HHsearch alignment for GI: 254780967 and conserved domain: TIGR00889
>TIGR00889 2A0110 nucleoside transporter; InterPro: IPR004740 This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease (NupG) and xanthosine permease (XapB) from Escherichia coli.; GO: 0005337 nucleoside transmembrane transporter activity, 0015858 nucleoside transport, 0016021 integral to membrane.
Probab=98.46 E-value=1.8e-07 Score=57.66 Aligned_cols=165 Identities=13% Similarity=0.115 Sum_probs=118.3
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC--CC---HHHHCCCCCC
Q ss_conf 999998199988999999999999999999999999865082899999999999999985100--11---0111002232
Q gi|254780967|r 26 PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI--NS---FTGMLCMRLI 100 (398)
Q Consensus 26 p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a--~~---~~~l~~~r~l 100 (398)
T Consensus 249 P~FA~SF~vk~asi-~m--s~sQ~sE~~FiLtiPFFlkRfGIK~V~l~s~Vaw~lRfgfF~YGsdp~~fg~~LL~Ls~iv 325 (435)
T TIGR00889 249 PEFADSFVVKNASI-LM--SLSQFSEILFILTIPFFLKRFGIKKVLLLSLVAWALRFGFFAYGSDPEYFGYVLLLLSMIV 325 (435)
T ss_pred CCCCCHHHHHCCHH-HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHH
T ss_conf 86201123213288-77--4889999999985225531344789999999999998765030789854899999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC-CEECCCCCCCCCCCCCCCCC-----------CCCCCHHHHHHHHHH
Q ss_conf 100111111100012332100011112212233-10001111111111222211-----------111101456788888
Q gi|254780967|r 101 QGIGGAAPRIITISIIRDIYDGRDMAKVLSIAM-MIFMIMPILAPSIGQATVAL-----------SGGWIGIFVCMGVIT 168 (398)
Q Consensus 101 ~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~-~~~~~g~~igp~ig~~l~~~-----------~~gWr~~f~~~~~~~ 168 (398)
T Consensus 326 yG~afDFfnisgsvfVek~v~~~iRasAQGl~~~~~~GfG~~lG~~lsG~~ve~~~~~gePvnGL~~dW~t~Wl~fAgy~ 405 (435)
T TIGR00889 326 YGCAFDFFNISGSVFVEKEVPVAIRASAQGLFLLMVNGFGSLLGYILSGVVVEKYFADGEPVNGLVFDWQTVWLVFAGYI 405 (435)
T ss_pred HHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHH
T ss_conf 86544103445789960027866667888999999701777775445636664331278744541405513678999999
Q ss_pred HHHHHHHHHHCCCCCCHHHHCCCCC
Q ss_conf 7777888761678864022101111
Q gi|254780967|r 169 TFITLWYYIRFPETLDPRDVRPLNL 193 (398)
Q Consensus 169 ~~~~~~~~~~~pet~~~~~~~~~~~ 193 (398)
T Consensus 406 ~~lAv~Fm~~Fky~~~eit~~k~~~ 430 (435)
T TIGR00889 406 VILAVLFMIFFKYSHNEITAIKVDD 430 (435)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 9999999876302566400023576