HHsearch results for GI: 254780968 and protein with PDBid: 1syr_A

>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum 3D7} SCOP: c.47.1.1
Probab=97.55  E-value=0.00039  Score=44.24  Aligned_cols=73  Identities=15%  Similarity=0.316  Sum_probs=47.5

Q ss_pred             HHHHHHHHHHCCEE-EEECCCCCCCCCCHHHHHHHHHHHC-----CCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf             99999996448979-9944899989983179999999974-----99658997114403799999973478776389899
Q gi|254780968|r    6 NSIIQNEIKKNDVV-LFMKGTPTSPRCGFSGKVVQVLDSL-----GVSYKGIDVLADDALRQSIKEYSNWPTIPQLYVKG   79 (106)
Q Consensus         6 ~~~i~~~i~~~~Vv-ifskgt~~~p~C~~c~~ak~lL~~~-----~i~y~~~dv~~d~~~~~~l~~~sg~~TvPqIFv~G   79 (106)
                      ++..++.+++++.+ |+-    +.|||+.|..++..|.+.     ++.+..+|++.++++.+.+. ..+.||+ .+|.+|
T Consensus        16 ~~ef~~~l~~~~~vvv~F----~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~-V~~~PTi-~~~k~G   89 (112)
T 1syr_A           16 QAEFDSIISQNELVIVDF----FAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVSEVTEKEN-ITSMPTF-KVYKNG   89 (112)
T ss_dssp             HHHHHHHHHHCSEEEEEE----ECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTTHHHHHHTT-CCSSSEE-EEEETT
T ss_pred             HHHHHHHHHCCCCEEEEE----ECCCCCCHHHCCCCCHHHHHCCCCCEEEECCCCCCHHHHHHCC-CEEECEE-EEEECC
T ss_conf             999999982899799999----8999855441376410122116751267524533899999869-9184669-999899


Q ss_pred             EEECC
Q ss_conf             89427
Q gi|254780968|r   80 DFIGG   84 (106)
Q Consensus        80 ~~IGG   84 (106)
                      +.++.
T Consensus        90 ~~v~~   94 (112)
T 1syr_A           90 SSVDT   94 (112)
T ss_dssp             EEEEE
T ss_pred             EEEEE
T ss_conf             99999