HHsearch alignment of GI: 254780958 and MMDB domain: 2rpb_A_
>2rpb_A (A:) Hypothetical membrane protein; SPFH domain; NMR {Pyrococcus horikoshii}
Probab=99.72 E-value=8.1e-18 Score=137.40 Aligned_cols=112 Identities=20% Similarity=0.375 Sum_probs=103.8
Q ss_pred EEEEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 68722048999826722114766503660684188763443422158878532012989999888777677775301000
Q gi|254780958|r 105 VEIVKVIERQQKIGGRSASVGSNSGLILTGDQNIVGLHFSVLYVVTDPRLYLFNLENPGETLKQVSESAMREVVGRRFAV 184 (355)
Q Consensus 105 v~~v~v~~~~~~~~~~~~~~~~~~~~mLT~D~n~V~v~~~V~yrI~Dp~~~~~~v~~~~~~l~~~~esalR~vvg~~~~d 184 (355)
|.+++++.+.+++....+ +|+|++.+.++++++|||.||..|+|++.+++..|+..+++++|+++|+++++
T Consensus 2 v~~vd~r~~~~~~~~~~v---------~T~D~~~v~v~~~v~yrI~d~~~~~~~~~~~~~~l~~~~~~alr~~~~~~~~~ 72 (113)
T 2rpb_A 2 SDHVDLREHVIDVPPQEV---------ICKDNVVVTVDAVVYYQVIDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELD 72 (113)
T ss_dssp CSCCCCCCEEEECCCEEE---------ECTTSCEEEECEEEEEEESCTTTCTTTTTHHHHHHHHHHHHHHHHHHTSCCTT
T ss_pred CCCEEEEEEEECCCCCEE---------ECCCCCEEEEEEEEEEEECCHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 961752688225898576---------83899999998999999887688721279999999999999999998655399
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHH
Q ss_conf 00155467887779999888631234617987534301562578
Q gi|254780958|r 185 DIFRSQRQQIALEVRNLIQKTMDYYKSGILINTISIEDASPPRE 228 (355)
Q Consensus 185 ~ilt~~R~~i~~~v~~~lq~~l~~y~~GI~V~~V~i~~v~~P~~ 228 (355)
++++ +|++++.++++.+++.++.| ||+|++|+|++++||++
T Consensus 73 el~~-~R~~i~~~i~~~l~~~l~~~--Gi~i~~v~I~~i~~p~e 113 (113)
T 2rpb_A 73 ETLS-GRDIINARLREELDKITDRW--GVKITRVEIQRIDPPKD 113 (113)
T ss_dssp HHHH-CHHHHHHHHHHHHHHHHGGG--TEECCCEEECCCBCCCC
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHCC--CEEEEEEEEEEEECCCC
T ss_conf 9982-59999999999898776026--98999999985219589