HHsearch alignment for GI: 254780968 and conserved domain: cd02994
>cd02994 PDI_a_TMX PDIa family, TMX subfamily; composed of proteins similar to the TRX-related human transmembrane protein, TMX. TMX is a type I integral membrane protein; the N-terminal redox active TRX domain is present in the endoplasmic reticulum (ER) lumen while the C-terminus is oriented towards the cytoplasm. It is expressed in many cell types and its active site motif (CPAC) is unique. In vitro, TMX reduces interchain disulfides of insulin and renatures inactive RNase containing incorrect disulfide bonds. The C. elegans homolog, DPY-11, is expressed only in the hypodermis and resides in the cytoplasm. It is required for body and sensory organ morphogeneis. Another uncharacterized TRX-related transmembrane protein, human TMX4, is included in the alignment. The active site sequence of TMX4 is CPSC.
Probab=97.09 E-value=0.0015 Score=42.14 Aligned_cols=68 Identities=18% Similarity=0.283 Sum_probs=41.7
Q ss_pred HHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHC-------CCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCE--
Q ss_conf 99964489799944899989983179999999974-------996589971144037999999734787763898998--
Q gi|254780968|r 10 QNEIKKNDVVLFMKGTPTSPRCGFSGKVVQVLDSL-------GVSYKGIDVLADDALRQSIKEYSNWPTIPQLYVKGD-- 80 (106)
Q Consensus 10 ~~~i~~~~Vvifskgt~~~p~C~~c~~ak~lL~~~-------~i~y~~~dv~~d~~~~~~l~~~sg~~TvPqIFv~G~-- 80 (106)
T Consensus 12 ~~~~~g~~lV~F-----yApWC~~Ck~l~P~~e~la~~~~~~~v~i~~vD~~~~~~l~~~~~-I~~~PTi-~~~~~G~~~ 84 (101)
T cd02994 12 TLVLEGEWMIEF-----YAPWCPACQQLQPEWEEFADWSDDLGINVAKVDVTQEPGLSGRFF-VTALPTI-YHAKDGVFR 84 (101)
T ss_pred HHHHCCCEEEEE-----ECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCC-EEEEEEE-EEEECCCEE
T ss_conf 988389889999-----899873577774899999986467877999901755965785478-0784189-998199386
Q ss_pred -EECC
Q ss_conf -9427
Q gi|254780968|r 81 -FIGG 84 (106)
Q Consensus 81 -~IGG 84 (106)
T Consensus 85 ~y~G~ 89 (101)
T cd02994 85 RYQGP 89 (101)
T ss_pred EEECC
T ss_conf 61479