HHsearch alignment for GI: 254780964 and conserved domain: CHL00185
>CHL00185 ycf59 magnesium-protoporphyrin IX monomethyl ester cyclase; Provisional.
Probab=94.99 E-value=0.091 Score=31.28 Aligned_cols=212 Identities=17% Similarity=0.228 Sum_probs=111.6
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf 8520268998999999999999986433334556664013305--77999999999999997789999999971464699
Q gi|254780964|r 67 LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS--NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE 144 (352)
Q Consensus 67 dw~t~~~Lt~~Ek~~~~~~l~~~~~~D~~v~~~~~~~i~~~~~--~~E~~~~l~~q~~~E~iH~~sYs~il~~l~~~~~e 144 (352)
T Consensus 66 ~~~~---l~~~~r~~FidfL~~SctsE-FSG~lLykEl~rr~k~~nP~l~e~f~~MaRDEaRHAGFlNkam~df~~~lD- 140 (349)
T CHL00185 66 SWSN---LDEKTKQLFIEFLERSCTAE-FSGFLLYKELSRKLKDRNPLLAECFLLMSRDEARHAGFLNKAMADFNLSLD- 140 (349)
T ss_pred HHHH---CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-
T ss_conf 6773---99999999999999876776-012369999998713379079999999876577787889999998495202-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH-HHHHC--CCCCHHH
Q ss_conf 99999720018987788999997401210102677740149999999974000144411478899-89975--9801289
Q gi|254780964|r 145 LFNMYREVPSITAKANWALQYTQTLSSPSFTTGTKDADQEFLQDLFVFYVVFEGMWFYTGFAQIL-SLGRA--NKMVGIA 221 (352)
Q Consensus 145 ~f~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~lEGi~Fys~Fa~~~-~l~~~--g~m~g~~ 221 (352)
T Consensus 141 -------LgfLtk~k~Y----------------TfF~PkfI~Ya----tYLSEKIG-Y~RYItIyRhLe~~Pe~r~~PiF 192 (349)
T CHL00185 141 -------LGFLTKSRKY----------------TFFAPKFIFYA----TYLSEKIG-YWRYITIYRHLEKHPEHRIYPIF 192 (349)
T ss_pred -------HHHHCCCCCE----------------EEECCCEEEHH----HHHHHHHH-HHHHHHHHHHHHHCCCCCCCHHH
T ss_conf -------4765056612----------------65464401135----58776542-67887999998869100226389
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHCCC---CCCCCCHHHHHHHHH
Q ss_conf 99999985666669999999997655375422067-89999999999998768868875188---847999899999999
Q gi|254780964|r 222 EQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKE-FQQKSRTMLHEATLLEIAYAHETMPK---GFVGLNAPSCEQYMQ 297 (352)
Q Consensus 222 ~~i~~I~RDE~lH~~f~~~l~~~l~~E~p~l~~~~-~~~~i~~~~~eave~E~~~~~~~~~~---~~~Gl~~~~~~~yi~ 297 (352)
T Consensus 193 ~~Fe~WCqDE~rHGd~F~~lmr----s~P~ll~g~~~~lw~rFFllaVfa--Tmy~~d~~R~~fy~alGld~~~yD~~Vi 266 (349)
T CHL00185 193 KFFENWCQDENRHGDFFAALLK----SQPHLLNGWKSKLWCRFFLLSVFA--TMYLNDFQRIDFYAAIGLDARQYDMQVI 266 (349)
T ss_pred HHHHHHHCCCHHHHHHHHHHHH----CCHHHHHCHHHHHHHHHHHHHHHH--HEEEECCCCHHHHHHHCCCHHHHHHHHH
T ss_conf 9999984330240799999996----496655054689999999999987--4043103608799986999789709999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 9999999978879889998883
Q gi|254780964|r 298 FIANRRCHQIGLEPLFKYTENP 319 (352)
Q Consensus 298 y~an~rL~~lG~~~~f~~~~nP 319 (352)
T Consensus 267 ~~Tne~s~rv-FP~~Ldv-d~P 286 (349)
T CHL00185 267 RKTNESAARL-FPVVLDV-DNP 286 (349)
T ss_pred HHHHHHHHHH-CCEEECC-CCH
T ss_conf 9961877864-7852348-985