HHsearch results for GI: 254780964 and protein with PDBid: 2rcc_A
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=0 Score=599.35 Aligned_cols=337 Identities=26% Similarity=0.474 Sum_probs=305.2
Q ss_pred CCCCCCCCHHCCCCCCCCHHHCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHH
Q ss_conf 98543641000654578813374868899-80001786167999999999945798703674798998520268998999
Q gi|254780964|r 1 MANNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79 (352)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~p~kY~~~~~ly~k~~~~fW~peEi~l~~D~~dw~t~~~Lt~~Ek 79 (352)
|++.... +++++++.. .+++|++|++ +..+++|+||||+|++|++++++||+|+|||+++|++||++ ||++||
T Consensus 2 ~~~~~~~-~i~~~~~~n--~~~~i~~g~~~~~~~~~~ikY~~~~~~y~k~~~~fW~peEi~ls~D~~dw~~---Lt~~Er 75 (346)
T 2rcc_A 2 MEQLQKR-KIYDTTASN--ASTGILNGKSSNVLNWDDVRFSWAYPLYKNMLANFWTPFEINMSHDAKQFPT---LTETEQ 75 (346)
T ss_dssp CCCCCCC-CSCCTTSCS--SCSCSBSCCCCSCCCTTSCSBTTHHHHHHHHHHTCCCGGGSCCHHHHHHGGG---SCHHHH
T ss_pred CCHHCCC-CCCCCCCCC--CCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH---CCHHHH
T ss_conf 1110335-678999987--6688507997642324444768999999999877999423150410899987---999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHH
Q ss_conf 999999999986433334556664013305779999999999999977899999999714646--999999972001898
Q gi|254780964|r 80 LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITA 157 (352)
Q Consensus 80 ~~~~~~l~~~~~~D~~v~~~~~~~i~~~~~~~E~~~~l~~q~~~E~iH~~sYs~il~~l~~~~--~e~f~~~~~~~~i~~ 157 (352)
++++++|++|+++|++|++.+ ..+.+.++.||+++++++|+++|+||+++||++++++++++ +++|+++.++|.+++
T Consensus 76 ~~~~~iL~~f~~~D~~~~~~~-~~~~~~~~~~E~~~~~~~~~~~E~iH~~sYs~il~~l~~~~~~~e~~~~~~~~~~i~~ 154 (346)
T 2rcc_A 76 EAFKKIIGLLAFLDSVQTDYS-MRAAEYLTDSSLAALMSVLSFQEVVHNQSYSYVLSSLVPKATQDEIFEYWKHDDVLKE 154 (346)
T ss_dssp HHHHHHHHHHHHTTTTCCCHH-HHHHTTBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 999999999999887752458-9999865699999999999999999999999999986477017999999987799998
Q ss_pred HHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 77889999974012101026777401499999999740001444114788998997598012899999998566666999
Q gi|254780964|r 158 KANWALQYTQTLSSPSFTTGTKDADQEFLQDLFVFYVVFEGMWFYTGFAQILSLGRANKMVGIAEQYQYIMRDESLHLNF 237 (352)
Q Consensus 158 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~lEGi~Fys~Fa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f 237 (352)
|++|+.++++.... .+.++.+++++ ++++++|||+|||||+++++|+++|+|+|++++|++|+|||++|+.|
T Consensus 155 k~~~~~~~~~~~~~-------~~~~~~~~~~l-v~~~~lEGi~f~ssFa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~~ 226 (346)
T 2rcc_A 155 RNEFIIDGYEKFVD-------NPTPKTFLESI-VYDVILEGLNFYSGFAFFYNLARNQKMVSTSTMINYINRDEQLHVYL 226 (346)
T ss_dssp HHHHHHHHHHHHHH-------SCCHHHHHHHH-HHHHHHHHTTTHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-------CCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 77899999875510-------24578999999-99999889999988999999987088987899999998437688999
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC-C
Q ss_conf 999999765537542206789999999999998768868875188847999899999999999999997887988999-8
Q gi|254780964|r 238 GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-T 316 (352)
Q Consensus 238 ~~~l~~~l~~E~p~l~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~lG~~~~f~~-~ 316 (352)
++.+++++++|+|+++++++.+++++++++||++|++|++++++.+++|||++++++||+|+||+||.+||++++|+. .
T Consensus 227 ~~~l~~~l~~e~~~~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~e~~~~yi~y~an~~L~~lG~~~~f~~~~ 306 (346)
T 2rcc_A 227 FTNIFKELLVEFPELNTEETKTFVKTTLMKAADLEKDWFRYIIGDKIPGINPEDMETYISFIANKRAVQLGMEKPYPEIK 306 (346)
T ss_dssp HHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSTTCCHHHHHHHHHHHHHHHHHHTTCCCSCTTCC
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999998762661025678999999999999999999999818776888899999999999999999779999998777
Q ss_pred CCCHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCC-CCC
Q ss_conf 883257899717886-755576671122105867-789
Q gi|254780964|r 317 ENPFPWMSEVIDLKK-EKNFFETRVTEYQQGAEL-KWD 352 (352)
Q Consensus 317 ~nP~~W~~~~~~~~~-~tnFFe~~~t~Y~k~~~~-~~d 352 (352)
+||+|||++..++++ ++||||+|+|+|+|++.. +||
T Consensus 307 ~nP~~w~~~~~~~~~~~~nFFE~~~t~Y~k~~~~~~~D 344 (346)
T 2rcc_A 307 HNPMKWIRAYEDVNSGKSDFFEQKSRQYAKVSADNGFD 344 (346)
T ss_dssp SCSCTTC-------------------------------
T ss_pred CCCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCC
T ss_conf 89588999864347652588889778753267778866