HHsearch alignment for GI: 254780967 and conserved domain: COG2270
>COG2270 Permeases of the major facilitator superfamily [General function prediction only].
Probab=99.81 E-value=6.3e-17 Score=109.82 Aligned_cols=347 Identities=14% Similarity=0.119 Sum_probs=204.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHCCCC--HHH-HCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 9999999999999999999986508289999-999999999998510011--011-100223210011111110001233
Q gi|254780967|r 42 HLISFYLIGYGIAQIFYGPLSDRFGRKIVMM-FGLVIHIISTFIMVTINS--FTG-MLCMRLIQGIGGAAPRIITISIIR 117 (398)
Q Consensus 42 ~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~-~g~~~~~i~~~~~~~a~~--~~~-l~~~r~l~G~g~~~~~~~~~a~i~ 117 (398)
T Consensus 62 y~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~ 141 (438)
T COG2270 62 YASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLP 141 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHEEHHHHHH
T ss_conf 99899999999999886466515787205889999999999999998089865999999999998730023300666765
Q ss_pred HHHCCCCCCCCCCCCCCEECCCCCCCCCC------CC----C-CC------CCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 21000111122122331000111111111------12----2-22------11111101456788888777788876167
Q gi|254780967|r 118 DIYDGRDMAKVLSIAMMIFMIMPILAPSI------GQ----A-TV------ALSGGWIGIFVCMGVITTFITLWYYIRFP 180 (398)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~g~~igp~i------g~----~-l~------~~~~gWr~~f~~~~~~~~~~~~~~~~~~p 180 (398)
T Consensus 142 ~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~ 221 (438)
T COG2270 142 RLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVH 221 (438)
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 40575655740233501364322099999999996065446057762367555643215778999999999808885166
Q ss_pred CCCC----HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHH-HHHHHHH
Q ss_conf 8864----0221011111123331000000000256777887631001468887654554315311015889-9886576
Q gi|254780967|r 181 ETLD----PRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAF-AVGGFAM 255 (398)
Q Consensus 181 et~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 255 (398)
T Consensus 222 ~~~~~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA 301 (438)
T COG2270 222 DAEKISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVA 301 (438)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 51224565417899999999999999962464499999999998239999999999988872812889999999999999
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q ss_conf 77889999985001565124688778889999999987325777640379989989999999999999999985346-67
Q gi|254780967|r 256 SIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HL 334 (398)
Q Consensus 256 ~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 334 (398)
T Consensus 302 ~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~----~~---~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k 374 (438)
T COG2270 302 ALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE----GE---LDFWILGLLVGTSLGGAQASSRSYLARLVPKGK 374 (438)
T ss_pred HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCC----CC---HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
T ss_conf 98889999999770884260489999999999999756----60---999999999998402188888999998689852
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 69999999999999999999999999831179999999999999999999994220003430
Q gi|254780967|r 335 AGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFRKTE 396 (398)
Q Consensus 335 ~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 396 (398)
T Consensus 375 ~~~fFglyaltgra~S~~gp~lv~v~t~iTg~-~r~g~~~i~vll~iGl~~L~~v~~~~~~~ 435 (438)
T COG2270 375 EGRFFGLYALTGRAASFLGPFLVAVITQITGS-SRAGVLSIIVLLLIGLLLLLRVKVPGRRE 435 (438)
T ss_pred CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHEEEECCCCCCC
T ss_conf 13131025441138999999999999987154-01289999999986176279603788765