RPSBLAST alignment of GI: 254780956 and protein with PDBid: 1hw4

>1hw4_A TS, thymidylate synthase; methyltransferase; HET: CME; 2.06A {Homo sapiens} SCOP: d.117.1.1 Length = 355
 Score =  357 bits (917), Expect = 2e-99
 Identities = 130/283 (45%), Positives = 176/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLW
Sbjct: 73  LQYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLW 132

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------- 102
           F++G +N   L   GV IWD    +            +G+LGP+YG QWR +        
Sbjct: 133 FIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDME 192

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSC
Sbjct: 193 SDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSC 252

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL 
Sbjct: 253 QLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQ 312

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 313 REPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 355