HHsearch alignment for GI: 254780960 and conserved domain: pfam11019
>pfam11019 DUF2608 Protein of unknown function (DUF2608). This family is conserved in Bacteria. The function is not known.
Probab=95.21 E-value=0.22 Score=27.31 Aligned_cols=110 Identities=19% Similarity=0.222 Sum_probs=73.0
Q ss_pred HCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH---HHCCCHHHHHCCCCH-----------HHCCCCCCCC-CC
Q ss_conf 11345433899999984198699981672342232265---508641343101000-----------0000000156-31
Q gi|254780960|r 150 KITYNPGGYELVHTMKQNGASTLLVTGGFSIFARFIAQ---HLGFDQYYANRFIEK-----------DDRLTGQVME-PI 214 (297)
Q Consensus 150 ~~~~~~~~~~~i~~l~~~g~~v~iisg~~~~~~~~ia~---~lgi~~~~a~~~~~~-----------~~~~~~~~~~-~~ 214 (297)
T Consensus 78 ~~lie~~~~~~i~~l~~~~~~v~glT~~~~~~~~~t~~~Lk~l~i~Fs~~a-~~~~~~~~~~~~~~~~~~~~~~~~GIlf 156 (251)
T pfam11019 78 MELIESDVPSLINKLQNKGITVLGLTERPPNMESWTLRELKRLGIDFSSSS-FPEDGFIKFPVTDSALSRAPVFYKGILF 156 (251)
T ss_pred EEEECHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCEEEECEEE
T ss_conf 487157389999999978993999838981069999999998795655577-8766641154456777888735616688
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHC--CCEEEE
Q ss_conf 0521138877532331037766799997892348899848--931898
Q gi|254780960|r 215 IDGTAKSQILLEAIQKLQINPEDTIAVGDGNNDLDMLRVA--GYGVAF 260 (297)
Q Consensus 215 ~~~~~k~~~~~~l~~~~~~~~~~v~avGDg~ND~pmL~~A--gvGVA~ 260 (297)
T Consensus 157 t~~~~Kg~~L~~fL~~~~~~P~~IIfIDd~~enl~s~~~~ck~~~I~f 204 (251)
T pfam11019 157 TGGLNKGEMLKYFLDKTNQSPKKIIFVDDNKENLESMGEACKKANILF 204 (251)
T ss_pred ECCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCE
T ss_conf 479643899999999707688659997598899999999996589947