HHsearch results for GI: 254780964 and protein with PDBid: 3ee4_A
>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, cavity, monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis}
Probab=100.00 E-value=0 Score=411.58 Aligned_cols=293 Identities=19% Similarity=0.271 Sum_probs=244.2
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 8688998000178616799999999994579870367479899852026899899999999999998643333455666-
Q gi|254780964|r 24 MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL- 102 (352)
Q Consensus 24 ~~~~~~~~~~l~p~kY~~~~~ly~k~~~~fW~peEi~l~~D~~dw~t~~~Lt~~Ek~~~~~~l~~~~~~D~~v~~~~~~- 102 (352)
+..|.-||+. +| +.+|+|++++||+|+|||+++|+.||++ ||+.||++++++|++|+.+|++|++++..
T Consensus 18 ~~~~g~nw~~-~~------~~ly~k~~~~fW~p~Eidls~D~~dw~~---Ls~~Er~~~~~iL~~f~~~D~~v~~~l~~l 87 (323)
T 3ee4_A 18 LAAGGLNWAS-LP------LKLFAGGNAKFWHPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEEAVTEDIQPF 87 (323)
T ss_dssp GSTTCCCTTS-HH------HHHHHHHHHTCCCGGGSCCTTHHHHHHH---SCHHHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHCCCCCCCC-CH------HHHHHHHHHCCCCHHHCCCHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5406878020-28------9999999873998352780734999987---999999999999999999999999549999
Q ss_pred -HCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCHHHCCCCC
Q ss_conf -401330577999999999999997789999999971464699999997200189877889999-974012101026777
Q gi|254780964|r 103 -AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQY-TQTLSSPSFTTGTKD 180 (352)
Q Consensus 103 -~i~~~~~~~E~~~~l~~q~~~E~iH~~sYs~il~~l~~~~~e~f~~~~~~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~ 180 (352)
.+.+.++.||+++|+++|+++|+||++|||++++++++++ ++++++.+.|.++.|..+.... +..+ ...+
T Consensus 88 ~~~~~~~~~~e~~~~~~~q~~~EaiH~esYs~il~tl~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~ 159 (323)
T 3ee4_A 88 MSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISE-DLHRYLDDLPAYRQIFYAELPECLNAL-------SADP 159 (323)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCS-CCGGGGTTCHHHHHHHHTHHHHHHHHH-------HHCC
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHCHHHHHHHHHHHHHHHHHH-------CCCC
T ss_conf 98720058599999999999999879999999999855498-888875204899999999999999874-------3699
Q ss_pred CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
Q ss_conf 401499999999740001444114788998997-5980128999999985666669999999997655375422067899
Q gi|254780964|r 181 ADQEFLQDLFVFYVVFEGMWFYTGFAQILSLGR-ANKMVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQ 259 (352)
Q Consensus 181 ~~~~~~~~~i~~~~~lEGi~Fys~Fa~~~~l~~-~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~E~p~l~~~~~~~ 259 (352)
.++.++++++++++++|||+|||||+++++|.+ +|+|||++++|++|+|||++|+.||+.+++.+++|+|++++ .+++
T Consensus 160 ~~~~~~~~lv~~~~ilEGi~f~sgF~~~~~~~~~~g~m~g~~~~i~~I~RDE~~H~~fg~~l~~~l~~e~p~~~~-~~~~ 238 (323)
T 3ee4_A 160 SPAAQVRASVTYNHIVEGMLALTGYYAWHKICVERAILPGMQELVRRIGDDERRHMAWGTFTCRRHVAADDANWT-VFET 238 (323)
T ss_dssp CHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH-HHHH
T ss_conf 889999999999999879999889999999988668883299999999966999999999999999874930448-9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCC-CCCCCC
Q ss_conf 9999999999876886887518884799989999999999999999788798899988832578997178867-555766
Q gi|254780964|r 260 KSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFET 338 (352)
Q Consensus 260 ~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~lG~~~~f~~~~nP~~W~~~~~~~~~~-tnFFe~ 338 (352)
++++++.+|+++|.++.....+..++|++.+ +||+|+||++|++||.-+ ....+|++|++-..+.... ..|.+.
T Consensus 239 ~i~el~~~a~e~e~~~~~~~~~~~~~gl~~e---~yv~Yvad~~l~~LG~i~--~a~~~p~~~~d~~~~p~~l~~~f~~~ 313 (323)
T 3ee4_A 239 RMNELIPLALRLIEEGFALYGDQPPFDLSKD---DFLQYSTDKGMRRFGTIS--NARGRPVAEIDVDYSPAQLEDTFADE 313 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTCCSTTCCHH---HHHHHHHHHHHHHHHHHH--TTTTCCGGGTCC--------------
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH---HHHHHHHHHHHHHCCCCC--CCCCCCHHHCCCCCCHHHHHHHHHHH
T ss_conf 9999999999999999987077766799999---999999999998779931--24469977657778979999999999
Q ss_pred CC
Q ss_conf 71
Q gi|254780964|r 339 RV 340 (352)
Q Consensus 339 ~~ 340 (352)
..
T Consensus 314 ~~ 315 (323)
T 3ee4_A 314 DR 315 (323)
T ss_dssp --
T ss_pred HH
T ss_conf 99