RPSBLAST alignment of GI: 254780960 and protein with PDBid: 3fvv

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein structure initiative; 2.10A {Bordetella pertussis} Length = 232

 Score =  118 bits (296), Expect = 1e-27
 Identities = 37/213 (17%), Positives = 74/213 (34%), Gaps = 19/213 (8%)

Query: 80  KNLLIADMDSTMIEQECIDELA----------DLIGIKEKVSLITARAMNGEIPFQDSLR 129
           + L + D+D T++  +   + A          D    + +   +  R   GE+  + +  
Sbjct: 4   RRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAE 63

Query: 130 ERISLFKGTSTKIIDSLLEK------KITYNPGGYELVHTMKQNGASTLLVTGGFSIFAR 183
             + L    S   + +  E+      + +      ++V      G    LVT   S    
Sbjct: 64  FMLGLLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTA 123

Query: 184 FIAQHLGFDQYYANRFIEKDDRLTGQVMEPIIDGTAKSQILLEAIQKLQINPED---TIA 240
            IA+  G     A     +D R TG++         K   + + +  + +   D   +  
Sbjct: 124 PIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYF 183

Query: 241 VGDGNNDLDMLRVAGYGVAFHAKPALAKQAKIR 273
             D  ND+ +L      +A +  P L + A+ R
Sbjct: 184 YSDSVNDVPLLEAVTRPIAANPSPGLREIAQAR 216