HHsearch alignment for GI: 254780960 and conserved domain: PRK13478
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional.
Probab=99.18 E-value=1.3e-09 Score=77.71 Aligned_cols=130 Identities=18% Similarity=0.261 Sum_probs=89.0
Q ss_pred HHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 87421134543389999998419869998167234223226550864134310100000000001563105211388775
Q gi|254780960|r 146 LLEKKITYNPGGYELVHTMKQNGASTLLVTGGFSIFARFIAQHLGFDQYYANRFIEKDDRLTGQVMEPIIDGTAKSQILL 225 (297)
Q Consensus 146 ~~~~~~~~~~~~~~~i~~l~~~g~~v~iisg~~~~~~~~ia~~lgi~~~~a~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 225 (297)
T Consensus 95 ~l~~~~~piPGv~e~l~~Lr~~Gikig~~TG~~~~~~~~vl~~a~~~g~~pd~~------vs~d---dv~~grP~P~mi~ 165 (267)
T PRK13478 95 KLADYAAPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPAAAAQGYRPDHV------VATD---DVPAGRPAPWMAL 165 (267)
T ss_pred HHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEE------ECCC---CCCCCCCCHHHHH
T ss_conf 887306667449999999987498399978997899999999998559777758------5200---0799998979999
Q ss_pred HHHHHHCC-CCCEEEEEECCCCHHHHHHHCCC---EEEECC-------------------------CHHHH-HHCCEEEE
Q ss_conf 32331037-76679999789234889984893---189879-------------------------57899-85898995
Q gi|254780960|r 226 EAIQKLQI-NPEDTIAVGDGNNDLDMLRVAGY---GVAFHA-------------------------KPALA-KQAKIRID 275 (297)
Q Consensus 226 ~l~~~~~~-~~~~v~avGDg~ND~pmL~~Agv---GVA~~a-------------------------~~~v~-~~Ad~~~~ 275 (297)
T Consensus 166 ~a~~~Lgv~~~~~vvkVgDT~~dI~~G~nAG~~tVGv~~~~~~~gl~~~e~~~l~~~e~~~~~~~~~~~l~~aGa~yvi~ 245 (267)
T PRK13478 166 KNVIELGVYDVAACVKVDDTVPGIEEGRNAGMWTVGLILSGNELGLTEEEYQALDAAELAARRERARAKLRAAGAHYVID 245 (267)
T ss_pred HHHHHCCCCCHHHEEEECCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEC
T ss_conf 99998089986893777898889999997899289997056555879999984899999999999999999749998944
Q ss_pred C-CCHHHHHH
Q ss_conf 6-98327678
Q gi|254780960|r 276 H-SDLEALLY 284 (297)
Q Consensus 276 ~-~dl~~~l~ 284 (297)
T Consensus 246 ~i~dLp~~i~ 255 (267)
T PRK13478 246 TIADLPAVIA 255 (267)
T ss_pred CHHHHHHHHH
T ss_conf 8988899999