HHsearch alignment of GI: 254780959 and MMDB domain: 3bk6_A_1-114
>3bk6_A (A:1-114) PH stomatin; archaea, trimer, coiled- coil, flotillin, SPFH, membrane fusion, trafficking, transmembrane, membrane protein; 3.20A {Pyrococcus horikoshii}
Probab=99.49 E-value=8.9e-15 Score=131.27 Aligned_cols=112 Identities=19% Similarity=0.290 Sum_probs=105.1
Q ss_pred EEEEEEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 03799987520134433100001122210124332101201101222013313346643467778765310112420000
Q gi|254780959|r 61 VDRVKYLQKQIMRLNLDNIRVQVSDGKFYEVDAMMTYRIIDPSLFCQSVSCDRIAAESRLRTRLDASIRRVYGLRRFDDA 140 (302)
Q Consensus 61 i~~v~~~~~r~~~~~~~~~~v~T~D~~~v~vd~~v~yrI~dp~~~~~~~~~~~~~~~~~l~~~~~~~lr~v~~~~~~~e~ 140 (302)
++++..+|+|.+.++.++.++.|+|++++.+++.++|||.||.+++.++.+ ++..|.+.+.+++|+++|+++++++
T Consensus 3 i~~v~~i~~r~~~~~~~~~~v~T~D~~~v~v~~~v~~ri~d~~~~~~~~~~----~~~~l~~~~~~~lr~~~~~~~~~ei 78 (114)
T 3bk6_A 3 FEKAVIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKN----YIMATSQISQTTLRSVIGQAHLDEL 78 (114)
T ss_dssp EEECCCCCSSCEEEEEEEEEEECTTSCEEEEEEEEEEEESCHHHHHHSSSC----HHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred EEEEEEEEEEEEEEECCCCEEECCCCCEEEEEEEEEEEEEECHHHHHCCCC----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 786289972578760798646738998899989999999563546650277----8889999999998887763018988
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHH
Q ss_conf 0121001589999999887422144310000001111
Q gi|254780959|r 141 LSKQREKMMMEVCEDLRYDAEKLGISIEDVRVLRTDL 177 (302)
Q Consensus 141 l~~~R~~i~~~v~~~l~~~~~~~GI~I~~V~I~~i~~ 177 (302)
++ +|+++++.+++.+++.+.+|||+|.+|.|+++++
T Consensus 79 ~~-~R~~i~~~i~~~l~~~l~~~Gi~i~~v~i~~i~L 114 (114)
T 3bk6_A 79 LS-ERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVEL 114 (114)
T ss_dssp HH-CHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEEEE
T ss_pred HC-CHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
T ss_conf 60-0788878899999887873485899987325699