RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= gi|254780960|ref|YP_003065373.1| phosphoserine phosphatase SerB [Candidatus Liberibacter asiaticus str. psy62] (297 letters) >gnl|CDD|30906 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism]. Length = 212 Score = 213 bits (544), Expect = 4e-56 Identities = 89/210 (42%), Positives = 126/210 (60%) Query: 78 RRKNLLIADMDSTMIEQECIDELADLIGIKEKVSLITARAMNGEIPFQDSLRERISLFKG 137 R K L + D+D T+I E IDELA G+ E+V IT RAM GE+ F++SLR R++L KG Sbjct: 3 RMKKLAVFDLDGTLINAELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKG 62 Query: 138 TSTKIIDSLLEKKITYNPGGYELVHTMKQNGASTLLVTGGFSIFARFIAQHLGFDQYYAN 197 ++++ + E+ + PG ELV +K GA ++++GGF+ IA+ LG D AN Sbjct: 63 LPVEVLEEVREEFLRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVAN 122 Query: 198 RFIEKDDRLTGQVMEPIIDGTAKSQILLEAIQKLQINPEDTIAVGDGNNDLDMLRVAGYG 257 D +LTG+V+ PI DG K++ L E +L I E+T+A GD NDL ML AG Sbjct: 123 ELEIDDGKLTGRVVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLP 182 Query: 258 VAFHAKPALAKQAKIRIDHSDLEALLYIQG 287 +A + KP L A +RI DL A+LY+ G Sbjct: 183 IAVNPKPKLRALADVRIWPIDLRAVLYLLG 212 >gnl|CDD|36828 KOG1615, KOG1615, KOG1615, Phosphoserine phosphatase [Amino acid transport and metabolism]. Length = 227 Score = 156 bits (395), Expect = 9e-39 Identities = 66/219 (30%), Positives = 105/219 (47%), Gaps = 9/219 (4%) Query: 78 RRKNLLIADMDSTMIEQECIDELADLIGIKEKVSLITARAMNGEIPFQDSLRERISLFKG 137 R + + D+DST+I++E IDELA G+ E V+ +T RAMNGE FQ++L R+SL + Sbjct: 14 RSADAVCFDVDSTVIQEEGIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQP 73 Query: 138 TSTKIIDSLLEKKITYNPGGYELVHTMKQNGASTLLVTGGFSIFARFIAQHLGFD--QYY 195 ++ ++++K T PG ELV + G L++GGF +A+ LG Y Sbjct: 74 LQVQVEQFVIKQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIY 133 Query: 196 ANRFIEKDD--RLTGQVMEPIIDGTAKSQILLEAIQKLQINPEDTIAVGDGNNDLDMLRV 253 AN + D L EP D K++++ + N + + VGDG DL+ + Sbjct: 134 ANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALLRKNY--NYKTIVMVGDGATDLEAMPP 191 Query: 254 AGYGVAFHAKPALAKQAKIRIDHSDLEALLYIQGYKKDE 292 A AF + ++ + Y+ G DE Sbjct: 192 A---DAFIGFGGNVIREGVKANAKWYVTDFYVLGGDLDE 227 >gnl|CDD|144342 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase. This family are structurally different from the alpha/ beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of (S)-2-haloacid dehalogenase from Pseudomonas sp. CBS3. The rest of the fold is composed of the core alpha/beta domain. Length = 190 Score = 60.0 bits (145), Expect = 8e-10 Identities = 41/199 (20%), Positives = 70/199 (35%), Gaps = 34/199 (17%) Query: 81 NLLIADMDSTMIEQ-----ECIDELADLIGIKEKVSL-----ITARAMNGEIPFQDSLRE 130 ++ D D T+ + E I E A +G+ + L + R + G Sbjct: 2 KAVVFDKDGTLTDGEPPIAEAIVEAAAELGLPLLLPLEEVEKLLGRGVEGIERILLEGGL 61 Query: 131 RISLFKGTSTKIIDS--------------LLEKKITYNPGGYELVHTMKQNGASTLLVTG 176 L ++ L+ PG E + +K+ G ++T Sbjct: 