HHsearch alignment for GI: 254780968 and conserved domain: pfam00085

>pfam00085 Thioredoxin Thioredoxin. Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise.
Probab=96.17  E-value=0.0063  Score=38.47  Aligned_cols=68  Identities=15%  Similarity=0.324  Sum_probs=39.7

Q ss_pred             HHHHHHH--CCEEEEECCCCCCCCCCHHHHHHHHHHHCCC------CEEEEECCCCHHHHHHHHHHHCCCCCCEE--EEC
Q ss_conf             9999644--8979994489998998317999999997499------65899711440379999997347877638--989
Q gi|254780968|r    9 IQNEIKK--NDVVLFMKGTPTSPRCGFSGKVVQVLDSLGV------SYKGIDVLADDALRQSIKEYSNWPTIPQL--YVK   78 (106)
Q Consensus         9 i~~~i~~--~~Vvifskgt~~~p~C~~c~~ak~lL~~~~i------~y~~~dv~~d~~~~~~l~~~sg~~TvPqI--Fv~   78 (106)
T Consensus        10 F~~~v~~~~k~vlv~F----~a~wC~~C~~~~~~~~~~a~~~~~~~~~~~vd~d~~~~----~~~~~~i~~~Pti~~~~~   81 (104)
T pfam00085        10 FDEEVAKSDKPVLVDF----YAPWCGPCKALAPEYEKLAQEYKDDVKFAKVDADENPD----LASEYGVRGFPTIKFFKN   81 (104)
T ss_pred             HHHHHHHCCCCEEEEE----ECCCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCHH----HHHCCCCEECCEEEEEEC
T ss_conf             8999860899499999----89998504510704444222221101220014654853----532479625090899989


Q ss_pred             CEEECC
Q ss_conf             989427
Q gi|254780968|r   79 GDFIGG   84 (106)
Q Consensus        79 G~~IGG   84 (106)
T Consensus        82 G~~v~~   87 (104)
T pfam00085        82 GKKVSD   87 (104)
T ss_pred             CEEEEE
T ss_conf             959888