HHsearch alignment for GI: 254780968 and conserved domain: cd02989
>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif. The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.
Probab=96.84 E-value=0.0039 Score=39.69 Aligned_cols=75 Identities=17% Similarity=0.222 Sum_probs=50.3
Q ss_pred HHHHHHHHHHCC-EEEEECCCCCCCCCCHHHHHHHHHHHC-----CCCEEEEECCCCHHHHHHHHHHHCCCCCCE--EEE
Q ss_conf 999999964489-799944899989983179999999974-----996589971144037999999734787763--898
Q gi|254780968|r 6 NSIIQNEIKKND-VVLFMKGTPTSPRCGFSGKVVQVLDSL-----GVSYKGIDVLADDALRQSIKEYSNWPTIPQ--LYV 77 (106)
Q Consensus 6 ~~~i~~~i~~~~-Vvifskgt~~~p~C~~c~~ak~lL~~~-----~i~y~~~dv~~d~~~~~~l~~~sg~~TvPq--IFv 77 (106)
T Consensus 12 e~ef~e~i~~~~~VVV~F----ya~wc~~Ck~l~p~l~~lA~~~~~v~F~kvn~d~~p~i~----~~~~I~~lPT~~~fk 83 (113)
T cd02989 12 EKEFFEIVKSSERVVCHF----YHPEFFRCKIMDKHLEILAKKHLETKFIKVNAEKAPFLV----EKLNIKVLPTVILFK 83 (113)
T ss_pred HHHHHHHHCCCCCEEEEE----ECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHH----HHCCCCCCCEEEEEE
T ss_conf 999999864799799999----899996678889999999997879759999846797789----986987588899999
Q ss_pred CCEEEC---CHHHH
Q ss_conf 998942---76999
Q gi|254780968|r 78 KGDFIG---GCDIV 88 (106)
Q Consensus 78 ~G~~IG---G~d~l 88 (106)
T Consensus 84 ~G~~vd~ivGf~~~ 97 (113)
T cd02989 84 NGKTVDRIVGFEEL 97 (113)
T ss_pred CCEEEEEEECCHHC
T ss_conf 99998999994214