>cd03403 Band_7_stomatin_like Band_7_stomatin_like: A subgroup of the band 7 domain of flotillin (reggie) like proteins similar to stomatin and podicin (two lipid raft-associated integral membrane proteins). Individual proteins of this band 7 domain family may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Stomatin is widely expressed and, highly expressed in red blood cells. It localizes predominantly to the plasma membrane and to intracellular vesicles of the endocytic pathway, where it is present in higher order homo-oligomeric complexes (of between 9 and 12 monomers). Stomatin interacts with and regulates members of the degenerin/epithelia Na+ channel family in mechanosensory cells of Caenorhabditis elegans and vertebrate neurons and, is implicated in trafficking of Glut1 glucose transporters. Prohibitin is a mitochondrial inner-membrane protein hypothesized to act as a chaperone for the stabilization of mitochondrial proteins. Podicin local

Probab=100.00 E-value=1.4e-35 Score=289.94 Aligned_cols=214 Identities=25% Similarity=0.408 Sum_probs=182.9 Q ss_pred ECCCCEEEEEECCEEEEEECCCCEEEEECCCCCCEEEE-EEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCEEEECCCHH Q ss_conf 57875799997585765522897189807632200379-99875201344331000011222101243321012011012 Q gi|254780959|r 27 VDARQQAIVTRFGKIHATYREPGIYFKMPFSFMNVDRV-KYLQKQIMRLNLDNIRVQVSDGKFYEVDAMMTYRIIDPSLF 105 (302) Q Consensus 27 V~~~e~~Vv~rfGk~~~~~~~pGlhfk~P~~~~~i~~v-~~~~~r~~~~~~~~~~v~T~D~~~v~vd~~v~yrI~dp~~~ 105 (302) T Consensus 1 V~e~e~gVv~~fGk~~~v~-~pGlh~~~P~----i~~v~~~vd~r~~~~~~~~~~~lT~D~~~v~v~~~v~yrI~dp~~~ 75 (215) T cd03403 1 VPQYERGVVERLGKYHRTL-GPGLHFIIPF----IDRIAYKVDLREQVLDVPPQEVITKDNVTVRVDAVLYYRVVDPVKA 75 (215) T ss_pred CCCCEEEEEEECCCCCCEE-CCCEEEEECC----CEEEEEEEEEEEEEEECCCCEEECCCCCEEEEEEEEEEEECCHHHH T ss_conf 9987089999889799577-8964799377----5189999730699760787344627997899999999995788999 Q ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHH Q ss_conf 22013313346643467778765310112420000012100158999999988742214431000000111101244554 Q gi|254780959|r 106 CQSVSCDRIAAESRLRTRLDASIRRVYGLRRFDDALSKQREKMMMEVCEDLRYDAEKLGISIEDVRVLRTDLTQEVSQQT 185 (302) Q Consensus 106 ~~~~~~~~~~~~~~l~~~~~~~lr~v~~~~~~~e~l~~~R~~i~~~v~~~l~~~~~~~GI~I~~V~I~~i~~p~~i~~ai 185 (302) T Consensus 76 ~~~v~~----~~~~l~~~~~~~lR~~i~~~~~~~i~~-~R~~i~~~i~~~l~~~l~~~Gi~v~~v~i~~i~~P~~v~~ai 150 (215) T cd03403 76 VYGVED----YRYAISQLAQTTLRSVIGKMELDELLS-EREEINAELVEILDEATDPWGVKVERVEIKDIILPQEIQEAM 150 (215) T ss_pred HHHCCC----HHHHHHHHHHHHHHHHHCCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHH T ss_conf 973289----999999999999998853233899985-499999999999998721288599999997538999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH Q ss_conf 31128999998877678899997655778899999768989999888633878999999999987579999999999999 Q gi|254780959|r 186 YDRMKAERLAEAEFIRARGREEGQKRMSIADRKATQILSEARRDSEINYGKGEAERGRILSNVFQKDPEFFEFYRSMRAY 265 (302) Q Consensus 186 ~~~~~ae~~~~A~~~~a~~~~ea~~~~a~ae~~~~~i~AeA~~~a~~~~A~aeA~a~~~~~~a~~~~p~~~~~~~~l~~~ 265 (302) T Consensus 151 ~~~~~Aer~~~a~i~~Aege~~a~~~~aea-----------~~~~~~-------------------~~~~~~-~k~lea~ 199 (215) T cd03403 151 AKQAEAEREKRAKIIEAEGERQAAILLAEA-----------AKQAAI-------------------NPAALQ-LRELETL 199 (215) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHH-------------------CHHHHH-HHHHHHH T ss_conf 999999999987899949999999999999-----------999603-------------------989999-9999999 Q ss_pred HHHHCCCCCEEEECCC Q ss_conf 9983469939998899 Q gi|254780959|r 266 TDSLASSDTFLVLSPD 281 (302) Q Consensus 266 ~~~~~~~~~~~i~~~~ 281 (302) T Consensus 200 ~~~a~~~~~~~i~~~~ 215 (215) T cd03403 200 EEIAKEAASTVVFPAP 215 (215) T ss_pred HHHHHCCCCEEEEECC T ss_conf 9998389977998387

HHsearch alignment for GI: 254780959 and conserved domain: cd03403