HHSEARCH alignment of GI: 254780957 and SCOP domain: d3dfra_

Alignment
>d3dfra_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Lactobacillus casei [TaxId: 1582]}
Probab=100.00  E-value=0  Score=357.08  Aligned_cols=159  Identities=25%  Similarity=0.473  Sum_probs=147.7

Q ss_pred             EEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCC-CCCCCCEEEEEEECCCCCCCCCCCEEEECC
Q ss_conf             9999971797685626768778899999999708987999711113434-566896389992147743456898599901
Q gi|254780957|r    7 ILIAAITRNNVIGSCGGMPWKISSDLKRFKSLTTGNPVVMGYRTFQSIG-RLLPGRTNIIITRDNTRRASVNPEAVLASS   85 (176)
Q Consensus         7 ~~I~A~~~n~~IG~~~~lPW~~~~Dl~~Fk~~T~~~~vimGrkT~~sl~-~pLp~R~niVlTr~~~~~~~~~~~~~~~~s   85 (176)
                      +||||+++||+||++|+||||+|+||+|||++|+|++||||||||+||| +|||+|.||||||++.+..   +++.++.|
T Consensus         2 slI~A~~~ng~IG~~~~lpW~~~~Dl~~F~~~T~~~~vIMGrkT~eslp~~pl~~R~~iVls~~~~~~~---~~~~~~~s   78 (162)
T d3dfra_           2 AFLWAQNRNGLIGKDGHLPWHLPDDLHYFRAQTVGKIMVVGRRTYESFPKRPLPERTNVVLTHQEDYQA---QGAVVVHD   78 (162)
T ss_dssp             EEEEEECTTCEEEBTTBCSSCCHHHHHHHHHTTTTSEEEEEHHHHHHSSSSSCTTSEEEEECSCTTCCC---TTSEEESS
T ss_pred             CEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCEEEEECCCCCCCC---CCCEECCH
T ss_conf             289999899946479976776999999999972798189943021210343547724799515543223---67240102


Q ss_pred             HHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCEEEEEEECCCCCCCEECCCCCHHHEEEEEEEEEECCCCCCCCCEEEE
Q ss_conf             88988763237984599971088998742005899998773862784766578955608985665102688888736999
Q gi|254780957|r   86 ILDSLDLASKTGSKKIFIIGGGEIYAQTISLAHTLYITHIEKEIEGDVFFPSIDSNIWKKQEKEIITSAGEGDDYPTRFV  165 (176)
Q Consensus        86 ~~~al~~~~~~~~~~i~IIGG~~IY~~~l~~~d~l~iT~I~~~~egD~~fP~id~~~~~~~~~~~~~~~~e~n~~~y~f~  165 (176)
                      ++++++.+++...++||||||++||++++++||++|+|+|+.+|+||++||+++++.|+++.++...  ++++++.|+|+
T Consensus        79 ~~~~i~~~~~~~~~~i~IiGG~~Iy~~~l~~~d~i~lT~I~~~~~~D~~fp~~~~~~~~~v~~~~~~--~~~~~i~y~f~  156 (162)
T d3dfra_          79 VAAVFAYAKQHLDQELVIAGGAQIFTAFKDDVDTLLVTRLAGSFEGDTKMIPLNWDDFTKVSSRTVE--DTNPALTHTYE  156 (162)
T ss_dssp             HHHHHHHHHHCCSSCEEECCCHHHHHHTGGGCCEEEEEEESSCCCCSEECCCCCGGGEEEEEEEEEC--CSSGGGCEEEE
T ss_pred             HHHHHHHHHHCCCCCEEECCHHHHHHHHHHHCCEEEEEEECCCCCCCEECCCCCHHHCEEEEEEEEC--CCCCCCCEEEE
T ss_conf             8899998753254202342367899987754799999986773168867687885797999988732--56799737999


Q ss_pred             EEEEE
Q ss_conf             99980
Q gi|254780957|r  166 IYDRF  170 (176)
Q Consensus       166 ~y~R~  170 (176)
                      +|+|+
T Consensus       157 ~y~Rk  161 (162)
T d3dfra_         157 VWQKK  161 (162)
T ss_dssp             EEEEC
T ss_pred             EEEEE
T ss_conf             99971


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Dihydrofolate reductase-like
superfamily: Dihydrofolate reductase-like
family: Dihydrofolate reductases
domain: Dihydrofolate reductase, prokaryotic type
species: Lactobacillus casei [TaxId: 1582]