HHsearch alignment of GI: 254780969 and MMDB domain: 1ny8_A_

>1ny8_A (A:) Protein YRBA; structure, autoassign, autostructure, NESG, structural genomics, PSI, protein structure initiative; NMR {Escherichia coli}

Probab=99.92  E-value=9e-26  Score=162.50  Aligned_cols=75  Identities=29%  Similarity=0.527  Sum_probs=71.3

Q ss_pred             CCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHC-CCEEEEEEEECCCCC
Q ss_conf             977889999999821996679999748999669999970466899978999999999998727-972688988206788
Q gi|254780969|r    1 MSMNPHEIEKMIKKGIPQSIVTIHDLAGDGNHYAAEIISEEFRGKNRIQQHQMVYDSLGNKMG-NALHALSIKTSVPDS   78 (79)
Q Consensus         1 M~m~~~~I~~~i~~~l~~~~v~V~d~sg~~~Hf~i~VvS~~F~g~s~i~rhr~Vy~~L~~~i~-~~IHAlsikt~tpee   78 (79)
                      |.|.+++|+++|++.||++.++|.|   ||+||+|+|||+.|+|+|+|+|||+||++|+++|+ +.||||+|+|+||+|
T Consensus         4 ~~~~~~~I~~~L~~~l~~~~v~V~g---d~~hf~i~IvS~~F~Gks~v~RhrlVy~~L~~~i~~g~IHAlsi~t~tp~E   79 (97)
T 1ny8_A            4 DPMENNEIQSVLMNALSLQEVHVSG---DGSHFQVIAVGELFDGMSRVKKQQTVYGPLMEYIADNRIHAVSIKAYTPAE   79 (97)
T ss_dssp             CCCCCHHHHHHHHHHHCCSEEEEEE---SSSEEEEEEESSTTSSSCHHHHHHHHHTTTHHHHHHHTTSEEEEEECCHHH
T ss_pred             CCCCHHHHHHHHHHHCCCCEEEEEC---CCCEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHH
T ss_conf             7578999999999539981899968---984899999807768998899999999999998658972433868389999