HHsearch results for GI: 254780968 and protein with PDBid: 1syr_A
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum 3D7} SCOP: c.47.1.1
Probab=97.55 E-value=0.00039 Score=44.24 Aligned_cols=73 Identities=15% Similarity=0.316 Sum_probs=47.5
Q ss_pred HHHHHHHHHHCCEE-EEECCCCCCCCCCHHHHHHHHHHHC-----CCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 99999996448979-9944899989983179999999974-----99658997114403799999973478776389899
Q gi|254780968|r 6 NSIIQNEIKKNDVV-LFMKGTPTSPRCGFSGKVVQVLDSL-----GVSYKGIDVLADDALRQSIKEYSNWPTIPQLYVKG 79 (106)
Q Consensus 6 ~~~i~~~i~~~~Vv-ifskgt~~~p~C~~c~~ak~lL~~~-----~i~y~~~dv~~d~~~~~~l~~~sg~~TvPqIFv~G 79 (106)
++..++.+++++.+ |+- +.|||+.|..++..|.+. ++.+..+|++.++++.+.+. ..+.||+ .+|.+|
T Consensus 16 ~~ef~~~l~~~~~vvv~F----~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~-V~~~PTi-~~~k~G 89 (112)
T 1syr_A 16 QAEFDSIISQNELVIVDF----FAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVSEVTEKEN-ITSMPTF-KVYKNG 89 (112)
T ss_dssp HHHHHHHHHHCSEEEEEE----ECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTTHHHHHHTT-CCSSSEE-EEEETT
T ss_pred HHHHHHHHHCCCCEEEEE----ECCCCCCHHHCCCCCHHHHHCCCCCEEEECCCCCCHHHHHHCC-CEEECEE-EEEECC
T ss_conf 999999982899799999----8999855441376410122116751267524533899999869-9184669-999899
Q ss_pred EEECC
Q ss_conf 89427
Q gi|254780968|r 80 DFIGG 84 (106)
Q Consensus 80 ~~IGG 84 (106)
+.++.
T Consensus 90 ~~v~~ 94 (112)
T 1syr_A 90 SSVDT 94 (112)
T ss_dssp EEEEE
T ss_pred EEEEE
T ss_conf 99999