HHsearch alignment for GI: 254780967 and conserved domain: TIGR02332
>TIGR02332 HpaX 4-hydroxyphenylacetate permease; InterPro: IPR012707 Among the different families of transporter only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients , . This entry represents a group of MFS proteins encoded in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterised as 4-HPA permease in Escherichia coli, where 3-HPA and 3,4-dihydroxyphenylacetate, but not other substrate analogues, were shown to competitively inhibit 4-HPA transport, indicating a narrow substrate specificity ..
Probab=99.88 E-value=8.9e-22 Score=136.57 Aligned_cols=332 Identities=16% Similarity=0.169 Sum_probs=237.5
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
Q ss_conf 99999819998899999999999999999999999986508289999999999999998510011011100223210011
Q gi|254780967|r 26 PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGG 105 (398)
Q Consensus 26 p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~ 105 (398)
T Consensus 32 ltmG~dlGl~~tmfG-la~tlfy~~yv~~GiPsn~ml~~~GarrWia~imv~WGiast~tmfat~P~~ly~lr~lvGi~e 110 (412)
T TIGR02332 32 LTMGKDLGLSATMFG-LAATLFYVAYVIFGIPSNIMLAKVGARRWIATIMVLWGIASTATMFATSPESLYLLRILVGIAE 110 (412)
T ss_pred HHHCCHHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 221001003688999-9999999999986262789998863578988999987567665543057417888999987642
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 1111100012332100011112212233100011111111112222111-----11101456788888777788876167
Q gi|254780967|r 106 AAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS-----GGWIGIFVCMGVITTFITLWYYIRFP 180 (398)
Q Consensus 106 ~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~-----~gWr~~f~~~~~~~~~~~~~~~~~~p 180 (398)
T Consensus 111 aGflPGil~ylt~WfPay~raranalfm~amPvt~~lG~i~sGyil~ldG~~~lkGWqWlflleG~Psv~lGv~~Wf~l~ 190 (412)
T TIGR02332 111 AGFLPGILLYLTFWFPAYFRARANALFMVAMPVTTALGLILSGYILALDGLMALKGWQWLFLLEGLPSVLLGVVVWFYLD 190 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
T ss_conf 00225799999986346777677788788878999988898779999877876201467777722168998988876404
Q ss_pred CCCCHHHHCCCCCCCC--------------------------CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 8864022101111112--------------------------33310000000002567778876310014688876545
Q gi|254780967|r 181 ETLDPRDVRPLNLYAI--------------------------LHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIY 234 (398)
Q Consensus 181 et~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (398)
T Consensus 191 d~Pd~a~Wl~~~~k~~l~~m~~~~~l~l~~p~ga~~h~~~~~rs~~re~~-tP~~m~ytlayfCltntlsai~iWtPqil 269 (412)
T TIGR02332 191 DSPDKAKWLDKEEKKALKEMIDRERLTLVSPEGAIAHAAVQQRSTLREVL-TPVVMLYTLAYFCLTNTLSAISIWTPQIL 269 (412)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88503354105678999999742022121430245565566556788987-78999999999998766766643124788
Q ss_pred HHHCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 54315311--0158899886576778899999850015651246887788899999999873257776403799899899
Q gi|254780967|r 235 VGIYQLGN--LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLA 312 (398)
Q Consensus 235 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (398)
T Consensus 270 qsfn~Gssni~iGllaa~Pq~Cti~Gm~~Wsr~sdr~~er~~ht--~lPylfaaaGWllasatdh~~iq~-~~iimas~G 346 (412)
T TIGR02332 270 QSFNTGSSNITIGLLAAVPQICTILGMVYWSRRSDRLKERKKHT--ILPYLFAAAGWLLASATDHSLIQL-LSIIMASTG 346 (412)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCC
T ss_conf 87404632678889976778999987787410034566544310--136899888888875300469999-999986200
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999998534-6676999999999999999999999999983117
Q gi|254780967|r 313 SFQFGLINSNFSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIGQSFNGTT 365 (398)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~ 365 (398)
T Consensus 347 sf~am~if---WttPdq~isl~~ra~~~avina~Gn~Gsa~sP~~iG~lkd~tG 397 (412)
T TIGR02332 347 SFSAMAIF---WTTPDQVISLRARAVAIAVINAVGNVGSALSPLLIGILKDLTG 397 (412)
T ss_pred HHHHHHHE---ECCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
T ss_conf 24443210---2077621211244545444341032124677999999874024