HHsearch alignment for GI: 254780964 and conserved domain: PRK13965

>PRK13965 ribonucleotide-diphosphate reductase subunit beta; Provisional.
Probab=100.00  E-value=0  Score=548.04  Aligned_cols=299  Identities=21%  Similarity=0.268  Sum_probs=264.5

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHH
Q ss_conf             01786167999999999945798703674798998520268998999999999999986433334556664013305779
Q gi|254780964|r   33 QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE  112 (352)
Q Consensus        33 ~l~p~kY~~~~~ly~k~~~~fW~peEi~l~~D~~dw~t~~~Lt~~Ek~~~~~~l~~~~~~D~~v~~~~~~~i~~~~~~~E  112 (352)
T Consensus        28 NWn~~~~~~~~~~w~~~~~nFW~PeEI~ls~D~~dw~~---Ls~~Ek~~~~~iL~~lt~lDs~q~~~~~~~~~~~~~~~e  104 (337)
T PRK13965         28 NWNYLNDDKDLEVWNRVTQNFWLPEKVPVSNDLNSWRS---LGEDWQQLITRTFTGLTLLDTVQATVGDVAQIPHSQTDH  104 (337)
T ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCEECHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHH
T ss_conf             78887658899999999968687700451744999987---999999999999999999999986552176631068799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHH
Q ss_conf             9999999999999778999999997146469--99999972001898778899999740121010267774014999999
Q gi|254780964|r  113 CRQYLLRQAFEEAVHSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQYTQTLSSPSFTTGTKDADQEFLQDLF  190 (352)
Q Consensus       113 ~~~~l~~q~~~E~iH~~sYs~il~~l~~~~~--e~f~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (352)
T Consensus       105 ~~~~l~~~~~~EaIHs~SYS~il~tl~~~~e~~e~f~~~~~~~~l~~k~~~i~~~y~~-------------~-~~~~~~-  169 (337)
T PRK13965        105 EQVIYTNFAFMVGIHARSYGTIFSTLCSSEQIEEAHEWVVSTESLQDRARVLIPYYTG-------------D-DPLKSK-  169 (337)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHC-------------C-CHHHHH-
T ss_conf             9999999999999999999999999669876999999871499999999999988528-------------8-699999-


Q ss_pred             HHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             99740001444114788998997598012899999998566666999999999765537542206789999999999998
Q gi|254780964|r  191 VFYVVFEGMWFYTGFAQILSLGRANKMVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATL  270 (352)
Q Consensus       191 ~~~~~lEGi~Fys~Fa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~E~p~l~~~~~~~~i~~~~~eave  270 (352)
T Consensus       170 vas~~lEGi~FysgFa~~l~l~~~gkM~g~~~ii~~I~RDEslH~~~~~~~~~~~~~~~~~e~~~e~~~~v~~~~~~aVe  249 (337)
T PRK13965        170 VAAAMMPGFLLYGGFYLPFYLSARGKLPNTSDIIRLILRDKVIHNYYSGYKYQQKVARLSPEKQAEMKAFVFDLLYELID  249 (337)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999886698723798878998704888889999999998742987789999999999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-CCHHHHHHHHC--CCCCCCCCCCCCCCCCCCC
Q ss_conf             76886887518884799989999999999999999788798899988-83257899717--8867555766711221058
Q gi|254780964|r  271 LEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEKNFFETRVTEYQQGA  347 (352)
Q Consensus       271 ~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~lG~~~~f~~~~-nP~~W~~~~~~--~~~~tnFFe~~~t~Y~k~~  347 (352)
T Consensus       250 lE~~~~~~~~~~--~gl-~~~l~~YI~YiANrrL~~LGl~~~y~~~~~~~~P~~~~~~~~~~~~~~dFFE~r~t~Y~~g~  326 (337)
T PRK13965        250 LEKAYLRELYAG--FDL-AEDAIRFSLYNAGKFLQNLGYESPFTEEETRVSPEVFAQLSARADENHDFFSGNGSSYVMGI  326 (337)
T ss_pred             HHHHHHHHHHHC--CCH-HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHEE
T ss_conf             999999999836--776-99999999999999999779988899867888814589760478867785477721002100


Q ss_pred             C-CCCC
Q ss_conf             6-7789
Q gi|254780964|r  348 E-LKWD  352 (352)
Q Consensus       348 ~-~~~d  352 (352)
T Consensus       327 ~~~~~d  332 (337)
T PRK13965        327 TEETTD  332 (337)
T ss_pred             CCCCCC
T ss_conf             578823