HHsearch alignment for GI: 254780968 and conserved domain: pfam00085
>pfam00085 Thioredoxin Thioredoxin. Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise.
Probab=96.17 E-value=0.0063 Score=38.47 Aligned_cols=68 Identities=15% Similarity=0.324 Sum_probs=39.7
Q ss_pred HHHHHHH--CCEEEEECCCCCCCCCCHHHHHHHHHHHCCC------CEEEEECCCCHHHHHHHHHHHCCCCCCEE--EEC
Q ss_conf 9999644--8979994489998998317999999997499------65899711440379999997347877638--989
Q gi|254780968|r 9 IQNEIKK--NDVVLFMKGTPTSPRCGFSGKVVQVLDSLGV------SYKGIDVLADDALRQSIKEYSNWPTIPQL--YVK 78 (106)
Q Consensus 9 i~~~i~~--~~Vvifskgt~~~p~C~~c~~ak~lL~~~~i------~y~~~dv~~d~~~~~~l~~~sg~~TvPqI--Fv~ 78 (106)
T Consensus 10 F~~~v~~~~k~vlv~F----~a~wC~~C~~~~~~~~~~a~~~~~~~~~~~vd~d~~~~----~~~~~~i~~~Pti~~~~~ 81 (104)
T pfam00085 10 FDEEVAKSDKPVLVDF----YAPWCGPCKALAPEYEKLAQEYKDDVKFAKVDADENPD----LASEYGVRGFPTIKFFKN 81 (104)
T ss_pred HHHHHHHCCCCEEEEE----ECCCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCHH----HHHCCCCEECCEEEEEEC
T ss_conf 8999860899499999----89998504510704444222221101220014654853----532479625090899989
Q ss_pred CEEECC
Q ss_conf 989427
Q gi|254780968|r 79 GDFIGG 84 (106)
Q Consensus 79 G~~IGG 84 (106)
T Consensus 82 G~~v~~ 87 (104)
T pfam00085 82 GKKVSD 87 (104)
T ss_pred CEEEEE
T ss_conf 959888