HHsearch alignment for GI: 254780960 and conserved domain: TIGR01662
>TIGR01662 HAD-SF-IIIA hydrolase, HAD-superfamily, subfamily IIIA; InterPro: IPR006549 This group of proteins is a part of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class III subfamilies are characterised by the lack of any domains located either between the first and second conserved catalytic motifs (as in the Class I subfamilies) or between the second and third conserved catalytic motifs (as in the Class II subfamilies) of the superfamily domain , . The IIIA subfamily contains five major clades: histidinol-phosphatase , histidinol-phosphatase-related protein, DNA 3-phosphatase and sequences related to YqeG and YrbI..
Probab=97.53 E-value=0.00043 Score=43.84 Aligned_cols=107 Identities=22% Similarity=0.325 Sum_probs=69.3
Q ss_pred CCCCCHHH--HHHHHH-HCCCEEEEEECCC----------------HHHHHHHHHHHCCCHHHHHCCCCHHHCCCCCCCC
Q ss_conf 34543389--999998-4198699981672----------------3422322655086413431010000000000156
Q gi|254780960|r 152 TYNPGGYE--LVHTMK-QNGASTLLVTGGF----------------SIFARFIAQHLGFDQYYANRFIEKDDRLTGQVME 212 (297)
Q Consensus 152 ~~~~~~~~--~i~~l~-~~g~~v~iisg~~----------------~~~~~~ia~~lgi~~~~a~~~~~~~~~~~~~~~~ 212 (297)
T Consensus 28 ~~~~~~~~Gl~~~~l~W~~G~~v~i~tN~~Gigrg~~~~~~~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~GkG~~~~ 107 (171)
T TIGR01662 28 ELYPGVIDGLALAELKWKAGYKVVIVTNQSGIGRGYFSDAVSVREVSERVARRLEELGVPIDVLYACPHHHSDGKGEAVE 107 (171)
T ss_pred HHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCC
T ss_conf 40688600189998887459769999788742111268078999999999988876088256888850106677777666
Q ss_pred CCCCHHH--HHHHHHHHHHHH---CCCCCEEEEEEC-CC---CHHHHHHHCCCEE
Q ss_conf 3105211--388775323310---377667999978-92---3488998489318
Q gi|254780960|r 213 PIIDGTA--KSQILLEAIQKL---QINPEDTIAVGD-GN---NDLDMLRVAGYGV 258 (297)
Q Consensus 213 ~~~~~~~--k~~~~~~l~~~~---~~~~~~v~avGD-g~---ND~pmL~~AgvGV 258 (297)
T Consensus 108 ~c~~RKPlC~~g~~~~~~~~~NdG~~~~~~~~~vGD~~~~L~~D~~~~~~~G~~~ 162 (171)
T TIGR01662 108 DCSCRKPLCKPGMFLEALKRLNDGEIDPKESVVVGDQDLSLSTDLEAAKRVGLAT 162 (171)
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCC
T ss_conf 8885578577889999998588998780388887116767221267886268621