HHsearch alignment for GI: 254780969 and conserved domain: COG5007
>COG5007 Predicted transcriptional regulator, BolA superfamily [Transcription].
Probab=99.89 E-value=6.7e-23 Score=147.04 Aligned_cols=73 Identities=40% Similarity=0.723 Sum_probs=70.1
Q ss_pred CCHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHC-CCEEEEEEEECCCCC
Q ss_conf 7889999999821996679999748999669999970466899978999999999998727-972688988206788
Q gi|254780969|r 3 MNPHEIEKMIKKGIPQSIVTIHDLAGDGNHYAAEIISEEFRGKNRIQQHQMVYDSLGNKMG-NALHALSIKTSVPDS 78 (79)
Q Consensus 3 m~~~~I~~~i~~~l~~~~v~V~d~sg~~~Hf~i~VvS~~F~g~s~i~rhr~Vy~~L~~~i~-~~IHAlsikt~tpee 78 (79)
T Consensus 1 M~~e~Ik~ll~~~L~~e~v~V~---Gdg~Hf~vi~Vs~~F~g~srvkrqq~vYApL~~~i~~~~IHAlsikt~Tp~e 74 (80)
T COG5007 1 MDNEEIKSLLENALPLEEVEVE---GDGSHFQVIAVSEEFAGKSRVKRQQLVYAPLMAYIADNEIHALSIKTYTPAE 74 (80)
T ss_pred CCHHHHHHHHHHCCCCCEEEEE---CCCCEEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHH
T ss_conf 9879999999822885278996---2772489988648666723778788889989988512852788865158889