HHsearch alignment for GI: 254780960 and conserved domain: TIGR01993
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase; InterPro: IPR010237 This family of proteins includes the SDT1/SSM1 gene from yeast, which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily..
Probab=96.85 E-value=0.0095 Score=35.60 Aligned_cols=100 Identities=17% Similarity=0.268 Sum_probs=70.0
Q ss_pred CCCCHHHHHHHHHHCC--CEEEEEECCCHHHHHHHHHHHCCCHHHHHCCCCHHHCCC--------CCCCCCCCCHHHHHH
Q ss_conf 4543389999998419--869998167234223226550864134310100000000--------001563105211388
Q gi|254780960|r 153 YNPGGYELVHTMKQNG--ASTLLVTGGFSIFARFIAQHLGFDQYYANRFIEKDDRLT--------GQVMEPIIDGTAKSQ 222 (297)
Q Consensus 153 ~~~~~~~~i~~l~~~g--~~v~iisg~~~~~~~~ia~~lgi~~~~a~~~~~~~~~~~--------~~~~~~~~~~~~k~~ 222 (297)
T Consensus 87 pdp~L~~~L~~LpqsGK~~Rk~iFTN~~~~Ha~r~l~~LGi~d~FD~i~~~~~~~~~lfGeaP~ss-dd~~~~~~KP~~~ 165 (205)
T TIGR01993 87 PDPELRNLLLRLPQSGKKGRKIIFTNGDRAHARRALNRLGIEDCFDGIFDIDTANPDLFGEAPYSS-DDETLLIPKPSPE 165 (205)
T ss_pred CCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCHHHCCCCEEEHHHHCHHHCCCCCCCC-CCCCCCCCCCCHH
T ss_conf 898899999973412655556776158789999999864721204642305120412316888788-8876312088889
Q ss_pred HHHHHHHHHC-CCCCEEEEEECCCCHHHHHHH
Q ss_conf 7753233103-776679999789234889984
Q gi|254780960|r 223 ILLEAIQKLQ-INPEDTIAVGDGNNDLDMLRV 253 (297)
Q Consensus 223 ~~~~l~~~~~-~~~~~v~avGDg~ND~pmL~~ 253 (297)
T Consensus 166 ay~~~~~~~~~vd~~~~~f~DDS~rNi~~~ka 197 (205)
T TIGR01993 166 AYEKALREAGVVDPERAIFFDDSARNIAAAKA 197 (205)
T ss_pred HHHHHHHHHCCCCCCCEEEECCCHHHHHHHHH
T ss_conf 99999998558872001753046878887887