HHsearch alignment for GI: 254780967 and conserved domain: TIGR00889

>TIGR00889 2A0110 nucleoside transporter; InterPro: IPR004740 This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease (NupG) and xanthosine permease (XapB) from Escherichia coli.; GO: 0005337 nucleoside transmembrane transporter activity, 0015858 nucleoside transport, 0016021 integral to membrane.
Probab=98.46  E-value=1.8e-07  Score=57.66  Aligned_cols=165  Identities=13%  Similarity=0.115  Sum_probs=118.3

Q ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC--CC---HHHHCCCCCC
Q ss_conf             999998199988999999999999999999999999865082899999999999999985100--11---0111002232
Q gi|254780967|r   26 PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI--NS---FTGMLCMRLI  100 (398)
Q Consensus        26 p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a--~~---~~~l~~~r~l  100 (398)
T Consensus       249 P~FA~SF~vk~asi-~m--s~sQ~sE~~FiLtiPFFlkRfGIK~V~l~s~Vaw~lRfgfF~YGsdp~~fg~~LL~Ls~iv  325 (435)
T TIGR00889       249 PEFADSFVVKNASI-LM--SLSQFSEILFILTIPFFLKRFGIKKVLLLSLVAWALRFGFFAYGSDPEYFGYVLLLLSMIV  325 (435)
T ss_pred             CCCCCHHHHHCCHH-HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHH
T ss_conf             86201123213288-77--4889999999985225531344789999999999998765030789854899999999999


Q ss_pred             CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC-CEECCCCCCCCCCCCCCCCC-----------CCCCCHHHHHHHHHH
Q ss_conf             100111111100012332100011112212233-10001111111111222211-----------111101456788888
Q gi|254780967|r  101 QGIGGAAPRIITISIIRDIYDGRDMAKVLSIAM-MIFMIMPILAPSIGQATVAL-----------SGGWIGIFVCMGVIT  168 (398)
Q Consensus       101 ~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~-~~~~~g~~igp~ig~~l~~~-----------~~gWr~~f~~~~~~~  168 (398)
T Consensus       326 yG~afDFfnisgsvfVek~v~~~iRasAQGl~~~~~~GfG~~lG~~lsG~~ve~~~~~gePvnGL~~dW~t~Wl~fAgy~  405 (435)
T TIGR00889       326 YGCAFDFFNISGSVFVEKEVPVAIRASAQGLFLLMVNGFGSLLGYILSGVVVEKYFADGEPVNGLVFDWQTVWLVFAGYI  405 (435)
T ss_pred             HHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHH
T ss_conf             86544103445789960027866667888999999701777775445636664331278744541405513678999999


Q ss_pred             HHHHHHHHHHCCCCCCHHHHCCCCC
Q ss_conf             7777888761678864022101111
Q gi|254780967|r  169 TFITLWYYIRFPETLDPRDVRPLNL  193 (398)
Q Consensus       169 ~~~~~~~~~~~pet~~~~~~~~~~~  193 (398)
T Consensus       406 ~~lAv~Fm~~Fky~~~eit~~k~~~  430 (435)
T TIGR00889       406 VILAVLFMIFFKYSHNEITAIKVDD  430 (435)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             9999999876302566400023576