HHsearch alignment for GI: 254780969 and conserved domain: COG5007

>COG5007 Predicted transcriptional regulator, BolA superfamily [Transcription].
Probab=99.89  E-value=6.7e-23  Score=147.04  Aligned_cols=73  Identities=40%  Similarity=0.723  Sum_probs=70.1

Q ss_pred             CCHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHC-CCEEEEEEEECCCCC
Q ss_conf             7889999999821996679999748999669999970466899978999999999998727-972688988206788
Q gi|254780969|r    3 MNPHEIEKMIKKGIPQSIVTIHDLAGDGNHYAAEIISEEFRGKNRIQQHQMVYDSLGNKMG-NALHALSIKTSVPDS   78 (79)
Q Consensus         3 m~~~~I~~~i~~~l~~~~v~V~d~sg~~~Hf~i~VvS~~F~g~s~i~rhr~Vy~~L~~~i~-~~IHAlsikt~tpee   78 (79)
T Consensus         1 M~~e~Ik~ll~~~L~~e~v~V~---Gdg~Hf~vi~Vs~~F~g~srvkrqq~vYApL~~~i~~~~IHAlsikt~Tp~e   74 (80)
T COG5007           1 MDNEEIKSLLENALPLEEVEVE---GDGSHFQVIAVSEEFAGKSRVKRQQLVYAPLMAYIADNEIHALSIKTYTPAE   74 (80)
T ss_pred             CCHHHHHHHHHHCCCCCEEEEE---CCCCEEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHH
T ss_conf             9879999999822885278996---2772489988648666723778788889989988512852788865158889