62 TAELLLELEGELAAGKTAVLVALDGEVLGLIALADKLYPGAREALKALKERGIKVAILTN 121 Query: 177 GFSIFARFIAQHLGFDQYYANRFIEKDDRLTGQVMEPIIDGTAKSQILLEAIQKLQINPE 236 G A + + LG I D + +P +I L+A+++L + PE Sbjct: 122 GDRANAEAVLEALGLADL--FDVIVDSDDVGPVKPKP--------EIFLKALERLGVKPE 171 Query: 237 DTIAVGDGNNDLDMLRVAG 255 + + VGDG ND L AG Sbjct: 172 EVLMVGDGVNDAPALAAAG 190 >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.. Length = 139 Score = 57.0 bits (138), Expect = 6e-09 Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 16/136 (11%) Query: 137 GT---STKIIDSLLEKKITYNPGGYELVHTMKQNGASTLLVTGGFSIFARFIAQHLGFDQ 193 GT S I + E ++ PG E + +K+ G L T + + LG D Sbjct: 8 GTLLDSEPGIAEIEELELY--PGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDD 65 Query: 194 Y--------YANRFIEKDDRLTGQVMEPIIDGTAKSQILLEAIQKLQINPEDTIAVGDGN 245 Y A + K+ G P G LL A++ L ++PE+ + VGD Sbjct: 66 YFDPVITSNGAAIYYPKEGLFLGG--GPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSL 123 Query: 246 NDLDMLRVAG-YGVAF 260 ND++M + AG GVA Sbjct: 124 NDIEMAKAAGGLGVAV 139 >gnl|CDD|30907 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]. Length = 264 Score = 51.3 bits (122), Expect = 3e-07 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query: 217 GTAKSQILLEAIQKLQINPEDTIAVGDGNNDLDMLRVAGYGVAFH-AKPALAKQAKIRID 275 G +K L + L I E+ IA GD ND++ML VAG GVA A L + A Sbjct: 187 GVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTT 246 Query: 276 HSDLEALLYI 285 +D + + Sbjct: 247 SNDEDGVAEA 256 >gnl|CDD|32399 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]. Length = 713 Score = 50.2 bits (120), Expect = 7e-07 Identities = 32/132 (24%), Positives = 49/132 (37%), Gaps = 22/132 (16%) Query: 155 PGGYELVHTMKQNGASTLLVTGGFSIFARFIAQHLGFDQYYANRFIEKDDRLTGQVMEPI 214 P E + +K G +++TG A IA+ LG D+ A E Sbjct: 540 PDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELLPEDK----------- 588 Query: 215 IDGTAKSQILLEAIQKLQINPEDTIAVGDGNNDLDMLRVAGYGVAFHAKPALAKQ-AKIR 273 E +++LQ VGDG ND L A G+A + +A + A + Sbjct: 589 ----------AEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVV 638 Query: 274 IDHSDLEALLYI 285 + DL A+ Sbjct: 639 LMRDDLSAVPEA 650 >gnl|CDD|30892 COG0546, Gph, Predicted phosphatases [General function prediction only]. Length = 220 Score = 48.6 bits (115), Expect = 2e-06 Identities = 41/194 (21%), Positives = 71/194 (36%), Gaps = 21/194 (10%) Query: 98 DELADLIGIKEKVSLITARAMNGEIPFQDSLRERISLFKGTSTKIIDSLLEKKITYNPGG 157 +E+ LIG+ + E + + F ++++S L PG Sbjct: 41 EEIRQLIGLGLDELIERLLGEADEEAAAELVERLREEFLTAYAELLESRLF------PGV 94 Query: 158 YELVHTMKQNGASTLLVTGGFSIFARFIAQHLGFDQYYANRFIEKDDRLTGQVMEPIIDG 217 EL+ +K G +VT + + LG Y+ D +P + Sbjct: 95 KELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVP----PPKPDPEP 150 Query: 218 TAKSQILLEAIQKLQINPEDTIAVGDGNNDLDMLRVAGY---GVAFHAKPA--LAKQAKI 272 LL ++KL ++PE+ + VGD ND+ + AG GV + LA+ Sbjct: 151 ------LLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGAD 204 Query: 273 RIDHSDLEALLYIQ 286 + S E L + Sbjct: 205 VVIDSLAELLALLA 218 >gnl|CDD|35428 KOG0207, KOG0207, KOG0207, Cation transport ATPase [Inorganic ion transport and metabolism]. Length = 951 Score = 48.0 bits (114), Expect = 3e-06 Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 21/116 (18%) Query: 155 PGGYELVHTMKQNGASTLLVTGGFSIFARFIAQHLGFDQYYANRFIEKDDRLTGQVMEPI 214 P V +K G +++TG AR +AQ +G D YA Sbjct: 726 PDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDNVYAE----------------- 768 Query: 215 IDGTAKSQILLEAIQKLQINPEDTIAVGDGNNDLDMLRVAGYGVAFHAKPALAKQA 270 + E I+++Q N VGDG ND L A G+A A +A +A Sbjct: 769 ----VLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEA 820 >gnl|CDD|34074 COG4359, COG4359, Uncharacterized conserved protein [Function unknown]. Length = 220 Score = 43.0 bits (101), Expect = 9e-05 Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 13/177 (7%) Query: 79 RKNLLIADMDSTMIEQECIDELADLIGIKEKVSLITARAMNGEIPFQDSLRERISLFKGT 138 +K ++ +D D T+ + D + D G + + ++ I F+D + Sbjct: 2 KKPVIFSDFDGTITLNDSNDYITDTFG-PGEWKALKDGVLSKTISFRDGFGRMFGSI-HS 59 Query: 139 STKIIDSLLEKKITYNPGGYELVHTMKQNGASTLLVTGGFSIFAR-FIAQHLGFDQYYAN 197 S + I L K I +PG E V +K++ ++V+ G F +G ++ Y Sbjct: 60 SLEEILEFLLKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCI 119 Query: 198 RFIEKDDRLTGQVMEPIID------GTAKSQILLEAIQKLQINPEDTIAVGDGNNDL 248 + +D + I G KS + I +L E GD +DL Sbjct: 120 DIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSV----IHELSEPNESIFYCGDSVSDL 172 >gnl|CDD|32398 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]. Length = 681 Score = 41.7 bits (98), Expect = 2e-04 Identities = 40/167 (23%), Positives = 64/167 (38%), Gaps = 27/167 (16%) Query: 115 ARAMNGEIP-FQDSLRERISLFKGTSTKIIDS-----LLEKKITYNPGGYELVHTMKQNG 168 R G IP D+ + +S GT ++++ ++ K PG E +++ G Sbjct: 404 VRERGGHIPEDLDAAVDEVSRLGGTPLVVVENGRILGVIYLKDIVKPGIKERFAELRKMG 463 Query: 169 ASTLLVTGGFSIFARFIAQHLGFDQYYANRFIEKDDRLTGQVMEPIIDGTAKSQILLEAI 228 T+++TG + A IA G D + A A + L I Sbjct: 464 IKTVMITGDNPLTAAAIAAEAGVDDFIAE---------------------ATPEDKLALI 502 Query: 229 QKLQINPEDTIAVGDGNNDLDMLRVAGYGVAFHAKPALAKQAKIRID 275 ++ Q GDG ND L A GVA ++ AK+A +D Sbjct: 503 RQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVD 549 >gnl|CDD|30982 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]. Length = 221 Score = 39.7 bits (92), Expect = 0.001 Identities = 42/215 (19%), Positives = 72/215 (33%), Gaps = 26/215 (12%) Query: 82 LLIADMDSTMIEQE-----CIDELADLIGIKEKVSLI-------TARAMNGEIPFQDSLR 129 +I DMD T+++ E E GI+ I AR ++ Sbjct: 4 AVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGED 63 Query: 130 ERISLFKGTSTKIIDSLLEKKITYNPGGYELVHTMKQNGASTLLVTGGFSIFARFIAQHL 189 ++L + + PG EL+ +K G + + A + L Sbjct: 64 PADLAELERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARL 123 Query: 190 