RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780959|ref|YP_003065372.1| putative hydrolase serine
protease transmembrane protein [Candidatus Liberibacter asiaticus str.
psy62]
         (302 letters)



>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis
           [TaxId: 118562]}
          Length = 197

 Score = 26.1 bits (56), Expect = 3.9
 Identities = 7/27 (25%), Positives = 13/27 (48%)

Query: 181 VSQQTYDRMKAERLAEAEFIRARGREE 207
           VS      +  E + + EF+  +G +E
Sbjct: 159 VSAMVAQYVPDEEIIKREFLELKGIDE 185


>d2ac7a1 c.56.2.1 (A:2-232) Purine nucleoside phosphorylase, PNP
           {Bacillus anthracis [TaxId: 1392]}
          Length = 231

 Score = 25.5 bits (55), Expect = 5.2
 Identities = 7/30 (23%), Positives = 14/30 (46%)

Query: 237 GEAERGRILSNVFQKDPEFFEFYRSMRAYT 266
           G+  R + ++  F +D   +   R M  +T
Sbjct: 19  GDPLRAKYIAETFLEDVTCYNNVRGMLGFT 48


>d1l2pa_ f.23.21.1 (A:) F1F0 ATP synthase subunit B, membrane domain
           {Escherichia coli [TaxId: 562]}
          Length = 61

 Score = 25.3 bits (56), Expect = 6.8
 Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 14/56 (25%)

Query: 192 ERLAEAEFIRARGREEGQKRMSIADRKATQILSEARRDSEINYGKGEAERGRILSN 247
           ++L +A       + E Q  +  A+++ +QIL EA+        + E ER +I++ 
Sbjct: 2   DQLKKA-------KAEAQVIIEQANKRRSQILDEAK-------AEAEQERTKIVAQ 43


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.326    0.138    0.388 

Gapped
Lambda     K      H
   0.267   0.0448    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,126,897
Number of extensions: 53575
Number of successful extensions: 229
Number of sequences better than 10.0: 1
Number of HSP's gapped: 228
Number of HSP's successfully gapped: 13
Length of query: 302
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 217
Effective length of database: 1,240,546
Effective search space: 269198482
Effective search space used: 269198482
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 53 (24.9 bits)