HHSEARCH alignment of GI: 254780957 and SCOP domain: d2hxva1

Alignment
>d2hxva1 c.71.1.2 (A:148-345) Riboflavin biosynthesis protein RibD {Thermotoga maritima [TaxId: 2336]}
Probab=98.87  E-value=3.8e-08  Score=65.30  Aligned_cols=145  Identities=16%  Similarity=0.227  Sum_probs=90.7

Q ss_pred             CCEEEEEEECCCCEEE-ECCCCCCCC---HHHHHHHHHHHCCCEEEEEECCCCC----CC-C--CCCCCEEEEEEECCCC
Q ss_conf             7199999971797685-626768778---8999999997089879997111134----34-5--6689638999214774
Q gi|254780957|r    4 PEIILIAAITRNNVIG-SCGGMPWKI---SSDLKRFKSLTTGNPVVMGYRTFQS----IG-R--LLPGRTNIIITRDNTR   72 (176)
Q Consensus         4 ~~i~~I~A~~~n~~IG-~~~~lPW~~---~~Dl~~Fk~~T~~~~vimGrkT~~s----l~-~--pLp~R~niVlTr~~~~   72 (176)
                      |-|.+-+|++.+|-|+ .+|+.-|--   ..+.+..|+  ...+|+||++|...    +. |  ...+=..+|++++...
T Consensus         1 P~V~lk~A~SlDG~ia~~~g~~~wit~~~~~~~h~lRa--~~DaIlvG~~Tv~~D~p~L~~R~~~~~~P~rvVld~~~~l   78 (198)
T d2hxva1           1 PFVALKYASTLDGKIADHRGDSKWITDKLRFKVHEMRN--IYSAVLVGAGTVLKDNPQLTCRLKEGRNPVRVILDRKGVL   78 (198)
T ss_dssp             CEEEEEEEEETTSEEECTTSCCTTSCSTTHHHHHHHHH--HSSEEEEEHHHHHHHCCCCCCCSTTSCCCEEEEECTTCTT
T ss_pred             CEEEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHH--HCCHHHHCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCC
T ss_conf             97999999969889678999877688489999999997--3551232346330125325431468876436986667779


Q ss_pred             CC------CCCCCEEEE------------------CCHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCEEEEEEECCC
Q ss_conf             34------568985999------------------018898876323798459997108899874200589999877386
Q gi|254780957|r   73 RA------SVNPEAVLA------------------SSILDSLDLASKTGSKKIFIIGGGEIYAQTISLAHTLYITHIEKE  128 (176)
Q Consensus        73 ~~------~~~~~~~~~------------------~s~~~al~~~~~~~~~~i~IIGG~~IY~~~l~~~d~l~iT~I~~~  128 (176)
                      ..      ...+...++                  .++.++++.+.+.+.+.|+|-||+.+..+|++..|++++|.-..-
T Consensus        79 ~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~l~~il~~L~~~gi~~ilvEGG~~l~~sfl~~~De~~~~iaP~i  158 (198)
T d2hxva1          79 SGKVFRVFEENARVIVFTESEEAEYPPHVEKALSDCSVESILRNLYERDIDSVLVEGGSKVFSEFLDHADVVFGFYSTKI  158 (198)
T ss_dssp             TTCCCGGGSSSSCEEEEESCSSCCCCTTSEEEECCCCHHHHHHHHHHTTCCEEEECCCHHHHHHHGGGCSEEEEEEESCC
T ss_pred             CHHHHHHCCCCCCEEEEECCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCEEEEEECCHH
T ss_conf             87787641589728999646321120121013345899999999987799789873389999999974859999985332


Q ss_pred             CCCC-EECC----CCC-HHHEEEEEEEE
Q ss_conf             2784-7665----789-55608985665
Q gi|254780957|r  129 IEGD-VFFP----SID-SNIWKKQEKEI  150 (176)
Q Consensus       129 ~egD-~~fP----~id-~~~~~~~~~~~  150 (176)
                      .... ..|+    .+. ...|++.+.+.
T Consensus       159 lG~g~~~~~~~~~~~~~~~~l~l~~~~~  186 (198)
T d2hxva1         159 FGKGLDVFSGYLSDVSVPPKFKVVNVEF  186 (198)
T ss_dssp             CSSSEETTTTCCCCTTSCCCEEEEEEEE
T ss_pred             HCCCCCCCCCCHHHHHHCCCCEEEEEEE
T ss_conf             0688411255211023253767877899


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Dihydrofolate reductase-like
superfamily: Dihydrofolate reductase-like
family: RibD C-terminal domain-like
domain: Riboflavin biosynthesis protein RibD
species: Thermotoga maritima [TaxId: 2336]