GFDQYYANRFIEKDDRLTGQVMEPIIDGTAKSQILLEAIQKLQINPEDTIAVGDGNNDLD 249 G Y+ D +T + + G I L A ++L ++PE+ + V D + Sbjct: 124 GLLDYF-------DVIVTA---DDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQ 173 Query: 250 MLRVAG----YGVAFHAKPALAKQAKIRIDHSDLE 280 + AG A H +P L D L+ Sbjct: 174 AAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLLD 208 >gnl|CDD|35431 KOG0210, KOG0210, KOG0210, P-type ATPase [Inorganic ion transport and metabolism]. Length = 1051 Score = 36.1 bits (83), Expect = 0.012 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 12/88 (13%) Query: 193 QYYANRFIEKDDRLTGQVM---EPIIDGTAKSQILLEAIQKLQINPEDTIAVGDGNNDLD 249 +YY + FIE L V P T K+Q++ +K A+GDG ND+ Sbjct: 743 KYYEDEFIELVCELPAVVCCRCTP----TQKAQVVRLLQKKTGKR---VCAIGDGGNDVS 795 Query: 250 MLRVAGYGVAFHAKPALAKQAKIRIDHS 277 M++ A G+ K KQA + D S Sbjct: 796 MIQAADVGIGIVGKE--GKQASLAADFS 821 >gnl|CDD|30822 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]. Length = 917 Score = 35.7 bits (82), Expect = 0.017 Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 18/118 (15%) Query: 155 PGGYELVHTMKQNGASTLLVTGGFSIFARFIAQHLGFDQYYANRFIEKDDRLTGQVMEPI 214 E + +++ G ++TG A IA+ G + E + G ++ + Sbjct: 550 EDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEA-----EAESALVIDGAELDAL 604 Query: 215 IDGTAKSQILLEAI-------QKLQI------NPEDTIAVGDGNNDLDMLRVAGYGVA 259 D + ++ QK +I + GDG ND L+ A G+A Sbjct: 605 SDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIA 662 >gnl|CDD|38330 KOG3120, KOG3120, KOG3120, Predicted haloacid dehalogenase-like hydrolase [General function prediction only]. Length = 256 Score = 33.8 bits (77), Expect = 0.065 Identities = 42/203 (20%), Positives = 76/203 (37%), Gaps = 21/203 (10%) Query: 76 ENRRKNLLIADMDSTMIEQECIDELADLIGIKEKVSLITARAMNGEIPFQDSLRERISLF 135 + + LL+ D D T+I+Q+ + + D + + + + G F + L +R+ Sbjct: 9 SSSPRILLVFDFDRTIIDQDSDNWVVDELPTTDLFNQLRDTYPKG---FWNELMDRVFKE 65 Query: 136 KGTSTKIIDSLLE--KKITYNPGGYELVHTMKQNGASTL-LVTGGFSIFARFIAQHLGFD 192 I + + + I PG L+ + + G L +V+ S F I + G Sbjct: 66 LHEQGVRIAEIKQVLRSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIH 125 Query: 193 QYYANRF-----IEKDDRLTGQVMEPIID------GTAKSQILLEAIQKL---QINPEDT 238 ++ F ++ RL + K +L E + + E Sbjct: 126 DLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERL 185 Query: 239 IAVGDGNNDL-DMLRVAGYGVAF 260 I VGDG ND +LR+ VA Sbjct: 186 IYVGDGANDFCPVLRLRACDVAM 208 >gnl|CDD|31964 COG1778, COG1778, Low specificity phosphatase (HAD superfamily) [General function prediction only]. Length = 170 Score = 33.2 bits (76), Expect = 0.084 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 220 KSQILLEAIQKLQINPEDTIAVGDGNNDLDMLRVAGYGVA-FHAKPALAKQA 270 K E ++KL ++PE+ VGD DL ++ G VA A P L ++A Sbjct: 84 KLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRA 135 >gnl|CDD|33789 COG4030, COG4030, Uncharacterized protein conserved in archaea [Function