HHSEARCH alignment of GI: 254780957 and SCOP domain: d2b3za1

Alignment
>d2b3za1 c.71.1.2 (A:146-359) Riboflavin biosynthesis protein RibD {Bacillus subtilis [TaxId: 1423]}
Probab=98.33  E-value=4.6e-06  Score=53.16  Aligned_cols=127  Identities=17%  Similarity=0.280  Sum_probs=85.3

Q ss_pred             CCEEEEEEECCCCEEE-ECCCCCC-CCHHHHHHHHHHH-CCCEEEEEECCCCC----CC----CCCCCCEEEEEEECCCC
Q ss_conf             7199999971797685-6267687-7889999999970-89879997111134----34----56689638999214774
Q gi|254780957|r    4 PEIILIAAITRNNVIG-SCGGMPW-KISSDLKRFKSLT-TGNPVVMGYRTFQS----IG----RLLPGRTNIIITRDNTR   72 (176)
Q Consensus         4 ~~i~~I~A~~~n~~IG-~~~~lPW-~~~~Dl~~Fk~~T-~~~~vimGrkT~~s----l~----~pLp~R~niVlTr~~~~   72 (176)
                      |-|.+-.|++.||-|+ .+|.--| .-+++.+++.++- ...+++.|.+|...    +.    ..-..-.-+|++++...
T Consensus         1 P~V~~k~A~SlDG~Ia~~~g~s~wit~~~sr~~~h~lR~~~dailvG~~Tv~~D~p~l~~R~~~~~~~p~~vv~d~~l~~   80 (214)
T d2b3za1           1 PYVTLKAAASLDGKIATSTGDSKWITSEAARQDAQQYRKTHQSILVGVGTVKADNPSLTCRLPNVTKQPVRVILDTVLSI   80 (214)
T ss_dssp             CEEEEEEEEETTSBSSCTTSCCTTSSCHHHHHHHTTHHHHSSEEEEEHHHHHHHCCCCCCCSTTCCSCCEEEEECTTCCC
T ss_pred             CEEEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             97999998879788788899667889989999999999861211233053101320000246543233302111334553


Q ss_pred             CC-------CCCC--------------------CEEEE------CCHHHHHHHHCCCCCCEEEEECHHHHHHHHHH--HC
Q ss_conf             34-------5689--------------------85999------01889887632379845999710889987420--05
Q gi|254780957|r   73 RA-------SVNP--------------------EAVLA------SSILDSLDLASKTGSKKIFIIGGGEIYAQTIS--LA  117 (176)
Q Consensus        73 ~~-------~~~~--------------------~~~~~------~s~~~al~~~~~~~~~~i~IIGG~~IY~~~l~--~~  117 (176)
                      ..       ...+                    ++.++      .++.++++.+.+.+.+.|+|-||+.+..+||.  ++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~L~~~gi~~ilvEGG~~l~~sfl~~~Lv  160 (214)
T d2b3za1          81 PEDAKVICDQIAPTWIFTTARADEEKKKRLSAFGVNIFTLETERIQIPDVLKILAEEGIMSVYVEGGSAVHGSFVKEGCF  160 (214)
T ss_dssp             CTTCHHHHSCSSCEEEEECTTSCHHHHHHHHTTTCEEEECSSSSCCHHHHHHHHHHTTCCEEEEEECHHHHHHHHHHTCC
T ss_pred             CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCH
T ss_conf             52112787403564111111123445555530365421121112123899999987799779997267888999855742


Q ss_pred             CEEEEEEECCCCC
Q ss_conf             8999987738627
Q gi|254780957|r  118 HTLYITHIEKEIE  130 (176)
Q Consensus       118 d~l~iT~I~~~~e  130 (176)
                      ||++++.-..-..
T Consensus       161 DEl~l~iaP~ilG  173 (214)
T d2b3za1         161 QEIIFYFAPKLIG  173 (214)
T ss_dssp             SEEEEEEESBCCC
T ss_pred             HEEEEEECCEEEC
T ss_conf             1365688775655


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Dihydrofolate reductase-like
superfamily: Dihydrofolate reductase-like
family: RibD C-terminal domain-like
domain: Riboflavin biosynthesis protein RibD
species: Bacillus subtilis [TaxId: 1423]