HHsearch alignment for GI: 254780959 and conserved domain: smart00244
>smart00244 PHB prohibitin homologues. prohibitin homologues
Probab=99.95 E-value=1.6e-27 Score=228.65 Aligned_cols=159 Identities=26% Similarity=0.425 Sum_probs=148.1
Q ss_pred HHEEEECCCCEEEEEECCEEEEEECCCCEEEEECCCCCCEEEEEEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCEEEEC
Q ss_conf 30079578757999975857655228971898076322003799987520134433100001122210124332101201
Q gi|254780959|r 22 SSFFIVDARQQAIVTRFGKIHATYREPGIYFKMPFSFMNVDRVKYLQKQIMRLNLDNIRVQVSDGKFYEVDAMMTYRIID 101 (302)
Q Consensus 22 ~~~~~V~~~e~~Vv~rfGk~~~~~~~pGlhfk~P~~~~~i~~v~~~~~r~~~~~~~~~~v~T~D~~~v~vd~~v~yrI~d 101 (302)
T Consensus 1 s~~~~V~~~e~~Vi~~fG~~~~~-~~pGlh~~~P~----~~~~~~~~~r~~~~~~~~~~~~T~D~~~v~v~~~v~yri~d 75 (160)
T smart00244 1 AAIKVVGEGEAGVVERLGRVLRV-LGPGLHFLIPF----IDRVKKVDLRAQTDDVPPQEIITKDNVKVSVDAVVYYRVLD 75 (160)
T ss_pred CCEEEECCCEEEEEEECCCEEEE-ECCCEEEECCC----CCEEEEEEEEEEEEECCCEEEECCCCCEEEEEEEEEEEECC
T ss_conf 97899888739999997958108-88916898173----42589994146875058668373899899999999999878
Q ss_pred CCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHH
Q ss_conf 10122201331334664346777876531011242000001210015899999998874221443100000011110124
Q gi|254780959|r 102 PSLFCQSVSCDRIAAESRLRTRLDASIRRVYGLRRFDDALSKQREKMMMEVCEDLRYDAEKLGISIEDVRVLRTDLTQEV 181 (302)
Q Consensus 102 p~~~~~~~~~~~~~~~~~l~~~~~~~lr~v~~~~~~~e~l~~~R~~i~~~v~~~l~~~~~~~GI~I~~V~I~~i~~p~~i 181 (302)
T Consensus 76 ~~~~~~~~~~~~---~~~i~~~v~~~~R~vi~~~~~~~~~~~~r~~i~~~i~~~l~~~~~~~Gi~i~~v~i~~i~~p~~i 152 (160)
T smart00244 76 PLKAVYRVLDAD---YAVIEQLAQTTLRSVIGKMTLDELLTDEREKISENIREELNERAEAWGIEVEDVEIKDIRLPEEI 152 (160)
T ss_pred HHHHHHHCCCHH---HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCHHH
T ss_conf 799772068988---99999999999999963773899844408888999999999988748979999999855899999
Q ss_pred HHHHHHH
Q ss_conf 4554311
Q gi|254780959|r 182 SQQTYDR 188 (302)
Q Consensus 182 ~~ai~~~ 188 (302)
T Consensus 153 ~~ai~~k 159 (160)
T smart00244 153 QEAMEQQ 159 (160)
T ss_pred HHHHHHH
T ss_conf 9999851