HHsearch alignment for GI: 254780959 and conserved domain: PRK10930
>PRK10930 FtsH protease regulator HflK; Provisional.
Probab=100.00 E-value=0 Score=381.33 Aligned_cols=281 Identities=20% Similarity=0.254 Sum_probs=240.5
Q ss_pred HHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCEEEEEECCCCEEEEECCCCCCEEEEEEEEEEECCCCCCCCHHCCCC
Q ss_conf 68999999999999983007957875799997585765522897189807632200379998752013443310000112
Q gi|254780959|r 6 CISFFLFIFLLLGLSFSSFFIVDARQQAIVTRFGKIHATYREPGIYFKMPFSFMNVDRVKYLQKQIMRLNLDNIRVQVSD 85 (302)
Q Consensus 6 ~i~~~v~i~~~~~~~~~~~~~V~~~e~~Vv~rfGk~~~~~~~pGlhfk~P~~~~~i~~v~~~~~r~~~~~~~~~~v~T~D 85 (302)
T Consensus 80 ~i~i-v~~~lv~~Wl~sGfY~V~~~E~gVVlRFGky~~t~-~PGLhw~-p~pIe~V~~VnV~~vR--~~~~-~~lMLT~D 153 (419)
T PRK10930 80 VVTI-AAAAVVIIWAASGFYTIKEAERGVVTRFGKFSHLV-EPGLNWK-PTFIDEVKPVNVEAVR--ELAA-SGVMLTSD 153 (419)
T ss_pred HHHH-HHHHHHHHHHHCEEEEECCCCEEEEEECCCCCCCC-CCCCCCC-CCCCCEEEEECCEECC--CCCC-CCCEEECC
T ss_conf 8999-99999999998225997765137878614511020-8987753-6775549984452102--4565-66025078
Q ss_pred CCCCCCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC--
Q ss_conf 221012433210120110122201331334664346777876531011242000001210015899999998874221--
Q gi|254780959|r 86 GKFYEVDAMMTYRIIDPSLFCQSVSCDRIAAESRLRTRLDASIRRVYGLRRFDDALSKQREKMMMEVCEDLRYDAEKL-- 163 (302)
Q Consensus 86 ~~~v~vd~~v~yrI~dp~~~~~~~~~~~~~~~~~l~~~~~~~lr~v~~~~~~~e~l~~~R~~i~~~v~~~l~~~~~~~-- 163 (302)
T Consensus 154 eNIVdV~~~VQYrI~dp~~yLFnv~d----Pe~tlr~aaESAmReVVG~~~~d~vLT~gR~~Ia~~v~~~lQ~~Ld~Y~~ 229 (419)
T PRK10930 154 ENVVRVEMNVQYRVTDPEKYLFSVTS----PDDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQRELEETIRPYDM 229 (419)
T ss_pred CCEEEEEEEEEEEECCHHHHEEECCC----HHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 87698778999995685781364578----76899999999999997636489996488899999999999999985089
Q ss_pred CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 44310000001111012445543112899999887767889999765577889999976898999988863387899999
Q gi|254780959|r 164 GISIEDVRVLRTDLTQEVSQQTYDRMKAERLAEAEFIRARGREEGQKRMSIADRKATQILSEARRDSEINYGKGEAERGR 243 (302)
Q Consensus 164 GI~I~~V~I~~i~~p~~i~~ai~~~~~ae~~~~A~~~~a~~~~ea~~~~a~ae~~~~~i~AeA~~~a~~~~A~aeA~a~~ 243 (302)
T Consensus 230 GI~I~~V~lq~a~PP~~V~~AF~DV~~ArqD~er~ineA~aYaN~iiP~ArG~A~rii~eAeaYk~~vV~~A~Gea~RF~ 309 (419)
T PRK10930 230 GITLLDVNFQAARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKAQTILEAQGEVARFA 309 (419)
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 97899988467899888999999999999889999999999997535132138999999999999999996453599999
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHCC--CHHHCCCC
Q ss_conf 9999987579999999999999998346993999889971655122--10100121
Q gi|254780959|r 244 ILSNVFQKDPEFFEFYRSMRAYTDSLASSDTFLVLSPDSDFFKYFD--RFQERQKN 297 (302)
Q Consensus 244 ~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~~~i~~~~s~~~~~l~--~~~~~~~~ 297 (302)
T Consensus 310 ~ll~eY~kAP~VTR~RLYLEtme~Vls~~~KVivD-~~g~n~~yLPLDkl~~~~~~ 364 (419)
T PRK10930 310 KLLPEYKAAPEITRERLYIETMEKVLGNTRKVLVN-DKGGNLMVLPLDQMLKGGNA 364 (419)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEE-CCCCCEEECCHHHHHHCCCC
T ss_conf 99999986869999999999999997369879997-79980475337999746788