HHsearch alignment for GI: 254780964 and conserved domain: cd07911

>cd07911 RNRR2_Rv0233_like Ribonucleotide Reductase R2-like protein, ferritin-like diiron-binding domain. Rv0233 is a Mycobacterium tuberculosis ribonucleotide reductase R2 protein with a heterodinuclear manganese/iron-carboxylate cofactor located in its metal center. The Rv0233-like family may represent a structural/functional counterpart of the evolutionary ancestor of the RNRR2's (Ribonucleotide Reductase, R2/beta subunit) and the bacterial multicomponent monooxygenases. RNRR2s belong to a broad superfamily of ferritin-like diiron-carboxylate proteins. The RNR protein catalyzes the conversion of ribonucleotides to deoxyribonucleotides and is found in prokaryotes and archaea. The catalytically active form of RNR is a proposed alpha2-beta2 tetramer. The homodimeric alpha subunit (R1) contains the active site and redox active cysteines as well as the allosteric binding sites.
Probab=100.00  E-value=0  Score=384.88  Aligned_cols=253  Identities=19%  Similarity=0.259  Sum_probs=215.3

Q ss_pred             HHHHHHHHHC-CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CHHCCCHHHHHHHHH
Q ss_conf             9999999945-7987036747989985202689989999999999999864333345566640--133057799999999
Q gi|254780964|r   43 WEKYLSACNN-HWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI--YRHLSNPECRQYLLR  119 (352)
Q Consensus        43 ~~ly~k~~~~-fW~peEi~l~~D~~dw~t~~~Lt~~Ek~~~~~~l~~~~~~D~~v~~~~~~~i--~~~~~~~E~~~~l~~  119 (352)
T Consensus        10 ~~l~~~~~~~nFW~PeEId~s~D~~dW~~---Lt~~Er~~i~~ila~F~~~d~~V~~nl~~~~~~~~~~~~~e~~~~l~~   86 (280)
T cd07911          10 MKLFEKGKRKGFWNPADIDFSQDREDWEQ---LSEEERDLALRLCAGFIAGEEAVTLDLLPLMMAMAAEGRLEEEMYLTQ   86 (280)
T ss_pred             HHHHHHHHCCCCCCHHHCCCCCHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             89999764038998477086013888856---999999999999999998588999879999988520375899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             999999778999999997146469--999999720018987788999997401210102677740149999999974000
Q gi|254780964|r  120 QAFEEAVHSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQYTQTLSSPSFTTGTKDADQEFLQDLFVFYVVFE  197 (352)
Q Consensus       120 q~~~E~iH~~sYs~il~~l~~~~~--e~f~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~lE  197 (352)
T Consensus        87 q~~eEaiH~~sYs~~~~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~ilE  155 (280)
T cd07911          87 FLFEEAKHTDFFRRWLDAVGVSDDLSDLHTAVYREPFYEALPYAELR-----------LYLDASPAAQVRASVTYNMIVE  155 (280)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH-----------HCCCCCHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999846756588885689872899999999997-----------5379988999999999999999


Q ss_pred             HHHHHHHHHHHH-HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             144411478899-8997598012899999998566666999999999765537542206789999999999998768868
Q gi|254780964|r  198 GMWFYTGFAQIL-SLGRANKMVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA  276 (352)
Q Consensus       198 Gi~Fys~Fa~~~-~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~E~p~l~~~~~~~~i~~~~~eave~E~~~~  276 (352)
T Consensus       156 Gi~f~sGf~a~~~~~~~rg~m~G~~~~i~~I~RDE~~H~~fg~~l~~~l~~e~p~~~-d~~~e~~~el~~~av~~~-~~~  233 (280)
T cd07911         156 GVLAETGYYAWRTICEKRGILPGMQEGIRRLGDDESRHIAWGTFTCRRLVAADDANW-DVFEERMNELVPHALGLI-DEI  233 (280)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH-HHHHHHHHHHHHHHHHHH-HHH
T ss_conf             999999999999999857988778999999998899999999999999998695678-999999999999999999-999


Q ss_pred             HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             87518884799989999999999999999788798
Q gi|254780964|r  277 HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEP  311 (352)
Q Consensus       277 ~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~lG~~~  311 (352)
T Consensus       234 ~~~~~~~~~g~~~~~f~~Y~~~~a~~rLg~i~~~~  268 (280)
T cd07911         234 FELYDEMPFGLDPDELMQYAVDQFQRRLGYIERAR  268 (280)
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             85156556688999999999999998744887852