HHsearch alignment for GI: 254780960 and conserved domain: COG4030

>COG4030 Uncharacterized protein conserved in archaea [Function unknown].
Probab=98.95  E-value=1.8e-08  Score=70.65  Aligned_cols=150  Identities=18%  Similarity=0.265  Sum_probs=109.4

Q ss_pred             HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCC--HHHHHCCCCHHHCCC--------
Q ss_conf             0045689887421134543389999998419869998167234223226550864--134310100000000--------
Q gi|254780960|r  138 TSTKIIDSLLEKKITYNPGGYELVHTMKQNGASTLLVTGGFSIFARFIAQHLGFD--QYYANRFIEKDDRLT--------  207 (297)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~g~~v~iisg~~~~~~~~ia~~lgi~--~~~a~~~~~~~~~~~--------  207 (297)
T Consensus        69 Vt~~dlrr~sE~sa~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L  147 (315)
T COG4030          69 VTNRDLRRISELSAKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELL  147 (315)
T ss_pred             CCHHHHHHHHHHHCCCCCCHHHHHHHHHCC-CCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf             768889999886310489859999987421-7866874229999999987629775543343114744568707799998


Q ss_pred             ----------C------------CCC----C------CCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHC-
Q ss_conf             ----------0------------015----6------310521138877532331037766799997892348899848-
Q gi|254780960|r  208 ----------G------------QVM----E------PIIDGTAKSQILLEAIQKLQINPEDTIAVGDGNNDLDMLRVA-  254 (297)
Q Consensus       208 ----------~------------~~~----~------~~~~~~~k~~~~~~l~~~~~~~~~~v~avGDg~ND~pmL~~A-  254 (297)
T Consensus       148 ~~~~~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~s-a~~VGDSItDv~ml~~~r  226 (315)
T COG4030         148 SIIDVIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFS-AVVVGDSITDVKMLEAAR  226 (315)
T ss_pred             HHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC-EEEECCCCCCHHHHHHHH
T ss_conf             8507511144778898899998602788898998764102675023899988761289965-267337531058999861


Q ss_pred             ---CCEEEECCCHHHHHHCCEEEECCCHHHHHHHCCCC
Q ss_conf             ---93189879578998589899569832767870988
Q gi|254780960|r  255 ---GYGVAFHAKPALAKQAKIRIDHSDLEALLYIQGYK  289 (297)
Q Consensus       255 ---gvGVA~~a~~~v~~~Ad~~~~~~dl~~~l~~~g~~  289 (297)
T Consensus       227 grGglAvaFNGNeYal~eAdVAvisp~~~a~~pvielf  264 (315)
T COG4030         227 GRGGLAVAFNGNEYALKEADVAVISPTAMAEAPVIELF  264 (315)
T ss_pred             CCCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHH
T ss_conf             46865899558701235454478655045440799999