HHsearch results for GI: 254780964 and protein with PDBid: 1vjx_A
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein TM1526; structural genomics, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=91.87 E-value=0.49 Score=24.75 Aligned_cols=140 Identities=14% Similarity=0.099 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999864333345566640133057799999999999999778999999997146469999999720018987788
Q gi|254780964|r 82 IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANW 161 (352)
Q Consensus 82 ~~~~l~~~~~~D~~v~~~~~~~i~~~~~~~E~~~~l~~q~~~E~iH~~sYs~il~~l~~~~~e~f~~~~~~~~i~~k~~~ 161 (352)
++-+|.....++......+. .+...+ .|+++.++...+-+|.-|.+.+..++..++.++... .....+......
T Consensus 15 ~~e~l~~Ai~~E~~~~~~Y~-~~a~~~-~~~~~~~f~~la~eE~~H~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~-- 88 (157)
T 1vjx_A 15 VSDILTVAIRLEEEGERFYR-ELSEHF-NGEIKKTFLELADQERIHAEIFRKMSDQENWDEVDS--YLAGYAFYEVFP-- 88 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHTTSC-CSHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTC--BCCSBCCCCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH--HHHHHHHHHHHH--
T ss_conf 99999999999999999999-999767-899999999999999999999999998617985427--777764222367--
Q ss_pred HHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999740121010267774014999999997400014441147889989975980128999999985666669999999
Q gi|254780964|r 162 ALQYTQTLSSPSFTTGTKDADQEFLQDLFVFYVVFEGMWFYTGFAQILSLGRANKMVGIAEQYQYIMRDESLHLNFGIDV 241 (352)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~lEGi~Fys~Fa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l 241 (352)
...........+....+...+. .-..++-||..+ ...-.=|.+.+++..|+.||..|......+
T Consensus 89 --------~~~~~~~~~~~~~~~~l~~ai~--~E~~a~~~Y~~l------~~~~~d~~~r~~~~~l~~eE~~H~~~l~~l 152 (157)
T 1vjx_A 89 --------DTSEILRRKDLTLKEVLDIAIS--VEKDSIILYYEL------KDGLVNSDAQKTVKKIIDQEKEHLRKLLEM 152 (157)
T ss_dssp --------CCTTGGGCSCCCHHHHHHHHHH--HHHHHHHHHHHH------HHHCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------HHHHHHCCCCCCHHHHHHHHHH--HHHHHHHHHHHH------HHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf --------7777751478889999999998--388899999999------987799999999999999999999999999
Q ss_pred HH
Q ss_conf 99
Q gi|254780964|r 242 IN 243 (352)
Q Consensus 242 ~~ 243 (352)
.+
T Consensus 153 ~~ 154 (157)
T 1vjx_A 153 KR 154 (157)
T ss_dssp HH
T ss_pred HH
T ss_conf 87