HHsearch alignment for GI: 254780964 and conserved domain: PRK13965
>PRK13965 ribonucleotide-diphosphate reductase subunit beta; Provisional.
Probab=100.00 E-value=0 Score=548.04 Aligned_cols=299 Identities=21% Similarity=0.268 Sum_probs=264.5
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHH
Q ss_conf 01786167999999999945798703674798998520268998999999999999986433334556664013305779
Q gi|254780964|r 33 QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE 112 (352)
Q Consensus 33 ~l~p~kY~~~~~ly~k~~~~fW~peEi~l~~D~~dw~t~~~Lt~~Ek~~~~~~l~~~~~~D~~v~~~~~~~i~~~~~~~E 112 (352)
T Consensus 28 NWn~~~~~~~~~~w~~~~~nFW~PeEI~ls~D~~dw~~---Ls~~Ek~~~~~iL~~lt~lDs~q~~~~~~~~~~~~~~~e 104 (337)
T PRK13965 28 NWNYLNDDKDLEVWNRVTQNFWLPEKVPVSNDLNSWRS---LGEDWQQLITRTFTGLTLLDTVQATVGDVAQIPHSQTDH 104 (337)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCEECHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHH
T ss_conf 78887658899999999968687700451744999987---999999999999999999999986552176631068799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHH
Q ss_conf 9999999999999778999999997146469--99999972001898778899999740121010267774014999999
Q gi|254780964|r 113 CRQYLLRQAFEEAVHSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQYTQTLSSPSFTTGTKDADQEFLQDLF 190 (352)
Q Consensus 113 ~~~~l~~q~~~E~iH~~sYs~il~~l~~~~~--e~f~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (352)
T Consensus 105 ~~~~l~~~~~~EaIHs~SYS~il~tl~~~~e~~e~f~~~~~~~~l~~k~~~i~~~y~~-------------~-~~~~~~- 169 (337)
T PRK13965 105 EQVIYTNFAFMVGIHARSYGTIFSTLCSSEQIEEAHEWVVSTESLQDRARVLIPYYTG-------------D-DPLKSK- 169 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHC-------------C-CHHHHH-
T ss_conf 9999999999999999999999999669876999999871499999999999988528-------------8-699999-
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99740001444114788998997598012899999998566666999999999765537542206789999999999998
Q gi|254780964|r 191 VFYVVFEGMWFYTGFAQILSLGRANKMVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATL 270 (352)
Q Consensus 191 ~~~~~lEGi~Fys~Fa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~E~p~l~~~~~~~~i~~~~~eave 270 (352)
T Consensus 170 vas~~lEGi~FysgFa~~l~l~~~gkM~g~~~ii~~I~RDEslH~~~~~~~~~~~~~~~~~e~~~e~~~~v~~~~~~aVe 249 (337)
T PRK13965 170 VAAAMMPGFLLYGGFYLPFYLSARGKLPNTSDIIRLILRDKVIHNYYSGYKYQQKVARLSPEKQAEMKAFVFDLLYELID 249 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999886698723798878998704888889999999998742987789999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-CCHHHHHHHHC--CCCCCCCCCCCCCCCCCCC
Q ss_conf 76886887518884799989999999999999999788798899988-83257899717--8867555766711221058
Q gi|254780964|r 271 LEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEKNFFETRVTEYQQGA 347 (352)
Q Consensus 271 ~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~lG~~~~f~~~~-nP~~W~~~~~~--~~~~tnFFe~~~t~Y~k~~ 347 (352)
T Consensus 250 lE~~~~~~~~~~--~gl-~~~l~~YI~YiANrrL~~LGl~~~y~~~~~~~~P~~~~~~~~~~~~~~dFFE~r~t~Y~~g~ 326 (337)
T PRK13965 250 LEKAYLRELYAG--FDL-AEDAIRFSLYNAGKFLQNLGYESPFTEEETRVSPEVFAQLSARADENHDFFSGNGSSYVMGI 326 (337)
T ss_pred HHHHHHHHHHHC--CCH-HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHEE
T ss_conf 999999999836--776-99999999999999999779988899867888814589760478867785477721002100
Q ss_pred C-CCCC
Q ss_conf 6-7789
Q gi|254780964|r 348 E-LKWD 352 (352)
Q Consensus 348 ~-~~~d 352 (352)
T Consensus 327 ~~~~~d 332 (337)
T PRK13965 327 TEETTD 332 (337)
T ss_pred CCCCCC
T ss_conf 578823