unknown]. Length = 315 Score = 33.1 bits (75), Expect = 0.097 Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 4/73 (5%) Query: 217 GTAKSQILLEAIQKLQINPEDTIAVGDGNNDLDMLRVA----GYGVAFHAKPALAKQAKI 272 G + ++E +L+ + VGD D+ ML A G VAF+ K+A + Sbjct: 188 GGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYALKEADV 247 Query: 273 RIDHSDLEALLYI 285 + A + Sbjct: 248 AVISPTAMAEAPV 260 >gnl|CDD|147342 pfam05116, S6PP, Sucrose-6F-phosphate phosphohydrolase. This family consists of Sucrose-6F-phosphate phosphohydrolase proteins found in plants and cyanobacteria. Sucrose-6(F)-phosphate phosphohydrolase catalyses the final step in the pathway of sucrose biosynthesis. Length = 247 Score = 32.6 bits (75), Expect = 0.13 Identities = 13/42 (30%), Positives = 20/42 (47%) Query: 217 GTAKSQILLEAIQKLQINPEDTIAVGDGNNDLDMLRVAGYGV 258 +K Q L +K + PE+T+ GD ND ++ GV Sbjct: 163 RASKGQALRYLAKKWGLPPENTLVCGDSGNDAELFIGGVRGV 204 >gnl|CDD|35427 KOG0206, KOG0206, KOG0206, P-type ATPase [General function prediction only]. Length = 1151 Score = 31.8 bits (72), Expect = 0.25 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 7/55 (12%) Query: 238 TIAVGDGNNDLDMLRVAGYGVAFHAKPALAKQAKIRIDHS-----DLEALLYIQG 287 T+A+GDG ND+ M++ A GV + + QA + D + LE LL + G Sbjct: 797 TLAIGDGANDVSMIQEAHVGVGISGQEGM--QAVMSSDFAIAQFRFLERLLLVHG 849 >gnl|CDD|33844 COG4087, COG4087, Soluble P-type ATPase [General function prediction only]. Length = 152 Score = 30.3 bits (68), Expect = 0.60 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 199 FIEKDDRLTGQVMEPIIDGTAKSQILLEAIQKLQINPEDTIAVGDGNNDLDMLRVAGYGV 258 + + G +E + G A ++ + I++L+ E + VG+G ND+ LR A G+ Sbjct: 58 SLVQLAEFVGIPVERVFAG-ADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGI 116 >gnl|CDD|111165 pfam02241, MCR_beta, Methyl-coenzyme M reductase beta subunit, C-terminal domain. Methyl-coenzyme M reductase (MCR) is the enzyme responsible for microbial formation of methane. It is a hexamer composed of 2 alpha (pfam02249), 2 beta (this family), and 2 gamma (pfam2240) subunits with two identical nickel porphinoid active sites. The C-terminal domain of MCR beta has an all-alpha fold with buried central helix. Length = 255 Score = 29.4 bits (66), Expect = 1.2 Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 4/75 (5%) Query: 79 RKNLLIADMDSTMIEQECIDELADLIGIKEKVSLI--TARAMNGEIPFQDSLRERISLFK 136 RKN + A S+++EQ + E+ D +G E++ L+ + +N + D ++ + Sbjct: 17 RKNTMNAVALSSILEQTAMFEMGDAVGAFERLHLLGLAYQGLNADNLVFDLVKANGK--E 74 Query: 137 GTSTKIIDSLLEKKI 151 GT ++ S++E+ + Sbjct: 75 GTVGTVVASVVERAL 89 >gnl|CDD|37680 KOG2469, KOG2469, KOG2469, IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]. Length = 424 Score = 29.2 bits (65), Expect = 1.3 Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 14/144 (9%) Query: 55 HRSKILS---IIADKPIDLIIHRHENRRKNLLIADMDSTMIEQECIDELADLIGIKEKVS 111 H ++ LS I L+ + M + + +D L + G + Sbjct: 104 HGTRFLSNEEISEIYGRKLVRLSDSRYYLLNTLFSMPEADLFAQAVDFLDN--GPEYGPV 161 Query: 112 LITARAMNGEIPFQDSLRERISL--FKGTSTKIIDSLLEKKITYNPGGYELVHTMKQNGA 169 + + ++D +R + G K + E+ + Y+ L+ ++ +G Sbjct: 162 DMDYKPG-----WKD-VRAAGNAVHLYGLLKKKMMGKPERYVVYDGTIVPLLSMLRDSGK 215 Query: 170 STLLVTGGFSIFA-RFIAQHLGFD 192 T L T + F+A H GFD Sbjct: 216 KTFLHTNSDWDYTDIFMAFHYGFD 239 >gnl|CDD|35423 KOG0202, KOG0202, KOG0202, Ca2+ transporting ATPase [Inorganic ion transport and metabolism]. Length = 972 Score = 28.7 bits (64), Expect = 2.0 Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 16/118 (13%) Query: 155 PGGYELVHTMKQNGASTLLVTGGFSIFARFIAQHLGFDQYYANRFIEKDDRLTGQVMEPI 214 P + + +Q G +++TG A IA+ +G ++ LTG + + Sbjct: 587 PEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGI---FSEDEDVSSMALTGSEFDDL 643 Query: 215 IDGT---AKSQIL----------LEAIQKLQINPEDTIAVGDGNNDLDMLRVAGYGVA 259 D A ++L L+ ++ LQ E GDG ND L+ A G+A Sbjct: 644 SDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIA 701 >gnl|CDD|38295 KOG3085, KOG3085, KOG3085, Predicted hydrolase (HAD superfamily) [General function prediction only]. Length = 237 Score = 28.4 bits (63), Expect = 2.6 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Query: 222 QILLEAIQKLQINPEDTIAVGD-GNNDLDMLRVAG 255 +I A+++L + PE+ + +GD ND + R G Sbjct: 172 RIFQLALERLGVKPEECVHIGDLLENDYEGARNLG 206 >gnl|CDD|35430 KOG0209, KOG0209, KOG0209, P-type ATPase [Inorganic ion transport and metabolism]. Length = 1160 Score = 28.0 bits (62), Expect = 2.9 Identities = 17/54 (31%), Positives = 25/54 (46%) Query: 228 IQKLQINPEDTIAVGDGNNDLDMLRVAGYGVAFHAKPALAKQAKIRIDHSDLEA 281 I L+ T+ GDG ND+ L+ A GVA P +K+ K + L+ Sbjct: 799 ITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKL 852 >gnl|CDD|33812 COG4054, McrB, Methyl coenzyme M reductase, beta subunit [Coenzyme metabolism]. Length = 447 Score = 26.5 bits (58), Expect = 9.1 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 4/75 (5%) Query: 79 RKNLLIADMDSTMIEQECIDELADLIGIKEKVSLI--TARAMNGEIPFQDSLRERISLFK 136 RKN + A S+++EQ + E+ D +G E++ L+ + +N D ++E Sbjct: 208 RKNTMNAVALSSILEQTAMFEMGDAVGAFERLHLLGLAYQGLNANNLVYDLVKENGK--D 265 Query: 137 GTSTKIIDSLLEKKI 151 GT +I S++E+ + Sbjct: 266 GTVGTVIASVVERAL 280 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.322 0.139 0.390 Gapped Lambda K H 0.267 0.0764 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 3,503,451 Number of extensions: 187812 Number of successful extensions: 485 Number of sequences better than 10.0: 1 Number of HSP's gapped: 476 Number of HSP's successfully gapped: 38 Length of query: 297 Length of database: 6,263,737 Length adjustment: 93 Effective length of query: 204 Effective length of database: 4,254,100 Effective search space: 867836400 Effective search space used: 867836400 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 57 (25.7 bits)