RPSBLAST alignment of GI: 254780960 and protein with PDBid: 3dnp
>3dnp_A Stress response protein YHAX; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.85A {Bacillus subtilis} Length = 290
Score = 50.3 bits (119), Expect = 6e-07
Identities = 45/264 (17%), Positives = 89/264 (33%), Gaps = 58/264 (21%)
Query: 80 KNLLIADMDSTM------IEQECIDELADLIGIKEKVSLITARAMNGEIPFQDSLRERIS 133
K LL ++D + I Q D + + V+L+T R SL+
Sbjct: 6 KQLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAK 65
Query: 134 LFKGTSTKIIDS---LLEKKITYNPGGYELVHTMKQNGASTLLVTGGFSIFARFIA---- 186
L + I + +K + + +V ++ + L+ +SI +
Sbjct: 66 LITHSGAYIAEKIDAPFFEKRISDDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNL 125
Query: 187 -----QHLGFDQYYANRFIEKDDRL----------------------------------- 206
H +Y +F+E L
Sbjct: 126 LGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIEVYTEHDIQHDITETITKAFPAVD 185
Query: 207 ----TGQVMEPIIDGTAKSQILLEAIQKLQINPEDTIAVGDGNNDLDMLRVAGYGVAF-H 261
+ + + G +K L +L ++ +D +A+G +DL M+ +AG GVA +
Sbjct: 186 VIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGN 245
Query: 262 AKPALAKQAKIRIDHSDLEALLYI 285
A P + ++A +D + + Y+
Sbjct: 246 AVPEIKRKADWVTRSNDEQGVAYM 269