HHSEARCH alignment of GI: 254780957 and SCOP domain: d1j3ka_

Alignment
>d1j3ka_ c.71.1.1 (A:) Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, DFR domain {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00  E-value=0  Score=338.51  Aligned_cols=163  Identities=31%  Similarity=0.531  Sum_probs=145.4

Q ss_pred             EEEEEEECC-----------------CCEEEECCCCCCC-CHHHHHHHHHHH----------------------------
Q ss_conf             999999717-----------------9768562676877-889999999970----------------------------
Q gi|254780957|r    6 IILIAAITR-----------------NNVIGSCGGMPWK-ISSDLKRFKSLT----------------------------   39 (176)
Q Consensus         6 i~~I~A~~~-----------------n~~IG~~~~lPW~-~~~Dl~~Fk~~T----------------------------   39 (176)
                      |-.|+|+++                 ++|||++|+|||| +|+||+|||++|                            
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GIG~~g~LPW~~i~~Dlk~Fk~~Tt~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (231)
T d1j3ka_          11 IYAICACCKVESKNEGKKNEVFNNYTFRGLGNKGVLPWKCISLDMKYFRAVTTYVNESKYEKLKYKRCKYLNKETVDNVN   90 (231)
T ss_dssp             EEEEEEEEEECCCSSCGGGCCCCGGGEEEEEBTTBCSSSCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTCCC-----
T ss_pred             HHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             22267775235788653002124666666677994889888799999998646788765343334322212212333333


Q ss_pred             -------CCCEEEEEECCCCCCC---CCCCCCEEEEEEECCCCCCCCCCCEEEECCHHHHHHHHCCCCCCEEEEECHHHH
Q ss_conf             -------8987999711113434---566896389992147743456898599901889887632379845999710889
Q gi|254780957|r   40 -------TGNPVVMGYRTFQSIG---RLLPGRTNIIITRDNTRRASVNPEAVLASSILDSLDLASKTGSKKIFIIGGGEI  109 (176)
Q Consensus        40 -------~~~~vimGrkT~~sl~---~pLp~R~niVlTr~~~~~~~~~~~~~~~~s~~~al~~~~~~~~~~i~IIGG~~I  109 (176)
                             +|++||||||||+|||   +|||+|.||||||+.... ...+++.++.|+++|++.+++.+.++||||||++|
T Consensus        91 ~~~~~~~~~n~VIMGRkT~eSlp~~~rPLp~R~nIVLSr~~~~~-~~~~~v~v~~sl~~ai~~~~~~~~~~IfIIGG~~I  169 (231)
T d1j3ka_          91 DMPNSKKLQNVVVMGRTNWESIPKKFKPLSNRINVILSRTLKKE-DFDEDVYIINKVEDLIVLLGKLNYYKCFILGGSVV  169 (231)
T ss_dssp             -----CCCCCEEEEEHHHHHHSCGGGCSCTTSEEEEECSSCCGG-GCCSSCEEESSHHHHHHHHHHSCCSCEEECCCHHH
T ss_pred             CCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCEEEEECCCCCC-CCCCCEEEEHHHHHHHHHHHHCCCCCEEEECHHHH
T ss_conf             44442246977999651066576001446897169983575444-46776188401999999975147773699776899


Q ss_pred             HHHHH--HHCCEEEEEEECCCCCCCEECCCCCHHHEEEEEEEEEECCCCCCCCCEEEEEEEEECC
Q ss_conf             98742--0058999987738627847665789556089856651026888887369999998012
Q gi|254780957|r  110 YAQTI--SLAHTLYITHIEKEIEGDVFFPSIDSNIWKKQEKEIITSAGEGDDYPTRFVIYDRFLS  172 (176)
Q Consensus       110 Y~~~l--~~~d~l~iT~I~~~~egD~~fP~id~~~~~~~~~~~~~~~~e~n~~~y~f~~y~R~~~  172 (176)
                      |+++|  ++||+||||+|+.+|+||+|||++|.+.|+++++....   +++++.|+|++|+|+.+
T Consensus       170 Y~~~L~~~~id~iylT~I~~~~e~DtfFP~id~~~f~~~~~~~~~---~e~~~~y~F~~Y~rknn  231 (231)
T d1j3ka_         170 YQEFLEKKLIKKIYFTRINSTYECDVFFPEINENEYQIISVSDVY---TSNNTTLDFIIYKKTNN  231 (231)
T ss_dssp             HHHHHHTTCCSEEEEEEEEEEECCSEECCCCCTTTEEEEEECCCE---EETTEEEEEEEEEECCC
T ss_pred             HHHHHHHHCCCEEEEEEECCCCCCCEECCCCCHHHCEEEEEEECC---CCCCCEEEEEEEEECCC
T ss_conf             999987603788999876564068777787886889999865000---37997048999997379


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Dihydrofolate reductase-like
superfamily: Dihydrofolate reductase-like
family: Dihydrofolate reductases
domain: Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, DFR domain
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]