDAVTTQIA 472 (515)
T ss_dssp SSCCSEEEEEEEEETTEEEEEEEEEEEETTTHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEEEEEEGGGHHHHHHHHT
T ss_pred CCCCCCEEEEEEEECCEEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECHHHHHHHHHHHC
T ss_conf 88522158999995778899999520122125757899999999999998498054699994678970868999999867
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 6987687799648868711262033799768768887875569
Q gi|254780956|r 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 (264)
Q Consensus 222 R~p~~~P~L~i~~~~~~i~d~~~eDf~L~~Y~~hp~Ik~~mAV 264 (264)
|+|+++|+|+|++++++|+||++|||+|+||+|||+||||||-
T Consensus 473 R~p~~~P~l~i~~~~~~i~d~~~~Df~l~~Y~~hp~I~~~~a~ 515 (515)
T 3nrr_A 473 RIPHPFPRLRLNPDIRNIEDFTIDDIVVEDYVSHPPIPMAMSA 515 (515)
T ss_dssp SCCCCCCEEEECTTCCSGGGCCGGGEEEESCCCCCCCCCCCCC
T ss_pred CCCCCCCEEEECCCCCCHHCCCHHHEEEECCCCCCCCCCCCCC
T ss_conf 7998998369789988540388417799688789985723359