HHsearch alignment for GI: 254780967 and conserved domain: PRK10077
>PRK10077 xylE D-xylose transporter XylE; Provisional.
Probab=100.00 E-value=7.9e-34 Score=202.99 Aligned_cols=353 Identities=15% Similarity=0.159 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHHHH--HHHH--HHHHHHHHHHHHH----CCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf 38999999999988--6576--6999999999981----99988---999999999999999999999999865082899
Q gi|254780967|r 2 EFVIVIAMLMAINS--LGID--IILPCLPKISDSL----HLSNE---NYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIV 70 (398)
Q Consensus 2 ~~i~~l~~~~~~~~--~~~~--~~~p~lp~i~~~l----~~s~~---~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~ 70 (398)
T Consensus 8 ~~~~~~~~~a~lg~~~fGYd~~~is~~~~~~~~~~~~~~~~~~~~~~~~~g~i~s~~~iG~~iGal~~g~l~Dr~GRk~~ 87 (486)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSSRFGRRDS 87 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf 99999999999999999983716846899899984366678853057899999999999999999999999877455999
Q ss_pred HHHHHHHHHHHHHHHH------------------CCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
Q ss_conf 9999999999999851------------------0011011100223210011111110001233210001111221223
Q gi|254780967|r 71 MMFGLVIHIISTFIMV------------------TINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIA 132 (398)
Q Consensus 71 l~~g~~~~~i~~~~~~------------------~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~ 132 (398)
T Consensus 88 l~~~~~~~~i~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~R~i~G~g~G~~~~~~p~yisE~ap~~~RG~~~~~~ 167 (486)
T PRK10077 88 LKIAAVLFFISAVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFN 167 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 99999999999999876655555303125788888757999999999998559878889999999848786741475699
Q ss_pred CCEECCCCCCCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH-----HHCC----------
Q ss_conf 31000111111111122221-------1111101456788888777788876167886402-----2101----------
Q gi|254780967|r 133 MMIFMIMPILAPSIGQATVA-------LSGGWIGIFVCMGVITTFITLWYYIRFPETLDPR-----DVRP---------- 190 (398)
Q Consensus 133 ~~~~~~g~~igp~ig~~l~~-------~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~-----~~~~---------- 190 (398)
T Consensus 168 ~~~~~~G~l~~~~v~~~~~~~~~~~~~~~~~WR~~~~~~~ipa~~~~~-~~~~lPESPrwL~~kgr~eeA~~~l~~l~~~ 246 (486)
T PRK10077 168 QFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASECIPALLFLM-LLYFVPESPRWLMSRGKQEQAESILRKIMGN 246 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHCCCCCHHHHHCCCHHHHHHHHHHHHCC
T ss_conf 999999999999999998607872125773389999989999999999-9996786709999869999999999998398
Q ss_pred CCCCCCC-----------CCCCCCCCCCH---HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHH-HHHHHHHHH
Q ss_conf 1111123-----------33100000000---02567778876310014688876545543153110158-899886576
Q gi|254780967|r 191 LNLYAIL-----------HSFSLIFKHRA---STLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPI-AFAVGGFAM 255 (398)
Q Consensus 191 ~~~~~~~-----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 255 (398)
T Consensus 247 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~q~~Gi~~i~~y~~~i~~~~g-~~~~~~~~~~~~~~~~~ 325 (486)
T PRK10077 247 TLATQALQEIKHSLDHGRKTGGRLLMFGVGVIVIGVLLSVFQQFVGINVVLYYAPEIFKTLG-ASTDIALLQTIIVGVIN 325 (486)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHH
T ss_conf 30789999999999998875447775142999999999999999815459963999999839-98746999999999988
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q ss_conf 77889999985001565124688778889999999987325777640379989989999999999999999985346-67
Q gi|254780967|r 256 SIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HL 334 (398)
Q Consensus 256 ~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 334 (398)
T Consensus 326 ~~~~~~~~~lvdr~GRR~lli~g~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~f~~~-~gp~~~~~~sEifPt~i 403 (486)
T PRK10077 326 LTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT-QAPGIVALLSMLFYVAAFAMS-WGPVCWVLLSEIFPNAI 403 (486)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCHHH
T ss_conf 7799999998725387799999999999999999999885-314189999999999999987-98998842384166607
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 699999999999999999999999
Q gi|254780967|r 335 AGTASSIFGFINTVISTILGIIIG 358 (398)
Q Consensus 335 ~G~a~~l~~~~~~~~~~~~~~~~g 358 (398)
T Consensus 404 R~~g~~i~~~~~~~~~~iv~~~~p 427 (486)
T PRK10077 404 RGKALAIAVAAQWIANYFVSWTFP 427 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999