HHsearch alignment for GI: 254780968 and conserved domain: cd02997
>cd02997 PDI_a_PDIR PDIa family, PDIR subfamily; composed of proteins similar to human PDIR (for Protein Disulfide Isomerase Related). PDIR is composed of three redox active TRX (a) domains and an N-terminal redox inactive TRX-like (b) domain. Similar to PDI, it is involved in oxidative protein folding in the endoplasmic reticulum (ER) through its isomerase and chaperone activities. These activities are lower compared to PDI, probably due to PDIR acting only on a subset of proteins. PDIR is preferentially expressed in cells actively secreting proteins and its expression is induced by stress. Similar to PDI, the isomerase and chaperone activities of PDIR are independent; CXXC mutants lacking isomerase activity retain chaperone activity.
Probab=96.17 E-value=0.017 Score=35.92 Aligned_cols=68 Identities=24% Similarity=0.481 Sum_probs=39.1
Q ss_pred HHHHHHHHCC-E-EEEECCCCCCCCCCHHHHHHHHHHHC--------CCCEEEEECCCCHHHHHHHHH---HHCCCCCCE
Q ss_conf 9999964489-7-99944899989983179999999974--------996589971144037999999---734787763
Q gi|254780968|r 8 IIQNEIKKND-V-VLFMKGTPTSPRCGFSGKVVQVLDSL--------GVSYKGIDVLADDALRQSIKE---YSNWPTIPQ 74 (106)
Q Consensus 8 ~i~~~i~~~~-V-vifskgt~~~p~C~~c~~ak~lL~~~--------~i~y~~~dv~~d~~~~~~l~~---~sg~~TvPq 74 (106)
T Consensus 9 nF~~~i~~~~~vlV~F-----yA~WC~~Ck~~~P~~~~~a~~~~~~~~~~~~~vd~~~~~--~~~l~~~~~V~~~PTi-~ 80 (104)
T cd02997 9 DFRKFLKKEKHVLVMF-----YAPWCGHCKKMKPEFTKAATELKEDGKGVLAAVDCTKPE--HDALKEEYNVKGFPTF-K 80 (104)
T ss_pred HHHHHHHCCCCEEEEE-----ECCCCHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCCCC--CHHHHHHCCCCCCCEE-E
T ss_conf 7999984699899999-----889981111567649999999755588799999756300--7878865464558789-9
Q ss_pred EEECCEEEC
Q ss_conf 898998942
Q gi|254780968|r 75 LYVKGDFIG 83 (106)
Q Consensus 75 IFv~G~~IG 83 (106)
T Consensus 81 ~f~~G~~~~ 89 (104)
T cd02997 81 YFENGKFVE 89 (104)
T ss_pred EEECCEEEE
T ss_conf 998994967