HHsearch alignment for GI: 254780960 and conserved domain: TIGR01545
>TIGR01545 YfhB_g-proteo HAD superfamily (subfamily IF) hydrolase, YfhB; InterPro: IPR006435 This group describes a clade of sequences limited to the gamma proteobacteria. This group is a member of the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases and all of the conserved catalytic motifs are present . Although structurally similar to subfamily IA in that the variable domain is predicted to consist of five consecutive alpha helices (by PSI-PRED), it is sufficiently divergent to warrant being regarded as a separate sub-family (IF)..
Probab=94.86 E-value=0.15 Score=28.26 Aligned_cols=176 Identities=13% Similarity=0.102 Sum_probs=97.2
Q ss_pred CCCCEEEECCCEEEEECCCCHHHHHHH------------------HCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 534448722750265245200278874------------------12232778887652024410012345568764200
Q gi|254780960|r 78 RRKNLLIADMDSTMIEQECIDELADLI------------------GIKEKVSLITARAMNGEIPFQDSLRERISLFKGTS 139 (297)
Q Consensus 78 ~~~~l~~~d~d~tli~~~~l~~~a~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (297)
T Consensus 3 ~~~r~~ffdldGtlhqqdmfGsflr~llr~~Pln~llv~PllP~i~~~ll~~Gr~arWPmslllW~~tfG~~ea~l~~l~ 82 (210)
T TIGR01545 3 GEKRVVFFDLDGTLHQQDMFGSFLRYLLRRLPLNLLLVLPLLPLIAVALLVKGRAARWPMSLLLWAMTFGRREARLRDLE 82 (210)
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 87347998358621146667899999987340778889866889998888435311002889998643051156888889
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHCCCCHHHCCCCCCCCCC-CCHH
Q ss_conf 456898874211345433899999984198699981672342232265508641343101000000000015631-0521
Q gi|254780960|r 140 TKIIDSLLEKKITYNPGGYELVHTMKQNGASTLLVTGGFSIFARFIAQHLGFDQYYANRFIEKDDRLTGQVMEPI-IDGT 218 (297)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~g~~v~iisg~~~~~~~~ia~~lgi~~~~a~~~~~~~~~~~~~~~~~~-~~~~ 218 (297)
T Consensus 83 ~~fv~~fr~~vt~fP~v~~rl~~yl~ssda~~WlitGsPq~lve~vy~d~~~~----~r~~li~s~~~r~~GGWvl~~rC 158 (210)
T TIGR01545 83 ADFVAAFRDKVTEFPLVAERLRTYLLSSDAEVWLITGSPQRLVEAVYFDSNFL----HRLRLIASRIERRYGGWVLTLRC 158 (210)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCHHH----HHHHHHHHHHHCCCCCEEEEEEE
T ss_conf 99999998732016278999999862057736897468678888775042157----78888876542046863787652
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCE
Q ss_conf 138877532331037766799997892348899848931
Q gi|254780960|r 219 AKSQILLEAIQKLQINPEDTIAVGDGNNDLDMLRVAGYG 257 (297)
Q Consensus 219 ~k~~~~~~l~~~~~~~~~~v~avGDg~ND~pmL~~AgvG 257 (297)
T Consensus 159 lG~ekv~qle~~~G~Pl~lysGysds~qdnPll~fC~hr 197 (210)
T TIGR01545 159 LGHEKVVQLERKLGSPLKLYSGYSDSKQDNPLLAFCEHR 197 (210)
T ss_pred CCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHCCC
T ss_conf 465889999876088501201444343364365542000