RPSBLAST alignment for GI: 254780959 and conserved domain: TIGR01933

>gnl|CDD|130988 TIGR01933, hflK, HflK protein. HflK and HflC are paralogs encoded by tandem genes in Proteobacteria, spirochetes, and some other bacterial lineages. The HflKC complex is anchored in the membrane and exposed to the periplasm. The complex is not active as a protease, but rather binds to and appears to modulate the ATP-dependent protease FtsH. The overall function of HflKC is not fully described.//Regulation of FtsH by HflKC appears to be negative (PubMed:8947034,PubMed:96367). Length = 261
 Score = 88.6 bits (220), Expect = 2e-18
 Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 15/235 (6%)

Query: 24  FFIVDARQQAIVTRFGKIHATYREPGIYFKMPFSFMNVDRVKYLQKQIMRLNLDNIRVQV 83
            + +   ++ +V RFGK H T  +PG+ +K PF    ++ V  +    +R       +  
Sbjct: 1   IYTIGEAERGVVLRFGKYHRTV-DPGLNWKPPF----IEEVYPVNVTAVRNLRKQGLMLT 55

Query: 84  SDGKFYEVDAMMTYRIIDPSLFCQSVSCDRIAAESRLRTRLDASIRRVYGLRRFDDALSK 143
            D     V+  + YRI DP  +  SV       E  LR   D+++R V G    DD L++
Sbjct: 56  GDENIVNVEMNVQYRITDPYKYLFSVE----NPEDSLRQATDSALRGVIGDSTMDDILTE 111

Query: 144 QREKMMMEVCEDLR--YDAEKLGISIEDVRVLRTDLTQEVSQQTYDRMKAERLAEAEFIR 201
            R ++  +  E L    D   LGI++ DV        +EV ++ +D +   R  E  +I 
Sbjct: 112 GRSQIREDTKERLNEIIDNYDLGITVTDVNFQSARPPEEV-KEAFDDVIIAREDEERYIN 170

Query: 202 ARGREEGQKRMSIADRKATQILSEAR--RDSEINYGKGEAERGRILSNVFQKDPE 254
                   + +  A   A +I+ EAR  ++  IN  KG+  R   L   ++K P+
Sbjct: 171 -EAEAYANEVVPKARGDAQRIIEEARGYKERRINRAKGDVARFTKLLAEYKKAPD 224